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<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZN48</accession>
    <name>A0A0M6ZN48_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Stalked cell differentiation-controlling protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">pleD_1</name>
        <name evidence="3" type="ORF">LAX5112_00020</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63652.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670084.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ63652">
        <property type="protein sequence ID" value="CTQ63652"/>
        <property type="gene ID" value="LAX5112_00020"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01949">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000160">
        <property type="entry name" value="GGDEF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00990">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00267">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00254">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50887">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="196"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="domain" description="GGDEF" evidence="2">
        <location>
            <begin position="262"/>
            <end position="394"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ63652.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="409" mass="45915" checksum="9057914E8F6C58B3" modified="2015-12-09" version="1">MNVTRLYEQHRYTLLAAAAGTLALIGMVWIALDTLIDWQVREAIKRNAEERALNWSHNFLETTPSAIELIQTGKGDMDDINRLEDSFALVNIIRFQLFDEEGRQTFLSNGSLDRDSNYGDAPNENAVRAFETGQPVIEVHHDDNDERTDGDPRVPETYIEAYVPAITASGEKVGTIELYVDASAFEEALEETFQEVSIYLVAGTVLVLLFPIAAFVRRTQQLMQNDKRMLELTRYDQLTGVFNRNSTTQHLKALFIDPDRAAGTGILFVDVDYFKQVNDKYGHACGDILLKHIADVLKSSIRLKDDVVGRYGGDEFVILCRNITKDDFRRLSQRVMEGAKTPCSHEGNSYTPSLSVGAYLSRDGDTEDLALHRADLAVYAAKRGGRNQVVEFSEDLEGLFKNDEAQKSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZNK7</accession>
    <name>A0A0M6ZNK7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Rut operon repressor</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">rutR_1</name>
        <name evidence="3" type="ORF">LAX5112_00262</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64338.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670245.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00262"/>
    <dbReference type="EnsemblBacteria" id="CTQ64338">
        <property type="protein sequence ID" value="CTQ64338"/>
        <property type="gene ID" value="LAX5112_00262"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045892">
        <property type="term" value="P:negative regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036271">
        <property type="entry name" value="Tet_transcr_reg_TetR-rel_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013573">
        <property type="entry name" value="Tscrpt_reg_YcdC_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08362">
        <property type="entry name" value="TetR_C_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00440">
        <property type="entry name" value="TetR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00455">
        <property type="entry name" value="HTHTETR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48498">
        <property type="entry name" value="SSF48498"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50977">
        <property type="entry name" value="HTH_TETR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH tetR-type" evidence="2">
        <location>
            <begin position="6"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="1">
        <location>
            <begin position="29"/>
            <end position="48"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ64338.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="210" mass="23520" checksum="FA30CE0F2AF88778" modified="2015-12-09" version="1">MSRIQEKNRTLILDAALKEFSRYGFSGATVERIAAEAGMSKSNLLYYFSSKEAIYTAALAHILDVWLAPLKTLDREGDPATELAAYIRQKIEISANFPEASRLFANEVMQGAPQILPILETELRRLVAEKVAVIESWIADGKINKTEPLHLIFSIWATTQHYADFAVQIRALTGHDLSDEDFKRETERAVTQQILASVGLRLPEETPETA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPB4</accession>
    <name>A0A0M6ZPB4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Cysteine desulfurase</fullName>
            <ecNumber evidence="5">2.8.1.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">nifS</name>
        <name evidence="13" type="ORF">LAX5112_00150</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Seems to participate in the biosynthesis of the nitrogenase metalloclusters by providing the inorganic sulfur required for the Fe-S core formation.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>[sulfur carrier]-H + L-cysteine = [sulfur carrier]-SH + L-alanine</text>
            <dbReference type="Rhea" id="RHEA:43892"/>
            <dbReference type="Rhea" id="RHEA-COMP:14737"/>
            <dbReference type="Rhea" id="RHEA-COMP:14739"/>
            <dbReference type="ChEBI" id="CHEBI:29917"/>
            <dbReference type="ChEBI" id="CHEBI:35235"/>
            <dbReference type="ChEBI" id="CHEBI:57972"/>
            <dbReference type="ChEBI" id="CHEBI:64428"/>
            <dbReference type="EC" id="2.8.1.7"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.8.1.7" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64016.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670170.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00150"/>
    <dbReference type="EnsemblBacteria" id="CTQ64016">
        <property type="protein sequence ID" value="CTQ64016"/>
        <property type="gene ID" value="LAX5112_00150"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051537">
        <property type="term" value="F:2 iron, 2 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031071">
        <property type="term" value="F:cysteine desulfurase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044571">
        <property type="term" value="P:[2Fe-2S] cluster assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000192">
        <property type="entry name" value="Aminotrans_V_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010240">
        <property type="entry name" value="Cys_deSase_IscS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016454">
        <property type="entry name" value="Cysteine_dSase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11601:SF34">
        <property type="entry name" value="PTHR11601:SF34"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00266">
        <property type="entry name" value="Aminotran_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005572">
        <property type="entry name" value="NifS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0001">2Fe-2S</keyword>
    <keyword evidence="10" id="KW-0408">Iron</keyword>
    <keyword evidence="11" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="13" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Aminotran_5" evidence="12">
        <location>
            <begin position="8"/>
            <end position="369"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001357"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00003120"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00006490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00013558"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022714"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF00266"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="CTQ64016.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="389" mass="40948" checksum="BCCBC4A28144F30D" modified="2015-12-09" version="1">MSRRSEPVYLDHNAGAPMRPDVRDAMITVLLDAGNASSVHTHGRKARGRIEEAREAVARLCGAKTRAVTFVSGGTEANMTALAPAWQDQGTPFYVDKLFRSAIEHPSVVTGGRFPVMDQAVVPVDSHGVVDLGALEDLIKDAAPSLISVMAANNETGVIEPLSDIAALAAKYGHFFHADAVQAAGRMPIDIEAWGADVITLSAHKFGGPQGMGAVVVRSTARVPAPLMVGGGQENWRRGGTENVSAIAGFGIAAKAALEDAADTSHFSALREKLEDGLRAVCPETVIFGEGTDRLVNTVCFAVPGVAAETALIAFDLERVSVSSGSACSSGKVSVSHVLTAMGVDEDTARGALRISMGWDTGTQEIERFLEVWPKIVDRLNPEARNKAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPK2</accession>
    <name>A0A0M6ZPK2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">pdhS</name>
        <name evidence="8" type="ORF">LAX5112_00371</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
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        <property type="protein sequence ID" value="CTQ64699.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
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        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
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    <dbReference type="EnsemblBacteria" id="CTQ64699">
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        <property type="gene ID" value="LAX5112_00371"/>
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    <dbReference type="Proteomes" id="UP000053235">
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
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    <dbReference type="GO" id="GO:0006355">
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
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        <property type="match status" value="1"/>
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        <property type="match status" value="1"/>
    </dbReference>
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    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
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    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
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        <property type="entry name" value="HisK_dim/P_sf"/>
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    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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    <keyword evidence="8" id="KW-0418">Kinase</keyword>
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    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0808">Transferase</keyword>
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        <location>
            <begin position="1049"/>
            <end position="1119"/>
        </location>
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        <location>
            <begin position="1194"/>
            <end position="1413"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="297"/>
            <end position="349"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="481"/>
            <end position="535"/>
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    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
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        </location>
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    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="645"/>
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        </location>
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    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="685"/>
            <end position="765"/>
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    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="881"/>
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        </location>
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            <begin position="1164"/>
            <end position="1194"/>
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        <location>
            <begin position="483"/>
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        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
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        <location>
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            <dbReference type="ARBA" id="ARBA00022553"/>
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        <source>
            <dbReference type="SAM" id="Coils"/>
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        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
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        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="PROSITE" id="PS50112"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="EMBL" id="CTQ64699.1"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="1417" mass="151978" checksum="59C2D3D9B2117ABE" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQI1</accession>
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        <name evidence="1" type="ORF">LAX5112_00320</name>
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        <name type="scientific">Roseibium alexandrii</name>
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        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
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            <strain evidence="2">CECT 5112</strain>
        </source>
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            <dbReference type="EMBL" id="CTQ64502.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="359" mass="39678" checksum="16268E71F86AA5F8" modified="2015-12-09" version="1">MGLFDRSLSPPQQLPAAVIVDIQDIPIEKRHPFFLWLAEEIRTLPCDVPLYILTGSEDEPVDGLRPMAILERSVPDDILVMLICIHQRALLRSEEARIRRRIFGRIPGFGAAPHYTGGSGLMVVGVSGRFLEWQAASSHNVEVVGAFDGGMATEFMAQRAFDAVVIDSTSEDTIDYMQQIRRDARFASLPVLAVCEDPEDVVGLFRNGASDVLLGRNRPETLNRRLASAIRLGKRRRLADRVLSESHMWLQQQITVGGLDCDLYDHYLETAANAMAARGLDLWEMRLSPENFNIPASTAEDLAELNGTLLSVADATSRDEDLVCLVRGLGPVAVLKNEAGTLRLQKRINSILAHTVMAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
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    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
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            <strain evidence="4">CECT 5112</strain>
        </source>
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            <begin position="31"/>
            <end position="127"/>
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    </feature>
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            <begin position="106"/>
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        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
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            <begin position="106"/>
            <end position="120"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
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            <dbReference type="SAM" id="MobiDB-lite"/>
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            <dbReference type="Pfam" id="PF09361"/>
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    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ64696.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="128" mass="14130" checksum="E214B5E7AEE924BC" modified="2015-12-09" version="1">MTADKTGFEVPEQMRDFAEKSVDQARKAFDDFMGATHKAVSNVEESANVVQAEAADVNKKALGYAEEHVDAAFKFAQELVKASNVEDMMKLQQDYLRTQMESLGEQAREFSNSATKAVSEATKAAQKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZR95</accession>
    <name>A0A0M6ZR95_9HYPH</name>
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        <submittedName>
            <fullName evidence="3">Iron-sulfur cluster assembly protein</fullName>
        </submittedName>
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        <name evidence="3" type="primary">iscA</name>
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        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
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        <text evidence="1">Belongs to the HesB/IscA family.</text>
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        <property type="entry name" value="HesB-like_dom_sf"/>
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    </dbReference>
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    </dbReference>
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    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Fe-S_biosyn" evidence="2">
        <location>
            <begin position="10"/>
            <end position="111"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006718"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01521"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ64034.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="126" mass="13263" checksum="E76DE84744E3AFCC" modified="2015-12-09" version="1">MASASKFQVMTLTDAAAERVCELVVNADKPALGLRVGIKKGGCAGMEYAMDLVEEASPGDDVIEDKGAKIFVDPSAVLFLLGTEMDFEVTKFRSGFIFKNPNEVSACGCGESVSLQAADLGAHARN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZS64</accession>
    <name>A0A0M6ZS64_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Hemin import ATP-binding protein HmuV</fullName>
            <ecNumber evidence="5">3.6.3.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">hmuV</name>
        <name evidence="5" type="ORF">LAX5112_00698</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.6.3.-" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65619.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670637.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00698"/>
    <dbReference type="EnsemblBacteria" id="CTQ65619">
        <property type="protein sequence ID" value="CTQ65619"/>
        <property type="gene ID" value="LAX5112_00698"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="18"/>
            <end position="257"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="50"/>
            <end position="57"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ65619.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="299" mass="32381" checksum="154E7DE4E5690C4B" modified="2015-12-09" version="1">MSNHSVLTQNVAAPVKSLDVRDVKVTLGSSCIVNDMSFNVYAGELLAIIGPSGSGKTTLLKAITGERPYSGSIQLGGHEVASLSPEAQALARGVLPQASHLSFPLTVSEVIGLGILDRRQGRLARAHRIAEALALVGLPGFEARTYQDLSGGEQQRAHLARVICQVWDPVAADGTPRWLFLDEPVSSLDIKHQYQIMKLAKDYARRGGGVIAVMHDLNLTAAFADKILVMKNGSKVRHGSLEDVFSEKTLTPTFEMPLEITRSKEGRFQVTPQLAELIWYSEAHAESTTPQHQAPLFPG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSC4</accession>
    <name>A0A0M6ZSC4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">kinD</name>
        <name evidence="5" type="ORF">LAX5112_00472</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64990.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00472"/>
    <dbReference type="EnsemblBacteria" id="CTQ64990">
        <property type="protein sequence ID" value="CTQ64990"/>
        <property type="gene ID" value="LAX5112_00472"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Histidine kinase" evidence="4">
        <location>
            <begin position="262"/>
            <end position="466"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ64990.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="472" mass="51037" checksum="C6DCC5890D8564A9" modified="2015-12-09" version="1">MASVVMLFAVVLTIFGLQELERREAELRVEVGGAFLDTLAGLITPAVTAGAPLSEIEGLLSASARFKPSLRNEAVAVCCLADGPILMTSSYPDDPTNGAKPRTTELALEDWLNANRSLPPNEAAIQNVDETNKQLIAQSFPVSDGSTILLGAAFDLEWQRSEQEERRRVALAVDVAFSVLAAILTFFVAQHSLRPIDDLTKALDDDSFDTQTEVEPASANTEIGRLQNALRTRAELQARADAIAKTENKHAREATLARLAAGLAHEVRNPLAGMSAATSTLRRFGDDTTVREQTIDLIDRGLQSIDHVAASMLSTYRPPEGNRDLKPDDLNDLRTLINPKVRAKQVDLSFQSELAETYPASAEAVRQIVLNLLLNAIDATPVGSTVAFESKLIEEQLTIKVSDSGPGLPGEALNVLTGGTTTEKPQTRRLGLWLVHQLIDDVNGRLAISTRPQSGTVITITIPKRTDEAENV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZT63</accession>
    <name>A0A0M6ZT63_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative amino-acid metabolite efflux pump</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">eamA_1</name>
        <name evidence="3" type="ORF">LAX5112_00338</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64613.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670332.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00338"/>
    <dbReference type="EnsemblBacteria" id="CTQ64613">
        <property type="protein sequence ID" value="CTQ64613"/>
        <property type="gene ID" value="LAX5112_00338"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000620">
        <property type="entry name" value="EamA_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00892">
        <property type="entry name" value="EamA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="18"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="47"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="77"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="105"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="133"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="162"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="196"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="226"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="258"/>
            <end position="276"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="282"/>
            <end position="300"/>
        </location>
    </feature>
    <feature type="domain" description="EamA" evidence="2">
        <location>
            <begin position="23"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="domain" description="EamA" evidence="2">
        <location>
            <begin position="165"/>
            <end position="300"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ64613.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="303" mass="32413" checksum="B150E66D5078614A" modified="2015-12-09" version="1">MSIAQPTLNRSGMDSTDLGLYAATVFAWGFSWIAMKGQISGVAPEVSVFWRFVVAAAMMMAWVRMRGYSLTFPLKDHIRFAGLGALLFSTNFTLFYYGAASLPSGLLAVVFSTASVFNVFLGLVLFRQRPSKLTLAAGFLGIAGIALMFLPEMAGTQIDTSVAIGLGFCICGTLSFCFGNMLSADTQRRGIGVMPATAWGMIYGMIFLGLFSAIRSQSFAVDWTLPYIGSLIYLALVASVIAFASYLTLLGRIGSARAGYATVLFPIVALALSTIFEGYQWTPLAIGGLACVLGGNVMMLRAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTF7</accession>
    <name>A0A0M6ZTF7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Glycine betaine transport system permease protein OpuAB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">opuAB_1</name>
        <name evidence="7" type="ORF">LAX5112_00405</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64794.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451484.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00405"/>
    <dbReference type="EnsemblBacteria" id="CTQ64794">
        <property type="protein sequence ID" value="CTQ64794"/>
        <property type="gene ID" value="LAX5112_00405"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017784">
        <property type="entry name" value="ABC_transptr_choline_permease"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03416">
        <property type="entry name" value="ABC_choXWV_perm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="73"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="96"/>
            <end position="119"/>
        </location>
    </feature>
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    <feature type="transmembrane region" description="Helical" evidence="5">
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            <end position="233"/>
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            <end position="268"/>
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            <end position="272"/>
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    <evidence type="ECO:0000256" key="1">
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    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ64794.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="280" mass="30149" checksum="43A4B70094F5170C" modified="2015-12-09" version="1">MNWLTDYKLPIGPWARTMVDWLTDNAYWVFDGISVFLETLIDGILWLLQTPHPLVIVALAAGAGYAVHRKISLAAFIAVSLMLIINQGYWEETTETLALVIAASVVCMAVGIPIGVYGAHNPRFFAAMRPVLDLMQTIPTFVYLIPALILFGLGMVPGLIATVIFAIPAPIRLTQLGVSSTPTALLEAGEAFGATKSQLLWKIELPYALPQIMAGLTQTIMLSLSMVVIAALVGADGLGVPTLRALNTVNIAQGFEVGVCIVLIAIVLDRFFRKEEGGKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTT0</accession>
    <name>A0A0M6ZTT0_9HYPH</name>
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        <submittedName>
            <fullName evidence="5">Neu5Ac permease</fullName>
        </submittedName>
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        <name evidence="5" type="primary">siaT_4</name>
        <name evidence="5" type="ORF">LAX5112_00651</name>
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        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
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            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
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            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
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        <subcellularLocation>
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    </comment>
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    <dbReference type="EnsemblBacteria" id="CTQ65490">
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    </dbReference>
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    </dbReference>
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        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="project" value="UniProtKB-SubCell"/>
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    </dbReference>
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    </dbReference>
    <dbReference type="PANTHER" id="PTHR33362">
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        <property type="match status" value="1"/>
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        <property type="match status" value="1"/>
    </dbReference>
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    </dbReference>
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        <property type="entry name" value="dctM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
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    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="6"/>
            <end position="30"/>
        </location>
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            <end position="190"/>
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    </evidence>
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            <dbReference type="Pfam" id="PF06808"/>
        </source>
    </evidence>
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            <dbReference type="EMBL" id="CTQ65490.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
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    </evidence>
    <sequence length="427" mass="44927" checksum="6BD4E9057C3DFB1C" modified="2015-12-09" version="1">MIVAIAFVVLILFGMPIGFAIGLAGVIGLIDMGGGSFLAIGPSKIFNGLNIFPFLAMPFFILAGEIMNGTGITTRLVKLAQVLVGRFRGGLAHTNMLASVFFAGLTGSATADAAAFGRTLVPAMVKEGYKRDYACAVTAAGSIIGPTIPPSGLMVVYGSLMGVSIAGLFAAGILPGLVICAVCMGVIVVGGKRENLPQALRGASFKEVWKTFVSSLTALAMPVIILGGILGGIVTPTEAASIAVAYALFIGAVVYRTLTFKSFYSMLVRTARITGVIFVIIAFASVLGWWMSFERIPQLMAETVLSLSENRYAVIAIIICLLLIVGMVMDITAILIILAPVLVPLTEQVGLEPIHAGIIFVLALNISLMTPPVGACLFVLSSVTGERLERISVKLMPFLIAEVAILFIFAFWEDAALFLPRLLGFAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUS0</accession>
    <name>A0A0M6ZUS0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Flp pilus assembly protein, secretin CpaC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_00545</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
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    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65203.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
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    </dbReference>
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        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
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    </dbReference>
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    </dbReference>
    <proteinExistence type="predicted"/>
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    <keyword evidence="1" id="KW-0732">Signal</keyword>
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        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005808975" evidence="1">
        <location>
            <begin position="24"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="domain" description="T2SS-T3SS_pil_N" evidence="2">
        <location>
            <begin position="26"/>
            <end position="94"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13629"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ65203.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="153" mass="16388" checksum="CE51D338A799296E" modified="2015-12-09" version="1">MRIQLIRLTLVLLTGAIANTAMADEEPVLVTVDRAKIFQVEDGAAAVIVGNPFIADVAMVDQNTVVITGKSYGTTNLVILDQDNKPIVDEVIQVRASEQGVVSVYRNSARATLSCSPICEPTLRLGDAEETFQNTATQATSRNELAEQAAGNR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUY0</accession>
    <name>A0A0M6ZUY0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Formate dehydrogenase H</fullName>
            <ecNumber evidence="9">1.1.99.33</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">fdhF</name>
        <name evidence="9" type="ORF">LAX5112_00872</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
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            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
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            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <dbReference type="EC" id="1.1.99.33" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000003">
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    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00872"/>
    <dbReference type="EnsemblBacteria" id="CTQ66107">
        <property type="protein sequence ID" value="CTQ66107"/>
        <property type="gene ID" value="LAX5112_00872"/>
    </dbReference>
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    </dbReference>
    <dbReference type="GO" id="GO:0051539">
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
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        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="project" value="InterPro"/>
    </dbReference>
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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    </dbReference>
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    </dbReference>
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    </dbReference>
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    </dbReference>
    <dbReference type="InterPro" id="IPR027467">
        <property type="entry name" value="MopterinOxRdtase_cofactor_BS"/>
    </dbReference>
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    </dbReference>
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    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="Molybdop_Fe4S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50692">
        <property type="entry name" value="SSF50692"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01409">
        <property type="entry name" value="TAT_signal_seq"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51669">
        <property type="entry name" value="4FE4S_MOW_BIS_MGD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00551">
        <property type="entry name" value="MOLYBDOPTERIN_PROK_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
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    <keyword evidence="2 7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4 9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <feature type="domain" description="4Fe-4S Mo/W bis-MGD-type" evidence="8">
        <location>
            <begin position="65"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="72"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="75"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="79"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="107"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51669"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ66107.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="964" mass="106542" checksum="ED05E544EFA171C2" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZV25</accession>
    <name>A0A0M6ZV25_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00605</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65374.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670527.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ65374">
        <property type="protein sequence ID" value="CTQ65374"/>
        <property type="gene ID" value="LAX5112_00605"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009267">
        <property type="entry name" value="NTP_transf_6"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR39166">
        <property type="entry name" value="PTHR39166"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06042">
        <property type="entry name" value="NTP_transf_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ65374.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="218" mass="24788" checksum="2A87A403BF8774B4" modified="2015-12-09" version="1">MLTSITRTKDFSLLADIAKTPELERVQALTNILQEIPRVMDILQCIKDLQIRDGWLVSGGIYQTIWNVITDRPLDHGIKDYDVIYFDGRDLTYEGEDAVIQQVQSALPDLGELVEVRNQARVHLWYEQRFGRPYRPLDCAMDSLTTYAARTHAVAAQLGKDDQICIHAPFGLANIFAMRLVPNYRQPNPETYAEKAARMKALWPELDVIPWDVSAASA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVT3</accession>
    <name>A0A0M6ZVT3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF4150 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01125</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66875.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01125"/>
    <dbReference type="EnsemblBacteria" id="CTQ66875">
        <property type="protein sequence ID" value="CTQ66875"/>
        <property type="gene ID" value="LAX5112_01125"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025425">
        <property type="entry name" value="Tox_PAAR-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13665">
        <property type="entry name" value="DUF4150"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF4150" evidence="1">
        <location>
            <begin position="13"/>
            <end position="113"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13665"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66875.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="134" mass="14103" checksum="702B090069ECD551" modified="2015-12-09" version="1">MVFVNSQGPIPGMDFSVPDIYLQTTPVGPVPIPLFSMGFRVTEIPTCFRSLIMCMPAHNMTNLAPVTVSGPGPGVASGMVCSNSRNVKGSTKLFLQCMPATRALLDPTAQNGVSPNSVGTTLVPSQIRLLNPSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVU2</accession>
    <name>A0A0M6ZVU2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Tetratricopeptide repeat protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01129</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66885.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670985.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ66885">
        <property type="protein sequence ID" value="CTQ66885"/>
        <property type="gene ID" value="LAX5112_01129"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="SSF48452"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ66885.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="631" mass="67586" checksum="B576EFA5450702B6" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZW80</accession>
    <name>A0A0M6ZW80_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Inner membrane protein YrbG</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">yrbG_1</name>
        <name evidence="7" type="ORF">LAX5112_00995</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66511.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ66511">
        <property type="protein sequence ID" value="CTQ66511"/>
        <property type="gene ID" value="LAX5112_00995"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1420.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004481">
        <property type="entry name" value="K/Na/Ca-exchanger"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004837">
        <property type="entry name" value="NaCa_Exmemb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044880">
        <property type="entry name" value="NCX_ion-bd_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10846">
        <property type="entry name" value="PTHR10846"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01699">
        <property type="entry name" value="Na_Ca_ex"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00367">
        <property type="entry name" value="TIGR00367"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="29"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="78"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="105"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="127"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="182"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="220"/>
            <end position="243"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="255"/>
            <end position="274"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="286"/>
            <end position="304"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="311"/>
            <end position="326"/>
        </location>
    </feature>
    <feature type="domain" description="Na_Ca_ex" evidence="6">
        <location>
            <begin position="8"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="domain" description="Na_Ca_ex" evidence="6">
        <location>
            <begin position="186"/>
            <end position="325"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF01699"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ66511.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="328" mass="33279" checksum="21E5EB213A63B599" modified="2015-12-09" version="1">MFEIAVPLIGGLVLLIVGGEFLVRGAVNAATHLGVSPLVIGLTLVGFGTSTPELVTSVHAALVGAPGIAFGNVVGSNIANILLIGGVAALLFPIAVSSMALKRDAAVMLAVTLVFAGIVTVMDASRLVGGVFLAALCSYIYLAIRQERAAVQENRGAVHGKSTALIETDPVLDIPAQPKGGLVAALLLALGGLALVVFGGKFLVEGAVSLARGFGISETVIGLTIVAIGTSMPELVTSVVAGLKRQTDVAFGNIIGSNIYNILGIGGATALIAPSEVPAQIVSFDNLVMIGVSVIFVIFAATGLRIGRREGAVLLGGYLVYLYALWPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWL4</accession>
    <name>A0A0M6ZWL4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01234</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67148.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671072.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67148">
        <property type="protein sequence ID" value="CTQ67148"/>
        <property type="gene ID" value="LAX5112_01234"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67148.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="560" mass="59189" checksum="6FDE2B13EA10E272" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZX09</accession>
    <name>A0A0M6ZX09_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Redox-sensitive transcriptional activator SoxR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">soxR_2</name>
        <name evidence="8" type="ORF">LAX5112_01306</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67279.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671132.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01306"/>
    <dbReference type="EnsemblBacteria" id="CTQ67279">
        <property type="protein sequence ID" value="CTQ67279"/>
        <property type="gene ID" value="LAX5112_01306"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051537">
        <property type="term" value="F:2 iron, 2 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006979">
        <property type="term" value="P:response to oxidative stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01110">
        <property type="entry name" value="HTH_SoxR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009061">
        <property type="entry name" value="DNA-bd_dom_put_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000551">
        <property type="entry name" value="MerR-type_HTH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010211">
        <property type="entry name" value="Redox-sen_tscrpt-act_SoxR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015358">
        <property type="entry name" value="Tscrpt_reg_MerR_DNA-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30204:SF0">
        <property type="entry name" value="PTHR30204:SF0"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00376">
        <property type="entry name" value="MerR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09278">
        <property type="entry name" value="MerR-DNA-bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00040">
        <property type="entry name" value="HTHMERR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00422">
        <property type="entry name" value="HTH_MERR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46955">
        <property type="entry name" value="SSF46955"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01950">
        <property type="entry name" value="SoxR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00552">
        <property type="entry name" value="HTH_MERR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50937">
        <property type="entry name" value="HTH_MERR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0001">2Fe-2S</keyword>
    <keyword evidence="5" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2" id="KW-0408">Iron</keyword>
    <keyword evidence="3" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0804">Transcription</keyword>
    <keyword evidence="4" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH merR-type" evidence="7">
        <location>
            <begin position="6"/>
            <end position="74"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022714"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50937"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ67279.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="155" mass="17342" checksum="B5CA7406E5F79014" modified="2015-12-09" version="1">MKGTDTLSIGELAERTGLAVSAIRFYEAKGLVAPVRTESGQRRFMRADIRRLSFVLVAQEFGFSIAEIAAQMEKLPENRAPTKADWTRISREFRKHLDARIEGLQALRDKLDGCIGCGCLSMKKCQLYNAGDAANRHGRGPRYLMGDRPDLPEEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZX33</accession>
    <name>A0A0M6ZX33_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01332</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67328.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67328">
        <property type="protein sequence ID" value="CTQ67328"/>
        <property type="gene ID" value="LAX5112_01332"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="153"/>
            <end position="175"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67328.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="457" mass="49958" checksum="3AF7D3D821155889" modified="2015-12-09" version="1">MAKLDPTIDSSEFHGDSAQVLSALSEILASATFWNADRLKSFLEYVVLETVHGRGDGIRGKTIAQDVYGRRAETDGDPENVVRVDARRLRRRLSEYYEDEGRDAKVRIHIDSGGYTPRFETVSDAEAAEIDEPSSAPGPPLPDQPKHHRTLPYWVAGAALFIVTAFGATFSIYGFHIHSSEISASSDRLVERQAILEKSPAALQAVNMAEQARDLIFPIFDVERQRLSLGFFKEAIRLDPDYAGGYAGAAQTTGTLALLSAPGDQKETLKTQARSYAEKAVALDPTDPWSQSAASWAAMANGDYAEASRLSTRANAMAPTDLHILEIYGTVALANGDFQLALNLSRPLIEAQEKLHRTANRNVYAVANFFLGNHAETLQALKIAAEQGEPVSSGMLAFKIAAHQALGHTETAQRHAKILMDTWPIPIDEVIARIMRDPAHPDRVAGYLKQAGWSPPD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZX66</accession>
    <name>A0A0M6ZX66_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Chaperone protein TorD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00874</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66113.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670767.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00874"/>
    <dbReference type="EnsemblBacteria" id="CTQ66113">
        <property type="protein sequence ID" value="CTQ66113"/>
        <property type="gene ID" value="LAX5112_00874"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020945">
        <property type="entry name" value="DMSO/NO3_reduct_chaperone"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036411">
        <property type="entry name" value="TorD-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02613">
        <property type="entry name" value="Nitrate_red_del"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89155">
        <property type="entry name" value="SSF89155"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ66113.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="202" mass="22098" checksum="C0E65F1DCA248E16" modified="2015-12-09" version="1">MDAVVTEYVIDPEDQARADLYNFLGVLLAKPANNDLLKQIAALSGDDTPLGTTLKTLAKLASVTSEQDAEREFNALFIGLGRGELLPYASHYLTGFLNEKPLANLRQEMAERGIQRAEGKKEPEDNIASLMEIMGGLIVGRFGKVTSVADQKAFFNAHVGPWAVHFFSDLEASRTSVLYSAVGSLGRQFMEIEAEAFEMLPN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXF2</accession>
    <name>A0A0M6ZXF2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 7">DNA repair protein RecO</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6 7">Recombination protein O</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7 9" type="primary">recO</name>
        <name evidence="9" type="ORF">LAX5112_01065</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Involved in DNA repair and RecF pathway recombination.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 7">Belongs to the RecO family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66710.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01065"/>
    <dbReference type="EnsemblBacteria" id="CTQ66710">
        <property type="protein sequence ID" value="CTQ66710"/>
        <property type="gene ID" value="LAX5112_01065"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1440.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00201">
        <property type="entry name" value="RecO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037278">
        <property type="entry name" value="ARFGAP/RecO"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022572">
        <property type="entry name" value="DNA_rep/recomb_RecO_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003717">
        <property type="entry name" value="RecO"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042242">
        <property type="entry name" value="RecO_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33991">
        <property type="entry name" value="PTHR33991"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02565">
        <property type="entry name" value="RecO_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11967">
        <property type="entry name" value="RecO_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57863">
        <property type="entry name" value="SSF57863"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00613">
        <property type="entry name" value="reco"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 7" id="KW-0227">DNA damage</keyword>
    <keyword evidence="4 7" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="5 7" id="KW-0234">DNA repair</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DNA_rep/recomb_RecO_N" evidence="8">
        <location>
            <begin position="39"/>
            <end position="106"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007452"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00021310"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00033409"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00201"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF11967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ66710.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="287" mass="31897" checksum="60D5C31AADED33E1" modified="2015-12-09" version="1">MILSATGKWGWSFQSSWPCARESGTVWRRPEQGTVALEWSGYGVVLTTRKHGENDVILEVMTADRGRHLGLVRGGRSKRHRPALQPGNELSLTWKARLSDHLGQFQIEPHTARAADLMNSGIGLAAVQHLAALVRLLPERHPYPRIYGALNVVLDHLDASDAAAALMIRFELELLQELGAGLDLTSCAATGTTDDLAYVSPRSARAVSREAGQPYHDKLLPLPSFLLDGQRQAGTELTWQDVTQGFQLTGFFLDRQLGERNITDSGTRTLLMNALEKRYRSEFPWNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZY93</accession>
    <name>A0A0M6ZY93_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Cysteine desulfuration protein SufE</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">sufE</name>
        <name evidence="3" type="ORF">LAX5112_01512</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the SufE family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67768.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671319.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01512"/>
    <dbReference type="EnsemblBacteria" id="CTQ67768">
        <property type="protein sequence ID" value="CTQ67768"/>
        <property type="gene ID" value="LAX5112_01512"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003808">
        <property type="entry name" value="Fe-S_metab-assoc_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43597">
        <property type="entry name" value="PTHR43597"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02657">
        <property type="entry name" value="SufE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SufE" evidence="2">
        <location>
            <begin position="10"/>
            <end position="134"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010282"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02657"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ67768.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="143" mass="15704" checksum="E062447CAA2EFC58" modified="2015-12-09" version="1">MTTTLDDILETFEFLDDWEDRYKYLIDLGKELPPLTDAERSEEHKVRGCVSQVWLITGIEKNDAGAPVLKFRGDSDALIVQGLVAIVTAVFSGKTAEGILKTDVEGVFNQLGLQEHLTPQRSNGLRSMVGRIRTDAEAALAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYP2</accession>
    <name>A0A0M6ZYP2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">SiaC domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01042</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66644.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008193103.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01042"/>
    <dbReference type="EnsemblBacteria" id="CTQ66644">
        <property type="protein sequence ID" value="CTQ66644"/>
        <property type="gene ID" value="LAX5112_01042"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018530">
        <property type="entry name" value="SiaC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09345">
        <property type="entry name" value="SiaC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SiaC" evidence="1">
        <location>
            <begin position="8"/>
            <end position="127"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF09345"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66644.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="132" mass="14625" checksum="D7B758D924D6B88D" modified="2015-12-09" version="1">MTDTSLKIEATSRSPEVHLDAANGTLSMSGESYPEDASAFFGPVFQAVAEHVAASDGQALTVEMRFIYFNSSSAKAIMNLFQMLEEAAEDGKTITINWYFDPEDDMMEEMGEDFAEDFEHATFNLKPETEDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZL9</accession>
    <name>A0A0M6ZZL9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Bacterial extracellular solute-binding proteins, family 3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01472</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67666.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01472"/>
    <dbReference type="EnsemblBacteria" id="CTQ67666">
        <property type="protein sequence ID" value="CTQ67666"/>
        <property type="gene ID" value="LAX5112_01472"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="domain" description="PBPb" evidence="2">
        <location>
            <begin position="31"/>
            <end position="223"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00497"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ67666.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="253" mass="28108" checksum="7BBC7730FC389C92" modified="2015-12-09" version="1">MAFRVLACLAGMLLSLVFGGLSLADENRLVIVGFSTPPYLSIGPDDEPRGLLVDLVKTAAAGSDVQVHFEVTSWPRAQLEVRKGAADLIFPVVYTPERKDWLNYPTNPITQFEMMIFARKNPSYDFTGDVTQLHGLSIGKIASGRMHPHFRALEESGKARIASRDSLEELLTAVHLERLDGFVAPHLMTIEEAHRIDLDTVAPFAQPVGVSDIYLAFSKNSTKNDAWNRLQQNLPRLDQAKADFLMSMKETVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZQ7</accession>
    <name>A0A0M6ZZQ7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01189</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67043.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671031.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01189"/>
    <dbReference type="EnsemblBacteria" id="CTQ67043">
        <property type="protein sequence ID" value="CTQ67043"/>
        <property type="gene ID" value="LAX5112_01189"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027597">
        <property type="entry name" value="HprK-rel_B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR04355">
        <property type="entry name" value="HprK_rel_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67043.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="357" mass="39387" checksum="047BB0ECEC520C30" modified="2015-12-09" version="1">MRTAADVLAQLNRDGLPETLYLETGPVRLAVRCEVPMAVELRHHLKEALAEAGPVAATIDVLEGQNLSVQLDWIDWAREPGKAGRKDAYVELDDGRLVHKIRTGMTFLQSSQALAAFGHCLAYPNQVINFINTQILNICKRDGWEICHAAAVTDGHKGLAIAGLSGGGKSTAILRMMDLDTTRFVTNDRLMVRAAAKGTEGLGIPKNPRINPGTILHNPRLAPLLSDERKAELLDMPPEDLWQLEEKHDLFISEIYGPDRMSFTAPLTEFWVLNWSRSSTEPMRLVDADLTERPDLLGAIMKSAGPFFQDANGVFLRDDEPLEPDAYLQQLKSVRIREVTGAIDFDALAAAGKDLFA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A006</accession>
    <name>A0A0M7A006_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01226</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67134.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671065.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67134">
        <property type="protein sequence ID" value="CTQ67134"/>
        <property type="gene ID" value="LAX5112_01226"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025127">
        <property type="entry name" value="DUF4054"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13262">
        <property type="entry name" value="DUF4054"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="59"/>
            <end position="81"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67134.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="132" mass="14444" checksum="873E42F58BDE6E06" modified="2015-12-09" version="1">MPTAAEFKTRFPEFSPVSDALVDMILAETDAAVGTNWLERDRPVAVNLLTAHNLSMEGEPERSKAIAEGRSVSNAQSGPVSAMKVGDVSVTYEGRSKSDQKSETVADEYRKTSYGARYLELMRKNFTGPLIV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A052</accession>
    <name>A0A0M7A052_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01259</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67193.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671094.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67193">
        <property type="protein sequence ID" value="CTQ67193"/>
        <property type="gene ID" value="LAX5112_01259"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67193.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="62" mass="6590" checksum="E02B053653F74FEF" modified="2015-12-09" version="1">MARLSVLGECGCGLKHPIPVPDQSEVWTQKDAERVVCGACETTVENLKLLEPDSHAGIKAAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0A4</accession>
    <name>A0A0M7A0A4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Phosphoribosylaminoimidazole-succinocarboxamide synthase</fullName>
            <ecNumber evidence="8">6.3.2.6</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">SAICAR synthetase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8 10" type="primary">purC</name>
        <name evidence="10" type="ORF">LAX5112_01565</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 8">
            <text>5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate + ATP + L-aspartate = (2S)-2-[5-amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamido]succinate + ADP + 2 H(+) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:22628"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29991"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58443"/>
            <dbReference type="ChEBI" id="CHEBI:77657"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.2.6"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 8">Purine metabolism; IMP biosynthesis via de novo pathway; 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate: step 1/2.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 8">Belongs to the SAICAR synthetase family.</text>
    </comment>
    <dbReference type="EC" id="6.3.2.6" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67906.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008195310.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01565"/>
    <dbReference type="EnsemblBacteria" id="CTQ67906">
        <property type="protein sequence ID" value="CTQ67906"/>
        <property type="gene ID" value="LAX5112_01565"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00074">
        <property type="reaction ID" value="UER00131"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004639">
        <property type="term" value="F:phosphoribosylaminoimidazolesuccinocarboxamide synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006189">
        <property type="term" value="P:'de novo' IMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009236">
        <property type="term" value="P:cobalamin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01415">
        <property type="entry name" value="SAICAR_synt_PurC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00137">
        <property type="entry name" value="SAICAR_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028923">
        <property type="entry name" value="SAICAR_synt/ADE2_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033934">
        <property type="entry name" value="SAICAR_synt_PurC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001636">
        <property type="entry name" value="SAICAR_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018236">
        <property type="entry name" value="SAICAR_synthetase_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01259">
        <property type="entry name" value="SAICAR_synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00081">
        <property type="entry name" value="purC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01057">
        <property type="entry name" value="SAICAR_SYNTHETASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 8 10" id="KW-0436">Ligase</keyword>
    <keyword evidence="5 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6 8" id="KW-0658">Purine biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SAICAR_synt" evidence="9">
        <location>
            <begin position="7"/>
            <end position="235"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000706"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004672"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00137"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF01259"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ67906.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="254" mass="29058" checksum="39C1E7816662D5DE" modified="2015-12-09" version="1">MNRRRRIYEGKAKILYEGPEPGTLVQHFKDDATAFNNKKHEIVDGKGVLNNRISEYIFNNLNAIGIPTHFIRRMNMREQLIREVEIIPLEVVVRNVAAGSIAKRLGLEEGTQLPRSIIEFYYKNDELDDPMVSEEHITAFGWATPQELDDMMALAIRVNDFLSGLFLGVGIRLVDFKIECGRLFEGDLMRIVVADEISPDSCRLWDTETNEKMDKDRFRREMGGMLEAYQEVAKRLGLVTQNERPVGSGPTLVQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0H4</accession>
    <name>A0A0M7A0H4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Phosphoribosylformylglycinamidine synthase subunit PurQ</fullName>
            <shortName evidence="1">FGAM synthase</shortName>
            <ecNumber evidence="1">6.3.5.3</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="1">Formylglycinamide ribonucleotide amidotransferase subunit I</fullName>
            <shortName evidence="1">FGAR amidotransferase I</shortName>
            <shortName evidence="1">FGAR-AT I</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="1">Glutaminase PurQ</fullName>
            <ecNumber evidence="1">3.5.1.2</ecNumber>
        </alternativeName>
        <alternativeName>
            <fullName evidence="1">Phosphoribosylformylglycinamidine synthase subunit I</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="1 2" type="primary">purQ</name>
        <name evidence="2" type="ORF">LAX5112_01568</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + H2O + L-glutamine + N(2)-formyl-N(1)-(5-phospho-beta-D-ribosyl)glycinamide = 2-formamido-N(1)-(5-O-phospho-beta-D-ribosyl)acetamidine + ADP + H(+) + L-glutamate + phosphate</text>
            <dbReference type="Rhea" id="RHEA:17129"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="ChEBI" id="CHEBI:147286"/>
            <dbReference type="ChEBI" id="CHEBI:147287"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.5.3"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>H2O + L-glutamine = L-glutamate + NH4(+)</text>
            <dbReference type="Rhea" id="RHEA:15889"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="EC" id="3.5.1.2"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1">Purine metabolism; IMP biosynthesis via de novo pathway; 5-amino-1-(5-phospho-D-ribosyl)imidazole from N(2)-formyl-N(1)-(5-phospho-D-ribosyl)glycinamide: step 1/2.</text>
    </comment>
    <comment type="subunit">
        <text evidence="1">Part of the FGAM synthase complex composed of 1 PurL, 1 PurQ and 2 PurS subunits.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EC" id="6.3.5.3" evidence="1"/>
    <dbReference type="EC" id="3.5.1.2" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67912.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671356.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01568"/>
    <dbReference type="EnsemblBacteria" id="CTQ67912">
        <property type="protein sequence ID" value="CTQ67912"/>
        <property type="gene ID" value="LAX5112_01568"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00074">
        <property type="reaction ID" value="UER00128"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004359">
        <property type="term" value="F:glutaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004642">
        <property type="term" value="F:phosphoribosylformylglycinamidine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006189">
        <property type="term" value="P:'de novo' IMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006541">
        <property type="term" value="P:glutamine metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00421">
        <property type="entry name" value="PurQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010075">
        <property type="entry name" value="PRibForGlyAmidine_synth_PurQ"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001586">
        <property type="entry name" value="FGAM_synth_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="SSF52317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01737">
        <property type="entry name" value="FGAM_synth_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="1" id="KW-0315">Glutamine amidotransferase</keyword>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1 2" id="KW-0436">Ligase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="1" id="KW-0658">Purine biosynthesis</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" description="Nucleophile" evidence="1">
        <location>
            <position position="86"/>
        </location>
    </feature>
    <feature type="active site" evidence="1">
        <location>
            <position position="196"/>
        </location>
    </feature>
    <feature type="active site" evidence="1">
        <location>
            <position position="198"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00421"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67912.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="222" mass="23720" checksum="B75A17E90DA2617A" modified="2015-12-09" version="1">MKTAVIVFPGSNRDRDMFHALELITGTRPVGVWHTESSLPDADLVIVPGGFSYGDYLRSGAIAARSPILKDLVAKAESGVSVLGVCNGFQILTEACLLPGALMRNAGLTFVCKEVMLETVNSATQFSSKFEKGQVWRCPVAHHDGNYFADAETLKSVEGNGQVVFRYANGTNPNGSINDIAGVTNAKGNVLGMMPHPENLVESLHGGLDGRLLFESLLEKVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0J9</accession>
    <name>A0A0M7A0J9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Transport permease protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">yadH</name>
        <name evidence="8" type="ORF">LAX5112_01602</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cell inner membrane</location>
            <topology evidence="6">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the ABC-2 integral membrane protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68006.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008192690.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01602"/>
    <dbReference type="EnsemblBacteria" id="CTQ68006">
        <property type="protein sequence ID" value="CTQ68006"/>
        <property type="gene ID" value="LAX5112_01602"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013525">
        <property type="entry name" value="ABC_2_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000412">
        <property type="entry name" value="ABC_2_transport"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01061">
        <property type="entry name" value="ABC2_membrane"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006648">
        <property type="entry name" value="DrrB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00164">
        <property type="entry name" value="ABC2TRNSPORT"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51012">
        <property type="entry name" value="ABC_TM2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="20"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="55"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="102"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="137"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="167"/>
            <end position="186"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="198"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="221"/>
            <end position="245"/>
        </location>
    </feature>
    <feature type="domain" description="ABC2_membrane" evidence="7">
        <location>
            <begin position="6"/>
            <end position="216"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00442"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU361157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF01061"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ68006.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="253" mass="28052" checksum="A80A338A6ABD2E28" modified="2015-12-09" version="1">MNFEAVKAIYLAEMARTKRTIMQSIVSPVISTVLYFVVFGAAIGSRISEVDGVSYGAFIVPGLIMLSLMTQSLSNASFGIYFPQFTGTIFEVLSAPISFLEITIAYVGAAATKSILVGLIILITANFFVDIEIQHPFWMAAFFLLTAITFALLGFIIGIWADNFEKLQFVPLLIVTPLAFLGGSFYSISMLPEVWQKVTLINPVVYLISGFRWSFYGQADVSLWLSLFMTLLFLAVSLAIVHWIFKTGYKLKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A126</accession>
    <name>A0A0M7A126_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Leucine-responsive regulatory protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">lrp_5</name>
        <name evidence="5" type="ORF">LAX5112_01582</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67950.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01582"/>
    <dbReference type="EnsemblBacteria" id="CTQ67950">
        <property type="protein sequence ID" value="CTQ67950"/>
        <property type="gene ID" value="LAX5112_01582"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000485">
        <property type="entry name" value="AsnC-type_HTH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019888">
        <property type="entry name" value="Tscrpt_reg_AsnC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019887">
        <property type="entry name" value="Tscrpt_reg_AsnC/Lrp_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019885">
        <property type="entry name" value="Tscrpt_reg_HTH_AsnC-type_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01037">
        <property type="entry name" value="AsnC_trans_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00033">
        <property type="entry name" value="HTHASNC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00344">
        <property type="entry name" value="HTH_ASNC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00519">
        <property type="entry name" value="HTH_ASNC_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50956">
        <property type="entry name" value="HTH_ASNC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH asnC-type" evidence="4">
        <location>
            <begin position="6"/>
            <end position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50956"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ67950.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="155" mass="17110" checksum="CEBC30D916FCEDA5" modified="2015-12-09" version="1">MGSGAFDAFDIQILRELRKDGRISIQDLSERIGLSATPVARRLRQLEDQGIITGYCALIDEMKLGYEVSVFVSVQLDKQVDVTLDQFETAIQAFPEVVDCWLMTGNRDYLLRVATTGLSAFEAFLTGKLTKVPGVANIESSIPLRRVKSGVARTP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A227</accession>
    <name>A0A0M7A227_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01924</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68889.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01924"/>
    <dbReference type="EnsemblBacteria" id="CTQ68889">
        <property type="protein sequence ID" value="CTQ68889"/>
        <property type="gene ID" value="LAX5112_01924"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010297">
        <property type="entry name" value="DUF900_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014586">
        <property type="entry name" value="UCP033909"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05990">
        <property type="entry name" value="DUF900"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF033909">
        <property type="entry name" value="UCP033909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809185" evidence="1">
        <location>
            <begin position="37"/>
            <end position="396"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68889.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="396" mass="42896" checksum="08C9524103CBD2B2" modified="2015-12-09" version="1">MLSISVPSPARLAVSALLIALLLSACGSRPTTGALAINTEPAAGAQDHDVLIVTTRERDPTPNTYFNGERSETINYAEATISVPPAHKAGAIEWPREVPGNPKTDFVARKAGYIEDEQAFLRQLNQQLSARPKGKRDVMLFIHGYNTLFAEGLYRFTQFVHDSQAPVVPVLFTWASRGQLQGYVYDLNSAALARDSLEQTFRLLAKSKADSISILAHSMGNYLLLETARQMPLAERRQFDRKINSVVLAAPDIDIDLFKSSLRKLGKPPKPYIIVVSRDDKALRLSRAIAGGVERVGAYSDDEELAELGAIVFDVTELDAGETSSHSKFAALAEYSPELRDALLKSGLTDQNSVTGPKTLGDDLGSFVGNTTQAAVTLPIKIIAAPFTLATGGSRQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A234</accession>
    <name>A0A0M7A234_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">N-acetylglutamate synthase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01537</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67834.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671336.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67834">
        <property type="protein sequence ID" value="CTQ67834"/>
        <property type="gene ID" value="LAX5112_01537"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="4"/>
            <end position="158"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67834.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="158" mass="17437" checksum="C3D308FCF8E56876" modified="2015-12-09" version="1">MTDFTVTDADPSRDLEDVKRLFRAYVDWLGIDLSYQGFEEELATLPGKYVAPAGALLLAKTSSDVSIGCVALRPMAEERFCEMKRLYVAPEGRGSGVGSSLVSAVLARARSAGYRYMRLDTLPTMEGAIRLYKDAGFVEIPAYYDTPIKETVFLQCSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A235</accession>
    <name>A0A0M7A235_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01828</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68657.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671544.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01828"/>
    <dbReference type="EnsemblBacteria" id="CTQ68657">
        <property type="protein sequence ID" value="CTQ68657"/>
        <property type="gene ID" value="LAX5112_01828"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008320">
        <property type="entry name" value="UCP032025"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07370">
        <property type="entry name" value="DUF1489"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF032025">
        <property type="entry name" value="UCP032025"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ68657.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="144" mass="16396" checksum="6208D90722E00106" modified="2015-12-09" version="1">MTLHLVKLCVGADSVESLQAWIDFRVEQARAAGLGAHTTHTTRMVPTRRDELLDGGSLYWVIKGKIQARQHLLDIRPFTDDAGVKRCDLVLEPRLILTQYQPKRPFQGWRYLKAEDAPKDIRAGGDVQNMPDSMRRDLTELCLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2N9</accession>
    <name>A0A0M7A2N9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Bacterial regulatory proteins, tetR family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01598</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67993.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008193660.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01598"/>
    <dbReference type="EnsemblBacteria" id="CTQ67993">
        <property type="protein sequence ID" value="CTQ67993"/>
        <property type="gene ID" value="LAX5112_01598"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039536">
        <property type="entry name" value="TetR_C_Proteobacteria"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14246">
        <property type="entry name" value="TetR_C_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00440">
        <property type="entry name" value="TetR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50977">
        <property type="entry name" value="HTH_TETR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH tetR-type" evidence="2">
        <location>
            <begin position="20"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="1">
        <location>
            <begin position="43"/>
            <end position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ67993.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="216" mass="23353" checksum="1C1FB8DFA168328F" modified="2015-12-09" version="1">MPAASFDIATSRPDAAPEFSPRQQVVLQHALTLLVEGGEKALTTAGLARTASCSKESLYKWFGDRDGLLAAVVAYQASQVQFPSESGATADPDTFRAHVTAFVEALLAVLFSESSLALNRLSIGQSNTNSNRLGQLLLVRGKHMISARARNMLETGRRHGLLKFDDAEDAYQVLYGLAIRDVHIRLLLGETASAAEKDLKSQAETAVARFYQLFGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2W2</accession>
    <name>A0A0M7A2W2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Putative transmembrane sensor domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_01818</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68640.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671537.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01818"/>
    <dbReference type="EnsemblBacteria" id="CTQ68640">
        <property type="protein sequence ID" value="CTQ68640"/>
        <property type="gene ID" value="LAX5112_01818"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004016">
        <property type="term" value="F:adenylate cyclase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009190">
        <property type="term" value="P:cyclic nucleotide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035556">
        <property type="term" value="P:intracellular signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07302">
        <property type="entry name" value="CHD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1230">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001054">
        <property type="entry name" value="A/G_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00211">
        <property type="entry name" value="Guanylate_cyc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50125">
        <property type="entry name" value="GUANYLATE_CYCLASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="225"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="domain" description="Guanylate cyclase" evidence="3">
        <location>
            <begin position="10"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="171"/>
            <end position="203"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ68640.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="282" mass="31601" checksum="B0FD84C83F739653" modified="2015-12-09" version="1">MERAKRRLAAIMCADVAHYSRLMEQDEDGTLNRLKTYRSIMSSLTARHSGRIVNTWGDAVIVEFSSVIEAVQCAVEIQNELSHKNAELPDATRMEFRIGLNLGDIMIEGDDIYGDGVNVAARLQELAPKGGIMLSQSVYDQVRTKLALGFEPLGPKQVKNVSEPVQTFSVRLGGRNSPETAGSEEDDLQDTAEPNSNGNWEKDTQTVANGFEQARRWIRSQPRRVQSCVFMIGFFFVLNLLTSGLSTLWFVWPSLPFGMMLVWHLIAGRRGDKLPIHPHRPD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2X2</accession>
    <name>A0A0M7A2X2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01824</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68650.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ68650">
        <property type="protein sequence ID" value="CTQ68650"/>
        <property type="gene ID" value="LAX5112_01824"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006747">
        <property type="entry name" value="DUF599"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04654">
        <property type="entry name" value="DUF599"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="72"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="111"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="184"/>
            <end position="212"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68650.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="251" mass="27525" checksum="1E975B0D96385FF6" modified="2015-12-09" version="1">MHALSQLDYAAAGLFLVAWLGFNLLIDLGPLRKKTLSYAMETQRRNWMLTMATREVRIMDTAILSGLQQGTAFFASTALLAIGGSFALLDATDRILQVAGDLSIPVSDSRALWEIKVLGLMLIFAYSFFKFGWAYRLFNYASIVMGAVPERSQGDPDAIREIAGKAGELNVLAGRHFNRGQRALFFAIGFLGWFAGPIAFAILTVAVFLVLLRRQFSSKARATVMSGQLSNFSPDVKLGEYTDTGSSNPFT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A348</accession>
    <name>A0A0M7A348_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative NAD(P)H nitroreductase/MT3217</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01961</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68991.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671642.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01961"/>
    <dbReference type="EnsemblBacteria" id="CTQ68991">
        <property type="protein sequence ID" value="CTQ68991"/>
        <property type="gene ID" value="LAX5112_01961"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.109.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000415">
        <property type="entry name" value="Nitroreductase-like"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55469">
        <property type="entry name" value="SSF55469"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809210" evidence="1">
        <location>
            <begin position="25"/>
            <end position="368"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68991.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="368" mass="40522" checksum="635C697457068892" modified="2015-12-09" version="1">MSVSRRKTLALLGGGLIVAATASAGTFLATRTPEKALKPWSNAGGYEDPRLFALSYALLAPNPHNRQPWLIELTDKNAFRLHRDPARDLPHTDPYHRQIFIGLGCFLEQMAIAASLKGFSAEFSLFPEGADGPIADVVLVEGADSDPLGAHIMDRRSCKEPFQDTPIPAAMTADLQTYGTVWTNPADVESIKDLTWQAWLTEMNTHRTLKESVDLMRFGKVEINANPDGIDLGGPFLESLMVAGLLTKDSQLDPESTGFQEGVKMYQAMLHATPAYISLTTPANTRPDQIEAGRRWLRLNLETTHLGLALHPVSQALQEFDEMAPHHAEAHRLLAKPGETVQMLGRLGFGPQTARTPRWPLETRMMNG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A457</accession>
    <name>A0A0M7A457_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Putative L-lactate dehydrogenase operon regulatory protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">lldR</name>
        <name evidence="5" type="ORF">LAX5112_02103</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69407.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02103"/>
    <dbReference type="EnsemblBacteria" id="CTQ69407">
        <property type="protein sequence ID" value="CTQ69407"/>
        <property type="gene ID" value="LAX5112_02103"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07377">
        <property type="entry name" value="WHTH_GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.530">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011711">
        <property type="entry name" value="GntR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008920">
        <property type="entry name" value="TF_FadR/GntR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000524">
        <property type="entry name" value="Tscrpt_reg_HTH_GntR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07729">
        <property type="entry name" value="FCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00392">
        <property type="entry name" value="GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00035">
        <property type="entry name" value="HTHGNTR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00895">
        <property type="entry name" value="FCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00345">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48008">
        <property type="entry name" value="SSF48008"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50949">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH gntR-type" evidence="4">
        <location>
            <begin position="11"/>
            <end position="81"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ69407.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="245" mass="27093" checksum="925D3C1363BEA023" modified="2015-12-09" version="1">MAIEYQAIRKEGLSTQIANAIRKAILDGALSVEERLPSETELADRFGVSRATVREAMKRLAAQNLIRSERGASGGAFVNRITFDEARGDLVGTTRLLIGMNNIPFEDAIEARYLLESSCLALACENRSEDDLTAMAREISLQSGDLSDEDFCDSDVRFHSVIAKATGNPLLMFQVSGAIEAMQPLMNMLVYRLRDKKHIAGLHDRLREALGHRDSMAALTVLEEIAAYTRQLAELRRAPKEDPAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A532</accession>
    <name>A0A0M7A532_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Leucine/isoleucine/valine transporter permease subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_02154</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69546.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671807.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02154"/>
    <dbReference type="EnsemblBacteria" id="CTQ69546">
        <property type="protein sequence ID" value="CTQ69546"/>
        <property type="gene ID" value="LAX5112_02154"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015658">
        <property type="term" value="F:branched-chain amino acid transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06581">
        <property type="entry name" value="TM_PBP1_LivM_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001851">
        <property type="entry name" value="ABC_transp_permease"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043428">
        <property type="entry name" value="LivM-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30482">
        <property type="entry name" value="PTHR30482"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02653">
        <property type="entry name" value="BPD_transp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="20"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="47"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="76"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="100"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="124"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="184"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="234"/>
            <end position="253"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="273"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="308"/>
            <end position="332"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ69546.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="362" mass="38607" checksum="7089023D18505F9D" modified="2015-12-09" version="1">MTMPAQTDWSVETKTRTSTLFLGVAVVVVIVAAFAPFYASRSLIQDLFFILTMLVLAQGWNLLAGYAGLVSVGQQAFVGIGAYAMFSGVILLGLDPVVSILLGGIAAALLAIPAAFFTFRLQGAYFAIGTWVVAEIVRLLVAQWKMLGGGTGTSLPRSASREMFGIEFLKDTFGFKTSAAADVVTYWLALALAVATIGVVYWLLRSRQGLGLAAVRDNQNAARSVGVDAQRIKAIVYLSTAFITGLAGALIYVQKARISPDAAFSVLDWTAYVIFIVVIGGIGTIEGPIIGVLVFFALQNTLSGYGSWYLLVLGLLGILIMLFAPRGLWGLFTDRTSIELFPIRRKLTGGPFKQSSKGGPHG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A572</accession>
    <name>A0A0M7A572_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">GMP synthase [glutamine-hydrolyzing]</fullName>
            <ecNumber evidence="2">6.3.5.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">guaA_1</name>
        <name evidence="2" type="ORF">LAX5112_02173</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="6.3.5.2" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69586.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02173"/>
    <dbReference type="EnsemblBacteria" id="CTQ69586">
        <property type="protein sequence ID" value="CTQ69586"/>
        <property type="gene ID" value="LAX5112_02173"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003922">
        <property type="term" value="F:GMP synthase (glutamine-hydrolyzing) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd01741">
        <property type="entry name" value="GATase1_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044992">
        <property type="entry name" value="ChyE-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017926">
        <property type="entry name" value="GATASE"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42695">
        <property type="entry name" value="PTHR42695"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00117">
        <property type="entry name" value="GATase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="SSF52317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0436">Ligase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GATase" evidence="1">
        <location>
            <begin position="17"/>
            <end position="175"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69586.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="238" mass="26663" checksum="B9B4739849A0FF8C" modified="2015-12-09" version="1">MLIVLHQEHSSPGRVGQELVKRGFALDIRKPRFGDSLPDTMRGHAGSVIFGGPMSANDPDGFIHKEIDWIKVPLQEEAPFLGICLGAQMMVKQLGGTVSGHRDELVEIGYYPLKPTEAGKDLMDWPKKVYQWHREGFDLPSGADLLATSPTYPNQAIRVGPAAYGIQFHPELTHQMMVKWTTKGAPRMELPGAQQRRDHFAGRFVYDTAVRAWLDRFLDLWIGTAEAPVQHNRLKAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5B4</accession>
    <name>A0A0M7A5B4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">8-oxoguanine deaminase</fullName>
            <ecNumber evidence="2">3.5.4.32</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01896</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.5.4.32" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68814.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01896"/>
    <dbReference type="EnsemblBacteria" id="CTQ68814">
        <property type="protein sequence ID" value="CTQ68814"/>
        <property type="gene ID" value="LAX5112_01896"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102127">
        <property type="term" value="F:8-oxoguanine deaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006680">
        <property type="entry name" value="Amidohydro-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011059">
        <property type="entry name" value="Metal-dep_hydrolase_composite"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032466">
        <property type="entry name" value="Metal_Hydrolase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01979">
        <property type="entry name" value="Amidohydro_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51338">
        <property type="entry name" value="SSF51338"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51556">
        <property type="entry name" value="SSF51556"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Amidohydro-rel" evidence="1">
        <location>
            <begin position="66"/>
            <end position="451"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01979"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68814.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="481" mass="52253" checksum="89D6C9137927ACAD" modified="2015-12-09" version="1">MILPERLFMPETLLLKNADMLVTMDGERREIAGGGVYAVDGVIQLVGPSDDLPKQADTVVDASGQIVLPGFVNTHHHLNQTLTRNLPAAQNNNLFPWLQAHYRVWARTDPEASRASTLIGLAELALSGCTTVFDHTYLFQSGNKVDYQIEAARELGVRFHASRGSMSLGESKGGLPPDECVEDEEFILNDTVRVIDRYHDAADGAMTRVVVAPCSPFSVSEDLLRESAALARDKKVMLHTHLCETLDEERYTLERFGKRPVEWMEGLDWTGPDVWFAHAIHVDDDEIRLFAKTGCGAAHCPCSNMRLASGIAPVKKYMAAGVKVGLGVDGSASNDSSNMLMEARQAMLLARLQLGLQPPEGPSKYALLPPAHPLRAGEWMTAREALELATLGGASVLGRNDIGSLETGKCADFFTLELNTIGFAGALHDPVAAVVFCAPQTAKTTVINGKVIVEDSQITTMDMGPVIEAHNRLSLKLTENL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A754</accession>
    <name>A0A0M7A754_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">4-hydroxybenzoate octaprenyltransferase</fullName>
            <ecNumber evidence="8">2.5.1.39</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">4-HB polyprenyltransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8 9" type="primary">ubiA</name>
        <name evidence="9" type="ORF">LAX5112_02342</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>4-hydroxybenzoate + all-trans-octaprenyl diphosphate = 4-hydroxy-3-all-trans-octaprenylbenzoate + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:27782"/>
            <dbReference type="ChEBI" id="CHEBI:1617"/>
            <dbReference type="ChEBI" id="CHEBI:17879"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57711"/>
            <dbReference type="EC" id="2.5.1.39"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 8">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="8">Cofactor biosynthesis; ubiquinone biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cell inner membrane</location>
            <topology evidence="8">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the UbiA prenyltransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.39" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70070.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672121.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02342"/>
    <dbReference type="EnsemblBacteria" id="CTQ70070">
        <property type="protein sequence ID" value="CTQ70070"/>
        <property type="gene ID" value="LAX5112_02342"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00232"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0002083">
        <property type="term" value="F:4-hydroxybenzoate decaprenyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047293">
        <property type="term" value="F:4-hydroxybenzoate nonaprenyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008412">
        <property type="term" value="F:4-hydroxybenzoate octaprenyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006744">
        <property type="term" value="P:ubiquinone biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd13959">
        <property type="entry name" value="PT_UbiA_COQ2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.357.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01635">
        <property type="entry name" value="UbiA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006370">
        <property type="entry name" value="HB_polyprenyltransferase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039653">
        <property type="entry name" value="Prenyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000537">
        <property type="entry name" value="UbiA_prenyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030470">
        <property type="entry name" value="UbiA_prenylTrfase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044878">
        <property type="entry name" value="UbiA_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11048">
        <property type="entry name" value="PTHR11048"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01040">
        <property type="entry name" value="UbiA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01474">
        <property type="entry name" value="ubiA_proteo"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00943">
        <property type="entry name" value="UBIA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 8" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="2 8" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8" id="KW-0460">Magnesium</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8 9" id="KW-0808">Transferase</keyword>
    <keyword evidence="5 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="8" id="KW-0831">Ubiquinone biosynthesis</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="43"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="121"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="166"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="189"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="235"/>
            <end position="255"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="261"/>
            <end position="281"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="296"/>
            <end position="315"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022519"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01635"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ70070.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="316" mass="34744" checksum="CC7427B9AF6839B3" modified="2015-12-09" version="1">MFFSTRDTGPVADAVKKHWVDTRLPAGLRPYARLARWERPIGWWLLLWPCWWSAALAAIAAGNSWPNPWHMLLFLIGAIAMRGAGCTYNDIVDVDIDAQVERTRSRPIPAGQVSKRQAKIFLVVQALVGLLVLLQFNSFSIALGIASLIPVAIYPFMKRITNWPQLFLGFAFSWGALMGWAAVFGDLSLAPILLYIGGICWTIGYDTIYAHQDKEDDALVGVKSTARLFGDRTRLALIVLYALASILFALAAALADAGPAAFLGILLGAIHLGWQIVIIDIDDGDQCLQLFRSNKIYGWVLFIGFAADAMISGMFA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7A7</accession>
    <name>A0A0M7A7A7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">AraR_C domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02459</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70306.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672055.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02459"/>
    <dbReference type="EnsemblBacteria" id="CTQ70306">
        <property type="protein sequence ID" value="CTQ70306"/>
        <property type="gene ID" value="LAX5112_02459"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045830">
        <property type="entry name" value="AraR_wHTH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011213">
        <property type="entry name" value="NMN_biosyn"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015797">
        <property type="entry name" value="NUDIX_hydrolase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19368">
        <property type="entry name" value="AraR_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF019423">
        <property type="entry name" value="NMN_biosyn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55811">
        <property type="entry name" value="SSF55811"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AraR_C" evidence="1">
        <location>
            <begin position="245"/>
            <end position="312"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF19368"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70306.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="327" mass="36835" checksum="48560121A9848436" modified="2015-12-09" version="1">MPHRHASIEIGLNAVIVSVAGGMPQIVHVEEPEKDMADSLPFGPFDPLHHRTFEIGLRAWVENQTALRLGYIEQLYTFGDRGRHRVSGDEGPHVVSVGYLALTRQTPDSEETLSRHHSAWRSWYDYFPWEDWRAGRPDLLDTDMLPALKSWAEEPPAEGEPPRALARSERVHLAFGTGGTDWDEERALERFELLYEAGLVAEAKRDGRPAALKRDEITPFGISMEFDHRRVLATAISRLRGKLKYRPVIFELMPSAFTLTDLQNSVEAISGRHLHKQNFRRLVENADLVEPTGATSTATGGRPAALFRFKHQLLSERPAPGLRVGGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7G5</accession>
    <name>A0A0M7A7G5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Heme-based aerotactic transducer HemAT</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">hemAT_2</name>
        <name evidence="8" type="ORF">LAX5112_02715</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="3">Belongs to the methyl-accepting chemotaxis (MCP) protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71095.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672269.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ71095">
        <property type="protein sequence ID" value="CTQ71095"/>
        <property type="gene ID" value="LAX5112_02715"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019825">
        <property type="term" value="F:oxygen binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004888">
        <property type="term" value="F:transmembrane signaling receptor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006935">
        <property type="term" value="P:chemotaxis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01068">
        <property type="entry name" value="globin_sensor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.490.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004090">
        <property type="entry name" value="Chemotax_Me-accpt_rcpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009050">
        <property type="entry name" value="Globin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044398">
        <property type="entry name" value="Globin-sensor_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012292">
        <property type="entry name" value="Globin/Proto"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004089">
        <property type="entry name" value="MCPsignal_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039379">
        <property type="entry name" value="Protoglobin_sensor_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000727">
        <property type="entry name" value="T_SNARE_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00015">
        <property type="entry name" value="MCPsignal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11563">
        <property type="entry name" value="Protoglobin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00260">
        <property type="entry name" value="CHEMTRNSDUCR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00283">
        <property type="entry name" value="MA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46458">
        <property type="entry name" value="SSF46458"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50111">
        <property type="entry name" value="CHEMOTAXIS_TRANSDUC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50192">
        <property type="entry name" value="T_SNARE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4" id="KW-0807">Transducer</keyword>
    <feature type="domain" description="Methyl-accepting transducer" evidence="6">
        <location>
            <begin position="173"/>
            <end position="413"/>
        </location>
    </feature>
    <feature type="domain" description="T-SNARE coiled-coil homology" evidence="7">
        <location>
            <begin position="339"/>
            <end position="401"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="184"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="210"/>
            <end position="232"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023224"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00029447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ71095.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="443" mass="47644" checksum="96A0B22BA1271866" modified="2015-12-09" version="1">MQNQTLKGRLAFFRFTEEDRTLARSIWPTLSSHLPRIMDGFYDHVKTVPHLATMIGDQENRLISAQLSHWERMFNEGPTEAYLERSIRIGLAHVRIGLDPSWYIGGYSFALTQISDVLLTKRMMTAAKRSKVMAVITKLVMLDMDIAISTYHEKMVADAVAREDGLKSAIATFETSLSGVVGELSSTSDELENSSRDLSRETGSIATRMQTMDASSAETASGVQSSATATEEMSASIVEIGRQAGHSREKAQQAVQGAQNTNETVTKLAGFADQVGSVIGLISDIAEQTNLLALNATIEAARAGEMGKGFAVVAAEVKELASQTTKATEEITEQIAAIQQATRQSVQDIDGITTIISELSEIANSIAAAVEQQSSATAEISSAVQIAAVGTQSFTDEIAAVRGSIDSVDGTVETIHETSLTLKNRAARLSEEANQFFDKIKAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7N8</accession>
    <name>A0A0M7A7N8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Type-4 uracil-DNA glycosylase</fullName>
            <ecNumber evidence="3">3.2.2.27</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">LAX5112_02431</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>Hydrolyzes single-stranded DNA or mismatched double-stranded DNA and polynucleotides, releasing free uracil.</text>
            <dbReference type="EC" id="3.2.2.27"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the uracil-DNA glycosylase (UDG) superfamily. Type 4 (UDGa) family.</text>
    </comment>
    <dbReference type="EC" id="3.2.2.27" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70250.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672035.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02431"/>
    <dbReference type="EnsemblBacteria" id="CTQ70250">
        <property type="protein sequence ID" value="CTQ70250"/>
        <property type="gene ID" value="LAX5112_02431"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004844">
        <property type="term" value="F:uracil DNA N-glycosylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.470.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005273">
        <property type="entry name" value="Ura-DNA_glyco_family4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005122">
        <property type="entry name" value="Uracil-DNA_glycosylase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036895">
        <property type="entry name" value="Uracil-DNA_glycosylase-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03167">
        <property type="entry name" value="UDG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00986">
        <property type="entry name" value="UDG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52141">
        <property type="entry name" value="SSF52141"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00758">
        <property type="entry name" value="UDG_fam4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="7" id="KW-0408">Iron</keyword>
    <keyword evidence="8" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="UDG" evidence="10">
        <location>
            <begin position="139"/>
            <end position="289"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="41"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="9">
        <location>
            <begin position="41"/>
            <end position="85"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001400"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006521"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012030"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00019403"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="SMART" id="SM00986"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ70250.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="299" mass="32384" checksum="A2E486142881F2F5" modified="2015-12-09" version="1">MRHLEALLDFYLASGVDASLGEDVVDWFQLSAVQAKARQQSATPQAAAQPVAPGQNASQQVRQVSPQHQSPSQPRPTQATPAVGAGTRSPTDHGAIPDQAVISTARELASSTGSLADLRACLEAFDGCNLKRTAKSLVFADGNPDARVMLIGEAPGRDEDLQGKPFVGRSGQLLDRMLSAIGLDRSRVYIANTVPWRPPGNRTPTPQETEICRPFIQRQIELVNPDVVVFLGAASAKTILGVQDGIRKMRGRWMTYPIAGRQVAALATYHPAYLLRSPLEKRLSWRDFLSVKSKLSELG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A812</accession>
    <name>A0A0M7A812_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Recombination factor protein RarA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02751</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71238.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672311.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02751"/>
    <dbReference type="EnsemblBacteria" id="CTQ71238">
        <property type="protein sequence ID" value="CTQ71238"/>
        <property type="gene ID" value="LAX5112_02751"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011703">
        <property type="entry name" value="ATPase_AAA-3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041628">
        <property type="entry name" value="ChlI/MoxR_AAA_lid"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07726">
        <property type="entry name" value="AAA_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17863">
        <property type="entry name" value="AAA_lid_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA_3" evidence="1">
        <location>
            <begin position="39"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="domain" description="AAA_lid_2" evidence="2">
        <location>
            <begin position="265"/>
            <end position="330"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07726"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF17863"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ71238.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="337" mass="36826" checksum="F9D8FBF1CF3AE10E" modified="2015-12-09" version="1">MSDCLEQIEELKKLMQQSIIGQTEVIDRLIIGLLANGNLLIEGLPGLAKTRAIKAMANNLEADFSRIQFTPDLLPSDVTGTEVYHQAGGEGTFRFEQGPIFANIVLADEINRAPAKVQAALLEAMEERQVTVSGTTHKMEPLFMVMATQNPVEQEGTYPLPEAQMDRFLMHVLITYPPIEDEVKVIELVRGEEQKALGASAEDRSNANGGADAGRGSAIPQSAIFDARAEIASIHVSNAIAKYMADLVYATRTPEAYSEDLGRWIEIGASPRASIALDKCGRTHAWLNGRDYVDPLDIQAIAPDVFRHRLTLTFEAEGDGVTPDKVIEEIINNVALT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A828</accession>
    <name>A0A0M7A828_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Cyclohexanone 1,2-monooxygenase</fullName>
            <ecNumber evidence="5">1.14.13.22</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">LAX5112_02602</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the FAD-binding monooxygenase family.</text>
    </comment>
    <dbReference type="EC" id="1.14.13.22" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70761.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672186.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02602"/>
    <dbReference type="EnsemblBacteria" id="CTQ70761">
        <property type="protein sequence ID" value="CTQ70761"/>
        <property type="gene ID" value="LAX5112_02602"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018667">
        <property type="term" value="F:cyclohexanone monooxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004499">
        <property type="term" value="F:N,N-dimethylaniline monooxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050661">
        <property type="term" value="F:NADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000960">
        <property type="entry name" value="Flavin_mOase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020946">
        <property type="entry name" value="Flavin_mOase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00743">
        <property type="entry name" value="FMO-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000332">
        <property type="entry name" value="FMO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00370">
        <property type="entry name" value="FMOXYGENASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0274">FAD</keyword>
    <keyword evidence="2" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="5" id="KW-0503">Monooxygenase</keyword>
    <keyword evidence="4 5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010139"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ70761.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="495" mass="55167" checksum="81487B7DC5B1AF60" modified="2015-12-09" version="1">MTKRKTVAVIGGGVSGLAAAKAFDERGHRVLGFERSHDFGGVWELSRSYPDVQTQSPKDLYRFTDLPMPDDYPEWPKGPQVHAYVHAYAKKHNLARLFRLNTTVLSMDRRSDGQPGWTLTLETADKAWTQDFDFVAVCTGQFSDKNIISHPGQDAFVQTGGQVMHSSDYTDSSLATGKNVVVLGGSKSATDIAVNAVKNGAKSVTLVYREPVWRVPYFIGGINFKRLLYMRAQELQFNGWSPSITGKILSTLFKPLIWANFRGLEMMLKTQLKLKKWDMVPDVPIEKDASCSLPIVTPGLFEGFEAGTIKPVRGTIDHYENGHAVLTTGDRVPCDVSVLAVGWKLGVPYLAKEYRGKLIEPDGQYRVYRLSVNPDLPDMGFVGFNSSFCTILSAEMIANWLVRFADGQLANQPTDQEMRQNIDMMLDWRRKERPAAQVYGGLCSAPFHFRHFDELLADMGATKTKRSNPMAEQFSYPNADAYGGYLASTPQYVAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8R4</accession>
    <name>A0A0M7A8R4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 5">DNA repair protein RecN</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4 5">Recombination protein N</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8" type="primary">recN</name>
        <name evidence="8" type="ORF">LAX5112_02624</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 5">May be involved in recombinational repair of damaged DNA.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the RecN family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70832.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672202.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02624"/>
    <dbReference type="EnsemblBacteria" id="CTQ70832">
        <property type="protein sequence ID" value="CTQ70832"/>
        <property type="gene ID" value="LAX5112_02624"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004604">
        <property type="entry name" value="DNA_recomb/repair_RecN"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003395">
        <property type="entry name" value="RecF/RecN/SMC_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11059">
        <property type="entry name" value="PTHR11059"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02463">
        <property type="entry name" value="SMC_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF003128">
        <property type="entry name" value="RecN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00634">
        <property type="entry name" value="recN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-0227">DNA damage</keyword>
    <keyword evidence="5" id="KW-0234">DNA repair</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SMC_N" evidence="7">
        <location>
            <begin position="15"/>
            <end position="506"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="6">
        <location>
            <begin position="166"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="6">
        <location>
            <begin position="346"/>
            <end position="380"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009441"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00021315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00033408"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRNR" id="PIRNR003128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF02463"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ70832.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="553" mass="59783" checksum="9235A429831FEB3C" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A930</accession>
    <name>A0A0M7A930_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="10">ATP-dependent RNA helicase RhlE</fullName>
            <ecNumber evidence="10">3.6.4.13</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">rhlE_2</name>
        <name evidence="10" type="ORF">LAX5112_02427</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.6.4.13" evidence="10"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70243.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008193119.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02427"/>
    <dbReference type="EnsemblBacteria" id="CTQ70243">
        <property type="protein sequence ID" value="CTQ70243"/>
        <property type="gene ID" value="LAX5112_02427"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003724">
        <property type="term" value="F:RNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014014">
        <property type="entry name" value="RNA_helicase_DEAD_Q_motif"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51195">
        <property type="entry name" value="Q_MOTIF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 10" id="KW-0347">Helicase</keyword>
    <keyword evidence="2 10" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Q_MOTIF" evidence="9">
        <location>
            <begin position="2"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase ATP-binding" evidence="7">
        <location>
            <begin position="33"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase C-terminal" evidence="8">
        <location>
            <begin position="219"/>
            <end position="384"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="377"/>
            <end position="430"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="Q motif" evidence="5">
        <location>
            <begin position="2"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="6">
        <location>
            <begin position="416"/>
            <end position="430"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51195"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ70243.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="430" mass="46102" checksum="A37354E915150742" modified="2015-12-09" version="1">MTNFESLGLSSSLLSAIKDNGYEAPTPIQQKAIPLILDGQDLMGLAQTGTGKTAAFGLPLIERLLAEPRRAAPKGTRALILAPTRELVNQIAKNLISFLKTTPLRVTSVVGGVSINGQVKRMSKGTDILVATPGRLLDLVDRNAVDLGSASYLVLDEADQMLDLGFIHALRKIAGLVAKDRQTLLFSATMPKQINELAQSYLTDPARVEVSPVGRTADKVRQKVHFMDSKAKTGFLIDVLSDQPDDMSLVFCRTKHGAERLMRKMAQAGIAAGSIHGNKSQNQRERAIKELRSGAIKVLVATDVAARGIDIPGVSHVYNFELPEVAEAYVHRIGRTARAGADGDAVALCAPEEIGLFRQIEKLIGIDIEVASGEAPPLSAAKSAKRGKNNKSGGGGKPRFQKAAGAGDNDNGRRFAKNRRRRPQARKNAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9T0</accession>
    <name>A0A0M7A9T0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 5">Alanine dehydrogenase</fullName>
            <ecNumber evidence="2 5">1.4.1.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">ald_2</name>
        <name evidence="11" type="ORF">LAX5112_02678</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>H2O + L-alanine + NAD(+) = H(+) + NADH + NH4(+) + pyruvate</text>
            <dbReference type="Rhea" id="RHEA:18405"/>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:57972"/>
            <dbReference type="EC" id="1.4.1.1"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the AlaDH/PNT family.</text>
    </comment>
    <dbReference type="EC" id="1.4.1.1" evidence="2 5"/>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70990.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672240.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02678"/>
    <dbReference type="EnsemblBacteria" id="CTQ70990">
        <property type="protein sequence ID" value="CTQ70990"/>
        <property type="gene ID" value="LAX5112_02678"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000286">
        <property type="term" value="F:alanine dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042853">
        <property type="term" value="P:L-alanine catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd05305">
        <property type="entry name" value="L-AlaDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008141">
        <property type="entry name" value="Ala_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008143">
        <property type="entry name" value="Ala_DH/PNT_CS2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007886">
        <property type="entry name" value="AlaDH/PNT_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007698">
        <property type="entry name" value="AlaDH/PNT_NAD(H)-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42795">
        <property type="entry name" value="PTHR42795"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01262">
        <property type="entry name" value="AlaDh_PNT_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05222">
        <property type="entry name" value="AlaDh_PNT_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000183">
        <property type="entry name" value="Alanine_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01002">
        <property type="entry name" value="AlaDh_PNT_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01003">
        <property type="entry name" value="AlaDh_PNT_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00518">
        <property type="entry name" value="alaDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00837">
        <property type="entry name" value="ALADH_PNT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5 8" id="KW-0520">NAD</keyword>
    <keyword evidence="8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3 5 11" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AlaDh_PNT_N" evidence="10">
        <location>
            <begin position="4"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="domain" description="AlaDh_PNT_C" evidence="9">
        <location>
            <begin position="149"/>
            <end position="297"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor/acceptor" evidence="6">
        <location>
            <position position="96"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor/acceptor" evidence="6">
        <location>
            <position position="270"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="15"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="75"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="134"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="198"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="220"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="239"/>
            <end position="240"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="267"/>
            <end position="270"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="298"/>
            <end position="301"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005689"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012897"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRNR" id="PIRNR000183"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR000183-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR000183-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR000183-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="SMART" id="SM01002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="SMART" id="SM01003"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ70990.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="379" mass="39084" checksum="65C2976CDD387B85" modified="2015-12-09" version="1">MRIGVPKEIKNNEFRVGLTPDSVHEMTAHGHEVFVETNAGAGIGASDADYEVSGAKILATAQEIFDAAEMIIKVKEPQAVERAMLRPHHILFTYLHLAPDEAQTADLVKSGATCIAYETVVDSQGGLPLLVPMSQVAGRLSVTAGAKCLEKINGGSGVLVGGVPGVEPAKVVVIGGGVVGSHAITMALGLGADVTVLDRNTQVLSNLSQTFGSALKTVYSTKAALEKQVLAADIVVGAVLVAGAAAPKLVTAEMISKMKPGSVVVDVAIDQGGCFETSKATTHSEPTYIVDEVVHYCVANMPGAVPRTSTYALNNATLPFALALADKGAKKALLDDANFLPGLNVHQGKVTCEAVASALGYDYVDPESALNSLSASQAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9W3</accession>
    <name>A0A0M7A9W3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02756</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71252.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672316.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02756"/>
    <dbReference type="EnsemblBacteria" id="CTQ71252">
        <property type="protein sequence ID" value="CTQ71252"/>
        <property type="gene ID" value="LAX5112_02756"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025738">
        <property type="entry name" value="BatD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR40940">
        <property type="entry name" value="PTHR40940"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809224" evidence="2">
        <location>
            <begin position="20"/>
            <end position="431"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="407"/>
            <end position="431"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ71252.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="431" mass="46342" checksum="E77D34785AB6891E" modified="2015-12-09" version="1">MIRAILALCLLLFTAAVQAQEAPQPIVRTTLEKDTAIPGQPLIFRVTILVPTWMPAPPVFPSFEAPNVVVRLPSRASSPTSERVNGDTWSGVSRAYRLYPMVPGTFQVPGGPITTTYADPETREPIKAEVDVAPFAITGEAPDSAKDLTPFLAANALTLTRQVDGTPGDLTAGDALTLTTTIKVTGVFPMFVAPIGAGDPVEGLSYYPASPVLKETENRGQIFGTRTETLTIVAENTGTYQVPEQKLSWYNLTSKKVETASVPAIDLNVTGPPLAAEPQSEALNWQSIASSGAAALLLIGILVGLLHKFGPQAAALFQAAKAKYEATEYFAYRHFKKALNTQDYSSAMTRGIIWKHRLDTTKAQPDWAPLERDFTALGSALFSSEGQISNSAIRKAWAQVETTAAEVRHQAKSRTRPGSKTPLPPLNPVGY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9X1</accession>
    <name>A0A0M7A9X1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 5">Adenine deaminase</fullName>
            <shortName evidence="5">Adenase</shortName>
            <shortName evidence="5">Adenine aminase</shortName>
            <ecNumber evidence="3 5">3.5.4.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 8" type="primary">ade</name>
        <name evidence="8" type="ORF">LAX5112_02693</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 5">
            <text>adenine + H(+) + H2O = hypoxanthine + NH4(+)</text>
            <dbReference type="Rhea" id="RHEA:23688"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16708"/>
            <dbReference type="ChEBI" id="CHEBI:17368"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="EC" id="3.5.4.2"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="5">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family.</text>
    </comment>
    <dbReference type="EC" id="3.5.4.2" evidence="3 5"/>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71030.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672251.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02693"/>
    <dbReference type="EnsemblBacteria" id="CTQ71030">
        <property type="protein sequence ID" value="CTQ71030"/>
        <property type="gene ID" value="LAX5112_02693"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000034">
        <property type="term" value="F:adenine deaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006146">
        <property type="term" value="P:adenine catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01295">
        <property type="entry name" value="AdeC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01518">
        <property type="entry name" value="Adenine_deamin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006679">
        <property type="entry name" value="Adenine_deam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026912">
        <property type="entry name" value="Adenine_deam_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006680">
        <property type="entry name" value="Amidohydro-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011059">
        <property type="entry name" value="Metal-dep_hydrolase_composite"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032466">
        <property type="entry name" value="Metal_Hydrolase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11113:SF2">
        <property type="entry name" value="PTHR11113:SF2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13382">
        <property type="entry name" value="Adenine_deam_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01979">
        <property type="entry name" value="Amidohydro_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51338">
        <property type="entry name" value="SSF51338"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51556">
        <property type="entry name" value="SSF51556"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01178">
        <property type="entry name" value="ade"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5 8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-0464">Manganese</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Amidohydro-rel" evidence="6">
        <location>
            <begin position="72"/>
            <end position="350"/>
        </location>
    </feature>
    <feature type="domain" description="Adenine_deam_C" evidence="7">
        <location>
            <begin position="400"/>
            <end position="567"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006773"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012782"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01518"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF01979"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF13382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ71030.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="573" mass="60637" checksum="44880E0645429195" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9Z5</accession>
    <name>A0A0M7A9Z5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02822</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71437.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672426.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ71437">
        <property type="protein sequence ID" value="CTQ71437"/>
        <property type="gene ID" value="LAX5112_02822"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809350" evidence="1">
        <location>
            <begin position="20"/>
            <end position="197"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71437.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="197" mass="21768" checksum="BF9AC0008F893622" modified="2015-12-09" version="1">MLKQLAVLAVLGAITGSTANGQDHSAYHTSPYAGFEERKIKSLSEQDITELQRGGGWGFALPAELNGLPGPAHVLEHKDDLGLSMEQIVAVQAIYDEMKQEAIDGGERFIEAEAALSRAFESEDLSEVDLRSRIEAAEKARADLRYVHLSRHLSTAKLMTEDQIRQYIMSRGYAEDPCTSVPEGHSAEMWRKHNGCK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAJ2</accession>
    <name>A0A0M7AAJ2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">ATP synthase subunit delta</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">ATP synthase F(1) sector subunit delta</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">F-type ATPase subunit delta</fullName>
            <shortName evidence="7">F-ATPase subunit delta</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7 8" type="primary">atpH</name>
        <name evidence="8" type="ORF">LAX5112_02891</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.</text>
    </comment>
    <comment type="function">
        <text evidence="7">This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cell membrane</location>
            <topology evidence="7">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the ATPase delta chain family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71637.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672405.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02891"/>
    <dbReference type="EnsemblBacteria" id="CTQ71637">
        <property type="protein sequence ID" value="CTQ71637"/>
        <property type="gene ID" value="LAX5112_02891"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045261">
        <property type="term" value="C:proton-transporting ATP synthase complex, catalytic core F(1)"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046933">
        <property type="term" value="F:proton-transporting ATP synthase activity, rotational mechanism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.520.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01416">
        <property type="entry name" value="ATP_synth_delta_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026015">
        <property type="entry name" value="ATP_synth_OSCP/delta_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020781">
        <property type="entry name" value="ATPase_OSCP/d_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000711">
        <property type="entry name" value="ATPase_OSCP/dsu"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11910">
        <property type="entry name" value="PTHR11910"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00213">
        <property type="entry name" value="OSCP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00125">
        <property type="entry name" value="ATPASEDELTA"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47928">
        <property type="entry name" value="SSF47928"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01145">
        <property type="entry name" value="ATP_synt_delta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00389">
        <property type="entry name" value="ATPASE_DELTA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0066">ATP synthesis</keyword>
    <keyword evidence="7" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 7" id="KW-0139">CF(1)</keyword>
    <keyword evidence="2 7" id="KW-0375">Hydrogen ion transport</keyword>
    <keyword evidence="3 7" id="KW-0406">Ion transport</keyword>
    <keyword evidence="4 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 7" id="KW-0813">Transport</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022781"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023196"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023310"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01416"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ71637.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="186" mass="19589" checksum="18ADB5771BFD8F00" modified="2015-12-09" version="1">MTDNVSLVSGVAQRYASALLDLAEGDGVTADVERDLTAFEGMLSESEDLVRLVKSPAFSAEEQLAALAALLDKAGIKGLAANFVKLAARNRRLFVLPDMIKSFRALLAEKRGEETAEVVSATALSDEHVAALKEALSASTGKSVNIAAKVDPALIGGLVVKVGSRMIDTSLRTKLNSLKFAMKEVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AB44</accession>
    <name>A0A0M7AB44_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02823</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71440.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672355.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02823"/>
    <dbReference type="EnsemblBacteria" id="CTQ71440">
        <property type="protein sequence ID" value="CTQ71440"/>
        <property type="gene ID" value="LAX5112_02823"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ71440.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="208" mass="22584" checksum="2F45FB10120AD441" modified="2015-12-09" version="1">MVAHKTPARPGITKLVLILVLGGLMSACGHVPLATIAKLSQFDMLETDPGALRLAVKYPDAIRIPEGGATMALTIKRKADGAVLMEEKLAFEETDSKADKAELSQELQTGYRLEIYRIPEENVPFFRSFQKHMASMSKSDREKVEGSLSIGVTGCLLTDEKPSEVRVSTFLKAAELGGFVTLLRNFDLEEQMAEIGDGGGLERCPDAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABP1</accession>
    <name>A0A0M7ABP1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Putative photosynthetic complex assembly protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02953</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71862.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672466.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02953"/>
    <dbReference type="EnsemblBacteria" id="CTQ71862">
        <property type="protein sequence ID" value="CTQ71862"/>
        <property type="gene ID" value="LAX5112_02953"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017495">
        <property type="entry name" value="Photo_alph_chp1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03054">
        <property type="entry name" value="photo_alph_chp1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ71862.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="164" mass="17639" checksum="5FB62664E14AFB07" modified="2015-12-09" version="1">MPSVSHLGYFSDRKGRRGKQFPRRILIGTALLLSFAVAAVVFGQTTGIGVVKHQTGAPVAIRDILITRDAADIVTVTDARSGVVVSAFEKDTGGFVRGSLRAFERMRMVAKVPATAPYRLIQWETGAVSLSDTAIGERIYLEAFGKDNAAAFAALLETREGARK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABS8</accession>
    <name>A0A0M7ABS8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Protein-glutamate O-methyltransferase</fullName>
            <ecNumber evidence="2">2.1.1.80</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">cheR</name>
        <name evidence="7" type="ORF">LAX5112_03225</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>L-glutamyl-[protein] + S-adenosyl-L-methionine = [protein]-L-glutamate 5-O-methyl ester + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:24452"/>
            <dbReference type="Rhea" id="RHEA-COMP:10208"/>
            <dbReference type="Rhea" id="RHEA-COMP:10311"/>
            <dbReference type="ChEBI" id="CHEBI:29973"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:82795"/>
            <dbReference type="EC" id="2.1.1.80"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.1.1.80" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72558.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672653.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03225"/>
    <dbReference type="EnsemblBacteria" id="CTQ72558">
        <property type="protein sequence ID" value="CTQ72558"/>
        <property type="gene ID" value="LAX5112_03225"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008983">
        <property type="term" value="F:protein-glutamate O-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.155.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022642">
        <property type="entry name" value="CheR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000780">
        <property type="entry name" value="CheR_MeTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022641">
        <property type="entry name" value="CheR_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036804">
        <property type="entry name" value="CheR_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01739">
        <property type="entry name" value="CheR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03705">
        <property type="entry name" value="CheR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00996">
        <property type="entry name" value="CHERMTFRASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM00138">
        <property type="entry name" value="MeTrc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50123">
        <property type="entry name" value="CHER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 7" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="4 7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="CheR-type methyltransferase" evidence="6">
        <location>
            <begin position="1"/>
            <end position="267"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001541"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012534"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ72558.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="295" mass="33009" checksum="0B0A468B55E45DEF" modified="2015-12-09" version="1">MTPLEFDFLKTFLKTRSGLVLSNDKQYLVESRLLPIARSSKLETLSALIQSLQKGGNRALETEVVEAMTTNESFFFRDKTPFEHFKETMLPAMLQNRATRKQMKIWCAAASTGQEPYSLAICLKEAAAKVGGWRIRILGTDLSQEVLEKAKTGLYSQFEVQRGLPIQLLLKYFDQKGDMWQINAGLRAMIEWKKLNLLEQFSHIGEFDIVFCRNVLIYFDQPTKTEILDRIAKALPDDGFLVLGAAETVVGLTDAFKPVPGKRGLFQKKQAAQAATRPALAGATSRLAVGATTLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABT1</accession>
    <name>A0A0M7ABT1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6 8">3-dehydroquinate dehydratase</fullName>
            <shortName evidence="8">3-dehydroquinase</shortName>
            <ecNumber evidence="6 8">4.2.1.10</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">Type II DHQase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8 12" type="primary">aroQ</name>
        <name evidence="12" type="ORF">LAX5112_03056</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2 8">Catalyzes a trans-dehydration via an enolate intermediate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 8">
            <text>3-dehydroquinate = 3-dehydroshikimate + H2O</text>
            <dbReference type="Rhea" id="RHEA:21096"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16630"/>
            <dbReference type="ChEBI" id="CHEBI:32364"/>
            <dbReference type="EC" id="4.2.1.10"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3 8">Metabolic intermediate biosynthesis; chorismate biosynthesis; chorismate from D-erythrose 4-phosphate and phosphoenolpyruvate: step 3/7.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5 8">Homododecamer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4 8">Belongs to the type-II 3-dehydroquinase family.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.10" evidence="6 8"/>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72107.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672558.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03056"/>
    <dbReference type="EnsemblBacteria" id="CTQ72107">
        <property type="protein sequence ID" value="CTQ72107"/>
        <property type="gene ID" value="LAX5112_03056"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00053">
        <property type="reaction ID" value="UER00086"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003855">
        <property type="term" value="F:3-dehydroquinate dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009073">
        <property type="term" value="P:aromatic amino acid family biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008652">
        <property type="term" value="P:cellular amino acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009423">
        <property type="term" value="P:chorismate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd00466">
        <property type="entry name" value="DHQase_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.9100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00169">
        <property type="entry name" value="AroQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001874">
        <property type="entry name" value="DHquinase_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018509">
        <property type="entry name" value="DHquinase_II_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036441">
        <property type="entry name" value="DHquinase_II_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21272">
        <property type="entry name" value="PTHR21272"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01220">
        <property type="entry name" value="DHquinase_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001399">
        <property type="entry name" value="DHquinase_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52304">
        <property type="entry name" value="SSF52304"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01088">
        <property type="entry name" value="aroQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01029">
        <property type="entry name" value="DEHYDROQUINASE_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="8" id="KW-0057">Aromatic amino acid biosynthesis</keyword>
    <keyword evidence="7 8 12" id="KW-0456">Lyase</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Substrate binding" evidence="8 10">
        <location>
            <begin position="102"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="8 9">
        <location>
            <position position="24"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="8 9">
        <location>
            <position position="101"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8 10">
        <location>
            <position position="75"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8 10">
        <location>
            <position position="81"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8 10">
        <location>
            <position position="88"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8 10">
        <location>
            <position position="112"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="site" description="Transition state stabilizer" evidence="8 11">
        <location>
            <position position="19"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001864"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00003924"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004902"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011037"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00011193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00012060"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR001399-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR001399-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRSR" id="PIRSR001399-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ72107.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="147" mass="15982" checksum="12F7D6DAEA183923" modified="2015-12-09" version="1">MTPVVYVLNGPNLNLLGKRQPEIYGAQTLDDVEELCRSAAVRLGLTADCRQSNAEHELIDWIQEAREKAAAIVINPAAYSHTSVAILDALNACDFPVIEVHISNIHKREEFRQRSYVSSRADAVIAGCGVQGYELALTHAAALVRGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACS0</accession>
    <name>A0A0M7ACS0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Ribosomal RNA small subunit methyltransferase C</fullName>
            <ecNumber evidence="2">2.1.1.172</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">rsmC</name>
        <name evidence="2" type="ORF">LAX5112_03346</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.1.1.172" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72878.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672760.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03346"/>
    <dbReference type="EnsemblBacteria" id="CTQ72878">
        <property type="protein sequence ID" value="CTQ72878"/>
        <property type="gene ID" value="LAX5112_03346"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052914">
        <property type="term" value="F:16S rRNA (guanine(1207)-N(2))-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002052">
        <property type="entry name" value="DNA_methylase_N6_adenine_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007848">
        <property type="entry name" value="Small_mtfrase_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05175">
        <property type="entry name" value="MTS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00092">
        <property type="entry name" value="N6_MTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="MTS" evidence="1">
        <location>
            <begin position="172"/>
            <end position="339"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF05175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72878.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="347" mass="37317" checksum="F7CD0B981DC326AF" modified="2015-12-09" version="1">MSDPALETLVLPISSGDVELPDRARILVLRARAGRPLKDLEPHEVVCEQSFAPDRDALQKAGFKVDAETQEDGFDAVLVLPGRQRQEARALLARAAARTKPGGSVIACAPNTEGAKTLEHDFSALFGSADKLSKNKCRVVWAPVDTTSLDTALMTDWSGLDAPRPVLDGAYISRPGVFAWDRIDPASRLLAENLPDSLSGRGADLGAGFGYLSRQVLEKAPKVAAFDLYEAEKRALDLAEQNLAPFKGKKAMTGVWSDVTKGIEGPYDFLVSNPPFHQSGKADRADVGQGFIRAAAQGLRSGGVFYLVANRHLPYERTLGEVFDRVEMLADAGGYKVIKATKGKGGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AD91</accession>
    <name>A0A0M7AD91_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Zn(II)-responsive regulator of zntA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">zntR_2</name>
        <name evidence="2" type="ORF">LAX5112_02880</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71604.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672396.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02880"/>
    <dbReference type="EnsemblBacteria" id="CTQ71604">
        <property type="protein sequence ID" value="CTQ71604"/>
        <property type="gene ID" value="LAX5112_02880"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009061">
        <property type="entry name" value="DNA-bd_dom_put_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000551">
        <property type="entry name" value="MerR-type_HTH_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13411">
        <property type="entry name" value="MerR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00040">
        <property type="entry name" value="HTHMERR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00422">
        <property type="entry name" value="HTH_MERR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46955">
        <property type="entry name" value="SSF46955"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00552">
        <property type="entry name" value="HTH_MERR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50937">
        <property type="entry name" value="HTH_MERR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH merR-type" evidence="1">
        <location>
            <begin position="1"/>
            <end position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50937"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71604.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="140" mass="15759" checksum="7EDE606594A8D8E0" modified="2015-12-09" version="1">MDFSIGELSKATGVKVPTIRYYENEGLIEAPIRTEGNQRRYQARDLDRLRFLKHCRDLGLPMEAIRELIDLSLHPDQPCSNANRIAAEQLQAIRARIAHLKKLEKELARISASCTGAHPAADCNILKAFGDHDLCLSDHK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADH0</accession>
    <name>A0A0M7ADH0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Chitooligosaccharide deacetylase</fullName>
            <ecNumber evidence="6">4.1.1.97</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="12">Nodulation protein B</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="14" type="primary">uao</name>
        <name evidence="14" type="ORF">LAX5112_02927</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Is involved in generating a small heat-stable compound (Nod), an acylated oligomer of N-acetylglucosamine, that stimulates mitosis in various plant protoplasts.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>5-hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate + H(+) = (S)-allantoin + CO2</text>
            <dbReference type="Rhea" id="RHEA:26301"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15678"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:58639"/>
            <dbReference type="EC" id="4.1.1.97"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="4">Purine metabolism; urate degradation; (S)-allantoin from urate: step 3/3.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the polysaccharide deacetylase family.</text>
    </comment>
    <dbReference type="EC" id="4.1.1.97" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71783.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672446.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02927"/>
    <dbReference type="EnsemblBacteria" id="CTQ71783">
        <property type="protein sequence ID" value="CTQ71783"/>
        <property type="gene ID" value="LAX5112_02927"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00394">
        <property type="reaction ID" value="UER00652"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016831">
        <property type="term" value="F:carboxy-lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016810">
        <property type="term" value="F:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000255">
        <property type="term" value="P:allantoin metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006144">
        <property type="term" value="P:purine nucleobase metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019628">
        <property type="term" value="P:urate catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd10977">
        <property type="entry name" value="CE4_PuuE_SpCDA1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3330.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011330">
        <property type="entry name" value="Glyco_hydro/deAcase_b/a-brl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002509">
        <property type="entry name" value="NODB_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018020">
        <property type="entry name" value="OHCU_decarboxylase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017580">
        <property type="entry name" value="OHCU_decarboxylase-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036778">
        <property type="entry name" value="OHCU_decarboxylase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017625">
        <property type="entry name" value="PuuE/SpCDA1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09349">
        <property type="entry name" value="OHCU_decarbox"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01522">
        <property type="entry name" value="Polysacc_deac_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF158694">
        <property type="entry name" value="SSF158694"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88713">
        <property type="entry name" value="SSF88713"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03164">
        <property type="entry name" value="UHCUDC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03212">
        <property type="entry name" value="uraD_N-term-dom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51677">
        <property type="entry name" value="NODB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0210">Decarboxylase</keyword>
    <keyword evidence="11" id="KW-0456">Lyase</keyword>
    <keyword evidence="8" id="KW-0536">Nodulation</keyword>
    <keyword evidence="9" id="KW-0659">Purine metabolism</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NodB homology" evidence="13">
        <location>
            <begin position="68"/>
            <end position="286"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00003236"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00004754"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00010973"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00012257"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00020071"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022458"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022631"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022793"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00032976"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS51677"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="CTQ71783.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="471" mass="52726" checksum="363C33230A735431" modified="2015-12-09" version="1">MNRYPRNLRGYGPTPPNANWPNSAKVAVQFVLNYEEGGENCVLHGDPASEAFLSDIPGAAQWPGQRHWNMESMYEYGARAGFWRIHRLFTGADIPLTIYGVATALARNPEQVAAMKSAGWEIASHGLKWIEHKDMDPETERAAIAEAIRLHTEVTGGRPHGWYTGRCSENTVRLVAEEGGFDYISDTYDDDLPYWLDVDGRNQLIIPYTLEANDMRFSVSPGWSSGEDFLEYLKNAFDVLYAEGEAGAPKMMSVGLHCRLIGRPGKISALKKFIDYIQSHTDVWCPRRIEIARHWSETHPPQAFERPSQMDRDTFVAKFGGIFEHSPWIAERAFDLELGPAHDCAAGVHNALCRKFRTASADERLGVLTAHPDLAGKLAAAGRLTAESTNEQAGAGLDMLTDDERETFTKLNSDYVAKHGFPFIIAVRDHSKASILAAFHERIGNDRETEFAEACRQIERIAEFRLMDVLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADH2</accession>
    <name>A0A0M7ADH2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Methyl-accepting chemotaxis protein 4</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">mcp4_14</name>
        <name evidence="8" type="ORF">LAX5112_03191</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the methyl-accepting chemotaxis (MCP) protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72466.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672630.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03191"/>
    <dbReference type="EnsemblBacteria" id="CTQ72466">
        <property type="protein sequence ID" value="CTQ72466"/>
        <property type="gene ID" value="LAX5112_03191"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004089">
        <property type="entry name" value="MCPsignal_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000727">
        <property type="entry name" value="T_SNARE_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00015">
        <property type="entry name" value="MCPsignal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00283">
        <property type="entry name" value="MA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50111">
        <property type="entry name" value="CHEMOTAXIS_TRANSDUC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50192">
        <property type="entry name" value="T_SNARE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 3" id="KW-0807">Transducer</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="330"/>
            <end position="352"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="7">
        <location>
            <begin position="354"/>
            <end position="407"/>
        </location>
    </feature>
    <feature type="domain" description="Methyl-accepting transducer" evidence="5">
        <location>
            <begin position="440"/>
            <end position="683"/>
        </location>
    </feature>
    <feature type="domain" description="T-SNARE coiled-coil homology" evidence="6">
        <location>
            <begin position="599"/>
            <end position="661"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023224"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00029447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ72466.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="703" mass="74276" checksum="C070E69A553111D4" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEC6</accession>
    <name>A0A0M7AEC6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Cbb3-type cytochrome c oxidase subunit II</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_03048</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72093.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008195934.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03048"/>
    <dbReference type="EnsemblBacteria" id="CTQ72093">
        <property type="protein sequence ID" value="CTQ72093"/>
        <property type="gene ID" value="LAX5112_03048"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.760.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009056">
        <property type="entry name" value="Cyt_c-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036909">
        <property type="entry name" value="Cyt_c-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003468">
        <property type="entry name" value="Cyt_c_oxidase_monohaem-su/FixO"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02433">
        <property type="entry name" value="FixO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46626">
        <property type="entry name" value="SSF46626"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00781">
        <property type="entry name" value="ccoO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51007">
        <property type="entry name" value="CYTC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 4" id="KW-0349">Heme</keyword>
    <keyword evidence="3 4" id="KW-0408">Iron</keyword>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="2 4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="15"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="domain" description="Cytochrome c" evidence="6">
        <location>
            <begin position="54"/>
            <end position="229"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00433"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ72093.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="244" mass="27480" checksum="18E596067CF7EC24" modified="2015-12-09" version="1">MSAWKKHEIFEKNSIILVIGILVAISVGGLVEIAPLFYLKSTIEKTEGMRPYTPLELAGREIYIREGCYTCHSQMIRPMRDELERYGHFSLAAESMYDHPFQWGSKRTGPDLARVGGKYSDDWHVEHLIDPRSLVPASIMPGYPFLAETELFTRDIQGHVGANMVVGVPYTDAQHEFAVADAIGQASPDTDGAYDFEERWPNSAVRDFDGNPRKVTEMDALVAYLQVLGTMVDFSIYDNKANLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEQ7</accession>
    <name>A0A0M7AEQ7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Major Facilitator Superfamily protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_03580</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73568.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672941.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03580"/>
    <dbReference type="EnsemblBacteria" id="CTQ73568">
        <property type="protein sequence ID" value="CTQ73568"/>
        <property type="gene ID" value="LAX5112_03580"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="33"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="63"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="87"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="120"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="150"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="236"/>
            <end position="258"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="290"/>
            <end position="315"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="353"/>
            <end position="374"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="6">
        <location>
            <begin position="194"/>
            <end position="383"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ73568.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="383" mass="39821" checksum="BA95931E07C814B4" modified="2015-12-09" version="1">MVAEIAAMSLWFMSAAILPDLTREYPISEFRQAALSSAVQIGFVVGALVSALLGLADRIDPRRFFAFCAITAALFNASLLVSEPGGVVSILARFATGALLAGVYPVGMKIAVGWGQKDRGFLVGTLVGALTFGSAAPHLLALLGGTDWRWSLTVASIASALGGLLCLATTLGPFHGTAPRMDIKAVFSAWTNRKIRYAYIGYLGHMWELYAMWAWIGIALTVSFSAHMAAEDAVSLARLIAFLAIAAGGVACIAAGVFADKVGKANIAILAMAVSGTAALFSAITFGGPVWLTILCVLIWGAAILPDSAQFSALVADFAPAEQAGSLMTFQTALGFALTFLTVQVTPMLANGIGWPAVFGIMSIGPAIGIAGMLRLKRLAPDS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEV7</accession>
    <name>A0A0M7AEV7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Retron-type reverse transcriptase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03598</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73618.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672953.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03598"/>
    <dbReference type="EnsemblBacteria" id="CTQ73618">
        <property type="protein sequence ID" value="CTQ73618"/>
        <property type="gene ID" value="LAX5112_03598"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003964">
        <property type="term" value="F:RNA-directed DNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043502">
        <property type="entry name" value="DNA/RNA_pol_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000477">
        <property type="entry name" value="RT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00078">
        <property type="entry name" value="RVT_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56672">
        <property type="entry name" value="SSF56672"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50878">
        <property type="entry name" value="RT_POL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0695">RNA-directed DNA polymerase</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Reverse transcriptase" evidence="1">
        <location>
            <begin position="1"/>
            <end position="202"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50878"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73618.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="246" mass="28235" checksum="5B0B864050E23E3F" modified="2015-12-09" version="1">MFDNFKYSYWKNGKPIFAPSERGVEWGEKVKGKVEELYRFDDYVYHFKDGSHVKALHEHRKNSYFCRLDIERFFYSVRRNRLKRVLKDIGIRKAEEFAKWSTVKNPYHEGGYVLPYGFIQSPILATLVLTESAVGGYLRRANSDGITVSLYMDDICLSSNDAAELGRSFEGLKAAVGEAGFALNGDKTREPAKLIDIFNCSLESGSTEVLPERIDEFYSVDRTEASVEGFETYVDIVKSHTWRAKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AF48</accession>
    <name>A0A0M7AF48_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Methionine aminotransferase</fullName>
            <ecNumber evidence="2">2.6.1.88</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ybdL</name>
        <name evidence="2" type="ORF">LAX5112_03412</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.6.1.88" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ73036.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03412"/>
    <dbReference type="EnsemblBacteria" id="CTQ73036">
        <property type="protein sequence ID" value="CTQ73036"/>
        <property type="gene ID" value="LAX5112_03412"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008483">
        <property type="term" value="F:transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009058">
        <property type="term" value="P:biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004839">
        <property type="entry name" value="Aminotransferase_I/II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00155">
        <property type="entry name" value="Aminotran_1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Aminotran_1_2" evidence="1">
        <location>
            <begin position="50"/>
            <end position="401"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73036.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="413" mass="44566" checksum="5481D6DA9D3A9661" modified="2015-12-09" version="1">MKASTVRPIQTKQAGANIGDIMKSTNPVFTGIQTTVFETMSRLAMAHGAVNLGQGFPDVDGPEDIRETAAKALMDGPNQYPPMLGLPELRQAVADANKRFYGLKIDPQTEVLVTSGATEALSDAIMSLVSPGDEVVLIEPLYDCYLPLVERAGGIAVRVRVTPPHWHLDEDDLKAAFSEKTKAVLINNPMNPTAKVFSDAELGLIADLCKQHDAYAICDEVYEHLVFDGHKHRPLMTFDGMRERTIRIGSAGKTFSLTGWKVGYITGPASMLDPIAKAHQWTTFTTPPNLQKAVAYGIGKDDNYYQGLADDLSAKRDRMAKGLSALGFEVLPCAATYFLTCGIAGTGLGDNDVEACEILVKEAGVAAVPLSAFYGSDAPTGFIRFCFCKQDAVIDEALERLSRFLTAAHAESA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFF9</accession>
    <name>A0A0M7AFF9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03602</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73629.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672957.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ73629">
        <property type="protein sequence ID" value="CTQ73629"/>
        <property type="gene ID" value="LAX5112_03602"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="36"/>
            <end position="51"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73629.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="118" mass="13446" checksum="EECE0813FAA53D68" modified="2015-12-09" version="1">MTESDVHNDKIRFPERGQESVHEGRWGETGGIQAIRPLRSRTSQSLKPSSAFGQGFRDWLRWILTPPLTHLWPSRSAYRPAGKPLKGHARERAWTAISASFTRSTSVEKMASQFDNRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFV8</accession>
    <name>A0A0M7AFV8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Ornithine cyclodeaminase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03561</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ornithine cyclodeaminase/mu-crystallin family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73517.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672931.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03561"/>
    <dbReference type="EnsemblBacteria" id="CTQ73517">
        <property type="protein sequence ID" value="CTQ73517"/>
        <property type="gene ID" value="LAX5112_03561"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1780.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003462">
        <property type="entry name" value="ODC_Mu_crystall"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023401">
        <property type="entry name" value="ODC_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13812">
        <property type="entry name" value="PTHR13812"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02423">
        <property type="entry name" value="OCD_Mu_crystall"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008903"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73517.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="302" mass="32389" checksum="029AD470567CEF91" modified="2015-12-09" version="1">MRIISSSNIDLGLSDRDAIEILRQGYRSSAQLCAPLTASIPRPDMQAGNLAVQPAWSDFAGQGHIDRGYVGCSLSLALPEHIGAPSGLYVLFSGKGGQPIALLDGVRLATWRDAGLHALAAAYLSREDAHRLLVIGSDPRLPRLISAYSAVRNITSILFAGTDKEIRRRITGISELSHVSAGVTEDISSALEGADIVCLAGPEAGSNEWMDLSKFDPPAGCHVDALMANPPVPDTLWQEARLFTTNLKSAPRTNCEWTAGLEELARGDRAGRRYYGQRTLFVPCPDTGLADFVLAAHVFLKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGI2</accession>
    <name>A0A0M7AGI2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03570</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73542.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040452763.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03570"/>
    <dbReference type="EnsemblBacteria" id="CTQ73542">
        <property type="protein sequence ID" value="CTQ73542"/>
        <property type="gene ID" value="LAX5112_03570"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012644">
        <property type="entry name" value="CHP02300_FYDLN_acid"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09538">
        <property type="entry name" value="FYDLN_acid"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02300">
        <property type="entry name" value="FYDLN_acid"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="44"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="54"/>
            <end position="120"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73542.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="130" mass="14154" checksum="66162C6E20A66E48" modified="2015-12-09" version="1">MAKPELGTKRLCPGCGAKYYDLNRDPITCPKCGTIFETVMTSRAAKAAKVEEKPEDDEEEDDAAAPEIVTLEEADAEAEGGDDDVPDIEGDDVELEDDDSADDDVFIDEDDEDDEAVPGIRVEVDDDPDR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGT2</accession>
    <name>A0A0M7AGT2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DinB family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03314</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the DinB family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72814.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672736.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03314"/>
    <dbReference type="EnsemblBacteria" id="CTQ72814">
        <property type="protein sequence ID" value="CTQ72814"/>
        <property type="gene ID" value="LAX5112_03314"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.450">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007837">
        <property type="entry name" value="DinB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034660">
        <property type="entry name" value="DinB/YfiT-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37302">
        <property type="entry name" value="PTHR37302"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05163">
        <property type="entry name" value="DinB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF109854">
        <property type="entry name" value="SSF109854"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008635"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72814.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="183" mass="20780" checksum="9DABE58F697A1879" modified="2015-12-09" version="1">MSAALDHLRLMARNNAYANERLYEACCKLSQVEFEAERTNFFPSLLETLNHNWEVDRYYLDALTEGGEGLAVFEVPFLRDANDLAMAQADLDRQLIAFCDGLRASDLEREIAQDRGAKGTVKETIAATLLHLFQHQIHHRGQAHALLAGTSVAPPQLDEFFLNFERHPAAQRHIDTFSREENL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHY3</accession>
    <name>A0A0M7AHY3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="12">D-alanyl-D-alanine carboxypeptidase DacA</fullName>
            <ecNumber evidence="12">3.4.16.4</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">dacA_2</name>
        <name evidence="12" type="ORF">LAX5112_03741</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 8">Belongs to the peptidase S11 family.</text>
    </comment>
    <dbReference type="EC" id="3.4.16.4" evidence="12"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74052.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673134.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03741"/>
    <dbReference type="EnsemblBacteria" id="CTQ74052">
        <property type="protein sequence ID" value="CTQ74052"/>
        <property type="gene ID" value="LAX5112_03741"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009002">
        <property type="term" value="F:serine-type D-Ala-D-Ala carboxypeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008360">
        <property type="term" value="P:regulation of cell shape"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.710.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012338">
        <property type="entry name" value="Beta-lactam/transpept-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018044">
        <property type="entry name" value="Peptidase_S11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001967">
        <property type="entry name" value="Peptidase_S11_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00768">
        <property type="entry name" value="Peptidase_S11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00725">
        <property type="entry name" value="DADACBPTASE1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56601">
        <property type="entry name" value="SSF56601"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="12" id="KW-0121">Carboxypeptidase</keyword>
    <keyword evidence="3" id="KW-0133">Cell shape</keyword>
    <keyword evidence="5" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="12" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0573">Peptidoglycan synthesis</keyword>
    <keyword evidence="12" id="KW-0645">Protease</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 10" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="10">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809361" evidence="10">
        <location>
            <begin position="31"/>
            <end position="473"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_S11" evidence="11">
        <location>
            <begin position="29"/>
            <end position="252"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="272"/>
            <end position="293"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="413"/>
            <end position="473"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="9">
        <location>
            <begin position="413"/>
            <end position="445"/>
        </location>
    </feature>
    <feature type="active site" description="Acyl-ester intermediate" evidence="6">
        <location>
            <position position="59"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="6">
        <location>
            <position position="62"/>
        </location>
    </feature>
    <feature type="active site" evidence="6">
        <location>
            <position position="119"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="222"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007164"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR618044-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR618044-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU004016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF00768"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ74052.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="473" mass="50731" checksum="FDC5E0846947C744" modified="2015-12-09" version="1">MYASLFGRRSALPILAAALGFFLMAAPARAEIGTYILVDARNGAVVDQKNATRKWYPASLTKMMTAYVTFKAIREGRVALDSAVVQSKNSAAEPPSKMGFKVGTKFTIDTALKIILIKSANDVSVALGEAVSGSENAFLAEMNAEARRLGMTNTRFTNPHGLPDNRQVTTARDMAILAMALRKDFPESREFYKHPGIRFGKKTLRSANREFLLRVPGANGMKTGYICNSGFNVASSVTRRGRTLIAIIMGASSGLERTAFARQLFDEGFRKGSRGQNVKSLSGSSGNPPADGYCRRNKKLSSKQYMARYDMQNEPSGGGLLFFGKQKNPTEAKIDTSSFTKSNGKPDWAKILDRTLGPRRVAYKPLPVGLGNPKGTPVVSASVPAEDIPLPTANPIRLAEIKIRNQLQTAQPVGATGTPQTAQAGAGSIPQVEATAQQPGSAVDKSRTAPGSIFRKGLDFTVPVPAPSPSRSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AI68</accession>
    <name>A0A0M7AI68_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_03909</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74579.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673211.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03909"/>
    <dbReference type="EnsemblBacteria" id="CTQ74579">
        <property type="protein sequence ID" value="CTQ74579"/>
        <property type="gene ID" value="LAX5112_03909"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.600">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1610">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010621">
        <property type="entry name" value="DUF1214"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037049">
        <property type="entry name" value="DUF1214_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010679">
        <property type="entry name" value="DUF1254"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037050">
        <property type="entry name" value="DUF1254_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06742">
        <property type="entry name" value="DUF1214"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06863">
        <property type="entry name" value="DUF1254"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809461" evidence="1">
        <location>
            <begin position="28"/>
            <end position="511"/>
        </location>
    </feature>
    <feature type="domain" description="DUF1254" evidence="3">
        <location>
            <begin position="114"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="domain" description="DUF1214" evidence="2">
        <location>
            <begin position="389"/>
            <end position="494"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF06742"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF06863"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ74579.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="511" mass="56448" checksum="99863E7F770175F0" modified="2015-12-09" version="1">MPHLQQWIAGAAAGVLAASLSLVPLSAQEPPKMKMTTEIPDGITTPDNIETQLGDLTFFDGVPDADTTEKIYNLYDFSQAYQAYLNGLKIASMDAMLRGIEEWGPANTTVVQFAELMDSKALFLTPNTTSVYQTAVLRMGDEPMVVETPPNVLGFINNAWFKYVMDFGNLGPDEGKGGKYLILPPGFEGEVSTDGYTDVVQTDTYAHWVLWRGYLDESGSPETAVSQTQEQFRIYPLSQADTPPEMTFVDVSGKEFNTIHLMDARMFEEINNVIQAEPLYGESPELLGYLAAIGIIKGQDFAPDTRMQSILERAAAAGAVTVKTLISKPRDELAYWYPGESNWQNAFPGGAYTFTIDGAMKHDFRSAFHFYATGITPAMAFKSPGKGSQYAFTYRDADGNALDGSKTYKLNVPANVPAKDFWSFTLYDNQTRSMLQTDKQFPALGSNDAGLVQNDDGSTDIYFGPEAPEGKESNWLQTVPGKGWNTIMRIYGPLEPWFDQTWRPGEIALVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AI88</accession>
    <name>A0A0M7AI88_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03916</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74599.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673218.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74599">
        <property type="protein sequence ID" value="CTQ74599"/>
        <property type="gene ID" value="LAX5112_03916"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809348" evidence="1">
        <location>
            <begin position="29"/>
            <end position="269"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74599.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="269" mass="28999" checksum="D9B6ED65DF4FF54B" modified="2015-12-09" version="1">MTCKKLRLGHIGLLLLASVILLPGSAGAQQPDTVKLYLNYLPHRLTETSGKQYDLLLDVALSGKLAQVPRGAAPLNRARALFLGDTGSCLFPTNIMGLDAGDQTATLIASHPVDIVSLRVYTTTNGASFTSLSDFDPYRVGYIEGSGSIHGLADAEKFYPIPSEEQLIEMLSLGRLDAFLGHHPDTALALEELGKPDALRVSPITLHNIRLPISFVCHDNEPGRAFVAAINSRISDLQKSGQIRSILGPHAELAAEAADRDEKPEDMIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJ67</accession>
    <name>A0A0M7AJ67_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03666</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73813.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ73813">
        <property type="protein sequence ID" value="CTQ73813"/>
        <property type="gene ID" value="LAX5112_03666"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ73813.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="29" mass="3151" checksum="5DC3EEFABA9D0FFE" modified="2015-12-09" version="1">MGHALHLSGSDLSEIQFETDMNRTASSCL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJ91</accession>
    <name>A0A0M7AJ91_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Periplasmic serine endoprotease DegP</fullName>
            <ecNumber evidence="4">3.4.21.107</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">degP</name>
        <name evidence="4" type="ORF">LAX5112_04052</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase S1C family.</text>
    </comment>
    <dbReference type="EC" id="3.4.21.107" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ74949.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673339.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04052"/>
    <dbReference type="EnsemblBacteria" id="CTQ74949">
        <property type="protein sequence ID" value="CTQ74949"/>
        <property type="gene ID" value="LAX5112_04052"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004252">
        <property type="term" value="F:serine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.42.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.10.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001478">
        <property type="entry name" value="PDZ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036034">
        <property type="entry name" value="PDZ_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009003">
        <property type="entry name" value="Peptidase_S1_PA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043504">
        <property type="entry name" value="Peptidase_S1_PA_chymotrypsin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001940">
        <property type="entry name" value="Peptidase_S1C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13180">
        <property type="entry name" value="PDZ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00834">
        <property type="entry name" value="PROTEASES2C"/>
    </dbReference>
    <dbReference type="SMART" id="SM00228">
        <property type="entry name" value="PDZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="SSF48452"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50156">
        <property type="entry name" value="SSF50156"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50494">
        <property type="entry name" value="SSF50494"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50106">
        <property type="entry name" value="PDZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0645">Protease</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809538" evidence="2">
        <location>
            <begin position="25"/>
            <end position="683"/>
        </location>
    </feature>
    <feature type="domain" description="PDZ" evidence="3">
        <location>
            <begin position="231"/>
            <end position="306"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010541"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50106"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ74949.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="683" mass="70490" checksum="3178194DE23F78DD" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJE3</accession>
    <name>A0A0M7AJE3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">HTH domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03630</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73704.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672979.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03630"/>
    <dbReference type="EnsemblBacteria" id="CTQ73704">
        <property type="protein sequence ID" value="CTQ73704"/>
        <property type="gene ID" value="LAX5112_03630"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013196">
        <property type="entry name" value="HTH_11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028349">
        <property type="entry name" value="PafC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026881">
        <property type="entry name" value="WYL_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08279">
        <property type="entry name" value="HTH_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13280">
        <property type="entry name" value="WYL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF016838">
        <property type="entry name" value="PafC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH_11" evidence="1">
        <location>
            <begin position="10"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="domain" description="WYL" evidence="2">
        <location>
            <begin position="156"/>
            <end position="328"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08279"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13280"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ73704.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="341" mass="37938" checksum="D8344B660196992E" modified="2015-12-09" version="1">MNPIERALGILLLLTGGKLVPATVLAERFHVSLRTVYRDIDRLIALGVPIDAERGAEGGYRLAKGYLQPPVALTRNETAALLTAMALVRSSRTVPLANDLSSAEQKLLATLPKAVHGLLKDAERIVGIEPIPPDIFHSGTKAEATDAWQSALDGFMTGILEARRVRFDHVNPSRQTRKSHDVEPQGVMFDRDLWYLAGRCVDTDTLKVYRADRVHDLEISGFRFRPPKDFSIQSLLGGAWLSHAMRRWEQEDKISKIRLTARQAKRLSADWYYRHAVFTPIANGEILISIPSVDPGRILPLVRWLGPGAELLEPAHLRQKIASEFAALANEHSSSRLEKSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AK38</accession>
    <name>A0A0M7AK38_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04257</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75488.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75488">
        <property type="protein sequence ID" value="CTQ75488"/>
        <property type="gene ID" value="LAX5112_04257"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="15"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="17"/>
            <end position="38"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75488.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="38" mass="4257" checksum="68E5B4F3E882CB50" modified="2015-12-09" version="1">MTPSLTGSCLSAFANGERSKRRNETGQDFFHFGHANKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKM7</accession>
    <name>A0A0M7AKM7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Hemolysin, chromosomal</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">hlyA_2</name>
        <name evidence="2" type="ORF">LAX5112_04233</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75439.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673469.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000021.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75439">
        <property type="protein sequence ID" value="CTQ75439"/>
        <property type="gene ID" value="LAX5112_04233"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.150.10.10">
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043708">
        <property type="entry name" value="DUF5648"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018511">
        <property type="entry name" value="Hemolysin-typ_Ca-bd_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001343">
        <property type="entry name" value="Hemolysn_Ca-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011049">
        <property type="entry name" value="Serralysin-like_metalloprot_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18885">
        <property type="entry name" value="DUF5648"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00353">
        <property type="entry name" value="HemolysinCabind"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51120">
        <property type="entry name" value="SSF51120"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00330">
        <property type="entry name" value="HEMOLYSIN_CALCIUM"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="188"/>
            <end position="212"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75439.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="584" mass="62291" checksum="A1576A89B18D6CBC" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKQ9</accession>
    <name>A0A0M7AKQ9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Fumarate reductase flavoprotein subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ifcA_2</name>
        <name evidence="5" type="ORF">LAX5112_04336</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <dbReference type="EMBL" id="CXWD01000022">
        <property type="protein sequence ID" value="CTQ75708.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673554.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000022.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04336"/>
    <dbReference type="EnsemblBacteria" id="CTQ75708">
        <property type="protein sequence ID" value="CTQ75708"/>
        <property type="gene ID" value="LAX5112_04336"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008152">
        <property type="term" value="P:metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.700.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003953">
        <property type="entry name" value="FAD-binding_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027477">
        <property type="entry name" value="Succ_DH/fumarate_Rdtase_cat_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00890">
        <property type="entry name" value="FAD_binding_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56425">
        <property type="entry name" value="SSF56425"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FAD_binding_2" evidence="4">
        <location>
            <begin position="21"/>
            <end position="431"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00890"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ75708.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="459" mass="48107" checksum="9AC80DFA2B4E2CF1" modified="2015-12-09" version="1">MTQVTVEVSSAPAEFDLDCETLIIGAGAAGLVAALSAQEDGQSVLVIEADPIPRGSTALSAGLIPAAGTSIQKAAGVEDSADFFAQDIQSKAKQENDTALVDLLARQSGPTIDWLSETHGLLFSVITNFDYPGHSQHRMHGLPTRSGIELIDSLRSTCETQGIDIICERRAVQLHTDQGRMTGVTVQRPDGGLETIGCEKLILACNGFGGNRDLVSQFMPEIADGLWFGHDGNRGEAILWGKAIGADMAHLGAYQGHGNVAHPHGILITWAVITSGGVQVNREAERFWNESQGYSEAARAVLAQPGGEAYTIFDGRIAEIARQFEDFKNAEAVGAIKVSDTLEGLADQLGLAGENLTATISSLPLNETDGFGRRFGDTQLAPPYFGVRVTGALFHTQGGLRTDEHARVLKTDGAPILNLHACGGAACGVSGRGDSGYLSGNGLLSAVVLGRLAGQAPLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKV3</accession>
    <name>A0A0M7AKV3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">2-(R)-hydroxypropyl-CoM dehydrogenase</fullName>
            <ecNumber evidence="2">1.1.1.268</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">xecD</name>
        <name evidence="2" type="ORF">LAX5112_04351</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the short-chain dehydrogenases/reductases (SDR) family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.268" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75765.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673573.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000023.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04351"/>
    <dbReference type="EnsemblBacteria" id="CTQ75765">
        <property type="protein sequence ID" value="CTQ75765"/>
        <property type="gene ID" value="LAX5112_04351"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050574">
        <property type="term" value="F:2-(R)-hydroxypropyl-CoM dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00106">
        <property type="entry name" value="adh_short"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU000363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75765.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="281" mass="30163" checksum="8F5E173BA3142ACE" modified="2015-12-09" version="1">MSQTVLITGCSSGFGKLAAKTFSANGWNVMATMRSPEKDTELASLPGVALGRLDVVDRKNVHSVVRDTLKRFGRIDCLVNNAGYGGNALFEQFSDLAMNQMFATNVFGPVNTMRAVMPIMRAQKQGVIVNVSSMAGLVGLPGHSFYSASKFALNGLSEGMALESEAFGIRVHLIEPGAYPTTSFNASTEDHLDSGDQQLSDYSRKLRAHIEAIGQQMAQQGGALSNPQEVADKIYACATDPSMPIHNPTGADAEMLEVMIQTAGSRQKFIEQIAAMLLPQQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKX9</accession>
    <name>A0A0M7AKX9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Long-chain-fatty-acid--CoA ligase FadD13</fullName>
            <ecNumber evidence="4">6.2.1.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_04105</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="6.2.1.3" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ75066.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673365.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04105"/>
    <dbReference type="EnsemblBacteria" id="CTQ75066">
        <property type="protein sequence ID" value="CTQ75066"/>
        <property type="gene ID" value="LAX5112_04105"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004467">
        <property type="term" value="F:long-chain fatty acid-CoA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12780">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025110">
        <property type="entry name" value="AMP-bd_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045851">
        <property type="entry name" value="AMP-bd_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020845">
        <property type="entry name" value="AMP-binding_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000873">
        <property type="entry name" value="AMP-dep_Synth/Lig"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042099">
        <property type="entry name" value="ANL_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00501">
        <property type="entry name" value="AMP-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13193">
        <property type="entry name" value="AMP-binding_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00455">
        <property type="entry name" value="AMP_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0007">Acetylation</keyword>
    <keyword evidence="4" id="KW-0436">Ligase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AMP-binding" evidence="2">
        <location>
            <begin position="17"/>
            <end position="424"/>
        </location>
    </feature>
    <feature type="domain" description="AMP-binding_C" evidence="3">
        <location>
            <begin position="435"/>
            <end position="510"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022990"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF13193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ75066.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="526" mass="57383" checksum="984D0F7CF7E359FA" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALD1</accession>
    <name>A0A0M7ALD1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04412</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75928.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673622.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000023.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75928">
        <property type="protein sequence ID" value="CTQ75928"/>
        <property type="gene ID" value="LAX5112_04412"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="9"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="33"/>
            <end position="54"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75928.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="82" mass="8855" checksum="53109CD8EE0CB7E0" modified="2015-12-09" version="1">MTKTFKREVAVIMFGFLMLLCIFDLLTGGETTAYQWAELLALPIFGFGVAAFGLDAAAKQLPIGGQGARQMQPPMPPEGYAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALF0</accession>
    <name>A0A0M7ALF0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Ion channel</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_04420</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75948.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04420"/>
    <dbReference type="EnsemblBacteria" id="CTQ75948">
        <property type="protein sequence ID" value="CTQ75948"/>
        <property type="gene ID" value="LAX5112_04420"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013099">
        <property type="entry name" value="K_chnl_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07885">
        <property type="entry name" value="Ion_trans_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="43"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="76"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="138"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="domain" description="Ion_trans_2" evidence="2">
        <location>
            <begin position="110"/>
            <end position="162"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ75948.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="175" mass="19709" checksum="A305AC0985E16A42" modified="2015-12-09" version="1">MKKLNLSDFYERYRRVISGLLASLVLTPFLLINDYNENSDLGIFQYAVVLFVAMLVLSNFYWAAKDVLLEGFRLRFILNLVFLNYLTIVVFADAYARSGVFNSGGDIVRDGAVALYFSTVTWTTLGYGDYRPQGFGMFLAPLQAVLGMYSVALVFGLIVGAVVRFETEKRNSDDQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AM37</accession>
    <name>A0A0M7AM37_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04264</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75502.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75502">
        <property type="protein sequence ID" value="CTQ75502"/>
        <property type="gene ID" value="LAX5112_04264"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ75502.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="81" mass="8872" checksum="78FC926F326B48E0" modified="2015-12-09" version="1">MLCSIAVSVNNDNDHDVIHHANRNLACFAIIKAIVDARDAKTIEDLCSVNKVDTMLLDVLLSLVVIPTELHKSSLCNESDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AM53</accession>
    <name>A0A0M7AM53_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Demethylmenaquinone methyltransferase</fullName>
            <ecNumber evidence="2">2.1.1.163</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ubiE_7</name>
        <name evidence="2" type="ORF">LAX5112_04266</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.1.1.163" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75506.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75506">
        <property type="protein sequence ID" value="CTQ75506"/>
        <property type="gene ID" value="LAX5112_04266"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043770">
        <property type="term" value="F:demethylmenaquinone methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102094">
        <property type="term" value="F:S-adenosylmethionine:2-demethylmenaquinol methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102955">
        <property type="term" value="F:S-adenosylmethionine:2-demethylmenaquinol-7 methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102027">
        <property type="term" value="F:S-adenosylmethionine:2-demethylquinol-8 methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013216">
        <property type="entry name" value="Methyltransf_11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08241">
        <property type="entry name" value="Methyltransf_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Methyltransf_11" evidence="1">
        <location>
            <begin position="52"/>
            <end position="143"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08241"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75506.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="275" mass="29153" checksum="DC492288EF311F03" modified="2015-12-09" version="1">MTNTEAFERMERDGWQDPGIAKGYAEGFDLATRQAAEVLAETVAPDPGLPALDLCTGHGVVAAELLKRGAVVTALDFSPAMLELARRTAPGATFVEGDVMAMTFPDQSFNAVSIGFGVPHFPDPGKGLREVARVLNPGGRLAFSIWRGKGSNGAFGWLFEAVGRLGDPAVTLPDGPDAHMFAEKEIAEPLLTACGFTGITILELPSRVFVSSPEKLFDAFDKGAVRAASLLGRQPENRRSAIRAELSRRVQDEGTPENGGHLVPAPSVVVSAMRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANM6</accession>
    <name>A0A0M7ANM6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Dihydrothymine dehydrogenase</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Dihydrouracil dehydrogenase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9" type="primary">preA</name>
        <name evidence="9" type="ORF">LAX5112_04477</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the dihydropyrimidine dehydrogenase family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ76131.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673675.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000024.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04477"/>
    <dbReference type="EnsemblBacteria" id="CTQ76131">
        <property type="protein sequence ID" value="CTQ76131"/>
        <property type="gene ID" value="LAX5112_04477"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016627">
        <property type="term" value="F:oxidoreductase activity, acting on the CH-CH group of donors"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006210">
        <property type="term" value="P:thymine catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006212">
        <property type="term" value="P:uracil catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017896">
        <property type="entry name" value="4Fe4S_Fe-S-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017900">
        <property type="entry name" value="4Fe4S_Fe_S_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005720">
        <property type="entry name" value="Dihydroorotate_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044512">
        <property type="entry name" value="DPYD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43073">
        <property type="entry name" value="PTHR43073"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01180">
        <property type="entry name" value="DHO_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01037">
        <property type="entry name" value="pyrD_sub1_fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00198">
        <property type="entry name" value="4FE4S_FER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51379">
        <property type="entry name" value="4FE4S_FER_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0408">Iron</keyword>
    <keyword evidence="5" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3 9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="8">
        <location>
            <begin position="337"/>
            <end position="370"/>
        </location>
    </feature>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="8">
        <location>
            <begin position="372"/>
            <end position="402"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010804"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00030119"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00032722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51379"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ76131.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="437" mass="47427" checksum="AB96A08F3456A021" modified="2015-12-09" version="1">MADLTTNFIGIKSPNPFWLASAPPTDKEYNVVRAFKAGWGGVVWKTLGDGDPVVNVNGPRYGAIHGKDRQLIGLNNIELITDRPLEVNLREIKQVKRDWPDRALVVSLMVPCEEQNWIDILKAVEDTEADGVELNFGCPHGMSERGMGSAVGQVPEYIEMVTRWVKKHSRMPCIVKLTPNITDVRKPAQAAKAGGADAVSLINTINSIVSVDLDAMSPAPMVDGKGAHGGYCGPAVKPIALNMVAEIARDPETHGLPISGIGGVTTWRDAAEFMALGAGSVQVCTAAMTYGFKVVEDMIEGLSDWMDEKGYTSVDQVVGRAVPNASDWQHLNLNYIAKAKIDQDLCIQCGRCHIACEDTSHQAITNMVDGARKFEVIDEECVGCNLCVNVCPVENCITMEQMAPGTIDPRTNKVVEDKYANWTTHPNNPMAVPEAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANY4</accession>
    <name>A0A0M7ANY4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04529</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000025">
        <property type="protein sequence ID" value="CTQ76231.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04529"/>
    <dbReference type="EnsemblBacteria" id="CTQ76231">
        <property type="protein sequence ID" value="CTQ76231"/>
        <property type="gene ID" value="LAX5112_04529"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019285">
        <property type="entry name" value="DUF2336"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10098">
        <property type="entry name" value="DUF2336"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ76231.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="363" mass="40435" checksum="E65348072F0136ED" modified="2015-12-09" version="1">MKMSEALKTELVNFSELTGEAASARRAELARHVATLFALTSDRCSDEQVDIYDSVLLRLVDMVESEVRRFVAEQMSTLRRGPEETIRRLASDVIEVSEPILVRSTVLRDADLVSIAEEQGNDHRYAIAQREVLSIDVTDILVRRGDLKVKRKIASNEGASLSGSAIELLISDSAADATLQLSLSDRPDLAEAQIASLISIASDEVRKKLQTSGRSGETAQLDEAADIAARRMSNQYWLGRYDFETARSRILLLAKKGMVNEAALRRFASEDRFAEAVATFAWLVRCGVEEASHWMVRPDPEPFVILAKASGFSSITVGSLLSIGPWRHRLTPETRSHAMNLYERMTVAEAKRKIAHWSYNVLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQ54</accession>
    <name>A0A0M7AQ54_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Aryl-alcohol dehydrogenase</fullName>
            <ecNumber evidence="2">1.1.1.90</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">xylB_2</name>
        <name evidence="2" type="ORF">LAX5112_04629</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.1.1.90" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000027">
        <property type="protein sequence ID" value="CTQ76546.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04629"/>
    <dbReference type="EnsemblBacteria" id="CTQ76546">
        <property type="protein sequence ID" value="CTQ76546"/>
        <property type="gene ID" value="LAX5112_04629"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018456">
        <property type="term" value="F:aryl-alcohol dehydrogenase (NAD+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013154">
        <property type="entry name" value="ADH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011032">
        <property type="entry name" value="GroES-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020843">
        <property type="entry name" value="PKS_ER"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08240">
        <property type="entry name" value="ADH_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00829">
        <property type="entry name" value="PKS_ER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50129">
        <property type="entry name" value="SSF50129"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PKS_ER" evidence="1">
        <location>
            <begin position="13"/>
            <end position="323"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76546.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="325" mass="34008" checksum="8BE228B93B04DC4A" modified="2015-12-09" version="1">MSSMKAVVIREPGGPEALRIESLPVPEPKPGWVLIRVRAFGLNRSELFTRQGHSPNVPFPRVLGIEAVGEIVAAPDGGFSEGDTVATAMGGMGRHFDGGYAEYTLVPAGQVQKLTTALPWSILGALPEMVQTAWGSLHTALGAKSGETLLIRGGTTSVGLTAAILAKQAGLSVLATSRREDRREMLLMNGADEVFIDGGQIAPAVREAHPEGINRVLELVGTTTLLDSFQCAAMGGSVCMTGMVGNAWELDHFSPMGAIPTAVNLTTYAGGAEDFATTPLQQVVDAVEAGSFTPPIGKTFSIDKIVEAHRTMETNTAGGKIVVTT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQ86</accession>
    <name>A0A0M7AQ86_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Energy-coupling factor transporter transmembrane protein BioN</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">bioN</name>
        <name evidence="7" type="ORF">LAX5112_04791</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the CbiQ family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000031">
        <property type="protein sequence ID" value="CTQ77069.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673955.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000031.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04791"/>
    <dbReference type="EnsemblBacteria" id="CTQ77069">
        <property type="protein sequence ID" value="CTQ77069"/>
        <property type="gene ID" value="LAX5112_04791"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003339">
        <property type="entry name" value="ABC/ECF_trnsptr_transmembrane"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02361">
        <property type="entry name" value="CbiQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="36"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="64"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="88"/>
            <end position="105"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008564"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ77069.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="203" mass="22113" checksum="B225321FBBBF3311" modified="2015-12-09" version="1">MMSVYLSGDSWAHRLPAGIKLVAVAIGSLLLFKTEMLWIFLVCLALVLAAYGSLGRGAIQRLRLLKGLSIFLAAILALHWLSGTVMDGVIAILRLCVMVLAASFVSMTTRMDDMMTAVMPMFRPLEWAGFSARKPALGVTLVLRFAPHLMEIFAVLREAYQARTGQKSSWRLIAPFALQALKMSDNVAEALAARGGSEGLTQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQF3</accession>
    <name>A0A0M7AQF3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Decaheme c-type cytochrome, DmsE family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_04658</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000028">
        <property type="protein sequence ID" value="CTQ76646.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04658"/>
    <dbReference type="EnsemblBacteria" id="CTQ76646">
        <property type="protein sequence ID" value="CTQ76646"/>
        <property type="gene ID" value="LAX5112_04658"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023155">
        <property type="entry name" value="Cyt_c-552/4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036280">
        <property type="entry name" value="Multihaem_cyt_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010177">
        <property type="entry name" value="Paired_CXXCH_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13435">
        <property type="entry name" value="Cytochrome_C554"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09699">
        <property type="entry name" value="Paired_CXXCH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="SSF48371"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="SSF48452"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48695">
        <property type="entry name" value="SSF48695"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809650" evidence="1">
        <location>
            <begin position="35"/>
            <end position="659"/>
        </location>
    </feature>
    <feature type="domain" description="Cytochrome_C554" evidence="3">
        <location>
            <begin position="45"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="domain" description="Cytochrome_C554" evidence="3">
        <location>
            <begin position="175"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="domain" description="Paired_CXXCH_1" evidence="2">
        <location>
            <begin position="319"/>
            <end position="346"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF09699"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF13435"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ76646.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="659" mass="73195" checksum="3F9C1DFA42AABD3A" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQI8</accession>
    <name>A0A0M7AQI8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Helix-turn-helix</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04381</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75844.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008189822.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000023.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04381"/>
    <dbReference type="EnsemblBacteria" id="CTQ75844">
        <property type="protein sequence ID" value="CTQ75844"/>
        <property type="gene ID" value="LAX5112_04381"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13443">
        <property type="entry name" value="HTH_26"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00530">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="1">
        <location>
            <begin position="14"/>
            <end position="70"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75844.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="281" mass="31422" checksum="0FAA8229D6EAC819" modified="2015-12-09" version="1">MDKRDRAELFRERLSAALRERELNRSDLARAAELDRSTVSQLLSEESPRLPNGQALAAIASALGVSADWLLGLSTHKGAAADILDQAVQMAETERHPVDVHLLAWYRDAVGAKIRHVPANLPDVLKTEAVLAHEYAGETFRTPGQAITGTRDQQALLNRAESDMEICVSKEALEAFARGEGMWSDLPDAARQEQLMVMGETLDRFYPSLRLHLFGANDRFSAPFTVFGQKWAALYLGQRYLTFSNTRHVQLFSRHFDDLVRHALVRSHEASDFATKLSRGI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQM5</accession>
    <name>A0A0M7AQM5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Phage prohead protease, HK97 family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04396</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75884.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673612.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000023.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04396"/>
    <dbReference type="EnsemblBacteria" id="CTQ75884">
        <property type="protein sequence ID" value="CTQ75884"/>
        <property type="gene ID" value="LAX5112_04396"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008233">
        <property type="term" value="F:peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006433">
        <property type="entry name" value="Prohead_protease"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04586">
        <property type="entry name" value="Peptidase_S78"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01543">
        <property type="entry name" value="proheadase_HK97"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0645">Protease</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-1188">Viral release from host cell</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022612"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75884.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="162" mass="17501" checksum="FCE948DDD67D552F" modified="2015-12-09" version="1">MAGTTGAPVRIAGYASVFGKADGAGDTVLPGAFRRSLRQRPPARVALLWQHDPARPLGRWTRLMETKHGLWAEGELAPGVVAAFEASSLIRAGALSGLSIGFKARTARRPHRGSGRILQDIDLWEISLVTFPQVDEARVRLLTPLSNSPTSRTPHIGSREYA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQN8</accession>
    <name>A0A0M7AQN8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Putative transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">LAX5112_04914</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ner transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000034">
        <property type="protein sequence ID" value="CTQ77448.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674057.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000034.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04914"/>
    <dbReference type="EnsemblBacteria" id="CTQ77448">
        <property type="protein sequence ID" value="CTQ77448"/>
        <property type="gene ID" value="LAX5112_04914"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038722">
        <property type="entry name" value="Ner_HTH_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13693">
        <property type="entry name" value="HTH_35"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH_35" evidence="5">
        <location>
            <begin position="12"/>
            <end position="84"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF13693"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ77448.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="103" mass="11646" checksum="285CB099F8E71591" modified="2015-12-09" version="1">MAQPKQVPKGGWDPFSIKAELHRQHMTMAKLAEANGKDPKSMSHVWKRPLAWAEEAIADFLETPKEKLFPGRYPKTTARILDSKYATYAARPKRPASVDREAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARA1</accession>
    <name>A0A0M7ARA1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04907</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000034">
        <property type="protein sequence ID" value="CTQ77429.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674050.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000034.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04907"/>
    <dbReference type="EnsemblBacteria" id="CTQ77429">
        <property type="protein sequence ID" value="CTQ77429"/>
        <property type="gene ID" value="LAX5112_04907"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026988">
        <property type="entry name" value="YaaC-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14175">
        <property type="entry name" value="YaaC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ77429.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="348" mass="39797" checksum="93925BCE0854B146" modified="2015-12-09" version="1">MDQEAWETLSIYESRDCIKDWYRVRHKRTLNATQAASINNSIAQARAYFEAATATPQSVKPLILYYGVTSLSRALVLMMDPRKSEEHLVGGHGLETVEWRQLLAQGPRKILDLPVRATSGLFHELMMATANRQTCWVIVANPDAPMRFKVNIDTPKFMDGQYAITLNDLVSRDHRFQKIYRLTTKRKPDVAPGQLSSGKNYVELMVEGDPFEPEVDVTDDDFKSNYGLEGLVGPVERRKEDRIFLPIEKMYARYSGNPFTIQQSVLPLVQKTDERRFVVLSAFNEGDRFSDLSRTFMISYFLGMLVRYFPSTWMALLRNENGDQAHPLIKAATKAVEHDFAKQACEVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARC7</accession>
    <name>A0A0M7ARC7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Lysine/ornithine decarboxylase</fullName>
            <ecNumber evidence="5">4.1.1.17</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ldc_2</name>
        <name evidence="5" type="ORF">LAX5112_05009</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the Orn/Lys/Arg decarboxylase class-II family.</text>
    </comment>
    <dbReference type="EC" id="4.1.1.17" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000040">
        <property type="protein sequence ID" value="CTQ77678.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674134.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000040.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_05009"/>
    <dbReference type="EnsemblBacteria" id="CTQ77678">
        <property type="protein sequence ID" value="CTQ77678"/>
        <property type="gene ID" value="LAX5112_05009"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004586">
        <property type="term" value="F:ornithine decarboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006596">
        <property type="term" value="P:polyamine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.37.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009006">
        <property type="entry name" value="Ala_racemase/Decarboxylase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022643">
        <property type="entry name" value="De-COase2_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022644">
        <property type="entry name" value="De-COase2_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022653">
        <property type="entry name" value="De-COase2_pyr-phos_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000183">
        <property type="entry name" value="Orn/DAP/Arg_de-COase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002433">
        <property type="entry name" value="Orn_de-COase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029066">
        <property type="entry name" value="PLP-binding_barrel"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11482">
        <property type="entry name" value="PTHR11482"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02784">
        <property type="entry name" value="Orn_Arg_deC_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00278">
        <property type="entry name" value="Orn_DAP_Arg_deC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01179">
        <property type="entry name" value="ODADCRBXLASE"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01182">
        <property type="entry name" value="ORNDCRBXLASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50621">
        <property type="entry name" value="SSF50621"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51419">
        <property type="entry name" value="SSF51419"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00878">
        <property type="entry name" value="ODR_DC_2_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0456">Lyase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Orn_Arg_deC_N" evidence="4">
        <location>
            <begin position="26"/>
            <end position="258"/>
        </location>
    </feature>
    <feature type="domain" description="Orn_DAP_Arg_deC" evidence="3">
        <location>
            <begin position="259"/>
            <end position="354"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU003737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00278"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF02784"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ77678.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="376" mass="41186" checksum="72FBA81104F87F2E" modified="2015-12-09" version="1">MSERIREFLRRRDEDGPCVVVDLDIVRDNFDAFARSLPDTSVYYAVKANPAPEILNLLESLGSSFDCASVGEIEMVLATGADASRISYGNTIKKERDIARAFEFGVRLFAVDCVEEVEKIARVAPGSRVFCRVLCDGIGAEWPLSRKFGCDPQMAPDVLDHAHRLGLEAYGVSFHVGSQQANLQAWDFALAMAAGVFREMALRGIELKMVNMGGGFPTRYLKDVPGVPRYGEAIFQALSKHFGNRLPSTIIEPGRGMVGNAGLIETEVVLISKKSETDEVRWVYLDIGKFHGLAETMDEAIRYPIKTPRDGDRTAPCVLAGPTCDSVDVLYEKTPYELPVSLSIGDKVLIEACGAYTTTYSSVGFNGFAPLASYVI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARS0</accession>
    <name>A0A0M7ARS0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="10">sn-glycerol-3-phosphate import ATP-binding protein UgpC</fullName>
            <ecNumber evidence="10">3.6.3.20</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">ugpC_4</name>
        <name evidence="10" type="ORF">LAX5112_04614</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Peripheral membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.20" evidence="10"/>
    <dbReference type="EMBL" id="CXWD01000027">
        <property type="protein sequence ID" value="CTQ76503.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673801.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000027.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04614"/>
    <dbReference type="EnsemblBacteria" id="CTQ76503">
        <property type="protein sequence ID" value="CTQ76503"/>
        <property type="gene ID" value="LAX5112_04614"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008643">
        <property type="term" value="P:carbohydrate transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03301">
        <property type="entry name" value="ABC_MalK_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015855">
        <property type="entry name" value="ABC_transpr_MalK-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008995">
        <property type="entry name" value="Mo/tungstate-bd_C_term_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040582">
        <property type="entry name" value="OB_MalK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17912">
        <property type="entry name" value="OB_MalK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50331">
        <property type="entry name" value="SSF50331"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 8 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="10" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-0472">Membrane</keyword>
    <keyword evidence="5 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ABC transporter" evidence="9">
        <location>
            <begin position="4"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="36"/>
            <end position="43"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ76503.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="361" mass="39747" checksum="F55A1CD4FE45A901" modified="2015-12-09" version="1">MPQIRLQNLIKRYGHVEVLHGIDLDMAENEFTVLVGPSGCGKSTTLRMIAGLETVSDGEIFFGDQPVSQLEPKDRGLAMVFQDYALYPHMDVAHNISFALRLQKRPKEEIKSRVKEVAEIVGLTDYLQRKPGALSGGQRQRVAMARALAKDSEIFLFDEPLSNLDAKLRGQMRAELAIMRQRVQKNMIYVTHDQIEAMTLADRIVVMSDGRIQQQGSPEELFKHPANKFVAGFLGSPPMNFLDSELIELDGTFYATGEGFRIAIPAEKTHALGQSDNAVTLGIRPSDLSYAPDAPPGLGLDLEVIVSEYVGAQSVLLCVCGQANVTVELKSETPIALGETLRFAVRPEGIHLFDRKTGTAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AS95</accession>
    <name>A0A0M7AS95_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Inner membrane protein YibH</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">yibH_2</name>
        <name evidence="4" type="ORF">LAX5112_04938</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000036">
        <property type="protein sequence ID" value="CTQ77527.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674081.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000036.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04938"/>
    <dbReference type="EnsemblBacteria" id="CTQ77527">
        <property type="protein sequence ID" value="CTQ77527"/>
        <property type="gene ID" value="LAX5112_04938"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032317">
        <property type="entry name" value="HlyD_D23"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16576">
        <property type="entry name" value="HlyD_D23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="29"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="domain" description="HlyD_D23" evidence="3">
        <location>
            <begin position="62"/>
            <end position="302"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="130"/>
            <end position="157"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF16576"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ77527.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="384" mass="41599" checksum="5BD9FA6AFE7325A3" modified="2015-12-09" version="1">MIVFLTLCYCGVLFCLTKAGVIRLTPFWKASPVLWLVLLLVVLFIPMQWGAPSGPIRSYTSVIEIVPNVSGQVTDVPVQPLMLVEEGTVLFKIDPEPFEAAVSRSRAALAEAKQAVPQLEASFRAAAASVSEAVANRDRAKDEFDRLRTANENATALGRQSTPFSESDVEQLRLTYLASEASLTRAEATAEQARLAFTSEIDGQNTTVARIEADLRRAEFDLRETVVRAPADGYVLALTLRPGQRVSNLPLRSWMAFAPVATGRVVASIPQTRVRFIEPNQPAEVTFAYLPGKVFTAQVESLVRITAAGQLPPNGILPSLSPHHGPNETMGVVLQIDDSGGGFAEMPGGIGGTAAIYTQTAGATHLIRKVMIRMDAWLNYVRPN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZMA0</accession>
    <name>A0A0M6ZMA0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">General L-amino acid-binding periplasmic protein AapJ</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">aapJ_2</name>
        <name evidence="6" type="ORF">LAX5112_00104</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the bacterial solute-binding protein 3 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63888.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040450611.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00104"/>
    <dbReference type="EnsemblBacteria" id="CTQ63888">
        <property type="protein sequence ID" value="CTQ63888"/>
        <property type="gene ID" value="LAX5112_00104"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018313">
        <property type="entry name" value="SBP_3_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00062">
        <property type="entry name" value="PBPb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01039">
        <property type="entry name" value="SBP_BACTERIAL_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005808827" evidence="4">
        <location>
            <begin position="24"/>
            <end position="338"/>
        </location>
    </feature>
    <feature type="domain" description="PBPb" evidence="5">
        <location>
            <begin position="34"/>
            <end position="263"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010333"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU003744"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM00062"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ63888.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="338" mass="35927" checksum="9DE63BBA9EA854EF" modified="2015-12-09" version="1">MSNKILPLVLGAAMGVAATAAGATTLEDVKGKGFIQCGVSQGLPGFSNPDAQGNWTGLDVDLCRAMAAAVFGDASAVKFTPLSAKERFTALQSGEVDVLSRNTTWTMSRDTQLGLNFAGVNYYDGQGFMVRKDLGVTSALEMSGASVCTNTGTTTELNVADYFRANNMPYEIVAFEKADEVVAAYDAGRCDVYTTDASGLYAQRLKLTNPGDHMVLPEIISKEPLGPVVRQGDDEWFNIAKWTLNAMINAEELGVTSANVDEMKASDNPSVKRLLGAEGAFGEAIGLSNDWAYNIVKNVGNYEESFNANVGPDTPLGISRGVNALWSNGGFLYAPPVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZNG0</accession>
    <name>A0A0M6ZNG0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Phosphate transporter</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">cysP</name>
        <name evidence="7" type="ORF">LAX5112_00053</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 6">Membrane</location>
            <topology evidence="1 6">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the inorganic phosphate transporter (PiT) (TC 2.A.20) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63752.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670111.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00053"/>
    <dbReference type="EnsemblBacteria" id="CTQ63752">
        <property type="protein sequence ID" value="CTQ63752"/>
        <property type="gene ID" value="LAX5112_00053"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005315">
        <property type="term" value="F:inorganic phosphate transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006817">
        <property type="term" value="P:phosphate ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001204">
        <property type="entry name" value="Phos_transporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11101">
        <property type="entry name" value="PTHR11101"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01384">
        <property type="entry name" value="PHO4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0592">Phosphate transport</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2 6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="33"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="62"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="96"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="144"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="171"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="197"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="233"/>
            <end position="254"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="260"/>
            <end position="283"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="304"/>
            <end position="322"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="358"/>
            <end position="377"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="397"/>
            <end position="416"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="422"/>
            <end position="438"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="472"/>
            <end position="497"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU363058"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ63752.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="504" mass="52893" checksum="00BB8C09D2E9B633" modified="2015-12-09" version="1">MRSGQDLTPKALDKDLDRVGFLGDAAEAMGRRLIAPGLAICFLAVCAILASLQFAASDVSSVLILVTGATVGGYLAITIGANDVANNVGPAVGARVVSITTALIIAAICESAGALLAGGDVVNTISTEIIAPDDIPENFRFMKAMLTAMAAAAIWINIATLVGAPVSTTHTIIGGVVGAGVAASSFAAINWSTLGVIAATWVASPFLGGIVAALLLAFINAKVIYTDDKLSAARFWLPILLGGLAATFTAYMTHKGLHRLIILPFIPATLAPIVVGAVVWAIYRRVVASQALFLDNRTQSLRSLFAIPLICSAALLSFAHGANDVANAIGPLAAIVNSQSDEINDLHYWILGQLNPVVPLWVSAVGAFGISAGLLLFGRRLVTVVGKRITKLNPIRAFCVTLATSGTVLTASGLGLPVSSTHIAVGAIFGVGLFREWYRNRFVPQKVNGKRHQPIRNREERRRRLLVRRTNLVTIIGAWIVTVPACALLSAGLFHVFDYLLGAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZNQ7</accession>
    <name>A0A0M6ZNQ7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA</fullName>
            <ecNumber evidence="3">3.1.4.17</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">cpdA_1</name>
        <name evidence="3" type="ORF">LAX5112_00095</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the cyclic nucleotide phosphodiesterase class-III family.</text>
    </comment>
    <dbReference type="EC" id="3.1.4.17" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63862.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670134.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00095"/>
    <dbReference type="EnsemblBacteria" id="CTQ63862">
        <property type="protein sequence ID" value="CTQ63862"/>
        <property type="gene ID" value="LAX5112_00095"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004115">
        <property type="term" value="F:3',5'-cyclic-AMP phosphodiesterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd07402">
        <property type="entry name" value="MPP_GpdQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.750.180">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.21.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004843">
        <property type="entry name" value="Calcineurin-like_PHP_ApaH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026575">
        <property type="entry name" value="GpdQ/CpdA-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042281">
        <property type="entry name" value="GpdQ_beta-strand"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042283">
        <property type="entry name" value="GpdQ_catalytic"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029052">
        <property type="entry name" value="Metallo-depent_PP-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00149">
        <property type="entry name" value="Metallophos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56300">
        <property type="entry name" value="SSF56300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Metallophos" evidence="2">
        <location>
            <begin position="4"/>
            <end position="199"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00025742"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00149"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ63862.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="278" mass="30291" checksum="EB8693B78F820016" modified="2015-12-09" version="1">MALIAHITDLHLRPRGLACYRVSDTNMLAERAILALNGLTPRPDAVVLTGDLTDKSDPREYALARQILSRLAMPVFMIPGNHDGSADMRREMSGFPGMDGDVDGKLCYTAEIGDVRLIALDTNIPGKPNGELGTPQLNWLSDRLSDDNRPTLIALHHPPALSGIQHMDAIGLNDANALAEVIGPHKHIQRLLCGHLHRPIIAEFAGKIMTLAPSTGHQVVLDLTEDGPPMFNFEPPAYFLHHHTPQAGTVTHMAYVEAYPGPHHFFADEGVSWPGDDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPN7</accession>
    <name>A0A0M6ZPN7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Sulfoacetaldehyde acetyltransferase</fullName>
            <ecNumber evidence="6">2.3.3.15</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">xsc_1</name>
        <name evidence="6" type="ORF">LAX5112_00374</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the TPP enzyme family.</text>
    </comment>
    <dbReference type="EC" id="2.3.3.15" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64708.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670355.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00374"/>
    <dbReference type="EnsemblBacteria" id="CTQ64708">
        <property type="protein sequence ID" value="CTQ64708"/>
        <property type="gene ID" value="LAX5112_00374"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050487">
        <property type="term" value="F:sulfoacetaldehyde acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030976">
        <property type="term" value="F:thiamine pyrophosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044281">
        <property type="term" value="P:small molecule metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029035">
        <property type="entry name" value="DHS-like_NAD/FAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029061">
        <property type="entry name" value="THDP-binding"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012000">
        <property type="entry name" value="Thiamin_PyroP_enz_cen_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012001">
        <property type="entry name" value="Thiamin_PyroP_enz_TPP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000399">
        <property type="entry name" value="TPP-bd_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045229">
        <property type="entry name" value="TPP_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011766">
        <property type="entry name" value="TPP_enzyme-bd_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18968">
        <property type="entry name" value="PTHR18968"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02775">
        <property type="entry name" value="TPP_enzyme_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00205">
        <property type="entry name" value="TPP_enzyme_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02776">
        <property type="entry name" value="TPP_enzyme_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52467">
        <property type="entry name" value="SSF52467"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52518">
        <property type="entry name" value="SSF52518"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00187">
        <property type="entry name" value="TPP_ENZYMES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0786">Thiamine pyrophosphate</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="TPP_enzyme_N" evidence="5">
        <location>
            <begin position="6"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="domain" description="TPP_enzyme_M" evidence="3">
        <location>
            <begin position="191"/>
            <end position="319"/>
        </location>
    </feature>
    <feature type="domain" description="TPP_enzyme_C" evidence="4">
        <location>
            <begin position="391"/>
            <end position="527"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007812"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU362132"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00205"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF02775"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF02776"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ64708.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="540" mass="58142" checksum="EBCD7380166E121C" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPW4</accession>
    <name>A0A0M6ZPW4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Anthranilate phosphoribosyltransferase</fullName>
            <ecNumber evidence="4">2.4.2.18</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4 7" type="primary">trpD</name>
        <name evidence="7" type="ORF">LAX5112_00199</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Catalyzes the transfer of the phosphoribosyl group of 5-phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>diphosphate + N-(5-phospho-beta-D-ribosyl)anthranilate = 5-phospho-alpha-D-ribose 1-diphosphate + anthranilate</text>
            <dbReference type="Rhea" id="RHEA:11768"/>
            <dbReference type="ChEBI" id="CHEBI:16567"/>
            <dbReference type="ChEBI" id="CHEBI:18277"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:58017"/>
            <dbReference type="EC" id="2.4.2.18"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="4">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="4">Binds 2 magnesium ions per monomer.</text>
    </comment>
    <comment type="pathway">
        <text evidence="4">Amino-acid biosynthesis; L-tryptophan biosynthesis; L-tryptophan from chorismate: step 2/5.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the anthranilate phosphoribosyltransferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.4.2.18" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64160.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670200.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00199"/>
    <dbReference type="EnsemblBacteria" id="CTQ64160">
        <property type="protein sequence ID" value="CTQ64160"/>
        <property type="gene ID" value="LAX5112_00199"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00035">
        <property type="reaction ID" value="UER00041"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004048">
        <property type="term" value="F:anthranilate phosphoribosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000162">
        <property type="term" value="P:tryptophan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1030.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00211">
        <property type="entry name" value="TrpD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005940">
        <property type="entry name" value="Anthranilate_Pribosyl_Tfrase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000312">
        <property type="entry name" value="Glycosyl_Trfase_fam3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017459">
        <property type="entry name" value="Glycosyl_Trfase_fam3_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036320">
        <property type="entry name" value="Glycosyl_Trfase_fam3_N_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035902">
        <property type="entry name" value="Nuc_phospho_transferase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43285">
        <property type="entry name" value="PTHR43285"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02885">
        <property type="entry name" value="Glycos_trans_3N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00591">
        <property type="entry name" value="Glycos_transf_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47648">
        <property type="entry name" value="SSF47648"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52418">
        <property type="entry name" value="SSF52418"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01245">
        <property type="entry name" value="trpD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="4" id="KW-0057">Aromatic amino acid biosynthesis</keyword>
    <keyword evidence="1 4 7" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="4" id="KW-0460">Magnesium</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4 7" id="KW-0808">Transferase</keyword>
    <keyword evidence="3 4" id="KW-0822">Tryptophan biosynthesis</keyword>
    <feature type="domain" description="Glycos_trans_3N" evidence="6">
        <location>
            <begin position="5"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="domain" description="Glycos_transf_3" evidence="5">
        <location>
            <begin position="75"/>
            <end position="324"/>
        </location>
    </feature>
    <feature type="region of interest" description="Phosphoribosylpyrophosphate binding" evidence="4">
        <location>
            <begin position="84"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="region of interest" description="Phosphoribosylpyrophosphate binding" evidence="4">
        <location>
            <begin position="91"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="region of interest" description="Phosphoribosylpyrophosphate binding" evidence="4">
        <location>
            <begin position="109"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="81"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="89"/>
        </location>
        <ligand>
            <name>5-phospho-alpha-D-ribose 1-diphosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58017"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="93"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="112"/>
        </location>
        <ligand>
            <name>anthranilate</name>
            <dbReference type="ChEBI" id="CHEBI:16567"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="121"/>
        </location>
        <ligand>
            <name>5-phospho-alpha-D-ribose 1-diphosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58017"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="167"/>
        </location>
        <ligand>
            <name>anthranilate</name>
            <dbReference type="ChEBI" id="CHEBI:16567"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="226"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="227"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022822"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00591"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF02885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ64160.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="337" mass="34894" checksum="1161A812D9D143B6" modified="2015-12-09" version="1">MQSFKDYISKVADGHSLTFEEARNAFDIILSGSATPSQLGGFLMALRVRGETVAEVTGAVATMREKMLPVDAPADAIDIVGTGGDNSGSYNISTCTALVVAGCGVPVAKHGNRSLSSKSGASEALVELGVDIDVTPDVISDCISKAGIGFMFAPLHHAAMKNVGPTRMELGTRTIFNLLGPLSCPARVKRQMTGVFDRKWAEPVAQALKELGTEKAWIVHGSDGMDEITTTGPTFISELSGGEIRSFEVAPADAGLPEAKLADLKGGTPAQNAKALREVLAGAKNAYRDVVLFNAAASLIVADKVSDLKEGVAMAAQSIDSGSAASTLNELVAVSNG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRH1</accession>
    <name>A0A0M6ZRH1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">YtoQ family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00589</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65328.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ65328">
        <property type="protein sequence ID" value="CTQ65328"/>
        <property type="gene ID" value="LAX5112_00589"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019884">
        <property type="entry name" value="YtoQ_family_protein"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11071">
        <property type="entry name" value="Nuc_deoxyri_tr3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03646">
        <property type="entry name" value="YtoQ_fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ65328.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="178" mass="19487" checksum="4DB8133C4A13AD31" modified="2015-12-09" version="1">MTPANRFSSFWPTVAAHCPHPSTQKGKIMSEWRVFLSGEIHTDWREQIVSATKAAGLPVSFSAPVTNHEASDDCGAAILGGEDQKFWYDHKGAKVNAIRTRTLIEKADIVVVRFGDKYKQWNAAFDAGYASALGKSLIVLHDPSLTHPLKEVDAAALAVAETPDQVVRILKYAIEGEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRQ3</accession>
    <name>A0A0M6ZRQ3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Inner membrane protein YbaN</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ybaN</name>
        <name evidence="2" type="ORF">LAX5112_00216</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64204.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00216"/>
    <dbReference type="EnsemblBacteria" id="CTQ64204">
        <property type="protein sequence ID" value="CTQ64204"/>
        <property type="gene ID" value="LAX5112_00216"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007401">
        <property type="entry name" value="DUF454"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35813">
        <property type="entry name" value="PTHR35813"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04304">
        <property type="entry name" value="DUF454"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF016789">
        <property type="entry name" value="DUF454"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="73"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="96"/>
            <end position="114"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64204.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="130" mass="13906" checksum="DC4C11BC599D3D81" modified="2015-12-09" version="1">MHRTTFMILGLACVAVGIVGAFLPILPSTIFFILAAACFARSSPRLEKKILDHPVFGPPVISWREHGAIPLNAKLYAIAGMCFGYALFYWGTAPQLWLAAVVAVGMIGCAIYVVSRPSGPTPKDQGADPM</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRR9</accession>
    <name>A0A0M6ZRR9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Putative metal-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00632</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65455.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670587.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ65455">
        <property type="protein sequence ID" value="CTQ65455"/>
        <property type="gene ID" value="LAX5112_00632"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012863">
        <property type="entry name" value="DUF1636"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07845">
        <property type="entry name" value="DUF1636"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ65455.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="131" mass="14348" checksum="EAB7154C1BAA174D" modified="2015-12-09" version="1">MNHRITVCISCRRKGTETRLGFELIERLRNALLAAEEMIPETFDVSGVACMAGCDRPCTVAYHSTSKASYLFGDIDPKTDVDDLIAFAKQYAYLGDGWCSSVDRPGKLRKSTLARIPAAGSALEEQKARAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRS1</accession>
    <name>A0A0M6ZRS1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Protein-L-isoaspartate O-methyltransferase</fullName>
            <ecNumber evidence="2">2.1.1.77</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="2">L-isoaspartyl protein carboxyl methyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="2">Protein L-isoaspartyl methyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="2">Protein-beta-aspartate methyltransferase</fullName>
            <shortName evidence="2">PIMT</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3" type="primary">pcm_3</name>
        <name evidence="2" type="synonym">pcm</name>
        <name evidence="3" type="ORF">LAX5112_00223</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>[protein]-L-isoaspartate + S-adenosyl-L-methionine = [protein]-L-isoaspartate alpha-methyl ester + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:12705"/>
            <dbReference type="Rhea" id="RHEA-COMP:12143"/>
            <dbReference type="Rhea" id="RHEA-COMP:12144"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:90596"/>
            <dbReference type="ChEBI" id="CHEBI:90598"/>
            <dbReference type="EC" id="2.1.1.77"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the methyltransferase superfamily. L-isoaspartyl/D-aspartyl protein methyltransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.77" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64224.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00223"/>
    <dbReference type="EnsemblBacteria" id="CTQ64224">
        <property type="protein sequence ID" value="CTQ64224"/>
        <property type="gene ID" value="LAX5112_00223"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004719">
        <property type="term" value="F:protein-L-isoaspartate (D-aspartate) O-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030091">
        <property type="term" value="P:protein repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00090">
        <property type="entry name" value="PIMT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000682">
        <property type="entry name" value="PCMT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11579">
        <property type="entry name" value="PTHR11579"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00080">
        <property type="entry name" value="pimt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01279">
        <property type="entry name" value="PCMT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2 3" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="2 3" id="KW-0808">Transferase</keyword>
    <feature type="active site" evidence="2">
        <location>
            <position position="52"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005369"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ64224.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="208" mass="22261" checksum="2F7753B4909943AF" modified="2015-12-09" version="1">MVDRQIRARGISDAAVLAAMSKVPRHLFVLSESRHHAYEDRPLPIGCGQTISQPYIVALMCEALKIEPGSRVLDIGTGSGYAAAVMAEMGAKVIGIERKSELADRAKANLVRAGYPTVRVHCGDGTLGYPQEAPFDAIMVAAGSPALPGPLKDQLAIGGRLVIPAGPTRRQQQLLRVTRLSETEYSSEPLCDVTFVPLIGEEGWKDAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSJ5</accession>
    <name>A0A0M6ZSJ5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Acetate kinase</fullName>
            <ecNumber evidence="6">2.7.2.1</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Acetokinase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8" type="primary">ackA_2</name>
        <name evidence="6" type="synonym">ackA</name>
        <name evidence="8" type="ORF">LAX5112_00734</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>acetate + ATP = acetyl phosphate + ADP</text>
            <dbReference type="Rhea" id="RHEA:11352"/>
            <dbReference type="ChEBI" id="CHEBI:22191"/>
            <dbReference type="ChEBI" id="CHEBI:30089"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.2.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <cofactor evidence="6">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
        <text evidence="6">Mg(2+). Can also accept Mn(2+).</text>
    </comment>
    <comment type="pathway">
        <text evidence="6">Metabolic intermediate biosynthesis; acetyl-CoA biosynthesis; acetyl-CoA from acetate: step 1/2.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 6 7">Belongs to the acetokinase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.2.1" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65725.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670666.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00734"/>
    <dbReference type="EnsemblBacteria" id="CTQ65725">
        <property type="protein sequence ID" value="CTQ65725"/>
        <property type="gene ID" value="LAX5112_00734"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00340">
        <property type="reaction ID" value="UER00458"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008776">
        <property type="term" value="F:acetate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006085">
        <property type="term" value="P:acetyl-CoA biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006082">
        <property type="term" value="P:organic acid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00020">
        <property type="entry name" value="Acetate_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004372">
        <property type="entry name" value="Ac/propionate_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000890">
        <property type="entry name" value="Aliphatic_acid_kin_short-chain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023865">
        <property type="entry name" value="Aliphatic_acid_kinase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21060">
        <property type="entry name" value="PTHR21060"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00871">
        <property type="entry name" value="Acetate_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000722">
        <property type="entry name" value="Acetate_prop_kin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00471">
        <property type="entry name" value="ACETATEKNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="SSF53067"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00016">
        <property type="entry name" value="ackA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01075">
        <property type="entry name" value="ACETATE_KINASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01076">
        <property type="entry name" value="ACETATE_KINASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 6 7" id="KW-0418">Kinase</keyword>
    <keyword evidence="6" id="KW-0460">Magnesium</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6 7" id="KW-0808">Transferase</keyword>
    <feature type="active site" description="Proton donor/acceptor" evidence="6">
        <location>
            <position position="143"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="8"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="15"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="86"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="201"/>
            <end position="205"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="273"/>
            <end position="275"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="318"/>
            <end position="322"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="369"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="site" description="Transition state stabilizer" evidence="6">
        <location>
            <position position="174"/>
        </location>
    </feature>
    <feature type="site" description="Transition state stabilizer" evidence="6">
        <location>
            <position position="234"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008748"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00020"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003835"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ65725.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="382" mass="40240" checksum="4BB2B241775F7C59" modified="2015-12-09" version="1">MGGILVLNSGSSSIKFALFDESLDETLSGSATEIGGASDLKISSKDLVTKEASADLPDHAAALRAILNTVQTEGVDIANLAGAGHRVVHGGSVLQAAIRVDGQVIAEIERCSDLAPLHNPHNLAAIMALRDLAPDLVQVACFDTAFHASNPEVARRYALPDRPEMETLRRYGFHGISYQGLIKKLADVSESGVPNRLLAFHLGNGASLCAIKSGQSVATTMGYSPLEGLTMGTRTGNIDGNLVLRLAEENGIEDTKELLNKKSGLLGLGGLSDMRALHAAETDASRFAVEHFCYWAVRHAGSMIAAMGGLDGIAFTGGIGENDAVVRQKIISGLRFLGATCDPQSNDSNRSRIDVSGSTVPIWIAKAEEEKTIAAETQKLIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSK2</accession>
    <name>A0A0M6ZSK2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Polysaccharide biosynthesis protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">LAX5112_00721</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65688.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670656.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00721"/>
    <dbReference type="EnsemblBacteria" id="CTQ65688">
        <property type="protein sequence ID" value="CTQ65688"/>
        <property type="gene ID" value="LAX5112_00721"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029303">
        <property type="entry name" value="Polysacc_synt_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002797">
        <property type="entry name" value="Polysacc_synth"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01943">
        <property type="entry name" value="Polysacc_synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14667">
        <property type="entry name" value="Polysacc_synt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="56"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="95"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="132"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="161"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="186"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="309"/>
            <end position="335"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="341"/>
            <end position="362"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="374"/>
            <end position="393"/>
        </location>
    </feature>
    <feature type="domain" description="Polysacc_synt_C" evidence="7">
        <location>
            <begin position="345"/>
            <end position="434"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF14667"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ65688.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="448" mass="47888" checksum="45C984EF90022272" modified="2015-12-09" version="1">MKNLFASLASFALRSETRGVIVSMMVKAASILSAFALFTLSARVLGEEQFGQFALFFSAASMAAVAAAFGQEMLIIRIWNENVATGRISVAKGGIVFGLLISALGATLGAIVMAGMVYFYSNWAAALSSGLFVAAAVFLLFFSSLARSIVSILVGDGQRELTALLFANVVLIFCLVFDWSSSVTSVVNLIVLGKVVAIALQVFFLTRVLRRMYPEIFTAKPEFAVDRWLPSSTRLWFASILESSNQYLDVILVGYLLDPIAAGAYFVTTRLANGFASVADAFNMFAMRQFPELYYKADEGGLLRLLQTLAILTALAVVGGLFVVGVAGHWLLMIFGSEYMAYYHVLVILCLGSAAMAATGPAAPVLMLTGHEGAYLRIVALSVFIRVAGFFLIVPMFGIVGAAATTTVSLVAMALLVSIRSRTATGYNVTATRILGGLAPDRMNAKES</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTA1</accession>
    <name>A0A0M6ZTA1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">L-arabinose transport system permease protein AraQ</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">araQ_1</name>
        <name evidence="7" type="ORF">LAX5112_00627</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65446.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670582.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00627"/>
    <dbReference type="EnsemblBacteria" id="CTQ65446">
        <property type="protein sequence ID" value="CTQ65446"/>
        <property type="gene ID" value="LAX5112_00627"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="20"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="83"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="111"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="149"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="189"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="245"/>
            <end position="266"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="77"/>
            <end position="268"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ65446.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="282" mass="31696" checksum="E2B404ACADE5DC8D" modified="2015-12-09" version="1">MFPTPIERTSRSWQITYQTLLPLALILWLLPLIAVAIFSVKPDADFANANYWGWPSSFEGFTNYGLVFTGSDMPQYLLNSFKITIPTVIGAVALSCMTGFALGIYKFRANIWIFFMFVAGNFVPFQILMVPVRDLTLQLGLYNTITGLVLFHIAFQTGFCTLFMRNFIRALPFELIEAARVEGVAEWRIFWFVVLPLMKPAIAALSVLIFTFIWNDYFWAIVLTQGVESQPVTAGITSFNAQYRAAYHLMSAGSIVAALPPVAMFFMMQKHFIAGLTLGAVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTQ8</accession>
    <name>A0A0M6ZTQ8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">NAD-reducing hydrogenase HoxS subunit delta</fullName>
            <ecNumber evidence="8">1.12.1.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">hoxY</name>
        <name evidence="8" type="ORF">LAX5112_00893</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.12.1.2" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66165.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670783.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00893"/>
    <dbReference type="EnsemblBacteria" id="CTQ66165">
        <property type="protein sequence ID" value="CTQ66165"/>
        <property type="gene ID" value="LAX5112_00893"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047985">
        <property type="term" value="F:hydrogen dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.700">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006137">
        <property type="entry name" value="NADH_UbQ_OxRdtase-like_20kDa"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037024">
        <property type="entry name" value="NiFe_Hase_small_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01058">
        <property type="entry name" value="Oxidored_q6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="1" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8" id="KW-0371">Homeobox</keyword>
    <keyword evidence="5" id="KW-0408">Iron</keyword>
    <keyword evidence="2" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="6" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4 8" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Oxidored_q6" evidence="7">
        <location>
            <begin position="22"/>
            <end position="178"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF01058"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ66165.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="194" mass="21765" checksum="2CB6F780147145CB" modified="2015-12-09" version="1">MSERSQAELPKARIATASLAGCFGCHMAILDIDERLMDLMKLVEVDRSPLTDKKRFTQRCDIGIIEGGCCNEENVHVLQDFRRNCDVLIALGQCAIMGGLPAMRNAIMHSDEPLRECLDEAYITGRYIRNTTHNVPNDPALPLLLDEVYPCAQVVEIDYQIPGCAPEGDIIFDTLSKLLTGKFRGFEREMIKFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUH3</accession>
    <name>A0A0M6ZUH3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DUF2059 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_00963</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66425.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00963"/>
    <dbReference type="EnsemblBacteria" id="CTQ66425">
        <property type="protein sequence ID" value="CTQ66425"/>
        <property type="gene ID" value="LAX5112_00963"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018637">
        <property type="entry name" value="DUF2059"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09832">
        <property type="entry name" value="DUF2059"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809287" description="DUF2059 domain-containing protein" evidence="1">
        <location>
            <begin position="26"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="domain" description="DUF2059" evidence="2">
        <location>
            <begin position="95"/>
            <end position="148"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF09832"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ66425.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="170" mass="18756" checksum="436FC988236F175F" modified="2015-12-09" version="1">MKSVKFAGVGLAMLAWGVISGGAVAQDNFSESHLEAAKAVALETKVLEPFDAILFVMAEQTLSAFTQNDPTRAEEIAEIVEQVALELAPRRAVLNERIFRIWAIAFTEEELIQLAEFYRTPLGMKLRDSVADITAASVEASRDWQDRLSVDIVSMVQEELDKRSAAVTNQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVR0</accession>
    <name>A0A0M6ZVR0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Type III effector pipB2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">pipB2_1</name>
        <name evidence="3" type="ORF">LAX5112_01123</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66869.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670980.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01123"/>
    <dbReference type="EnsemblBacteria" id="CTQ66869">
        <property type="protein sequence ID" value="CTQ66869"/>
        <property type="gene ID" value="LAX5112_01123"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001646">
        <property type="entry name" value="5peptide_repeat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018683">
        <property type="entry name" value="DUF2169"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09937">
        <property type="entry name" value="DUF2169"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00805">
        <property type="entry name" value="Pentapeptide"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF2169" evidence="2">
        <location>
            <begin position="25"/>
            <end position="300"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="695"/>
            <end position="722"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF09937"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ66869.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="1071" mass="115927" checksum="8F5F383655C58F2A" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWB9</accession>
    <name>A0A0M6ZWB9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Metallophos domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01191</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67048.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01191"/>
    <dbReference type="EnsemblBacteria" id="CTQ67048">
        <property type="protein sequence ID" value="CTQ67048"/>
        <property type="gene ID" value="LAX5112_01191"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.21.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004843">
        <property type="entry name" value="Calcineurin-like_PHP_ApaH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029052">
        <property type="entry name" value="Metallo-depent_PP-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00149">
        <property type="entry name" value="Metallophos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56300">
        <property type="entry name" value="SSF56300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Metallophos" evidence="1">
        <location>
            <begin position="68"/>
            <end position="178"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00149"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67048.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="439" mass="47843" checksum="1C354B66E6D8A130" modified="2015-12-09" version="1">MAVQTGRAARSHPMLPPVFDDAGELAALPRNLERWPVHEDHSGGNAGAVRDSLIAAASHGTWTWPEKPVVFISDPHADADGFLRSLVSAGAVRRLNDGFVLTPFGRMAKIIVGGDCLDKGPSNLDMLNALKCLFDLGADVRLLAGNHDLRLRLAIRALTLPKAPLTEHLFVRMGRKILPLLAEINTRYVTPEDLACLPDEAECRERIFPSSSWKATFPAAAGPYLTPLGIEKELKKLKKKAKQFAKQADAEGLTMREVYAASLRCRDLFLSPDGAYSWFYSAMDVVEQIGSIVFLHAGIDDTMCALLAKDGPAAVNTRYRLEAEDDPFAFYSGPVANLVRTKYRPVDGQLTASGVALLHQAGIKMIVQGHVNNHKGQRILAKNGLLHLEGDITLDRTSRRLEGLTGIGAGATLIFPSGDVVGLSSDYPRVKHFKPEHHL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWI3</accession>
    <name>A0A0M6ZWI3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 8 10">Integration host factor subunit alpha</fullName>
            <shortName evidence="8">IHF-alpha</shortName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8 11" type="primary">ihfA</name>
        <name evidence="8" type="synonym">himA</name>
        <name evidence="11" type="ORF">LAX5112_01025</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8 10">This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control.</text>
    </comment>
    <comment type="subunit">
        <text evidence="8 10">Heterodimer of an alpha and a beta chain.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 8 9">Belongs to the bacterial histone-like protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66596.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451807.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01025"/>
    <dbReference type="EnsemblBacteria" id="CTQ66596">
        <property type="protein sequence ID" value="CTQ66596"/>
        <property type="gene ID" value="LAX5112_01025"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030527">
        <property type="term" value="F:structural constituent of chromatin"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006417">
        <property type="term" value="P:regulation of translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd13835">
        <property type="entry name" value="IHF_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.520.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00380">
        <property type="entry name" value="IHF_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000119">
        <property type="entry name" value="Hist_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020816">
        <property type="entry name" value="Histone-like_DNA-bd_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010992">
        <property type="entry name" value="IHF-like_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005684">
        <property type="entry name" value="IHF_alpha"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33175">
        <property type="entry name" value="PTHR33175"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00216">
        <property type="entry name" value="Bac_DNA_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01727">
        <property type="entry name" value="DNABINDINGHU"/>
    </dbReference>
    <dbReference type="SMART" id="SM00411">
        <property type="entry name" value="BHL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47729">
        <property type="entry name" value="SSF47729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00987">
        <property type="entry name" value="himA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00045">
        <property type="entry name" value="HISTONE_LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 8 10" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="5 8 10" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 8 10" id="KW-0804">Transcription</keyword>
    <keyword evidence="4 8 10" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="3 8 10" id="KW-0810">Translation regulation</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010529"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00018329"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022845"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00380"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU003939"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU004485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ66596.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="101" mass="11100" checksum="81959E35F15603F3" modified="2015-12-09" version="1">MGNRTITRADLCEAVYQKVGLSRTESSELVERVLSEISDCLVTGESVKLSSFGSFVVRSKGERIGRNPKTGEEVPISPRRVMVFKPSNVLKQRINDALTGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXL5</accession>
    <name>A0A0M6ZXL5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Gamma-glutamylputrescine oxidoreductase</fullName>
            <ecNumber evidence="2">1.4.3.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">puuB_1</name>
        <name evidence="2" type="ORF">LAX5112_01416</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.4.3.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67528.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671247.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01416"/>
    <dbReference type="EnsemblBacteria" id="CTQ67528">
        <property type="protein sequence ID" value="CTQ67528"/>
        <property type="gene ID" value="LAX5112_01416"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006076">
        <property type="entry name" value="FAD-dep_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01266">
        <property type="entry name" value="DAO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DAO" evidence="1">
        <location>
            <begin position="37"/>
            <end position="400"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01266"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67528.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="445" mass="48058" checksum="6463936A342E79F7" modified="2015-12-09" version="1">MLRAAKTLPNLQGPAAWNRILPAPIAAQRLDENITADVTIIGAGFAGLSAARRLTQIDPGVKVVVLDALPVAESSAGRNSGFMIDLPHELTSEDYAGAGDDKSLIALNREAIHFAREAVDEYQIDANYFDPAGKVNGAASLKAAAHNESYAQHLASLGEDYELLDPRQMTELTGSRHYLGGLYTPGTVMLQPAGYIRGLAAGLRRTGVSVFEESPVTSFSEQDTGWLIETPGGKVSTGKIILTVNGHLESFGYERNRLMQLFLFAVMTPDLGDDVLLKLGGQPRWGITPSDPMGTTLRRIDTGQGGNRIVTRTCAVLKPDMRLTQAHVDRAAAVMQDKFDRRFPKLAGLKMEYSWAGHLCLSMNGVAVMRELEDGVYSGCVQNGLGTARGTLTGMGAAELTLGIESDITRHFGAEASPNKLPPQPFRELGANVVLRWKEWRAAEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXN0</accession>
    <name>A0A0M6ZXN0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Type VI secretion protein, EvpB/ family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01143</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66922.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670997.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01143"/>
    <dbReference type="EnsemblBacteria" id="CTQ66922">
        <property type="protein sequence ID" value="CTQ66922"/>
        <property type="gene ID" value="LAX5112_01143"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010269">
        <property type="entry name" value="T6SS_TssC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044032">
        <property type="entry name" value="TssC1_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044031">
        <property type="entry name" value="TssC1_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35565">
        <property type="entry name" value="PTHR35565"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05943">
        <property type="entry name" value="VipB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18945">
        <property type="entry name" value="VipB_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03355">
        <property type="entry name" value="VI_chp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="VipB" evidence="1">
        <location>
            <begin position="70"/>
            <end position="368"/>
        </location>
    </feature>
    <feature type="domain" description="VipB_2" evidence="2">
        <location>
            <begin position="382"/>
            <end position="492"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF05943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF18945"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ66922.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="495" mass="55352" checksum="D4A2CC78DB663963" modified="2015-12-09" version="1">MADTENQQQGAGAQTEELDASLLDQILQETKLAPSDDGYDVAKKGVAAFISELLKPTDGQSQVSGAAVDMMITEIDKKLSDQVDQIIHNEDFKTLESAWRSMKFVVDRTDFRQNIKIEMMSVSKDELLEDFEDSPEVVKSGLYKHIYTAEYGQFGGQPVGAVVTNYDFGPGSQDIKLAQYCASVGSMSHAPFIAAAAPAMFGVDTFEEIPNLKDMESIFEGPKYAKWNSFRESEDSRYFALAMPRFMLRTPYGPETTPVKAFNYEEESGSTSENYLWGNAAFAMATKLTDSFAKFRWCPNIIGPQSGGAVEDLPVHTFEAMGQLQSKIPTEVLVSDRKEYELAEQGFISLTMRKGSDNAAFFSANSVQKPKFFGNNPEAKDAELNYKLGTQLPYMMIINRLAHYIKVLQRENIGSWKDRNELQSELNNWIRQYVSDQDNPSADVRSRRPLRKASITVADVEGEPGWYSVSMAVQPHFKYMGADFTLSLKGKLDKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXW1</accession>
    <name>A0A0M6ZXW1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01217</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67111.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671056.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01217"/>
    <dbReference type="EnsemblBacteria" id="CTQ67111">
        <property type="protein sequence ID" value="CTQ67111"/>
        <property type="gene ID" value="LAX5112_01217"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67111.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="211" mass="21817" checksum="8AA52862B3CF669F" modified="2015-12-09" version="1">MSVIAFSKSIGPVEVDCLISEKHTSELEITGNPIESGAEANDHAYVKPKEVVLEIADENASATFQELIRFQEKREPFSLNTGLSTYKNMLVQSVQAKRDARHSKILSATVTLKEVKIVGSSGFGVGGLGGFGGLSGLPSLGGLGSLTGLGNLGNFGGLLDGVPGLGAAPLTPSNVASDIINKASPVVHIGDSMTTVVPEAENLSIAKRIFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXW9</accession>
    <name>A0A0M6ZXW9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01221</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67121.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671060.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67121">
        <property type="protein sequence ID" value="CTQ67121"/>
        <property type="gene ID" value="LAX5112_01221"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021695">
        <property type="entry name" value="Phage_KPP10_Orf10"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11681">
        <property type="entry name" value="DUF3277"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67121.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="146" mass="15529" checksum="A78943E7EDE3D38A" modified="2015-12-09" version="1">MAQTSAYSMINVAATLDGVAVKGLFDGDDAIVVSQGADVGEMMVGADGSSIFSQTADRSATITIKLQHTSPTHRRLIEKWKQQRAGRLVAFPFDLMDSGSGEGGTADKCFVQRAPDDSKGKNAVVREWVIVTGDWTPNVPNENNGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZY48</accession>
    <name>A0A0M6ZY48_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">STAS domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01153</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66950.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671004.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01153"/>
    <dbReference type="EnsemblBacteria" id="CTQ66950">
        <property type="protein sequence ID" value="CTQ66950"/>
        <property type="gene ID" value="LAX5112_01153"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.750.24">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002645">
        <property type="entry name" value="STAS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036513">
        <property type="entry name" value="STAS_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52091">
        <property type="entry name" value="SSF52091"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50801">
        <property type="entry name" value="STAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="STAS" evidence="1">
        <location>
            <begin position="23"/>
            <end position="85"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66950.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="112" mass="12711" checksum="31C1CFA8BB62353E" modified="2015-12-09" version="1">MEISTNDYRVWAEGSKIHYEGTMRLSGTEAYAPILELMNNVLDSKPEEIVLDLTGLEFLNSSGINLLAKFTIEIRKQPEIGVRVLGSKAIPWQSKSLRNLQRLHKSLELQIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZY70</accession>
    <name>A0A0M6ZY70_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">L-threonine 3-dehydrogenase</fullName>
            <ecNumber evidence="5">1.1.1.103</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">tdh</name>
        <name evidence="5" type="ORF">LAX5112_00981</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the zinc-containing alcohol dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.103" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66473.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670892.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00981"/>
    <dbReference type="EnsemblBacteria" id="CTQ66473">
        <property type="protein sequence ID" value="CTQ66473"/>
        <property type="gene ID" value="LAX5112_00981"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008743">
        <property type="term" value="F:L-threonine 3-dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013149">
        <property type="entry name" value="ADH-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013154">
        <property type="entry name" value="ADH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002328">
        <property type="entry name" value="ADH_Zn_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011032">
        <property type="entry name" value="GroES-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020843">
        <property type="entry name" value="PKS_ER"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08240">
        <property type="entry name" value="ADH_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00107">
        <property type="entry name" value="ADH_zinc_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00829">
        <property type="entry name" value="PKS_ER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50129">
        <property type="entry name" value="SSF50129"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00059">
        <property type="entry name" value="ADH_ZINC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="1 5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="PKS_ER" evidence="4">
        <location>
            <begin position="16"/>
            <end position="342"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="94"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="94"/>
            <end position="111"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU361277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ66473.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="345" mass="37677" checksum="7C808997EB678096" modified="2015-12-09" version="1">MSNQMKALEKSEPREGLWMTRAPVPEIGPDDVLIKINKTGICGTDIHIWNWDDWASKTVPVPMITGHEFAGEIVEVGRNVDDLEVGQRCSGEGHLIGKHSRQSRSGKFHLDPETRGIGVNEQGAFAEYLRLPAFNVVPLPDEIDDEIGAILDPLGNAVHTALSFDLVGEDVLITGAGPIGIMAAAVARHVGARNVVITDVNQARLDLATRVVDVVPVNVAREDLKGIEQKLGMKEGFDVGLEMSGNQIALDQMVENLVMGGRIALLGIPPGKSPVDWSRIVFKAITIKGVYGREIFETWYKMIAMLQNGLDVRNVITHRFSVDDFEKGFAAMKSGEAGKVVLNWQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYA1</accession>
    <name>A0A0M6ZYA1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">D-inositol 3-phosphate glycosyltransferase</fullName>
            <ecNumber evidence="2">2.4.1.250</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">mshA_2</name>
        <name evidence="2" type="ORF">LAX5112_01316</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.4.1.250" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67297.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671138.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01316"/>
    <dbReference type="EnsemblBacteria" id="CTQ67297">
        <property type="protein sequence ID" value="CTQ67297"/>
        <property type="gene ID" value="LAX5112_01316"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102710">
        <property type="term" value="F:D-inositol-3-phosphate glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001296">
        <property type="entry name" value="Glyco_trans_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00534">
        <property type="entry name" value="Glycos_transf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glycos_transf_1" evidence="1">
        <location>
            <begin position="225"/>
            <end position="381"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00534"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67297.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="406" mass="45367" checksum="93595F4BB11B54CD" modified="2015-12-09" version="1">MSRIAVVMKGYPRLSETFIAQEILGLERRGIDFLIVALRQPYDPYIHDLHRQISAEVMYLPEYVKDDPARVARAKKWAEAQPTYEAAKALFDADFARESNANRQRRWAQGCVFAHELPEDITWIHTHYLHTPCSASRYAAHLSGRRWSFSAHAKDIWTSPEWDLRTKLDDAEWGVTCTGVNAKYLKSLCSNPDKVELVYHGLDFCCFPMPSEEPSTRDGSGAPVQLISVGRAVEKKGYNDLLTALSKLPEDLNWHFTHIGGGALSEKLKERADRLGLSDKITWRGAQPREQVISSCQKADLFVLPSKLTKSGDRDGIPNVLVEAQSMGICCLSTSVSAIPELITDGETGRLVPPADPKTLAKALEDLIKNPGDRDRLGKASAENVRTNFATEPGLDHLAEKFRKLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYR9</accession>
    <name>A0A0M6ZYR9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Adenylate cyclase 1</fullName>
            <ecNumber evidence="2">4.6.1.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">cyaA_8</name>
        <name evidence="2" type="ORF">LAX5112_01585</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="4.6.1.1" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67958.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01585"/>
    <dbReference type="EnsemblBacteria" id="CTQ67958">
        <property type="protein sequence ID" value="CTQ67958"/>
        <property type="gene ID" value="LAX5112_01585"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004016">
        <property type="term" value="F:adenylate cyclase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009190">
        <property type="term" value="P:cyclic nucleotide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035556">
        <property type="term" value="P:intracellular signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07302">
        <property type="entry name" value="CHD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.170.150.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1230">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001054">
        <property type="entry name" value="A/G_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007361">
        <property type="entry name" value="DUF427"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038694">
        <property type="entry name" value="DUF427_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00211">
        <property type="entry name" value="Guanylate_cyc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04248">
        <property type="entry name" value="NTP_transf_9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00044">
        <property type="entry name" value="CYCc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50125">
        <property type="entry name" value="GUANYLATE_CYCLASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Guanylate cyclase" evidence="1">
        <location>
            <begin position="348"/>
            <end position="476"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67958.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="529" mass="57337" checksum="53AED4F40FDEBD4B" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYV0</accession>
    <name>A0A0M6ZYV0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01535</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67829.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671334.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67829">
        <property type="protein sequence ID" value="CTQ67829"/>
        <property type="gene ID" value="LAX5112_01535"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021529">
        <property type="entry name" value="DUF2798"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11391">
        <property type="entry name" value="DUF2798"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="44"/>
            <end position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67829.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="73" mass="8303" checksum="1E4B783C5DF3D75F" modified="2015-12-09" version="1">MRHRVISTALMSFLLSFLMSCWVTLINLGWSDAFLGQWMSAFRLAWPAAAAIAFCFGPFVQNATTYITQRIPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYY6</accession>
    <name>A0A0M6ZYY6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01385</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67426.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671188.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01385"/>
    <dbReference type="EnsemblBacteria" id="CTQ67426">
        <property type="protein sequence ID" value="CTQ67426"/>
        <property type="gene ID" value="LAX5112_01385"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021791">
        <property type="entry name" value="Phage_TAC_11"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11836">
        <property type="entry name" value="Phage_TAC_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67426.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="115" mass="11992" checksum="54B1460F98BCC27B" modified="2015-12-09" version="1">MPNRFRGEISAQLDGRTWTLVLTLGALAELEAAYECKSLATLLQRFSPDSLSASDMIVLLGAGLRGAGHDVTNDQVAMMQAAGGVAGFAAITADLLTAAFGVTFTEDDELLAEVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZ15</accession>
    <name>A0A0M6ZZ15_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Ribonuclease Z</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01312</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67290.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671136.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01312"/>
    <dbReference type="EnsemblBacteria" id="CTQ67290">
        <property type="protein sequence ID" value="CTQ67290"/>
        <property type="gene ID" value="LAX5112_01312"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.15.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001279">
        <property type="entry name" value="Metallo-B-lactamas"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036866">
        <property type="entry name" value="RibonucZ/Hydroxyglut_hydro"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12706">
        <property type="entry name" value="Lactamase_B_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56281">
        <property type="entry name" value="SSF56281"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lactamase_B" evidence="1">
        <location>
            <begin position="42"/>
            <end position="240"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12706"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67290.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="274" mass="30061" checksum="957B9064DDE5EFE0" modified="2015-12-09" version="1">MAENFSLRCWGVRGSTPTPGQKTLRYGGETSCFELRAGDALVLIDCGSGARNLGMDLCSAGTRSFDLLFTHTHLDHICGLPFFKPAYDPNFSVTAWAGHFQDDTCLMDIVSRIMSPPIFPVAAKTLKAVEFKTFRAGDVLPRRDELVIRTIRLNHPGGACGYRFDFKGKSICIITDHEHGDPDVDAALPAFVEGADVMIYDAMYTDAEYEKFKGWGHSTWQKAVELAKTANVKTPVLFHHDPTRSDEALDEIGLAAKAVHPGTLVARQGMILAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZ31</accession>
    <name>A0A0M6ZZ31_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Amidohydrolase EgtC</fullName>
            <ecNumber evidence="2">3.5.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">egtC</name>
        <name evidence="2" type="ORF">LAX5112_01091</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.5.1.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66783.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670959.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01091"/>
    <dbReference type="EnsemblBacteria" id="CTQ66783">
        <property type="protein sequence ID" value="CTQ66783"/>
        <property type="gene ID" value="LAX5112_01091"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026869">
        <property type="entry name" value="EgtC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017932">
        <property type="entry name" value="GATase_2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029055">
        <property type="entry name" value="Ntn_hydrolases_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13230">
        <property type="entry name" value="GATase_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56235">
        <property type="entry name" value="SSF56235"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51278">
        <property type="entry name" value="GATASE_TYPE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glutamine amidotransferase type-2" evidence="1">
        <location>
            <begin position="2"/>
            <end position="262"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51278"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66783.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="262" mass="29418" checksum="7D0B0384CB83CA84" modified="2015-12-09" version="1">MCRWAAWSGAPKYLEEVICDPHHSLIDQSRNATSCKTAVNADGFGVAWYGDMETACLYKDVRPAWSDPNLLQIAKHIRSGHFLAHVRASTGTATTRDNCHPFTFDRWTFMHNGQIGGYDKVRRRLDNMIPDDLYRDRMGGTDSESLFLIALAYGLKHHPRAAMARAVHEAEALSKYSGCTPHMRFASAWSDGETLYAARYASDCFPPTLYYREFNDGVMVVSEPLDEARNCWMEVPHGHMITVTGGKVAQCAFLSDEELLTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZ77</accession>
    <name>A0A0M6ZZ77_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Putative permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">LAX5112_01415</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the UPF0718 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67526.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671442.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67526">
        <property type="protein sequence ID" value="CTQ67526"/>
        <property type="gene ID" value="LAX5112_01415"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005524">
        <property type="entry name" value="DUF318"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03773">
        <property type="entry name" value="ArsP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="15"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="39"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="85"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="132"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="214"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="245"/>
            <end position="269"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="289"/>
            <end position="311"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="318"/>
            <end position="339"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006386"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ67526.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="340" mass="35274" checksum="2E91F2863254122A" modified="2015-12-09" version="1">MADQSAASVQRPTRLHFAGGGFLLLAVMSWLWPRFAWNGVVFTIEGLIAVAPLVVPGILLTAWIMASGADKIISRAFEGHMARAVLAAAAIGAITPVCGVTVLPLMVGLLAAGVPLAPVMAFWLSSPVTDPAMLATTAATLGLAFAIGKTVAAFGLGLFGGTVTAFLTAGQSGQSALRDNGLASSLATRSCCGLATFSSAIWRDANRREAFYRQVFVTTRLILICLIPAFFAEFALNQALTPGSLAVYVGADIWWAIPAAVFVGAPAYIDGYAALPLTRGLVDNGMSPGAAMAFLVSGGVVSIWGALAIFPVLKLRPFLLYLALAITGSLLAGYAFGWVY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZM9</accession>
    <name>A0A0M6ZZM9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Multiple resistance and pH homeostasis protein D</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">mrpD_2</name>
        <name evidence="4" type="ORF">LAX5112_01519</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67787.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671322.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01519"/>
    <dbReference type="EnsemblBacteria" id="CTQ67787">
        <property type="protein sequence ID" value="CTQ67787"/>
        <property type="gene ID" value="LAX5112_01519"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008137">
        <property type="term" value="F:NADH dehydrogenase (ubiquinone) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042773">
        <property type="term" value="P:ATP synthesis coupled electron transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003918">
        <property type="entry name" value="NADH_UbQ_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001750">
        <property type="entry name" value="ND/Mrp_mem"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00361">
        <property type="entry name" value="Proton_antipo_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01437">
        <property type="entry name" value="NUOXDRDTASE4"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="26"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="55"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="95"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="130"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="155"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="185"/>
            <end position="210"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="230"/>
            <end position="254"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="263"/>
            <end position="289"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="295"/>
            <end position="317"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="324"/>
            <end position="346"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="352"/>
            <end position="372"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="392"/>
            <end position="411"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="431"/>
            <end position="452"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="473"/>
            <end position="506"/>
        </location>
    </feature>
    <feature type="domain" description="Proton_antipo_M" evidence="3">
        <location>
            <begin position="151"/>
            <end position="442"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU000320"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00361"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ67787.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="536" mass="56208" checksum="D80756F57890289E" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZN1</accession>
    <name>A0A0M6ZZN1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 9">Serine acetyltransferase</fullName>
            <ecNumber evidence="4 9">2.3.1.30</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">cysE_2</name>
        <name evidence="11" type="ORF">LAX5112_01460</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 9">
            <text>acetyl-CoA + L-serine = CoA + O-acetyl-L-serine</text>
            <dbReference type="Rhea" id="RHEA:24560"/>
            <dbReference type="ChEBI" id="CHEBI:33384"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57288"/>
            <dbReference type="ChEBI" id="CHEBI:58340"/>
            <dbReference type="EC" id="2.3.1.30"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Amino-acid biosynthesis; L-cysteine biosynthesis; L-cysteine from L-serine: step 1/2.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 9">Belongs to the transferase hexapeptide repeat family.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.30" evidence="4 9"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67632.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671280.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01460"/>
    <dbReference type="EnsemblBacteria" id="CTQ67632">
        <property type="protein sequence ID" value="CTQ67632"/>
        <property type="gene ID" value="LAX5112_01460"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00136">
        <property type="reaction ID" value="UER00199"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009001">
        <property type="term" value="F:serine O-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006535">
        <property type="term" value="P:cysteine biosynthetic process from serine"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03354">
        <property type="entry name" value="LbH_SAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3130.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001451">
        <property type="entry name" value="Hexapep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018357">
        <property type="entry name" value="Hexapep_transf_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045304">
        <property type="entry name" value="LbH_SAT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010493">
        <property type="entry name" value="Ser_AcTrfase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042122">
        <property type="entry name" value="Ser_AcTrfase_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005881">
        <property type="entry name" value="Ser_O-AcTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011004">
        <property type="entry name" value="Trimer_LpxA-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00132">
        <property type="entry name" value="Hexapep"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06426">
        <property type="entry name" value="SATase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000441">
        <property type="entry name" value="CysE"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00971">
        <property type="entry name" value="SATase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51161">
        <property type="entry name" value="SSF51161"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01172">
        <property type="entry name" value="cysE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00101">
        <property type="entry name" value="HEXAPEP_TRANSFERASES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 9 11" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0677">Repeat</keyword>
    <keyword evidence="6 9 11" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="SATase_N" evidence="10">
        <location>
            <begin position="19"/>
            <end position="123"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004876"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00013266"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00018522"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRNR" id="PIRNR000441"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="SMART" id="SM00971"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ67632.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="272" mass="29644" checksum="42F4C9EE7AC1C273" modified="2015-12-09" version="1">MSTPVRQPGEDRVMKHDPVWQQLRDEAQAMVAAEPALSSFVYETVLNHDSLEEAVVHRLGDRLGRDIVSASLIRQTYLEALADEPELAEIFRVDIVAVFDRDPACFRYLEPVLYFKGFHGLQTHRLANWLWRRGRKDFALYLQSRCSEVFQIDIHPAVPVGRGIFIDHGTGIVVGGTAVIEDDVSILQGVTLGGTGKEDGDRHPKIRHGVLLGAGANVLGNLEIGHCSRIASGSVVLTDVPANTTVAGVPAKIVGKAGCPEPARSMNQLLGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZW3</accession>
    <name>A0A0M6ZZW3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Antiholin-like protein LrgA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">lrgA</name>
        <name evidence="7" type="ORF">LAX5112_01491</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67712.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671302.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67712">
        <property type="protein sequence ID" value="CTQ67712"/>
        <property type="gene ID" value="LAX5112_01491"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005538">
        <property type="entry name" value="LrgA/CidA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33931">
        <property type="entry name" value="PTHR33931"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03788">
        <property type="entry name" value="LrgA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="27"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="58"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="84"/>
            <end position="108"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ67712.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="120" mass="12216" checksum="02DFB6860C5CF9C0" modified="2015-12-09" version="1">MLFYLTVILACQLIGELITVASGLPIPGPVIGMVLLLAGLLIKGGIPDELATVGDAFLTNLSLLFVPAGVGVMLHIALIGEEGLAITLALIGSTLATIAVTAVVMHLLSRSADAADREAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A003</accession>
    <name>A0A0M7A003_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Peptidoglycan glycosyltransferase</fullName>
            <ecNumber evidence="4">2.4.1.129</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="primary">pbpD</name>
        <name evidence="14" type="ORF">LAX5112_01502</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>[GlcNAc-(1-&gt;4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)](n)-di-trans,octa-cis-undecaprenyl diphosphate + beta-D-GlcNAc-(1-&gt;4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)-di-trans,octa-cis-undecaprenyl diphosphate = [GlcNAc-(1-&gt;4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)](n+1)-di-trans-octa-cis-undecaprenyl diphosphate + di-trans,octa-cis-undecaprenyl diphosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:23708"/>
            <dbReference type="Rhea" id="RHEA-COMP:9602"/>
            <dbReference type="Rhea" id="RHEA-COMP:9603"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:58405"/>
            <dbReference type="ChEBI" id="CHEBI:60033"/>
            <dbReference type="ChEBI" id="CHEBI:78435"/>
            <dbReference type="EC" id="2.4.1.129"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1">Cell wall biogenesis; peptidoglycan biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">In the C-terminal section; belongs to the transpeptidase family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">In the N-terminal section; belongs to the glycosyltransferase 51 family.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.129" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67742.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01502"/>
    <dbReference type="EnsemblBacteria" id="CTQ67742">
        <property type="protein sequence ID" value="CTQ67742"/>
        <property type="gene ID" value="LAX5112_01502"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00219"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004180">
        <property type="term" value="F:carboxypeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008658">
        <property type="term" value="F:penicillin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008955">
        <property type="term" value="F:peptidoglycan glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3810.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.710.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012338">
        <property type="entry name" value="Beta-lactam/transpept-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001264">
        <property type="entry name" value="Glyco_trans_51"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023346">
        <property type="entry name" value="Lysozyme-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036950">
        <property type="entry name" value="PBP_transglycosylase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001460">
        <property type="entry name" value="PCN-bd_Tpept"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00912">
        <property type="entry name" value="Transgly"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00905">
        <property type="entry name" value="Transpeptidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53955">
        <property type="entry name" value="SSF53955"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56601">
        <property type="entry name" value="SSF56601"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0121">Carboxypeptidase</keyword>
    <keyword evidence="7" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="9" id="KW-0511">Multifunctional enzyme</keyword>
    <keyword evidence="6" id="KW-0645">Protease</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Transgly" evidence="13">
        <location>
            <begin position="97"/>
            <end position="259"/>
        </location>
    </feature>
    <feature type="domain" description="Transpeptidase" evidence="12">
        <location>
            <begin position="353"/>
            <end position="586"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="679"/>
            <end position="699"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004752"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007739"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022645"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023268"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023988"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF00905"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF00912"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="CTQ67742.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="699" mass="77184" checksum="F50D01FEBCC55B9F" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0D9</accession>
    <name>A0A0M7A0D9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Glyceraldehyde-3-phosphate dehydrogenase</fullName>
            <ecNumber evidence="4">1.2.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">gap_1</name>
        <name evidence="6" type="ORF">LAX5112_01577</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.2.1.-" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67936.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671363.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01577"/>
    <dbReference type="EnsemblBacteria" id="CTQ67936">
        <property type="protein sequence ID" value="CTQ67936"/>
        <property type="gene ID" value="LAX5112_01577"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050661">
        <property type="term" value="F:NADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016620">
        <property type="term" value="F:oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006006">
        <property type="term" value="P:glucose metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020831">
        <property type="entry name" value="GlycerAld/Erythrose_P_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020830">
        <property type="entry name" value="GlycerAld_3-P_DH_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020829">
        <property type="entry name" value="GlycerAld_3-P_DH_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020828">
        <property type="entry name" value="GlycerAld_3-P_DH_NAD(P)-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006424">
        <property type="entry name" value="Glyceraldehyde-3-P_DH_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02800">
        <property type="entry name" value="Gp_dh_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00044">
        <property type="entry name" value="Gp_dh_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00078">
        <property type="entry name" value="G3PDHDRGNASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM00846">
        <property type="entry name" value="Gp_dh_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01534">
        <property type="entry name" value="GAPDH-I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00071">
        <property type="entry name" value="GAPDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 4 6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Gp_dh_N" evidence="5">
        <location>
            <begin position="127"/>
            <end position="288"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007406"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU000397"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU361160"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM00846"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ67936.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="477" mass="52173" checksum="6B3A2A77F5D013B4" modified="2015-12-09" version="1">MAAMDNHFDNWKEQQSAAEQMIPLVGHLYRDYGINIRIFGRRLLNNSAIEIIKAHRYALQITGQELDVAKSLEIVKAMLEMDLAASRVDLGKLCHRFMETGGDAKTLVEEQLASINTGKTSILQEPQDVVLYGFGRIGRLLARMMIERVGAGNKMRLRAIVVRGGKEGDLKKRSSLLRRDSVHGAFSGSITVDEDKNAIIANGNYIQVIYANSPAEVDYTKYGIKNALIVDNTGMWRDEDGLGQHLKCPGAAKVILTAPGKGNIKNVVYGVNQGDITPDDDILSAASCTTNAITPVLKVINDEFGIENGHVETIHAFTNDQNLIDNYHKGDRRGRAAPLNMVLTSTGAASAVAKCLPEMKGKLTGNAVRVPIPNVSMAILNLNLKRETSAEEMNDYLRQVSIQSPLQDQIDYTASTELVSSDLVGSIHAGVVDSQATIVDGDRLVLYVWYDNEAGYSTQVIRLMQEVAGMKYPSVPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0K2</accession>
    <name>A0A0M7A0K2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01768</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68515.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671497.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01768"/>
    <dbReference type="EnsemblBacteria" id="CTQ68515">
        <property type="protein sequence ID" value="CTQ68515"/>
        <property type="gene ID" value="LAX5112_01768"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025841">
        <property type="entry name" value="CP_ATPgrasp_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016450">
        <property type="entry name" value="UCP005522"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14403">
        <property type="entry name" value="CP_ATPgrasp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005522">
        <property type="entry name" value="UCP005522"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ68515.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="474" mass="52753" checksum="5872AD5D8BDA3FC9" modified="2015-12-09" version="1">MSDSSGFFNEMLDKDGSPRAPYSRIANWLQDKPNSFLTKKSRDAETIFRRLGITFAVYGAEEATERLIPFDPIPRIISASEWRRLSAGIDQRVRALNAFLHDIYHRQEIIRAGRIPANLILQNEAFLPEMAGFTPARKVYSHIIGTDLVRVSENEFYVLEDNTRTPSGVSYMMENRETMMRLFPELFQTHNVAPVERYPENLRQTLESVAPDPAKSEQTIVVLTPGIYNSAYFEHAFLADSMGVELVEGRDLFVDAGKVFMRTTRAPKQVDVIYRRIDDAFLDPLTFNPGSMLGVPGLFDAYRAGNVTICNAPGTGIADDKAIYAYVPDIIEFYTGQKPILNNVPTWNCSREDDLAYVLDNLADIVVKEVHGSGGYGMLIGPTASKREIAEFRKVLENNPSNYIAQPTLALSACPTHVASGIAPRHVDLRPFVLIGDQVRITPGGLTRVALKKGSLVVNSSQGGGTKDTWVLED</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A161</accession>
    <name>A0A0M7A161_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Putative diguanylate cyclase YedQ</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_01883</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68778.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671581.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01883"/>
    <dbReference type="EnsemblBacteria" id="CTQ68778">
        <property type="protein sequence ID" value="CTQ68778"/>
        <property type="gene ID" value="LAX5112_01883"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000160">
        <property type="entry name" value="GGDEF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00990">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00267">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00254">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50887">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="6"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="41"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="70"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="98"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="122"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="153"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="191"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="domain" description="GGDEF" evidence="3">
        <location>
            <begin position="256"/>
            <end position="388"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="392"/>
            <end position="416"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ68778.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="416" mass="45511" checksum="73856BD4D4322437" modified="2015-12-09" version="1">MNLDVKTLFTVVTLAYLIGAVVMTVLSIAMRSAPKSVRAGWGLWGNCLFLSAAAATMISQRGAIPDALSIIVANALLTIGFGLRPSAIALLNGSKMHYLWLPVAGTLGWLGLYAFEFFRSDILLRVIYINGFCLLGVLLCVRESMRLNLHRVSSWFLTIAFSMDVAVRISLIGTHLQKHYPTLLEAYETLPLQLCFLALITAIVLKLVGITVSIFEMQRHQYREEAEKDPQTGLLNQRGFMRTASRHHEQLAPSSAPYALVLMDIDELKQIEERYGATMRDALQKLFGKIAGSTLPSTAVAGHLPTGQIVVFMPLSDGVEANSYARRISKMLVTESQSASGNKVAARLSAGIFTGTADTDIQRAIEIAGICLRQARQNNHSNIMTHHAATGDPVAATSDETPFARRQKQEVLDPAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1N0</accession>
    <name>A0A0M7A1N0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">DUF2778 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_01761</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68497.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671490.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01761"/>
    <dbReference type="EnsemblBacteria" id="CTQ68497">
        <property type="protein sequence ID" value="CTQ68497"/>
        <property type="gene ID" value="LAX5112_01761"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021225">
        <property type="entry name" value="Tlde1_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10908">
        <property type="entry name" value="DUF2778"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="21"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="domain" description="DUF2778" evidence="3">
        <location>
            <begin position="311"/>
            <end position="414"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="145"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="225"/>
            <end position="255"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="239"/>
            <end position="255"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF10908"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ68497.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="433" mass="45986" checksum="EB1F481C44032878" modified="2015-12-09" version="1">MPKTHQSTPKAHTPVSKRNSFGGHLLTIGSVTILAGALAIKAALPALQGTAENEAAALTPIKATVQVAKAEDTNHAVRIATSIQVSDFPENERASLDANNKANIVPATAQLLPTQDQKAVAKVALAQRLASLNLRYALLASRPAKNDDVYGPSAPAGSNTLTAEATAPAGQAADTAEPETVVAGLVEPAHDTADPSTVDTLPMIDAETASVQVASLSPSNVLPVPAMRPKPLVRTKPGAISKPSSTPNTRQTTHPPIMAYAKPQEPGKDDSPFSGLGKLFNGKGGGLPGRSSKVAVYDISAAVVHMPDGSKLKANSGIGHRMNKPKYAYVKNLGPTPPNVYKLRMRERRFHGVEAIRMLPYDVAAMRGRDGMLAHSPLLRRSKGSHGCVAFTHYDKFLRAFKQGKVKTMIVVPDMSKLPKYMALYNERKYASR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2C5</accession>
    <name>A0A0M7A2C5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Replicative DNA helicase</fullName>
            <ecNumber evidence="2">3.6.4.12</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">dnaB_2</name>
        <name evidence="2" type="ORF">LAX5112_01964</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.6.4.12" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68999.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671645.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01964"/>
    <dbReference type="EnsemblBacteria" id="CTQ68999">
        <property type="protein sequence ID" value="CTQ68999"/>
        <property type="gene ID" value="LAX5112_01964"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003678">
        <property type="term" value="F:DNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007694">
        <property type="entry name" value="DNA_helicase_DnaB-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03796">
        <property type="entry name" value="DnaB_C"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0347">Helicase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SF4 helicase" evidence="1">
        <location>
            <begin position="59"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="domain" description="SF4 helicase" evidence="1">
        <location>
            <begin position="140"/>
            <end position="212"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03796"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68999.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="238" mass="26773" checksum="2F257311A7213C71" modified="2015-12-09" version="1">MDTLSTPIFRLKKRAHQLVRDEGLPLHRALDRVAQHEGFRNWSLLANRYKTDPLHIQVLNQMRPGHTLLVGGRPRQGKTKLGLKLVARAAVADGPVAVFSLDYTEDQIRAEFAHLWESGNQSPRHPIIDVSDQICADHIVARLQQAPGCSLVLIDYLQLLDQSRATPPLDEQLQILNQFAKSSGCKMVFLAQIDRDFENSGRKLPDFGDVRQPNPCDFSRFDLGCFLHGGEVQIVPAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3J1</accession>
    <name>A0A0M7A3J1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02015</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69187.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671710.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ69187">
        <property type="protein sequence ID" value="CTQ69187"/>
        <property type="gene ID" value="LAX5112_02015"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="30"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="141"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="166"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="214"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="311"/>
            <end position="330"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="342"/>
            <end position="358"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="365"/>
            <end position="382"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69187.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="396" mass="44948" checksum="0B036F6B850D50B0" modified="2015-12-09" version="1">MSNPAQRLLEQSFLFCFKKSNALYRPVRQWIGALVLVVFIAMTTAVVHVFPGSNWDMFAYTASVLEPSIDDTAELHRQSYDFVEKNVSPGEYLILTQDRNYRIHQAENPDAFMTMLGFYRLKILYIETARLLTGFMDPVQALRLISKASILAIGGLLLVWMARNQALACGLPVAVLLTLSGFTEAAQLVTPDLYCTVFLLLAAMSYLEKLDWLAAVSLLCAFLVRPDHLAFIGVFFVFAAIYGPGRWWMTGCFAVCFSLYVWLTKGANHPGWWVHMWFSHIEFVPTLEGFNPPFSITAYVQMLVRATVRSLMGETWLAVLIAQVLFFAKLIRVTEMAERTRVLLYAVFASICAKYLVFPHYETRFYVPYLIIMGMILLISWHKQSQSDSLVGAGRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3P9</accession>
    <name>A0A0M7A3P9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Alkylhydroperoxidase AhpD family core domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02020</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69201.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671903.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02020"/>
    <dbReference type="EnsemblBacteria" id="CTQ69201">
        <property type="protein sequence ID" value="CTQ69201"/>
        <property type="gene ID" value="LAX5112_02020"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004601">
        <property type="term" value="F:peroxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051920">
        <property type="term" value="F:peroxiredoxin activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1290.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029032">
        <property type="entry name" value="AhpD-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004675">
        <property type="entry name" value="AhpD_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003779">
        <property type="entry name" value="CMD-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02627">
        <property type="entry name" value="CMD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69118">
        <property type="entry name" value="SSF69118"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00778">
        <property type="entry name" value="ahpD_dom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-0575">Peroxidase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CMD" evidence="1">
        <location>
            <begin position="27"/>
            <end position="97"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02627"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69201.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="144" mass="16141" checksum="A504FDB75C7496FD" modified="2015-12-09" version="1">MTATTAPVNHHQQIPGIAQTLGGVSASFAKEGLDPKLQHLVDLRVSQINQCAFCVKMHIKEALAAGEYSERLERLIVWRHVDDFSEKEKAALAYAEALTYMKSEQSYGPLRAELRKHFTEAEISLLTAAIGMINLWNRVQISNY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A418</accession>
    <name>A0A0M7A418_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Methyl-accepting chemotaxis protein 3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">mcp3</name>
        <name evidence="7" type="ORF">LAX5112_01752</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the methyl-accepting chemotaxis (MCP) protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68473.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ68473">
        <property type="protein sequence ID" value="CTQ68473"/>
        <property type="gene ID" value="LAX5112_01752"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004888">
        <property type="term" value="F:transmembrane signaling receptor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006935">
        <property type="term" value="P:chemotaxis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004090">
        <property type="entry name" value="Chemotax_Me-accpt_rcpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004089">
        <property type="entry name" value="MCPsignal_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00015">
        <property type="entry name" value="MCPsignal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00260">
        <property type="entry name" value="CHEMTRNSDUCR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00283">
        <property type="entry name" value="MA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50111">
        <property type="entry name" value="CHEMOTAXIS_TRANSDUC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0807">Transducer</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="20"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="355"/>
            <end position="373"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="6">
        <location>
            <begin position="375"/>
            <end position="428"/>
        </location>
    </feature>
    <feature type="domain" description="Methyl-accepting transducer" evidence="5">
        <location>
            <begin position="445"/>
            <end position="699"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="475"/>
            <end position="501"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="475"/>
            <end position="499"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00029447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ68473.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="726" mass="76249" checksum="518AE88F852872CC" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A490</accession>
    <name>A0A0M7A490_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase</fullName>
            <ecNumber evidence="3">2.7.6.3</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="11">6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="12">7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="14" type="primary">sulD</name>
        <name evidence="14" type="ORF">LAX5112_02288</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Catalyzes the transfer of pyrophosphate from adenosine triphosphate (ATP) to 6-hydroxymethyl-7,8-dihydropterin, an enzymatic step in folate biosynthesis pathway.</text>
    </comment>
    <comment type="pathway">
        <text evidence="1">Cofactor biosynthesis; tetrahydrofolate biosynthesis; 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine diphosphate from 7,8-dihydroneopterin triphosphate: step 4/4.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the HPPK family.</text>
    </comment>
    <dbReference type="EC" id="2.7.6.3" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69878.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671898.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02288"/>
    <dbReference type="EnsemblBacteria" id="CTQ69878">
        <property type="protein sequence ID" value="CTQ69878"/>
        <property type="gene ID" value="LAX5112_02288"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00077">
        <property type="reaction ID" value="UER00155"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003848">
        <property type="term" value="F:2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046656">
        <property type="term" value="P:folic acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046654">
        <property type="term" value="P:tetrahydrofolate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd00483">
        <property type="entry name" value="HPPK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.560">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000550">
        <property type="entry name" value="Hppk"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035907">
        <property type="entry name" value="Hppk_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01288">
        <property type="entry name" value="HPPK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55083">
        <property type="entry name" value="SSF55083"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01498">
        <property type="entry name" value="folK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00794">
        <property type="entry name" value="HPPK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="9" id="KW-0289">Folate biosynthesis</keyword>
    <keyword evidence="7" id="KW-0418">Kinase</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="HPPK" evidence="13">
        <location>
            <begin position="103"/>
            <end position="114"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005051"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005810"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00013253"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00016218"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022909"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00029409"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00029766"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00033413"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS00794"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="CTQ69878.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="176" mass="18879" checksum="3ECD42BA94FE8439" modified="2015-12-09" version="1">MTLHQTNLAAAESAAPTRCALGLGSNIGDTAAHLKKALDQLDASEGITVVARSSDYSTPPWGPVPQDDYRNICAVVDTILSPQDLLARCLAIETELGRVRDIRWGPRIIDIDVLIYGTRSVNESDLELPHPRMGDRAFVLIPLAEIWPDAPLADGQTAAEALKTCPDQDGVVKLSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4F8</accession>
    <name>A0A0M7A4F8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02296</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ69948.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ69948">
        <property type="protein sequence ID" value="CTQ69948"/>
        <property type="gene ID" value="LAX5112_02296"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="33"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69948.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="34" mass="4003" checksum="79F934F6436430F3" modified="2015-12-09" version="1">MFNSKWAHRGLPILLIWIAAPMPLWIMVILMLII</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4Q0</accession>
    <name>A0A0M7A4Q0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01804</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68604.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671526.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01804"/>
    <dbReference type="EnsemblBacteria" id="CTQ68604">
        <property type="protein sequence ID" value="CTQ68604"/>
        <property type="gene ID" value="LAX5112_01804"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032962">
        <property type="entry name" value="HPA2/HPA3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10545:SF42">
        <property type="entry name" value="PTHR10545:SF42"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="4"/>
            <end position="152"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68604.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="152" mass="17343" checksum="6045408383CC9E50" modified="2015-12-09" version="1">MAAIQIRPIERADKSAWLPLWQAYLAFYQQTLSDEVTDGLFERLLSDGFHDGLVAEQDGKLVGFVHFLEHASTWSLTPTCYLEDLYVDSSQRGGGVGRKLIEAVYAAAEQSGCSNVYWHTHDHNTVARQLYDRVGILSNFVRYEKRKWEDSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4R4</accession>
    <name>A0A0M7A4R4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Ribose 1,5-bisphosphate phosphokinase PhnN</fullName>
            <ecNumber evidence="3">2.7.4.23</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">Ribose 1,5-bisphosphokinase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3 5" type="primary">phnN</name>
        <name evidence="5" type="ORF">LAX5112_02181</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 3">
            <text>alpha-D-ribose 1,5-bisphosphate + ATP = 5-phospho-alpha-D-ribose 1-diphosphate + ADP</text>
            <dbReference type="Rhea" id="RHEA:20109"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:58017"/>
            <dbReference type="ChEBI" id="CHEBI:68688"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.4.23"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 3">Metabolic intermediate biosynthesis; 5-phospho-alpha-D-ribose 1-diphosphate biosynthesis; 5-phospho-alpha-D-ribose 1-diphosphate from D-ribose 5-phosphate (route II): step 3/3.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the ribose 1,5-bisphosphokinase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.4.23" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69607.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02181"/>
    <dbReference type="EnsemblBacteria" id="CTQ69607">
        <property type="protein sequence ID" value="CTQ69607"/>
        <property type="gene ID" value="LAX5112_02181"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00087">
        <property type="reaction ID" value="UER00175"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033863">
        <property type="term" value="F:ribose 1,5-bisphosphate phosphokinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006015">
        <property type="term" value="P:5-phosphoribose 1-diphosphate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019634">
        <property type="term" value="P:organic phosphonate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00836">
        <property type="entry name" value="PhnN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008145">
        <property type="entry name" value="GK/Ca_channel_bsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008144">
        <property type="entry name" value="Guanylate_kin-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012699">
        <property type="entry name" value="PhnN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00072">
        <property type="entry name" value="GuKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02322">
        <property type="entry name" value="phosphon_PhnN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50052">
        <property type="entry name" value="GUANYLATE_KINASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Guanylate kinase-like" evidence="4">
        <location>
            <begin position="29"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="36"/>
            <end position="43"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000373"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005069"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00836"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ69607.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="206" mass="22094" checksum="64EBE01A41BA6795" modified="2015-12-09" version="1">MCRLCAVSGAKAAVLPDARMHAQDKVGPGRMILVVGPSGAGKDTLMAALKDRVKDNDSVVFARRAVTRDADASSEDHDTLSRSDFETLVSAGNVALSWEAHGLGYVVPQSYDRAIRDGKTVIANGSRKVLKEASEKYETAIVLLITAPVEILAERLAARGRETGEDIEARLKRADLEPDNVDNLVRIENTGTPEEGVADMLRALGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5I9</accession>
    <name>A0A0M7A5I9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Arsenate reductase, glutaredoxin family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02477</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70348.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672140.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70348">
        <property type="protein sequence ID" value="CTQ70348"/>
        <property type="gene ID" value="LAX5112_02477"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.15.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001279">
        <property type="entry name" value="Metallo-B-lactamas"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036866">
        <property type="entry name" value="RibonucZ/Hydroxyglut_hydro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006311">
        <property type="entry name" value="TAT_signal"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00753">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00849">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56281">
        <property type="entry name" value="SSF56281"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809244" evidence="1">
        <location>
            <begin position="28"/>
            <end position="292"/>
        </location>
    </feature>
    <feature type="domain" description="Lactamase_B" evidence="2">
        <location>
            <begin position="43"/>
            <end position="230"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ70348.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="292" mass="31094" checksum="6FC5B144E74F801D" modified="2015-12-09" version="1">MQLLDRRTFLALSAATAATTLAKPVLAAIGGANIFTADLWGAAVDSAIIVGEESAVLIDAQLTMPNAARLADVIAATGKTLETICITHVHPDHHLGLVAIVDRFPDAKPVAHPQVQSQLSAAAKWMLRTMSQGTEPGTYADRVIIPEPMTSNTIMLEGERIEVLDPLHGDTDLLSAVHIPALDTLIASDFLYSGTHQWMAENTSPERVSRWRSSLDQLEAIGAGTIVPGHEGPGAVRDPSIFGTTRAYIDQWETALAATSNAEDLKAAMMVGNEDKALEWVLDSSVAAVYPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5T0</accession>
    <name>A0A0M7A5T0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02298</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ69951.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ69951">
        <property type="protein sequence ID" value="CTQ69951"/>
        <property type="gene ID" value="LAX5112_02298"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ69951.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="98" mass="11141" checksum="1242C2FD5317FB8C" modified="2015-12-09" version="1">MFQDALAGQAAELIRYQDAEAADQTAAEIWQSTAEDCVLARMKTIRVYGGLPRHKRRLTQHERVDRLQALLRLWANGCICAVDEELFADLLARRSLRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5Z9</accession>
    <name>A0A0M7A5Z9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_02330</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70037.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671956.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02330"/>
    <dbReference type="EnsemblBacteria" id="CTQ70037">
        <property type="protein sequence ID" value="CTQ70037"/>
        <property type="gene ID" value="LAX5112_02330"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022742">
        <property type="entry name" value="Hydrolase_4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12146">
        <property type="entry name" value="Hydrolase_4"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="30"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="domain" description="Hydrolase_4" evidence="3">
        <location>
            <begin position="96"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="domain" description="Hydrolase_4" evidence="3">
        <location>
            <begin position="221"/>
            <end position="269"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="16"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF12146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ70037.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="294" mass="31804" checksum="CB2A70D7C4042632" modified="2015-12-09" version="1">MTAEDSNNSTPPAQDGTGTVRRVGRTVRKVLVAGAIAYGIVAGYMYLNQRNFVFIPTGELETPGAKGLETVTVETVSMQDGTNVTVWTSEGRENTPTVLYFHGNSSNLSTRHKRFAQVLESGFGLYAPSYRGYPGSEGTPSEAAFIQDALEHFDRASATGRPVILHGESLGTGVATAVAEQRPDAGLLVLEAPYTALVDIASEQYPWLPVSVLMKDPMPTRERIRNVQSPVLIVHGTEDRVIPVAHGERLYEIAPEPKTLKIVEGVSHSGLWGNGLWEAVQDAYCTSNAEMRAC</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6C4</accession>
    <name>A0A0M7A6C4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Ribosomal-protein-alanine acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02014</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69184.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671709.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ69184">
        <property type="protein sequence ID" value="CTQ69184"/>
        <property type="gene ID" value="LAX5112_02014"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004343">
        <property type="term" value="F:glucosamine 6-phosphate N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006048">
        <property type="term" value="P:UDP-N-acetylglucosamine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039143">
        <property type="entry name" value="GNPNAT1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13355">
        <property type="entry name" value="PTHR13355"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13673">
        <property type="entry name" value="Acetyltransf_10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="1"/>
            <end position="138"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69184.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="138" mass="15158" checksum="48403F0A77114804" modified="2015-12-09" version="1">MTFEIKNQVPEPETYLQLRKDCGLGGYELKAAELGLKNSLHAVMVFDGDDPIGMGRLVGDGGLFVQVTDIAVLPAYQGKGLGRMIMESLMSWSEVELPRSAYMSLIADVPANKLYEKFGFHETAPRSVGMARRVGTYP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6E2</accession>
    <name>A0A0M7A6E2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Luminescence regulatory protein LuxO</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">luxO_1</name>
        <name evidence="11" type="ORF">LAX5112_02311</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ69986.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671942.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02311"/>
    <dbReference type="EnsemblBacteria" id="CTQ69986">
        <property type="protein sequence ID" value="CTQ69986"/>
        <property type="gene ID" value="LAX5112_02311"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002197">
        <property type="entry name" value="HTH_Fis"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002078">
        <property type="entry name" value="Sigma_54_int"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025943">
        <property type="entry name" value="Sigma_54_int_dom_ATP-bd_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025944">
        <property type="entry name" value="Sigma_54_int_dom_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02954">
        <property type="entry name" value="HTH_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00158">
        <property type="entry name" value="Sigma54_activat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00676">
        <property type="entry name" value="SIGMA54_INTERACT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00688">
        <property type="entry name" value="SIGMA54_INTERACT_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50045">
        <property type="entry name" value="SIGMA54_INTERACT_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0010">Activator</keyword>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0804">Transcription</keyword>
    <keyword evidence="4" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="3" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="domain" description="Response regulatory" evidence="10">
        <location>
            <begin position="14"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="domain" description="Sigma-54 factor interaction" evidence="9">
        <location>
            <begin position="173"/>
            <end position="402"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="8">
        <location>
            <position position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023159"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50045"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ69986.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="496" mass="54247" checksum="BFDFC607088B3035" modified="2015-12-09" version="1">MGSKEGKTLPVIVRVLDASSSEAARTSAVCARLSAECSEPILYTDTAPCLQDLADKNTDILIIDLETIGGDEALEAYAVRCPKAVILAVSSMGSVSRAVSAMRAGAHDFLTKPFSLDALASKITFQLQQRRPIAKPCQQATDRAIRVEVVNQDNLPTPRNAPEPKQVLGLGRLIGTSPAMLDIHDQVRRMAPSQAPVFITGESGTGKELCAAAVHELSDRNSGRFVTLNCAAIPRDLIESEIFGYVRGAFTGAGDNRAGAAEQADGGTLFLDEIGEMDLLLQSKLLRFLQTGTFQRLGDTASRKVDARIICATNRDPLTEITAGRFREDLYYRLHVLPVHLPALRERREDILPLAEAFLKRYSGEERRNFRGFDADAEARIVSYGWPGNVRQLENTIRQIVVMNDGAAVTHDMLPLVIRDAQSRPNGIIDLSRERSRVAPASRPFGAIEPLWAQERRIIEDALDAFDGNIAMAAAALEISPSTIYRKKQSWSARSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6J8</accession>
    <name>A0A0M7A6J8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Ribosomal RNA small subunit methyltransferase I</fullName>
            <ecNumber evidence="6">2.1.1.198</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">16S rRNA 2'-O-ribose C1402 methyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">rRNA (cytidine-2'-O-)-methyltransferase RsmI</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6 8" type="primary">rsmI</name>
        <name evidence="8" type="ORF">LAX5112_02086</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>cytidine(1402) in 16S rRNA + S-adenosyl-L-methionine = 2'-O-methylcytidine(1402) in 16S rRNA + H(+) + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:42924"/>
            <dbReference type="Rhea" id="RHEA-COMP:10285"/>
            <dbReference type="Rhea" id="RHEA-COMP:10286"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:74495"/>
            <dbReference type="ChEBI" id="CHEBI:82748"/>
            <dbReference type="EC" id="2.1.1.198"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the methyltransferase superfamily. RsmI family.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.198" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69363.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671756.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02086"/>
    <dbReference type="EnsemblBacteria" id="CTQ69363">
        <property type="protein sequence ID" value="CTQ69363"/>
        <property type="gene ID" value="LAX5112_02086"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070677">
        <property type="term" value="F:rRNA (cytosine-2'-O-)-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000453">
        <property type="term" value="P:enzyme-directed rRNA 2'-O-methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd11648">
        <property type="entry name" value="RsmI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.950.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1010.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01877">
        <property type="entry name" value="16SrRNA_methyltr_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000878">
        <property type="entry name" value="4pyrrol_Mease"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035996">
        <property type="entry name" value="4pyrrol_Methylase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014777">
        <property type="entry name" value="4pyrrole_Mease_sub1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014776">
        <property type="entry name" value="4pyrrole_Mease_sub2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008189">
        <property type="entry name" value="rRNA_ssu_MeTfrase_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018063">
        <property type="entry name" value="SAM_MeTrfase_RsmI_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46111">
        <property type="entry name" value="PTHR46111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00590">
        <property type="entry name" value="TP_methylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005917">
        <property type="entry name" value="MTase_YraL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53790">
        <property type="entry name" value="SSF53790"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00096">
        <property type="entry name" value="TIGR00096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01296">
        <property type="entry name" value="RSMI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 6 8" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0698">rRNA processing</keyword>
    <keyword evidence="5 6" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="4 6 8" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="TP_methylase" evidence="7">
        <location>
            <begin position="31"/>
            <end position="230"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01877"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00590"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ69363.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="303" mass="32397" checksum="59428ADDE0ECBE8A" modified="2015-12-09" version="1">MTEPSGEQTGSKNRYSLSEHAFTAPNLEPALYIVSTPIGNLGDITVRALETLAAASMIACEDTRITSTLTQKFGLKTPLLPYHEHNADKQRPKILGELEAGNAVALVSDAGTPLVSDPGYRLVRDVVAAGYKVFPIPGASAPLAGLVASGLPSDTVLFAGFLPQKGGPKTKRLEELAKIPATLIFFESPHRTAATLELMAAVFGETREAVVARELTKRFETFERGTLAELSNRFADQTVKGEIVILVEPPEEKPEADAEDLDTLLREALSDMPVSAAAKQVSKATGLDRSEVYKRALELKAGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6T3</accession>
    <name>A0A0M7A6T3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative PEP-CTERM system TPR-repeat lipoprotein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02631</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70855.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672207.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70855">
        <property type="protein sequence ID" value="CTQ70855"/>
        <property type="gene ID" value="LAX5112_02631"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013105">
        <property type="entry name" value="TPR_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_repeat"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07719">
        <property type="entry name" value="TPR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00028">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="SSF48452"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50005">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0802">TPR repeat</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809115" evidence="2">
        <location>
            <begin position="34"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="repeat" description="TPR" evidence="1">
        <location>
            <begin position="108"/>
            <end position="141"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00339"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ70855.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="192" mass="21576" checksum="09AF51F3B147CB59" modified="2015-12-09" version="1">MQASAILRSRHLLPALALLLCFAFLNASRLAQAGDLPDQRLFDALLSSKSEMEARIVEAEIWESWIAAAPSADLEAKVRSAMSKRRVADYEGALMELNSALETAPDYAEAWNQRAFIHYLQGKPDRSLEDIERVLALEPRHFGALSGKGRILMEQGRVRLAQQALREAVALHPFIPERFLLIREQEEKGIDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7W5</accession>
    <name>A0A0M7A7W5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DNA-binding transcriptional repressor ArsR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02584</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70711.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672171.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70711">
        <property type="protein sequence ID" value="CTQ70711"/>
        <property type="gene ID" value="LAX5112_02584"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001845">
        <property type="entry name" value="HTH_ArsR_DNA-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00778">
        <property type="entry name" value="HTHARSR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00418">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50987">
        <property type="entry name" value="HTH_ARSR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH arsR-type" evidence="1">
        <location>
            <begin position="1"/>
            <end position="95"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50987"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70711.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="111" mass="12185" checksum="180CC630782F3E01" modified="2015-12-09" version="1">MKPDDAILALGALAQEDRLAAFRLLMMEGGQGLPSGTIAERLDVAPTRMSFHLATLEKAGLLNTRREGRHIHYSVDYLRMRSLLGFLIEDCCGNNPAVCCFSVGVPNQETH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A945</accession>
    <name>A0A0M7A945_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Probable transaldolase</fullName>
            <ecNumber evidence="9">2.2.1.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9 10" type="primary">tal</name>
        <name evidence="10" type="ORF">LAX5112_02888</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 9">
            <text>D-glyceraldehyde 3-phosphate + D-sedoheptulose 7-phosphate = beta-D-fructose 6-phosphate + D-erythrose 4-phosphate</text>
            <dbReference type="Rhea" id="RHEA:17053"/>
            <dbReference type="ChEBI" id="CHEBI:16897"/>
            <dbReference type="ChEBI" id="CHEBI:57483"/>
            <dbReference type="ChEBI" id="CHEBI:57634"/>
            <dbReference type="ChEBI" id="CHEBI:59776"/>
            <dbReference type="EC" id="2.2.1.2"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3 9">Carbohydrate degradation; pentose phosphate pathway; D-glyceraldehyde 3-phosphate and beta-D-fructose 6-phosphate from D-ribose 5-phosphate and D-xylulose 5-phosphate (non-oxidative stage): step 2/3.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 9">Belongs to the transaldolase family. Type 3B subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.2.1.2" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71628.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672402.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02888"/>
    <dbReference type="EnsemblBacteria" id="CTQ71628">
        <property type="protein sequence ID" value="CTQ71628"/>
        <property type="gene ID" value="LAX5112_02888"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00115">
        <property type="reaction ID" value="UER00414"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016832">
        <property type="term" value="F:aldehyde-lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004801">
        <property type="term" value="F:transaldolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006098">
        <property type="term" value="P:pentose-phosphate shunt"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00956">
        <property type="entry name" value="Transaldolase_FSA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00494">
        <property type="entry name" value="Transaldolase_3b"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001585">
        <property type="entry name" value="TAL/FSA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022999">
        <property type="entry name" value="Transaldolase_3B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004731">
        <property type="entry name" value="Transaldolase_3B/F6P_aldolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018225">
        <property type="entry name" value="Transaldolase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033919">
        <property type="entry name" value="TSA/FSA_arc/bac"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10683">
        <property type="entry name" value="PTHR10683"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00923">
        <property type="entry name" value="TAL_FSA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00875">
        <property type="entry name" value="fsa_talC_mipB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01054">
        <property type="entry name" value="TRANSALDOLASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00958">
        <property type="entry name" value="TRANSALDOLASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7 9" id="KW-0570">Pentose shunt</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 9" id="KW-0704">Schiff base</keyword>
    <keyword evidence="6 9 10" id="KW-0808">Transferase</keyword>
    <feature type="active site" description="Schiff-base intermediate with substrate" evidence="9">
        <location>
            <position position="83"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001469"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00005740"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023126"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023270"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00494"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ71628.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="217" mass="23287" checksum="D79C616E212EAEC2" modified="2015-12-09" version="1">MKFFVDTADTAEIQELEATGLLDGVTTNPSLIAKSGKNFKDVIAEICKITNGDVSAEVAATDFDTMIKEAHVLRAIADNVVVKLPLTFDGLKACKQLTSEGTKTNVTLCFSANQALLAAKAGATYISPFIGRLDDINLDGMELIREIRVIYDNYGFDTEILAASIRTPNHVKDSAIIGADVVTVPPATLKSLIKHPLTDKGLDAFLSDWAKTGQSIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AA40</accession>
    <name>A0A0M7AA40_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Methyltransferase, FkbM family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02840</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71487.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008196458.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02840"/>
    <dbReference type="EnsemblBacteria" id="CTQ71487">
        <property type="protein sequence ID" value="CTQ71487"/>
        <property type="gene ID" value="LAX5112_02840"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006342">
        <property type="entry name" value="FkbM_mtfrase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05050">
        <property type="entry name" value="Methyltransf_21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01444">
        <property type="entry name" value="fkbM_fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Methyltransf_21" evidence="1">
        <location>
            <begin position="104"/>
            <end position="231"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF05050"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71487.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="281" mass="31578" checksum="054900B7873ED94D" modified="2015-12-09" version="1">MKRDAMVLDTSSPFGTYPPIGLVRTAWRLASQARLPKGLRRYVRLFLGKIFTGPYDLEADGLKFRVYPSDNYDDRKVLIKGRLPEVEEHKLIKPFLSDDAVFVDVGANIGVYTVFAAHHGARVIALEPNAHSVDKLQCNIDANGLQNVTIVPTAAGPRDDVLELYSETSNRGFGTLDKRVTNGEWGGDWAPSTVKMRPLTTIVDEAGVKKIDVLKIDVEGFEDRVLLPFLRHAERSLWPRVILLETNCRPYWSEDCLTELANRSYKVTGRTNDNMVFELTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AA65</accession>
    <name>A0A0M7AA65_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Phosphate-binding protein PstS</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">pstS</name>
        <name evidence="3" type="ORF">LAX5112_02536</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70514.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672109.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02536"/>
    <dbReference type="EnsemblBacteria" id="CTQ70514">
        <property type="protein sequence ID" value="CTQ70514"/>
        <property type="gene ID" value="LAX5112_02536"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024370">
        <property type="entry name" value="PBP_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12849">
        <property type="entry name" value="PBP_like_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809546" evidence="1">
        <location>
            <begin position="26"/>
            <end position="345"/>
        </location>
    </feature>
    <feature type="domain" description="PBP_domain" evidence="2">
        <location>
            <begin position="22"/>
            <end position="312"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF12849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ70514.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="345" mass="36534" checksum="7DDA39947DB70BDD" modified="2015-12-09" version="1">MKFTTLVSATALAVASTAFVGAAQARDQVQVAGSSTVLPYASIVAEVFGENSDFPTPVVESGGSSAGLKRFCEGVGENTIDVANASRKIREKEIKACAENGVTDIMEVRIGYDGIVFASQKDGPAFTAFTPVQWHNALAPKVLVDGAIVDNPYTKWSEVDASLPDVEIAAFIPGTKHGTREVFEEKVLLVGCEESGAMKAMMDGGMSEDDAEDACLAVRTDGKSVDIDGDYTETLARIDSNPNGVGVFGLAFYENNTDKLKVATMSDIAPSTETISTGEYPVSRPLFFYVKKAHIGVIPGLKEYAQFFVADEIAGPQGPLAQYGLVSDPELAATQASIEAEDTMK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAC0</accession>
    <name>A0A0M7AAC0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Flagellar biosynthesis regulatory protein FlaF</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02746</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71180.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02746"/>
    <dbReference type="EnsemblBacteria" id="CTQ71180">
        <property type="protein sequence ID" value="CTQ71180"/>
        <property type="gene ID" value="LAX5112_02746"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044781">
        <property type="term" value="P:bacterial-type flagellum organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010845">
        <property type="entry name" value="FlaF"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07309">
        <property type="entry name" value="FlaF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0966">Cell projection</keyword>
    <keyword evidence="1" id="KW-0969">Cilium</keyword>
    <keyword evidence="1" id="KW-0282">Flagellum</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ71180.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="97" mass="10731" checksum="E5FDEAF64E26C286" modified="2015-12-09" version="1">MKAAARLQLVKDEWDDLSLAEVDDALIYNRKLWTVLVTSATSEESSLPLEIKNNIGSLGVFVFKQTMTVITTQDPEKLGALISINRTIAEGLRAKPE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABK0</accession>
    <name>A0A0M7ABK0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">tRNA(Ile)-lysidine synthetase</fullName>
            <ecNumber evidence="2">6.3.4.19</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">tilS</name>
        <name evidence="8" type="ORF">LAX5112_03199</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + cytidine(34) in tRNA(Ile2) + L-lysine = AMP + diphosphate + H(+) + lysidine(34) in tRNA(Ile2)</text>
            <dbReference type="Rhea" id="RHEA:43744"/>
            <dbReference type="Rhea" id="RHEA-COMP:10625"/>
            <dbReference type="Rhea" id="RHEA-COMP:10670"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:32551"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:82748"/>
            <dbReference type="ChEBI" id="CHEBI:83665"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.3.4.19"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="6.3.4.19" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72488.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03199"/>
    <dbReference type="EnsemblBacteria" id="CTQ72488">
        <property type="protein sequence ID" value="CTQ72488"/>
        <property type="gene ID" value="LAX5112_03199"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016879">
        <property type="term" value="F:ligase activity, forming carbon-nitrogen bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006400">
        <property type="term" value="P:tRNA modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="CDD" id="cd01992">
        <property type="entry name" value="PP-ATPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011063">
        <property type="entry name" value="TilS/TtcA_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012094">
        <property type="entry name" value="tRNA_Ile_lys_synt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012795">
        <property type="entry name" value="tRNA_Ile_lys_synt_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43033">
        <property type="entry name" value="PTHR43033"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01171">
        <property type="entry name" value="ATP_bind_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02432">
        <property type="entry name" value="lysidine_TilS_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 8" id="KW-0436">Ligase</keyword>
    <keyword evidence="5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="ATP_bind_3" evidence="7">
        <location>
            <begin position="2"/>
            <end position="151"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000047"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00013267"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF01171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ72488.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="392" mass="43815" checksum="976E0CDA471C89F1" modified="2015-12-09" version="1">MVVVDHQLRPESSQEACFVRELSEQHGLRCHILKWTDDKPETGVQEAARGARYQLIAKQTAVSGFEAVLLAHHLDDQAETFLDRLTRGSGLNGLGAMASDEPEGPAGLRLLRPFLGVPKSRLLATLEERDQKWCEDPSNESLKYKRSRLRSISSTLSEEGLSPSRIATTARQLRRAREALETVLAELFRQHVEEHPAGPVKTSTLVFRAQSEEFRLRLLILMIERVTGRVYQPKLRKIEALDHWILNNNAGRQTLGGAVLEIKRDTLFVWKEIGRSPPKVLENLRGEGNWDARFLFDVQAAAEAPSSSMAVSLGPLFNAPVDRRQVSWPNGWPREAFESAPVFWIGNGPVGVRCAASLIWHDAGRGGCEISLQRIPVPAKLARNYRTDLEGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABQ7</accession>
    <name>A0A0M7ABQ7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DNA ligase (ATP)</fullName>
            <ecNumber evidence="1">6.5.1.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_03030</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="6.5.1.1" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72061.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672518.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03030"/>
    <dbReference type="EnsemblBacteria" id="CTQ72061">
        <property type="protein sequence ID" value="CTQ72061"/>
        <property type="gene ID" value="LAX5112_03030"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003910">
        <property type="term" value="F:DNA ligase (ATP) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3260.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026333">
        <property type="entry name" value="ATP_dep_DNA_lig_pp_1105_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012309">
        <property type="entry name" value="DNA_ligase_ATP-dep_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012310">
        <property type="entry name" value="DNA_ligase_ATP-dep_cent"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016059">
        <property type="entry name" value="DNA_ligase_ATP-dep_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012308">
        <property type="entry name" value="DNA_ligase_ATP-dep_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036599">
        <property type="entry name" value="DNA_ligase_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04679">
        <property type="entry name" value="DNA_ligase_A_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01068">
        <property type="entry name" value="DNA_ligase_A_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04675">
        <property type="entry name" value="DNA_ligase_A_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR04120">
        <property type="entry name" value="DNA_lig_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00697">
        <property type="entry name" value="DNA_LIGASE_A1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50160">
        <property type="entry name" value="DNA_LIGASE_A3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0235">DNA replication</keyword>
    <keyword evidence="2 7" id="KW-0436">Ligase</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DNA_LIGASE_A3" evidence="6">
        <location>
            <begin position="309"/>
            <end position="446"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012727"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50160"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ72061.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="554" mass="62468" checksum="33E6583C5ACA844A" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACH1</accession>
    <name>A0A0M7ACH1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">NAD(P) transhydrogenase subunit alpha part 1</fullName>
            <ecNumber evidence="5">1.6.1.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">pntAA</name>
        <name evidence="5" type="ORF">LAX5112_03145</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the AlaDH/PNT family.</text>
    </comment>
    <dbReference type="EC" id="1.6.1.2" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72337.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672609.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03145"/>
    <dbReference type="EnsemblBacteria" id="CTQ72337">
        <property type="protein sequence ID" value="CTQ72337"/>
        <property type="gene ID" value="LAX5112_03145"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008750">
        <property type="term" value="F:NAD(P)+ transhydrogenase (AB-specific) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008143">
        <property type="entry name" value="Ala_DH/PNT_CS2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007886">
        <property type="entry name" value="AlaDH/PNT_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007698">
        <property type="entry name" value="AlaDH/PNT_NAD(H)-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01262">
        <property type="entry name" value="AlaDh_PNT_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05222">
        <property type="entry name" value="AlaDh_PNT_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01002">
        <property type="entry name" value="AlaDh_PNT_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01003">
        <property type="entry name" value="AlaDh_PNT_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00837">
        <property type="entry name" value="ALADH_PNT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0520">NAD</keyword>
    <keyword evidence="5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AlaDh_PNT_N" evidence="4">
        <location>
            <begin position="4"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="domain" description="AlaDh_PNT_C" evidence="3">
        <location>
            <begin position="148"/>
            <end position="314"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005689"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM01002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM01003"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ72337.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="383" mass="40223" checksum="96AA4712412FEEE0" modified="2015-12-09" version="1">MKIAVPRETDAVETRVSATPDTIKKLIGFGATVVVEKDAGKLSRIPDQDYKDAGAEIAVDYASTVGDADVVLKVRRPSADELGAMKKGALVLASMDPYGNEKDVEAMAKAGITAFAMEFMPRITRAQVMDVLSSQANLAGYQAVIEGAAEYDRAMPMMMTAAGTVPAARVFVMGAGVAGLQAIATARRLGAVVTATDVRPAAKEQVESLGAKFVAVEDEEFKQAETAGGYAKQMSEEYQKKQAELVATHIAKQDIVITTALIPGRPAPQLVSKAMLESMRPGAIVVDLAVERGGNVEGAKPGKIATVAGVKVVGHLNMAARIGASASALYAKNLFAFLETMIDKEAKALKPDFEDELLQATVLTRDGKVVHPAFAPAESSGGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACI9</accession>
    <name>A0A0M7ACI9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Bile acid transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03306</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72798.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672728.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03306"/>
    <dbReference type="EnsemblBacteria" id="CTQ72798">
        <property type="protein sequence ID" value="CTQ72798"/>
        <property type="gene ID" value="LAX5112_03306"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1530.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002657">
        <property type="entry name" value="BilAc:Na_symport/Acr3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004710">
        <property type="entry name" value="Bilac:Na_transpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038770">
        <property type="entry name" value="Na+/solute_symporter_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10361">
        <property type="entry name" value="PTHR10361"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01758">
        <property type="entry name" value="SBF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="17"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="48"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="77"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="104"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="148"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="182"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="213"/>
            <end position="237"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="258"/>
            <end position="281"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ72798.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="300" mass="31747" checksum="1E0A79861F30046A" modified="2015-12-09" version="1">MTNIDAAVLNFSPDSMLILNGVLAIVMFAVALDITPNDFRALLRTPKPFLTGILSQFVVLPALTFLLVLAVRPQGSVALGLILVAACPGGNISNYITHRAGGNAALAVSLTAFTTVGTVLFTPLNIAFWGSLYGPSRAFMTSVAIDPVQVAATVSLMLVLPLALGMLVNRNLPQLAWHLRKPLQMLSMTIFISFIGIALYGNWDFLGAFGPDIVPLVIAHNGIALLGGYMVATIAGLSPYDRRAISIETGIQNSGLGLILIFGFFHGLGGMAVVAAFWGIWHAVSGLALAKWFSRTVAAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADI1</accession>
    <name>A0A0M7ADI1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Outer membrane protein assembly factor BamA</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6 8" type="primary">bamA</name>
        <name evidence="8" type="ORF">LAX5112_03456</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Part of the Bam complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 6">Cell outer membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the BamA family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73195.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672857.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03456"/>
    <dbReference type="EnsemblBacteria" id="CTQ73195">
        <property type="protein sequence ID" value="CTQ73195"/>
        <property type="gene ID" value="LAX5112_03456"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009279">
        <property type="term" value="C:cell outer membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043165">
        <property type="term" value="P:Gram-negative-bacterium-type cell outer membrane assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051205">
        <property type="term" value="P:protein insertion into membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01430">
        <property type="entry name" value="OM_assembly_BamA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000184">
        <property type="entry name" value="Bac_surfAg_D15"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010827">
        <property type="entry name" value="BamA/TamA_POTRA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039910">
        <property type="entry name" value="D15-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023707">
        <property type="entry name" value="OM_assembly_BamA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034746">
        <property type="entry name" value="POTRA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12815">
        <property type="entry name" value="PTHR12815"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12815:SF23">
        <property type="entry name" value="PTHR12815:SF23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01103">
        <property type="entry name" value="Omp85"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07244">
        <property type="entry name" value="POTRA"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006076">
        <property type="entry name" value="OM_assembly_OMP85"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03303">
        <property type="entry name" value="OM_YaeT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51779">
        <property type="entry name" value="POTRA"/>
        <property type="match status" value="4"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0998">Cell outer membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6" id="KW-0677">Repeat</keyword>
    <keyword evidence="6" id="KW-0732">Signal</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2 6" id="KW-1134">Transmembrane beta strand</keyword>
    <feature type="signal peptide" evidence="6">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5008992015" description="Outer membrane protein assembly factor BamA" evidence="6">
        <location>
            <begin position="20"/>
            <end position="792"/>
        </location>
    </feature>
    <feature type="domain" description="POTRA" evidence="7">
        <location>
            <begin position="40"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="domain" description="POTRA" evidence="7">
        <location>
            <begin position="108"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="domain" description="POTRA" evidence="7">
        <location>
            <begin position="188"/>
            <end position="276"/>
        </location>
    </feature>
    <feature type="domain" description="POTRA" evidence="7">
        <location>
            <begin position="361"/>
            <end position="434"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004442"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022452"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01430"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51779"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ73195.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="792" mass="88054" checksum="FF7B24B6C1FE4D63" modified="2015-12-09" version="1" precursor="true"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADQ9</accession>
    <name>A0A0M7ADQ9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Protein-glutamate methylesterase/protein-glutamine glutaminase</fullName>
            <ecNumber evidence="4">3.1.1.61</ecNumber>
            <ecNumber evidence="4">3.5.1.44</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4 10" type="primary">cheB</name>
        <name evidence="10" type="ORF">LAX5112_03224</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>H2O + L-glutaminyl-[protein] = L-glutamyl-[protein] + NH4(+)</text>
            <dbReference type="Rhea" id="RHEA:16441"/>
            <dbReference type="Rhea" id="RHEA-COMP:10207"/>
            <dbReference type="Rhea" id="RHEA-COMP:10208"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="ChEBI" id="CHEBI:29973"/>
            <dbReference type="ChEBI" id="CHEBI:30011"/>
            <dbReference type="EC" id="3.5.1.44"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 4">
            <text>[protein]-L-glutamate 5-O-methyl ester + H2O = H(+) + L-glutamyl-[protein] + methanol</text>
            <dbReference type="Rhea" id="RHEA:23236"/>
            <dbReference type="Rhea" id="RHEA-COMP:10208"/>
            <dbReference type="Rhea" id="RHEA-COMP:10311"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17790"/>
            <dbReference type="ChEBI" id="CHEBI:29973"/>
            <dbReference type="ChEBI" id="CHEBI:82795"/>
            <dbReference type="EC" id="3.1.1.61"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="domain">
        <text evidence="4">Contains a C-terminal catalytic domain, and an N-terminal region which modulates catalytic activity.</text>
    </comment>
    <comment type="PTM">
        <text evidence="4">Phosphorylated by CheA. Phosphorylation of the N-terminal regulatory domain activates the methylesterase activity.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the CheB family.</text>
    </comment>
    <dbReference type="EC" id="3.1.1.61" evidence="4"/>
    <dbReference type="EC" id="3.5.1.44" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72556.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03224"/>
    <dbReference type="EnsemblBacteria" id="CTQ72556">
        <property type="protein sequence ID" value="CTQ72556"/>
        <property type="gene ID" value="LAX5112_03224"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000156">
        <property type="term" value="F:phosphorelay response regulator activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008984">
        <property type="term" value="F:protein-glutamate methylesterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050568">
        <property type="term" value="F:protein-glutamine glutaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006935">
        <property type="term" value="P:chemotaxis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018277">
        <property type="term" value="P:protein deamination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006482">
        <property type="term" value="P:protein demethylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd16432">
        <property type="entry name" value="CheB_Rec"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.180">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00099">
        <property type="entry name" value="CheB_chemtxs"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008248">
        <property type="entry name" value="CheB-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035909">
        <property type="entry name" value="CheB_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000673">
        <property type="entry name" value="Sig_transdc_resp-reg_Me-estase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01339">
        <property type="entry name" value="CheB_methylest"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000876">
        <property type="entry name" value="RR_chemtxs_CheB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52738">
        <property type="entry name" value="SSF52738"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50122">
        <property type="entry name" value="CHEB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 4 5" id="KW-0145">Chemotaxis</keyword>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 4 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4 6" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="8">
        <location>
            <begin position="20"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="domain" description="CheB-type methylesterase" evidence="9">
        <location>
            <begin position="209"/>
            <end position="405"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="160"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="164"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="active site" evidence="4 5">
        <location>
            <position position="223"/>
        </location>
    </feature>
    <feature type="active site" evidence="4 5">
        <location>
            <position position="251"/>
        </location>
    </feature>
    <feature type="active site" evidence="4 5">
        <location>
            <position position="347"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="4 6">
        <location>
            <position position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000941"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022500"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00099"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00050"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50122"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ72556.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="407" mass="42734" checksum="6D48E438CE5F31C2" modified="2015-12-09" version="1">MAFAQRNVAAGVTPGADPIKVMVVDDAVVIRGLLTRWLGEDKALKVVGSHRNGRLAVEDIEKSNPDVVVLDIEMPEMDGMTALPLMLAKKRDLIVIMASTLTRRNAEVSLKALSLGAADYVPKPESTSEVTTSVDFRRELIDKVKALGARAIRMRAPVRTMRAETRAGQTSQPSAPTSPAARSNVDTRASFRGAGPQGAVAAPKFKTRPYSSARPRILAIGSSTGGPQALQEVMKEIGTAMNDVPVVITQHMPPTFTAILAEHMGKAALRPSKEGEDGEILKPGNIYVAPGGKHMTVEKEGGAVKIRLNDGPPVNFCKPAVDPLFDSVSKAYGSACLGLILTGMGSDGANGVRTIAAGGGSIITQDEETSVVWGMPGAAANTGMCSEVLPLKAIGPKVSRVLKGSTR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADW6</accession>
    <name>A0A0M7ADW6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Carbamoyl phosphate synthase-like protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_02977</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71933.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672481.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02977"/>
    <dbReference type="EnsemblBacteria" id="CTQ71933">
        <property type="protein sequence ID" value="CTQ71933"/>
        <property type="gene ID" value="LAX5112_02977"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011761">
        <property type="entry name" value="ATP-grasp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003806">
        <property type="entry name" value="ATP-grasp_PylC-type"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02655">
        <property type="entry name" value="ATP-grasp_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50975">
        <property type="entry name" value="ATP_GRASP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ATP-grasp" evidence="3">
        <location>
            <begin position="124"/>
            <end position="303"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="389"/>
            <end position="416"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00409"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ71933.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="416" mass="45455" checksum="9B39F44D68C25BBA" modified="2015-12-09" version="1">MATETTPKTVLLTLGRLPKSLELARALKGAGCRVLVADPFAWHLSRPSNAVDKCYQTPPPAKQQSEYLDALLTIIKAENVDLVVPVSEEALHVSLLAPRLPERTQIFTNPHGVLWDLNDKYLFNRLAQSAGLPAPETHLANDPEAARLVQTTPCVFKPRIGCSGQKMQMLTPDAVPEGLLSDADAIVQKRVFGRELSTLTLCQDGKILAHVTYEGLVFSGTVAVCFQRVEDAPQVAQWVADFVAANRYSYFLAFDFIVDQDGTPWPLECNPRLTSGIHFMEHGDLAAAVCDPDNAPPVRLKAKKRFQEGHTTLLQVYGSVLKPKQMARRAGAMVTSRDVLWSGSDPLPFPVMTFSSWPVLKQVLFGGKTFGEAATLDIAWPAGFPEANATRQARAPQPVRTEQAVSAADPVNAHET</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEI2</accession>
    <name>A0A0M7AEI2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">HTH-type transcriptional repressor Bm3R1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">bm3R1</name>
        <name evidence="3" type="ORF">LAX5112_03026</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72054.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672515.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72054">
        <property type="protein sequence ID" value="CTQ72054"/>
        <property type="gene ID" value="LAX5112_03026"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023772">
        <property type="entry name" value="DNA-bd_HTH_TetR-type_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041669">
        <property type="entry name" value="TetR_C_15"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17918">
        <property type="entry name" value="TetR_C_15"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00440">
        <property type="entry name" value="TetR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00455">
        <property type="entry name" value="HTHTETR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01081">
        <property type="entry name" value="HTH_TETR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50977">
        <property type="entry name" value="HTH_TETR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH tetR-type" evidence="2">
        <location>
            <begin position="17"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="1">
        <location>
            <begin position="40"/>
            <end position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ72054.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="216" mass="23817" checksum="AFB6FFAA2BA40475" modified="2015-12-09" version="1">MDLAPTRRRRPKQQRSRLMVDFILEAASQVFDEEGYNGATTNMIAERAGISIGSLYQYFPNKGALILELRFTHRAHVLKTVETAMATSDHLPLPDAIRKIVDANFQVHLNAPRLNAAFEEQTPAQTLSEDPDGFHRKIDTAATSFLQVRKNEISAPDLKTAGFVIRNLIPAVLHAAIKDGQIVQDPDLVKTHLAGSIMGCLRPAAPALNGFIPQET</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEN2</accession>
    <name>A0A0M7AEN2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Cytochrome oxidase maturation protein, cbb3-type</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03054</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72104.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008193235.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03054"/>
    <dbReference type="EnsemblBacteria" id="CTQ72104">
        <property type="protein sequence ID" value="CTQ72104"/>
        <property type="gene ID" value="LAX5112_03054"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004714">
        <property type="entry name" value="Cyt_oxidase_maturation_cbb3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR41532">
        <property type="entry name" value="PTHR41532"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03597">
        <property type="entry name" value="FixS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00847">
        <property type="entry name" value="ccoS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="26"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72104.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="54" mass="6073" checksum="EE47A4B91A953247" modified="2015-12-09" version="1">MDVLIFLIPIALVLGGVGLVAFLWSLKTGQYDDLEGAKWRILDDDDLPERKNTQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEN6</accession>
    <name>A0A0M7AEN6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03597</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73615.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ73615">
        <property type="protein sequence ID" value="CTQ73615"/>
        <property type="gene ID" value="LAX5112_03597"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ73615.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="61" mass="6918" checksum="E6DD8AF1040E7844" modified="2015-12-09" version="1">MKKFKKRLDLAAAVLKVTLLVLKNVDVLIELLSKVVNYPGSNVRQLQVLILEKRKTNICAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="32" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AET9</accession>
    <name>A0A0M7AET9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Glutamate--tRNA ligase</fullName>
            <ecNumber evidence="8">6.1.1.17</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">Glutamyl-tRNA synthetase</fullName>
            <shortName evidence="8">GluRS</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="13" type="primary">gltX_2</name>
        <name evidence="8" type="synonym">gltX</name>
        <name evidence="13" type="ORF">LAX5112_03437</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 8">
            <text>ATP + L-glutamate + tRNA(Glu) = AMP + diphosphate + L-glutamyl-tRNA(Glu)</text>
            <dbReference type="Rhea" id="RHEA:23540"/>
            <dbReference type="Rhea" id="RHEA-COMP:9663"/>
            <dbReference type="Rhea" id="RHEA-COMP:9680"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78520"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.17"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="8">Monomer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.17" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73141.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672844.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03437"/>
    <dbReference type="EnsemblBacteria" id="CTQ73141">
        <property type="protein sequence ID" value="CTQ73141"/>
        <property type="gene ID" value="LAX5112_03437"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004818">
        <property type="term" value="F:glutamate-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006424">
        <property type="term" value="P:glutamyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00808">
        <property type="entry name" value="GluRS_core"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.350">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00022">
        <property type="entry name" value="Glu_tRNA_synth_type1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045462">
        <property type="entry name" value="aa-tRNA-synth_I_cd-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020751">
        <property type="entry name" value="aa-tRNA-synth_I_codon-bd_sub2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001412">
        <property type="entry name" value="aa-tRNA-synth_I_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008925">
        <property type="entry name" value="aa_tRNA-synth_I_cd-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004527">
        <property type="entry name" value="Glu-tRNA-ligase_bac/mito"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000924">
        <property type="entry name" value="Glu/Gln-tRNA-synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020058">
        <property type="entry name" value="Glu/Gln-tRNA-synth_Ib_cat-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033910">
        <property type="entry name" value="GluRS_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19269">
        <property type="entry name" value="Anticodon_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00749">
        <property type="entry name" value="tRNA-synt_1c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00987">
        <property type="entry name" value="TRNASYNTHGLU"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48163">
        <property type="entry name" value="SSF48163"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00464">
        <property type="entry name" value="gltX_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00178">
        <property type="entry name" value="AA_TRNA_LIGASE_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 8 9" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="5 8 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 8 9" id="KW-0436">Ligase</keyword>
    <keyword evidence="4 8 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6 8 9" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="tRNA-synt_1c" evidence="11">
        <location>
            <begin position="5"/>
            <end position="307"/>
        </location>
    </feature>
    <feature type="domain" description="Anticodon_2" evidence="12">
        <location>
            <begin position="339"/>
            <end position="472"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="113"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="'HIGH' region" evidence="8">
        <location>
            <begin position="11"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="'KMSKS' region" evidence="8">
        <location>
            <begin position="240"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="243"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001818"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007894"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00022"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU363037"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF00749"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF19269"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="CTQ73141.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="474" mass="52184" checksum="C43676FDF1C91B94" modified="2015-12-09" version="1">MAQDIVTRFAPSPTGFLHIGGARTALFNWLFAKHHGGKMLLRIEDTDRARSTQEAVDALMDGLSWLGLDWDGEPISQFSRVARHKEVVDQMLENGTAYRCYSTPEEVDAMREKARAEGRPPRYDGTWRDKDASEAPEGIDPVIRLKAPQAGETVVDDMVQGRVVIPNKDLDDFVLLRSDGTPTYMLAVVVDDHDMGITHIIRGVDHLTNAARQTLIFNANGWDVPKMAHIPLIHGPDGAKLSKRHGATGAEAYRALGYLPQAMRNYLARLGWSHGDEEIMSLEDMVKWFGMDAVGQSAARFDFKKLENLNGHYMRATDDAELLEHWKVYLAHAGDGAAVLEWMSDAANAQTALTALPGLKERAKTLVELTDSASYLWRQRPLENDEKAIKILTDDARAILGDLNGVLSGVADWQAEPLEAAVKAYAEDKDVKLGKVAQPLRAALTGRGTSPGIYDVLIALGRDESLARIADQAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEV2</accession>
    <name>A0A0M7AEV2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Putative diguanylate cyclase YedQ</fullName>
            <ecNumber evidence="4">2.7.7.65</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">yedQ_2</name>
        <name evidence="4" type="ORF">LAX5112_03084</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.7.7.65" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72174.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672570.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03084"/>
    <dbReference type="EnsemblBacteria" id="CTQ72174">
        <property type="protein sequence ID" value="CTQ72174"/>
        <property type="gene ID" value="LAX5112_03084"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052621">
        <property type="term" value="F:diguanylate cyclase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd01949">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00130">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.450.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003018">
        <property type="entry name" value="GAF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029016">
        <property type="entry name" value="GAF-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000160">
        <property type="entry name" value="GGDEF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001610">
        <property type="entry name" value="PAC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000014">
        <property type="entry name" value="PAS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000700">
        <property type="entry name" value="PAS-assoc_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035965">
        <property type="entry name" value="PAS-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013656">
        <property type="entry name" value="PAS_4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01590">
        <property type="entry name" value="GAF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00990">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08448">
        <property type="entry name" value="PAS_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13426">
        <property type="entry name" value="PAS_9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00065">
        <property type="entry name" value="GAF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00267">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00086">
        <property type="entry name" value="PAC"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00091">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55785">
        <property type="entry name" value="SSF55785"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00254">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00229">
        <property type="entry name" value="sensory_box"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50887">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50113">
        <property type="entry name" value="PAC"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50112">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PAC" evidence="2">
        <location>
            <begin position="79"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="domain" description="PAS" evidence="1">
        <location>
            <begin position="261"/>
            <end position="331"/>
        </location>
    </feature>
    <feature type="domain" description="PAC" evidence="2">
        <location>
            <begin position="333"/>
            <end position="385"/>
        </location>
    </feature>
    <feature type="domain" description="GGDEF" evidence="3">
        <location>
            <begin position="582"/>
            <end position="714"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50112"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50113"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ72174.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="722" mass="81140" checksum="E1887E4051ABC3B5" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFE5</accession>
    <name>A0A0M7AFE5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Precorrin-8X methylmutase</fullName>
            <ecNumber evidence="6">5.4.99.61</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">cobH</name>
        <name evidence="6" type="ORF">LAX5112_03661</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Cofactor biosynthesis; adenosylcobalamin biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the CobH/CbiC family.</text>
    </comment>
    <dbReference type="EC" id="5.4.99.61" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73798.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673003.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03661"/>
    <dbReference type="EnsemblBacteria" id="CTQ73798">
        <property type="protein sequence ID" value="CTQ73798"/>
        <property type="gene ID" value="LAX5112_03661"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00148"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016993">
        <property type="term" value="F:precorrin-8X methylmutase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009236">
        <property type="term" value="P:cobalamin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10230">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003722">
        <property type="entry name" value="Cbl_synth_CobH/CbiC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036588">
        <property type="entry name" value="CobH/CbiC_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02570">
        <property type="entry name" value="CbiC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63965">
        <property type="entry name" value="SSF63965"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0169">Cobalamin biosynthesis</keyword>
    <keyword evidence="4 6" id="KW-0413">Isomerase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CbiC" evidence="5">
        <location>
            <begin position="21"/>
            <end position="214"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004953"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009774"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022573"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF02570"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ73798.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="221" mass="23125" checksum="D5BDDEFECAFBBB8F" modified="2015-12-09" version="1">MTLLPANDTPQYAYETDPAAIYRQSFSIVRREADLSHIPDALHPTAVRLIHSCGMTDLPQDLKWSDDVLEAAQSAFAKGAPVFCDVEMVAHGIIKNRLPEGSEVICTLNDPSVPGLASELKTTRSAAAVELWRDRLDGAIVAIGNAPTALFHLLQMIAAGGPKPAVILGFPVGFVGAAESKDALAANPYSVPYLAVKGRRGGSAMAAAAVNALAAGLPEEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFZ7</accession>
    <name>A0A0M7AFZ7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03517</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73362.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ73362">
        <property type="protein sequence ID" value="CTQ73362"/>
        <property type="gene ID" value="LAX5112_03517"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ73362.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="287" mass="31807" checksum="DD245E25E315C066" modified="2015-12-09" version="1">MSQSKGRIERLIDAIATEFQSHLIDLRNTSTSLEIRDGAVEKMISRQAPFGVIGLKILVSDPGDAGRYIEHAWNFSIGITGCVYTLLDVDYQNDVWIGDETSAGFAGHEHVAYKTAEQMMAFHGDEFGIGQLFTERVGALCPSLLEKPPLFFRLPRRAPPAYRYTLAPDHVRAALGLSTADPTILLEVMIKEHGIDPYTILLSFQSDTNFWLVDLPDTLADRYQHGLIGEDLGEHHANLEVGATITADTSRKTYRFASGSTAEETRDRSSYSMSGTVSARGYMTPWT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AG15</accession>
    <name>A0A0M7AG15_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Flp pilus assembly protein TadG</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03757</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74095.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673079.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03757"/>
    <dbReference type="EnsemblBacteria" id="CTQ74095">
        <property type="protein sequence ID" value="CTQ74095"/>
        <property type="gene ID" value="LAX5112_03757"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.410">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028087">
        <property type="entry name" value="Tad_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036465">
        <property type="entry name" value="vWFA_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13400">
        <property type="entry name" value="Tad"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53300">
        <property type="entry name" value="SSF53300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="17"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="domain" description="Tad" evidence="2">
        <location>
            <begin position="15"/>
            <end position="61"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13400"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ74095.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="481" mass="52632" checksum="D93A9BCE748463B5" modified="2015-12-09" version="1">MIKALISKFNRNHDGSILPIFAGMVLVLVVIGGAAIDISRTVNAREKLAYAIDAAALSVATDLSTSALSNAQIKQRIENSFRANLADEEFLDQAIENLSFVIDDDEGTVTVTSFAGLNNYFVNVGGLGKDMLGPDAFNFGTNARVNYSRFDVELALIVDVTGSMRGDMAALREASTDVVNILLPEDQDQSEAKVRISLVPYSTGVNLGVYADVVKGGAYGFADSSDCVTERQDYDDGTELYDVKYTDSAYNYYTNSNPPPKATFYGDGSNDGCSSDSVMIPLTNDRDELTDAIDDLEAEGWTAGHTGAIWGWNSLSPNYANLWPAASAPAAYNDDNILKFAIMMTDGNNNRAFDLPLTEYKKVDEECSRVWRRGRWRTRCTDVYDWVDIPEIDLEWEVNSDTGEGYSNEASVRHRAYCTAMKDAGIEVFGVYFGSNNSSTGARNMQNCASSGNYYQASSSEGLKQAFSNIAKKIQSIYLSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AG67</accession>
    <name>A0A0M7AG67_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Ribosome-recycling factor</fullName>
            <shortName evidence="3">RRF</shortName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">Ribosome-releasing factor</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3 6" type="primary">frr</name>
        <name evidence="6" type="ORF">LAX5112_03461</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the RRF family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73210.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008196500.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03461"/>
    <dbReference type="EnsemblBacteria" id="CTQ73210">
        <property type="protein sequence ID" value="CTQ73210"/>
        <property type="gene ID" value="LAX5112_03461"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006415">
        <property type="term" value="P:translational termination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00520">
        <property type="entry name" value="RRF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.132.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00040">
        <property type="entry name" value="RRF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002661">
        <property type="entry name" value="Ribosome_recyc_fac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023584">
        <property type="entry name" value="Ribosome_recyc_fac_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036191">
        <property type="entry name" value="RRF_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20982">
        <property type="entry name" value="PTHR20982"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01765">
        <property type="entry name" value="RRF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55194">
        <property type="entry name" value="SSF55194"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00496">
        <property type="entry name" value="frr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2 3" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RRF" evidence="5">
        <location>
            <begin position="22"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="139"/>
            <end position="159"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005912"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00040"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF01765"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ73210.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="187" mass="20499" checksum="8A2EDBC18BDA77A1" modified="2015-12-09" version="1">MSVEGVDLDDLKRRMQGALSSLKTDFSGLRTGRASASMLDPISVDAYGQSMPLSQVGTVSVPEPRMVAIQVWDKSMVAAVEKAIRESNLGLNPVVDGQLLRLPIPELNQERRQELIKVAHKYAEQAKVAIRHVRRDGMDDAKKAEKDGEISQDDSRVASDEVQKLTDGMIGEVDAMLAKKEAEISQV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGJ2</accession>
    <name>A0A0M7AGJ2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">sn-glycerol-3-phosphate transport system permease protein UgpA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ugpA_1</name>
        <name evidence="7" type="ORF">LAX5112_03574</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73552.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03574"/>
    <dbReference type="EnsemblBacteria" id="CTQ73552">
        <property type="protein sequence ID" value="CTQ73552"/>
        <property type="gene ID" value="LAX5112_03574"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="59"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="92"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="151"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="191"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="253"/>
            <end position="273"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="57"/>
            <end position="269"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ73552.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="280" mass="31207" checksum="B2364E9D238F8663" modified="2015-12-09" version="1">MLLMPQLVIVTVFFLWPAAEAVQSSFYLEDPFGFGATFVGFDNFVDTVTSTDYGRVARFTAVFTFFVTFLSLGIALLLAVKADKVLRGGSSYKTLLMWVYAVAPPVAGLIGVMLFDQHVGPIVELFALFGWEMQIGVDYFDTSFAMTVTAVWKQVPVNFIFFLSGLQGISKAVQEAASIDCRSSFRRFWTVTFPLLAPTGFFLLIINITYAFFDTFGIVDIIVKQEPGNNPVTLVYKVFLDGFRGNDLGGSSAQSVILMVLVFILTVVQFRLIERRVHYT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGP9</accession>
    <name>A0A0M7AGP9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Integrase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_03596</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73612.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03596"/>
    <dbReference type="EnsemblBacteria" id="CTQ73612">
        <property type="protein sequence ID" value="CTQ73612"/>
        <property type="gene ID" value="LAX5112_03596"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.130">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.443.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044068">
        <property type="entry name" value="CB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011010">
        <property type="entry name" value="DNA_brk_join_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013762">
        <property type="entry name" value="Integrase-like_cat_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002104">
        <property type="entry name" value="Integrase_catalytic"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010998">
        <property type="entry name" value="Integrase_recombinase_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00589">
        <property type="entry name" value="Phage_integrase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56349">
        <property type="entry name" value="SSF56349"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51900">
        <property type="entry name" value="CB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51898">
        <property type="entry name" value="TYR_RECOMBINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0229">DNA integration</keyword>
    <keyword evidence="3" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="2 4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Core-binding (CB)" evidence="6">
        <location>
            <begin position="73"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="domain" description="Tyr recombinase" evidence="5">
        <location>
            <begin position="180"/>
            <end position="349"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022908"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01248"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ73612.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="360" mass="41473" checksum="D59518577A3C48EF" modified="2015-12-09" version="1">MASYRKHKGRCTATVRIPADFTGPVAKKSLSETFRTKTDAKVWAQDVETQIKLGTWKDPRLEQRMTSGRWEDRPLRETIERYRKAVTPTMKGMKQETSLLKRWERHPLAQRPIRTINRSDIAAYRDERVEQGRAPQTVRNELNKLSAVFQYAKYDWGYELVNPVRELTQRKGALPKARKGRDRRLVGDEQERLEEALLAGDDGENMLALWRLLLDTGMRLSEVLSLDAGCVRDGDRSLVLTETKNGDDREVLVSDEAWADLLEHVAGLDDVEPLINLHVDAVEYRCRIARKAANVTNFKLHDLRHEALSRMAARDVDLKTMMLQSGHKTPAMLLRYLNPTAEERRRKLFGEGSRTESQVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AH95</accession>
    <name>A0A0M7AH95_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 6">Nucleoside diphosphate kinase</fullName>
            <shortName evidence="4">NDK</shortName>
            <shortName evidence="4">NDP kinase</shortName>
            <ecNumber evidence="4 6">2.7.4.6</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">Nucleoside-2-P kinase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="4 8" type="primary">ndk</name>
        <name evidence="8" type="ORF">LAX5112_03891</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4 6">
            <text>a 2'-deoxyribonucleoside 5'-diphosphate + ATP = a 2'-deoxyribonucleoside 5'-triphosphate + ADP</text>
            <dbReference type="Rhea" id="RHEA:44640"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61560"/>
            <dbReference type="ChEBI" id="CHEBI:73316"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.4.6"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>a ribonucleoside 5'-diphosphate + ATP = a ribonucleoside 5'-triphosphate + ADP</text>
            <dbReference type="Rhea" id="RHEA:18113"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:57930"/>
            <dbReference type="ChEBI" id="CHEBI:61557"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.4.6"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="4">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="4">Homotetramer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 5">Belongs to the NDK family.</text>
    </comment>
    <dbReference type="EC" id="2.7.4.6" evidence="4 6"/>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74525.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673196.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03891"/>
    <dbReference type="EnsemblBacteria" id="CTQ74525">
        <property type="protein sequence ID" value="CTQ74525"/>
        <property type="gene ID" value="LAX5112_03891"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004550">
        <property type="term" value="F:nucleoside diphosphate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006241">
        <property type="term" value="P:CTP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006183">
        <property type="term" value="P:GTP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006165">
        <property type="term" value="P:nucleoside diphosphate phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006228">
        <property type="term" value="P:UTP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.141">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00451">
        <property type="entry name" value="NDP_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034907">
        <property type="entry name" value="NDK-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036850">
        <property type="entry name" value="NDK-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001564">
        <property type="entry name" value="Nucleoside_diP_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023005">
        <property type="entry name" value="Nucleoside_diP_kinase_AS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00334">
        <property type="entry name" value="NDK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01243">
        <property type="entry name" value="NUCDPKINASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM00562">
        <property type="entry name" value="NDK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54919">
        <property type="entry name" value="SSF54919"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00469">
        <property type="entry name" value="NDP_KINASES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 4 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 6 8" id="KW-0418">Kinase</keyword>
    <keyword evidence="4" id="KW-0460">Magnesium</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3 4" id="KW-0546">Nucleotide metabolism</keyword>
    <keyword evidence="4 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="1 4" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6 8" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="NDK" evidence="7">
        <location>
            <begin position="3"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="active site" description="Pros-phosphohistidine intermediate" evidence="4">
        <location>
            <position position="117"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="11"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="59"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="87"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="93"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="104"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="114"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023080"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00451"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU004011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU004013"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="SMART" id="SM00562"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ74525.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="140" mass="15272" checksum="5643205F28D41F02" modified="2015-12-09" version="1">MAIERTFSMIKPDATKRNLTGAIVKKFEDAGLRVVASKRVWMSIREAEAFYAVHSERPFFGELTEFMSSGPTVVQVLEGENAIAKNREVMGATNPADADEGTIRKEFALSIGENSVHGSDAPETAAEEIAFWFSGTELVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHA0</accession>
    <name>A0A0M7AHA0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_03662</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73802.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673004.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ73802">
        <property type="protein sequence ID" value="CTQ73802"/>
        <property type="gene ID" value="LAX5112_03662"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809324" evidence="3">
        <location>
            <begin position="22"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="33"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="58"/>
            <end position="81"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ73802.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="81" mass="7983" checksum="C3CA39BFB9F3AEEA" modified="2015-12-09" version="1">MTLRIILSAVLPFSAPSAAFAHAGHLGELAGHAHWAGAAALAGAALIAGVVAWAGRKDKDSAADSDEADAEPGETAENPAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHC2</accession>
    <name>A0A0M7AHC2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1 2">Hypoxanthine phosphoribosyltransferase</fullName>
            <ecNumber evidence="1 2">2.4.2.8</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">hpt</name>
        <name evidence="4" type="ORF">LAX5112_03716</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>diphosphate + IMP = 5-phospho-alpha-D-ribose 1-diphosphate + hypoxanthine</text>
            <dbReference type="Rhea" id="RHEA:17973"/>
            <dbReference type="ChEBI" id="CHEBI:17368"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:58017"/>
            <dbReference type="ChEBI" id="CHEBI:58053"/>
            <dbReference type="EC" id="2.4.2.8"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="2">Purine metabolism; IMP biosynthesis via salvage pathway; IMP from hypoxanthine: step 1/1.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the purine/pyrimidine phosphoribosyltransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.4.2.8" evidence="1 2"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ73981.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673051.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03716"/>
    <dbReference type="EnsemblBacteria" id="CTQ73981">
        <property type="protein sequence ID" value="CTQ73981"/>
        <property type="gene ID" value="LAX5112_03716"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00591">
        <property type="reaction ID" value="UER00648"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052657">
        <property type="term" value="F:guanine phosphoribosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004422">
        <property type="term" value="F:hypoxanthine phosphoribosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032264">
        <property type="term" value="P:IMP salvage"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006166">
        <property type="term" value="P:purine ribonucleoside salvage"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06223">
        <property type="entry name" value="PRTases_typeI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2020">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005904">
        <property type="entry name" value="Hxn_phspho_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000836">
        <property type="entry name" value="PRibTrfase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029057">
        <property type="entry name" value="PRTase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00156">
        <property type="entry name" value="Pribosyltran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53271">
        <property type="entry name" value="SSF53271"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01203">
        <property type="entry name" value="HGPRTase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2 4" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="2" id="KW-0460">Magnesium</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="2" id="KW-0660">Purine salvage</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Pribosyltran" evidence="3">
        <location>
            <begin position="8"/>
            <end position="158"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00011895"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU364099"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00156"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ73981.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="186" mass="20391" checksum="773C739D6C330F74" modified="2015-12-09" version="1">MTANIFTLFDEDTIAERVASLAGEITKADPDRLLVVAVLKGSFIFAADLVRAMHRVGLEPEMEFIHLSSYGAGTESQDIRILRDVESDVNGRDIILVDDILESGRTLAFAKDRMINRGAKSVQIAALLDKPERRKAAISADYVGFTCPDKFVVGYGMDMGHAWRQLPFIGYVVPPEAEATDGKTGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHM0</accession>
    <name>A0A0M7AHM0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">NADH-quinone oxidoreductase subunit N</fullName>
            <ecNumber evidence="5">7.1.1.-</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">NADH dehydrogenase I subunit N</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="5">NDH-1 subunit N</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5 8" type="primary">nuoN</name>
        <name evidence="8" type="ORF">LAX5112_03476</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>a quinone + 5 H(+)(in) + NADH = a quinol + 4 H(+)(out) + NAD(+)</text>
            <dbReference type="Rhea" id="RHEA:57888"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:24646"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:132124"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="5">NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1 6">Membrane</location>
            <topology evidence="1 6">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the complex I subunit 2 family.</text>
    </comment>
    <dbReference type="EC" id="7.1.1.-" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73253.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451932.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03476"/>
    <dbReference type="EnsemblBacteria" id="CTQ73253">
        <property type="protein sequence ID" value="CTQ73253"/>
        <property type="gene ID" value="LAX5112_03476"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008137">
        <property type="term" value="F:NADH dehydrogenase (ubiquinone) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048038">
        <property type="term" value="F:quinone binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042773">
        <property type="term" value="P:ATP synthesis coupled electron transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00445">
        <property type="entry name" value="NDH1_NuoN_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010096">
        <property type="entry name" value="NADH-Q_OxRdtase_suN/2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001750">
        <property type="entry name" value="ND/Mrp_mem"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00361">
        <property type="entry name" value="Proton_antipo_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01770">
        <property type="entry name" value="NDH_I_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-0520">NAD</keyword>
    <keyword evidence="8" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5" id="KW-0874">Quinone</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-1278">Translocase</keyword>
    <keyword evidence="2 5 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <keyword evidence="5" id="KW-0830">Ubiquinone</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="39"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="75"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="105"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="203"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="240"/>
            <end position="261"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="273"/>
            <end position="292"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="326"/>
            <end position="347"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="368"/>
            <end position="391"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="403"/>
            <end position="424"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="445"/>
            <end position="463"/>
        </location>
    </feature>
    <feature type="domain" description="Proton_antipo_M" evidence="7">
        <location>
            <begin position="125"/>
            <end position="418"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00445"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU000320"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00361"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ73253.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="479" mass="50998" checksum="7A9564017B7EE04F" modified="2015-12-09" version="1">MSDVTQLPDLMPALPEIILAIGAMVLLMVGAFGGRNISYAVFGGAMGLLGGTFLVLLLVPSFGETFGGSFILDDYAYFLKLVVLVGSFFAIAMSWAYAKSQSFDHFEYPILIILATLGMMLMLSANDMIALYMGLELQSLSLYVVAAINRDSVRSTEAGLKYFVLGALSSGMLLYGMSLVYGFTGQISFAAIAELLSQEGASIGLIIGLTFILAGLAFKISAVPFHMWTPDVYEGAPTPVTAFFAAAPKVAAMGMLVRIVIDAFHPVTSDWQQIIVFVSIASMALGAFAAIGQTNLKRLMAYSSIGHMGYALVGLAAGTQTGVEGVIFYMVAYLGMTLGVFACILSMRRQDGMVEEISDLSGLSQTNLPMAVILGLLMFSLAGIPPLIGFFGKWFVFAAAVEAGLYPLAVIGVLASVVGCYYYLRIVKVMFFDEPAEAFQPMPTELKVVLGLSGVFVVFFWVMPGPVVTAATAAAQSLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AI03</accession>
    <name>A0A0M7AI03_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Response regulator PrrA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">regA</name>
        <name evidence="3" type="ORF">LAX5112_03801</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74221.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673113.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03801"/>
    <dbReference type="EnsemblBacteria" id="CTQ74221">
        <property type="protein sequence ID" value="CTQ74221"/>
        <property type="gene ID" value="LAX5112_03801"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="2">
        <location>
            <begin position="15"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="1">
        <location>
            <position position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ74221.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="185" mass="20757" checksum="1A2C7831015C1BE9" modified="2015-12-09" version="1">MTDPIVSIESLEDKSLLIVDDDKPFQQRLARAMEKRGFSTETADGLQDAVIKISQNAPAFAIVDMRLEDGNGLDVIQQIRARRPDARAIILTGYGNIATAVTAVKMGAIDYLAKPADPDDIIAALARKPEDKAEPPENPMSADRVRWEHIQRVYELCDRNVSETARRLNMHRRTLQRILAKRAPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AID8</accession>
    <name>A0A0M7AID8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Lysozyme M1</fullName>
            <ecNumber evidence="5">3.2.1.17</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">acm_3</name>
        <name evidence="5" type="ORF">LAX5112_04008</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the glycosyl hydrolase 25 family.</text>
    </comment>
    <dbReference type="EC" id="3.2.1.17" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74858.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04008"/>
    <dbReference type="EnsemblBacteria" id="CTQ74858">
        <property type="protein sequence ID" value="CTQ74858"/>
        <property type="gene ID" value="LAX5112_04008"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003796">
        <property type="term" value="F:lysozyme activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016998">
        <property type="term" value="P:cell wall macromolecule catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009253">
        <property type="term" value="P:peptidoglycan catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002053">
        <property type="entry name" value="Glyco_hydro_25"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018077">
        <property type="entry name" value="Glyco_hydro_fam25_subgr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01183">
        <property type="entry name" value="Glyco_hydro_25"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00641">
        <property type="entry name" value="Glyco_25"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51904">
        <property type="entry name" value="GLYCOSYL_HYDROL_F25_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="2 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809511" evidence="4">
        <location>
            <begin position="25"/>
            <end position="243"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010646"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ74858.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="243" mass="28349" checksum="460FF5463D141766" modified="2015-12-09" version="1">MLAMIKTFCSLVGFAFLSACSAYDFPDPTPEDFAVHGIDISRWQGDIDWDRVRQSGVAFAWIKATEGGDHADPRFVDNWIGARKAGVRRGAYHFYYFCRPVEEQISWVKEVVPVDPQALPLVLDMEWNAHSKTCTTRPPRERILPDMKLFLDEMERHYGKRPVIYSSVDFHRDRLVGAFPDEHFWLRSVATYPNNIYEQRDDWVFWQYTAEGRIPGIKGDVDRNAFFGTKSQFRDWLNGDLKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIJ7</accession>
    <name>A0A0M7AIJ7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03872</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74467.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673179.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03872"/>
    <dbReference type="EnsemblBacteria" id="CTQ74467">
        <property type="protein sequence ID" value="CTQ74467"/>
        <property type="gene ID" value="LAX5112_03872"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005229">
        <property type="entry name" value="CHP00255"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013551">
        <property type="entry name" value="DUF1732"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013527">
        <property type="entry name" value="YicC-like_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30636">
        <property type="entry name" value="PTHR30636"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08340">
        <property type="entry name" value="DUF1732"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03755">
        <property type="entry name" value="YicC_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00255">
        <property type="entry name" value="TIGR00255"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="YicC_N" evidence="1">
        <location>
            <begin position="4"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="domain" description="DUF1732" evidence="2">
        <location>
            <begin position="213"/>
            <end position="297"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF08340"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ74467.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="297" mass="32842" checksum="7998F5EA426B39E3" modified="2015-12-09" version="1">MALASMTGFARAPGETGVVRWTWELRSVNGKSLDLRIRIPTGLEALEPKIRERCSKVLRRGNISIGLSMQRDQAENQLQVNEAALESVLSAIRLLETRIPNVAPPTLDGILAQKGVFELKEQEDDEAAQQALHSALLTSLDAALIDLVDMRHSEGAAIGKVVHQQIDTIASLTQAAEDLPARQPEAIKARLKKMVEELLDASETKLDPQRLHQEAVFLATKADIREELDRLHAHVNAVRELLDTGGAIGRRFDFLAQEFNREANTLCSKSNDVDLTAIGLDLKAVIDQMREQIQNLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKC3</accession>
    <name>A0A0M7AKC3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04117</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ75097.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75097">
        <property type="protein sequence ID" value="CTQ75097"/>
        <property type="gene ID" value="LAX5112_04117"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ75097.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="130" mass="12988" checksum="ECB6054F4239D4B3" modified="2015-12-09" version="1">MAAIHGVVVGTTFQIIIAVTADHRVSAGAANQNVVIIAAVERVVASTAFEFVIAVAAAEVVDARTANEAVIAVTTVKHVVTGAADHLVVAGFPVQGIITVVAVQFVVVVASVQSVVAGVAIKVILSGVAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKH1</accession>
    <name>A0A0M7AKH1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7 14">Inosine-5'-monophosphate dehydrogenase</fullName>
            <shortName evidence="7">IMP dehydrogenase</shortName>
            <shortName evidence="7">IMPD</shortName>
            <shortName evidence="7">IMPDH</shortName>
            <ecNumber evidence="7 14">1.1.1.205</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7 16" type="primary">guaB</name>
        <name evidence="16" type="ORF">LAX5112_04048</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="17" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7 14">
            <text>H2O + IMP + NAD(+) = H(+) + NADH + XMP</text>
            <dbReference type="Rhea" id="RHEA:11708"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57464"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:58053"/>
            <dbReference type="EC" id="1.1.1.205"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="7">
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </cofactor>
    </comment>
    <comment type="activity regulation">
        <text evidence="7">Mycophenolic acid (MPA) is a non-competitive inhibitor that prevents formation of the closed enzyme conformation by binding to the same site as the amobile flap. In contrast, mizoribine monophosphate (MZP) is a competitive inhibitor that induces the closed conformation. MPA is a potent inhibitor of mammalian IMPDHs but a poor inhibitor of the bacterial enzymes. MZP is a more potent inhibitor of bacterial IMPDH.</text>
    </comment>
    <comment type="pathway">
        <text evidence="7 14">Purine metabolism; XMP biosynthesis via de novo pathway; XMP from IMP: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Homotetramer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 7 13">Belongs to the IMPDH/GMPR family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.205" evidence="7 14"/>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ74942.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673337.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04048"/>
    <dbReference type="EnsemblBacteria" id="CTQ74942">
        <property type="protein sequence ID" value="CTQ74942"/>
        <property type="gene ID" value="LAX5112_04048"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00601">
        <property type="reaction ID" value="UER00295"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003938">
        <property type="term" value="F:IMP dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006177">
        <property type="term" value="P:GMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00381">
        <property type="entry name" value="IMPDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01964">
        <property type="entry name" value="IMPDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000644">
        <property type="entry name" value="CBS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046342">
        <property type="entry name" value="CBS_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005990">
        <property type="entry name" value="IMP_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015875">
        <property type="entry name" value="IMP_DH/GMP_Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001093">
        <property type="entry name" value="IMP_DH_GMPRt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11911">
        <property type="entry name" value="PTHR11911"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00571">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00478">
        <property type="entry name" value="IMPDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000130">
        <property type="entry name" value="IMPDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00116">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54631">
        <property type="entry name" value="SSF54631"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01302">
        <property type="entry name" value="IMP_dehydrog"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51371">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00487">
        <property type="entry name" value="IMP_DH_GMP_RED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 12" id="KW-0129">CBS domain</keyword>
    <keyword evidence="3 7 14" id="KW-0332">GMP biosynthesis</keyword>
    <keyword evidence="2 7 14" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7 10 14" id="KW-0520">NAD</keyword>
    <keyword evidence="5 7 13" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4 7 11" id="KW-0630">Potassium</keyword>
    <keyword evidence="7 14" id="KW-0658">Purine biosynthesis</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CBS" evidence="15">
        <location>
            <begin position="98"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="domain" description="CBS" evidence="15">
        <location>
            <begin position="165"/>
            <end position="222"/>
        </location>
    </feature>
    <feature type="region of interest" description="IMP binding" evidence="7 9">
        <location>
            <begin position="349"/>
            <end position="351"/>
        </location>
    </feature>
    <feature type="region of interest" description="IMP binding" evidence="7 9">
        <location>
            <begin position="372"/>
            <end position="373"/>
        </location>
    </feature>
    <feature type="region of interest" description="IMP binding" evidence="7 9">
        <location>
            <begin position="396"/>
            <end position="400"/>
        </location>
    </feature>
    <feature type="active site" description="Thioimidate intermediate" evidence="7 8">
        <location>
            <position position="316"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="7 8">
        <location>
            <position position="412"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <begin position="259"/>
            <end position="261"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="259"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7 10">
        <location>
            <begin position="309"/>
            <end position="311"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7 11">
        <location>
            <position position="311"/>
        </location>
        <ligand>
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7 11">
        <location>
            <position position="313"/>
        </location>
        <ligand>
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7 9">
        <location>
            <position position="314"/>
        </location>
        <ligand>
            <name>IMP</name>
            <dbReference type="ChEBI" id="CHEBI:58053"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7 11">
        <location>
            <position position="316"/>
        </location>
        <ligand>
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7 9">
        <location>
            <position position="427"/>
        </location>
        <ligand>
            <name>IMP</name>
            <dbReference type="ChEBI" id="CHEBI:58053"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="481"/>
        </location>
        <ligand>
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
            <note>ligand shared between two tetrameric partners</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="482"/>
        </location>
        <ligand>
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
            <note>ligand shared between two tetrameric partners</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="483"/>
        </location>
        <ligand>
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
            <note>ligand shared between two tetrameric partners</note>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005502"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022749"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022958"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023122"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01964"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR000130-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR000130-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR000130-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRSR" id="PIRSR000130-4"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00703"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU003927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="RuleBase" id="RU003928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS51371"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="CTQ74942.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="500" mass="52636" checksum="A682C175EE45EE9E" modified="2015-12-09" version="1">MASFFVPSTGQQALTFDDVLLIPGHSEVMPGDVDLRTKVTRELELNIPILSSAMDTVTEGRLAIAMAQAGGIGVIHRNLSLDQQAEEVRMVKKFESGMVVNPLVIGPDASLQDALDLMKRFGISGVPVVENGGAGGQVTGKLVGILTNRDVRFASNPDQKIRELMTSSNLVTVNENVKQDEAKRLLHQNRIEKLLVVDDAGNCTGLITVKDMEKAQLNPNASKDAQGRLRVAAATSVGEEGFARAERLIDAGVDMVVVDTAHGHSQKVLDQVNRVKKLSNSVQVLAGNVATAEGTKALIDAGADAVKVGIGPGSICTTRIVAGVGVPQLTAIIESVNEANKQGVPVVADGGIKFSGDLAKAIAAGAASVMVGSLLAGTEESPGEVYLHQGRSYKSYRGMGSVGAMARGSADRYFQAEVRDSLKLVPEGIEGQVPYKGMLGSVLHQLAGGLRAAMGYVGGKTIEDFQEKARFVQISGAGLRESHAHDVTITRESPNYPTNV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKL4</accession>
    <name>A0A0M7AKL4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">tRNA modification GTPase MnmE</fullName>
            <ecNumber evidence="6">3.6.-.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6 9" type="primary">mnmE</name>
        <name evidence="6" type="synonym">trmE</name>
        <name evidence="9" type="ORF">LAX5112_03774</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </cofactor>
        <text evidence="6">Binds 1 potassium ion per subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Homodimer. Heterotetramer of two MnmE and two MnmG subunits.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 6 7">Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="3.6.-.-" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74144.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673093.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03774"/>
    <dbReference type="EnsemblBacteria" id="CTQ74144">
        <property type="protein sequence ID" value="CTQ74144"/>
        <property type="gene ID" value="LAX5112_03774"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006400">
        <property type="term" value="P:tRNA modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd04164">
        <property type="entry name" value="trmE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.430">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1360.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00379">
        <property type="entry name" value="GTPase_MnmE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031168">
        <property type="entry name" value="G_TrmE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006073">
        <property type="entry name" value="GTP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018948">
        <property type="entry name" value="GTP-bd_TrmE_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004520">
        <property type="entry name" value="GTPase_MnmE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027368">
        <property type="entry name" value="MnmE_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025867">
        <property type="entry name" value="MnmE_helical"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005225">
        <property type="entry name" value="Small_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027266">
        <property type="entry name" value="TrmE/GcvT_dom1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01926">
        <property type="entry name" value="MMR_HSR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12631">
        <property type="entry name" value="MnmE_helical"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10396">
        <property type="entry name" value="TrmE_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00450">
        <property type="entry name" value="mnmE_trmE_thdF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00231">
        <property type="entry name" value="small_GTP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51709">
        <property type="entry name" value="G_TRME"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 6 7" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="6 9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-0460">Magnesium</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3 6 7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4 6" id="KW-0630">Potassium</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6 7" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="TrmE-type G" evidence="8">
        <location>
            <begin position="216"/>
            <end position="373"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="21"/>
        </location>
        <ligand>
            <name>(6S)-5-formyl-5,6,7,8-tetrahydrofolate</name>
            <dbReference type="ChEBI" id="CHEBI:57457"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="79"/>
        </location>
        <ligand>
            <name>(6S)-5-formyl-5,6,7,8-tetrahydrofolate</name>
            <dbReference type="ChEBI" id="CHEBI:57457"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="119"/>
        </location>
        <ligand>
            <name>(6S)-5-formyl-5,6,7,8-tetrahydrofolate</name>
            <dbReference type="ChEBI" id="CHEBI:57457"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="226"/>
            <end position="231"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="230"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="245"/>
            <end position="251"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="251"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="270"/>
            <end position="273"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="449"/>
        </location>
        <ligand>
            <name>(6S)-5-formyl-5,6,7,8-tetrahydrofolate</name>
            <dbReference type="ChEBI" id="CHEBI:57457"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00011043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022958"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00379"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003313"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51709"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ74144.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="449" mass="48812" checksum="E2FDFC12E9E0F291" modified="2015-12-09" version="1">MADTIYALSSGAVPSGVAVIRVSGPEVRTATEALCGRIPAPRKTMLSGLRDPASQEIIDEALVLFFEGPASFTGEDVVEFQCHGGRAVVAAMLRILGEFANCRPAEPGEFTRRAFDRGRMDLTEVEGLADLIAAETESQRKQAVRQMGGALGSLYEDWRKRLIHMRAMIEADFDFADEEDVPGSVADEVWKEAATLQSEVTRHLEQSRSGERLRSGLQVVLMGAPNAGKSSLLNAIAGRDVAIVTEEAGTTRDVIEVHLDLGGYPVTLVDTAGLRETDGIVEREGIRRAEERGRQADLVLWAVEPGGVEPDHPQAGLPEDVADRVPVWTVRTKTDLETLPEQDSSGITEEIPASSKSDEGMKGLFDALTRFAEETIFVGEAPLATRARHRHYLNDCLSGLGQAVSSDHLPTELRAEDLRRAADSLGRITGRIDVEDLLDVIFRDFCIGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKT1</accession>
    <name>A0A0M7AKT1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative NAD(P)H nitroreductase</fullName>
            <ecNumber evidence="2">1.-.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04167</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.-.-.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75267.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673417.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04167"/>
    <dbReference type="EnsemblBacteria" id="CTQ75267">
        <property type="protein sequence ID" value="CTQ75267"/>
        <property type="gene ID" value="LAX5112_04167"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.109.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012825">
        <property type="entry name" value="BluB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029479">
        <property type="entry name" value="Nitroreductase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000415">
        <property type="entry name" value="Nitroreductase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00881">
        <property type="entry name" value="Nitroreductase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55469">
        <property type="entry name" value="SSF55469"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02476">
        <property type="entry name" value="BluB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nitroreductase" evidence="1">
        <location>
            <begin position="26"/>
            <end position="192"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00881"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75267.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="220" mass="24964" checksum="C848791C37FA6C94" modified="2015-12-09" version="1">MAASRSGETDKPAFSDEFRSEFESLLRWRRDVRRFRTDPIDPDKLKHLLELADLAPSVGNSQPWRIVTVQSAEKRASVVASFEAENAYAASAYEDEKAALYRQLKLAGLKEAPVHLAVFSEPNPDQGHGLGRATMPETLAYSTVSMIHTFWLAARTEGVGVGWVSILDPEKIGEILEVDPNWHFVAYLCVGYPEEEHIDPELERARWQVRSPLDERLFRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALM4</accession>
    <name>A0A0M7ALM4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Putative acyl-CoA dehydrogenase AidB</fullName>
            <ecNumber evidence="9">1.3.99.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">aidB_2</name>
        <name evidence="9" type="ORF">LAX5112_04441</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 5">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the acyl-CoA dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.3.99.-" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ76028.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673689.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000024.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04441"/>
    <dbReference type="EnsemblBacteria" id="CTQ76028">
        <property type="protein sequence ID" value="CTQ76028"/>
        <property type="gene ID" value="LAX5112_04441"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003995">
        <property type="term" value="F:acyl-CoA dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006089">
        <property type="entry name" value="Acyl-CoA_DH_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006091">
        <property type="entry name" value="Acyl-CoA_Oxase/DH_mid-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036250">
        <property type="entry name" value="AcylCo_DH-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009075">
        <property type="entry name" value="AcylCo_DH/oxidase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009100">
        <property type="entry name" value="AcylCoA_DH/oxidase_NM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041504">
        <property type="entry name" value="AidB_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00441">
        <property type="entry name" value="Acyl-CoA_dh_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02770">
        <property type="entry name" value="Acyl-CoA_dh_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18158">
        <property type="entry name" value="AidB_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47203">
        <property type="entry name" value="SSF47203"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56645">
        <property type="entry name" value="SSF56645"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00073">
        <property type="entry name" value="ACYL_COA_DH_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0274">FAD</keyword>
    <keyword evidence="3 5" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="5 9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AidB_N" evidence="8">
        <location>
            <begin position="22"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="domain" description="Acyl-CoA_dh_M" evidence="7">
        <location>
            <begin position="192"/>
            <end position="289"/>
        </location>
    </feature>
    <feature type="domain" description="Acyl-CoA_dh_1" evidence="6">
        <location>
            <begin position="304"/>
            <end position="458"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009347"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU362125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00441"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF02770"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF18158"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ76028.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="596" mass="65303" checksum="DCC0C324DAB7AD0C" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALW5</accession>
    <name>A0A0M7ALW5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 7">dTDP-4-dehydrorhamnose 3,5-epimerase</fullName>
            <ecNumber evidence="3 7">5.1.3.13</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Thymidine diphospho-4-keto-rhamnose 3,5-epimerase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8" type="primary">rfbC</name>
        <name evidence="8" type="ORF">LAX5112_04222</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2 7">Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>dTDP-4-dehydro-6-deoxy-alpha-D-glucose = dTDP-4-dehydro-beta-L-rhamnose</text>
            <dbReference type="Rhea" id="RHEA:16969"/>
            <dbReference type="ChEBI" id="CHEBI:57649"/>
            <dbReference type="ChEBI" id="CHEBI:62830"/>
            <dbReference type="EC" id="5.1.3.13"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="7">Carbohydrate biosynthesis; dTDP-L-rhamnose biosynthesis.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.</text>
    </comment>
    <dbReference type="EC" id="5.1.3.13" evidence="3 7"/>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75416.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673459.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000021.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04222"/>
    <dbReference type="EnsemblBacteria" id="CTQ75416">
        <property type="protein sequence ID" value="CTQ75416"/>
        <property type="gene ID" value="LAX5112_04222"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00124"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008830">
        <property type="term" value="F:dTDP-4-dehydrorhamnose 3,5-epimerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019305">
        <property type="term" value="P:dTDP-rhamnose biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000888">
        <property type="entry name" value="dTDP_sugar_isom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21047">
        <property type="entry name" value="PTHR21047"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00908">
        <property type="entry name" value="dTDP_sugar_isom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01221">
        <property type="entry name" value="rmlC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 8" id="KW-0413">Isomerase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" description="Proton acceptor" evidence="5">
        <location>
            <position position="56"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="5">
        <location>
            <position position="126"/>
        </location>
    </feature>
    <feature type="site" description="Participates in a stacking interaction with the thymidine ring of dTDP-4-oxo-6-deoxyglucose" evidence="6">
        <location>
            <position position="132"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001298"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001997"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00019595"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR600888-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR600888-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU364069"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ75416.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="192" mass="21132" checksum="6387EB5EFF3C1B92" modified="2015-12-09" version="1">MSGNVTLIHPRRFGDDRGWFTESYNKQKLEPLGITCDFVQDNHSLSVPAGTLRGLHFQTPPFAQDKLVRCIRGKIFDVAVDIRKGSPTYGKWIGVELSAENGDQLLVPAGYAHGFVTLEDNTEVTYKVSNYYSPQNDAGLMWNDGVIGIDWPLAAGSEPILSGKDTQHPGLADFDSPFAYDGTPMTLVEIEP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMA6</accession>
    <name>A0A0M7AMA6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">S-adenosylmethionine:tRNA ribosyltransferase-isomerase</fullName>
            <ecNumber evidence="5">2.4.99.17</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Queuosine biosynthesis protein QueA</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5 6" type="primary">queA</name>
        <name evidence="6" type="ORF">LAX5112_04032</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>7-aminomethyl-7-carbaguanosine(34) in tRNA + S-adenosyl-L-methionine = adenine + epoxyqueuosine(34) in tRNA + H(+) + L-methionine</text>
            <dbReference type="Rhea" id="RHEA:32155"/>
            <dbReference type="Rhea" id="RHEA-COMP:10342"/>
            <dbReference type="Rhea" id="RHEA-COMP:10346"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16708"/>
            <dbReference type="ChEBI" id="CHEBI:57844"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:82833"/>
            <dbReference type="ChEBI" id="CHEBI:82834"/>
            <dbReference type="EC" id="2.4.99.17"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="5">tRNA modification; tRNA-queuosine biosynthesis.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Monomer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the QueA family.</text>
    </comment>
    <dbReference type="EC" id="2.4.99.17" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ74913.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673323.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04032"/>
    <dbReference type="EnsemblBacteria" id="CTQ74913">
        <property type="protein sequence ID" value="CTQ74913"/>
        <property type="gene ID" value="LAX5112_04032"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00392"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051075">
        <property type="term" value="F:S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008616">
        <property type="term" value="P:queuosine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.10.240">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1780.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00113">
        <property type="entry name" value="QueA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003699">
        <property type="entry name" value="QueA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042118">
        <property type="entry name" value="QueA_dom1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042119">
        <property type="entry name" value="QueA_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036100">
        <property type="entry name" value="QueA_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30307">
        <property type="entry name" value="PTHR30307"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02547">
        <property type="entry name" value="Queuosine_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF111337">
        <property type="entry name" value="SSF111337"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00113">
        <property type="entry name" value="queA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="6" id="KW-0413">Isomerase</keyword>
    <keyword evidence="4 5" id="KW-0671">Queuosine biosynthesis</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 5" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="2 5 6" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022785"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00113"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ74913.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="360" mass="39328" checksum="C905DA838283250F" modified="2015-12-09" version="1">MRVDQFDFELPNERIALRPARPRDAARMLVVRPGETPELSDKGVRDLPALLEPGDALVFNDTKVIPAQLEGKRVRGDIEAGISVTLHLRSAADRWKAFVRPAKKLQVDDLVVFEGNGARLTATVKEKSDGGEVLLAFDCSGPDLDVAIAQVGHIPLPPYIAQKRGEDEQDRQDYQTIFAEKDGAVAAPTAGLHFTPELLASIEDRGIEMHRVTLHVGAGTFLPVKADDTDDHKMHAEWGEVSEETAAALQAVKARGNKVVSIGTTSLRILESAAQETGTIVPFTDETSIFITPGYQFKAIDALMTNFHLPRSTLFMLVSALSGLETMRAAYQHAIDTEYRFYSYGDASLLFPDASQDASS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AN89</accession>
    <name>A0A0M7AN89_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DMSO reductase anchor subunit (DmsC)</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04476</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ76127.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673674.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000024.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04476"/>
    <dbReference type="EnsemblBacteria" id="CTQ76127">
        <property type="protein sequence ID" value="CTQ76127"/>
        <property type="gene ID" value="LAX5112_04476"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019645">
        <property type="term" value="P:anaerobic electron transport chain"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007059">
        <property type="entry name" value="DmsC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38095">
        <property type="entry name" value="PTHR38095"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04976">
        <property type="entry name" value="DmsC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="37"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="80"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="106"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="138"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="162"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="232"/>
            <end position="251"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="257"/>
            <end position="276"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76127.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="291" mass="31339" checksum="6BE16ED4E996A2F5" modified="2015-12-09" version="1">MHPAPSVIIFTVLSGLGFGFLAWLGLGLPAVTGWTAFFAYLLGFALAVGGLLSATFHLGNPQRSLLAFTQWRSSWLSREAWLSVLALVFMGIHGFAAVFFDLTLAPIGVTGALLCVATVYATAMIYAQLATVPRWNHFLTPLHLVSLSLAGGAILAGQGLGAVLLLAIAGLVQSLYWIFGDRRFAQRGHTMETATGLGERGKVRLFEPPHTGTNYLLKEMVFTVGRKHAQKLRIIAFALNCVLPIVLIALLPASLPVVAVAGITFLIGTFASRWLFFAEAEHVVGLYYGKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AN97</accession>
    <name>A0A0M7AN97_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">V-type ATP synthase subunit D</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">LAX5112_04431</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the V-ATPase D subunit family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ76001.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673644.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000024.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04431"/>
    <dbReference type="EnsemblBacteria" id="CTQ76001">
        <property type="protein sequence ID" value="CTQ76001"/>
        <property type="gene ID" value="LAX5112_04431"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046961">
        <property type="term" value="F:proton-transporting ATPase activity, rotational mechanism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002699">
        <property type="entry name" value="V_ATPase_D"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01813">
        <property type="entry name" value="ATP-synt_D"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00309">
        <property type="entry name" value="V_ATPase_subD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0406">Ion transport</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="coiled-coil region" evidence="4">
        <location>
            <begin position="127"/>
            <end position="183"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ76001.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="207" mass="23509" checksum="E287A802AE4B218D" modified="2015-12-09" version="1">MAKLALNKSSLARESAHLSEYKRFLPSLELKRLQIMAERAKAKETSLRLDAEYERRFDEIAKSLPMLANEQVPVEGIVTLKSVERGEQNLSGTRLPTLDNIEVDVKPYSLLARPHWVDPAVNGLKELLRLHLEREVARERIEKLIEAEAVISRRVNLFEKVLIPQAQKNIKKIRMALADAERDAVVRAKISKRKTAARSAVKGMAEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANR6</accession>
    <name>A0A0M7ANR6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Histidinol dehydrogenase</fullName>
            <shortName evidence="4">HDH</shortName>
            <ecNumber evidence="4">1.1.1.23</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4 11" type="primary">hisD</name>
        <name evidence="11" type="ORF">LAX5112_04497</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Catalyzes the sequential NAD-dependent oxidations of L-histidinol to L-histidinaldehyde and then to L-histidine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>H2O + L-histidinol + 2 NAD(+) = 3 H(+) + L-histidine + 2 NADH</text>
            <dbReference type="Rhea" id="RHEA:20641"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57595"/>
            <dbReference type="ChEBI" id="CHEBI:57699"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="EC" id="1.1.1.23"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="4 9">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="4 9">Binds 1 zinc ion per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="4">Amino-acid biosynthesis; L-histidine biosynthesis; L-histidine from 5-phospho-alpha-D-ribose 1-diphosphate: step 9/9.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4 5 10">Belongs to the histidinol dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.23" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000025">
        <property type="protein sequence ID" value="CTQ76171.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04497"/>
    <dbReference type="EnsemblBacteria" id="CTQ76171">
        <property type="protein sequence ID" value="CTQ76171"/>
        <property type="gene ID" value="LAX5112_04497"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00031">
        <property type="reaction ID" value="UER00014"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004399">
        <property type="term" value="F:histidinol dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000105">
        <property type="term" value="P:histidine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd06572">
        <property type="entry name" value="Histidinol_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01024">
        <property type="entry name" value="HisD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016161">
        <property type="entry name" value="Ald_DH/histidinol_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001692">
        <property type="entry name" value="Histidinol_DH_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022695">
        <property type="entry name" value="Histidinol_DH_monofunct"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012131">
        <property type="entry name" value="Hstdl_DH"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21256">
        <property type="entry name" value="PTHR21256"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00815">
        <property type="entry name" value="Histidinol_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000099">
        <property type="entry name" value="Histidinol_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00083">
        <property type="entry name" value="HOLDHDRGNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53720">
        <property type="entry name" value="SSF53720"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00069">
        <property type="entry name" value="hisD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00611">
        <property type="entry name" value="HISOL_DEHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="4" id="KW-0368">Histidine biosynthesis</keyword>
    <keyword evidence="1 4 9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4 7" id="KW-0520">NAD</keyword>
    <keyword evidence="3 4 5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4 9" id="KW-0862">Zinc</keyword>
    <feature type="active site" description="Proton acceptor" evidence="4 6">
        <location>
            <position position="332"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="4 6">
        <location>
            <position position="333"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4 7">
        <location>
            <position position="135"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4 7">
        <location>
            <position position="196"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4 7">
        <location>
            <position position="219"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4 8">
        <location>
            <position position="242"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4 8 9">
        <location>
            <position position="264"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4 8 9">
        <location>
            <position position="267"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4 8">
        <location>
            <position position="333"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4 8 9">
        <location>
            <position position="366"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4 8">
        <location>
            <position position="420"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4 8 9">
        <location>
            <position position="425"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01024"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRNR" id="PIRNR000099"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR000099-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR000099-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR000099-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR000099-4"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU004175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ76171.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="435" mass="46413" checksum="CE923BBC4D7C5DD9" modified="2015-12-09" version="1">MESCVVLRLTNTSADFEARFAELLAGKREASEDVDQIVRDILEDVRKRGDQAVLEYTAKFDRLNAVEMGDLKVSAEQIEAALTEVPAETLDALQLAHDRIYSHHKRQLPADDRYTDPIGVELGSRWTAVEAVGVYVPGGLASYPSSVLMNVVPAKVAGVERIVMVVPSPDDVLNPLVLAAAKIAGVSEIYRIGGAQAVAALAFGTQTIKPVAKIVGPGNAFVAAAKRRVFGTVGIDMIAGPSEVLVVADKDSNPDWIAADLLAQAEHDPVAQSILITDDAELADHVAGAVERQLKTLPREEVARASWQDFGAIILVDSLDNAMPLANRLAPEHLELAVEDPEQLLDKVRNAGAVFMGHHTPEAIGDYVGGSNHVLPTARSARFSSGLSVLEFVKRTSILKCNAENLRALGPAAIALGEAEGLSAHARSVSIRLNM</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQP2</accession>
    <name>A0A0M7AQP2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04692</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000028">
        <property type="protein sequence ID" value="CTQ76736.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76736">
        <property type="protein sequence ID" value="CTQ76736"/>
        <property type="gene ID" value="LAX5112_04692"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002514">
        <property type="entry name" value="Transposase_8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010921">
        <property type="entry name" value="Trp_repressor/repl_initiator"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01527">
        <property type="entry name" value="HTH_Tnp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48295">
        <property type="entry name" value="SSF48295"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ76736.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="102" mass="11186" checksum="3FC0C0D87ECD5DCF" modified="2015-12-09" version="1">MTKRKRYTAEFKAKVALEAIREEMTMAELAKKYGIHPTMISGWKKAAIENMASAFGGSQSNEPAISEKEVEKLHAKIGQLVVERDFLSQASSLLTGAGGKTR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQS5</accession>
    <name>A0A0M7AQS5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Sulfotransferase domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04924</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000035">
        <property type="protein sequence ID" value="CTQ77488.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674067.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000035.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77488">
        <property type="protein sequence ID" value="CTQ77488"/>
        <property type="gene ID" value="LAX5112_04924"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="366"/>
            <end position="385"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77488.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="412" mass="45814" checksum="C325937881FE234D" modified="2015-12-09" version="1">MFSTTVRKLKLHLPEGFQHELRLPAKDVQRPGNALLIRGHVIGDGPSEAQLQVAASSQPLRSWPVEVTEVNGRKRYDLSAVINLLGSPEKTLVSFQLVGDNNWRTPVATAELQRRNATDAVECMPGIFVVSLGRSGSTMLMSALAAHQQVVAYERHPLETRISQQYARIAKTLTEPADFFDPELEAFAHTGKVASNAYLRPDGDIIDLMDNTLGNQNIVHCQQQVTSFYRGLAARRQKTASMFAEKCIPHMAWLNLLKDLYPGSRVVLLVRDFRDVYRSVLAFNARRGFNAFGRESVANDVDYIDALARSASALMAVAKEDGVELIKYEDIATRPKETFSGFLETLGLEASLTNLDLMVAALNKETPESKRHRTASSSEQSVGRWHKETSAAEVARFQEHLKPALEFFGYGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARA9</accession>
    <name>A0A0M7ARA9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">3-oxoadipate enol-lactonase 2</fullName>
            <ecNumber evidence="2">3.1.1.24</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">catD_2</name>
        <name evidence="2" type="ORF">LAX5112_04829</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.1.24" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000032">
        <property type="protein sequence ID" value="CTQ77187.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673985.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000032.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04829"/>
    <dbReference type="EnsemblBacteria" id="CTQ77187">
        <property type="protein sequence ID" value="CTQ77187"/>
        <property type="gene ID" value="LAX5112_04829"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047570">
        <property type="term" value="F:3-oxoadipate enol-lactonase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000073">
        <property type="entry name" value="AB_hydrolase_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12697">
        <property type="entry name" value="Abhydrolase_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00111">
        <property type="entry name" value="ABHYDROLASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AB hydrolase-1" evidence="1">
        <location>
            <begin position="34"/>
            <end position="220"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12697"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77187.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="231" mass="25812" checksum="5993A8B01A5EBCDB" modified="2015-12-09" version="1">MCDPILFVPGLLCTEALYAPQIVAFADRPIMVANHREHDRIEAIAADILKQAPERFSLIGLSMGGYIAMEIMREAPERVSKLALLDTNARADTPEQTERREFLIKLARERSFEKVPELLFPGFVHERRQDDHDLKQIVVEMASDTGPEAFVRQQTALIHRPDARPRLHEISCPSLVLVGDGDTLTPPELAHEIHSLIPESELAVIEGSGHLSTLEKPDEVTGALRSFLKNT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARI7</accession>
    <name>A0A0M7ARI7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Elongation factor G</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">fusA_2</name>
        <name evidence="8" type="ORF">LAX5112_04728</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000029">
        <property type="protein sequence ID" value="CTQ76860.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673900.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000029.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04728"/>
    <dbReference type="EnsemblBacteria" id="CTQ76860">
        <property type="protein sequence ID" value="CTQ76860"/>
        <property type="gene ID" value="LAX5112_04728"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003746">
        <property type="term" value="F:translation elongation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01434">
        <property type="entry name" value="EFG_mtEFG1_IV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd03713">
        <property type="entry name" value="EFG_mtEFG_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041095">
        <property type="entry name" value="EFG_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035647">
        <property type="entry name" value="EFG_III/V"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035649">
        <property type="entry name" value="EFG_V"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000640">
        <property type="entry name" value="EFG_V-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014721">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold_subgr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000795">
        <property type="entry name" value="T_Tr_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009000">
        <property type="entry name" value="Transl_B-barrel_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005517">
        <property type="entry name" value="Transl_elong_EFG/EF2_IV"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00679">
        <property type="entry name" value="EFG_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14492">
        <property type="entry name" value="EFG_III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03764">
        <property type="entry name" value="EFG_IV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00009">
        <property type="entry name" value="GTP_EFTU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00838">
        <property type="entry name" value="EFG_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00889">
        <property type="entry name" value="EFG_IV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50447">
        <property type="entry name" value="SSF50447"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="SSF54211"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54980">
        <property type="entry name" value="SSF54980"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51722">
        <property type="entry name" value="G_TR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0251">Elongation factor</keyword>
    <keyword evidence="5" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tr-type G" evidence="7">
        <location>
            <begin position="14"/>
            <end position="300"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005870"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00017872"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00024731"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ76860.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="687" mass="73458" checksum="E121D721AA3FBCE1" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AS30</accession>
    <name>A0A0M7AS30_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Putative acetyl-CoA C-acetyltransferase YhfS</fullName>
            <ecNumber evidence="5">2.3.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">yhfS</name>
        <name evidence="5" type="ORF">LAX5112_04788</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the thiolase-like superfamily. Thiolase family.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.-" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000031">
        <property type="protein sequence ID" value="CTQ77060.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673952.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000031.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04788"/>
    <dbReference type="EnsemblBacteria" id="CTQ77060">
        <property type="protein sequence ID" value="CTQ77060"/>
        <property type="gene ID" value="LAX5112_04788"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016747">
        <property type="term" value="F:acyltransferase activity, transferring groups other than amino-acyl groups"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00751">
        <property type="entry name" value="thiolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.47.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002155">
        <property type="entry name" value="Thiolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016039">
        <property type="entry name" value="Thiolase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020617">
        <property type="entry name" value="Thiolase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020613">
        <property type="entry name" value="Thiolase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020616">
        <property type="entry name" value="Thiolase_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02803">
        <property type="entry name" value="Thiolase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00108">
        <property type="entry name" value="Thiolase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000429">
        <property type="entry name" value="Ac-CoA_Ac_transf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53901">
        <property type="entry name" value="SSF53901"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01930">
        <property type="entry name" value="AcCoA-C-Actrans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00737">
        <property type="entry name" value="THIOLASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 5" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Thiolase_N" evidence="3">
        <location>
            <begin position="6"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="domain" description="Thiolase_C" evidence="4">
        <location>
            <begin position="261"/>
            <end position="380"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU003557"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00108"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF02803"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ77060.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="384" mass="39631" checksum="60CEDE865AC3548D" modified="2015-12-09" version="1">MTGRAVIAAARRTPVAPRGGGLKDLQADELAAPVFSKLLDDAGVPGGMVDQVFLGNALYAGGNPARMAALRAGLPPAVSAMTIDTQCCSGLDAIIQGARLIEAGAARCVIAGGAESYSRAPVRMHRPKAADKEPVAYTRPAFAPPPFDDPDLSEAAARLAARFEIGREDQAAFAVHSHEKALAVKNSKKLVVCPRTDLADDSFTRTLSIRAAMRAPVLFGDPETGLSAATIACAADGAAGVLIMSEGMARERGLSGLRILNSGSLGGDPANPALVPIEMARQLLPQTTYTVADINAVELHEAYAVQALAAVDALGIPSDILNPFGGGLARGHPIGASGAVLMVQLHEHWYTQRTQGYPENYKAMALIAAAGGLAAGVLVEAFEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AS35</accession>
    <name>A0A0M7AS35_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04873</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000033">
        <property type="protein sequence ID" value="CTQ77321.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674020.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000033.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77321">
        <property type="protein sequence ID" value="CTQ77321"/>
        <property type="gene ID" value="LAX5112_04873"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="42"/>
            <end position="63"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77321.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="73" mass="8264" checksum="FD0F238491DDCD34" modified="2015-12-09" version="1">MQTAEFLIELGRYYLYAGGIVAALFLVIGIDRIEPSANGSYAFRPLLIPGICLIWPLVLYRWVVLERTKGHKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASH2</accession>
    <name>A0A0M7ASH2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Isochorismatase family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04898</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000034">
        <property type="protein sequence ID" value="CTQ77402.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04898"/>
    <dbReference type="EnsemblBacteria" id="CTQ77402">
        <property type="protein sequence ID" value="CTQ77402"/>
        <property type="gene ID" value="LAX5112_04898"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.850">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000868">
        <property type="entry name" value="Isochorismatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036380">
        <property type="entry name" value="Isochorismatase-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00857">
        <property type="entry name" value="Isochorismatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52499">
        <property type="entry name" value="SSF52499"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Isochorismatase" evidence="1">
        <location>
            <begin position="15"/>
            <end position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77402.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="203" mass="21641" checksum="CD4E896D63F56D6E" modified="2015-12-09" version="1">MNLTNPAPLTSDNAAVVFVDNQVGLMTGIRDYSIADLKHNIVGLAKAAKALGLPIVTTTTSSETLWGPAIPELQEALPDQTFIDRTTVNAWDDPRVEEAIRATGRSKLIFAGLSLEVCAAFPAMRAVREGFEAYIAVDASGTFNMTKRETALHRLTQAGVVIADGASLMIEILADNANEQAGDVYSALGMDWSILVGQVRAHA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZNC8</accession>
    <name>A0A0M6ZNC8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Zn_protease domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00029</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63676.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00029"/>
    <dbReference type="EnsemblBacteria" id="CTQ63676">
        <property type="protein sequence ID" value="CTQ63676"/>
        <property type="gene ID" value="LAX5112_00029"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.70.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021109">
        <property type="entry name" value="Peptidase_aspartic_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008503">
        <property type="entry name" value="Put_Zn_protease"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05618">
        <property type="entry name" value="Zn_protease"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50630">
        <property type="entry name" value="SSF50630"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Zn_protease" evidence="1">
        <location>
            <begin position="22"/>
            <end position="156"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF05618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ63676.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="158" mass="18217" checksum="DEDCA1D667F9CE5D" modified="2015-12-09" version="1">MDEMTDKADPDRLKRKERPFTIIGWMERVSLPDLDLFGVKAKIDTGARTSALHVSEIEHFEQNGEPWVRFLTLDAEGQGDHYATAKIHSDRWIKNTSGIPEERIIIRTRARFGKRTWTIDISLSDRTNMTFPMIVGRSALKNHAIAVHTRRAYLISEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZNJ8</accession>
    <name>A0A0M6ZNJ8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">HTH-type transcriptional repressor NemR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">nemR</name>
        <name evidence="3" type="ORF">LAX5112_00264</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64345.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ64345">
        <property type="protein sequence ID" value="CTQ64345"/>
        <property type="gene ID" value="LAX5112_00264"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036271">
        <property type="entry name" value="Tet_transcr_reg_TetR-rel_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00440">
        <property type="entry name" value="TetR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00455">
        <property type="entry name" value="HTHTETR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48498">
        <property type="entry name" value="SSF48498"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50977">
        <property type="entry name" value="HTH_TETR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH tetR-type" evidence="2">
        <location>
            <begin position="32"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="1">
        <location>
            <begin position="55"/>
            <end position="74"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ64345.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="209" mass="22867" checksum="1E3BAB5168151EDF" modified="2015-12-09" version="1">MIVFVIVNKKIMTIINVVHGDIQMRVSREDARENRARVVETASQLFRQHGFDGIGIAGLMKASGLTNGAFYKQFASKDALMAEATSHALTENLDHWRRSVAEDASGSPEDTIAHWYLSETHESARGTGCAYAALAGDAPRQTKEVRQAFDEALRETAALVSGKDETTPLSEQEDAFKFISQMVGALVLARATEDPELKTALLNAARKTE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZNM8</accession>
    <name>A0A0M6ZNM8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">UDP-2,3-diacylglucosamine hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_00275</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64375.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670255.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00275"/>
    <dbReference type="EnsemblBacteria" id="CTQ64375">
        <property type="protein sequence ID" value="CTQ64375"/>
        <property type="gene ID" value="LAX5112_00275"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.21.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004843">
        <property type="entry name" value="Calcineurin-like_PHP_ApaH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043461">
        <property type="entry name" value="LpxH-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029052">
        <property type="entry name" value="Metallo-depent_PP-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34990">
        <property type="entry name" value="PTHR34990"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00149">
        <property type="entry name" value="Metallophos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56300">
        <property type="entry name" value="SSF56300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Metallophos" evidence="2">
        <location>
            <begin position="39"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="282"/>
            <end position="308"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00149"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ64375.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="308" mass="35243" checksum="8A601C3B395935D1" modified="2015-12-09" version="1">MHPRLAQVRIPENTLQSRFPGDRLIRKHTADTENRIRHLRTLFLSDIHLGTRGCQADVLLDFLSLHHADTIYLVGDIIDGWRLKRKRYWPENHQAVIDELLARGRAGIKITYLPGNHDEFLKDTQPLRFGCVEFMETAEFETAAGDMYLVLHGDQYDLIVQKAKWLAFLGDRFYAFALWTNTWVNNVRRKFGLNYWSLGAFAKQHVKQFVNVISAFEGEVTKDIKDRGLDGVICGHIHHATDQEMNGKRYLNTGDWVESCTAIVETHDGVLEIVRWRDSGAHPDAGNSDGKRALKPAGKLERERTVAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZNV5</accession>
    <name>A0A0M6ZNV5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">ABC-type uncharacterized transport system, permease component</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_00300</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64445.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670277.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00300"/>
    <dbReference type="EnsemblBacteria" id="CTQ64445">
        <property type="protein sequence ID" value="CTQ64445"/>
        <property type="gene ID" value="LAX5112_00300"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001851">
        <property type="entry name" value="ABC_transp_permease"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02653">
        <property type="entry name" value="BPD_transp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="29"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="58"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="90"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="139"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="186"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="220"/>
            <end position="245"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="265"/>
            <end position="283"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ64445.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="304" mass="31599" checksum="D2F989179A607AAA" modified="2015-12-09" version="1">MFEAVLLTVITAATPLLIAAIGELVVERSGVLNLGVEGMMIMGAVIGFAVANQTGSGTLGVVGAIAAGMAMSALFGFLVLVLVANQVATGLALTILGLGLSGMIGEAYIGVPGLRIPELYIPILSDIPFIGPVFFQQDAIVYIGFALVIGVAYFLFRTRAGLILRSVGDNHGSAHALGYSVLKIRFMAVLFGGACAGLAGAYMSLAYTPQWVENMTAGRGWIALALVVFASWLPFRVIIGAYLFGAVSVLNLHAQAIGLGVPSQFLSSLPYLATIGVLVLISANRRLTLVNTPACLGKPFVPDR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZNX2</accession>
    <name>A0A0M6ZNX2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Ornithine cyclodeaminase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00073</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ornithine cyclodeaminase/mu-crystallin family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63810.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670122.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00073"/>
    <dbReference type="EnsemblBacteria" id="CTQ63810">
        <property type="protein sequence ID" value="CTQ63810"/>
        <property type="gene ID" value="LAX5112_00073"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1780.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003462">
        <property type="entry name" value="ODC_Mu_crystall"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023401">
        <property type="entry name" value="ODC_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13812">
        <property type="entry name" value="PTHR13812"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02423">
        <property type="entry name" value="OCD_Mu_crystall"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001439">
        <property type="entry name" value="CryM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008903"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ63810.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="314" mass="33233" checksum="5A8808815859E261" modified="2015-12-09" version="1">MLLLSEDQTRHALPFPALIDALEEIFRSGCVMPTRHHHDMEMSGEPDATMLLMPAWVPGEYAGVKVVNVMPGNSARGLPAVAAQYLLSSAKTGEMLALIDGGELTARRTAAASALAAKYLAREDAGHLLIVGTGRLAPNLVAAHMAVRPIKQVTIWGRSKEKAADLARHVGATYPVSVTVAGHLEDVLGKADIISAATLSNEPLIKGALVKPGAHVDLVGAFKPSMRESDDDLVQRADLYVDTRDGCLVEGGDVVQPLQAGVIRAQDVKADLYDLCRGTHPGRQSDDAVTFFKSVGAALEDLAGAMLAYKTASK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZP86</accession>
    <name>A0A0M6ZP86_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Sel1 repeat</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00161</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64051.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00161"/>
    <dbReference type="EnsemblBacteria" id="CTQ64051">
        <property type="protein sequence ID" value="CTQ64051"/>
        <property type="gene ID" value="LAX5112_00161"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006597">
        <property type="entry name" value="Sel1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08238">
        <property type="entry name" value="Sel1"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SMART" id="SM00671">
        <property type="entry name" value="SEL1"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809002" evidence="1">
        <location>
            <begin position="36"/>
            <end position="288"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64051.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="288" mass="31447" checksum="A602CDBCEBDBF116" modified="2015-12-09" version="1">MNGMYSKKTHRQHLSVGGAIIGALALMMATVPSQAFDGQPAAPGPINPSTMSPNEALRTGARQYYSGDKTAAISSLKYAAENGQTMAAWKLGDMYAKGDGVQEDDYKAFQYYSQIVRDHGNDSPDSPDAPFVSSAFVALGSYYLSGIDGTVIKDEGQARRIFTHAASYYGDAAAQFHLGEMYRETNSRMAVRWYNLAALKGHVGAQAKLGETLYSLGSSDKKKARGLMWLTVARKQATGQDTTWINNLHEQYFAVAPEPVRAQARSLAETWIENNRPDMLTAQQVPTQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQN1</accession>
    <name>A0A0M6ZQN1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7 16">Homoserine dehydrogenase</fullName>
            <ecNumber evidence="6 16">1.1.1.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="19" type="primary">hom</name>
        <name evidence="19" type="ORF">LAX5112_00047</name>
    </gene>
    <organism evidence="19 20">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="20" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="20">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>L-homoserine + NAD(+) = H(+) + L-aspartate 4-semialdehyde + NADH</text>
            <dbReference type="Rhea" id="RHEA:15757"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57476"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:537519"/>
            <dbReference type="EC" id="1.1.1.3"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 16">
            <text>L-homoserine + NADP(+) = H(+) + L-aspartate 4-semialdehyde + NADPH</text>
            <dbReference type="Rhea" id="RHEA:15761"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57476"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="ChEBI" id="CHEBI:537519"/>
            <dbReference type="EC" id="1.1.1.3"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="4 16">Amino-acid biosynthesis; L-methionine biosynthesis via de novo pathway; L-homoserine from L-aspartate: step 3/3.</text>
    </comment>
    <comment type="pathway">
        <text evidence="3 16">Amino-acid biosynthesis; L-threonine biosynthesis; L-threonine from L-aspartate: step 3/5.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5 17">Belongs to the homoserine dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.3" evidence="6 16"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63733.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670108.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00047"/>
    <dbReference type="EnsemblBacteria" id="CTQ63733">
        <property type="protein sequence ID" value="CTQ63733"/>
        <property type="gene ID" value="LAX5112_00047"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00050">
        <property type="reaction ID" value="UER00063"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00051">
        <property type="reaction ID" value="UER00465"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004412">
        <property type="term" value="F:homoserine dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050661">
        <property type="term" value="F:NADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009097">
        <property type="term" value="P:isoleucine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009086">
        <property type="term" value="P:methionine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009088">
        <property type="term" value="P:threonine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045865">
        <property type="entry name" value="ACT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002912">
        <property type="entry name" value="ACT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005106">
        <property type="entry name" value="Asp/hSer_DH_NAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016204">
        <property type="entry name" value="HDH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001342">
        <property type="entry name" value="HDH_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019811">
        <property type="entry name" value="HDH_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01842">
        <property type="entry name" value="ACT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00742">
        <property type="entry name" value="Homoserine_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03447">
        <property type="entry name" value="NAD_binding_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000098">
        <property type="entry name" value="Homoser_dehydrog"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55021">
        <property type="entry name" value="SSF55021"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51671">
        <property type="entry name" value="ACT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01042">
        <property type="entry name" value="HOMOSER_DHGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 16" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="16" id="KW-0100">Branched-chain amino acid biosynthesis</keyword>
    <keyword evidence="9 16" id="KW-0412">Isoleucine biosynthesis</keyword>
    <keyword evidence="13 16" id="KW-0486">Methionine biosynthesis</keyword>
    <keyword evidence="11 15 16" id="KW-0521">NADP</keyword>
    <keyword evidence="12 16 19" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="20" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10 16" id="KW-0791">Threonine biosynthesis</keyword>
    <feature type="domain" description="ACT" evidence="18">
        <location>
            <begin position="351"/>
            <end position="434"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="14">
        <location>
            <position position="207"/>
        </location>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <begin position="10"/>
            <end position="17"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="107"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="192"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000116"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001406"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005056"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00005062"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00006753"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00013213"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00013376"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022624"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022697"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="PIRSR" id="PIRSR000098-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="PIRSR" id="PIRSR000098-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="RuleBase" id="RU000579"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="RuleBase" id="RU004171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="18">
        <source>
            <dbReference type="PROSITE" id="PS51671"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="EMBL" id="CTQ63733.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="439" mass="46729" checksum="42945CF8A8392051" modified="2015-12-09" version="1">MADALKIGVAGLGTVGASVVQLLEKHAGQIERRTGRSLTVTAVSARNRTRDRGIDTSGFTWFDDPLTMVKEAELDIFVELIGGEDGPAEQSVRAALSRGVHVVTANKALIAKHGVDLARVAEENNACLNYEAAVAGGIPIVKTMRESLAGNEVSRVYGILNGTCNYILTRMEAEGISFEDCLADAQRLGYAEADPTFDIEGNDTAHKLAILTSLAFGTEIDADSIFMEGITSITTADIQAADELGFRIKLLGVAQRTDTGIEQRVHPTMVPKSSAIARIDGVLNAVAVDGDYVGEIVLVGPGAGGNATASSVVADITDIARGDQTPVLGMPATDLVPYERARMRLHEGGYYIRLSVYDRPGAFGEIARCMGDAGISLESIVQKRAAAEDRDRDSADAPQPVILITYETTEIAIKEALDVVMSKGVVAEQPQMIRIEKLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQR9</accession>
    <name>A0A0M6ZQR9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00330</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64592.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00330"/>
    <dbReference type="EnsemblBacteria" id="CTQ64592">
        <property type="protein sequence ID" value="CTQ64592"/>
        <property type="gene ID" value="LAX5112_00330"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021323">
        <property type="entry name" value="DUF2927"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11150">
        <property type="entry name" value="DUF2927"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809040" evidence="1">
        <location>
            <begin position="23"/>
            <end position="238"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64592.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="238" mass="27606" checksum="EF6DA41444504E69" modified="2015-12-09" version="1">MMHKILIFMAMLALSAGMPSRASSEAFTTEDIMFGFEQTVFGLEHRSWGWRPYLVKKFTTPVRFYIHNLARRDRTATVRRFVREIDRRVSGLSATVVRQPADANFEIYVVDRKQYKPVVRTDIYKNPKAKVPGRCLVRVISGRNGIKRSAAVIVSDEGEFLFQRCLVEEVLQGLGPMNDNHKLVHSVFNDSSRHNRFTVFDQIILNMLYDPRIKPGMSVKQTQDFLLQIARDARRRVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRA2</accession>
    <name>A0A0M6ZRA2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Urea ABC transporter, permease protein UrtB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_00564</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65258.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008189758.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00564"/>
    <dbReference type="EnsemblBacteria" id="CTQ65258">
        <property type="protein sequence ID" value="CTQ65258"/>
        <property type="gene ID" value="LAX5112_00564"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001851">
        <property type="entry name" value="ABC_transp_permease"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02653">
        <property type="entry name" value="BPD_transp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="64"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="90"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="157"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="206"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="286"/>
            <end position="305"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ65258.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="322" mass="33932" checksum="5EF9F9C31C27E031" modified="2015-12-09" version="1">MFETLILTLDSTVRLSTPLLLACLAGLYSERSGIVDIGLEGKMLGAAFGAGAVAYITGNAWIGLMAGIAVSIGLALIHGFASITNRGNQIVSGVAINFLAAGLTALLGQTWFSQGGRTPSLQGDGRFRNIVLPGAEQVRDVPIIGPIYAELLSGHNILVYAAFVAVPITWWVLFRTRFGLRLRAVGENPAAVDTAGISVTWLRYRAVIACGILCGLAGSYLSIAQSAGFIKDMTAGKGFIALAALIFAKWRPASAMFACLLFGFLDATAIRMQGQEVPGIGEIPVQFFQALPYILTVILLAGFIGKAIPPKAAGIPYLKERS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRW7</accession>
    <name>A0A0M6ZRW7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Hca operon transcriptional activator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">hcaR_1</name>
        <name evidence="3" type="ORF">LAX5112_00501</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65077.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670452.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00501"/>
    <dbReference type="EnsemblBacteria" id="CTQ65077">
        <property type="protein sequence ID" value="CTQ65077"/>
        <property type="gene ID" value="LAX5112_00501"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00039">
        <property type="entry name" value="HTHLYSR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="16"/>
            <end position="73"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ65077.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="321" mass="35889" checksum="DCD546967C2C5CF8" modified="2015-12-09" version="1">MSEAAPMNADRLARELDWNLLRTFIVLAKAGSVTAAADQLRLKQPTVSSALKRLEDRIGRKLIHRKPGQFELTEAGTLLLKEAIEIQGAILRLGTLMRDVTDEVRGHVEIAMASHVVSPLFDQTLRVFHETHPAATLSINISASKQALEAVTTRRASLAVCLVRERSPKLEYARLFREYFGLFCGPPHPLFGRRDLSKSDLAGQSAVSFVTDRLEDALRPVTLMRAEADLEDRVVGTSANLEEVRRMIIAGLGIGPLPIHVVKRDVRDGLLWQLPPYEGLPEIGVHVVWNPKAKLNRAEKALLEILLERIRDTPIDQRTYR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZS53</accession>
    <name>A0A0M6ZS53_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Soluble epoxide hydrolase</fullName>
            <ecNumber evidence="2">3.3.2.10</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00267</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.3.2.10" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64354.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670249.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ64354">
        <property type="protein sequence ID" value="CTQ64354"/>
        <property type="gene ID" value="LAX5112_00267"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004301">
        <property type="term" value="F:epoxide hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000073">
        <property type="entry name" value="AB_hydrolase_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000639">
        <property type="entry name" value="Epox_hydrolase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00561">
        <property type="entry name" value="Abhydrolase_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00111">
        <property type="entry name" value="ABHYDROLASE"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00412">
        <property type="entry name" value="EPOXHYDRLASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AB hydrolase-1" evidence="1">
        <location>
            <begin position="38"/>
            <end position="272"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00561"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64354.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="289" mass="32494" checksum="BC02D736B9B2C5BE" modified="2015-12-09" version="1">MSPVNNEARLAAFEGRVSHHFTDNNGTKVHFASAGEGPLVVFIHGFPDHWLTWWQQMDVLSKTHRTVAMDLRGFNLSDHPEDQSAYTPETLASDVCAVIDACGERDAVVIGHDWGGFVAWQTAMLFPDRVQRLGIVNLPHPWAIARELANNPDQQKASGYARVFQQPGSESKLDFDRLSTWINDPAFRARHMAAMERSNRTGMLNYYRVCFPAEPYTERTDTPPPIKMPVLVVHGTEDPYVLTAGHNNLWEYVKGSLTIRAWSGVGHFVQHDAPDRLTAAFKSWIGETI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSZ9</accession>
    <name>A0A0M6ZSZ9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Patatin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_00595</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65346.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670522.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00595"/>
    <dbReference type="EnsemblBacteria" id="CTQ65346">
        <property type="protein sequence ID" value="CTQ65346"/>
        <property type="gene ID" value="LAX5112_00595"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016042">
        <property type="term" value="P:lipid catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016035">
        <property type="entry name" value="Acyl_Trfase/lysoPLipase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002641">
        <property type="entry name" value="PNPLA_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01734">
        <property type="entry name" value="Patatin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52151">
        <property type="entry name" value="SSF52151"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51635">
        <property type="entry name" value="PNPLA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0442">Lipid degradation</keyword>
    <keyword evidence="1 2" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PNPLA" evidence="3">
        <location>
            <begin position="9"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="GXGXXG" evidence="2">
        <location>
            <begin position="13"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="GXSXG" evidence="2">
        <location>
            <begin position="50"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="DGA/G" evidence="2">
        <location>
            <begin position="203"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="2">
        <location>
            <position position="52"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="2">
        <location>
            <position position="203"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01161"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51635"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ65346.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="361" mass="39901" checksum="8D2E868FF27CBCF5" modified="2015-12-09" version="1">MTQKKRFILSIDGGGVRGLIPLRILESLESRLVHRGVTQPMHELFDLMAGTSTGGLIAAGLSAPRPGGNKGEAAATISELRTFYERDAREVFSYSLSARLARAFTNPLGLFDETYDARPLEKILKEQFGWTSMASGLCKLVLTAYDIEQRKAVFMTNGLEQNGSRPDDYYFWQAVRATTAAPSYFEPAKIENLTRKREEPMVDGGVFMNDPTIAAYLEARKLGWDTEELVIISLGTGRAQERNFSYQEAVGWGALGWMQPSKGVPILSIFSDGQTQTASYQATHLFNELPNVTYHRIEGELEASAEDFDNARPGNILTLNGAADRMIRDNTVLLDNLADLLKDHVETREKDASDAVLGHAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTE5</accession>
    <name>A0A0M6ZTE5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Glutathione-binding protein GsiB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">gsiB_2</name>
        <name evidence="7" type="ORF">LAX5112_00683</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the bacterial solute-binding protein 5 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65577.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00683"/>
    <dbReference type="EnsemblBacteria" id="CTQ65577">
        <property type="protein sequence ID" value="CTQ65577"/>
        <property type="gene ID" value="LAX5112_00683"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030288">
        <property type="term" value="C:outer membrane-bounded periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030678">
        <property type="entry name" value="Peptide/Ni-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039424">
        <property type="entry name" value="SBP_5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023765">
        <property type="entry name" value="SBP_5_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000914">
        <property type="entry name" value="SBP_5_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30290">
        <property type="entry name" value="PTHR30290"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00496">
        <property type="entry name" value="SBP_bac_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002741">
        <property type="entry name" value="MppA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01040">
        <property type="entry name" value="SBP_BACTERIAL_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0574">Periplasm</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 5" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="5">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809266" evidence="5">
        <location>
            <begin position="25"/>
            <end position="527"/>
        </location>
    </feature>
    <feature type="domain" description="SBP_bac_5" evidence="6">
        <location>
            <begin position="67"/>
            <end position="443"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ65577.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="527" mass="58253" checksum="34AA6F520D46ADED" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTT4</accession>
    <name>A0A0M6ZTT4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Maltose/maltodextrin import ATP-binding protein MalK</fullName>
            <ecNumber evidence="10">3.6.3.19</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">malK_2</name>
        <name evidence="10" type="ORF">LAX5112_00713</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Peripheral membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.19" evidence="10"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65662.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670649.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00713"/>
    <dbReference type="EnsemblBacteria" id="CTQ65662">
        <property type="protein sequence ID" value="CTQ65662"/>
        <property type="gene ID" value="LAX5112_00713"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008643">
        <property type="term" value="P:carbohydrate transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03301">
        <property type="entry name" value="ABC_MalK_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015855">
        <property type="entry name" value="ABC_transpr_MalK-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008995">
        <property type="entry name" value="Mo/tungstate-bd_C_term_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013611">
        <property type="entry name" value="Transp-assoc_OB_typ2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08402">
        <property type="entry name" value="TOBE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50331">
        <property type="entry name" value="SSF50331"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 8 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="10" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-0472">Membrane</keyword>
    <keyword evidence="5 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ABC transporter" evidence="9">
        <location>
            <begin position="4"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="36"/>
            <end position="43"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ65662.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="331" mass="36253" checksum="C58BD637250FC364" modified="2015-12-09" version="1">MTALSLKNIYKSFGVVEVLKNINIEVEEGEFVVFVGPSGCGKSTLLRIIAGLEDATSGEVNIGGNVVNTTPPSKRGIAMVFQSYALYPHLNVRGNMSLALKQEGHSKAEISSRITEASRMLNLEDYLDRYPSELSGGQRQRVAIGRAIVRQPKLFLFDEPLSNLDAALRMNTRLEIANLHQQLGTSIVYVTHDQTEAMTLADKIVVLREGRVEQIGSPMELYNNPVNKFVAGFLGSPSMNFLPAETVTPGDTRTLGIRPEDLVLSAEGPIKATVQHVEHLGGDTNVIAMTGDKQITARFFGQHDIPAGQQVALRFAQEKVRYFDANGMRQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTX2</accession>
    <name>A0A0M6ZTX2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Bacteriophytochrome cph2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">cph2_2</name>
        <name evidence="4" type="ORF">LAX5112_00714</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65666.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00714"/>
    <dbReference type="EnsemblBacteria" id="CTQ65666">
        <property type="protein sequence ID" value="CTQ65666"/>
        <property type="gene ID" value="LAX5112_00714"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01948">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.450">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001633">
        <property type="entry name" value="EAL_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035919">
        <property type="entry name" value="EAL_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00563">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00052">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141868">
        <property type="entry name" value="SSF141868"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50883">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="2">
        <location>
            <begin position="5"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="domain" description="EAL" evidence="3">
        <location>
            <begin position="137"/>
            <end position="390"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="1">
        <location>
            <position position="55"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ65666.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="394" mass="42860" checksum="869296AFBCA2AD61" modified="2015-12-09" version="1">MGMAKVLIVDDDPFITTLTTKILTRIGYDTVLSAEDGAKGLDAVEAHAPDVILCDLNMPGMDGLEFLRHLAERDAPCAIILVSGEDRRILQTATQLAEAHRLKVLGAIQKPIKPDPLKALLDKHVAQQSAARRGPIESLTLETLKAGLESGAIDVFFQPKVAVPDRKLIGVEALVRWRGEDGKLIPPIAFVPVIEEHGLIDEMTRQVFEKSMVASAAWQKKGLDIKVAVNFSVDSLTRYEVFDLVIAAIAKEGIDPHSVIIEVTESRIMEDVAAPLEILTRLRMKGVGLAIDDYGTGASSMQQLKRIPFTELKIDRAFVDGAPQDEEARAMLESSVSLAQKLGLSTVAEGVETQAEWDLIAELGVDVVQGYFIAKPMPSDELLAWARQNGDLAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZU66</accession>
    <name>A0A0M6ZU66_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 8 10">FAD:protein FMN transferase</fullName>
            <ecNumber evidence="2 8 10">2.7.1.180</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">Flavin transferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="primary">apbE</name>
        <name evidence="11" type="ORF">LAX5112_00743</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 8 10">
            <text>FAD + L-threonyl-[protein] = AMP + FMN-L-threonyl-[protein] + H(+)</text>
            <dbReference type="Rhea" id="RHEA:36847"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11061"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
            <dbReference type="ChEBI" id="CHEBI:74257"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="2.7.1.180"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="9">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <cofactor evidence="9">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
        <text evidence="9">Magnesium. Can also use manganese.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="10">Cell inner membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="8 10">Belongs to the ApbE family.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.180" evidence="2 8 10"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65751.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00743"/>
    <dbReference type="EnsemblBacteria" id="CTQ65751">
        <property type="protein sequence ID" value="CTQ65751"/>
        <property type="gene ID" value="LAX5112_00743"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017013">
        <property type="term" value="P:protein flavinylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.520.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024932">
        <property type="entry name" value="ApbE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003374">
        <property type="entry name" value="ApbE-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30040">
        <property type="entry name" value="PTHR30040"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02424">
        <property type="entry name" value="ApbE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006268">
        <property type="entry name" value="ApbE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF143631">
        <property type="entry name" value="SSF143631"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="10" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8 10" id="KW-0274">FAD</keyword>
    <keyword evidence="4 8 10" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="10 11" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="7 8 9" id="KW-0460">Magnesium</keyword>
    <keyword evidence="10" id="KW-0472">Membrane</keyword>
    <keyword evidence="6 8 9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8 10" id="KW-0808">Transferase</keyword>
    <feature type="binding site" evidence="9">
        <location>
            <position position="198"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="312"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="316"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001219"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011955"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00016337"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRNR" id="PIRNR006268"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR006268-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU363002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ65751.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="363" mass="38609" checksum="B5E30A2658C857D3" modified="2015-12-09" version="1">MKSAAERVTLFAHDQSEMHTVPNNIVFSRRSFILMSLTLAACKGGSDIVELSGSTMGTSYTVNGVDHNRNVDQAALKKALEASLAQVNAQMSNWDASSEVSRFNALRSTAPVTVSEGFAEVVRASREINAASAGQFDITLGPVIEAWGFGSIGGSRPATAEANALAAARKVSGQTDGLKVNGTQISKSHPEAELYLPSIGKGYGVDQMAKVVASFGISDFMVEIGGDLYVSGRNADSMDWQIGIETPTAYTRSAYQVASVTNMGMATSGDYRNYFERDGERFSHIIDAHTGAPITHKTASATVLAENTMLADAWSTAMLVLGTERGLEIANQHDIAVLFIDRSTDADNGFASVASDKFKQLQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVK3</accession>
    <name>A0A0M6ZVK3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Putative aliphatic sulfonates transport permease protein SsuC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ssuC_3</name>
        <name evidence="7" type="ORF">LAX5112_00674</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65554.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670823.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00674"/>
    <dbReference type="EnsemblBacteria" id="CTQ65554">
        <property type="protein sequence ID" value="CTQ65554"/>
        <property type="gene ID" value="LAX5112_00674"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="35"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="94"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="121"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="149"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="206"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="254"/>
            <end position="280"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="88"/>
            <end position="276"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ65554.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="292" mass="32104" checksum="255E2AE776D4745C" modified="2015-12-09" version="1">MTLDIADKRAIAPAPQSVPLDAEELKRARAARREAIGRWVLPIVILVLSVYFWDRLCVWNEIPHYILPRPGLVFETLLADWGILSVALINTLKITFGALLIATLGGLGLAVLFTQSKWIEISFFPFAVILQVTPIIAIAPLILIYVDSITAGLLICAWIVAFFPILSNTTLGLNSADHNLQNLFRLYGASRWQTLRFLRLPASMPYFLGGLKIAGGLSLIGAIVAEFVAGSAGSGSGLANQILEASYRLNMPRMFAALILISVTGILIFLSMNLLSHLLLRKWHESALKREM</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWC0</accession>
    <name>A0A0M6ZWC0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Serralysin A</fullName>
            <ecNumber evidence="6">3.4.24.40</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">prtA</name>
        <name evidence="6" type="ORF">LAX5112_01018</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.4.24.40" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66577.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670915.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ66577">
        <property type="protein sequence ID" value="CTQ66577"/>
        <property type="gene ID" value="LAX5112_01018"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031012">
        <property type="term" value="C:extracellular matrix"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004222">
        <property type="term" value="F:metalloendopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.390.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043708">
        <property type="entry name" value="DUF5648"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024079">
        <property type="entry name" value="MetalloPept_cat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001818">
        <property type="entry name" value="Pept_M10_metallopeptidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021190">
        <property type="entry name" value="Pept_M10A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006026">
        <property type="entry name" value="Peptidase_Metallo"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18885">
        <property type="entry name" value="DUF5648"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00413">
        <property type="entry name" value="Peptidase_M10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00138">
        <property type="entry name" value="MATRIXIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00235">
        <property type="entry name" value="ZnMc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="1" id="KW-0645">Protease</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="ZnMc" evidence="5">
        <location>
            <begin position="63"/>
            <end position="225"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM00235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ66577.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="386" mass="41648" checksum="C9D1EFC0E6EDBB05" modified="2015-12-09" version="1">MCIICGSPVADFSLSYGSDEQKTGSLSWTAERLEGDYNIVSDFVLYNPLPKWGTSGTPGTAGGEVTWSFATTTLIGTTGGTAYASDAAITDPNFQQAVRQAFDVWAQVANISFREVTDSSSTQIRFAMDAIDGVSNTLGFADSRFSSLDGGNTFTTDSVQVIFDTAESWTTTAFLSTAIHEIGHALGIGHSEDPNAIMTAVVVNENYGTSLTQDDINAVQAIYGAATTTPTTPTVTIPEVDLGVYRFFNSSTGTHFYSANHTEAVSISTNLAQYSYESVAYKSVNSTDANAVEFYRFYNTDTGTHFFTASATERDSVISTLSQFNYEGVAYHLHSTADTDDIALYRFFNTETGTHFYTASESEKDNVIATLSQYSYEGIVGYVDVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWC9</accession>
    <name>A0A0M6ZWC9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Beta-lactamase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01195</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67058.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671036.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01195"/>
    <dbReference type="EnsemblBacteria" id="CTQ67058">
        <property type="protein sequence ID" value="CTQ67058"/>
        <property type="gene ID" value="LAX5112_01195"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.710.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001466">
        <property type="entry name" value="Beta-lactam-related"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012338">
        <property type="entry name" value="Beta-lactam/transpept-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00144">
        <property type="entry name" value="Beta-lactamase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56601">
        <property type="entry name" value="SSF56601"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Beta-lactamase" evidence="1">
        <location>
            <begin position="72"/>
            <end position="334"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00144"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67058.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="405" mass="45139" checksum="7D98788CD9CBF241" modified="2015-12-09" version="1">MKRRHFSYLFVSLLIVSFAGYLVQTGERGFGQQTQPARPLDVTRLSKTDTERLGWKAQGLDAVFADVATLSTDTLMIVTDGKVVGAFGDLSKPYNVHSIRKSVLSALVGRHWGSVANEIRLETTLQELSLDDAPIPLTTMQKKTTVRDLLMSRSGINHPAAASGSLQEEIDRRLGNKENEPGTIWAYNNWDYNALTTVFENETGIGIAEAFETGIARPISMDDFDAGSVSYISNTRLSVHKAAMFKMSARDLARFGQLYLDSGRFDGQQILPGAWIDKISSDFTVTGMEGLRWGHGYLWWIPGPNTGLPEGSFWAWGLGNQALIVIPEWDTVIVHQSDTTEFWSRFLPMIRDDGMTGEAAVEKLILSCREAVTRETEFCIDHRLITRREFDRLLSLIAAARVQPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWG1</accession>
    <name>A0A0M6ZWG1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01216</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67109.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671055.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67109">
        <property type="protein sequence ID" value="CTQ67109"/>
        <property type="gene ID" value="LAX5112_01216"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67109.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="104" mass="11567" checksum="ADD75131F430EDE5" modified="2015-12-09" version="1">MIRIFLTDNPRQQLSVLMGQRRTTLVVWYSDFTKRWSFDLAVDDAPVLTGRRIVAGVDLLKPFDLGLGVLFVDAAENPSRNSFIEGTAKLYHATQAEIDAALAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWY2</accession>
    <name>A0A0M6ZWY2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Apple domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">LAX5112_01077</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the protease inhibitor I39 (alpha-2-macroglobulin) family. Bacterial alpha-2-macroglobulin subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66746.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01077"/>
    <dbReference type="EnsemblBacteria" id="CTQ66746">
        <property type="protein sequence ID" value="CTQ66746"/>
        <property type="gene ID" value="LAX5112_01077"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004866">
        <property type="term" value="F:endopeptidase inhibitor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01100">
        <property type="entry name" value="APPLE_Factor_XI_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026284">
        <property type="entry name" value="A2-macglob_dom_prot_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011625">
        <property type="entry name" value="A2M_N_BRD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021868">
        <property type="entry name" value="Alpha_2_Macroglob_MG3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000177">
        <property type="entry name" value="Apple"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041203">
        <property type="entry name" value="Bact_A2M_MG5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041462">
        <property type="entry name" value="Bact_A2M_MG6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041246">
        <property type="entry name" value="Bact_MG10"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001599">
        <property type="entry name" value="Macroglobln_a2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002890">
        <property type="entry name" value="MG2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003609">
        <property type="entry name" value="Pan_app"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008930">
        <property type="entry name" value="Terpenoid_cyclase/PrenylTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00207">
        <property type="entry name" value="A2M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07703">
        <property type="entry name" value="A2M_BRD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17973">
        <property type="entry name" value="bMG10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11974">
        <property type="entry name" value="bMG3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17972">
        <property type="entry name" value="bMG5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17962">
        <property type="entry name" value="bMG6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01835">
        <property type="entry name" value="MG2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00024">
        <property type="entry name" value="PAN_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF038980">
        <property type="entry name" value="A2M_bac"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01360">
        <property type="entry name" value="A2M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01359">
        <property type="entry name" value="A2M_N_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00223">
        <property type="entry name" value="APPLE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48239">
        <property type="entry name" value="SSF48239"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50948">
        <property type="entry name" value="PAN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="20"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="domain" description="Apple" evidence="4">
        <location>
            <begin position="44"/>
            <end position="123"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010556"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50948"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ66746.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="1845" mass="198745" checksum="11DC78195C7E2D79" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXC4</accession>
    <name>A0A0M6ZXC4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">HTH domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_01374</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67405.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008194425.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01374"/>
    <dbReference type="EnsemblBacteria" id="CTQ67405">
        <property type="protein sequence ID" value="CTQ67405"/>
        <property type="gene ID" value="LAX5112_01374"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001034">
        <property type="entry name" value="DeoR_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013196">
        <property type="entry name" value="HTH_11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026881">
        <property type="entry name" value="WYL_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08279">
        <property type="entry name" value="HTH_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13280">
        <property type="entry name" value="WYL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51000">
        <property type="entry name" value="HTH_DEOR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH deoR-type" evidence="3">
        <location>
            <begin position="3"/>
            <end position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51000"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ67405.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="233" mass="26689" checksum="43D74B90B3770E88" modified="2015-12-09" version="1">MRRADRLFQIVQYLRGGRLVRARQLSEWLEVSERTIYRDIADLQASGVPIEGAAGVGYILRDGYDLPPLMFTRDEIVALLAGARIIRAWGGAAMARAAEEAMVKIDAVIPERMRVRQNEIEIHAFAPEMTEDVRALIDFLELAADNRKRLSISYSDAKGQTSDRVLRPLGLWFWGKVWTLVAWCELRNDFRMFRLDRMADVKDTGEKFRPEPGTTLKDFYRLMEAEGHGKPDT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXF0</accession>
    <name>A0A0M6ZXF0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01160</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66967.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ66967">
        <property type="protein sequence ID" value="CTQ66967"/>
        <property type="gene ID" value="LAX5112_01160"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ66967.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="51" mass="5556" checksum="8557C4FCF94778FD" modified="2015-12-09" version="1">MIWAPVRRVGSSDIHLTSAPTHLIVQRTLHNVPKIYGFGKDAVALPPLAPI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="31" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYF6</accession>
    <name>A0A0M6ZYF6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6 8">Pyruvate, phosphate dikinase</fullName>
            <ecNumber evidence="5 8">2.7.9.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="primary">ppdK</name>
        <name evidence="15" type="ORF">LAX5112_01478</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Catalyzes the reversible phosphorylation of pyruvate and phosphate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 8">
            <text>ATP + phosphate + pyruvate = AMP + diphosphate + H(+) + phosphoenolpyruvate</text>
            <dbReference type="Rhea" id="RHEA:10756"/>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58702"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="2.7.9.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 8 11">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="4 8">Belongs to the PEP-utilizing enzyme family.</text>
    </comment>
    <dbReference type="EC" id="2.7.9.1" evidence="5 8"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67679.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671291.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01478"/>
    <dbReference type="EnsemblBacteria" id="CTQ67679">
        <property type="protein sequence ID" value="CTQ67679"/>
        <property type="gene ID" value="LAX5112_01478"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050242">
        <property type="term" value="F:pyruvate, phosphate dikinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006090">
        <property type="term" value="P:pyruvate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1490.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013815">
        <property type="entry name" value="ATP_grasp_subdomain_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008279">
        <property type="entry name" value="PEP-util_enz_mobile_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018274">
        <property type="entry name" value="PEP_util_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000121">
        <property type="entry name" value="PEP_util_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023151">
        <property type="entry name" value="PEP_util_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036637">
        <property type="entry name" value="Phosphohistidine_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002192">
        <property type="entry name" value="PPDK_AMP/ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010121">
        <property type="entry name" value="Pyruvate_phosphate_dikinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015813">
        <property type="entry name" value="Pyrv/PenolPyrv_Kinase-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040442">
        <property type="entry name" value="Pyrv_Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22931">
        <property type="entry name" value="PTHR22931"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00391">
        <property type="entry name" value="PEP-utilizers"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02896">
        <property type="entry name" value="PEP-utilizers_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01326">
        <property type="entry name" value="PPDK_N"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000853">
        <property type="entry name" value="PPDK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51621">
        <property type="entry name" value="SSF51621"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52009">
        <property type="entry name" value="SSF52009"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01828">
        <property type="entry name" value="pyru_phos_dikin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00742">
        <property type="entry name" value="PEP_ENZYMES_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00370">
        <property type="entry name" value="PEP_ENZYMES_PHOS_SITE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="15" id="KW-0418">Kinase</keyword>
    <keyword evidence="11" id="KW-0460">Magnesium</keyword>
    <keyword evidence="7 11" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="15" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="15" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PPDK_N" evidence="13">
        <location>
            <begin position="21"/>
            <end position="297"/>
        </location>
    </feature>
    <feature type="domain" description="PPDK_N" evidence="13">
        <location>
            <begin position="312"/>
            <end position="371"/>
        </location>
    </feature>
    <feature type="domain" description="PEP-utilizers" evidence="12">
        <location>
            <begin position="435"/>
            <end position="516"/>
        </location>
    </feature>
    <feature type="domain" description="PEP-utilizers_C" evidence="14">
        <location>
            <begin position="531"/>
            <end position="882"/>
        </location>
    </feature>
    <feature type="active site" description="Tele-phosphohistidine intermediate" evidence="9">
        <location>
            <position position="468"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="9">
        <location>
            <position position="844"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="574"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="630"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10 11">
        <location>
            <position position="758"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="779"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="780"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="781"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10 11">
        <location>
            <position position="782"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000529"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00003144"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00007837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00011994"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00020138"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRNR" id="PIRNR000853"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR000853-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR000853-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRSR" id="PIRSR000853-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF00391"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF01326"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF02896"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="CTQ67679.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="890" mass="96218" checksum="EF55ADEE6A86F336" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYQ7</accession>
    <name>A0A0M6ZYQ7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01399</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67457.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671200.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67457">
        <property type="protein sequence ID" value="CTQ67457"/>
        <property type="gene ID" value="LAX5112_01399"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67457.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="88" mass="9983" checksum="6744494017A860B5" modified="2015-12-09" version="1">MITQPIIYSVPQTPQPNFGFAEDTKPLGDWPGKPETDRKTLLHVLWLRYAKVMTRQEIAAELNLPLPRVVSCLTEIQAALDEIDPEEP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYT3</accession>
    <name>A0A0M6ZYT3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01334</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67332.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671152.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01334"/>
    <dbReference type="EnsemblBacteria" id="CTQ67332">
        <property type="protein sequence ID" value="CTQ67332"/>
        <property type="gene ID" value="LAX5112_01334"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0830">Ubiquinone</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67332.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="198" mass="22204" checksum="46736567A19020C1" modified="2015-12-09" version="1">MSNNASTAEGWDEEYVAGRWAFLRSLPESGRYGIIGMWLNLTNSIEEVLDIGCGEGLLYERLQPMGVKRYVGMDLSPASLKIANVDPEIASLRAGDMHTFEPEANERFSAIVFNEVLHFAEDPAAVVERYLPFLKDDGVIALSMYSPNKPNSGANKLIEKLWDATDDANKWDVLDDYRLTSDKKGSVTWRMRLVKPVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYU0</accession>
    <name>A0A0M6ZYU0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01569</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67915.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671357.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67915">
        <property type="protein sequence ID" value="CTQ67915"/>
        <property type="gene ID" value="LAX5112_01569"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018680">
        <property type="entry name" value="DUF2164"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09932">
        <property type="entry name" value="DUF2164"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67915.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="84" mass="9555" checksum="10AF80C06311EE0D" modified="2015-12-09" version="1">MPDLKLDKDTRARLNEQIRQYLSDELDTDIGNMEADFLIDFLSGSLGASFYNLGLKDAQALIARKMDDINDELYGMERPDDPVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZG3</accession>
    <name>A0A0M6ZZG3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Daunorubicin/doxorubicin resistance ATP-binding protein DrrA</fullName>
            <ecNumber evidence="6">3.6.3.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">drrA</name>
        <name evidence="6" type="ORF">LAX5112_01603</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.-" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68009.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671382.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01603"/>
    <dbReference type="EnsemblBacteria" id="CTQ68009">
        <property type="protein sequence ID" value="CTQ68009"/>
        <property type="gene ID" value="LAX5112_01603"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="5"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="38"/>
            <end position="45"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ68009.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="308" mass="33801" checksum="F4E1B352707351D4" modified="2015-12-09" version="1">MAPILSVQDLEKTYDGGFQALKSVSLEIEKGEVFALLGPNGAGKTTLISTICGLVRPTSGSITVGGHDALKDYRAARRMIGLVPQEMPTAPFEMVGDTVALSRGLFGLKPNADLVEKILKDLTLWDKRKNPIMALSGGMKRRLLVAKALAHEPEILFLDEPTAGVDVELRHDMWRIVGELKDKGVTIILTTHYIEEAEEMADRVGVINKGEIILVEDKNRLMQKLGRKELTLSLSCAVTDLPPELQKYDLKLSEDGSSLTYTYDTQGERTGITALLTDLSKAGVHFHDLQTDQSSLEDIFVDLVKKGD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZM2</accession>
    <name>A0A0M6ZZM2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01505</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67751.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01505"/>
    <dbReference type="EnsemblBacteria" id="CTQ67751">
        <property type="protein sequence ID" value="CTQ67751"/>
        <property type="gene ID" value="LAX5112_01505"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67751.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="289" mass="32924" checksum="DC1DD22E9ECB2615" modified="2015-12-09" version="1">MGTRNAVGKRHVHAQGCCRVSVPVLARAGVTVSILALLLAGCVRPTGDFDRARPSVIHDSVMPAIGDGAARMREDPVSKFNYTNDEKLLRDRGWTLIRPPWTKDWIGGTMAELARTRVIPETEGRIPPDLYYHYLRSDKFRSSDARFDKIASDATGDADLVMPFCEVALRVREADDERLRVLKNKPLTTEEMYEGAKARVWENRVMIKWVGQALRYRITAYKNALDALEIETPSRDRQWKVNTAIRELQGQVLLAESECQTENRYGTEEPVRRSRIYKGWGNERPPPQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A007</accession>
    <name>A0A0M7A007_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Flagellar basal body P-ring biosynthesis protein FlgA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">LAX5112_01679</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Periplasm</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68219.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671436.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01679"/>
    <dbReference type="EnsemblBacteria" id="CTQ68219">
        <property type="protein sequence ID" value="CTQ68219"/>
        <property type="gene ID" value="LAX5112_01679"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044780">
        <property type="term" value="P:bacterial-type flagellum assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017585">
        <property type="entry name" value="Flag_basal_body_FlgA_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039246">
        <property type="entry name" value="Flagellar_FlgA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013974">
        <property type="entry name" value="SAF"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36307">
        <property type="entry name" value="PTHR36307"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13144">
        <property type="entry name" value="ChapFlgA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00858">
        <property type="entry name" value="SAF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03170">
        <property type="entry name" value="flgA_cterm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0966">Cell projection</keyword>
    <keyword evidence="6" id="KW-0969">Cilium</keyword>
    <keyword evidence="6" id="KW-0282">Flagellum</keyword>
    <keyword evidence="3" id="KW-0574">Periplasm</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809370" evidence="4">
        <location>
            <begin position="24"/>
            <end position="326"/>
        </location>
    </feature>
    <feature type="domain" description="SAF" evidence="5">
        <location>
            <begin position="188"/>
            <end position="250"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM00858"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ68219.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="326" mass="34788" checksum="6639E065F1776BA0" modified="2015-12-09" version="1">MKTLMIAALSLALAALTSFSAAANEHPVLRSQVMTLSDIVTVGDFYSNAGDVAQVPLFRSPDMGTSGNVPATTVAQRARDAGLVTAGTDGLRTVVVHRGATRLNRHQLENLIRNDLAKLEAGIDPEGLEITLLQAPDQILADPKATDPVRIDRINWSRNNGHFTVFATIAVEHGTRPLTVTGTAVEMIDVLVLGQPLKRGDIVQDGDLTTIRLPRLKVNTAALEDGTNIVGKAARVNLRPSQPLSHKDFEYPVLVERGDKVTVTYNVGAMNLTSRAKALTNGAKGDVIDVMNLQSRRVVPATVTSRGQVAVHAAHAIVASLNKEAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A060</accession>
    <name>A0A0M7A060_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Modification methylase RsrI</fullName>
            <ecNumber evidence="6">2.1.1.72</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">rsrIM</name>
        <name evidence="6" type="ORF">LAX5112_01254</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.1.1.72" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67184.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01254"/>
    <dbReference type="EnsemblBacteria" id="CTQ67184">
        <property type="protein sequence ID" value="CTQ67184"/>
        <property type="gene ID" value="LAX5112_01254"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008170">
        <property type="term" value="F:N-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009007">
        <property type="term" value="F:site-specific DNA-methyltransferase (adenine-specific) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002941">
        <property type="entry name" value="DNA_methylase_N4/N6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002295">
        <property type="entry name" value="N4/N6-MTase_EcoPI_Mod-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01555">
        <property type="entry name" value="N6_N4_Mtase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00506">
        <property type="entry name" value="D21N6MTFRASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0235">DNA replication</keyword>
    <keyword evidence="1 6" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N6_N4_Mtase" evidence="5">
        <location>
            <begin position="34"/>
            <end position="379"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="394"/>
            <end position="420"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="394"/>
            <end position="412"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF01555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ67184.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="420" mass="45754" checksum="3EFF002BC6F007E8" modified="2015-12-09" version="1">MSGESFLNGRVTLHCGDCLDRLKEIPDDSIDSGVMDPPYHLTSIVKRFGNNQAPAQDGQTGAFKRASAGFMGQKWDGGDIAFTPDLWREVYRVLKPGAYLLAFASTRGIWRMGVAIEDAGFISHPMIAWLFGSGFPKATRIKADGYEGFRYGGQSLKPAIEPVFMGQKPFEADLNGTQNILTHGTGAVNIDGCRIQGGGEVKPRGSTGLDTNLNQGWHRPWKEDREKVKTAHDVAIENANRLGRWPANVIHDGSDEVVAAFPSNLKSGSGAIKRTTGVGYSGTEYGSENRPVGTEGVAYGDEGSAARFFYSAKADADDRIGSKHPTVKPIDLMRYLVRLVTPPGGTVLDAFAGTGTTGEAAFYEGFNAVLIEREPDFQDDIRRRMKLCLAGPDERKRESIKAKLEQDKQDPGPLFSERMT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A067</accession>
    <name>A0A0M7A067_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Lysine-arginine-ornithine-binding periplasmic protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01525</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67802.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01525"/>
    <dbReference type="EnsemblBacteria" id="CTQ67802">
        <property type="protein sequence ID" value="CTQ67802"/>
        <property type="gene ID" value="LAX5112_01525"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00062">
        <property type="entry name" value="PBPb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="domain" description="PBPb" evidence="2">
        <location>
            <begin position="29"/>
            <end position="243"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00062"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ67802.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="244" mass="27415" checksum="22ED1A001501E360" modified="2015-12-09" version="1">MPILRILGHVLLGASLYAAFTAGARSQDKIIAYTGFLPPLSINAEERGISVEIMELVAKEADIELDIRFAPWKRAQLLVENTPGSLIFSLAYTRKRSEKLKYIAPLIYTESAFITLDEQIDSFEQALADNKVIGVHLGSQRARILRRNGLTNLTEIATAEQMARMLQAGRVDAWYTISMRANYITRKQGFDHTRLQVGAPLSHGVQWLAANKSVSPALKARLSKAVSKVWRDPRYWQIVDSYLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0F0</accession>
    <name>A0A0M7A0F0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Putative propionyl-CoA carboxylase beta chain 5</fullName>
            <ecNumber evidence="4">6.4.1.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">accD5</name>
        <name evidence="4" type="ORF">LAX5112_01769</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="6.4.1.3" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68518.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671498.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01769"/>
    <dbReference type="EnsemblBacteria" id="CTQ68518">
        <property type="protein sequence ID" value="CTQ68518"/>
        <property type="gene ID" value="LAX5112_01769"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004658">
        <property type="term" value="F:propionyl-CoA carboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034733">
        <property type="entry name" value="AcCoA_carboxyl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029045">
        <property type="entry name" value="ClpP/crotonase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011763">
        <property type="entry name" value="COA_CT_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011762">
        <property type="entry name" value="COA_CT_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01039">
        <property type="entry name" value="Carboxyl_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52096">
        <property type="entry name" value="SSF52096"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50989">
        <property type="entry name" value="COA_CT_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50980">
        <property type="entry name" value="COA_CT_NTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0436">Ligase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="CoA carboxyltransferase N-terminal" evidence="2">
        <location>
            <begin position="1"/>
            <end position="257"/>
        </location>
    </feature>
    <feature type="domain" description="CoA carboxyltransferase C-terminal" evidence="3">
        <location>
            <begin position="264"/>
            <end position="504"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ68518.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="510" mass="56398" checksum="466DADBF34B80281" modified="2015-12-09" version="1">MRDVLVELEQRRETAKMGGGQRRIDSQHSKGKLTARERIEILLDEGSFEEFDMFKQHRCTDFGMDEQHIPGDGVVTGWGTVNGRTIYVFSKDFTVFGGSLSEAHAEKIVKLQDMALQNRAPIIGLFDAGGARIQEGVAALGGYGEVFTRNVQASGVIPQISLIMGPCAGGDVYSPAMTDFIFMVRDTSYMFVTGPDVVKTVTNETVTAEELGGASVHTTKSSIADGAFDNDVEALLEMRRLIDFLPMNNQAELPEVTNYDDPDRIDMSLDSFIPDNPNKPYDMKELVLKTLDEGDFYEIQESFAGNIITGFGRMEGRTVGVIANQPMVLAGVLDSDASRKAARFVRFCDCFNIPIVTFVDVPGFLPGTSQEYGGLIKHGAKLLFAYTEATVPKVTVITRKAYGGAYDVMSSKHIRGDINYAWPTAEIAVMGAKGAVEILYRSELGDPEKIQKRTQDYENRFANPFVAAERGYIDDVIRPHSTRRRVSKALALLRAKKVETPWKKHDNIPL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0M1</accession>
    <name>A0A0M7A0M1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Multiple resistance and pH homeostasis protein G</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">mrpG_2</name>
        <name evidence="2" type="ORF">LAX5112_01516</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67780.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008192167.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01516"/>
    <dbReference type="EnsemblBacteria" id="CTQ67780">
        <property type="protein sequence ID" value="CTQ67780"/>
        <property type="gene ID" value="LAX5112_01516"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005451">
        <property type="term" value="F:monovalent cation:proton antiporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0098662">
        <property type="term" value="P:inorganic cation transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005133">
        <property type="entry name" value="PhaG_MnhG_YufB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34703">
        <property type="entry name" value="PTHR34703"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03334">
        <property type="entry name" value="PhaG_MnhG_YufB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01300">
        <property type="entry name" value="CPA3_mnhG_phaG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="40"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="66"/>
            <end position="87"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67780.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="114" mass="11798" checksum="2F2D9F99BB4A4096" modified="2015-12-09" version="1">MSAVVTILAGTMLVIGALFALVASIGIVRLKDVYMRTHAASKAGTLGSGLMLIALAVYAADLAVATRALAGVIFFLLTAPISAHLLAKAAYEAGYRPCADTKEDAMAEVFPQKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="31" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0N1</accession>
    <name>A0A0M7A0N1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 8">30S ribosomal protein S5</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8 13" type="primary">rpsE</name>
        <name evidence="13" type="ORF">LAX5112_01743</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 8">Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body.</text>
    </comment>
    <comment type="function">
        <text evidence="8">With S4 and S12 plays an important role in translational accuracy.</text>
    </comment>
    <comment type="subunit">
        <text evidence="8">Part of the 30S ribosomal subunit. Contacts proteins S4 and S8.</text>
    </comment>
    <comment type="domain">
        <text evidence="8">The N-terminal domain interacts with the head of the 30S subunit; the C-terminal domain interacts with the body and contacts protein S4. The interaction surface between S4 and S5 is involved in control of translational fidelity.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 8 10">Belongs to the universal ribosomal protein uS5 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68449.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671482.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01743"/>
    <dbReference type="EnsemblBacteria" id="CTQ68449">
        <property type="protein sequence ID" value="CTQ68449"/>
        <property type="gene ID" value="LAX5112_01743"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015935">
        <property type="term" value="C:small ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01307_B">
        <property type="entry name" value="Ribosomal_S5_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000851">
        <property type="entry name" value="Ribosomal_S5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005712">
        <property type="entry name" value="Ribosomal_S5_bac-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005324">
        <property type="entry name" value="Ribosomal_S5_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014721">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold_subgr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013810">
        <property type="entry name" value="Ribosomal_S5_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018192">
        <property type="entry name" value="Ribosomal_S5_N_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13718">
        <property type="entry name" value="PTHR13718"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00333">
        <property type="entry name" value="Ribosomal_S5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03719">
        <property type="entry name" value="Ribosomal_S5_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="SSF54211"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01021">
        <property type="entry name" value="rpsE_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00585">
        <property type="entry name" value="RIBOSOMAL_S5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50881">
        <property type="entry name" value="S5_DSRBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 8 9" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="6 8 9" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="5 8" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="4 8" id="KW-0699">rRNA-binding</keyword>
    <feature type="domain" description="S5 DRBM" evidence="12">
        <location>
            <begin position="16"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="153"/>
            <end position="188"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003093"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008945"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00016778"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01307"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00268"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU003823"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50881"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="CTQ68449.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="188" mass="20381" checksum="2C11E4CE66280487" modified="2015-12-09" version="1">MARQENRDREERDSEFVDKLVHINRVAKVVKGGRRFGFAALVVVGDQKGRVGFGHGKAREVPEAIRKATEAAKRTMIRVPLREGRTLHHDVEGRHGAGKVLLRAAPAGTGIIAGGPMRAVFETLGVQDVVAKSLGTSNPYNMVRATFNALTKEDSPRSVAARRGLKVSVLQSRRRDNNDEAAPAAAEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2Q3</accession>
    <name>A0A0M7A2Q3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Cupin domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01873</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68752.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671573.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01873"/>
    <dbReference type="EnsemblBacteria" id="CTQ68752">
        <property type="protein sequence ID" value="CTQ68752"/>
        <property type="gene ID" value="LAX5112_01873"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013096">
        <property type="entry name" value="Cupin_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07883">
        <property type="entry name" value="Cupin_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809411" evidence="1">
        <location>
            <begin position="24"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="domain" description="Cupin_2" evidence="2">
        <location>
            <begin position="90"/>
            <end position="159"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ68752.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="183" mass="19434" checksum="855B51C3D4847588" modified="2015-12-09" version="1">MRLALWIASLGLAVTLGMPVSFAADKSVTPDGKPAPSQPAAKPGSQAAIEKEEAAKTPYNEVREVFSGNQTVAGEDIRFPQNNPSIHSLVVTMAPGEETEWHQHHAPLYAYILEGEITVTYEGIGKKIYREGEGLLEAMNVTHRGVNTGDGSAKILAVFLLGDDGKATVLEEAPGGADTPKIQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2Y0</accession>
    <name>A0A0M7A2Y0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Dna-J like membrane chaperone protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01830</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68660.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008195065.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01830"/>
    <dbReference type="EnsemblBacteria" id="CTQ68660">
        <property type="protein sequence ID" value="CTQ68660"/>
        <property type="gene ID" value="LAX5112_01830"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06257">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001623">
        <property type="entry name" value="DnaJ_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036869">
        <property type="entry name" value="J_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00226">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00271">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46565">
        <property type="entry name" value="SSF46565"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50076">
        <property type="entry name" value="DNAJ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="40"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="domain" description="J" evidence="2">
        <location>
            <begin position="182"/>
            <end position="234"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ68660.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="234" mass="25743" checksum="A65821834C3EF28B" modified="2015-12-09" version="1">MIYLLLGLVLLVVFIAMMRQFVQANPARLAQSIRTYGGILLMILAGVFAVTGRFALAIPAFGFGLSLLGLAGLRNLSGYNPQKTAGQQSQVRSAMVEMELDHDTGALSGTVLAGSFQGRRLDDLTDEELQTFWQEAHQDDQSLKLVEAYLDRRLAGWREDFEPDATHRQRSASSSGPMTDEEAYQILGLSPDAGDAEIRAAHRRLMMRVHPDQGGSGFLAAKINEAKDTLLRRH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A356</accession>
    <name>A0A0M7A356_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Demethylmenaquinone methyltransferase</fullName>
            <ecNumber evidence="2">2.1.1.163</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ubiE_3</name>
        <name evidence="2" type="ORF">LAX5112_02066</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.1.1.163" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69309.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671743.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ69309">
        <property type="protein sequence ID" value="CTQ69309"/>
        <property type="gene ID" value="LAX5112_02066"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043770">
        <property type="term" value="F:demethylmenaquinone methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102094">
        <property type="term" value="F:S-adenosylmethionine:2-demethylmenaquinol methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102955">
        <property type="term" value="F:S-adenosylmethionine:2-demethylmenaquinol-7 methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102027">
        <property type="term" value="F:S-adenosylmethionine:2-demethylquinol-8 methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041698">
        <property type="entry name" value="Methyltransf_25"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13649">
        <property type="entry name" value="Methyltransf_25"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Methyltransf_25" evidence="1">
        <location>
            <begin position="56"/>
            <end position="152"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13649"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69309.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="274" mass="29344" checksum="112DE11389285631" modified="2015-12-09" version="1">MKFLAQAYQNADAFSGSELENLEGLLHLMAAHPGFQAYKEVSYGLLELSPDSHAADVACGLGFDLPHLKALVPRGSVTGFDLSAKFLASAKARIQAAAGGADASIHFLQSDIKALDADTGAFDAVRIDRSLQHIPEPEVAIAEMLRIVRPGGIICAAEPDWGSFVIASSTPEIATKVAAVYACALVNPRIGRDLVDLIGTQTELTHHSVHSLLFKSLADLNRMCVLGDITARSVEAGVITSSENARFWQDLEERDRAGRCFANLNIHLVSGRKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3R1</accession>
    <name>A0A0M7A3R1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Possibl zinc metallo-peptidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02221</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69715.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008191163.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02221"/>
    <dbReference type="EnsemblBacteria" id="CTQ69715">
        <property type="protein sequence ID" value="CTQ69715"/>
        <property type="gene ID" value="LAX5112_02221"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.2010.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010428">
        <property type="entry name" value="Zincin_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038555">
        <property type="entry name" value="Zincin_1_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06262">
        <property type="entry name" value="Zincin_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ69715.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="144" mass="16129" checksum="988075691122EE59" modified="2015-12-09" version="1">MASIHPISRSHWTDLQAPDLKDFEAMASETLATMPDDLLLRCGNLQITLAEYAPDDVLDALSIEDPHDLLGLFEGVGLDEGEELSHTGQMPNRIWLFRRPILDYWAAMDETLGDVVAHVLIHEIGHHFGLSDQDMERLEAAADR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3Y3</accession>
    <name>A0A0M7A3Y3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Molybdate-binding periplasmic protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">modA</name>
        <name evidence="5" type="ORF">LAX5112_02017</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the bacterial solute-binding protein ModA family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69192.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671902.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02017"/>
    <dbReference type="EnsemblBacteria" id="CTQ69192">
        <property type="protein sequence ID" value="CTQ69192"/>
        <property type="gene ID" value="LAX5112_02017"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015689">
        <property type="term" value="P:molybdate ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005950">
        <property type="entry name" value="ModA"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004846">
        <property type="entry name" value="ModA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01256">
        <property type="entry name" value="modA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3" id="KW-0500">Molybdenum</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809111" evidence="4">
        <location>
            <begin position="20"/>
            <end position="253"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="32"/>
        </location>
        <ligand>
            <name>molybdate</name>
            <dbReference type="ChEBI" id="CHEBI:36264"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="59"/>
        </location>
        <ligand>
            <name>molybdate</name>
            <dbReference type="ChEBI" id="CHEBI:36264"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="142"/>
        </location>
        <ligand>
            <name>molybdate</name>
            <dbReference type="ChEBI" id="CHEBI:36264"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="169"/>
        </location>
        <ligand>
            <name>molybdate</name>
            <dbReference type="ChEBI" id="CHEBI:36264"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="187"/>
        </location>
        <ligand>
            <name>molybdate</name>
            <dbReference type="ChEBI" id="CHEBI:36264"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR004846-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ69192.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="253" mass="26131" checksum="A8C52D7B675BF5E8" modified="2015-12-09" version="1">MRLSLILAAVLVLAQTVVAAAERPLTVFAASSMSEAMGAIGAAFEAEGGVAVTFSFAGTGTLARQIEAGAPADVFVSADTLWMDYLKDRGAVLPKSETVIASNRIILAGALDSAPLDLSADAIAARLGDGRLAIADPDTVPAGRYGKAALTALGLWPGVESRLAPMENVRVALAAAARGDTPLALVYATDAAIEPNVRVLAELPADSHPRIEYPAALTTDANHPQAVAFLDFLSGPEAVKILRSFGFVTHKEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4K1</accession>
    <name>A0A0M7A4K1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 5">DNA mismatch repair protein MutL</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 9" type="primary">mutL</name>
        <name evidence="9" type="ORF">LAX5112_02329</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the DNA mismatch repair MutL/HexB family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70035.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671955.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02329"/>
    <dbReference type="EnsemblBacteria" id="CTQ70035">
        <property type="protein sequence ID" value="CTQ70035"/>
        <property type="gene ID" value="LAX5112_02329"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032300">
        <property type="term" value="C:mismatch repair complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140664">
        <property type="term" value="F:ATP-dependent DNA damage sensor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030983">
        <property type="term" value="F:mismatched DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006298">
        <property type="term" value="P:mismatch repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1370.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1540.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00149">
        <property type="entry name" value="DNA_mis_repair"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014762">
        <property type="entry name" value="DNA_mismatch_repair_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020667">
        <property type="entry name" value="DNA_mismatch_repair_MutL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002099">
        <property type="entry name" value="DNA_mismatch_repair_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013507">
        <property type="entry name" value="DNA_mismatch_S5_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038973">
        <property type="entry name" value="MutL/Mlh/Pms"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014790">
        <property type="entry name" value="MutL_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042120">
        <property type="entry name" value="MutL_C_dimsub"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042121">
        <property type="entry name" value="MutL_C_regsub"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037198">
        <property type="entry name" value="MutL_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014721">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold_subgr"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10073">
        <property type="entry name" value="PTHR10073"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01119">
        <property type="entry name" value="DNA_mis_repair"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08676">
        <property type="entry name" value="MutL_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01340">
        <property type="entry name" value="DNA_mis_repair"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00853">
        <property type="entry name" value="MutL_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF118116">
        <property type="entry name" value="SSF118116"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="SSF54211"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00585">
        <property type="entry name" value="mutl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00058">
        <property type="entry name" value="DNA_MISMATCH_REPAIR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0227">DNA damage</keyword>
    <keyword evidence="4 5" id="KW-0234">DNA repair</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DNA_mis_repair" evidence="8">
        <location>
            <begin position="210"/>
            <end position="328"/>
        </location>
    </feature>
    <feature type="domain" description="MutL_C" evidence="7">
        <location>
            <begin position="445"/>
            <end position="588"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="349"/>
            <end position="379"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006082"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00021975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00149"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="SMART" id="SM00853"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="SMART" id="SM01340"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ70035.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="631" mass="68109" checksum="B6083FEC23BF07A8" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4L2</accession>
    <name>A0A0M7A4L2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Phasin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01832</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68663.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671546.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01832"/>
    <dbReference type="EnsemblBacteria" id="CTQ68663">
        <property type="protein sequence ID" value="CTQ68663"/>
        <property type="gene ID" value="LAX5112_01832"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018968">
        <property type="entry name" value="Phasin"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09361">
        <property type="entry name" value="Phasin_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Phasin_2" evidence="1">
        <location>
            <begin position="7"/>
            <end position="102"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF09361"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68663.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="110" mass="12151" checksum="7D0BBFFBEF59F337" modified="2015-12-09" version="1">MMNNFDEIQKMSKDSMDMAMESFGSMSKGFQAIAAEVADYQKKSFEEGTAAVEKLVASKSIDTAFEAQADYVKTSYEGFVGEMTKIGEMVTDLSKDAYKPYEGMIGKFGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4Y2</accession>
    <name>A0A0M7A4Y2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Putative acyl-CoA thioester hydrolase</fullName>
            <ecNumber evidence="5">3.1.2.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">LAX5112_02297</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the acyl coenzyme A hydrolase family.</text>
    </comment>
    <dbReference type="EC" id="3.1.2.-" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ69949.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02297"/>
    <dbReference type="EnsemblBacteria" id="CTQ69949">
        <property type="protein sequence ID" value="CTQ69949"/>
        <property type="gene ID" value="LAX5112_02297"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016790">
        <property type="term" value="F:thiolester hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040170">
        <property type="entry name" value="Cytosol_ACT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033120">
        <property type="entry name" value="HOTDOG_ACOT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029069">
        <property type="entry name" value="HotDog_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006683">
        <property type="entry name" value="Thioestr_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11049">
        <property type="entry name" value="PTHR11049"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03061">
        <property type="entry name" value="4HBT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54637">
        <property type="entry name" value="SSF54637"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51770">
        <property type="entry name" value="HOTDOG_ACOT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HotDog ACOT-type" evidence="4">
        <location>
            <begin position="6"/>
            <end position="118"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010458"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01106"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51770"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ69949.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="132" mass="14224" checksum="ECE7F5F99F123EB4" modified="2015-12-09" version="1">MSEETPQGELTLRTMAMPADTNASGDIFGGWVLSQMDLAGGIAAGQRAQGRVVTIAVDKMKFIRPVHVGDVLCVYTSVGRVGTSSMEIKLEAWALRHRFGGREKVTEAIFTMVAVDDQGKPRPVPKDIPAPQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6E3</accession>
    <name>A0A0M7A6E3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 11">Heme exporter protein D</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">LAX5112_02255</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 11">Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3 11">Cell inner membrane</location>
            <topology evidence="3 11">Single-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 11">Belongs to the CcmD/CycX/HelD family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69800.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008189521.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ69800">
        <property type="protein sequence ID" value="CTQ69800"/>
        <property type="gene ID" value="LAX5112_02255"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017004">
        <property type="term" value="P:cytochrome complex assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015886">
        <property type="term" value="P:heme transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007078">
        <property type="entry name" value="Haem_export_protD_CcmD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04995">
        <property type="entry name" value="CcmD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03141">
        <property type="entry name" value="cytochro_ccmD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="7 11" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="11" id="KW-0201">Cytochrome c-type biogenesis</keyword>
    <keyword evidence="10 11" id="KW-0472">Membrane</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 11" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 11" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6 11" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="6"/>
            <end position="28"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002442"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004377"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00008741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00016461"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU363101"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ69800.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="60" mass="6562" checksum="1DFDD645493C06F5" modified="2015-12-09" version="1">MDLGPHAGFILASYGLCLLTILVLIAWVRLDKAAQEKALNDLADQGIKRARPEDRSTQAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6G2</accession>
    <name>A0A0M7A6G2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Prolyl-tRNA deacylase ProX</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">proX_1</name>
        <name evidence="3" type="ORF">LAX5112_02030</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the PRORSD1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69224.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671717.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02030"/>
    <dbReference type="EnsemblBacteria" id="CTQ69224">
        <property type="protein sequence ID" value="CTQ69224"/>
        <property type="gene ID" value="LAX5112_02030"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0002161">
        <property type="term" value="F:aminoacyl-tRNA editing activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.960.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040285">
        <property type="entry name" value="ProX/PRXD1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036754">
        <property type="entry name" value="YbaK/aa-tRNA-synt-asso_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007214">
        <property type="entry name" value="YbaK/aa-tRNA-synth-assoc-dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31423">
        <property type="entry name" value="PTHR31423"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04073">
        <property type="entry name" value="tRNA_edit"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55826">
        <property type="entry name" value="SSF55826"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="tRNA_edit" evidence="2">
        <location>
            <begin position="24"/>
            <end position="151"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010201"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF04073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ69224.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="175" mass="18989" checksum="A3C40070FA63DAF9" modified="2015-12-09" version="1">MPANRDELMGFFQDLGISVTTVDHDPVFTVAESGDLHERIPGGHTKNLFVKDKKGRLFLITTLHDAEIDLKKVHQVIGAQGRVSFGNADLLMEVLGVEPGSVTPFSLINDREAQRVTPVFDAAMMAHDVLNYHPLKNDATTAITSSDLLKFAKACGHDPQVRAVSAQAQASEVQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6W2</accession>
    <name>A0A0M7A6W2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Histidine-binding periplasmic protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">hisJ</name>
        <name evidence="4" type="ORF">LAX5112_02551</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70619.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672151.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02551"/>
    <dbReference type="EnsemblBacteria" id="CTQ70619">
        <property type="protein sequence ID" value="CTQ70619"/>
        <property type="gene ID" value="LAX5112_02551"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00062">
        <property type="entry name" value="PBPb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809306" evidence="2">
        <location>
            <begin position="25"/>
            <end position="259"/>
        </location>
    </feature>
    <feature type="domain" description="PBPb" evidence="3">
        <location>
            <begin position="28"/>
            <end position="255"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00062"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ70619.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="259" mass="27442" checksum="65501D3E0DA1F22B" modified="2015-12-09" version="1">MKHMIKAAFVATAVSVAAISGAQAQDVKVGVAAEPYPPFTSPDASGNWVGWEVEFMEAVCAEAKLNCVITPVAWDGIIPALTSGKIDMIVGSMSITEERLKTIDFSDKYYNTPTSIIGAKGDDFEATPEGLSGKILGVQVSTIHAAYADKYFAPTADDIKQYQTQDEANQDLAAGRVDAVQADAIALDAFLKSDAGACCEYKGNVADDPAILGAGVGVGLRKGEDELKEKINAAIAAIRTNGTYEEFSKKYFDFDIYGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6Z1</accession>
    <name>A0A0M7A6Z1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02316</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70000.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02316"/>
    <dbReference type="EnsemblBacteria" id="CTQ70000">
        <property type="protein sequence ID" value="CTQ70000"/>
        <property type="gene ID" value="LAX5112_02316"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809121" evidence="2">
        <location>
            <begin position="23"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="65"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="70"/>
            <end position="91"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ70000.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="241" mass="26032" checksum="895A6DE7AA58C274" modified="2015-12-09" version="1">MVRTLGDFISKGLLLAALTGLAACQAADGTTVAPDTALVNNIMSGLGAVDPNKKEIEYKPRAPLAMPADNTTLPSPSTEVAGAGSQNWPEQRNEDEMNALRDRYEVATDHRGDLKRLTPEQMAGIEIVGVERPASTPELRAASDPDTALGPGKRLSPEQMKIESERFNALKQQQAGTQTAGAALQRQYLIEPPAAYSTPSADAPMPSTEIEVKKEYVKVQRDHETNRLDPRCMAGESKYCN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A721</accession>
    <name>A0A0M7A721_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Exodeoxyribonuclease 7 small subunit</fullName>
            <ecNumber evidence="3">3.1.11.6</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">Exodeoxyribonuclease VII small subunit</fullName>
            <shortName evidence="3">Exonuclease VII small subunit</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3 4" type="primary">xseB</name>
        <name evidence="4" type="ORF">LAX5112_02501</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>Exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield nucleoside 5'-phosphates.</text>
            <dbReference type="EC" id="3.1.11.6"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="3">Heterooligomer composed of large and small subunits.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the XseB family.</text>
    </comment>
    <dbReference type="EC" id="3.1.11.6" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70417.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008190357.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02501"/>
    <dbReference type="EnsemblBacteria" id="CTQ70417">
        <property type="protein sequence ID" value="CTQ70417"/>
        <property type="gene ID" value="LAX5112_02501"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009318">
        <property type="term" value="C:exodeoxyribonuclease VII complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008855">
        <property type="term" value="F:exodeoxyribonuclease VII activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006308">
        <property type="term" value="P:DNA catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.1040">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00337">
        <property type="entry name" value="Exonuc_7_S"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003761">
        <property type="entry name" value="Exonuc_VII_S"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037004">
        <property type="entry name" value="Exonuc_VII_ssu_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34137">
        <property type="entry name" value="PTHR34137"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02609">
        <property type="entry name" value="Exonuc_VII_S"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF116842">
        <property type="entry name" value="SSF116842"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01280">
        <property type="entry name" value="xseB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2 3" id="KW-0269">Exonuclease</keyword>
    <keyword evidence="3 4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0540">Nuclease</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009998"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022839"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00337"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ70417.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="84" mass="9240" checksum="7779B2ECA58FFF3A" modified="2015-12-09" version="1">MSDAAKEIAGLSFEDALKQLETIVRELEQGNVPLERSIEMYERGDALRQHCDTLLKAAEAKVEKIQLGQNGEPTGTTELDPQNG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7M5</accession>
    <name>A0A0M7A7M5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02550</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70617.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70617">
        <property type="protein sequence ID" value="CTQ70617"/>
        <property type="gene ID" value="LAX5112_02550"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="85"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="85"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="119"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="144"/>
            <end position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70617.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="164" mass="18523" checksum="E093A15BB248EA0D" modified="2015-12-09" version="1">MPRWHSLDGTTQNFRLVGALNNADHENPGGETADVDTRQADEAQQCVHCICAGVIEEQDENQFRHRPDHRGVDFQKIPEDRAAIEFAKGPRNPDHETEREPADGELQRRGKAFQKHAAPAGRRKSEKVQIEKSGINGHWRQATFSKGEGRRRKCAPAEERKAGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A927</accession>
    <name>A0A0M7A927_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02897</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71655.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008194497.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ71655">
        <property type="protein sequence ID" value="CTQ71655"/>
        <property type="gene ID" value="LAX5112_02897"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="49"/>
            <end position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71655.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="68" mass="7595" checksum="5831684A120D50AC" modified="2015-12-09" version="1">MADLSLPRPGCCKWAEGDSGNYTFPCSNRVEPGVSYCEDHRSIVYIPPEERRRNRSGGGMSLSFRRAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9I8</accession>
    <name>A0A0M7A9I8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase</fullName>
            <ecNumber evidence="5">2.7.1.49</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">thiD</name>
        <name evidence="5" type="ORF">LAX5112_02708</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine + ATP = 4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine + ADP</text>
            <dbReference type="Rhea" id="RHEA:19893"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:57841"/>
            <dbReference type="ChEBI" id="CHEBI:58354"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.4.7"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>4-amino-5-hydroxymethyl-2-methylpyrimidine + ATP = 4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:23096"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16892"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:58354"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.1.49"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3">Cofactor biosynthesis; thiamine diphosphate biosynthesis; 4-amino-2-methyl-5-diphosphomethylpyrimidine from 5-amino-1-(5-phospho-D-ribosyl)imidazole: step 3/3.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.49" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71076.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672263.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02708"/>
    <dbReference type="EnsemblBacteria" id="CTQ71076">
        <property type="protein sequence ID" value="CTQ71076"/>
        <property type="gene ID" value="LAX5112_02708"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00060">
        <property type="reaction ID" value="UER00138"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008902">
        <property type="term" value="F:hydroxymethylpyrimidine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008972">
        <property type="term" value="F:phosphomethylpyrimidine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009228">
        <property type="term" value="P:thiamine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009229">
        <property type="term" value="P:thiamine diphosphate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd01169">
        <property type="entry name" value="HMPP_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1190.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045029">
        <property type="entry name" value="HMP/HMP-P_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004399">
        <property type="entry name" value="HMP/HMP-P_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013749">
        <property type="entry name" value="PM/HMP-P_kinase-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029056">
        <property type="entry name" value="Ribokinase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20858">
        <property type="entry name" value="PTHR20858"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08543">
        <property type="entry name" value="Phos_pyr_kin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53613">
        <property type="entry name" value="SSF53613"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00097">
        <property type="entry name" value="HMP-P_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0418">Kinase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Phos_pyr_kin" evidence="4">
        <location>
            <begin position="12"/>
            <end position="260"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000151"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00000565"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004769"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF08543"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ71076.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="270" mass="27934" checksum="D3189BC7B1612E12" modified="2015-12-09" version="1">MTAIAVTIAGSDSGGGAGIQADLKSFSANGVYGASVLTALTAQNTLGVTAIHDVPVEFVRAQIDAVYSDLAVTATKIGMFSQVPIIEEVADGLKRHQTGPVVLDPVMVAASGDPLLAESAVATLISKLVPLADIITPNLHEAARMLEGEVARNENDMQSQAKQLIDLGAKAVLLKGGHGDSAESADLLTTRNGESFWLREDRIATDNTHGTGCTLSSAIAAGLAKGNALGDAVSSAKAYIQEAIRHADELKIGQGHGPVHHFHAFWEGAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AA03</accession>
    <name>A0A0M7AA03_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">HIT domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02827</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71451.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672359.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02827"/>
    <dbReference type="EnsemblBacteria" id="CTQ71451">
        <property type="protein sequence ID" value="CTQ71451"/>
        <property type="gene ID" value="LAX5112_02827"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.428.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011146">
        <property type="entry name" value="HIT-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036265">
        <property type="entry name" value="HIT-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026026">
        <property type="entry name" value="HIT_Hint"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01230">
        <property type="entry name" value="HIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000714">
        <property type="entry name" value="HIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54197">
        <property type="entry name" value="SSF54197"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51084">
        <property type="entry name" value="HIT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HIT" evidence="2">
        <location>
            <begin position="36"/>
            <end position="105"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51084"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ71451.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="141" mass="15932" checksum="5F8CA87137A527E6" modified="2015-12-09" version="1">MSFFDLNPRLEGDSLPVLDLPLSTVRLMKDANYPWLLLVPRKPDLVEIIDLEKDDQLQLMREIALASRVLRAATECEKLNVGALGNQVSQLHVHVIARFQDDAAWPGPIWGVVSPKPYEDAADEHLINRLRDSFAAETDFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AA64</accession>
    <name>A0A0M7AA64_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Histidine phosphatase superfamily (Branch 1)</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03016</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72035.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03016"/>
    <dbReference type="EnsemblBacteria" id="CTQ72035">
        <property type="protein sequence ID" value="CTQ72035"/>
        <property type="gene ID" value="LAX5112_03016"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1240">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013078">
        <property type="entry name" value="His_Pase_superF_clade-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029033">
        <property type="entry name" value="His_PPase_superfam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00300">
        <property type="entry name" value="His_Phos_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00855">
        <property type="entry name" value="PGAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53254">
        <property type="entry name" value="SSF53254"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ72035.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="196" mass="21505" checksum="087643A1F168BF85" modified="2015-12-09" version="1">MTFTPIGSRFSLQRVALVLVFAWGMLLTMPHARADDVAWQALENGRIVLFRHALAPGTGDPANFTLGDCSTQRNLNDKGRADSRAIGQAFQDKGINVGRVLTSQWCRCVETAELAFPGQVEEEPVFNSFFQNRSAGPEQTRAAQRILEQWSGDGALVVITHQVNITALTDIFPQSGEGIVIQINNGEIDVIGRLRI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAG1</accession>
    <name>A0A0M7AAG1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Magnesium-protoporphyrin O-methyltransferase</fullName>
            <ecNumber evidence="2">2.1.1.11</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">bchM</name>
        <name evidence="2" type="ORF">LAX5112_02949</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.1.1.11" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71849.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672463.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02949"/>
    <dbReference type="EnsemblBacteria" id="CTQ71849">
        <property type="protein sequence ID" value="CTQ71849"/>
        <property type="gene ID" value="LAX5112_02949"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046406">
        <property type="term" value="F:magnesium protoporphyrin IX methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015995">
        <property type="term" value="P:chlorophyll biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010251">
        <property type="entry name" value="Mg_prot_MeTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010940">
        <property type="entry name" value="Mg_prot_MeTrfase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07109">
        <property type="entry name" value="Mg-por_mtran_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02021">
        <property type="entry name" value="BchM-ChlM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51556">
        <property type="entry name" value="SAM_MT_MG_PIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Mg-por_mtran_C" evidence="1">
        <location>
            <begin position="138"/>
            <end position="238"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71849.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="239" mass="26468" checksum="A73CDEEC0D676409" modified="2015-12-09" version="1">MTRASYIQRIGEIEHYFDRTALDAWKKLTGDQPVSGIRATVRQGREDMRSTLASWLPQDLTGWRILDAGCGSGVLSMELVARGADVVGIDLSAQMVSFARQRAAEQMSRLNGHPHGTVTFKSGDMLDPHLGQFDAVVAMDVLIHYAPEDAKKVLEQFAERTSKSLLFTLAPSSHLLKAMLMIGKAFPRADRAPAIYPANPERLVDQLVHQPHMAGWTSGRTHRISVGFYTSQAMEVIRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABS6</accession>
    <name>A0A0M7ABS6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Multidrug transporter activation protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">mta_1</name>
        <name evidence="2" type="ORF">LAX5112_03041</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72081.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672524.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72081">
        <property type="protein sequence ID" value="CTQ72081"/>
        <property type="gene ID" value="LAX5112_03041"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009061">
        <property type="entry name" value="DNA-bd_dom_put_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000551">
        <property type="entry name" value="MerR-type_HTH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021860">
        <property type="entry name" value="Peptidase_S12_Pab87-rel_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11954">
        <property type="entry name" value="DUF3471"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13411">
        <property type="entry name" value="MerR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00040">
        <property type="entry name" value="HTHMERR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00422">
        <property type="entry name" value="HTH_MERR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46955">
        <property type="entry name" value="SSF46955"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50937">
        <property type="entry name" value="HTH_MERR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH merR-type" evidence="1">
        <location>
            <begin position="10"/>
            <end position="78"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50937"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72081.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="362" mass="40338" checksum="E6D426FE4DA0A787" modified="2015-12-09" version="1">MDKKIQNDVLLTAAECAARTGLSVKTLRVYEAQGLITPKRTDKNWRLYGTNEIVRLNEVMILKQLGLSLSKISELLSGQPANLERLLEIQATTLRTRSAQIETSLRLIGQLQLKAKNGLSMEDLLSLAKETHMHEATDDIAWRRYEQARPRTQVEIDPKSLTDYVGDYRFEDGLTGKVRTDAGKLLGGLLGQPEFELFAEAPDKFFLKITPAQVTFDRDETGLVQGLILHQEGFELKANRCEPGTYQKAEDALQDRVKANEPYPGSADQLRTVIAECAAGTVNHDDYTPQLASVIREQLQMVGQELERLGPLKSLDFRGVGAGGYDLYTVDFENGRLEWGLSKAADGRLNGLFMRPAPCDIV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AC90</accession>
    <name>A0A0M7AC90_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Membrane-bound lytic murein transglycosylase B</fullName>
            <ecNumber evidence="3">4.2.2.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">mltB_5</name>
        <name evidence="3" type="ORF">LAX5112_03115</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="4.2.2.-" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72257.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672592.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03115"/>
    <dbReference type="EnsemblBacteria" id="CTQ72257">
        <property type="protein sequence ID" value="CTQ72257"/>
        <property type="gene ID" value="LAX5112_03115"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.101.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023346">
        <property type="entry name" value="Lysozyme-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043426">
        <property type="entry name" value="MltB-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011970">
        <property type="entry name" value="MltB_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002477">
        <property type="entry name" value="Peptidoglycan-bd-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036365">
        <property type="entry name" value="PGBD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036366">
        <property type="entry name" value="PGBDSf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031304">
        <property type="entry name" value="SLT_2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30163">
        <property type="entry name" value="PTHR30163"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01471">
        <property type="entry name" value="PG_binding_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13406">
        <property type="entry name" value="SLT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47090">
        <property type="entry name" value="SSF47090"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53955">
        <property type="entry name" value="SSF53955"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02283">
        <property type="entry name" value="MltB_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0456">Lyase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SLT_2" evidence="2">
        <location>
            <begin position="56"/>
            <end position="348"/>
        </location>
    </feature>
    <feature type="domain" description="PG_binding_1" evidence="1">
        <location>
            <begin position="369"/>
            <end position="416"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13406"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ72257.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="428" mass="47214" checksum="88C412BD15254F58" modified="2015-12-09" version="1">MRDIFRQTTRVIGGMPSISSIKPVLRNGMRALVIAVGSFSASYAYATSGGASDPGFTRFIKDFWPTARSAGISAQTYNAVFTGMQPDNDTIRLMSKQSEFVKPIWEYLDSAVSDTRVEKGRELLIEYDGVLRQIESRYGVDREAVLAIWGMETNYGGFMGRHNVIQALATLAYAAPRRTDFWRKELVTALSIVQAGHVKFSEMEGSWAGAMGHTQFMPSSWKAYSADYNGDGKRDIWTSIPDALASTAYYLKRHGWQTGKTWGYEVQLPNGFDYNLADGEKTLTLGEWQRYGIRRVNGRGFPRQSDNGILVLPAGASGPAFLMLRNFYVIKRYNNATAYALAVGHLADRIIGGGPLAGNWSKEHLPLTRSETTELQALLNQKGFSVGAADGKVGPATRRGIRAYQRSKGMVPDGHPSVVLLAHLKTGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACD5</accession>
    <name>A0A0M7ACD5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03218</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72539.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008192942.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03218"/>
    <dbReference type="EnsemblBacteria" id="CTQ72539">
        <property type="protein sequence ID" value="CTQ72539"/>
        <property type="gene ID" value="LAX5112_03218"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008325">
        <property type="entry name" value="EipA-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06577">
        <property type="entry name" value="EipA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF033924">
        <property type="entry name" value="UCP033924"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809397" evidence="1">
        <location>
            <begin position="31"/>
            <end position="201"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72539.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="201" mass="21384" checksum="A9F1CBA8770DE240" modified="2015-12-09" version="1">MAHMSRLILSILPAAAVILLLSVGPKIAFAQATTNTQTPPANTYDQDQILQTGHQFFGSVSGGLASVLERAFASYGEPNGYILGEEGSGAFVAGARFGEGQLYTRNAGNHKIFWQGPSIGFDFGADGARVMMLIYNLPSIDRVYDRFSGVNGSAYLVGGVGMTVLAKDSVFVVPIKAGVGARLGLNLGYLKFTREPTWNPF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACH8</accession>
    <name>A0A0M7ACH8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Methionine import ATP-binding protein MetN</fullName>
            <ecNumber evidence="5">3.6.3.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">metN</name>
        <name evidence="5" type="ORF">LAX5112_03061</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.6.3.-" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72116.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672534.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03061"/>
    <dbReference type="EnsemblBacteria" id="CTQ72116">
        <property type="protein sequence ID" value="CTQ72116"/>
        <property type="gene ID" value="LAX5112_03061"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017781">
        <property type="entry name" value="ABC_transptr_urea_ATP-bd_UrtD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032823">
        <property type="entry name" value="BCA_ABC_TP_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12399">
        <property type="entry name" value="BCA_ABC_TP_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03411">
        <property type="entry name" value="urea_trans_UrtD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="8"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="40"/>
            <end position="47"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ72116.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="248" mass="27055" checksum="198827838157983D" modified="2015-12-09" version="1">MARSTSQLYLDGVSVSFDGFKAINDLSLTIDPGEMRAIIGPNGAGKTTMMDIITGKTRPDTGEVFFNGVIDLTGEDEASIAELGIGRKFQKPTVFESHTVWDNLELSLKAPRGPFATLFHVITGAEKMRIEELLELIRLGEKRDELAANLSHGQKQWLEIGMLLAQDPKLLLVDEPAAGMTDAETAETAELLKEIAKDHSVVVVEHDMDFVRSLGVKVTVLHEGSVLAEGSLDHVSADERVVEVYLGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACW6</accession>
    <name>A0A0M7ACW6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">N-formylglutamate deformylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03128</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72292.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03128"/>
    <dbReference type="EnsemblBacteria" id="CTQ72292">
        <property type="protein sequence ID" value="CTQ72292"/>
        <property type="gene ID" value="LAX5112_03128"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007709">
        <property type="entry name" value="N-FG_amidohydro"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05013">
        <property type="entry name" value="FGase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ72292.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="306" mass="34411" checksum="80C6B85630986FB1" modified="2015-12-09" version="1">MTSSTPSAPNRQFEVDFNGFPAFDVLSPADQRLPFVFNSPHSGRQYPESFLAASRLDARSIRRSEDAYVDELFSHVVPLGAPMLRAHFPRAYLDVNREPYELDPKMFDGRLPSYANIRSIRVAGGLGTVARIVSENHEIYRHRLPVEEALSRVETIYKPYHSTLRRLLAQTHVTFGHAVLIDCHSMPSTVKCQTTDTRPDFILGDRYGTSCNSDLTDFAFETLRSKGYSVSRNKPYAGGFITEHYGRPSSGLHALQIEINRGLYMDEATHEPTTHFGQLFHDLKDFVRELTAMPDAGLVADSIAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AD93</accession>
    <name>A0A0M7AD93_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Membrane dipeptidase (Peptidase family M19)</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03332</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72849.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672749.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03332"/>
    <dbReference type="EnsemblBacteria" id="CTQ72849">
        <property type="protein sequence ID" value="CTQ72849"/>
        <property type="gene ID" value="LAX5112_03332"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070573">
        <property type="term" value="F:metallodipeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01301">
        <property type="entry name" value="rDP_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000180">
        <property type="entry name" value="Dipep_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032466">
        <property type="entry name" value="Metal_Hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008257">
        <property type="entry name" value="Pept_M19"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10443">
        <property type="entry name" value="PTHR10443"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01244">
        <property type="entry name" value="Peptidase_M19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51556">
        <property type="entry name" value="SSF51556"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00869">
        <property type="entry name" value="RENAL_DIPEPTIDASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51365">
        <property type="entry name" value="RENAL_DIPEPTIDASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ72849.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="350" mass="38460" checksum="4D4EC1878F8C1B0F" modified="2015-12-09" version="1">MTSHIPAFDGHNDTLLKLEIDAIRGKTRDFFERSDRGHIDLPRAKEGGFAGGLFAMFVPSNPEQDFSKPFSPSDKRNFLPVDQKLALSFTKRMLERAERLETDSDGAVSICRSPDAIESAMEKDQLSISLHIEGAEAIDTNFYELEAFYQRGLRSLGLVWSRENAFGYGVPMAHPHSPDIGPGLTGAGRDLVRACNQTGILVDVSHLNEKGFWDVARITDKPIIASHSNVHAICANSRNLTDKQLDAIKESGGLVGINFFVGFLRPDGNFNQDTPLDVVADHAAYLVDRLGEDGVALGSDFDGCAPPRDLSDVTGLPRLAEVLDARGFSKQTLEKVFFRNWINALKTTAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADD4</accession>
    <name>A0A0M7ADD4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Threonine efflux protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">rhtC_1</name>
        <name evidence="6" type="ORF">LAX5112_03177</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72426.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03177"/>
    <dbReference type="EnsemblBacteria" id="CTQ72426">
        <property type="protein sequence ID" value="CTQ72426"/>
        <property type="gene ID" value="LAX5112_03177"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006865">
        <property type="term" value="P:amino acid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001123">
        <property type="entry name" value="LeuE-type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30086">
        <property type="entry name" value="PTHR30086"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01810">
        <property type="entry name" value="LysE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006324">
        <property type="entry name" value="LeuE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="6"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="38"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="68"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="110"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="146"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="187"/>
            <end position="205"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ72426.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="207" mass="22354" checksum="F944F7E76C6A8652" modified="2015-12-09" version="1">MLELFTVISLTIVVAIVPGPDFAVVLRNALIGGRLAGIMTALGIALALGVHVTYALAGIGLIVSQSIFLFNALKLIGAAYLVFLGVTMYRTASREMPADSALAGMPPLKALRWGFFTNVTNPKATMFALSVFLQVTSPETALWTKVSYGVIMASGVFLWFVLVTFFFTLPPVRQQFIRAKLWMERSFGVLLTLFGIGIAVTTSSTRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADW8</accession>
    <name>A0A0M7ADW8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">L-arabinose transport system permease protein AraQ</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">araQ_4</name>
        <name evidence="7" type="ORF">LAX5112_03511</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73345.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03511"/>
    <dbReference type="EnsemblBacteria" id="CTQ73345">
        <property type="protein sequence ID" value="CTQ73345"/>
        <property type="gene ID" value="LAX5112_03511"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="28"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="105"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="141"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="175"/>
            <end position="195"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="216"/>
            <end position="238"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="276"/>
            <end position="297"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="106"/>
            <end position="297"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ73345.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="311" mass="34421" checksum="0C075F971A4318D1" modified="2015-12-09" version="1">MSDTTLSSSTAVGLPAFRFSAAETLKHVVLVFGSLIVLLPFYVMVSYSFKSPAEIMQNIGGFFGAQEAFRDDYCIKLGKDVADCMVTPVIYNYTTAFEKAPLIRYLLNGVIVTASIFFIQVLVALPCAYALAKLRFWGREAVFGLVLFCLLIPVHAIALPLYIMLAKLGLTNTYAALIIPWTISVFGIFLMRQFFMTVPDDLIDAARMDGMNEFSIIWNVMLPTAIPALLAFAIFSVVAHWNDYFWPRIVITGDRSLFTPPLGLREFKGDADGDNFGPMMATATIIVAPLIVAFLIAQRRFIEGITLSGMK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADZ8</accession>
    <name>A0A0M7ADZ8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Bacterial extracellular solute-binding proteins, family 3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_03522</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73375.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672892.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03522"/>
    <dbReference type="EnsemblBacteria" id="CTQ73375">
        <property type="protein sequence ID" value="CTQ73375"/>
        <property type="gene ID" value="LAX5112_03522"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00062">
        <property type="entry name" value="PBPb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809603" evidence="2">
        <location>
            <begin position="31"/>
            <end position="258"/>
        </location>
    </feature>
    <feature type="domain" description="PBPb" evidence="3">
        <location>
            <begin position="32"/>
            <end position="249"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00062"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ73375.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="258" mass="28492" checksum="8C1CDEB1404BD6B9" modified="2015-12-09" version="1">MNGRLKSVRNAISSVGFICGLLTVAEQAQAAEIHLVTENYPPFNFMKDGEIVGLGADQVREIMVRENIEFTIEMLPWSRAFWLAENRKNHCVFTTAYTPARAETFAWISPLGGAELFLIKKAGSQIPSDLAEIVGKFSVGTQRSDYAEYVLKTQGFSSLDYFDDVETVIRQLVQDRLHLAAISSMTFHTLVQQGVEIEMVHGFGDIIGNALACNPETDEALLKRMQNGLDSVIRDGYQADMLKKYTGAASVSALTGEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFP0</accession>
    <name>A0A0M7AFP0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Tetracycline resistance protein, class C</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">tetA_2</name>
        <name evidence="7" type="ORF">LAX5112_03632</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73709.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008193108.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ73709">
        <property type="protein sequence ID" value="CTQ73709"/>
        <property type="gene ID" value="LAX5112_03632"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="7"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="52"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="82"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="143"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="177"/>
            <end position="199"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="228"/>
            <end position="250"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="262"/>
            <end position="283"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="295"/>
            <end position="314"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="320"/>
            <end position="341"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="353"/>
            <end position="377"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="383"/>
            <end position="403"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="6">
        <location>
            <begin position="9"/>
            <end position="407"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ73709.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="417" mass="45408" checksum="33FDAA177BFD1C39" modified="2015-12-09" version="1">MPVVAKITLLFVVFVDLLGQGLVFPIINNLIMNPDTALLPAATSEATRHFDYGLIIGVFFLCWFFGAPYISKLSDSIGRKNAILICLVGALAGYALTIAALYMKSFTLLIVGRAITGLTAGNQPIAQAAMIDGSVDEEDRNRNMGYIITGVSFGLVGGPLIGGFLSDPVILGSYASLQMPFYACFVLVAIAIVLVLFFFKDEKQDLAPFVFKPSEIFELLWRIKNYPVVVRLSVVFLFFHIANLSFYIFVDNYLTSRFGYGTLGGSMIMLTIGVALAFSSTFLVVPVQKRLTKEAILSVTFVVWAISAAAFVAAPHPILTFVPVFCFYFVFGIAYPTFLGLYSAAVTDEEQGWIMGVTIAVFTLVAGVISLLGGRLIAIDLDLPFFTVMAASIIALIVMFIVWNRPEIKSLTRKSGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFZ8</accession>
    <name>A0A0M7AFZ8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Trifunctional nucleotide phosphoesterase protein YfkN</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">yfkN_3</name>
        <name evidence="5" type="ORF">LAX5112_03566</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the 5'-nucleotidase family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73531.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672932.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03566"/>
    <dbReference type="EnsemblBacteria" id="CTQ73531">
        <property type="protein sequence ID" value="CTQ73531"/>
        <property type="gene ID" value="LAX5112_03566"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009166">
        <property type="term" value="P:nucleotide catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.21.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.780.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008334">
        <property type="entry name" value="5'-Nucleotdase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036907">
        <property type="entry name" value="5'-Nucleotdase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006179">
        <property type="entry name" value="5_nucleotidase/apyrase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004843">
        <property type="entry name" value="Calcineurin-like_PHP_ApaH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029052">
        <property type="entry name" value="Metallo-depent_PP-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006311">
        <property type="entry name" value="TAT_signal"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019546">
        <property type="entry name" value="TAT_signal_bac_arc"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11575">
        <property type="entry name" value="PTHR11575"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02872">
        <property type="entry name" value="5_nucleotid_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00149">
        <property type="entry name" value="Metallophos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10518">
        <property type="entry name" value="TAT_signal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01607">
        <property type="entry name" value="APYRASEFAMLY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55816">
        <property type="entry name" value="SSF55816"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56300">
        <property type="entry name" value="SSF56300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Metallophos" evidence="3">
        <location>
            <begin position="96"/>
            <end position="334"/>
        </location>
    </feature>
    <feature type="domain" description="5_nucleotid_C" evidence="4">
        <location>
            <begin position="445"/>
            <end position="608"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006654"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU362119"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00149"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF02872"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ73531.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="671" mass="71965" checksum="5B0AB6FFBA216FB0" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AG06</accession>
    <name>A0A0M7AG06_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Glutamine synthetase</fullName>
            <ecNumber evidence="9">6.3.1.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">glnA_2</name>
        <name evidence="11" type="ORF">LAX5112_03521</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Catalyzes the ATP-dependent biosynthesis of glutamine from glutamate and ammonia.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>ATP + L-glutamate + NH4(+) = ADP + H(+) + L-glutamine + phosphate</text>
            <dbReference type="Rhea" id="RHEA:16169"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.1.2"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="8">Oligomer of 12 subunits arranged in the form of two hexagons.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Oligomer of 12 subunits arranged in the form of two hexameric ring.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 7">Belongs to the glutamine synthetase family.</text>
    </comment>
    <dbReference type="EC" id="6.3.1.2" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73372.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040453337.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03521"/>
    <dbReference type="EnsemblBacteria" id="CTQ73372">
        <property type="protein sequence ID" value="CTQ73372"/>
        <property type="gene ID" value="LAX5112_03521"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004356">
        <property type="term" value="F:glutamate-ammonia ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006542">
        <property type="term" value="P:glutamine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009399">
        <property type="term" value="P:nitrogen fixation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008147">
        <property type="entry name" value="Gln_synt_b-grasp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036651">
        <property type="entry name" value="Gln_synt_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014746">
        <property type="entry name" value="Gln_synth/guanido_kin_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008146">
        <property type="entry name" value="Gln_synth_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027303">
        <property type="entry name" value="Gln_synth_gly_rich_site"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004809">
        <property type="entry name" value="Gln_synth_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001637">
        <property type="entry name" value="Gln_synth_I_adenylation_site"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027302">
        <property type="entry name" value="Gln_synth_N_conserv_site"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00120">
        <property type="entry name" value="Gln-synt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03951">
        <property type="entry name" value="Gln-synt_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01230">
        <property type="entry name" value="Gln-synt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54368">
        <property type="entry name" value="SSF54368"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55931">
        <property type="entry name" value="SSF55931"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00653">
        <property type="entry name" value="GlnA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00180">
        <property type="entry name" value="GLNA_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00182">
        <property type="entry name" value="GLNA_ADENYLATION"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00181">
        <property type="entry name" value="GLNA_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="9 11" id="KW-0436">Ligase</keyword>
    <keyword evidence="5" id="KW-0535">Nitrogen fixation</keyword>
    <keyword evidence="9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Gln-synt_C" evidence="10">
        <location>
            <begin position="103"/>
            <end position="379"/>
        </location>
    </feature>
    <feature type="modified residue" description="O-AMP-tyrosine" evidence="6">
        <location>
            <position position="398"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00003117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009897"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011258"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023231"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR604809-50"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU000384"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU000387"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU004356"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="SMART" id="SM01230"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ73372.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="469" mass="52102" checksum="6A2A72C0552FE102" modified="2015-12-09" version="1">MTTAADILKQIQEKDIKFVDLRFTDPRGKMQHVTMDVALVDEDMFAEGVAFDGSSIAGWKAINESDMMLILDPESAHIDPFFAQSTMAIFCDIVDPITGEAYNRDPRMTAKKAEAYVKSGGFGDTIYIGPEAEFFMFDDVRFNADPYNTGFILDSSELPSNMGSEYETGNMGHRPRTKGGYFPVPPVDSAQDIRSEMLSVMSEMGVPTEKHHHEVAAAQHELGMKFDNLTSCADNMQVYKYVVHQVAHAYGKSATFMPKPVFGDNGTGMHCHLSIWNNGEPTFAGNQYADLSETCLYFIGGILKHAKALNAFTNPSTNSYKRLVPGYEAPVLLAYSSRNRSASCRIPFTSSPKAKRVEVRFPDPTANPYLCFSALLMAGLDGIKNKIHPGDAMDKNLYDLPAEELAEIPTVCGSLREALEAVDADREFLKAGGVFDDDQIDAYIELKMEEVERYEMTPHPVEFDLYYSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGZ7</accession>
    <name>A0A0M7AGZ7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03844</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74378.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74378">
        <property type="protein sequence ID" value="CTQ74378"/>
        <property type="gene ID" value="LAX5112_03844"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="26"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74378.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="125" mass="13731" checksum="A5C607EE49C15296" modified="2015-12-09" version="1">MGYFLRNFHILVFAFVFISGAVWVALNPDQTVTMIKPVVEDAEELAQMAETVYVAVASINFEASVNEAIVVYTAALRMPSMVLERVDHNLKHASERITGLGSHSVAPPSADKLTLREVSAKLKDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AH02</accession>
    <name>A0A0M7AH02_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="13">NADH-quinone oxidoreductase subunit 1</fullName>
            <ecNumber evidence="13">1.6.5.11</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">nqo1_2</name>
        <name evidence="13" type="ORF">LAX5112_03624</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the complex I 51 kDa subunit family.</text>
    </comment>
    <dbReference type="EC" id="1.6.5.11" evidence="13"/>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73686.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672974.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03624"/>
    <dbReference type="EnsemblBacteria" id="CTQ73686">
        <property type="protein sequence ID" value="CTQ73686"/>
        <property type="gene ID" value="LAX5112_03624"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010181">
        <property type="term" value="F:FMN binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008137">
        <property type="term" value="F:NADH dehydrogenase (ubiquinone) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.1590">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1440.230">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.11540">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001949">
        <property type="entry name" value="NADH-UbQ_OxRdtase_51kDa_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011538">
        <property type="entry name" value="Nuo51_FMN-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037225">
        <property type="entry name" value="Nuo51_FMN-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041921">
        <property type="entry name" value="NuoE_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019575">
        <property type="entry name" value="Nuop51_4Fe4S-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037207">
        <property type="entry name" value="Nuop51_4Fe4S-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019554">
        <property type="entry name" value="Soluble_ligand-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01512">
        <property type="entry name" value="Complex1_51K"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10589">
        <property type="entry name" value="NADH_4Fe-4S"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10531">
        <property type="entry name" value="SLBB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00928">
        <property type="entry name" value="NADH_4Fe-4S"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF140490">
        <property type="entry name" value="SSF140490"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF142019">
        <property type="entry name" value="SSF142019"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00644">
        <property type="entry name" value="COMPLEX1_51K_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00645">
        <property type="entry name" value="COMPLEX1_51K_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="5" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="6" id="KW-0288">FMN</keyword>
    <keyword evidence="9" id="KW-0408">Iron</keyword>
    <keyword evidence="10" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="11" id="KW-0520">NAD</keyword>
    <keyword evidence="13" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-1278">Translocase</keyword>
    <feature type="domain" description="NADH_4Fe-4S" evidence="12">
        <location>
            <begin position="480"/>
            <end position="525"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007523"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="SMART" id="SM00928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="CTQ73686.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="558" mass="60749" checksum="B16489497BC9138E" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHR4</accession>
    <name>A0A0M7AHR4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">L-cystine-binding protein TcyA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">tcyA_2</name>
        <name evidence="4" type="ORF">LAX5112_03930</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74638.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008188691.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03930"/>
    <dbReference type="EnsemblBacteria" id="CTQ74638">
        <property type="protein sequence ID" value="CTQ74638"/>
        <property type="gene ID" value="LAX5112_03930"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00062">
        <property type="entry name" value="PBPb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809494" evidence="2">
        <location>
            <begin position="22"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="domain" description="PBPb" evidence="3">
        <location>
            <begin position="23"/>
            <end position="236"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00062"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ74638.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="236" mass="25607" checksum="F5FB3ACDF7B1B41E" modified="2015-12-09" version="1">MKFAAGLIALAAAAVLTPAHAADINLTTEEYKPFNYMEGDKIVGFGAEQVFEIMNRAGLTYDVEMAQWSRAIGLAEKEADYCVFTASHTEARDPLFVWVEPLNVDRTLLIKKAGSDVNATTIDEAMAYSVGTQSQDYTEALLKDKGFPKIDAAKDMETTLKKLAAGRIDMVAVSEAFFNSLKKDGVAVEEAVVLSETVLSMACNPGTNADNVKKMQDALQSMIDDGTQAKILAKYQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHS1</accession>
    <name>A0A0M7AHS1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 11">tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10 11">Glucose-inhibited division protein A</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11 14" type="primary">mnmG</name>
        <name evidence="11" type="synonym">gidA</name>
        <name evidence="14" type="ORF">LAX5112_03773</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2 11">NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 11">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="9 11">Homodimer. Heterotetramer of two MnmE and two MnmG subunits.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="11">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 11">Belongs to the MnmG family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74141.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673138.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03773"/>
    <dbReference type="EnsemblBacteria" id="CTQ74141">
        <property type="protein sequence ID" value="CTQ74141"/>
        <property type="gene ID" value="LAX5112_03773"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0002098">
        <property type="term" value="P:tRNA wobble uridine modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.570">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00129">
        <property type="entry name" value="MnmG_GidA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004416">
        <property type="entry name" value="MnmG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002218">
        <property type="entry name" value="MnmG-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020595">
        <property type="entry name" value="MnmG-rel_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026904">
        <property type="entry name" value="MnmG_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044920">
        <property type="entry name" value="MnmG_C_subdom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040131">
        <property type="entry name" value="MnmG_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11806">
        <property type="entry name" value="PTHR11806"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11806:SF0">
        <property type="entry name" value="PTHR11806:SF0"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01134">
        <property type="entry name" value="GIDA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13932">
        <property type="entry name" value="GIDA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00136">
        <property type="entry name" value="gidA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01280">
        <property type="entry name" value="GIDA_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01281">
        <property type="entry name" value="GIDA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7 11" id="KW-0274">FAD</keyword>
    <keyword evidence="5 11" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="8 11" id="KW-0520">NAD</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 11" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="GIDA" evidence="12">
        <location>
            <begin position="9"/>
            <end position="401"/>
        </location>
    </feature>
    <feature type="domain" description="GIDA_C" evidence="13">
        <location>
            <begin position="404"/>
            <end position="615"/>
        </location>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <begin position="14"/>
            <end position="19"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <begin position="276"/>
            <end position="290"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00003717"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007653"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00020461"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00025948"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00031800"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00129"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF01134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF13932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="CTQ74141.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="627" mass="68099" checksum="AD841333CCE1FC98" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHY1</accession>
    <name>A0A0M7AHY1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Sugar efflux transporter A</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">setA</name>
        <name evidence="10" type="ORF">LAX5112_03794</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the major facilitator superfamily. Set transporter family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74201.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673139.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03794"/>
    <dbReference type="EnsemblBacteria" id="CTQ74201">
        <property type="protein sequence ID" value="CTQ74201"/>
        <property type="gene ID" value="LAX5112_03794"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005351">
        <property type="term" value="F:carbohydrate:proton symporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004750">
        <property type="entry name" value="Sugar_efflux"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23535:SF2">
        <property type="entry name" value="PTHR23535:SF2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="36"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="62"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="88"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="130"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="157"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="198"/>
            <end position="226"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="238"/>
            <end position="258"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="265"/>
            <end position="284"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="290"/>
            <end position="312"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="324"/>
            <end position="345"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="351"/>
            <end position="371"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="9">
        <location>
            <begin position="199"/>
            <end position="384"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006523"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ74201.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="384" mass="41083" checksum="8EDF23AC9D524331" modified="2015-12-09" version="1">MLIIALQLTNSMCVSSLVPMMGFFIVDGLGADPWQIGLYTGLVAPLTLLTNRWAGERLDRGVLVRPQLFIAVIAFLAVAGLLTQTTELWLLLALVAPLMSLSNMGSGIIFTYGRLYADRAGVDIGRMNSWLRMSVSLAWMIGPAAAFSIAAQFGFQAAFISAFGLGLVYLVLWHVVMPKGFRAPPKDTSSADKDPINWGLIMAGVICLTFVITNSLFVSVMPLYFIDQVGLPGFTPGLSLSVKCLLEVIIILASVRLAERFGVRSILLFSAGLAVIDMLLFAQVSEVWQVAAVAVLEGIHYGLFAGVAITFVQSFAPDRPGRATAVYMNSLFLGGMIGSVSMGFIASAVDYRAVLFVASAVSLTGMAVLLATARLRPSPETEPV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIG5</accession>
    <name>A0A0M7AIG5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03529</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73394.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672896.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ73394">
        <property type="protein sequence ID" value="CTQ73394"/>
        <property type="gene ID" value="LAX5112_03529"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809353" evidence="2">
        <location>
            <begin position="30"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="31"/>
            <end position="51"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ73394.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="89" mass="9359" checksum="D140D6733485F38A" modified="2015-12-09" version="1">MFRKVAIAAVATAALATAAVSVAPTEAHAGNRAGAVAAGAIIGLAAGAIIASQVQPRYVAPVRCHNQAVRRWNPYEHRYVVVGYRRVCY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIT6</accession>
    <name>A0A0M7AIT6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">CDP-diacylglycerol--serine O-phosphatidyltransferase</fullName>
            <ecNumber evidence="4">2.7.8.8</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Phosphatidylserine synthase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">LAX5112_03835</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>a CDP-1,2-diacyl-sn-glycerol + L-serine = a 1,2-diacyl-sn-glycero-3-phospho-L-serine + CMP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:16913"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:33384"/>
            <dbReference type="ChEBI" id="CHEBI:57262"/>
            <dbReference type="ChEBI" id="CHEBI:58332"/>
            <dbReference type="ChEBI" id="CHEBI:60377"/>
            <dbReference type="EC" id="2.7.8.8"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 8">Belongs to the CDP-alcohol phosphatidyltransferase class-I family.</text>
    </comment>
    <dbReference type="EC" id="2.7.8.8" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74352.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03835"/>
    <dbReference type="EnsemblBacteria" id="CTQ74352">
        <property type="protein sequence ID" value="CTQ74352"/>
        <property type="gene ID" value="LAX5112_03835"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003882">
        <property type="term" value="F:CDP-diacylglycerol-serine O-phosphatidyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008654">
        <property type="term" value="P:phospholipid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.1760">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004533">
        <property type="entry name" value="CDP-diaglyc--ser_O-PTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000462">
        <property type="entry name" value="CDP-OH_P_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012616">
        <property type="entry name" value="CDP-OH_P_trans_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043130">
        <property type="entry name" value="CDP-OH_PTrfase_TM_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08009">
        <property type="entry name" value="CDP-OH_P_tran_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01066">
        <property type="entry name" value="CDP-OH_P_transf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00473">
        <property type="entry name" value="pssA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00379">
        <property type="entry name" value="CDP_ALCOHOL_P_TRANSF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0464">Manganese</keyword>
    <keyword evidence="10" id="KW-0472">Membrane</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 12" id="KW-0808">Transferase</keyword>
    <keyword evidence="10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="10" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="21"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="49"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="88"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="113"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="148"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="173"/>
            <end position="195"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="215"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="domain" description="CDP-OH_P_tran_2" evidence="11">
        <location>
            <begin position="214"/>
            <end position="249"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="266"/>
            <end position="290"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000287"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010441"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00013174"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00017171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00032361"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU003750"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF08009"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ74352.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="290" mass="31716" checksum="33898B4C42A34221" modified="2015-12-09" version="1">MIEDTGPTPVKTKRQPRFRKVPLRLIVPNMVTLLALCSGLTAVRMAFEGRWEFAVGAVLIAAVLDGLDGRVARLMKGTSKFGAELDSLADFVNFGVVPALMLYIWILNEAGSLGWISALIFAICAALRLARFNVALDDPDKPAWASKFFTGVPAPAGALTVLLPLYFDFLGLFPHWFADSAVVAAYTIAIAFLLISRLPTFSGKNFGTRVRRDYVLPLFVFAVLIVALTASYPFRMLAGGSVLYLLSIPFSWQQHRKLVLADTGKSIDEDGDESDTDLDNIADRDKDHGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJI3</accession>
    <name>A0A0M7AJI3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_04095</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ75039.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04095"/>
    <dbReference type="EnsemblBacteria" id="CTQ75039">
        <property type="protein sequence ID" value="CTQ75039"/>
        <property type="gene ID" value="LAX5112_04095"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809543" evidence="2">
        <location>
            <begin position="31"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="77"/>
            <end position="111"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ75039.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="183" mass="20429" checksum="B6273EFE99306BA9" modified="2015-12-09" version="1">MSKFVAECRKAGVLTCLAVQLICAGSAAQAQMPPEKPQEATVAPAQPAIPYRDSQLYCKNIAEAASDARIQWQTWKMIALEGRLQARIAELQRKEREFEAWVERREQLLEQVEDQVVSIIGRMRPTAAAEQLSTTEEEAAVGVLLKLKARVASAILDEMEPARAAQLTQTMMGFTDPEIQRRF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AK32</accession>
    <name>A0A0M7AK32_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">3-isopropylmalate dehydrogenase</fullName>
            <ecNumber evidence="13">1.1.1.85</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="13">3-IPM-DH</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="13">Beta-IPM dehydrogenase</fullName>
            <shortName evidence="13">IMDH</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="16" type="primary">leuB_1</name>
        <name evidence="13" type="synonym">leuB</name>
        <name evidence="16" type="ORF">LAX5112_03979</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="17" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="13 14">Catalyzes the oxidation of 3-carboxy-2-hydroxy-4-methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2-oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 13 14">
            <text>(2R,3S)-3-isopropylmalate + NAD(+) = 4-methyl-2-oxopentanoate + CO2 + NADH</text>
            <dbReference type="Rhea" id="RHEA:32271"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:17865"/>
            <dbReference type="ChEBI" id="CHEBI:35121"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="EC" id="1.1.1.85"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="13 14">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <cofactor evidence="13 14">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
        <text evidence="13 14">Binds 1 Mg(2+) or Mn(2+) ion per subunit.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="3 13 14">Amino-acid biosynthesis; L-leucine biosynthesis; L-leucine from 3-methyl-2-oxobutanoate: step 3/4.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5 13 14">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="13">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 13">Belongs to the isocitrate and isopropylmalate dehydrogenases family. LeuB type 1 subfamily.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.85" evidence="13"/>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74802.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673274.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03979"/>
    <dbReference type="EnsemblBacteria" id="CTQ74802">
        <property type="protein sequence ID" value="CTQ74802"/>
        <property type="gene ID" value="LAX5112_03979"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00048">
        <property type="reaction ID" value="UER00072"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003862">
        <property type="term" value="F:3-isopropylmalate dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009098">
        <property type="term" value="P:leucine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01033">
        <property type="entry name" value="LeuB_type1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019818">
        <property type="entry name" value="IsoCit/isopropylmalate_DH_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024084">
        <property type="entry name" value="IsoPropMal-DH-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004429">
        <property type="entry name" value="Isopropylmalate_DH"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42979">
        <property type="entry name" value="PTHR42979"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00180">
        <property type="entry name" value="Iso_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01329">
        <property type="entry name" value="Iso_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00169">
        <property type="entry name" value="leuB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00470">
        <property type="entry name" value="IDH_IMDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 13" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="12 13 14" id="KW-0100">Branched-chain amino acid biosynthesis</keyword>
    <keyword evidence="13" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 13 14" id="KW-0432">Leucine biosynthesis</keyword>
    <keyword evidence="9 13" id="KW-0460">Magnesium</keyword>
    <keyword evidence="13" id="KW-0464">Manganese</keyword>
    <keyword evidence="8 13 14" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="11 13 14" id="KW-0520">NAD</keyword>
    <keyword evidence="10 13 16" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Iso_dh" evidence="15">
        <location>
            <begin position="5"/>
            <end position="361"/>
        </location>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <begin position="77"/>
            <end position="90"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="97"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="107"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="135"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="226"/>
        </location>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="250"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="254"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <begin position="290"/>
            <end position="302"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="site" description="Important for catalysis" evidence="13">
        <location>
            <position position="142"/>
        </location>
    </feature>
    <feature type="site" description="Important for catalysis" evidence="13">
        <location>
            <position position="193"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000624"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004762"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00008319"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022430"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="RuleBase" id="RU004445"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="SMART" id="SM01329"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="CTQ74802.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="370" mass="39474" checksum="9C9147B50184A7CD" modified="2015-12-09" version="1">MGSQNLLLLPGDGIGPEIMVEVKKVIAWFNAKGGMAFETDEGLVGGSAYDAHGQSISEEDMAKAMAADAVIFGAVGGPKWDNVAYEVRPEAGLLRLRKDMELFANLRPAICYPALADASSLKKDIIEGLDILIVRELTGGVYFGEPKEITDLGNGQKRGVDTQVYDTYEIERISKVAFELARTRNNKVTSMEKRNVMKSGVLWNEVVTQTHKNGFEDVTLEHMLADAGGMQLVRWPKQFDVIVTDNLFGDMLSDVAAMLTGSLGMLPSASLGAPDAKTGKRKALYEPVHGSAPDIAGTGAANPIAMIASFGMALRYSFEEVAAADLLDKAIANALDKGLRTKDIAAEGEASVSTAEMGDAIVAELDALKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AL40</accession>
    <name>A0A0M7AL40_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Bacterial extracellular solute-binding proteins, family 3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_04385</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75855.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673602.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000023.1"/>
    </dbReference>
    <dbReference type="SMR" id="A0A0M7AL40"/>
    <dbReference type="STRING" id="388408.LAX5112_04385"/>
    <dbReference type="EnsemblBacteria" id="CTQ75855">
        <property type="protein sequence ID" value="CTQ75855"/>
        <property type="gene ID" value="LAX5112_04385"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809571" evidence="2">
        <location>
            <begin position="23"/>
            <end position="270"/>
        </location>
    </feature>
    <feature type="domain" description="PBPb" evidence="3">
        <location>
            <begin position="43"/>
            <end position="250"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00497"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ75855.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="270" mass="30051" checksum="549511C419A9A236" modified="2015-12-09" version="1">MKRVLGAITAAMLAVSAWQASAQTLVLGLENVEYFPWQLPDGSGADLFLIKTAARNLGYAVDFRPVPWRRCLNEAGSNAIDGCFSASFEVSRMDLGVYPMADNRPDTSKALHADSYSLYVPTESNVGWTGSEFENLSGDIGAIYGYSIVTMLQNQGIGVFKADRLGQLFQLLLRDRLDGVAALTAHADHLIEQTPELNGRVRKVGPPLEAKYYYLLFSHGFTESNPEVVSAFYDEIKRVRKSPEYRENYEHIRRTHVEPHTLNYDPPGGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AL42</accession>
    <name>A0A0M7AL42_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Benzoate--CoA ligase</fullName>
            <ecNumber evidence="4">6.2.1.25</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">bclA</name>
        <name evidence="4" type="ORF">LAX5112_04297</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="6.2.1.25" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000022">
        <property type="protein sequence ID" value="CTQ75599.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673527.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000022.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04297"/>
    <dbReference type="EnsemblBacteria" id="CTQ75599">
        <property type="protein sequence ID" value="CTQ75599"/>
        <property type="gene ID" value="LAX5112_04297"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018858">
        <property type="term" value="F:benzoate-CoA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12780">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025110">
        <property type="entry name" value="AMP-bd_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045851">
        <property type="entry name" value="AMP-bd_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020845">
        <property type="entry name" value="AMP-binding_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000873">
        <property type="entry name" value="AMP-dep_Synth/Lig"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042099">
        <property type="entry name" value="ANL_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00501">
        <property type="entry name" value="AMP-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13193">
        <property type="entry name" value="AMP-binding_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00455">
        <property type="entry name" value="AMP_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0007">Acetylation</keyword>
    <keyword evidence="4" id="KW-0436">Ligase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AMP-binding" evidence="2">
        <location>
            <begin position="51"/>
            <end position="442"/>
        </location>
    </feature>
    <feature type="domain" description="AMP-binding_C" evidence="3">
        <location>
            <begin position="451"/>
            <end position="529"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022990"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF13193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ75599.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="539" mass="58311" checksum="05E2DF404E8525D5" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALB0</accession>
    <name>A0A0M7ALB0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1 2">Peptidyl-tRNA hydrolase</fullName>
            <shortName evidence="1">PTH</shortName>
            <ecNumber evidence="1 2">3.1.1.29</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1 5" type="primary">pth</name>
        <name evidence="5" type="ORF">LAX5112_04155</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 2">
            <text>an N-acyl-L-alpha-aminoacyl-tRNA + H2O = a tRNA + an N-acyl-L-amino acid + H(+)</text>
            <dbReference type="Rhea" id="RHEA:54448"/>
            <dbReference type="Rhea" id="RHEA-COMP:10123"/>
            <dbReference type="Rhea" id="RHEA-COMP:13883"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:59874"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:138191"/>
            <dbReference type="EC" id="3.1.1.29"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="1">Monomer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the PTH family.</text>
    </comment>
    <dbReference type="EC" id="3.1.1.29" evidence="1 2"/>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75232.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673407.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04155"/>
    <dbReference type="EnsemblBacteria" id="CTQ75232">
        <property type="protein sequence ID" value="CTQ75232"/>
        <property type="gene ID" value="LAX5112_04155"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004045">
        <property type="term" value="F:aminoacyl-tRNA hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00462">
        <property type="entry name" value="PTH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1470">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00083">
        <property type="entry name" value="Pept_tRNA_hydro_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001328">
        <property type="entry name" value="Pept_tRNA_hydro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018171">
        <property type="entry name" value="Pept_tRNA_hydro_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036416">
        <property type="entry name" value="Pept_tRNA_hydro_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR17224">
        <property type="entry name" value="PTHR17224"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01195">
        <property type="entry name" value="Pept_tRNA_hydro"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53178">
        <property type="entry name" value="SSF53178"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00447">
        <property type="entry name" value="pth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01195">
        <property type="entry name" value="PEPT_TRNA_HYDROL_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01196">
        <property type="entry name" value="PEPT_TRNA_HYDROL_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="1 2 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="188"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="196"/>
            <end position="212"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00083"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU000673"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU004320"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ75232.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="248" mass="27322" checksum="2AB748711D624A29" modified="2015-12-09" version="1">MRLIVGLGNPGGKYAHNRHNIGFMAIDEIHRRNSGFQPWRARFQGQVSEGRLGSEKVLLLKPSTYMNESGRAVGEAMRFFKIEPEDIVVIYDELDLPPAKFRMKKGGGHGGHNGLRSISAHIGQEYRRLRLGIGHPGDKKLVSNYVLGDFSKADQDWLDPLLAEVADQAGLLAEAKDSQFANKMTLALEPEKAQRGNKAASQKPEKAPKPKQQSHIRQARQNKPAAKLPKSGPMADMLKKLLGGGDTT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALR9</accession>
    <name>A0A0M7ALR9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Benzoate anaerobic degradation regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">badR</name>
        <name evidence="2" type="ORF">LAX5112_04300</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000022">
        <property type="protein sequence ID" value="CTQ75607.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673530.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000022.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04300"/>
    <dbReference type="EnsemblBacteria" id="CTQ75607">
        <property type="protein sequence ID" value="CTQ75607"/>
        <property type="gene ID" value="LAX5112_04300"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000835">
        <property type="entry name" value="HTH_MarR-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12802">
        <property type="entry name" value="MarR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00598">
        <property type="entry name" value="HTHMARR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00347">
        <property type="entry name" value="HTH_MARR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50995">
        <property type="entry name" value="HTH_MARR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH marR-type" evidence="1">
        <location>
            <begin position="15"/>
            <end position="149"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75607.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="163" mass="17946" checksum="019C5A41380F4FFB" modified="2015-12-09" version="1">MAAHDTSPEPISKSRLRLWLRMLKATSGIETELRRRLRDECDTTLPRFDVLSALSRYPDGLKMSEISAFLKVSNGNVTGIVERLVEDGHAVRMAVPGDKRANRVKLTSEGHAIFADLAAKHEGWINELMGGLDRTAIAACNEIFEQFGSSGEPETALKKAGRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMM5</accession>
    <name>A0A0M7AMM5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">yiaM</name>
        <name evidence="8" type="ORF">LAX5112_04577</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000026">
        <property type="protein sequence ID" value="CTQ76385.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76385">
        <property type="protein sequence ID" value="CTQ76385"/>
        <property type="gene ID" value="LAX5112_04577"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007387">
        <property type="entry name" value="TRAP_DctQ"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35011">
        <property type="entry name" value="PTHR35011"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04290">
        <property type="entry name" value="DctQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="44"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="84"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="125"/>
            <end position="147"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ76385.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="167" mass="18581" checksum="A315ECC60785F814" modified="2015-12-09" version="1">MLRWLSHMVDFFLALAGFAIVTLVFCNASLRGFAGFDLAWSLEVTSFLLLWSTFIGCAAAIARGAHMRVTEIVENLLPVHLQRVLSIGIDVIITCLLISLIYTGYNISIHTWAQKTTVLYWPVGLLYASMPVGMLLTLIFHLFNMVFDIRNPVVPHSTHSDGGEALQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMN2</accession>
    <name>A0A0M7AMN2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04357</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75781.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673579.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000023.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75781">
        <property type="protein sequence ID" value="CTQ75781"/>
        <property type="gene ID" value="LAX5112_04357"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="74"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75781.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="74" mass="7482" checksum="D16CC190423D9C94" modified="2015-12-09" version="1">MVDRKKPQDDQKKVVNEPFPGGVFPGAGGGSVPSHDDVAPLSVSQGDAPKGPRKVPGGGTPYTPPSGTPTESDT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMP8</accession>
    <name>A0A0M7AMP8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB</fullName>
            <ecNumber evidence="2">3.5.1.110</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">rutB</name>
        <name evidence="2" type="ORF">LAX5112_04334</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.5.1.110" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000022">
        <property type="protein sequence ID" value="CTQ75702.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673552.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000022.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04334"/>
    <dbReference type="EnsemblBacteria" id="CTQ75702">
        <property type="protein sequence ID" value="CTQ75702"/>
        <property type="gene ID" value="LAX5112_04334"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.850">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000868">
        <property type="entry name" value="Isochorismatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036380">
        <property type="entry name" value="Isochorismatase-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00857">
        <property type="entry name" value="Isochorismatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52499">
        <property type="entry name" value="SSF52499"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Isochorismatase" evidence="1">
        <location>
            <begin position="12"/>
            <end position="188"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75702.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="211" mass="22870" checksum="B2FC2AAC1AB8510E" modified="2015-12-09" version="1">MIDLKTWDPKRTAILTIDLQNDFLHQEGAYGRAGQSADSIAALPQRIAPLVKALRARGGHYISAQFTLVPNASGEPLISPHLQVLRPFLGKGDFAPGCFGHTLVDELFPADFVIEKVAYSAFYQTRLEYIMRAVGIDKLIVGGIVTNGGVASTLRDAHLRDIETVLLTDGSAAFKNDVHEATLLSLATVTHQMACADLLDTITTDWPEVTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMY5</accession>
    <name>A0A0M7AMY5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Trehalose transport system permease protein SugB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">sugB_3</name>
        <name evidence="7" type="ORF">LAX5112_04611</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000027">
        <property type="protein sequence ID" value="CTQ76495.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673798.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000027.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04611"/>
    <dbReference type="EnsemblBacteria" id="CTQ76495">
        <property type="protein sequence ID" value="CTQ76495"/>
        <property type="gene ID" value="LAX5112_04611"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="9"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="80"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="119"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="176"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="216"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="273"/>
            <end position="294"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="81"/>
            <end position="294"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ76495.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="309" mass="33962" checksum="4EADC928A1E5BC68" modified="2015-12-09" version="1">MQYERQNPAFYALLAALVFMSVGPILLMFVNSFKLDVDIIGGRTGLLFLPTIRNYETALCDVLWYEPDHLDFCSLKFGGAFINSLIIALASTLITLVIGCMAAYALVRFRFMGRDTISLSTLMVRMVPPAVLLVPVFGLWNNEFCIDKATMVGGWIRDTFGGRGDVCLAGTHSGIILVYVAMNLPFVIWILQSFIVQVPRSLEEAARVDGAGPFQVFFKIVLPLIKPGLAAAAIFTFRIAWNEYLLASALSDRNTKTVPILIVNNMSEFNVEWGVIMATGMLLAIPPIIFTLFASRQIITGMTAGAVKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AN20</accession>
    <name>A0A0M7AN20_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Flagellin</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">LAX5112_04082</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Secreted</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="3">Bacterial flagellum</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the bacterial flagellin family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ75004.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673353.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04082"/>
    <dbReference type="EnsemblBacteria" id="CTQ75004">
        <property type="protein sequence ID" value="CTQ75004"/>
        <property type="gene ID" value="LAX5112_04082"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009288">
        <property type="term" value="C:bacterial-type flagellum"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005198">
        <property type="term" value="F:structural molecule activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001492">
        <property type="entry name" value="Flagellin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046358">
        <property type="entry name" value="Flagellin_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001029">
        <property type="entry name" value="Flagellin_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42792">
        <property type="entry name" value="PTHR42792"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00700">
        <property type="entry name" value="Flagellin_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00669">
        <property type="entry name" value="Flagellin_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3" id="KW-0975">Bacterial flagellum</keyword>
    <keyword evidence="6" id="KW-0966">Cell projection</keyword>
    <keyword evidence="6" id="KW-0969">Cilium</keyword>
    <keyword evidence="6" id="KW-0282">Flagellum</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0964">Secreted</keyword>
    <feature type="domain" description="Flagellin_N" evidence="4">
        <location>
            <begin position="6"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="domain" description="Flagellin_C" evidence="5">
        <location>
            <begin position="265"/>
            <end position="348"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005709"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023143"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU362073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00669"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00700"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ75004.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="348" mass="37280" checksum="EFEBB03639D3E83A" modified="2015-12-09" version="1">MKTTFISTFMLADSSRRNILSQSTLVNKLGVELSSGRKFDIGLDLGARTGESVSVRSEFNFLNGIKDTNALAESRLAVSQAAMDDMLTDAQAFMATLVALKEDPTTADIVKADAEGNMGLLVSRLNSQQNGYFIFGGINSANIPFADYSDPTSPNKVAADAAYLAEFGFDQSNPGVPGITAAAMTTYLSGNFDAMFQSPNWEASWSTASDTPLSSRISASETVATSASANETAFRELAKAYTMMSDLGNEALSDDAYKVVVDTAIQTLGSAMNNLTSVMGKMGTVQEQVKLAGERLDVQTNILNTRINDLELVDKEETSVRLTTALTQLETTYAVTSRMQGLSLLNFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANE8</accession>
    <name>A0A0M7ANE8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04415</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75936.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673625.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000023.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75936">
        <property type="protein sequence ID" value="CTQ75936"/>
        <property type="gene ID" value="LAX5112_04415"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="15"/>
            <end position="35"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75936.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="104" mass="12107" checksum="80A5522BB327C3F4" modified="2015-12-09" version="1">MSDTQDRRPKFRADISLGNILTMLGMIGVGATAWIEVRTTQAEIQAEIKALQNQFERRIVDLERSELERRADRLNQVTLVTEIRADIKYLREAFSRIETDRNSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANP7</accession>
    <name>A0A0M7ANP7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04489</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ76151.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76151">
        <property type="protein sequence ID" value="CTQ76151"/>
        <property type="gene ID" value="LAX5112_04489"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="34"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="67"/>
            <end position="104"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76151.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="235" mass="25971" checksum="41C2B720A7748F0A" modified="2015-12-09" version="1">MRGLAAARSDLKPKSGSDGQYAEDPGPGFPHRAADTTNHREGVVERSDCLTGGDEPGNIPPDQQPAKGNDKGRDSKIADHPALETADNHTGDNTAKDGQHPDYRVSEPHELRQDIRLDHCHHGRHGGEHRADRQVDMACDDDEDHACCHDRNGYGLDRQVEDVARGQEPAFGEHIEHQAQDNERANHTQKARIQLQRGKEVSCRLALRAGQCRIGHCGYSCLETICFFKSRVANP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANV6</accession>
    <name>A0A0M7ANV6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04406</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75910.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75910">
        <property type="protein sequence ID" value="CTQ75910"/>
        <property type="gene ID" value="LAX5112_04406"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ75910.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="50" mass="5292" checksum="54CE8D7497473195" modified="2015-12-09" version="1">MDRLLLAQCFAHGVSGDISAGRGGKMRDQDGEFPPSLFFKLDLGQLAPAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANY5</accession>
    <name>A0A0M7ANY5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04417</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75940.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673627.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000023.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75940">
        <property type="protein sequence ID" value="CTQ75940"/>
        <property type="gene ID" value="LAX5112_04417"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043708">
        <property type="entry name" value="DUF5648"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011044">
        <property type="entry name" value="Quino_amine_DH_bsu"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18885">
        <property type="entry name" value="DUF5648"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50969">
        <property type="entry name" value="SSF50969"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ75940.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="355" mass="38550" checksum="D8963B82062CEAD7" modified="2015-12-09" version="1">MSISYFSDSRGNFGYYNINTGAAEVLATGSVVFTDIAISSTGQFYGITFSNLYTFSFSDGYVVAKNVGALAGGGFNSLEFSEDGKLYGGSGRSVYEINISNAQTTLIFSDFSSSSSGDIFINGENLFLSTSANRLELLNLSTLSVSTVVENTPSSLFGLADTPAGLFGFAGDSIYSIDVDTGVTTFAREVEFSNTLWGATYYPDAAEKHATGVWRFFNTETGSHFYTNSTAERDAIATTLPNFVYEGNAFDVASSGSGDIDVFRFYNTETGTHFYTASELERDNIINSLSNFAYEGVAYKAYSDNGDGSHEALYRFYNTSNNSHFYTASDAERDYIISTLGNYSYEGVAYFIDIV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AP25</accession>
    <name>A0A0M7AP25_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_04735</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000029">
        <property type="protein sequence ID" value="CTQ76878.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673906.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000029.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76878">
        <property type="protein sequence ID" value="CTQ76878"/>
        <property type="gene ID" value="LAX5112_04735"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="35"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="60"/>
            <end position="83"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ76878.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="83" mass="8877" checksum="41FB2463F4016F86" modified="2015-12-09" version="1">MTHTHAKSADYKTQDPEIQTANRKRSRDLQDARPLLQAICLGIFLAAILTAAAAIAGSEARDMTTPGTTIPALTHPLHSELGN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APX0</accession>
    <name>A0A0M7APX0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">UPF0261 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04610</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000027">
        <property type="protein sequence ID" value="CTQ76492.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673797.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000027.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76492">
        <property type="protein sequence ID" value="CTQ76492"/>
        <property type="gene ID" value="LAX5112_04610"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd15488">
        <property type="entry name" value="Tm-1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044122">
        <property type="entry name" value="UPF0261_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06792">
        <property type="entry name" value="UPF0261"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="UPF0261" evidence="1">
        <location>
            <begin position="50"/>
            <end position="374"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF06792"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76492.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="386" mass="41135" checksum="A384694059DEF9BD" modified="2015-12-09" version="1">MAQVLVLATLQTKKAEADFLLRQLIDCGVSSRVVDISLQSNGEILDGAEKRYAMDQAALNVLEDVAAAAGGETEVVLGIGGGTGGEIAFRVLRALPITFPKILVTTLPFDPRAVVADNSIILVPTLADIAGLNAILREVLENAALIAAGLCQKERKGELVDVTPSIGITALGATDGAVAPLVHQLSKRGQESTVFHSNGYGGAAFARFAANGAFNAIIDLTPHELTRIHLAGAHVDMPERFVAGGDLPRIVLPGALNFIGLGQKTLVQSEYLSRPHYEHSGFFTHVKVTDEEMKHVCQRLAESLNRLNGPCAMIVPMGGFSHQDRPGGPIEDPELREVCFDTLKASLNSNIQLLRLDAHLFAPEVTNAILETLNMLTSEEVGPCMT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQK8</accession>
    <name>A0A0M7AQK8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">envZ_3</name>
        <name evidence="5" type="ORF">LAX5112_04627</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000027">
        <property type="protein sequence ID" value="CTQ76540.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673814.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000027.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04627"/>
    <dbReference type="EnsemblBacteria" id="CTQ76540">
        <property type="protein sequence ID" value="CTQ76540"/>
        <property type="gene ID" value="LAX5112_04627"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004673">
        <property type="term" value="F:protein histidine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="158"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="4">
        <location>
            <begin position="242"/>
            <end position="448"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ76540.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="451" mass="49441" checksum="309C82CC1BDE3BC4" modified="2015-12-09" version="1">MKAVSGFRISLALILIFLVLMLTFSVFMARVYQLPAASPLPAPQRLAAIVRLFESLPDADRPTALTSFSSRLLSVSFKDQNTSIRTMTEGRTADTTARLEGYERALAGRLVSISFDRGDANTTVMPALLDTVTLQVDLKTGGALVFAAFLPVRTVWRIPFVLLAGLLGAVIALAMFIFLQNQIRPLRDLSRALENHDYGRNADEIPERLATAPEIRALIRTFNQQQVRLARAEQARSSLITGLQHDIRTFATKLRLRLERSSDTSLRDRATADLEDIVRLLDDALLATQGEVLADKCPDEMVELIDLVASEIAARPTDPVTLKQGNKSDLKELHILGDRLSLRRIVSNLIENALVYGGCAAIEILGTETEVIIHIDDDGPGIPEDKRDLVLEPFVRLEKSRSRATGGFGLGLAIVAKLVAQQGGQLLIADAPTPLKGARVSVTLPRFDPRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQX6</accession>
    <name>A0A0M7AQX6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04425</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ75984.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673640.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000024.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04425"/>
    <dbReference type="EnsemblBacteria" id="CTQ75984">
        <property type="protein sequence ID" value="CTQ75984"/>
        <property type="gene ID" value="LAX5112_04425"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ75984.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="77" mass="8632" checksum="3BAA3871B2D45B22" modified="2015-12-09" version="1">MTPDEREDRLVVDLHGDLAGILAISADHPSQLKFDETEIFKHKKLLEPVRASRADDFDDKQVKLVAGAGFEPATFRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARD1</accession>
    <name>A0A0M7ARD1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Antibiotic biosynthesis monooxygenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04918</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000034">
        <property type="protein sequence ID" value="CTQ77459.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77459">
        <property type="protein sequence ID" value="CTQ77459"/>
        <property type="gene ID" value="LAX5112_04918"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004497">
        <property type="term" value="F:monooxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007138">
        <property type="entry name" value="ABM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03992">
        <property type="entry name" value="ABM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0503">Monooxygenase</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABM" evidence="1">
        <location>
            <begin position="138"/>
            <end position="188"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77459.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="240" mass="27797" checksum="798D48568B60FF68" modified="2015-12-09" version="1">MKAVPRPDHWISYKPLPEMKGKNMGVFAHVVVKDGAQEKVKDIYTNIVDIAIEEKTCTVLSACTSLVDSTNHLLYEEWTDYEEFFEVQFARTYRNGFMRWLQPIMAKPLSAEFTEILHSTGTHPHNVKQNAFSLMKSTHVASGREDDARKLFMEYIDQVGKDSNNLHANVHQSLNNPQHFIIYEVWRNLGYLVEDDMKGDRRCELDHRCAELADHELPGPAMEIFQIYYDPEKYKAPKAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARF1</accession>
    <name>A0A0M7ARF1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Spore coat protein SA</fullName>
            <ecNumber evidence="3">2.4.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">cotSA_2</name>
        <name evidence="3" type="ORF">LAX5112_04920</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.4.-.-" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000035">
        <property type="protein sequence ID" value="CTQ77479.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674063.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000035.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04920"/>
    <dbReference type="EnsemblBacteria" id="CTQ77479">
        <property type="protein sequence ID" value="CTQ77479"/>
        <property type="gene ID" value="LAX5112_04920"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016757">
        <property type="term" value="F:glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001296">
        <property type="entry name" value="Glyco_trans_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022623">
        <property type="entry name" value="Glyco_trans_4_3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12000">
        <property type="entry name" value="Glyco_trans_4_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00534">
        <property type="entry name" value="Glycos_transf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0167">Capsid protein</keyword>
    <keyword evidence="3" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="3" id="KW-0946">Virion</keyword>
    <feature type="domain" description="Glyco_trans_4_3" evidence="2">
        <location>
            <begin position="53"/>
            <end position="195"/>
        </location>
    </feature>
    <feature type="domain" description="Glycos_transf_1" evidence="1">
        <location>
            <begin position="213"/>
            <end position="372"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00534"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF12000"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ77479.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="376" mass="42546" checksum="8195B3A022522E4B" modified="2015-12-09" version="1">MRRSVLFVQPKLPGQFRRQIATALTDPKTDVLLISNASFGGSDVPKGAIHEFYGNPSPKGQLDPLCAEFNTAIATAAEVEKAALKLKLRGYTPDTIIAYYGYGESLFLRGMFPNTRIVTFFEYFYGLKDGAMNFDPEFRQPEAEILRRSKARNSVALLALHDCDEGIVPTKWQLSRMPEEYRHKIKIVPDEIDQDLNKPNPNAILRIAGREFSRKDQIVSYCARALEPTRGIHIFMRSLPRLMKEAPEAHVVIVGKPSTAYDPPLPNGEAYIDKYLSEIKDKIDLKRLHRVGWLEREDLTALFQVSSCHVYLTTPFVASWSLREALACQTPIVASNTAPVREFVEHGKNGYLVDFFDYNRIAETVSATLHQRRQPG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARU4</accession>
    <name>A0A0M7ARU4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Macrolide export ATP-binding/permease protein MacB</fullName>
            <ecNumber evidence="6">3.6.3.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">macB_2</name>
        <name evidence="6" type="ORF">LAX5112_04621</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.-" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000027">
        <property type="protein sequence ID" value="CTQ76523.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673808.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000027.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04621"/>
    <dbReference type="EnsemblBacteria" id="CTQ76523">
        <property type="protein sequence ID" value="CTQ76523"/>
        <property type="gene ID" value="LAX5112_04621"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd03255">
        <property type="entry name" value="ABC_MJ0796_LolCDE_FtsE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017911">
        <property type="entry name" value="MacB_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="8"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="44"/>
            <end position="51"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ76523.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="235" mass="26074" checksum="5E8F266457337290" modified="2015-12-09" version="1">MPHSDPYISLKDIRRIYGQGDAEVRALDGVDIDIKRGEFVAIMGPSGSGKSTAMNLIGCLDRPTSGTYRFNGLEIAGLDGDERALIRRHYLAFIYQGYNLLARTSALDNVELPLIYKGIGKRERRERALHALDLVGLKGRETHDPSQLSGGQQQRVAIARALAGDPHVVLADEPTGNLDTQRSREIMELIGELRRTSGLTIIMVTHDEEIAEYASRLIWMVDGRVHTDRQLKDAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AS25</accession>
    <name>A0A0M7AS25_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Quorum-sensing regulator protein D</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yjiE</name>
        <name evidence="3" type="ORF">LAX5112_04649</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000027">
        <property type="protein sequence ID" value="CTQ76603.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673830.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000027.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04649"/>
    <dbReference type="EnsemblBacteria" id="CTQ76603">
        <property type="protein sequence ID" value="CTQ76603"/>
        <property type="gene ID" value="LAX5112_04649"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00039">
        <property type="entry name" value="HTHLYSR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ76603.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="311" mass="35390" checksum="A40C001C5AC4EB9A" modified="2015-12-09" version="1">MDLYLFRDLLRLSQTGNFSQAAQLCNLSQSAFSRRIRSLEAWVGVTLVDRSRQPVRLTPAGLQMLEAGTQALDRVEHERSQLLEAQSLPDKYVVTFGAQHSIGWRFYPTWLQSFEETYGPILSRLRADDLPNCLRDLQNGDVDFVIAYESAHVRYCDTGRRMARSNALPLETLKIGQDTLIPVSKPTPDGAPLFDLNSGLLELPFLRFGDEAPIGQHLGSLFEQEKIQERLRVVYENAMAGALRIRARDGMGVAWLPETLVAQDIRSRALVQTGRPEWSVPLEITLFRNDKHTNRLTRSIWSFLETRHPIM</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASL8</accession>
    <name>A0A0M7ASL8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Serralysin C</fullName>
            <ecNumber evidence="3">3.4.24.40</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">prtC_2</name>
        <name evidence="3" type="ORF">LAX5112_04928</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.4.24.40" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000035">
        <property type="protein sequence ID" value="CTQ77501.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04928"/>
    <dbReference type="EnsemblBacteria" id="CTQ77501">
        <property type="protein sequence ID" value="CTQ77501"/>
        <property type="gene ID" value="LAX5112_04928"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005615">
        <property type="term" value="C:extracellular space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008237">
        <property type="term" value="F:metallopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd04277">
        <property type="entry name" value="ZnMc_serralysin_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.150.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.390.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024079">
        <property type="entry name" value="MetalloPept_cat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013858">
        <property type="entry name" value="Peptidase_M10B_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006026">
        <property type="entry name" value="Peptidase_Metallo"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034033">
        <property type="entry name" value="Serralysin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011049">
        <property type="entry name" value="Serralysin-like_metalloprot_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08548">
        <property type="entry name" value="Peptidase_M10_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00235">
        <property type="entry name" value="ZnMc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51120">
        <property type="entry name" value="SSF51120"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0964">Secreted</keyword>
    <feature type="domain" description="ZnMc" evidence="2">
        <location>
            <begin position="45"/>
            <end position="221"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ77501.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="506" mass="54574" checksum="1F778FFADAAA45D9" modified="2015-12-09" version="1">MCGLCHHPACDGLDHFRASSGDESNALATGANTPIDQIITQLNRGDASWDATAPITYSFASVVPNYAFGEDAYLGFHAFNEKQEMMARLALSTWGDVADISFVETYPGTGTISFANSSTLAYYSAAHAYLPTEGSWGGDVWVNSAWGFNTDPQIGDYGFKVIVHEIGHAIGQPHPGDYNAGSTRLSYENNAAYTEDSQQYSIMSYWDEENTGADFGDYYAQTPMLHDIAAIQAKYGANMTTRTGDTVYGFNSNTDSELFDFTKNENPVLSIWDAGGEDTLDFSGFAGDVVLDLNPGAFSSAAGMVNNISIAYGADIENGITGAGDDTIVGNMLDNVVDAGGGADTFVVNLDRADAEIYVFDTRPILVHSDHGIDQLTSVETLSFADLDLDVATQHHVSLLEYAASHADVAAFYGTDEDLLYQHFVEHGLSEGRTIDFSAMAYIASHQDLIEVFGTDAEAGALHFLEFGLAEGRSITFDETAFLYANPDLIDIHGTNLNAAQLYIEM</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AT53</accession>
    <name>A0A0M7AT53_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Cellulose 1,4-beta-cellobiosidase</fullName>
            <ecNumber evidence="5">3.2.1.91</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">celK</name>
        <name evidence="5" type="ORF">LAX5112_04695</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.2.1.91" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000028">
        <property type="protein sequence ID" value="CTQ76744.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673876.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000028.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04695"/>
    <dbReference type="EnsemblBacteria" id="CTQ76744">
        <property type="protein sequence ID" value="CTQ76744"/>
        <property type="gene ID" value="LAX5112_04695"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016162">
        <property type="term" value="F:cellulose 1,4-beta-cellobiosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000272">
        <property type="term" value="P:polysaccharide catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.50.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008928">
        <property type="entry name" value="6-hairpin_glycosidase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012341">
        <property type="entry name" value="6hp_glycosidase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001701">
        <property type="entry name" value="Glyco_hydro_9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013783">
        <property type="entry name" value="Ig-like_fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00759">
        <property type="entry name" value="Glyco_hydro_9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48208">
        <property type="entry name" value="SSF48208"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="3 5" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="1 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0624">Polysaccharide degradation</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023326"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ76744.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="920" mass="100180" checksum="DFA9617A2DC08317" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AUJ0</accession>
    <name>A0A0M7AUJ0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">General stress protein 39</fullName>
            <ecNumber evidence="1">1.-.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">ydaD</name>
        <name evidence="1" type="ORF">LAX5112_04916</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.-.-.-" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000034">
        <property type="protein sequence ID" value="CTQ77453.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674062.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000034.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04916"/>
    <dbReference type="EnsemblBacteria" id="CTQ77453">
        <property type="protein sequence ID" value="CTQ77453"/>
        <property type="gene ID" value="LAX5112_04916"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ77453.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="254" mass="26370" checksum="3073E8492B76EE22" modified="2015-12-09" version="1">MTENDTWQGKVAIVTGGSSGIGLATTTALVASGANVLITGRNADKLAEVAASNDQIEALQIDSADVTSGQQIVEAAMSRWGRIDLIVNNSGAGQLLPVGEYDAEIIAKISAVNVVAPSQLVKAAYTALKESKGAIVNIGTAVSRNAAPMLAHYGATKAALEHLTKSWAVELAKDGIRVNTIAPGPVKTGALTGFMGLPEEMAQQVETQEAAQVPLGRRGVTSDIVPWILRLGSSENEWLTGQVLTVDGGWSLRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AVB0</accession>
    <name>A0A0M7AVB0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Minor spike protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_05033</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000045">
        <property type="protein sequence ID" value="CTQ77733.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_05033"/>
    <dbReference type="EnsemblBacteria" id="CTQ77733">
        <property type="protein sequence ID" value="CTQ77733"/>
        <property type="gene ID" value="LAX5112_05033"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046718">
        <property type="term" value="P:viral entry into host cell"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006777">
        <property type="entry name" value="Microvir_H"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04687">
        <property type="entry name" value="Microvir_H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ77733.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="172" mass="19217" checksum="E8065EC79211CFE9" modified="2015-12-09" version="1">MQLDNQKEIAEMQNETQKEIAGIQSATSRQNTKDQVYAQNEMLAYQQKESTARVASIMENTNLSKQQQVSEIMRQMLTQAQTAGQYFTNDQIKEMTRKVSAEVDLVHQQTQNQRYGSSHIGATAKDISNVVTDAASGVVDIFHGIDKAVADTWNNFWKDGKADGIGSNLSRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZMV7</accession>
    <name>A0A0M6ZMV7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Serine--tRNA ligase</fullName>
            <ecNumber evidence="8">6.1.1.11</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">Seryl-tRNA synthetase</fullName>
            <shortName evidence="8">SerRS</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="8">Seryl-tRNA(Ser/Sec) synthetase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8 11" type="primary">serS</name>
        <name evidence="11" type="ORF">LAX5112_00177</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 8">
            <text>ATP + L-serine + tRNA(Sec) = AMP + diphosphate + H(+) + L-seryl-tRNA(Sec)</text>
            <dbReference type="Rhea" id="RHEA:42580"/>
            <dbReference type="Rhea" id="RHEA-COMP:9742"/>
            <dbReference type="Rhea" id="RHEA-COMP:10128"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:33384"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78533"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.11"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>ATP + L-serine + tRNA(Ser) = AMP + diphosphate + H(+) + L-seryl-tRNA(Ser)</text>
            <dbReference type="Rhea" id="RHEA:12292"/>
            <dbReference type="Rhea" id="RHEA-COMP:9669"/>
            <dbReference type="Rhea" id="RHEA-COMP:9703"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:33384"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78533"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.11"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="8">Aminoacyl-tRNA biosynthesis; selenocysteinyl-tRNA(Sec) biosynthesis; L-seryl-tRNA(Sec) from L-serine and tRNA(Sec): step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="8">Homodimer. The tRNA molecule binds across the dimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="domain">
        <text evidence="8">Consists of two distinct domains, a catalytic core and a N-terminal extension that is involved in tRNA binding.</text>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the class-II aminoacyl-tRNA synthetase family. Type-1 seryl-tRNA synthetase subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.11" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64099.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670187.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00177"/>
    <dbReference type="EnsemblBacteria" id="CTQ64099">
        <property type="protein sequence ID" value="CTQ64099"/>
        <property type="gene ID" value="LAX5112_00177"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00906">
        <property type="reaction ID" value="UER00895"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004828">
        <property type="term" value="F:serine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016260">
        <property type="term" value="P:selenocysteine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0097056">
        <property type="term" value="P:selenocysteinyl-tRNA(Sec) biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006434">
        <property type="term" value="P:seryl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00770">
        <property type="entry name" value="SerRS_core"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.930.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00176">
        <property type="entry name" value="Ser_tRNA_synth_type1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002314">
        <property type="entry name" value="aa-tRNA-synt_IIb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006195">
        <property type="entry name" value="aa-tRNA-synth_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045864">
        <property type="entry name" value="aa-tRNA-synth_II/BPL/LPL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002317">
        <property type="entry name" value="Ser-tRNA-ligase_type_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015866">
        <property type="entry name" value="Ser-tRNA-synth_1_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042103">
        <property type="entry name" value="SerRS_1_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033729">
        <property type="entry name" value="SerRS_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010978">
        <property type="entry name" value="tRNA-bd_arm"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43697">
        <property type="entry name" value="PTHR43697"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02403">
        <property type="entry name" value="Seryl_tRNA_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00587">
        <property type="entry name" value="tRNA-synt_2b"/>
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        <property type="entry name" value="Ser-tRNA-synth_IIa"/>
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        <property type="entry name" value="serS"/>
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        <property type="entry name" value="AA_TRNA_LIGASE_II"/>
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    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 8" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
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    <keyword evidence="6 8" id="KW-0648">Protein biosynthesis</keyword>
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        <location>
            <begin position="175"/>
            <end position="412"/>
        </location>
    </feature>
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        <location>
            <begin position="233"/>
            <end position="235"/>
        </location>
    </feature>
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        <location>
            <begin position="37"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="264"/>
            <end position="266"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
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    <feature type="binding site" evidence="8">
        <location>
            <position position="287"/>
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        <ligand>
            <name>L-serine</name>
            <dbReference type="ChEBI" id="CHEBI:33384"/>
        </ligand>
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    <feature type="binding site" evidence="8">
        <location>
            <begin position="351"/>
            <end position="354"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
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    <feature type="binding site" evidence="8">
        <location>
            <position position="387"/>
        </location>
        <ligand>
            <name>L-serine</name>
            <dbReference type="ChEBI" id="CHEBI:33384"/>
        </ligand>
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        <source>
            <dbReference type="ARBA" id="ARBA00001032"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
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        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
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        <source>
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        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="PROSITE" id="PS50862"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="EMBL" id="CTQ64099.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="426" mass="47161" checksum="D10A8E5A2E52A4E9" modified="2015-12-09" version="1">MFDIKWIRENADAFDKALAKRGYEPSAANLIALDDSRRSHITKLQEAQERRNAASKEIGKAKGSGDDVRAQKLIDEVAQIKAFIQSGEEEERKLIAALEEAMAVIPNLPHDDVPEGADEAGNVLYKTHGEKPAFTFNEAPKEHYELGEELGGMDFSTAAKLSGSRFVVLKGQIARLERALGQFMIDMHTQENGYTEVSPPLLVHSDPLYGTGQLPKFEEDLFKTATDHYLIPTAEVPLTNLVAGEIMSEDQLPLRVTALTYCFRSEAGSAGRDTRGMLRQHQFQKCELVSVTTPQESLNELERMLGCAEMILQKLGLHYRVMTLCTGDMGFGARKTYDIEVWLPGQDTFREISSCSVCGDFQARRMNARFRPADSKQPVHVHTLNGSGIAVGRALIAVLENYQNADGSITVPEVLRPYMGGLEKIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZNK5</accession>
    <name>A0A0M6ZNK5_9HYPH</name>
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        <submittedName>
            <fullName evidence="7">Bacillibactin exporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ymfD</name>
        <name evidence="7" type="ORF">LAX5112_00036</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
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            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
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    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
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        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
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    </dbReference>
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    </dbReference>
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    </dbReference>
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    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
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    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
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    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="55"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="85"/>
            <end position="104"/>
        </location>
    </feature>
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        </location>
    </feature>
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        </location>
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            <end position="404"/>
        </location>
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        <location>
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            <end position="410"/>
        </location>
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        </source>
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        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
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            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
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            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ63700.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="422" mass="44103" checksum="15E15D5B12083CC5" modified="2015-12-09" version="1">MTYSNGRPETSLWRDATALALLLTASLKIMANATISPALPALEASFSGEPGAAYLVRFLVSAPSLTVVLVAPLAGFAIDRLGRSWLLMAGVLVFAMSGSAGAYLNDLTAILVSRLLLGVALAFTMTAQVALAGDLFQGNRRSAFMGGQVVAINFGGFLFIGGAGLLAGVSSRLPFLIYALPLLLLPLLWPVMKQEYRNRKSASDMPASLTNGASEPSAAQAGSWLTFALGLAGLSMVTVMMFFLMPSQLPFFLDASGFDGATGTALGLGALTLSGAFTALKFAAIRSRLGLPCTFSVGFLIMGCGFATLAIYPAWQFIIPGCALIGIGYAFVQPALFLAALDIAPSARRGTVSGMITTSMFLGQIVSPFVFTPALQSYGFEAVYAASGVVFVVFASVALAVRFFKPARMTVPSELSLEKPEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPA0</accession>
    <name>A0A0M6ZPA0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00205</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
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            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64177.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ64177">
        <property type="protein sequence ID" value="CTQ64177"/>
        <property type="gene ID" value="LAX5112_00205"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ64177.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="58" mass="6479" checksum="E8A1D9A2E1748318" modified="2015-12-09" version="1">MNRQRTSEASTNARESAYTQISSRMMFGSAATTASDSPRRRFNIFAANVGAGFTWRWA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPS4</accession>
    <name>A0A0M6ZPS4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Sulfite reductase [ferredoxin]</fullName>
            <ecNumber evidence="6">1.8.7.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">sir</name>
        <name evidence="6" type="ORF">LAX5112_00392</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.8.7.1" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64759.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670537.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00392"/>
    <dbReference type="EnsemblBacteria" id="CTQ64759">
        <property type="protein sequence ID" value="CTQ64759"/>
        <property type="gene ID" value="LAX5112_00392"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050311">
        <property type="term" value="F:sulfite reductase (ferredoxin) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.413.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005117">
        <property type="entry name" value="NiRdtase/SiRdtase_haem-b_fer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036136">
        <property type="entry name" value="Nit/Sulf_reduc_fer-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006067">
        <property type="entry name" value="NO2/SO3_Rdtase_4Fe4S_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045169">
        <property type="entry name" value="NO2/SO3_Rdtase_4Fe4S_prot"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045854">
        <property type="entry name" value="NO2/SO3_Rdtase_4Fe4S_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11493">
        <property type="entry name" value="PTHR11493"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01077">
        <property type="entry name" value="NIR_SIR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03460">
        <property type="entry name" value="NIR_SIR_ferr"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55124">
        <property type="entry name" value="SSF55124"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56014">
        <property type="entry name" value="SSF56014"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="2" id="KW-0408">Iron</keyword>
    <keyword evidence="3" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NIR_SIR_ferr" evidence="5">
        <location>
            <begin position="52"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="domain" description="NIR_SIR" evidence="4">
        <location>
            <begin position="119"/>
            <end position="273"/>
        </location>
    </feature>
    <feature type="domain" description="NIR_SIR_ferr" evidence="5">
        <location>
            <begin position="329"/>
            <end position="398"/>
        </location>
    </feature>
    <feature type="domain" description="NIR_SIR" evidence="4">
        <location>
            <begin position="411"/>
            <end position="545"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF01077"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF03460"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ64759.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="552" mass="61674" checksum="B6EDC3B560890715" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPT3</accession>
    <name>A0A0M6ZPT3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Gamma-glutamyltranspeptidase</fullName>
            <ecNumber evidence="1">2.3.2.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">ggt_1</name>
        <name evidence="1" type="ORF">LAX5112_00396</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.3.2.2" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64769.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670372.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00396"/>
    <dbReference type="EnsemblBacteria" id="CTQ64769">
        <property type="protein sequence ID" value="CTQ64769"/>
        <property type="gene ID" value="LAX5112_00396"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102953">
        <property type="term" value="F:hypoglycin A gamma-glutamyl transpeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0103068">
        <property type="term" value="F:leukotriene C4 gamma-glutamyl transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.20.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043137">
        <property type="entry name" value="GGT_ssub"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029055">
        <property type="entry name" value="Ntn_hydrolases_N"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56235">
        <property type="entry name" value="SSF56235"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ64769.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="392" mass="41270" checksum="565A8A12087ADBCE" modified="2015-12-09" version="1">MDFGPTKQIFHIGPATVATPGFLDGLDALSKRGARLTLQDHFAPAIEAASSGFKLTGYQAYLSTVVAPILMATEASRNLFAPVGQLRGAGETFVNPGLAETFRVLGQTSWRDSEIAGALLEEQAANGHLSEADLSAYRVEEREPLSLSVGEARVFLNPRPAASGTLIQYALQHLGDCKPVSLAAALNAADEARLSARGDLSALLKHPLRQNGTTHISAVDADGNACSVTVSNGTGSGEIVNGFGFMLNNILGEEDVNPGGSAGWPVNTRPASMMCPTLLETSDGRLIALGSGGSSRIRSAVFQAVAQLSFGGVPLPEAVQMPRLHVENGHLDLEAGLEQRHLADLINAFSDHRIWAEPNMFFGGVHAVQKTGSGEFEGIGDRRREGVAVIVD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="31" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPY4</accession>
    <name>A0A0M6ZPY4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">C4-dicarboxylate transport transcriptional regulatory protein DctD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">dctD_1</name>
        <name evidence="9" type="ORF">LAX5112_00289</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64417.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670267.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00289"/>
    <dbReference type="EnsemblBacteria" id="CTQ64417">
        <property type="protein sequence ID" value="CTQ64417"/>
        <property type="gene ID" value="LAX5112_00289"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002197">
        <property type="entry name" value="HTH_Fis"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002078">
        <property type="entry name" value="Sigma_54_int"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025944">
        <property type="entry name" value="Sigma_54_int_dom_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02954">
        <property type="entry name" value="HTH_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00158">
        <property type="entry name" value="Sigma54_activat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00688">
        <property type="entry name" value="SIGMA54_INTERACT_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50045">
        <property type="entry name" value="SIGMA54_INTERACT_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0804">Transcription</keyword>
    <keyword evidence="4" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="3" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="domain" description="Response regulatory" evidence="8">
        <location>
            <begin position="5"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="domain" description="Sigma-54 factor interaction" evidence="7">
        <location>
            <begin position="145"/>
            <end position="374"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="6">
        <location>
            <position position="54"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50045"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ64417.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="447" mass="49294" checksum="46030F4AEF217D43" modified="2015-12-09" version="1">MSTQKILFVDDEEHLRFTAKQSLELEGLEVECFPNADQVLQHVTRDFRGILVTDIRLPGTDGLTLMRKALEIDPSFPVILVTGHGDVELAVSSMRDGAYDFIEKPFPPSRLVETVRRALDKRRLTVEVRSLRREVGARDAVEGVLHGRSAVMRALRDQVSAVAAADVDLLIMGDTGVGKEVASRAIHEASLRASMPFVHINCGALPANLVESELFGHEAGAFQGAMRARTGRFEAARGGTVLLDEIDSLSLPLQTKLLHAIQNRVVTRLGSNEPVELDVRFIAATKKDLVAEAAAERFRSDLLYRLNVVTVTVPPLSARREDIPLLFSKLVSDAATRFKRELPEIPDSVLAKVVSQDWPGNVRELRNAADRFVLGLASGDDHSGDEHQDLGLADHMAQHERALIAATLTAHGGSIKETYEALKISRKALYEKMQKHDLSRKAYSEEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQH8</accession>
    <name>A0A0M6ZQH8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Neu5Ac permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">siaT_1</name>
        <name evidence="5" type="ORF">LAX5112_00273</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64370.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008189920.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00273"/>
    <dbReference type="EnsemblBacteria" id="CTQ64370">
        <property type="protein sequence ID" value="CTQ64370"/>
        <property type="gene ID" value="LAX5112_00273"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010656">
        <property type="entry name" value="DctM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004681">
        <property type="entry name" value="TRAP_DctM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33362">
        <property type="entry name" value="PTHR33362"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06808">
        <property type="entry name" value="DctM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006066">
        <property type="entry name" value="HI0050"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00786">
        <property type="entry name" value="dctM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="7"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="50"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="135"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="170"/>
            <end position="195"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="215"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="272"/>
            <end position="293"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="305"/>
            <end position="327"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="359"/>
            <end position="382"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="394"/>
            <end position="422"/>
        </location>
    </feature>
    <feature type="domain" description="DctM" evidence="4">
        <location>
            <begin position="9"/>
            <end position="418"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF06808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ64370.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="426" mass="44697" checksum="7BEDD8349A5478CA" modified="2015-12-09" version="1">MIAFTSFGLLGLLALSIPVGIVLFLLAFGIDTFFSPFPLMRGLGQVVWSSSNSATLIAIPLFVLLGEILVRSGVARRTYSALEKWVAWMPGGLIHANIATSTMFSATSGSSVATAATVATVAMPQAKELGYNQKLFSGAIAAGGTLGIMIPPSINLIVYGFLTESSIPQLFLAGLIPGLALAGLFMLITVLLCIFKPSLGGPKRPSSLAEKLSGLGDLLPILGLFAAIIGSIYAGWATPTEAATVGVALALLIAAQQKALNWEMLSEALRGAVKTSAMIMLVVIGAYVLNFALTAAGVSRSLQNLLGGLGLGPLETLLVIILMYIILGFFIETLSLMVATIPIVVPIIVQLGYDKIWFGILMIILVEMALITPPVGLNLYVVQAARKTGRFSDVMLGCIPYALAMLAMVGLLILMPQIALFLPSTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQP3</accession>
    <name>A0A0M6ZQP3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Site-specific recombinase XerD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_00504</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65085.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670455.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ65085">
        <property type="protein sequence ID" value="CTQ65085"/>
        <property type="gene ID" value="LAX5112_00504"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.130">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.443.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011010">
        <property type="entry name" value="DNA_brk_join_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013762">
        <property type="entry name" value="Integrase-like_cat_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002104">
        <property type="entry name" value="Integrase_catalytic"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010998">
        <property type="entry name" value="Integrase_recombinase_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00589">
        <property type="entry name" value="Phage_integrase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56349">
        <property type="entry name" value="SSF56349"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51898">
        <property type="entry name" value="TYR_RECOMBINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tyr recombinase" evidence="3">
        <location>
            <begin position="164"/>
            <end position="338"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ65085.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="362" mass="41654" checksum="9FEF0CC7F71B95B7" modified="2015-12-09" version="1">MRTHLKGINIIRRRLATGEIRTYYYHRATNMRLAGEPGSPEFLDSIAAAVEQSRQRDAGTLGGLIREFQQTAKWRRLAESTKNEYRRIFKFWEDQYGTCPYPALEDKAFRRAVIKWHDAFSEAKPREADNRVTVLARVLSWATRDGPLKRNIMDGFERAYQSDRSDKIWLPEHVDAFLRVASPEMKLAMVLALHSGQRQGDILQLAWNNYDGERISLRQGKSRRGKIEGRLVTIKCTRALKETLDHLPKRSTLILTTKTGKAFKKRYFALQWEKTCREAGIEDLHFHDIRGTTVTMLFQAGCNLGEIVSITGHSLRRAQDILDKYLARTSTMADNAIAKFENVLETDSAKQTAKQDRKNHAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQS4</accession>
    <name>A0A0M6ZQS4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6 15">Succinyl-diaminopimelate desuccinylase</fullName>
            <shortName evidence="15">SDAP desuccinylase</shortName>
            <ecNumber evidence="5 15">3.5.1.18</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="14 15">N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="17" type="primary">dapE_1</name>
        <name evidence="15" type="synonym">dapE</name>
        <name evidence="17" type="ORF">LAX5112_00520</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="18" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="18">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="15">Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 15">
            <text>H2O + N-succinyl-(2S,6S)-2,6-diaminoheptanedioate = (2S,6S)-2,6-diaminoheptanedioate + succinate</text>
            <dbReference type="Rhea" id="RHEA:22608"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:30031"/>
            <dbReference type="ChEBI" id="CHEBI:57609"/>
            <dbReference type="ChEBI" id="CHEBI:58087"/>
            <dbReference type="EC" id="3.5.1.18"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="15">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <cofactor evidence="15">
            <name>Co(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:48828"/>
        </cofactor>
        <text evidence="15">Binds 2 Zn(2+) or Co(2+) ions per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2 15">Amino-acid biosynthesis; L-lysine biosynthesis via DAP pathway; LL-2,6-diaminopimelate from (S)-tetrahydrodipicolinate (succinylase route): step 3/3.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4 15">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 15">Belongs to the peptidase M20A family. DapE subfamily.</text>
    </comment>
    <dbReference type="EC" id="3.5.1.18" evidence="5 15"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65129.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670465.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00520"/>
    <dbReference type="EnsemblBacteria" id="CTQ65129">
        <property type="protein sequence ID" value="CTQ65129"/>
        <property type="gene ID" value="LAX5112_00520"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00034">
        <property type="reaction ID" value="UER00021"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050897">
        <property type="term" value="F:cobalt ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009014">
        <property type="term" value="F:succinyl-diaminopimelate desuccinylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019877">
        <property type="term" value="P:diaminopimelate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009089">
        <property type="term" value="P:lysine biosynthetic process via diaminopimelate"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01690">
        <property type="entry name" value="DapE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036264">
        <property type="entry name" value="Bact_exopeptidase_dim_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005941">
        <property type="entry name" value="DapE_proteobac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002933">
        <property type="entry name" value="Peptidase_M20"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011650">
        <property type="entry name" value="Peptidase_M20_dimer"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07687">
        <property type="entry name" value="M20_dimer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01546">
        <property type="entry name" value="Peptidase_M20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55031">
        <property type="entry name" value="SSF55031"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01246">
        <property type="entry name" value="dapE_proteo"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 15" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="13 15" id="KW-0170">Cobalt</keyword>
    <keyword evidence="11 15" id="KW-0220">Diaminopimelate biosynthesis</keyword>
    <keyword evidence="9 15 17" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="12 15" id="KW-0457">Lysine biosynthesis</keyword>
    <keyword evidence="8 15" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10 15" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="M20_dimer" evidence="16">
        <location>
            <begin position="183"/>
            <end position="286"/>
        </location>
    </feature>
    <feature type="active site" evidence="15">
        <location>
            <position position="75"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="15">
        <location>
            <position position="141"/>
        </location>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="73"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="106"/>
        </location>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="142"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="170"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="359"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>2</label>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001246"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005130"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006746"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00011921"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022391"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022915"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023154"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023285"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00031891"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01690"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="Pfam" id="PF07687"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="CTQ65129.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="387" mass="41522" checksum="47EB2C7BA9D6F204" modified="2015-12-09" version="1">MSMSPATVIARDLIRCPSVTPNEGGALSALETLLKDAGFRVDRVVFKDDDTPDVENLFASVGSGAPHFVFAGHTDVVPAGSEADWTHGPFEGEVDSGVLYGRGAVDMKGGIASFAAAALEFVDQNGTDFGGTISFLITGDEEGPAINGTVKLLEWAKKQGHRFDACIVGEPTNPDALGDAIKVGRRGSLSGIVTVTGVQGHAAYPHLADNPIPGLTMLMAALNGLKMDEGNERFQPSNLEIVTVDVGNTAFNVIPARAEFRFNIRYNDVWTLDSLKAKILETLETVNLGSLKMNIEFKRDASESFLTKDETLIEVLSKAVSEETGRTPELSTGGGTSDARFIKNYCPVVEFGLVGQTMHKVDECVAVEDLDRLAAIYHRFLVSYFSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZR25</accession>
    <name>A0A0M6ZR25_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Putative 2-aminoethylphosphonate transport system permease protein PhnV</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">phnV</name>
        <name evidence="7" type="ORF">LAX5112_00372</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64702.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670353.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00372"/>
    <dbReference type="EnsemblBacteria" id="CTQ64702">
        <property type="protein sequence ID" value="CTQ64702"/>
        <property type="gene ID" value="LAX5112_00372"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="51"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="86"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="138"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="192"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="236"/>
            <end position="253"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="284"/>
            <end position="306"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="321"/>
            <end position="346"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="367"/>
            <end position="386"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="398"/>
            <end position="420"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="456"/>
            <end position="477"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="513"/>
            <end position="536"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="48"/>
            <end position="254"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="325"/>
            <end position="531"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ64702.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="549" mass="59091" checksum="2740E5D235BDEE54" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRV7</accession>
    <name>A0A0M6ZRV7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Putrescine-binding periplasmic protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">potF_2</name>
        <name evidence="6" type="ORF">LAX5112_00498</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the bacterial solute-binding protein 1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65067.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670449.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00498"/>
    <dbReference type="EnsemblBacteria" id="CTQ65067">
        <property type="protein sequence ID" value="CTQ65067"/>
        <property type="gene ID" value="LAX5112_00498"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019808">
        <property type="term" value="F:polyamine binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015846">
        <property type="term" value="P:polyamine transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006059">
        <property type="entry name" value="SBP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001188">
        <property type="entry name" value="Sperm_putr-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006311">
        <property type="entry name" value="TAT_signal"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13416">
        <property type="entry name" value="SBP_bac_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00909">
        <property type="entry name" value="SPERMDNBNDNG"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0574">Periplasm</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008520"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ65067.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="379" mass="42397" checksum="65CA889CC76CB29F" modified="2015-12-09" version="1">MDNTKRYERLRERYLNGDLDRRKFLGLIGAAGLAYGVQTPFARHALAATEEVRFDGWGGVVSEAFRKHAFAPYTDKTGIKVVDGTFGGGDEYLSRVKASQEGEYNIAHLSGVFDYARYTNLGLNSTLNEDNIPNLKYVIPKLVDVFRSVTDGKLSCVPYDYGTTGIAYNRKYISDEEAKKKGAKLLIDTAYKGKIGGWSDWRTRVWYASLQTGQDPNNATDMDAVWEAVRTNRDLLLKYWQSGAELMSLLAEEEIYVTEGWSGRIYALQEQGHDIGYIDPPNGFGWQECLFVIKGSPMEACEELLNFMLAPETSIAVAEGQNYPPALDPTKVDLGSKIPTLPAFDPTGTLDGLTFANPEYWNSNEPAWNKTFSRIQKGY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRZ4</accession>
    <name>A0A0M6ZRZ4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Extracytoplasmic solute receptor protein YiaO</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">yiaO_1</name>
        <name evidence="4" type="ORF">LAX5112_00650</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the bacterial solute-binding protein 7 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65488.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670602.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00650"/>
    <dbReference type="EnsemblBacteria" id="CTQ65488">
        <property type="protein sequence ID" value="CTQ65488"/>
        <property type="gene ID" value="LAX5112_00650"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030288">
        <property type="term" value="C:outer membrane-bounded periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071702">
        <property type="term" value="P:organic substance transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.190.170">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018389">
        <property type="entry name" value="DctP_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004682">
        <property type="entry name" value="TRAP_DctP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038404">
        <property type="entry name" value="TRAP_DctP_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33376">
        <property type="entry name" value="PTHR33376"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03480">
        <property type="entry name" value="DctP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006470">
        <property type="entry name" value="DctB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00787">
        <property type="entry name" value="dctP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0675">Receptor</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005808925" evidence="3">
        <location>
            <begin position="22"/>
            <end position="346"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ65488.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="346" mass="36872" checksum="BE2F99034E0E765E" modified="2015-12-09" version="1">MKRTALTAALAASLIASTAYADGGVIRFGHDNKTDPFENPAHACTAVFNNLVTSGTNGSVSVEVFGSNQLGSAAEHVQQVRDGLLQATLTSTGALASYYPRIDVLNLPFAFNGNAATYEVFDGDFGKALAADIEVELGDVVVLGFPDTGGFFAVTNSQREIANLADFDGIRIRTMTLPSHQTIVKALGAEAYPLSWGEVYSGLQTGVIDGQMNPVPIISFANFAEVQEYLTLTNHLFSPYTFLMNRAFYEGLSDSEKATVHTAAENCVAASRGLSRIIEASDRGLAGLADDIKVTALSDDQRAEMAAATQPAFETHVAENLDPKANELLVKFRDAVNKANEASYLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZS42</accession>
    <name>A0A0M6ZS42_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Biopolymer transport protein ExbD/TolR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">LAX5112_00691</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cell membrane</location>
            <topology evidence="6">Single-pass type II membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the ExbD/TolR family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65599.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670633.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00691"/>
    <dbReference type="EnsemblBacteria" id="CTQ65599">
        <property type="protein sequence ID" value="CTQ65599"/>
        <property type="gene ID" value="LAX5112_00691"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015031">
        <property type="term" value="P:protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003400">
        <property type="entry name" value="ExbD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02472">
        <property type="entry name" value="ExbD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0653">Protein transport</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="12"/>
            <end position="33"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005811"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003879"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ65599.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="130" mass="13776" checksum="2C50C04286278561" modified="2015-12-09" version="1">MITLPRKTEKRPLETTISLINIVFLMLIFFLVAGQLAPPLDGQVDLAKSEEATPLPPPDALYARADGLLVHRDAEITAEAFLGSQAPTGDGIVRLGADAALPVDKLLDHVAALYAAGAVKVLIVTRKADP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSR5</accession>
    <name>A0A0M6ZSR5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Phenylserine dehydratase</fullName>
            <ecNumber evidence="4">4.2.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">psdht</name>
        <name evidence="4" type="ORF">LAX5112_00768</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <dbReference type="EC" id="4.2.1.-" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65819.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670692.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00768"/>
    <dbReference type="EnsemblBacteria" id="CTQ65819">
        <property type="protein sequence ID" value="CTQ65819"/>
        <property type="gene ID" value="LAX5112_00768"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1100">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001926">
        <property type="entry name" value="PLP-dep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036052">
        <property type="entry name" value="Trypto_synt_PLP_dependent"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00291">
        <property type="entry name" value="PALP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53686">
        <property type="entry name" value="SSF53686"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0456">Lyase</keyword>
    <keyword evidence="2" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PALP" evidence="3">
        <location>
            <begin position="24"/>
            <end position="311"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00291"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ65819.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="323" mass="34673" checksum="A0C62E50948627CF" modified="2015-12-09" version="1">MKTDALNSYIPTLEDMLVAHERIKPHVHRTPVLTSSFLNDLTGAELFFKCENFQKAGAFKVRGASNAVFGLDEETAKSGVATHSSGNHALSLSYAAGRRGIPCHVVMPRTAPQAKKDAVRGYGGIITECEPSTSSREAVFTEVEKKTGAEFVHPYNDPRVIAGQGTCSKELMEQTDGLDMVIAPIGGGGMVSGTCLTLSNLAPGVKIFAAEPEQADDAARSFRAGHIIADDAPNTVADGLKVPLKDLTWHFVSNYVSDVLTASEQEIVEAMRLTWARMKIVMEPSSAVPLATILKNKHIFAGKRVGVIITGGNVDLNKLPWTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSS2</accession>
    <name>A0A0M6ZSS2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Permeases</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00759</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65795.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670683.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00759"/>
    <dbReference type="EnsemblBacteria" id="CTQ65795">
        <property type="protein sequence ID" value="CTQ65795"/>
        <property type="gene ID" value="LAX5112_00759"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="47"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="82"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="113"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="148"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="174"/>
            <end position="193"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="200"/>
            <end position="219"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="239"/>
            <end position="262"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="320"/>
            <end position="338"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="344"/>
            <end position="362"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="374"/>
            <end position="391"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="431"/>
            <end position="452"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="459"/>
            <end position="479"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="485"/>
            <end position="505"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65795.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="527" mass="55325" checksum="6B62774DD6E1024B" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSY2</accession>
    <name>A0A0M6ZSY2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Aliphatic sulfonates import ATP-binding protein SsuB</fullName>
            <ecNumber evidence="6">3.6.3.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">ssuB_2</name>
        <name evidence="6" type="ORF">LAX5112_00617</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.-" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65427.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670573.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00617"/>
    <dbReference type="EnsemblBacteria" id="CTQ65427">
        <property type="protein sequence ID" value="CTQ65427"/>
        <property type="gene ID" value="LAX5112_00617"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015416">
        <property type="term" value="F:ABC-type phosphonate transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="14"/>
            <end position="258"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="48"/>
            <end position="55"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ65427.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="258" mass="27732" checksum="2B7F063078C6DCDD" modified="2015-12-09" version="1">MLHTPPADTKDVAIATSALKKQYKNGQVPVLKGVDLTIRHGERVALIGSNGSGKSTLLKCLIGLHAVNEGSVQTLGETFGSMPNAAQRAQLRKQTGFVFQKHCLVKRHSVLSNVVHGMLGLPGSWRAFTQATAPSNWRAKAMSALDDVNLADKARSRADALSGGQQQRVAIARAIVRGPRLIIADEPAASLDPVAGTEVMRLFSELAQAHGITLLFTSHDMEHAAAYSDRTVALKDGQILFDKASCEVCDQDLRDTFQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTY3</accession>
    <name>A0A0M6ZTY3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Putative transcriptional regulatory protein pdtaR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">pdtaR</name>
        <name evidence="4" type="ORF">LAX5112_00441</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64903.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670401.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00441"/>
    <dbReference type="EnsemblBacteria" id="CTQ64903">
        <property type="protein sequence ID" value="CTQ64903"/>
        <property type="gene ID" value="LAX5112_00441"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005561">
        <property type="entry name" value="ANTAR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008327">
        <property type="entry name" value="Sig_transdc_resp-reg_antiterm"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03861">
        <property type="entry name" value="ANTAR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF036382">
        <property type="entry name" value="RR_antiterm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01012">
        <property type="entry name" value="ANTAR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50921">
        <property type="entry name" value="ANTAR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="2">
        <location>
            <begin position="6"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="domain" description="ANTAR" evidence="3">
        <location>
            <begin position="126"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="1">
        <location>
            <position position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50921"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ64903.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="195" mass="21831" checksum="A31C5EF52CF9E78E" modified="2015-12-09" version="1">MRGGLSILVIDDNKIRASIIEEGLRDAGHEKVILVHQMEGLVRQIAEINPDVIVIDLENPNRDRLEHMFQVSRAVQRPIAMFVDKADSQSIEAAVDAGVSAYIVDGLKRERVKPILDMAISRFRAFSKLTQDLEDARNELADRKTIDRAKGILMKSKNLTEQEAYDLLRKTAMNQSRKIIEVAQSLVIASGLLGD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZU21</accession>
    <name>A0A0M6ZU21_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Leucine/isoleucine/valine transporter permease subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_00920</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66238.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670804.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00920"/>
    <dbReference type="EnsemblBacteria" id="CTQ66238">
        <property type="protein sequence ID" value="CTQ66238"/>
        <property type="gene ID" value="LAX5112_00920"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015658">
        <property type="term" value="F:branched-chain amino acid transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06581">
        <property type="entry name" value="TM_PBP1_LivM_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001851">
        <property type="entry name" value="ABC_transp_permease"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043428">
        <property type="entry name" value="LivM-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30482">
        <property type="entry name" value="PTHR30482"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02653">
        <property type="entry name" value="BPD_transp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="15"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="46"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="96"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="123"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="182"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="234"/>
            <end position="255"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="270"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="302"/>
            <end position="321"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="327"/>
            <end position="348"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ66238.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="353" mass="37932" checksum="F4BA3E788CF3B359" modified="2015-12-09" version="1">MLIKLLSGDTPRSGLLAVLLLVILISLAFAPFLFPGTRSLETAAKICIFIVLVASYDLLLGYAGIVSFAHTMFFGIGAYGTALALSTTGPTYGSMIWGTAAGAIVAAVFALAIGLFSLRVKAIFFAMVTLAVASAFAVLVSQLSWLTGGEDGLNYSIPREFKPAFKLVDEKIFDVRINGKLLLYYLVFFASLILFLTMLRIVNSPFGRTLKAVRDNAFRAEAIGYRVVWYRTTATVLSAVMAALAGSLLAIWLRYTGPATTLSMEIMIDILLMVVIGGMGTLYGAVIGATIFILAQTYLQNLMGVAAEATSAIPLVSTLVAPERWLLWLGVLFILSVYFFPSGIVGRLRAGRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUI1</accession>
    <name>A0A0M6ZUI1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Photosystem I assembly protein Ycf3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_00535</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65174.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00535"/>
    <dbReference type="EnsemblBacteria" id="CTQ65174">
        <property type="protein sequence ID" value="CTQ65174"/>
        <property type="gene ID" value="LAX5112_00535"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_repeat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014596">
        <property type="entry name" value="UCP035836"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF035836">
        <property type="entry name" value="UCP035836"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00028">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="SSF48452"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50005">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0802">TPR repeat</keyword>
    <feature type="repeat" description="TPR" evidence="1">
        <location>
            <begin position="152"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="43"/>
            <end position="63"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00339"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ65174.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="268" mass="29173" checksum="3D6ECD5FBFBD2C0E" modified="2015-12-09" version="1">MLRTARILTMQAPSTHSATKRSRLTKTLMAMTALVLVTGCASNKSNTGTHSPASGTHYSNPGSAQARAAVSKWGSAYERDRTNRMAILGYSDALSRNGQTPQAMAVLRGGVIAHPKDREIASAYGKVLAMNGRFDEAMNVLKGAQRPDTPDWKLMSAKAAIYDQMGEHKKARSIYKQALQIAPDDPSLLNNLGLSYLLSNELPDAEYTLRRAATLPGADSRVRQNLALVLGIQGKYDEAIQVARAELDPRQAEANIAYLRSMMQQRQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUR6</accession>
    <name>A0A0M6ZUR6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">2-(Hydroxymethyl)glutarate dehydrogenase</fullName>
            <ecNumber evidence="4">1.1.1.291</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">Hgd</name>
        <name evidence="4" type="ORF">LAX5112_00827</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.1.1.291" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65982.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670733.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00827"/>
    <dbReference type="EnsemblBacteria" id="CTQ65982">
        <property type="protein sequence ID" value="CTQ65982"/>
        <property type="gene ID" value="LAX5112_00827"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043718">
        <property type="term" value="F:2-hydroxymethylglutarate dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050661">
        <property type="term" value="F:NADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016054">
        <property type="term" value="P:organic acid catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1040.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008927">
        <property type="entry name" value="6-PGluconate_DH-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013328">
        <property type="entry name" value="6PGD_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006115">
        <property type="entry name" value="6PGDH_NADP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015815">
        <property type="entry name" value="HIBADH-related"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029154">
        <property type="entry name" value="NADP-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14833">
        <property type="entry name" value="NAD_binding_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03446">
        <property type="entry name" value="NAD_binding_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000103">
        <property type="entry name" value="HIBADH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48179">
        <property type="entry name" value="SSF48179"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NAD_binding_2" evidence="2">
        <location>
            <begin position="3"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="domain" description="NAD_binding_11" evidence="3">
        <location>
            <begin position="164"/>
            <end position="272"/>
        </location>
    </feature>
    <feature type="active site" evidence="1">
        <location>
            <position position="170"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRSR" id="PIRSR000103-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF03446"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF14833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ65982.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="324" mass="33870" checksum="7B9DB355FEAC57C7" modified="2015-12-09" version="1">MHVGFIGLGNVGGKLAGSIVRNGFDLTVLDLDENLMAKFAAFGAKKGISPRQLAEDCDVVITCLPSPTACAAVVEGPDGILEGIGPGTIWAEMSTTDASEVKRLAGLVAEKGGEAIECPVSGGCHRAATGNISIFAGCSRETFEKALPFLTVLGRRVLHTGDIGSASVLKVVTNYLATANLVSVCEALTTCKAAGMELNTAYEAIKISSGTSFVHETEGQVILNGSRDISFTMDLVAKDIGLFQSIAEEHSVPLELSPLLNQIFADGISRYGPRELSPNIIKRLEDATGLSVLGDGFPAEMEDDEPEEPGYEVRPTAAVAIAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZV79</accession>
    <name>A0A0M6ZV79_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00604</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65373.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00604"/>
    <dbReference type="EnsemblBacteria" id="CTQ65373">
        <property type="protein sequence ID" value="CTQ65373"/>
        <property type="gene ID" value="LAX5112_00604"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005808983" evidence="1">
        <location>
            <begin position="36"/>
            <end position="112"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65373.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="112" mass="12338" checksum="B111765232CE749C" modified="2015-12-09" version="1">MARHFRSISKRFWSRAVPAVTALVATAILTLPADAQSRRANSTSLTCAQAQSLIAQRGAVLMNTGPNTFDRYVNDRGSCQVNEYAKTDFIPTKDKKKCSVKRCESITPFSVP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVF8</accession>
    <name>A0A0M6ZVF8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Stress responsive A/B Barrel Domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00907</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66202.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670792.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ66202">
        <property type="protein sequence ID" value="CTQ66202"/>
        <property type="gene ID" value="LAX5112_00907"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013097">
        <property type="entry name" value="Dabb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07876">
        <property type="entry name" value="Dabb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00886">
        <property type="entry name" value="Dabb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51502">
        <property type="entry name" value="S_R_A_B_BARREL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Stress-response A/B barrel" evidence="1">
        <location>
            <begin position="2"/>
            <end position="100"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51502"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66202.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="103" mass="10828" checksum="3A5D48A583870E49" modified="2015-12-09" version="1">MLQHFVLLSLKDPDNLSVLDEPMALISGLVDKLSGVLSVTHGPNLDLEGKSKPFQYGFIVTVSSEAVLADYAPHPDHQKAAAMLIAACEGGADGILVADIRCG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVI8</accession>
    <name>A0A0M6ZVI8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">5'-deoxynucleotidase</fullName>
            <ecNumber evidence="5">3.1.3.89</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_01088</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>a 2'-deoxyribonucleoside 5'-phosphate + H2O = a 2'-deoxyribonucleoside + phosphate</text>
            <dbReference type="Rhea" id="RHEA:36167"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:18274"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:65317"/>
            <dbReference type="EC" id="3.1.3.89"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="3">
            <name>Co(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:48828"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="4">Homodimer.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.89" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66775.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670956.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01088"/>
    <dbReference type="EnsemblBacteria" id="CTQ66775">
        <property type="protein sequence ID" value="CTQ66775"/>
        <property type="gene ID" value="LAX5112_01088"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0002953">
        <property type="term" value="F:5'-deoxynucleotidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003607">
        <property type="entry name" value="HD/PDEase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006674">
        <property type="entry name" value="HD_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039356">
        <property type="entry name" value="YfbR/HDDC2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11845">
        <property type="entry name" value="PTHR11845"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13023">
        <property type="entry name" value="HD_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00471">
        <property type="entry name" value="HDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HDc" evidence="6">
        <location>
            <begin position="44"/>
            <end position="161"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001638"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00001941"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012964"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM00471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ66775.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="207" mass="23338" checksum="CCD18C72A0E3CF7E" modified="2015-12-09" version="1">MNSKSNGNHAPFIDHGRLTGLLAFFQAAEQLKDTLRSGTSRSGRAESTAEHSWRLCLMVLLFEKDIVGVDIKKLLKLCVLHDLGEAISGDVPAPHQSDGDNRQERERRDFQALCADLPDDVASDFMVLWDEYADAVTPEAQLAKAFDKLETMLQHQLMPAADADFHAFNLSYGRDRTEVFPLTRQIRERVDARTKELIKDRKSVQNA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZW27</accession>
    <name>A0A0M6ZW27_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00958</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66412.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00958"/>
    <dbReference type="EnsemblBacteria" id="CTQ66412">
        <property type="protein sequence ID" value="CTQ66412"/>
        <property type="gene ID" value="LAX5112_00958"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd06661">
        <property type="entry name" value="GGCT_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013024">
        <property type="entry name" value="GGCT-like"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ66412.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="197" mass="22400" checksum="01DB1A957C99DE7C" modified="2015-12-09" version="1">MITITYFGYGSLVNAATVPDGAEIVPGRLKGWVREWRVCGVWENGQGRCALSVRQEPGSEIRGVMTREQQSRLHALEQRESRYEKIGQIGTSFRCEAESKPGPEELFLFKATPENERWGCDRHPILQSYLDCVLAGFHQIWGEEGVSHFFDTTDGWHVPVLKDRAAPLYPRAVEIDTKLLQLFDDHVERQNLTLISA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWJ3</accession>
    <name>A0A0M6ZWJ3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Homoprotocatechuate degradation operon regulator, HpaR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01016</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66572.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ66572">
        <property type="protein sequence ID" value="CTQ66572"/>
        <property type="gene ID" value="LAX5112_01016"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000835">
        <property type="entry name" value="HTH_MarR-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12802">
        <property type="entry name" value="MarR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00598">
        <property type="entry name" value="HTHMARR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00347">
        <property type="entry name" value="HTH_MARR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50995">
        <property type="entry name" value="HTH_MARR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH marR-type" evidence="1">
        <location>
            <begin position="1"/>
            <end position="141"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66572.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="148" mass="16403" checksum="34303F04AF1A3B62" modified="2015-12-09" version="1">MEDICTINALRLMQSADEFRAKLSGEFSAVHGLSVNEYLLLMHLQRAPLNRLSRVELAKRMYVSASTVTRMVAPMEKLGLVTREADNRDARLAYVVLANAGATRLGEAKVTFAKHARDAFGDRWAMAELESLSKLLNRLVAGTLPNLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWW0</accession>
    <name>A0A0M6ZWW0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">NYN domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01056</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66682.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008196956.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01056"/>
    <dbReference type="EnsemblBacteria" id="CTQ66682">
        <property type="protein sequence ID" value="CTQ66682"/>
        <property type="gene ID" value="LAX5112_01056"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004540">
        <property type="term" value="F:ribonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021139">
        <property type="entry name" value="NYN_MARF1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01936">
        <property type="entry name" value="NYN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NYN" evidence="2">
        <location>
            <begin position="7"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="169"/>
            <end position="196"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ66682.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="196" mass="22418" checksum="B8844659905E5E3D" modified="2015-12-09" version="1">MFDAREKVALFIDGANLYSTAKAIGFDIDYKRLLKEFQGQAYLLRAYYYTALIEDQEYSSIRPLIDWLDYNGYKVITKPVKEFVDSAGRRKVKGNMDIELAVDAMELVESVDHIVLFSGDGDFRSLVEALQRKGRKVSVVSTLKTQPPMIADDLRRQADHFIDLASLANKIGRDPSERPQRPPMPEIDDEDDDDDY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZX91</accession>
    <name>A0A0M6ZX91_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Periplasmic serine endoprotease DegP-like</fullName>
            <ecNumber evidence="5">3.4.21.107</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">degP1_1</name>
        <name evidence="8" type="ORF">LAX5112_01355</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 5">
            <text>Acts on substrates that are at least partially unfolded. The cleavage site P1 residue is normally between a pair of hydrophobic residues, such as Val-|-Val.</text>
            <dbReference type="EC" id="3.4.21.107"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the peptidase S1C family.</text>
    </comment>
    <dbReference type="EC" id="3.4.21.107" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67369.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671164.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01355"/>
    <dbReference type="EnsemblBacteria" id="CTQ67369">
        <property type="protein sequence ID" value="CTQ67369"/>
        <property type="gene ID" value="LAX5112_01355"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004252">
        <property type="term" value="F:serine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.42.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001478">
        <property type="entry name" value="PDZ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036034">
        <property type="entry name" value="PDZ_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011782">
        <property type="entry name" value="Pept_S1C_Do"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009003">
        <property type="entry name" value="Peptidase_S1_PA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001940">
        <property type="entry name" value="Peptidase_S1C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006311">
        <property type="entry name" value="TAT_signal"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13180">
        <property type="entry name" value="PDZ_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00834">
        <property type="entry name" value="PROTEASES2C"/>
    </dbReference>
    <dbReference type="SMART" id="SM00228">
        <property type="entry name" value="PDZ"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50156">
        <property type="entry name" value="SSF50156"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50494">
        <property type="entry name" value="SSF50494"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02037">
        <property type="entry name" value="degP_htrA_DO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50106">
        <property type="entry name" value="PDZ"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5 8" id="KW-0645">Protease</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <keyword evidence="5" id="KW-0720">Serine protease</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="5" id="KW-0346">Stress response</keyword>
    <feature type="domain" description="PDZ" evidence="7">
        <location>
            <begin position="290"/>
            <end position="361"/>
        </location>
    </feature>
    <feature type="domain" description="PDZ" evidence="7">
        <location>
            <begin position="410"/>
            <end position="481"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="109"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="active site" description="Charge relay system" evidence="4">
        <location>
            <position position="148"/>
        </location>
    </feature>
    <feature type="active site" description="Charge relay system" evidence="4">
        <location>
            <position position="178"/>
        </location>
    </feature>
    <feature type="active site" description="Charge relay system" evidence="4">
        <location>
            <position position="251"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001772"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR611782-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU364067"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50106"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ67369.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="509" mass="53878" checksum="864BCE1E2242AC29" modified="2015-12-09" version="1">MENRRSSSPLRSRRAKLLAGAVVLGAAGLMTVQTIVPAQLAQATPVRIDNAAPADFSDVVGAVSPAVVSVQVKQAAEPRMMNFNGGNNFRDFFEDLPNGHPFERFFRDFGERGGEEGRPQRPAPRQYGMSQGSGFFISADGFVVTNQHVIDKGTEFTVIDHEGEEYDAVLIGADKRTDLALLKIDGGKDFTYVDFADEAPEVGEWTVAIGNPFGLGGSVTAGIVSARGRDIGAGPYDDFIQIDAPVNRGNSGGPAFNMNGEVIGVNAAIFSPSGGNVGIAFAIPASTAQDVIMELKDDGTVVRGWLGVQIQNVTDDIAESLGLDEAHGAIVSEAQEGSPAAKAGLRSGDTILEVEGAKVDGPRDLSKIIAAYDPDTSVEITVWRDGKEQDIDVTLGRLQDQQQAAAEPEAVEQQKTSLDDMGLVLTSKTDAGLDGNGVLIADIDPDSPASEKRLSRGDVILEVAGMPVNSPEDVIKAVKKAEEDGRKAVLFRVESNDNTRFVALPMNLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXP5</accession>
    <name>A0A0M6ZXP5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">SH3b domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_01097</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66800.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01097"/>
    <dbReference type="EnsemblBacteria" id="CTQ66800">
        <property type="protein sequence ID" value="CTQ66800"/>
        <property type="gene ID" value="LAX5112_01097"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003646">
        <property type="entry name" value="SH3-like_bac-type"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08239">
        <property type="entry name" value="SH3_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809030" description="SH3b domain-containing protein" evidence="2">
        <location>
            <begin position="26"/>
            <end position="886"/>
        </location>
    </feature>
    <feature type="domain" description="SH3b" evidence="3">
        <location>
            <begin position="33"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="762"/>
            <end position="886"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="769"/>
            <end position="809"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="847"/>
            <end position="867"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF08239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ66800.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="886" mass="96065" checksum="A040B7AEFAFE1B73" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXX4</accession>
    <name>A0A0M6ZXX4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01227</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67137.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671066.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67137">
        <property type="protein sequence ID" value="CTQ67137"/>
        <property type="gene ID" value="LAX5112_01227"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="98"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="108"/>
            <end position="130"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67137.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="130" mass="13663" checksum="DB1D0B0E822EA178" modified="2015-12-09" version="1">MTNVTSKYEGPLGLPGGPVIPAGGTVLVEKWDIIKEHQVVKAWRDAGVIFAEEPEDTADNTDKDAEKAQKDLLIAELAELGIEKNRRSSLETLQEALDAAKAAAQGQESGSGEGSDDGSATDQQNGSQGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZY81</accession>
    <name>A0A0M6ZY81_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Putative glutamine ABC transporter permease protein GlnM</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">glnM_2</name>
        <name evidence="10" type="ORF">LAX5112_01291</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="8">Cell membrane</location>
            <topology evidence="8">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67251.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01291"/>
    <dbReference type="EnsemblBacteria" id="CTQ67251">
        <property type="protein sequence ID" value="CTQ67251"/>
        <property type="gene ID" value="LAX5112_01291"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006865">
        <property type="term" value="P:amino acid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010065">
        <property type="entry name" value="AA_ABC_transptr_permease_3TM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043429">
        <property type="entry name" value="ArtM/GltK/GlnP/TcyL/YhdX-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30614">
        <property type="entry name" value="PTHR30614"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01726">
        <property type="entry name" value="HEQRo_perm_3TM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0029">Amino-acid transport</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="8" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="33"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="65"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="98"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="135"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="160"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="200"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="9">
        <location>
            <begin position="29"/>
            <end position="221"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ67251.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="241" mass="26079" checksum="8389B20F29E73C13" modified="2015-12-09" version="1">MEGRAVKDLFVSLLGKPFGIVVFQLLEATQFTIYLSLIAFLGGGLIGVCVTAIRVSPMSGLRTVFAAYTWLFQSVPLLMLLFLLGLGMPRLFAIQVDPWFAAGLALTLYTSAYLSEVWRGAITSVPLGQHEGGRALGLAFAQIMILIILPQAFRLAIAPTVGFMVQIIKGTSLAYIIGFHDLMAIGKRWANSPVPGTQPFVIYPMMAMIYFSLCYPLSLWARHLEKRLGSTSSKGGAAAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZY96</accession>
    <name>A0A0M6ZY96_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Conjugative transfer relaxase protein TraI</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01249</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67176.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671085.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67176">
        <property type="protein sequence ID" value="CTQ67176"/>
        <property type="gene ID" value="LAX5112_01249"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="113"/>
            <end position="133"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67176.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="364" mass="40735" checksum="A6C41617351AEA0A" modified="2015-12-09" version="1">MSRPDDTEFIVGQLKDRIEQLLDQYSPGWVAHKGAAYLAPKSQKALGSFKVNLTGGRRGEWYRFSQGFGGGPVSLLAYLLNGCTSEPSKSDLAAAFKEARVFLGLDQGEVDQDAAKRAQERRKKAERDHQKKEAKARVYREELAMDLWQSCRVPEETIAEVNFRNRVKGWDGFHTDQIRFHPEAFYTKDLKLPCVVCLVTGPDGNPVGVWRIYLNKDGSNYRDETGKKVKKGLGPCMETGGAIRLQPATTGTIGACEGVESGYGAWNLAAREIPIWPMMATSGMVNFQPPFGISRVIGFPDGDRDFDANKQTFREPPGLKAWRSLEERMRSEMIATATFPTRFDGTDPLEVWNDFYDRFGEVAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYD5</accession>
    <name>A0A0M6ZYD5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01526</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67805.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01526"/>
    <dbReference type="EnsemblBacteria" id="CTQ67805">
        <property type="protein sequence ID" value="CTQ67805"/>
        <property type="gene ID" value="LAX5112_01526"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028994">
        <property type="entry name" value="Integrin_alpha_N"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69318">
        <property type="entry name" value="SSF69318"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="43"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67805.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="308" mass="33357" checksum="F03C20CAE40D73C2" modified="2015-12-09" version="1">MDPHGLAPLVSGFFWLSRDTWMTVTACLKLLMLPAVLIGALAMKDSAAAQDRLPDGDVAKLHHNGTAYAAWYGTPTDRYGHAILGDGIEGGSLHLKVGDKAYAVILPQDKVFEDRTPRIVDLNGDGQPEIVTIRAFLSAGASVAIYGLQGDQLVELASSRPIGRMNRWLNIAGIADYLGTGQKQIAFVETPHIGGTLQIVRWQGNKLKLTHALRGFSNHKIGAREQNLSATVYANDQALPYVILPSNNRKILHIVGYRDGKIESLGQKALAAPVARKVPRAQTEADCAAFELENGERTQMCASDINAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYE4</accession>
    <name>A0A0M6ZYE4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 3">Methionine aminopeptidase</fullName>
            <shortName evidence="2">MAP</shortName>
            <shortName evidence="2">MetAP</shortName>
            <ecNumber evidence="2 3">3.4.11.18</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="2">Peptidase M</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="2 5" type="primary">map</name>
        <name evidence="5" type="ORF">LAX5112_01474</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 2">Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2 3">
            <text>Release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.</text>
            <dbReference type="EC" id="3.4.11.18"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 3">
            <name>Co(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:48828"/>
        </cofactor>
        <cofactor evidence="2 3">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <cofactor evidence="2 3">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
        <cofactor evidence="2 3">
            <name>Fe(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29033"/>
        </cofactor>
        <text evidence="2 3">Binds 2 divalent metal cations per subunit. Has a high-affinity and a low affinity metal-binding site. The true nature of the physiological cofactor is under debate. The enzyme is active with cobalt, zinc, manganese or divalent iron ions. Most likely, methionine aminopeptidases function as mononuclear Fe(2+)-metalloproteases under physiological conditions, and the catalytically relevant metal-binding site has been assigned to the histidine-containing high-affinity site.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Monomer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.</text>
    </comment>
    <dbReference type="EC" id="3.4.11.18" evidence="2 3"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67669.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008195120.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01474"/>
    <dbReference type="EnsemblBacteria" id="CTQ67669">
        <property type="protein sequence ID" value="CTQ67669"/>
        <property type="gene ID" value="LAX5112_01474"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070006">
        <property type="term" value="F:metalloaminopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046914">
        <property type="term" value="F:transition metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070084">
        <property type="term" value="P:protein initiator methionine removal"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01086">
        <property type="entry name" value="MetAP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01974">
        <property type="entry name" value="MetAP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036005">
        <property type="entry name" value="Creatinase/aminopeptidase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000994">
        <property type="entry name" value="Pept_M24"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001714">
        <property type="entry name" value="Pept_M24_MAP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002467">
        <property type="entry name" value="Pept_M24A_MAP1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00557">
        <property type="entry name" value="Peptidase_M24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00599">
        <property type="entry name" value="MAPEPTIDASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55920">
        <property type="entry name" value="SSF55920"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00500">
        <property type="entry name" value="met_pdase_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00680">
        <property type="entry name" value="MAP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3 5" id="KW-0031">Aminopeptidase</keyword>
    <keyword evidence="2 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2 3" id="KW-0645">Protease</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidase_M24" evidence="4">
        <location>
            <begin position="28"/>
            <end position="255"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="93"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="110"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="121"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="184"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
            <label>2</label>
            <note>catalytic</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="191"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="217"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
            <label>2</label>
            <note>catalytic</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="248"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002521"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU003653"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00557"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ67669.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="276" mass="30085" checksum="5892CBADB2AEACDD" modified="2015-12-09" version="1">MVTYIDAADAPMKNTGQVRLYGPEDFDGMMKAGQLTASCLDELADMVKPGVTTQEIDDFVYQYGMDHNAIPATLNYRGYTKSSCTSINHVVCHGIPNNKALREGDIVNIDVTYILDGWHGDSSRMYPVGPLKRAAERLIDVTYESLMRGIEAAKPGNTTGDIGAAIQTYVEAQRCSVVRDFCGHGLGRLFHDTPNILHYGRPGEGVELKPGMIFTIEPMVNLGRPNVKVLSDGWTAVTRDRSLSAQFEHSIGITADGCQSFTTSPKGFHKPGLPNA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYN0</accession>
    <name>A0A0M6ZYN0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Transcriptional repressor NrdR</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8 12" type="primary">nrdR</name>
        <name evidence="12" type="ORF">LAX5112_01038</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR-boxes.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="8">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="8">Binds 1 zinc ion.</text>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the NrdR family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66633.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670927.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01038"/>
    <dbReference type="EnsemblBacteria" id="CTQ66633">
        <property type="protein sequence ID" value="CTQ66633"/>
        <property type="gene ID" value="LAX5112_01038"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045892">
        <property type="term" value="P:negative regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00440">
        <property type="entry name" value="NrdR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005144">
        <property type="entry name" value="ATP-cone_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003796">
        <property type="entry name" value="RNR_NrdR-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30455">
        <property type="entry name" value="PTHR30455"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03477">
        <property type="entry name" value="ATP-cone"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00244">
        <property type="entry name" value="TIGR00244"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51161">
        <property type="entry name" value="ATP_CONE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 8 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6 8" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2 8 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 8" id="KW-0678">Repressor</keyword>
    <keyword evidence="7 8" id="KW-0804">Transcription</keyword>
    <keyword evidence="5 8" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="8" id="KW-0862">Zinc</keyword>
    <keyword evidence="3 8" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="ATP-cone" evidence="11">
        <location>
            <begin position="49"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="zinc finger region" evidence="8">
        <location>
            <begin position="3"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00440"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00492"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS51161"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ66633.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="158" mass="18068" checksum="8F83296128698C80" modified="2015-12-09" version="1">MKCPFCGGEETQVKDSRPTEDNTAIRRRRICNTCGGRYTTFERVQLRELMVLKRSGRRVPFDREKLVRSVQIAVRKRPVDPERIERMVSGIVRQLESSGESEITAETIGNHVMEGLKGVDDVAYVRFASVYKNFREAKDFEALLDELSDPVTPVSDKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYR6</accession>
    <name>A0A0M6ZYR6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">RDD family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_01052</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66673.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670935.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01052"/>
    <dbReference type="EnsemblBacteria" id="CTQ66673">
        <property type="protein sequence ID" value="CTQ66673"/>
        <property type="gene ID" value="LAX5112_01052"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010432">
        <property type="entry name" value="RDD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06271">
        <property type="entry name" value="RDD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="32"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="65"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="110"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="domain" description="RDD" evidence="6">
        <location>
            <begin position="29"/>
            <end position="151"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF06271"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ66673.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="171" mass="18853" checksum="B681B61F15E823C5" modified="2015-12-09" version="1">MSADTSSRSSRQDAFDPFLQPELFEGVRSRRIIAFIIDAFVITLLTLGAGILVFILGVFTLGLGFLLYAILPVSVALIYAAFTLGGPSASTIGMRAMGLEMRLWYDAKPYPLLAAVHLLLFWFSISLLTPFVLLVSLFSDRKRLLHDLILGTVVINSAYHRAYTREHSAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYX6</accession>
    <name>A0A0M6ZYX6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01357</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67372.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671165.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01357"/>
    <dbReference type="EnsemblBacteria" id="CTQ67372">
        <property type="protein sequence ID" value="CTQ67372"/>
        <property type="gene ID" value="LAX5112_01357"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019285">
        <property type="entry name" value="DUF2336"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10098">
        <property type="entry name" value="DUF2336"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67372.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="333" mass="36836" checksum="5EFFB68B611B14F3" modified="2015-12-09" version="1">MDDSLLKLAKASSSQKKHELAAHMTGLLAVRDEATTSSEETKLLNSMLEGVYTSLGDDAKQEMSDKLADVSAMSSTLAAALANEEIPIARAVLERSTSLSEADIVKLAQTKGQDFLLALAKRDHVSKDVTKILISRGDKDVKQTVACNLGAEIEMPEFEALVKDMPKQMGDRIRHLRKSNEELLEDLFKDDGEIAAGSELQRRPSKISPKAWVMGIKMGKTTLNKAVYQCSVEHNLFDVVALLSFFSGMQLKYVHNLMVRFDSTGIATICRATGLGAKEFQAICKERCKHLKFPESTGSKWLTNYHMLDDTDARRLLNLMKIKLKATERAEAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A005</accession>
    <name>A0A0M7A005_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Putative NAD(P)H nitroreductase</fullName>
            <ecNumber evidence="2">1.-.-.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">ydjA</name>
        <name evidence="6" type="ORF">LAX5112_01440</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="3">
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </cofactor>
        <text evidence="3">Binds 1 FMN per subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the nitroreductase family.</text>
    </comment>
    <dbReference type="EC" id="1.-.-.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67580.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671266.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01440"/>
    <dbReference type="EnsemblBacteria" id="CTQ67580">
        <property type="protein sequence ID" value="CTQ67580"/>
        <property type="gene ID" value="LAX5112_01440"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd02135">
        <property type="entry name" value="YdjA-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.109.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029479">
        <property type="entry name" value="Nitroreductase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000415">
        <property type="entry name" value="Nitroreductase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026021">
        <property type="entry name" value="YdjA-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00881">
        <property type="entry name" value="Nitroreductase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000232">
        <property type="entry name" value="YdjA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55469">
        <property type="entry name" value="SSF55469"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="2 3" id="KW-0288">FMN</keyword>
    <keyword evidence="2" id="KW-0520">NAD</keyword>
    <keyword evidence="2" id="KW-0521">NADP</keyword>
    <keyword evidence="2 6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nitroreductase" evidence="5">
        <location>
            <begin position="27"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="174"/>
            <end position="198"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="18"/>
            <end position="20"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="45"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
            <note>ligand shared between dimeric partners</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="49"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
            <note>ligand shared between dimeric partners</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="143"/>
            <end position="145"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007118"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRNR" id="PIRNR000232"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR000232-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00881"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ67580.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="198" mass="21814" checksum="91D8DAC88E027581" modified="2015-12-09" version="1">MSEFGRGSPQTLEFLRTRRSHPSVTMSAPGPDDAQLTDLLTIAARVPDHGKLAPWRFITYRALQGEKIGAFLSELYARKNGPLDEAQTDKERTRFTRAPVVVGVVSQAAEHPKIPIWEQQLSAGAVCMALVSAAAAAGFASQWLTEWYAFDEEAGRYLGLQDGERFAGFIHIGTATQPPVERPRPDLSEITSNWTETD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1L1</accession>
    <name>A0A0M7A1L1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">23S rRNA (Guanosine-2'-O-)-methyltransferase RlmB</fullName>
            <ecNumber evidence="6">2.1.1.185</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">rlmB</name>
        <name evidence="6" type="ORF">LAX5112_01702</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.1.1.185" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68342.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671473.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01702"/>
    <dbReference type="EnsemblBacteria" id="CTQ68342">
        <property type="protein sequence ID" value="CTQ68342"/>
        <property type="gene ID" value="LAX5112_01702"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008173">
        <property type="term" value="F:RNA methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006396">
        <property type="term" value="P:RNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1280.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029028">
        <property type="entry name" value="Alpha/beta_knot_MTases"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029064">
        <property type="entry name" value="L30e-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004441">
        <property type="entry name" value="rRNA_MeTrfase_TrmH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001537">
        <property type="entry name" value="SpoU_MeTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013123">
        <property type="entry name" value="SpoU_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029026">
        <property type="entry name" value="tRNA_m1G_MTases_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46429">
        <property type="entry name" value="PTHR46429"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00588">
        <property type="entry name" value="SpoU_methylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08032">
        <property type="entry name" value="SpoU_sub_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00967">
        <property type="entry name" value="SpoU_sub_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55315">
        <property type="entry name" value="SSF55315"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75217">
        <property type="entry name" value="SSF75217"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 6" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="2 6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="SpoU_sub_bind" evidence="5">
        <location>
            <begin position="44"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="1"/>
            <end position="41"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM00967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ68342.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="275" mass="29821" checksum="66FE8904E6EABF9E" modified="2015-12-09" version="1">MTDDKKPAWKSQRHGSGNAQGRFSKTKGKPGPRRPGLPPEGPVLLYGLHTVEAAFANKDRKRLKLYATENAKNRLQERGVVIDVPVEDKRPKELDRMVTKDAVHQGMILEADPLPAYGAEHLKGARLILALDQVTDPHNVGAILRSAVALDADAVVTTERHAPEEGPVLAKSASGALDMIKHVRVKNMARFITEMKEQGFGCIALDSDGHASLEDTDFTDKTVLVLGSEGKGVRQGVREACGLLARLDMPGEIRSLNVSNAAVLSLYVARQKMGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A283</accession>
    <name>A0A0M7A283_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Protease 2</fullName>
            <ecNumber evidence="5">3.4.21.83</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ptrB</name>
        <name evidence="5" type="ORF">LAX5112_01529</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase S9A family.</text>
    </comment>
    <dbReference type="EC" id="3.4.21.83" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67813.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671330.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01529"/>
    <dbReference type="EnsemblBacteria" id="CTQ67813">
        <property type="protein sequence ID" value="CTQ67813"/>
        <property type="gene ID" value="LAX5112_01529"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004252">
        <property type="term" value="F:serine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002471">
        <property type="entry name" value="Pept_S9_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023302">
        <property type="entry name" value="Pept_S9A_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001375">
        <property type="entry name" value="Peptidase_S9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002470">
        <property type="entry name" value="Peptidase_S9A"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00326">
        <property type="entry name" value="Peptidase_S9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02897">
        <property type="entry name" value="Peptidase_S9_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00862">
        <property type="entry name" value="PROLIGOPTASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00708">
        <property type="entry name" value="PRO_ENDOPEP_SER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-0645">Protease</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidase_S9_N" evidence="4">
        <location>
            <begin position="8"/>
            <end position="417"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_S9" evidence="3">
        <location>
            <begin position="476"/>
            <end position="692"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005228"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00326"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF02897"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ67813.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="694" mass="76679" checksum="26E18BE328E18D99" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2K9</accession>
    <name>A0A0M7A2K9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Cadmium-induced protein ZinT</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">zinT</name>
        <name evidence="4" type="ORF">LAX5112_01587</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67963.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671371.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01587"/>
    <dbReference type="EnsemblBacteria" id="CTQ67963">
        <property type="protein sequence ID" value="CTQ67963"/>
        <property type="gene ID" value="LAX5112_01587"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.128.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012674">
        <property type="entry name" value="Calycin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015304">
        <property type="entry name" value="ZinT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09223">
        <property type="entry name" value="ZinT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50814">
        <property type="entry name" value="SSF50814"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0862">Zinc</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809198" evidence="2">
        <location>
            <begin position="32"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="domain" description="ZinT" evidence="3">
        <location>
            <begin position="52"/>
            <end position="229"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF09223"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ67963.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="229" mass="25662" checksum="80B607C965D37A7D" modified="2015-12-09" version="1">MKFHSSAGLLQATALKLGLAVALFAAAPVAATEKAQSKDHNHSHSHGSHSKKSEIYKGDFEDDQIENRSLSDWVGNWQSVYPYLTEGTLDPVMEHKAEHGTKTAGEYKDYYLIGYKTDVDAIEIDEDTVRFVKDSGTASGAYIYDGYEILTYKKGNRGVRYIFQKVSGDESAPEYIQFSDHKISPAAADHYHLYWGDDRAALLKEVTNWPTYYPAELTGQQIVEEMVAH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A412</accession>
    <name>A0A0M7A412_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Thioredoxin-M</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">trxA</name>
        <name evidence="6" type="ORF">LAX5112_02029</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the thioredoxin family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69222.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02029"/>
    <dbReference type="EnsemblBacteria" id="CTQ69222">
        <property type="protein sequence ID" value="CTQ69222"/>
        <property type="gene ID" value="LAX5112_02029"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015035">
        <property type="term" value="F:protein-disulfide reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005746">
        <property type="entry name" value="Thioredoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017937">
        <property type="entry name" value="Thioredoxin_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013766">
        <property type="entry name" value="Thioredoxin_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_repeat"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00085">
        <property type="entry name" value="Thioredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="SSF48452"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01068">
        <property type="entry name" value="thioredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00194">
        <property type="entry name" value="THIOREDOXIN_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51352">
        <property type="entry name" value="THIOREDOXIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50005">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="3" id="KW-0676">Redox-active center</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0802">TPR repeat</keyword>
    <feature type="domain" description="Thioredoxin" evidence="5">
        <location>
            <begin position="36"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="repeat" description="TPR" evidence="4">
        <location>
            <begin position="161"/>
            <end position="194"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008987"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00339"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ69222.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="333" mass="34905" checksum="11BD8C90FD5D1165" modified="2015-12-09" version="1">MSNGDYSIGGQVGGGFGASMGGGYGGQGGGFGGGGGNGSGGAPDGDLIFDVTTQTFMADVMEASRQQPVLVDFWAPWCGPCKQLTPLIEDAVKAAGGTVKLAKMNIDDHPEIAGQMGIQSIPAVIAFKDGQPVDGFMGAQPESQIKAFIEKVGGPAPANPAEAYLEQATALLADKDYGQAAQLFGALMQAEPDNVQAIAGLAQCYLGADDLERAKQALELVPEEKRADEAYLAAKAAVDLAEQAASLGDLAGFEERIAQNPDDHQARFDLALGLNSKGAKTAAVDQLIEIVRRDREWNEDGARKQLLQFFEAWGFKDEASAYGRRKLSAVLFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A471</accession>
    <name>A0A0M7A471_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01775</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68533.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671502.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ68533">
        <property type="protein sequence ID" value="CTQ68533"/>
        <property type="gene ID" value="LAX5112_01775"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ68533.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="107" mass="11966" checksum="9AEED51C7A78F515" modified="2015-12-09" version="1">MAYIQPSPYLLKEDLIGVTTQKTLNIRVPKEPSEAITAIVAYAGIAKRLHVELSTHAEAIGLDLDQIKTDLISEAKKAVPHNDFSDNEIRNYNIMFEAIDTIFKPID</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A498</accession>
    <name>A0A0M7A498_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Disulfide bond formation protein DsbB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">LAX5112_02219</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69709.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671855.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02219"/>
    <dbReference type="EnsemblBacteria" id="CTQ69709">
        <property type="protein sequence ID" value="CTQ69709"/>
        <property type="gene ID" value="LAX5112_02219"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015035">
        <property type="term" value="F:protein-disulfide reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006457">
        <property type="term" value="P:protein folding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003752">
        <property type="entry name" value="DiS_bond_form_DsbB/BdbC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023380">
        <property type="entry name" value="DsbB-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024199">
        <property type="entry name" value="Uncharacterised_DsbB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02600">
        <property type="entry name" value="DsbB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF033913">
        <property type="entry name" value="S-S_format_DsbB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF158442">
        <property type="entry name" value="SSF158442"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="45"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="69"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="141"/>
            <end position="163"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ69709.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="174" mass="17763" checksum="2CB5083A470A0139" modified="2015-12-09" version="1">MSAEKLAQSLTLLLLAGGLVVIGTAWGYQVLGGYVPCKLCLEQRIPYYIGLPMALVALGALVSGRKGIAAILLLAVAAVFAYGAGLGIYQAGAEWQFWDGPNDCGGGTAAPASAANMLQALQSTRVVSCTEASWRMLGLSFAGWNAVASAGLAGLGVLAAGILKFRRSMAKSPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4B0</accession>
    <name>A0A0M7A4B0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Histidinol-phosphate aminotransferase</fullName>
            <ecNumber evidence="7">2.6.1.9</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Imidazole acetol-phosphate transaminase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9" type="primary">hisC2</name>
        <name evidence="7" type="synonym">hisC</name>
        <name evidence="9" type="ORF">LAX5112_02074</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>2-oxoglutarate + L-histidinol phosphate = 3-(imidazol-4-yl)-2-oxopropyl phosphate + L-glutamate</text>
            <dbReference type="Rhea" id="RHEA:23744"/>
            <dbReference type="ChEBI" id="CHEBI:16810"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:57766"/>
            <dbReference type="ChEBI" id="CHEBI:57980"/>
            <dbReference type="EC" id="2.6.1.9"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 7">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="3 7">Amino-acid biosynthesis; L-histidine biosynthesis; L-histidine from 5-phospho-alpha-D-ribose 1-diphosphate: step 7/9.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5 7">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4 7">Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.6.1.9" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69332.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671748.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02074"/>
    <dbReference type="EnsemblBacteria" id="CTQ69332">
        <property type="protein sequence ID" value="CTQ69332"/>
        <property type="gene ID" value="LAX5112_02074"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00031">
        <property type="reaction ID" value="UER00012"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004400">
        <property type="term" value="F:histidinol-phosphate transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000105">
        <property type="term" value="P:histidine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01023">
        <property type="entry name" value="HisC_aminotrans_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004839">
        <property type="entry name" value="Aminotransferase_I/II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005861">
        <property type="entry name" value="HisP_aminotrans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00155">
        <property type="entry name" value="Aminotran_1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01141">
        <property type="entry name" value="hisC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="6 7 9" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="7" id="KW-0368">Histidine biosynthesis</keyword>
    <keyword evidence="7" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 9" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Aminotran_1_2" evidence="8">
        <location>
            <begin position="44"/>
            <end position="369"/>
        </location>
    </feature>
    <feature type="modified residue" description="N6-(pyridoxal phosphate)lysine" evidence="7">
        <location>
            <position position="233"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001045"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00007970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022576"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ69332.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="377" mass="40608" checksum="9C0E95BD32524733" modified="2015-12-09" version="1">MTIAVTEVDQTAVQSRPQPKQGVLDIAPYVPGKSKGSHGKTLHKLSSNETPLGFSDAVSAAIESVGKSLELYPDGGATELRAAIGDVYGLNPDRIICGAGSDEILSMLANTYLDEGDEAIYSEHGFLVYEIAIRAAGATPVVAPEKDFTTDVDAILERVTSRTKMVFLANPNNPTGTYIPFEEVKRLHQALPPHVLLVLDAAYGEYVRRNDYESGIELAATADNVVMTRTFSKIYGLANLRLGWGFGPAHVIDAMNRIRGPFNVSGVAIAAGAAAVRDRSFVTASVEHNEKWLPWVTAELEKLGLTVTPSVGNFVLVHFPDVDGKRATDADTYLLERGCVLRLVGNYGLPNAIRMTIGSEEANRTVVAHLKDFLAQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4D2</accession>
    <name>A0A0M7A4D2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Patatin-related protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_01756</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68484.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671486.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01756"/>
    <dbReference type="EnsemblBacteria" id="CTQ68484">
        <property type="protein sequence ID" value="CTQ68484"/>
        <property type="gene ID" value="LAX5112_01756"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016042">
        <property type="term" value="P:lipid catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016035">
        <property type="entry name" value="Acyl_Trfase/lysoPLipase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024282">
        <property type="entry name" value="DUF3376"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019894">
        <property type="entry name" value="Patatin-related_protein"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002641">
        <property type="entry name" value="PNPLA_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11856">
        <property type="entry name" value="DUF3376"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01734">
        <property type="entry name" value="Patatin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52151">
        <property type="entry name" value="SSF52151"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03607">
        <property type="entry name" value="TIGR03607"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51635">
        <property type="entry name" value="PNPLA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0442">Lipid degradation</keyword>
    <keyword evidence="1 2" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PNPLA" evidence="3">
        <location>
            <begin position="10"/>
            <end position="336"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="GXSXG" evidence="2">
        <location>
            <begin position="85"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="2">
        <location>
            <position position="87"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="2">
        <location>
            <position position="323"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01161"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51635"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ68484.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="796" mass="90553" checksum="E72B399253954EC4" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4M8</accession>
    <name>A0A0M7A4M8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Lon protease 2</fullName>
            <ecNumber evidence="2">3.4.21.53</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">lon2_1</name>
        <name evidence="2" type="ORF">LAX5112_02028</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.4.21.53" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69220.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008191472.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02028"/>
    <dbReference type="EnsemblBacteria" id="CTQ69220">
        <property type="protein sequence ID" value="CTQ69220"/>
        <property type="gene ID" value="LAX5112_02028"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004252">
        <property type="term" value="F:serine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.130.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003111">
        <property type="entry name" value="Lon_prtase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046336">
        <property type="entry name" value="Lon_prtase_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015947">
        <property type="entry name" value="PUA-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02190">
        <property type="entry name" value="LON_substr_bdg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00464">
        <property type="entry name" value="LON"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88697">
        <property type="entry name" value="SSF88697"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51787">
        <property type="entry name" value="LON_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0645">Protease</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lon N-terminal" evidence="1">
        <location>
            <begin position="18"/>
            <end position="211"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51787"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69220.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="225" mass="24659" checksum="6D1AC084D9CA8603" modified="2015-12-09" version="1">MQAGNAIYETIADLPPVLPVFPLSGALLLPRTQLPLNIFEQRYIDMIDSALAGNRLIGMVQPSGRQNTEDPDQPLLEGVGCAGRLTGFQETGDGRYLITLQGVTRFRVAQELTALTRFRQAEVDFAPFAADLRCGQGEDDVDRNGLLTTLRAYLDANNLEADWDSVKEAETEVLVNALCMMCPYGPQEKQALLEAQDLKTRAETLIAITEMDLARNDNDGGATLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4V6</accession>
    <name>A0A0M7A4V6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Ni_hydr_CYTB domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">yceJ_2</name>
        <name evidence="4" type="ORF">LAX5112_02195</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69647.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671836.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02195"/>
    <dbReference type="EnsemblBacteria" id="CTQ69647">
        <property type="protein sequence ID" value="CTQ69647"/>
        <property type="gene ID" value="LAX5112_02195"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022904">
        <property type="term" value="P:respiratory electron transport chain"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011577">
        <property type="entry name" value="Cyt_b561_bac/Ni-Hgenase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016174">
        <property type="entry name" value="Di-haem_cyt_TM"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01292">
        <property type="entry name" value="Ni_hydr_CYTB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81342">
        <property type="entry name" value="SSF81342"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="16"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="44"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="84"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="143"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="domain" description="Ni_hydr_CYTB" evidence="3">
        <location>
            <begin position="9"/>
            <end position="175"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01292"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ69647.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="175" mass="19884" checksum="FA121A02832FDE64" modified="2015-12-09" version="1">MAAIGTQNRYAAPSRLLHWAIGLLVLLTWPLGLMIGFAKKDVVLDFYLLHESIGFLVLWLMLIRVGNRWLNRPPRHEAPPLERYAAEAVHGLLYLFLILMPVSGFLATNAHGFPLKWFGILEVWSPIGKSPDIAPVFSAVHEWSAWILFGLFTVHIGAVLMHHVIRKDDTLYRII</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5G6</accession>
    <name>A0A0M7A5G6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Molybdenum transport system permease protein ModB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">modB_2</name>
        <name evidence="7" type="ORF">LAX5112_02204</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69666.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671843.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02204"/>
    <dbReference type="EnsemblBacteria" id="CTQ69666">
        <property type="protein sequence ID" value="CTQ69666"/>
        <property type="gene ID" value="LAX5112_02204"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="56"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="91"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="125"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="192"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="234"/>
            <end position="255"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="56"/>
            <end position="255"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ69666.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="267" mass="28222" checksum="9482C126F870F846" modified="2015-12-09" version="1">MSNRTFVAACLVPLAVFALAFLALPLVRLLQASFESEAGWRIYLQILQTPRYLETLVNTVLVSLAVSLAALALSTTAGLFLARNRFFGRGLLISVLTLPLAFPGVVIGFLIILLGGRQGLFNQLLPGHIVFAYSLTGLFLGYLYFSIPRVLLTVMAAVEKLDPALEEAARTLGASPWRIVVDVILPGLAPSLVAAGAIAFATAMGAFGTAFTLATNIDVLPMVIYTEFTLSANIAMASALSVLLGLVTWVLLYIARSFAGTTVAAGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6H6</accession>
    <name>A0A0M7A6H6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02527</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70489.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672101.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70489">
        <property type="protein sequence ID" value="CTQ70489"/>
        <property type="gene ID" value="LAX5112_02527"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.450">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034660">
        <property type="entry name" value="DinB/YfiT-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012550">
        <property type="entry name" value="DUF1706"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR40658">
        <property type="entry name" value="PTHR40658"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08020">
        <property type="entry name" value="DUF1706"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ70489.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="166" mass="18793" checksum="E26A3680B0CF7E82" modified="2015-12-09" version="1">MAAGSNSELLEITEKEWSKLKDVLDALPAMQRLEKDEDGISPKDIVGHRAHWIELFLKWYRDGQSGVPVHIPAEGYKWSETPRYNADLRARQAGFSWASVRTLLEANHFELLALVENLTEKELYGAPMKGSHSKWPAGRFAEAAGASHYRSAVKYLRKRMRVTKAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6P3</accession>
    <name>A0A0M7A6P3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02350</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70086.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040452894.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02350"/>
    <dbReference type="EnsemblBacteria" id="CTQ70086">
        <property type="protein sequence ID" value="CTQ70086"/>
        <property type="gene ID" value="LAX5112_02350"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018661">
        <property type="entry name" value="DUF2093"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09866">
        <property type="entry name" value="DUF2093"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ70086.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="73" mass="8483" checksum="CC07CC7A6039715A" modified="2015-12-09" version="1">MNRYENPRIPSEARIRYLDGDYQVETPGTFVRCAVTGTAIPLDELKYWSVELQEPYVDAHASMKRYLETQGKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6S2</accession>
    <name>A0A0M7A6S2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Nicotinamidase/pyrazinamidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02387</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70162.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672004.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02387"/>
    <dbReference type="EnsemblBacteria" id="CTQ70162">
        <property type="protein sequence ID" value="CTQ70162"/>
        <property type="gene ID" value="LAX5112_02387"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.850">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000868">
        <property type="entry name" value="Isochorismatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036380">
        <property type="entry name" value="Isochorismatase-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00857">
        <property type="entry name" value="Isochorismatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52499">
        <property type="entry name" value="SSF52499"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="domain" description="Isochorismatase" evidence="2">
        <location>
            <begin position="46"/>
            <end position="200"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ70162.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="216" mass="23451" checksum="BF5E167CD488E7D5" modified="2015-12-09" version="1">MSFLTLAVSGLGALVLWTAGYFFWVVWISSKATTGNPIDRATRPNTALLVIDIQEDFTRNSPKPYSEDVRARGIARINQEIEAAHAAGQEVILIKQVFRHWPAILAMKLLMGGIGTPGRKGLAFDEDLKTGNVPVFEKPIGDAFFNPELDAYLAGQNVGHLRLTGLDACQCVQFTAKGALNRGYSVEIIEPATMTVTPEKWPPIKDELLAAGAALS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6Z8</accession>
    <name>A0A0M7A6Z8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative metal chaperone YciC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yciC_2</name>
        <name evidence="3" type="ORF">LAX5112_02655</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the SIMIBI class G3E GTPase family. CobW subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70925.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672226.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02655"/>
    <dbReference type="EnsemblBacteria" id="CTQ70925">
        <property type="protein sequence ID" value="CTQ70925"/>
        <property type="gene ID" value="LAX5112_02655"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1220.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011629">
        <property type="entry name" value="Cbl_biosynth_CobW-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036627">
        <property type="entry name" value="CobW-likC_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003495">
        <property type="entry name" value="CobW/HypB/UreG_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02492">
        <property type="entry name" value="cobW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07683">
        <property type="entry name" value="CobW_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00833">
        <property type="entry name" value="CobW_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CobW C-terminal" evidence="2">
        <location>
            <begin position="260"/>
            <end position="375"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ70925.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="404" mass="44839" checksum="2453DBB76DDD74E3" modified="2015-12-09" version="1">MSAIRLPVTILSGFLGAGKTTLLNRILNNRDNLKVAVIVNDMSEVNIDADLVRSGGAELSHTDETLVEMSNGCICCTLRDDLLQEVRRIAEERRFDYLLIESTGISEPLPVAATFDFRDEEGESLSDVARIDTMVTVVDAVNLLKDFSSHEFLSDRGETLGEEDERTLVHLLTDQIEFADVVVLNKVSAANAGQVDAARKIIRSLNADARIIETDYSAVEPSEILNTGLFDFEKAHEHPMWAKELYGFADHVPETEEYGVASYVYRARRPFDPAKIHALLSGSLPGVIRAKGHFWIASRPDYVLEFSLAGALSSISPLGTWWASVPPVQWPQDERVQAYARSHWSEPFGDRRQEIVIIGAGIDWPALRERMDACLIPPEAGDDLSAFASLADPFPPFQRREAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7D2</accession>
    <name>A0A0M7A7D2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Gly-zipper_Omp domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02681</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70998.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008189470.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70998">
        <property type="protein sequence ID" value="CTQ70998"/>
        <property type="gene ID" value="LAX5112_02681"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039567">
        <property type="entry name" value="Gly-zipper"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012640">
        <property type="entry name" value="Membr_lipoprot_lipid_attach_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13488">
        <property type="entry name" value="Gly-zipper_Omp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08139">
        <property type="entry name" value="LPAM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="domain" description="Gly-zipper_Omp" evidence="2">
        <location>
            <begin position="28"/>
            <end position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13488"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ70998.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="89" mass="8319" checksum="F8BB98F61D33FC32" modified="2015-12-09" version="1">MKKLVLLAGITLALAGCQSDSSRDRALVGGGLGAATGAAIGAAATGDVGGALVGAAIGGAGGAIVGGATTPKNCVAYDRYGNPYRVACP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7M3</accession>
    <name>A0A0M7A7M3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Fosfomycin resistance protein FosX</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">fosX</name>
        <name evidence="2" type="ORF">LAX5112_02187</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69624.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671829.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02187"/>
    <dbReference type="EnsemblBacteria" id="CTQ69624">
        <property type="protein sequence ID" value="CTQ69624"/>
        <property type="gene ID" value="LAX5112_02187"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd08364">
        <property type="entry name" value="FosX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.180.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037434">
        <property type="entry name" value="FosX"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029068">
        <property type="entry name" value="Glyas_Bleomycin-R_OHBP_Dase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004360">
        <property type="entry name" value="Glyas_Fos-R_dOase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037523">
        <property type="entry name" value="VOC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00903">
        <property type="entry name" value="Glyoxalase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54593">
        <property type="entry name" value="SSF54593"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51819">
        <property type="entry name" value="VOC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="VOC" evidence="1">
        <location>
            <begin position="4"/>
            <end position="122"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51819"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69624.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="142" mass="16429" checksum="C3BD9461B6AF64F9" modified="2015-12-09" version="1">MSSGLSHMTFIVSDLDKMTRILTEVLKAEEVYGSGQETFSLSEERFFLVGDVWIAIMKGAPLSERTYNHVAFKIEERDFEARLAAIQSLGLEFKPPRDRVEGEGRSIYFYDTDNHLFELHTGTLEMRLESYRKILDERRAAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7R5</accession>
    <name>A0A0M7A7R5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Putative L,D-transpeptidase ErfK/SrfK</fullName>
            <ecNumber evidence="6">2.-.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">erfK_3</name>
        <name evidence="6" type="ORF">LAX5112_02515</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Cell wall biogenesis; peptidoglycan biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the YkuD family.</text>
    </comment>
    <dbReference type="EC" id="2.-.-.-" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70456.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02515"/>
    <dbReference type="EnsemblBacteria" id="CTQ70456">
        <property type="protein sequence ID" value="CTQ70456"/>
        <property type="gene ID" value="LAX5112_02515"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00219"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071972">
        <property type="term" value="F:peptidoglycan L,D-transpeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd16913">
        <property type="entry name" value="YkuD_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.440.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005490">
        <property type="entry name" value="LD_TPept_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006311">
        <property type="entry name" value="TAT_signal"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038063">
        <property type="entry name" value="Transpep_catalytic_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03734">
        <property type="entry name" value="YkuD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141523">
        <property type="entry name" value="SSF141523"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <keyword evidence="3 6" id="KW-0808">Transferase</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809501" evidence="4">
        <location>
            <begin position="23"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="domain" description="YkuD" evidence="5">
        <location>
            <begin position="81"/>
            <end position="217"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004752"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF03734"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ70456.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="218" mass="24431" checksum="187C71B43BDDA286" modified="2015-12-09" version="1">MSLLTRRSFLAGSASLTGLAVSGCVSSTTPPAAPPVSPYVSMYRAMPEERFPIPAINLNKVPERYYRKQVRYNTTERVGTLIVDTSNYYLYLVQENGMAMRYGVGLGRAGFEWSGRARIARKAEWPRWVPPEEMIQREPELEQWSWKNGGMDPGLENPLGARALYIYQGNVDTLYRIHGTAEYWTIGSAVSSGCVRVMNQDIIDLYGRVPVGSQIVVI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8S8</accession>
    <name>A0A0M7A8S8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">2-dehydro-3-deoxygluconokinase</fullName>
            <ecNumber evidence="4">2.7.1.45</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">kdgK_3</name>
        <name evidence="4" type="ORF">LAX5112_02688</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.7.1.45" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71017.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672248.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02688"/>
    <dbReference type="EnsemblBacteria" id="CTQ71017">
        <property type="protein sequence ID" value="CTQ71017"/>
        <property type="gene ID" value="LAX5112_02688"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008673">
        <property type="term" value="F:2-dehydro-3-deoxygluconokinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1190.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002173">
        <property type="entry name" value="Carboh/pur_kinase_PfkB_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011611">
        <property type="entry name" value="PfkB_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029056">
        <property type="entry name" value="Ribokinase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00294">
        <property type="entry name" value="PfkB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53613">
        <property type="entry name" value="SSF53613"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00584">
        <property type="entry name" value="PFKB_KINASES_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 4" id="KW-0418">Kinase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PfkB" evidence="3">
        <location>
            <begin position="20"/>
            <end position="303"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ71017.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="315" mass="33259" checksum="FD80A5372CE14364" modified="2015-12-09" version="1">MYLICGEALFDLFGADTSGTSVGFDGRIGGSPFNVAMGLARLGEDAAFFGGISKDVLGEKLVGKLRDEGVSDRFVIRSDNLTTLSLVQQDPDGQPAYTFYGANAADRMITERDLPVFEGPPSFIHIGSYTALTEPVASALKSLIAREHARCLISFDPNIRPTVVADMDKWRTNTTAIVPYTDVIKVSDEDLALIAPGEPVEAIARDWLAEGAKLVIVTRGKDGASAYTAHSEASVPGVAVDVVDTVGAGDTFQAALLSGLKTLGADNREGLTALDPAQLTRLLTFCTQAAAITCSRRGADLPTKADLEKEGCSLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8W9</accession>
    <name>A0A0M7A8W9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Xaa-Pro dipeptidase</fullName>
            <ecNumber evidence="5">3.4.13.9</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">pepQ_3</name>
        <name evidence="5" type="ORF">LAX5112_02628</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase M24B family.</text>
    </comment>
    <dbReference type="EC" id="3.4.13.9" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70846.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672205.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02628"/>
    <dbReference type="EnsemblBacteria" id="CTQ70846">
        <property type="protein sequence ID" value="CTQ70846"/>
        <property type="gene ID" value="LAX5112_02628"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0110165">
        <property type="term" value="C:cellular anatomical entity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070006">
        <property type="term" value="F:metalloaminopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102009">
        <property type="term" value="F:proline dipeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd01085">
        <property type="entry name" value="APP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.350.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029149">
        <property type="entry name" value="Creatin/AminoP/Spt16_NTD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036005">
        <property type="entry name" value="Creatinase/aminopeptidase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000587">
        <property type="entry name" value="Creatinase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000994">
        <property type="entry name" value="Pept_M24"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033740">
        <property type="entry name" value="Pept_M24B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032416">
        <property type="entry name" value="Peptidase_M24_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01321">
        <property type="entry name" value="Creatinase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00557">
        <property type="entry name" value="Peptidase_M24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16188">
        <property type="entry name" value="Peptidase_M24_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53092">
        <property type="entry name" value="SSF53092"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55920">
        <property type="entry name" value="SSF55920"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0224">Dipeptidase</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-0645">Protease</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Creatinase_N" evidence="3">
        <location>
            <begin position="21"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_M24" evidence="2">
        <location>
            <begin position="322"/>
            <end position="533"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_M24_C" evidence="4">
        <location>
            <begin position="544"/>
            <end position="604"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008766"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00557"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01321"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF16188"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ70846.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="604" mass="65666" checksum="4C5EE09624415BAC" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8Z9</accession>
    <name>A0A0M7A8Z9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C</fullName>
            <shortName evidence="1">Asp/Glu-ADT subunit C</shortName>
            <ecNumber evidence="1">6.3.5.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1 2" type="primary">gatC</name>
        <name evidence="2" type="ORF">LAX5112_02638</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + H2O + L-aspartyl-tRNA(Asn) + L-glutamine = ADP + 2 H(+) + L-asparaginyl-tRNA(Asn) + L-glutamate + phosphate</text>
            <dbReference type="Rhea" id="RHEA:14513"/>
            <dbReference type="Rhea" id="RHEA-COMP:9674"/>
            <dbReference type="Rhea" id="RHEA-COMP:9677"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="ChEBI" id="CHEBI:78515"/>
            <dbReference type="ChEBI" id="CHEBI:78516"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + H2O + L-glutamine + L-glutamyl-tRNA(Gln) = ADP + H(+) + L-glutamate + L-glutaminyl-tRNA(Gln) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:17521"/>
            <dbReference type="Rhea" id="RHEA-COMP:9681"/>
            <dbReference type="Rhea" id="RHEA-COMP:9684"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="ChEBI" id="CHEBI:78520"/>
            <dbReference type="ChEBI" id="CHEBI:78521"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="1">Heterotrimer of A, B and C subunits.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the GatC family.</text>
    </comment>
    <dbReference type="EC" id="6.3.5.-" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70876.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008193021.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02638"/>
    <dbReference type="EnsemblBacteria" id="CTQ70876">
        <property type="protein sequence ID" value="CTQ70876"/>
        <property type="gene ID" value="LAX5112_02638"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050566">
        <property type="term" value="F:asparaginyl-tRNA synthase (glutamine-hydrolyzing) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050567">
        <property type="term" value="F:glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006450">
        <property type="term" value="P:regulation of translational fidelity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00122">
        <property type="entry name" value="GatC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003837">
        <property type="entry name" value="Asp/Glu-ADT_csu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036113">
        <property type="entry name" value="Asp/Glu-ADT_sf_sub_c"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15004">
        <property type="entry name" value="PTHR15004"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02686">
        <property type="entry name" value="Glu-tRNAGln"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141000">
        <property type="entry name" value="SSF141000"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00135">
        <property type="entry name" value="gatC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 2" id="KW-0436">Ligase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="1" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00122"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70876.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="95" mass="10288" checksum="CE3778503E4F5C27" modified="2015-12-09" version="1">MSVDTATVKRVARLARIKVSEDEATRMTGELNAILGFVEQLDEVNIDGVEPMTSVVETTMKKRADGVTDGNKAADITKNAPASEDSFFMVPKVVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A969</accession>
    <name>A0A0M7A969_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Glutathione S-transferase</fullName>
            <ecNumber evidence="3">2.5.1.18</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">gst</name>
        <name evidence="3" type="ORF">LAX5112_02393</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.5.1.18" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70174.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672010.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02393"/>
    <dbReference type="EnsemblBacteria" id="CTQ70174">
        <property type="protein sequence ID" value="CTQ70174"/>
        <property type="gene ID" value="LAX5112_02393"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004364">
        <property type="term" value="F:glutathione transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006749">
        <property type="term" value="P:glutathione metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010987">
        <property type="entry name" value="Glutathione-S-Trfase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036282">
        <property type="entry name" value="Glutathione-S-Trfase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040079">
        <property type="entry name" value="Glutathione_S-Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004045">
        <property type="entry name" value="Glutathione_S-Trfase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004046">
        <property type="entry name" value="GST_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00043">
        <property type="entry name" value="GST_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13409">
        <property type="entry name" value="GST_N_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00019">
        <property type="entry name" value="Glutathione_Transferase_(cytos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47616">
        <property type="entry name" value="SSF47616"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50405">
        <property type="entry name" value="GST_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50404">
        <property type="entry name" value="GST_NTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="GST N-terminal" evidence="1">
        <location>
            <begin position="1"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="domain" description="GST C-terminal" evidence="2">
        <location>
            <begin position="87"/>
            <end position="204"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50404"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50405"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ70174.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="204" mass="22544" checksum="9E2CAFF3DC6EF5D5" modified="2015-12-09" version="1">MKLFYKSGACSMAAHILLNEADVPFTLEKVDTDAGTTESGATYAQINPRGYVPALKFEDGAVLTENVAILTWLSEQFPQLGPQGETYALQKYRMLEALSFLTSELHKAFSPYFSGKTFTAEESARNLAVLKKKISQFEAMLSDDGGYLLGETFSVADAYAFVILNWANFIGVALTEWPRTTDYVNRIKARPATQRTLQEEGLAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAT3</accession>
    <name>A0A0M7AAT3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Peripla_BP_6 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03105</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72228.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008190380.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03105"/>
    <dbReference type="EnsemblBacteria" id="CTQ72228">
        <property type="protein sequence ID" value="CTQ72228"/>
        <property type="gene ID" value="LAX5112_03105"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028081">
        <property type="entry name" value="Leu-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13458">
        <property type="entry name" value="Peripla_BP_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809367" description="Peripla_BP_6 domain-containing protein" evidence="1">
        <location>
            <begin position="29"/>
            <end position="442"/>
        </location>
    </feature>
    <feature type="domain" description="Peripla_BP_6" evidence="2">
        <location>
            <begin position="34"/>
            <end position="398"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13458"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ72228.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="442" mass="48092" checksum="12454302D3B08873" modified="2015-12-09" version="1">MNFKQLALGTAVAVGVGLSGAMTPVAQAEDANYVPLLTYRTGPFAASGIHIANGMHDYLKMLNERDGGIGGVKLALEECETGYNAQKGVECYEATKGKGALVYNPYSTGITLQLIPKASVDKIPVLSMGYGLSAAADGNTFPWVFNVPDTYWDGASVVIKYIGEQEGGLDNLNGKKIGYIFLDAGYGREPIPLLEQLAEKHGFELMKYPVGLKEMQNQSSQWLNVRRDRPDYMIMWGWGAMNPTAIKEAVKIRYPMDKFIGVWWSAGDDDAAAGGQDAKGYKAMNFSGVGRDFPALDDIQKYVIDAGLSSTDGETLGQTLYNRGVLNSVIVAEGIRTAQELTGKKVITGEDMRMGLEALNLDEARLAELGLKGFAHPMKVTCEDHSGSHPVFIQEWSGTQWQQASGWIEPMTDVVRPLIEAAAKEYAEKNAPWPARTEPCPN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AB62</accession>
    <name>A0A0M7AB62_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 10">Phosphoenolpyruvate carboxykinase (ATP)</fullName>
            <shortName evidence="10">PCK</shortName>
            <shortName evidence="10">PEP carboxykinase</shortName>
            <shortName evidence="10">PEPCK</shortName>
            <ecNumber evidence="4 10">4.1.1.49</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10 11" type="primary">pckA</name>
        <name evidence="11" type="ORF">LAX5112_02906</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 10">
            <text>ATP + oxaloacetate = ADP + CO2 + phosphoenolpyruvate</text>
            <dbReference type="Rhea" id="RHEA:18617"/>
            <dbReference type="ChEBI" id="CHEBI:16452"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:58702"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="4.1.1.49"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="10">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
        <text evidence="10">Binds 1 Mn(2+) ion per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2 10">Carbohydrate biosynthesis; gluconeogenesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="10">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 10">Belongs to the phosphoenolpyruvate carboxykinase (ATP) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="4.1.1.49" evidence="4 10"/>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71682.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672413.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02906"/>
    <dbReference type="EnsemblBacteria" id="CTQ71682">
        <property type="protein sequence ID" value="CTQ71682"/>
        <property type="gene ID" value="LAX5112_02906"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00138"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004612">
        <property type="term" value="F:phosphoenolpyruvate carboxykinase (ATP) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006094">
        <property type="term" value="P:gluconeogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00484">
        <property type="entry name" value="PEPCK_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.449.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.228.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00453">
        <property type="entry name" value="PEPCK_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001272">
        <property type="entry name" value="PEP_carboxykinase_ATP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013035">
        <property type="entry name" value="PEP_carboxykinase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008210">
        <property type="entry name" value="PEP_carboxykinase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015994">
        <property type="entry name" value="PEPCK_ATP_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30031">
        <property type="entry name" value="PTHR30031"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01293">
        <property type="entry name" value="PEPCK_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006294">
        <property type="entry name" value="PEP_crbxkin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF68923">
        <property type="entry name" value="SSF68923"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00224">
        <property type="entry name" value="pckA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00532">
        <property type="entry name" value="PEPCK_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="10" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7 10" id="KW-0210">Decarboxylase</keyword>
    <keyword evidence="5 10" id="KW-0312">Gluconeogenesis</keyword>
    <keyword evidence="11" id="KW-0418">Kinase</keyword>
    <keyword evidence="9 10 11" id="KW-0456">Lyase</keyword>
    <keyword evidence="10" id="KW-0464">Manganese</keyword>
    <keyword evidence="10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6 10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="11" id="KW-0808">Transferase</keyword>
    <feature type="binding site" evidence="10">
        <location>
            <position position="61"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="195"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="201"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="220"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <begin position="236"/>
            <end position="244"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="257"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="285"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="322"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="447"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001389"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004742"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022793"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00453"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ71682.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="536" mass="58500" checksum="45C0C45DD28C39DF" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AD34</accession>
    <name>A0A0M7AD34_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Acyl-CoA dehydrogenase</fullName>
            <ecNumber evidence="9">1.3.99.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">mmgC_4</name>
        <name evidence="9" type="ORF">LAX5112_03068</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 5">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the acyl-CoA dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.3.99.-" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72130.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03068"/>
    <dbReference type="EnsemblBacteria" id="CTQ72130">
        <property type="protein sequence ID" value="CTQ72130"/>
        <property type="gene ID" value="LAX5112_03068"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003995">
        <property type="term" value="F:acyl-CoA dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.540.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006089">
        <property type="entry name" value="Acyl-CoA_DH_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006091">
        <property type="entry name" value="Acyl-CoA_Oxase/DH_mid-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046373">
        <property type="entry name" value="Acyl-CoA_Oxase/DH_mid-dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036250">
        <property type="entry name" value="AcylCo_DH-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009075">
        <property type="entry name" value="AcylCo_DH/oxidase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013786">
        <property type="entry name" value="AcylCoA_DH/ox_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037069">
        <property type="entry name" value="AcylCoA_DH/ox_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009100">
        <property type="entry name" value="AcylCoA_DH/oxidase_NM_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00441">
        <property type="entry name" value="Acyl-CoA_dh_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02770">
        <property type="entry name" value="Acyl-CoA_dh_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02771">
        <property type="entry name" value="Acyl-CoA_dh_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47203">
        <property type="entry name" value="SSF47203"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56645">
        <property type="entry name" value="SSF56645"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00073">
        <property type="entry name" value="ACYL_COA_DH_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0274">FAD</keyword>
    <keyword evidence="3 5" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="5 9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Acyl-CoA_dh_N" evidence="8">
        <location>
            <begin position="13"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="domain" description="Acyl-CoA_dh_M" evidence="7">
        <location>
            <begin position="126"/>
            <end position="222"/>
        </location>
    </feature>
    <feature type="domain" description="Acyl-CoA_dh_1" evidence="6">
        <location>
            <begin position="235"/>
            <end position="383"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009347"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU362125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00441"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF02770"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF02771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ72130.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="385" mass="42491" checksum="DEF27057C072D28F" modified="2015-12-09" version="1">MSVFAATASWPQEEHRMFYDSASRLLDDEMVPNIEKWNDQGVVDRAFWTKTGEAGILGAALPEEFGGAGAPISFDAVTAYLQGRKGESSWGFSIQSIVNHYVAAYGTDSQKERWLPKLASGEYVGAIAMTEPGTGSDLKSVKTTAELVGNEYVLNGSKIFITNGQTADLIIVVAKTDKTMGTKGVSLLVLETEGADGFTRGRNLKKLGCKANDTSELFFEDVRVPPENLLGGEEGQGFYQLMKQLPWERLIIACLALGVIDFAIDETVRYVQDRKAFGQRVMDFQNTRFKLAECKTKAEVLRSFVNDCIARMDEGTLDAATASMAKYWGTQVQNEIANECLQLHGGYGYMMEYPIARIYADSRVQMIYGGSNEIMKELIARSIDI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADR0</accession>
    <name>A0A0M7ADR0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03467</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73228.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ73228">
        <property type="protein sequence ID" value="CTQ73228"/>
        <property type="gene ID" value="LAX5112_03467"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ73228.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="32" mass="3404" checksum="6631D4AB099A6CC5" modified="2015-12-09" version="1">MFYFARDCAAFASLVSFCATLAVWGDVILSAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADY5</accession>
    <name>A0A0M7ADY5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03321</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72827.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008195420.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72827">
        <property type="protein sequence ID" value="CTQ72827"/>
        <property type="gene ID" value="LAX5112_03321"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ72827.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="187" mass="21023" checksum="5704E921002859B8" modified="2015-12-09" version="1">MIQIASIFAKPVLDKFGVTDEAKERFVALQKAVTGDTGTAWIPLSRPSATLDFSTHTQTQSDMFNTGSIEGKDGPITWCEFVWNSDQVIKDCILHKVSWRFYSNKLICLEICASKDEKGFDTSDLIGHRLELRDNTGFLIGIWAAAFLIVKDTDRRSFQTSAEDDHKVLGLHFNMLADKQTGLSFRI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEK9</accession>
    <name>A0A0M7AEK9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">56kDa selenium binding protein (SBP56)</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03421</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the selenium-binding protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ73061.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672818.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03421"/>
    <dbReference type="EnsemblBacteria" id="CTQ73061">
        <property type="protein sequence ID" value="CTQ73061"/>
        <property type="gene ID" value="LAX5112_03421"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008430">
        <property type="term" value="F:selenium binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008826">
        <property type="entry name" value="Se-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23300">
        <property type="entry name" value="PTHR23300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05694">
        <property type="entry name" value="SBP56"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005606"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73061.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="466" mass="52148" checksum="C4AF2BDA8EDB66E3" modified="2015-12-09" version="1">MTVRPDPTFYASPKIAMEAPAETLAFTLMLSPDFSQPDGLAVVDVDPKSKTYGQILHSVMMPNTGDEFHHFGWNACSSALSPLTGHAFLERRYLIIPGIRSSRIYVIDVKEPLKAKIHKIIEPEEVFEKTGYSRPHTIHCGPEGIYVSTLGGGGEDGTDGPPGIFIMDCQTFDIIGRYEIERGIQDKHYDFWWNLPRDYMVSSEWGLPPQFENGIVAEDLLSNKYGHKIHFWDLRGRKNIQTIDLGENHQMALEIRPAHDPVKQYGFVGVVVDTTNLEGAIFTWWRNEDGTFEAKKTVTIAPQPADAEDLPPLLAGFGAVPALVTDIDLSLDDKYLYVSCWGQGEMHQYDVSDPMNPKLAGKVEIGGIVKKTKHPNGKDFGYGPQMVEISRDGKRVFWTNSLYSTWDDQFYPGERGAAMVVAHVQEGGGLELDPDFYVEFPKGYRSHQIRLEGGDCSTDSFCYPSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEZ5</accession>
    <name>A0A0M7AEZ5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03292</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72770.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672718.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03292"/>
    <dbReference type="EnsemblBacteria" id="CTQ72770">
        <property type="protein sequence ID" value="CTQ72770"/>
        <property type="gene ID" value="LAX5112_03292"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="328"/>
            <end position="349"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1882"/>
            <end position="1904"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72770.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="3368" mass="366179" checksum="E0162CE4E682B27E" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFG6</accession>
    <name>A0A0M7AFG6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Heat shock protein 70</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">dnaK_2</name>
        <name evidence="4" type="ORF">LAX5112_03668</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the heat shock protein 70 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73818.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673018.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03668"/>
    <dbReference type="EnsemblBacteria" id="CTQ73818">
        <property type="protein sequence ID" value="CTQ73818"/>
        <property type="gene ID" value="LAX5112_03668"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140662">
        <property type="term" value="F:ATP-dependent protein folding chaperone"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd10231">
        <property type="entry name" value="YegD_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018181">
        <property type="entry name" value="Heat_shock_70_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013126">
        <property type="entry name" value="Hsp_70_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042054">
        <property type="entry name" value="YegD-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19375">
        <property type="entry name" value="PTHR19375"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00012">
        <property type="entry name" value="HSP70"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="SSF53067"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01036">
        <property type="entry name" value="HSP70_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0346">Stress response</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007381"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ73818.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="429" mass="47034" checksum="0383481C0F903B7E" modified="2015-12-09" version="1">MHTIGLDFGTSNTVAMTASMSGSAEAVTFLGDREEVTSLLSVLSFLDKGAAKAPHPEVGPWAIRQFLESFGDVRFIQSLKTFAASAAFKGTGIFGVPFDFENLMATFLTAAFERAHPQINPSQTRLVVGRPVEFAGHNPNEQLAMKRYRSAFSKLGYDDILFVMEPVGAAFSYAQSLKQDTTILVADLGGGTTDYSLMRFETSAGHMHAHPLGRGGIGIAGDTFDYRIIDNVVLPKLGKGSQYESMGKTLDIPPNLFSNFARWHMLSIFKTSDDFKEMKKLLRWCLDPDQIELFIELVEEDQGYPLYKSVSETKAILSANEEAELIFKPLGPDFKASVARKDFESWIAPDLLKMNRALDSALERAKLSEDDIDRVFMTGGTSFVPAVRKMFADRFGAERISGGNELTSVANGLALIGARQDAADWSVAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFX6</accession>
    <name>A0A0M7AFX6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Precorrin-2 C(20)-methyltransferase</fullName>
            <ecNumber evidence="10">2.1.1.130</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">cobI</name>
        <name evidence="10" type="ORF">LAX5112_03658</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Cofactor biosynthesis; adenosylcobalamin biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 7 8">Belongs to the precorrin methyltransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.130" evidence="10"/>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73789.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03658"/>
    <dbReference type="EnsemblBacteria" id="CTQ73789">
        <property type="protein sequence ID" value="CTQ73789"/>
        <property type="gene ID" value="LAX5112_03658"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00148"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030788">
        <property type="term" value="F:precorrin-2 C20-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009236">
        <property type="term" value="P:cobalamin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd11645">
        <property type="entry name" value="Precorrin_2_C20_MT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.950.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1010.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000878">
        <property type="entry name" value="4pyrrol_Mease"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035996">
        <property type="entry name" value="4pyrrol_Methylase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014777">
        <property type="entry name" value="4pyrrole_Mease_sub1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014776">
        <property type="entry name" value="4pyrrole_Mease_sub2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012382">
        <property type="entry name" value="CobI/CbiL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006364">
        <property type="entry name" value="CobI/CbiL/CobIJ_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003043">
        <property type="entry name" value="Uropor_MeTrfase_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00590">
        <property type="entry name" value="TP_methylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF036427">
        <property type="entry name" value="Precrrn-2_mtase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53790">
        <property type="entry name" value="SSF53790"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01467">
        <property type="entry name" value="cobI_cbiL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00839">
        <property type="entry name" value="SUMT_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00840">
        <property type="entry name" value="SUMT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0169">Cobalamin biosynthesis</keyword>
    <keyword evidence="4 8 10" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="5 8 10" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="TP_methylase" evidence="9">
        <location>
            <begin position="19"/>
            <end position="224"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004953"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005879"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022573"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRNR" id="PIRNR036427"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU003960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF00590"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ73789.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="256" mass="28013" checksum="F3F114B336A63F61" modified="2015-12-09" version="1">MEAGNAGHPVEFCEVMSGTLYGIGLGPGDPELMTLKAHRLISSAKVIAYPAPDTGASFARSIAADTIPQNAREIPIVVPMRVDRFPAQEIYDKAAEEITKVLETGENVVVLCEGDPFFFGSFMYLFDRLSGRFPCEVVPGVTSLTACAAQLMRPLTSRNDVLTVIPGPLPDVDIRAKIEEAQAVAIMKVGRHLPRLKALLDDMNLLDRAGYVERASLPEQKVYRLQDLDTDKAPYFSMILIYKGDEAWTLPPSLSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AG13</accession>
    <name>A0A0M7AG13_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Electron transfer flavoprotein small subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">etfB</name>
        <name evidence="4" type="ORF">LAX5112_03729</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ETF beta-subunit/FixA family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74018.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673061.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03729"/>
    <dbReference type="EnsemblBacteria" id="CTQ74018">
        <property type="protein sequence ID" value="CTQ74018"/>
        <property type="gene ID" value="LAX5112_03729"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01714">
        <property type="entry name" value="ETF_beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000049">
        <property type="entry name" value="ET-Flavoprotein_bsu_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014730">
        <property type="entry name" value="ETF_a/b_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012255">
        <property type="entry name" value="ETF_b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033948">
        <property type="entry name" value="ETF_beta_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21294">
        <property type="entry name" value="PTHR21294"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01012">
        <property type="entry name" value="ETF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000090">
        <property type="entry name" value="Beta-ETF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00893">
        <property type="entry name" value="ETF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01065">
        <property type="entry name" value="ETF_BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0249">Electron transport</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ETF" evidence="3">
        <location>
            <begin position="23"/>
            <end position="211"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007557"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ74018.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="249" mass="26575" checksum="2D3C3816077F6E3C" modified="2015-12-09" version="1">MKILVPVKRVIDYNVKVRVKADGSGVDLANVKMSMNPFDEISVEEALRLKEAGKATEVVVVSVGPQQATETLRTGLAMGADRGILVKTDETTEPLAVAKILKGIVEAEEPGLVIVGKQAIDDDCNQTGQMLSALLGWSQGTFASKVDLGDSTVDVTREVDGGLQTVKLKLPAIVTTDLRLNEPRYASLPNIMKAKKKPIDEKTPDDYGVDITPRLTVVTTAEPAAREAGVKVGSVSELVEKLKNEAGVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGA7</accession>
    <name>A0A0M7AGA7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Heparinase II/III-like protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03697</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ73929.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673038.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03697"/>
    <dbReference type="EnsemblBacteria" id="CTQ73929">
        <property type="protein sequence ID" value="CTQ73929"/>
        <property type="gene ID" value="LAX5112_03697"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.50.10.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008929">
        <property type="entry name" value="Chondroitin_lyas"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012480">
        <property type="entry name" value="Hepar_II_III"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07940">
        <property type="entry name" value="Hepar_II_III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="566"/>
            <end position="604"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73929.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="604" mass="66258" checksum="223475796876571B" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGZ9</accession>
    <name>A0A0M7AGZ9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 13">Replicative DNA helicase</fullName>
            <ecNumber evidence="4 13">3.6.4.12</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="primary">dnaC</name>
        <name evidence="15" type="ORF">LAX5112_03862</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2 13">Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 13">
            <text>ATP + H2O = ADP + H(+) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="3.6.4.12"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="3 13">Belongs to the helicase family. DnaB subfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.12" evidence="4 13"/>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74435.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03862"/>
    <dbReference type="EnsemblBacteria" id="CTQ74435">
        <property type="protein sequence ID" value="CTQ74435"/>
        <property type="gene ID" value="LAX5112_03862"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990077">
        <property type="term" value="C:primosome complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003678">
        <property type="term" value="F:DNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006269">
        <property type="term" value="P:DNA replication, synthesis of RNA primer"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00984">
        <property type="entry name" value="DnaB_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.860.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036185">
        <property type="entry name" value="DNA_heli_DnaB-like_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007692">
        <property type="entry name" value="DNA_helicase_DnaB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007694">
        <property type="entry name" value="DNA_helicase_DnaB-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007693">
        <property type="entry name" value="DNA_helicase_DnaB-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016136">
        <property type="entry name" value="DNA_helicase_N/primase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00772">
        <property type="entry name" value="DnaB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03796">
        <property type="entry name" value="DnaB_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48024">
        <property type="entry name" value="SSF48024"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00665">
        <property type="entry name" value="DnaB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51199">
        <property type="entry name" value="SF4_HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11 13" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7 13" id="KW-0235">DNA replication</keyword>
    <keyword evidence="12 13" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="10 13 15" id="KW-0347">Helicase</keyword>
    <keyword evidence="9 13 15" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="8 13" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6 13" id="KW-0639">Primosome</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SF4 helicase" evidence="14">
        <location>
            <begin position="199"/>
            <end position="496"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001665"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00003574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008428"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012551"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00021957"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022515"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU362085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS51199"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="CTQ74435.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="503" mass="55730" checksum="818C89660DFBB60A" modified="2015-12-09" version="1">MTTRLSGAGMKGTLQKVETEEDVQRLAPHNAEAERQLLGAILVNNETFYRVSDFLEPHHFFVPPHQDVYEKIGHLIRAGKTASPITLKTFYPADAKIADLSATQFLLRLAGDAASIINAEDYGRTIYDLAIRRNLIRIGEDMVNIAFDAPIDVPPEQQIDDAERRLFELAETGRSEGGFVSFGDALTETIEMAHAAYNREGALSGISTGLRELDRLMGGLQHSDLIVLAGRPAMGKTSLATNIAYNIAQSYQAEEQPDGSIKTVNGGVVGFFSLEMSAEQLATRIISEQAEISSSKIRRGDISEAEFEKLAACAQTMQSVPLHVDQTGGISIASLVAKARRLKRQRGLDLLIVDYIQLLSGSAKNQGNRVQEITEITTGLKALAKELNVPIIALSQLSRQVESRDDKRPMMSDLRESGSIEQDADVVMFVFREEYYLSKTEPDEGSPEYEIWRDNMERLKGKAEVILAKQRHGPTGTANLHFEGQYTRFSDLAEDDHLPERYE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHF3</accession>
    <name>A0A0M7AHF3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Adenylate cyclase 1</fullName>
            <ecNumber evidence="4">4.6.1.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">cyaA_14</name>
        <name evidence="4" type="ORF">LAX5112_03419</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="4.6.1.1" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ73054.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03419"/>
    <dbReference type="EnsemblBacteria" id="CTQ73054">
        <property type="protein sequence ID" value="CTQ73054"/>
        <property type="gene ID" value="LAX5112_03419"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004016">
        <property type="term" value="F:adenylate cyclase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009190">
        <property type="term" value="P:cyclic nucleotide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035556">
        <property type="term" value="P:intracellular signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07302">
        <property type="entry name" value="CHD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1230">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001054">
        <property type="entry name" value="A/G_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00211">
        <property type="entry name" value="Guanylate_cyc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00044">
        <property type="entry name" value="CYCc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50125">
        <property type="entry name" value="GUANYLATE_CYCLASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0456">Lyase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="56"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="3">
        <location>
            <begin position="384"/>
            <end position="438"/>
        </location>
    </feature>
    <feature type="domain" description="Guanylate cyclase" evidence="2">
        <location>
            <begin position="464"/>
            <end position="596"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ73054.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="648" mass="70797" checksum="D0F6ABF264A12F6B" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AI41</accession>
    <name>A0A0M7AI41_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative metal-dependent hydrolase of the TIM-barrel fold protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03899</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74549.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673235.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03899"/>
    <dbReference type="EnsemblBacteria" id="CTQ74549">
        <property type="protein sequence ID" value="CTQ74549"/>
        <property type="gene ID" value="LAX5112_03899"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006680">
        <property type="entry name" value="Amidohydro-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032466">
        <property type="entry name" value="Metal_Hydrolase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04909">
        <property type="entry name" value="Amidohydro_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51556">
        <property type="entry name" value="SSF51556"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809344" evidence="1">
        <location>
            <begin position="22"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="domain" description="Amidohydro-rel" evidence="2">
        <location>
            <begin position="137"/>
            <end position="284"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF04909"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ74549.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="295" mass="33274" checksum="C0517AD8743A8D59" modified="2015-12-09" version="1">MGFKSTATAILALGAFSAAHAAGPDGPPIGAAIKDIPLFDAHVHYKEPAWQRFPVETIIELMDENGVAMALVSSTPDEGTIMLWEYAPNRIVPELRPYHGAAGSSNWTKTEGMDAYLETRLETYPHEGIGEFHIHRLDTSDELLFRKIIKMAKDRDIYLHVHSGAEPIRWLYGLDPDVKIIWAHAGLSTPASEVYALMEAFPDLLADTSLREWEIAGPGDKLSPEWVEIILDFQDRLMIGSDTWVNSQWENYSAIMDMNRMWLSQFPREIAEKLAYKNAERVFGRKISMEQVGTR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJ80</accession>
    <name>A0A0M7AJ80_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Cellulose synthase subunit BcsC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_04046</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ74939.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673335.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04046"/>
    <dbReference type="EnsemblBacteria" id="CTQ74939">
        <property type="protein sequence ID" value="CTQ74939"/>
        <property type="gene ID" value="LAX5112_04046"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_repeat"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13181">
        <property type="entry name" value="TPR_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00028">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="7"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="SSF48452"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50005">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0802">TPR repeat</keyword>
    <feature type="repeat" description="TPR" evidence="1">
        <location>
            <begin position="73"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="323"/>
            <end position="418"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="326"/>
            <end position="374"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00339"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ74939.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="418" mass="44609" checksum="5A17176566DD82F0" modified="2015-12-09" version="1">MTAAAREIYDQALGYEANGDLLRAKTGYMRASDMLPHDTEIAYRAASALLRTGELEEAQSRLRRLIFADPSHINARSSLANCQLLMNDLELAESNFREVLDRDPDHKNALFGLSNLLLKRKQARLAAPYAQRLSALLPNSPAAQTIVAEVLEKGGQAPQAVAAYRKLLKNAPNHIPALLGLARTLLKSKRYDDVISLAVRAAEQDADNYYAFDMLSQALEGRGDLEDSLEAASEALRLAPNKTGLLTRLSVICRKLGKFGAALRYALQAIDANPENRGPANALGAALAAMKFPNQARVVLTSGSGKDLDPEIRTLVEKLIKASEGGAKSTKSTSASVGNADSKAAQSSESDQETAEIDNANETAAESVSADGTEARQTEAGDKTEAIPASGDGEKPIFGAGPDEPLPNVLGLSRRDMS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJU4</accession>
    <name>A0A0M7AJU4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Bcr/CflA family efflux transporter</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">bcr_1</name>
        <name evidence="9" type="ORF">LAX5112_03987</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cell inner membrane</location>
            <topology evidence="7">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the major facilitator superfamily. Bcr/CmlA family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74821.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673280.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74821">
        <property type="protein sequence ID" value="CTQ74821"/>
        <property type="gene ID" value="LAX5112_03987"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042910">
        <property type="term" value="F:xenobiotic transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990961">
        <property type="term" value="P:xenobiotic detoxification by transmembrane export across the plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004812">
        <property type="entry name" value="Efflux_drug-R_Bcr/CmlA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00710">
        <property type="entry name" value="efflux_Bcr_CflA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="7" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3 7" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="5"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="43"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="74"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="99"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="132"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="162"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="212"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="248"/>
            <end position="266"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="278"/>
            <end position="298"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="304"/>
            <end position="330"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="342"/>
            <end position="363"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="369"/>
            <end position="389"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="8">
        <location>
            <begin position="8"/>
            <end position="393"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006236"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU365088"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ74821.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="400" mass="42211" checksum="F58372C828FEF554" modified="2015-12-09" version="1">MSIGFVRSAVVLGLLAVVGPFAIDLYLPAMPQIVADLNTDDAAVQFTFTVYFIAFGLAQLIYGPLADRYGRRLPVFLGLVVYIIGSLMCAWAPDVDALTLGRLVQAIGAGAPMVIVRAVVRDLHTGTEATRLMALVMLVFSISPMLAPLAGSVLITFGSWRLIFLTLGVLAFASMVMIYFQLPETLPPERRSKIDAAALVRSTIYLSGDARFLGLTLIGGFALASFFVFIAAAPLVYMTQYELTPTGFSIVFAINAVGFFASSQFAAPLGERFGMARVAFVGVGGFTAATTTLFLLVWSGLDGLPILMALLFVANSFLGQVIAPAMVMALEDHGEHAGMASSLGGTLQMVAGGVMIGLCTPFFDRTALPLTGAIAACAIITLALALVTFRPARRGDAPAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AK96</accession>
    <name>A0A0M7AK96_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03934</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74650.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74650">
        <property type="protein sequence ID" value="CTQ74650"/>
        <property type="gene ID" value="LAX5112_03934"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ74650.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="78" mass="8917" checksum="AD805AABC48023AC" modified="2015-12-09" version="1">MPDIEDVVNELKQTRDEVKLKIHLGSKELQEEWDELEKKWDSFEAEAKLGESAQNISEATSLLGDELSKAFKKIRSAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKJ7</accession>
    <name>A0A0M7AKJ7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">UPF0056 membrane protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">LAX5112_04039</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cell membrane</location>
            <topology evidence="7">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the UPF0056 (MarC) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ74926.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008189976.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04039"/>
    <dbReference type="EnsemblBacteria" id="CTQ74926">
        <property type="protein sequence ID" value="CTQ74926"/>
        <property type="gene ID" value="LAX5112_04039"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002771">
        <property type="entry name" value="Multi_antbiot-R_MarC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33508">
        <property type="entry name" value="PTHR33508"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01914">
        <property type="entry name" value="MarC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00427">
        <property type="entry name" value="TIGR00427"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="6"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="40"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="65"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="118"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="148"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="190"/>
            <end position="210"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009784"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU362048"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ74926.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="211" mass="22206" checksum="E3597B2750022EC8" modified="2015-12-09" version="1">MIDFYINAFATLFVTIDPVGLAPMFLAITAGMSSADRRRVAVRATITATGILGLFYFTGQTVLNVLGISVSAFRVAGGILLFLIAIEMIFGKRQERKSETAEKAMESAEAHHATINELAIFPLAIPLISGPAAISAIILLSSQAPDTLTYAGLGGVILIILVSCLGAFLLAERIERALGDTAQLVITRLLGVLLAALSVQFVADGILAFLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="31" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AL52</accession>
    <name>A0A0M7AL52_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">envZ_1</name>
        <name evidence="9" type="ORF">LAX5112_04138</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75182.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008193445.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04138"/>
    <dbReference type="EnsemblBacteria" id="CTQ75182">
        <property type="protein sequence ID" value="CTQ75182"/>
        <property type="gene ID" value="LAX5112_04138"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0418">Kinase</keyword>
    <keyword evidence="6" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 9" id="KW-0808">Transferase</keyword>
    <keyword evidence="6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="39"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="186"/>
            <end position="207"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="8">
        <location>
            <begin position="208"/>
            <end position="260"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="7">
        <location>
            <begin position="268"/>
            <end position="464"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ75182.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="464" mass="52585" checksum="981AAD26B6A0FF22" modified="2015-12-09" version="1">MASIESFLQRYAAFLPVKAVHRGYRRVSRFLYRVMPKGLYTRTFLIIVIPVVILQSVIAFVFMERHYQLVSRRMSEAVVREIAAVVYVLENYPQDPEHTKIEELGARALGMSMSILPLEPLPPPAPKPFFDVIDQELSKAISQRIGRPFWIDTVGRSRFVEIRIQLQNEVLRVFTRRSQTFASNSHIFLVWMFSTALVLIIIALLFLRNQMRPIIRLANAAEAFGKGRPVGDYKASGALEVRRAGVAFADMRRRIERQIDQRTTMLAGVSHDLRTILTRMRLQLAFLGDTPESEAMRKDVDEMSNMLEDYLAFAKGDGDEEPQETDVALLFEELEEESEISGNDVKASFDGPSEVLLRRNSMKRCLSNLVTNGCKYGQSVELNGTIEHDWLIITVDDDGPGIPEDQRDMAFRAFHRLDLARNQDKTGSGLGLAIARDITRSHGGDLYLEDSPIGGLRARLRIPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALA6</accession>
    <name>A0A0M7ALA6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04142</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75196.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008190119.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04142"/>
    <dbReference type="EnsemblBacteria" id="CTQ75196">
        <property type="protein sequence ID" value="CTQ75196"/>
        <property type="gene ID" value="LAX5112_04142"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019660">
        <property type="entry name" value="Put_sensory_transdc_reg_YbjN"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10722">
        <property type="entry name" value="YbjN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ75196.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="166" mass="18637" checksum="C77383E5F2143944" modified="2015-12-09" version="1">MSLIEIDFERPENPVDTIETVAALNDWTFERSDDDEITISIAGNWCDYHVSFSWMEDVEALHLACAFDLKVTELRKTEVVRLLALVNEQLWAGHFDLWSKEGVVMFRQSLLLAGGAEPTSAQIEAMLANALENCERFYQAFQFVVWAGHSASEALSTALFETAGEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALB6</accession>
    <name>A0A0M7ALB6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04188</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75331.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673429.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04188"/>
    <dbReference type="EnsemblBacteria" id="CTQ75331">
        <property type="protein sequence ID" value="CTQ75331"/>
        <property type="gene ID" value="LAX5112_04188"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="SSF52317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="38"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="666"/>
            <end position="687"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75331.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="691" mass="74766" checksum="9B20BD9892EB0038" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALI0</accession>
    <name>A0A0M7ALI0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Alcohol dehydrogenase [acceptor]</fullName>
            <ecNumber evidence="6">1.1.99.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">alkJ_3</name>
        <name evidence="6" type="ORF">LAX5112_04114</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the GMC oxidoreductase family.</text>
    </comment>
    <dbReference type="EC" id="1.1.99.-" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ75090.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673372.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04114"/>
    <dbReference type="EnsemblBacteria" id="CTQ75090">
        <property type="protein sequence ID" value="CTQ75090"/>
        <property type="gene ID" value="LAX5112_04114"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016614">
        <property type="term" value="F:oxidoreductase activity, acting on CH-OH group of donors"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012132">
        <property type="entry name" value="GMC_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000172">
        <property type="entry name" value="GMC_OxRdtase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007867">
        <property type="entry name" value="GMC_OxRtase_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11552">
        <property type="entry name" value="PTHR11552"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05199">
        <property type="entry name" value="GMC_oxred_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00732">
        <property type="entry name" value="GMC_oxred_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000137">
        <property type="entry name" value="Alcohol_oxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00623">
        <property type="entry name" value="GMC_OXRED_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00624">
        <property type="entry name" value="GMC_OXRED_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3" id="KW-0274">FAD</keyword>
    <keyword evidence="3" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GMC_OxRdtase_N" evidence="4">
        <location>
            <begin position="81"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="domain" description="GMC_OxRdtase_N" evidence="5">
        <location>
            <begin position="254"/>
            <end position="268"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="83"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <begin position="91"/>
            <end position="94"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010790"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR000137-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU003968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS00623"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS00624"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ75090.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="540" mass="59167" checksum="941D8C09372E331A" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALP3</accession>
    <name>A0A0M7ALP3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Bacterial extracellular solute-binding proteins, family 3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_04364</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75799.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04364"/>
    <dbReference type="EnsemblBacteria" id="CTQ75799">
        <property type="protein sequence ID" value="CTQ75799"/>
        <property type="gene ID" value="LAX5112_04364"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809582" evidence="2">
        <location>
            <begin position="29"/>
            <end position="260"/>
        </location>
    </feature>
    <feature type="domain" description="PBPb" evidence="3">
        <location>
            <begin position="44"/>
            <end position="226"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00497"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ75799.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="260" mass="28665" checksum="2AB753549FDC94FB" modified="2015-12-09" version="1">MFRSHRIRARICWACLSALVLSLTSAVALSVMPRPSAAETGPVILTTHDLPPYGSVQADGSFDGIAVRVVSCALHAIDRAFEIHVLPWKRAQLEVQNGYADGFFAASQNARRDAYATASAIIARQTWTWYLLKDQILSPKDPANRLSMLTSSFLGANMQTWLRRNGYRTTDFPPRDTNALLEMLLAGRVDAVLANNLVMESILDSRGVLSEIRSEVQQDKPLSVYFSNDFLQLNPDFLAEFDAAVPDCRDAEAASGDINS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="33" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALQ6</accession>
    <name>A0A0M7ALQ6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Transcriptional regulatory protein ZraR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">zraR_4</name>
        <name evidence="10" type="ORF">LAX5112_04200</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75356.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008190040.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04200"/>
    <dbReference type="EnsemblBacteria" id="CTQ75356">
        <property type="protein sequence ID" value="CTQ75356"/>
        <property type="gene ID" value="LAX5112_04200"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002197">
        <property type="entry name" value="HTH_Fis"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002078">
        <property type="entry name" value="Sigma_54_int"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025662">
        <property type="entry name" value="Sigma_54_int_dom_ATP-bd_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025943">
        <property type="entry name" value="Sigma_54_int_dom_ATP-bd_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029995">
        <property type="entry name" value="TR_FlbD/FleR/FlgR"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32071:SF21">
        <property type="entry name" value="PTHR32071:SF21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02954">
        <property type="entry name" value="HTH_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00158">
        <property type="entry name" value="Sigma54_activat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01590">
        <property type="entry name" value="HTHFIS"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00675">
        <property type="entry name" value="SIGMA54_INTERACT_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00676">
        <property type="entry name" value="SIGMA54_INTERACT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50045">
        <property type="entry name" value="SIGMA54_INTERACT_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0010">Activator</keyword>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0804">Transcription</keyword>
    <keyword evidence="4" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="3" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="domain" description="Response regulatory" evidence="9">
        <location>
            <begin position="2"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="domain" description="Sigma-54 factor interaction" evidence="8">
        <location>
            <begin position="120"/>
            <end position="349"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023159"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50045"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ75356.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="450" mass="48508" checksum="B399F3B573AAC2BB" modified="2015-12-09" version="1">MRLLIVGTLGGQLTAASKIAMQRGAQVTHADDVEGALKVLRSGRGADLLMVEVHLDIEGLIAKLQTERVHVPVVACGVETDAQAAVSAIRAGAKEYIPLPPDPELIAAVLAAVAQDRGDLIYRDDAMASVVKLAEQVAPSEASVLITGESGTGKEVIARHVHKSSNRASKPFISINCAAIPEHLLESELFGHEKGAFTGAVARRIGKFEEADGGTLLLDEISEMDVRLQAKLLRAIQERVIDRVGGTRPVPVNIRILATSNRDLAESVRSGSFREDLLFRLNVVNLKLPPLRERPADIMELAQFFIAHYSEANGVPVRQLSLEARQALMSNQWQGNVRELENTMHRAILLASGAEIGVEAIRMPDGTPLSAARGPAERAAQTAEAVTRNFVGRTVADVERDLILDTLDHCLGNRTHAAKILGISIRTLRNKLNQYTDEGVQVPSPGEARG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALS6</accession>
    <name>A0A0M7ALS6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6 7">Polyphosphate kinase</fullName>
            <ecNumber evidence="6 7">2.7.4.1</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">ATP-polyphosphate phosphotransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">Polyphosphoric acid kinase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6 13" type="primary">ppk</name>
        <name evidence="13" type="ORF">LAX5112_03904</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6 7">Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6 7">
            <text>[phosphate](n) + ATP = [phosphate](n+1) + ADP</text>
            <dbReference type="Rhea" id="RHEA:19573"/>
            <dbReference type="Rhea" id="RHEA-COMP:9859"/>
            <dbReference type="Rhea" id="RHEA-COMP:14280"/>
            <dbReference type="ChEBI" id="CHEBI:16838"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.4.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="PTM">
        <text evidence="6 7">An intermediate of this reaction is the autophosphorylated ppk in which a phosphate is covalently linked to a histidine residue through a N-P bond.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6 7">Belongs to the polyphosphate kinase 1 (PPK1) family.</text>
    </comment>
    <dbReference type="EC" id="2.7.4.1" evidence="6 7"/>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74564.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03904"/>
    <dbReference type="EnsemblBacteria" id="CTQ74564">
        <property type="protein sequence ID" value="CTQ74564"/>
        <property type="gene ID" value="LAX5112_03904"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009358">
        <property type="term" value="C:polyphosphate kinase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008976">
        <property type="term" value="F:polyphosphate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006799">
        <property type="term" value="P:polyphosphate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1840.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00347">
        <property type="entry name" value="Polyphosphate_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003414">
        <property type="entry name" value="PP_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041108">
        <property type="entry name" value="PP_kinase_C_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024953">
        <property type="entry name" value="PP_kinase_middle"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036830">
        <property type="entry name" value="PP_kinase_middle_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025200">
        <property type="entry name" value="PPK_C_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025198">
        <property type="entry name" value="PPK_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036832">
        <property type="entry name" value="PPK_N_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30218">
        <property type="entry name" value="PTHR30218"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02503">
        <property type="entry name" value="PP_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13090">
        <property type="entry name" value="PP_kinase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17941">
        <property type="entry name" value="PP_kinase_C_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13089">
        <property type="entry name" value="PP_kinase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF015589">
        <property type="entry name" value="PP_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF140356">
        <property type="entry name" value="SSF140356"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03705">
        <property type="entry name" value="poly_P_kin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 6 13" id="KW-0418">Kinase</keyword>
    <keyword evidence="6" id="KW-0460">Magnesium</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="1 6 7" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6 7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PP_kinase_N" evidence="10">
        <location>
            <begin position="40"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="domain" description="PP_kinase" evidence="9">
        <location>
            <begin position="153"/>
            <end position="350"/>
        </location>
    </feature>
    <feature type="domain" description="PP_kinase_C_1" evidence="12">
        <location>
            <begin position="360"/>
            <end position="524"/>
        </location>
    </feature>
    <feature type="domain" description="PP_kinase_C" evidence="11">
        <location>
            <begin position="531"/>
            <end position="707"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="717"/>
            <end position="740"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="8">
        <location>
            <begin position="1"/>
            <end position="17"/>
        </location>
    </feature>
    <feature type="active site" description="Phosphohistidine intermediate" evidence="6">
        <location>
            <position position="463"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="78"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="403"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="433"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="496"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="592"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="620"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00347"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003800"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF02503"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF13089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF13090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF17941"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="CTQ74564.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="740" mass="83620" checksum="06B466297F1E5CE4" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMA2</accession>
    <name>A0A0M7AMA2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">L-lactate utilization operon repressor</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">lutR_3</name>
        <name evidence="5" type="ORF">LAX5112_04282</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000022">
        <property type="protein sequence ID" value="CTQ75556.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673517.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000022.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04282"/>
    <dbReference type="EnsemblBacteria" id="CTQ75556">
        <property type="protein sequence ID" value="CTQ75556"/>
        <property type="gene ID" value="LAX5112_04282"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07377">
        <property type="entry name" value="WHTH_GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.530">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011711">
        <property type="entry name" value="GntR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008920">
        <property type="entry name" value="TF_FadR/GntR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000524">
        <property type="entry name" value="Tscrpt_reg_HTH_GntR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07729">
        <property type="entry name" value="FCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00392">
        <property type="entry name" value="GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00035">
        <property type="entry name" value="HTHGNTR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00895">
        <property type="entry name" value="FCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00345">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48008">
        <property type="entry name" value="SSF48008"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50949">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH gntR-type" evidence="4">
        <location>
            <begin position="7"/>
            <end position="75"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ75556.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="246" mass="28190" checksum="D9F5F2D3FEB1E5AE" modified="2015-12-09" version="1">MTSDTHKRRYQEIAQILARRIAHDGYKPGDKFPTERQISEELGISRSLVREAFIMLEIEGYLDVRKGSGSYVATGEKLFLSNPKPDFGPFELLQARQLLESSIAGFAASTITKSDIVQLRDTLELERKAIANGEEDYLADRQFHLQIAEATQNSVLVAQVEELWSKRENSPMWARLHDRIFDLSYRAKWLDDHAEILEALRHRNSEAARKAMWQHLENVRLTLLELSDVGDPEFDGYLYKPAAVSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AN28</accession>
    <name>A0A0M7AN28_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Dipeptide-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">dppA_3</name>
        <name evidence="6" type="ORF">LAX5112_04308</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the bacterial solute-binding protein 5 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000022">
        <property type="protein sequence ID" value="CTQ75630.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673537.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000022.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04308"/>
    <dbReference type="EnsemblBacteria" id="CTQ75630">
        <property type="protein sequence ID" value="CTQ75630"/>
        <property type="gene ID" value="LAX5112_04308"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030288">
        <property type="term" value="C:outer membrane-bounded periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030678">
        <property type="entry name" value="Peptide/Ni-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039424">
        <property type="entry name" value="SBP_5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000914">
        <property type="entry name" value="SBP_5_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30290">
        <property type="entry name" value="PTHR30290"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00496">
        <property type="entry name" value="SBP_bac_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002741">
        <property type="entry name" value="MppA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0574">Periplasm</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809472" evidence="4">
        <location>
            <begin position="26"/>
            <end position="494"/>
        </location>
    </feature>
    <feature type="domain" description="SBP_bac_5" evidence="5">
        <location>
            <begin position="72"/>
            <end position="391"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ75630.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="494" mass="54037" checksum="89343BACC20B1EF4" modified="2015-12-09" version="1">MRLGKVGTGLISALALSASMGLAHAKSDITVAMQLEPPHLDPTSAAAGAIDSVLYSNVFEGLTRFGPDGSILPGLAESWEISEDGKTYTFKLQSGVKFHDSTDMTAEDVKFSLDRARSDDSQNAQKALFTGIESVEVVDPQTVAVTLSTPNGSLLFNLAWGDAVIVAPESIENIKTNPIGTGAFRFSNWVQGDRIDLEKNTDYWGTPAKLDNVTFKFISDPTAAFAAVMAEDVNAFVGFPAPENLPQFEADPRFQVLVGSTEGETILSTNNKLPPLDDVKVREAIAHAIDRQAIIDGAMFGYGTPIGTHFAPHNPDYVDLTANSAYDPELSKKLLAEAGYPDGFTTTLKLPPPSYARRGGEIIAAQLRAVGIETEISNLEWAQWLEQVFRGKDYGLTIVSHVEPMDIGIYARPDYYFQYDNPEFQKLFENLTAENDPEKRSELLKQAQEMLSKDYVNGYLFQLAFPTVANAKIKGLWVNQPTPAADMTAVYWEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AN96</accession>
    <name>A0A0M7AN96_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Major tail sheath protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04403</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75902.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04403"/>
    <dbReference type="EnsemblBacteria" id="CTQ75902">
        <property type="protein sequence ID" value="CTQ75902"/>
        <property type="gene ID" value="LAX5112_04403"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ75902.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="376" mass="40138" checksum="35431CA975F00D95" modified="2015-12-09" version="1">MGASPTEFPIDDPKRFSSSETDAVEALGTGLLRAEVQGINDQLNSVNAGADITVFRVPEGADVAATSAAIAEVINSITDIPSAVNCTPRIVRAGRTAWRVDLDTTNPVVAALEANLGKILAFAPVDVDDTSSALAIDARETMGSERVMPIGVAARVWEGESIVTRPMGSRVAGIMMRVDNENEGLPFNPFANQPIFGLAGLSRKIPFSMLDGSVEGQQMLAANVAIVAEGEAGVDGAVADGGYRLIGTDNAMTGELWEQAHQVRGTDYIVTQFMQITREKLGKRITADGVEAWINSLAFALRDHKAADNILGYTPRDQMFKANQNSPEKIRLGSLKVDIGIEPAPVFKLASHEIRRYRPAVEGLVNDIIARLSQAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANC6</accession>
    <name>A0A0M7ANC6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Putative acyl-CoA dehydrogenase AidB</fullName>
            <ecNumber evidence="9">1.3.99.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">aidB_3</name>
        <name evidence="9" type="ORF">LAX5112_04442</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 5">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the acyl-CoA dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.3.99.-" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ76031.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673690.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000024.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04442"/>
    <dbReference type="EnsemblBacteria" id="CTQ76031">
        <property type="protein sequence ID" value="CTQ76031"/>
        <property type="gene ID" value="LAX5112_04442"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003995">
        <property type="term" value="F:acyl-CoA dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006089">
        <property type="entry name" value="Acyl-CoA_DH_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006091">
        <property type="entry name" value="Acyl-CoA_Oxase/DH_mid-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036250">
        <property type="entry name" value="AcylCo_DH-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009075">
        <property type="entry name" value="AcylCo_DH/oxidase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009100">
        <property type="entry name" value="AcylCoA_DH/oxidase_NM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041504">
        <property type="entry name" value="AidB_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00441">
        <property type="entry name" value="Acyl-CoA_dh_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02770">
        <property type="entry name" value="Acyl-CoA_dh_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18158">
        <property type="entry name" value="AidB_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47203">
        <property type="entry name" value="SSF47203"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56645">
        <property type="entry name" value="SSF56645"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00073">
        <property type="entry name" value="ACYL_COA_DH_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0274">FAD</keyword>
    <keyword evidence="3 5" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="5 9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AidB_N" evidence="8">
        <location>
            <begin position="21"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="domain" description="Acyl-CoA_dh_M" evidence="7">
        <location>
            <begin position="191"/>
            <end position="288"/>
        </location>
    </feature>
    <feature type="domain" description="Acyl-CoA_dh_1" evidence="6">
        <location>
            <begin position="302"/>
            <end position="457"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009347"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU362125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00441"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF02770"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF18158"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ76031.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="595" mass="65737" checksum="2D60913A382E4FC3" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AP92</accession>
    <name>A0A0M7AP92_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative oxidoreductase YvaA</fullName>
            <ecNumber evidence="3">1.-.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yvaA</name>
        <name evidence="3" type="ORF">LAX5112_04562</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.-.-.-" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000026">
        <property type="protein sequence ID" value="CTQ76341.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673756.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000026.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04562"/>
    <dbReference type="EnsemblBacteria" id="CTQ76341">
        <property type="protein sequence ID" value="CTQ76341"/>
        <property type="gene ID" value="LAX5112_04562"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004104">
        <property type="entry name" value="Gfo/Idh/MocA-like_OxRdtase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000683">
        <property type="entry name" value="Gfo/Idh/MocA-like_OxRdtase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01408">
        <property type="entry name" value="GFO_IDH_MocA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02894">
        <property type="entry name" value="GFO_IDH_MocA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GFO_IDH_MocA" evidence="1">
        <location>
            <begin position="5"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="domain" description="GFO_IDH_MocA_C" evidence="2">
        <location>
            <begin position="142"/>
            <end position="361"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01408"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02894"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ76341.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="367" mass="39983" checksum="E605B06E55E36B20" modified="2015-12-09" version="1">MAEIGIGILGGGYMGKAHAVAMSAVGAVFNTALRPRLEMVCASSLASAEKYRDAFGFNRAAANWQELVEDPRVEAIVIASPQSTHRDIAEAAFSLNKPVLCEKPMGASLEDSEAMVAAAENSGCVNMVAYNYIRTPASQYARKLIADGVIGNITWFRGEHTEDFFADPMAPASWRTDGDANGTMGDLAPHMINAALALVGPVRSVMAEIERVHENRPGGKVTNDDHGQMMTRFENGAMGHMYFSRIATGRKMGYAYEITGTKGAIRFDQEDQNALWLYLMDDKEADRGFRKILTGPAHPDYLPFCQGPGHGTGYQDQIIIEAKDFLEAIHSGASIWPTFRDGLAVKHIVEAAMESSRTKSWQPLKST</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APB3</accession>
    <name>A0A0M7APB3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Putative aliphatic sulfonates transport permease protein SsuC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ssuC_7</name>
        <name evidence="7" type="ORF">LAX5112_04544</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000025">
        <property type="protein sequence ID" value="CTQ76272.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673732.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000025.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04544"/>
    <dbReference type="EnsemblBacteria" id="CTQ76272">
        <property type="protein sequence ID" value="CTQ76272"/>
        <property type="gene ID" value="LAX5112_04544"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="34"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="88"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="116"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="147"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="199"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="243"/>
            <end position="264"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="81"/>
            <end position="261"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ76272.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="273" mass="29212" checksum="775FF53FE1D7A86C" modified="2015-12-09" version="1">MADASVSESRKDTAQTVRFRGGGFAPKPRRWTGIAVFAVLILVMEWGTQSGWISALTLPKPSDVLRTLVELYQSGQFTAHMLPSLTRLAVGGFLGAVAGIGTGILIGLFSYARSGLVPLVAALFPVPKIALLPLFVIWFGIDEGSKYALIAFGTFTPTVVATYGAVDNVDRTLIRMGQSFGLSWLSIVRKIILPGAMPGILSGLRISLAIAIILLTAAEMLGAEYGIGAYVLQAGSLYDLDRLFAGVVILSLLGVILNMVIGFLERRLLVWRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APD2</accession>
    <name>A0A0M7APD2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative enoyl-CoA hydratase 1</fullName>
            <ecNumber evidence="2">4.2.1.17</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04768</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="4.2.1.17" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000030">
        <property type="protein sequence ID" value="CTQ76988.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673931.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000030.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04768"/>
    <dbReference type="EnsemblBacteria" id="CTQ76988">
        <property type="protein sequence ID" value="CTQ76988"/>
        <property type="gene ID" value="LAX5112_04768"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004300">
        <property type="term" value="F:enoyl-CoA hydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd03450">
        <property type="entry name" value="NodN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029069">
        <property type="entry name" value="HotDog_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002539">
        <property type="entry name" value="MaoC-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039375">
        <property type="entry name" value="NodN-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01575">
        <property type="entry name" value="MaoC_dehydratas"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54637">
        <property type="entry name" value="SSF54637"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MaoC-like" evidence="1">
        <location>
            <begin position="19"/>
            <end position="125"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01575"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76988.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="162" mass="17819" checksum="169E44122E820CD9" modified="2015-12-09" version="1">MIPDLDRTDLSVEALSGLVGKEVGVSSWHRIDQVMIEAFADVTKDHQHIHVDPAAAASTPFGGTIAHGFLTLSLLSVMGLEAQPKIRGMTMGINYGFNRVRFLNPVKSGSRIRGRFVLKEVKALKPSELDVTWASTVEIEDESRPALSADWLNRFYLEADAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APF9</accession>
    <name>A0A0M7APF9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Spermidine/putrescine import ATP-binding protein PotA</fullName>
            <ecNumber evidence="9">7.6.2.11</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">ugpC_5</name>
        <name evidence="9" type="synonym">potA</name>
        <name evidence="11" type="ORF">LAX5112_04777</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.</text>
    </comment>
    <comment type="subunit">
        <text evidence="9">The complex is composed of two ATP-binding proteins (PotA), two transmembrane proteins (PotB and PotC) and a solute-binding protein (PotD).</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.</text>
    </comment>
    <dbReference type="EC" id="7.6.2.11" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000030">
        <property type="protein sequence ID" value="CTQ77015.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673950.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000030.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77015">
        <property type="protein sequence ID" value="CTQ77015"/>
        <property type="gene ID" value="LAX5112_04777"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015417">
        <property type="term" value="F:ABC-type polyamine transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008995">
        <property type="entry name" value="Mo/tungstate-bd_C_term_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005893">
        <property type="entry name" value="Sp_pt_ABC_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013611">
        <property type="entry name" value="Transp-assoc_OB_typ2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08402">
        <property type="entry name" value="TOBE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50331">
        <property type="entry name" value="SSF50331"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01187">
        <property type="entry name" value="potA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 8 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 9" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="11" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="4 8 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 9" id="KW-1278">Translocase</keyword>
    <keyword evidence="2 9" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ABC transporter" evidence="10">
        <location>
            <begin position="9"/>
            <end position="240"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="42"/>
            <end position="49"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU364083"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ77015.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="364" mass="40497" checksum="C7EBDCFE65560449" modified="2015-12-09" version="1">MANNRGAAVKYDSVQKSYDGESLVVKNLNLDIPPGEFLTMLGPSGSGKTTCLMMLAGFEPATHGEIYLNDRPINNVPPHKRGIGMVFQNYALFPHMTVSENLAFPLQVRNVSKAEQEQKVQRALDMVELGSFGNRRPAQLSGGQQQRVAVARALVFDPELVLMDEPLGALDKQLREQMQYEIKHIHENLGVTVVYVTHDQTEALTMSDRVAVFNDGVIQQLSTPDDLYEDPQNSFVAQFIGENNKLNGKVIDIQGEECRVELGDGTQLKADRVNVSSVGDKTTLSLRPERVEFDTHDSMDNIVNGRIEELIYLGDHIRVRMNVAGNDEFIVKVRNRGEKRKLHVGETVPVGWSLNDCKALDAVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APG0</accession>
    <name>A0A0M7APG0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Bacteriophytochrome cph2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">cph2_15</name>
        <name evidence="4" type="ORF">LAX5112_04265</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75504.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673495.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000021.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04265"/>
    <dbReference type="EnsemblBacteria" id="CTQ75504">
        <property type="protein sequence ID" value="CTQ75504"/>
        <property type="gene ID" value="LAX5112_04265"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd01948">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01949">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00130">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.450">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001633">
        <property type="entry name" value="EAL_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035919">
        <property type="entry name" value="EAL_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000160">
        <property type="entry name" value="GGDEF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000014">
        <property type="entry name" value="PAS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035965">
        <property type="entry name" value="PAS-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00563">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00990">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13426">
        <property type="entry name" value="PAS_9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00052">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00267">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141868">
        <property type="entry name" value="SSF141868"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55785">
        <property type="entry name" value="SSF55785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00254">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00229">
        <property type="entry name" value="sensory_box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50883">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50887">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50112">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PAS" evidence="1">
        <location>
            <begin position="27"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="domain" description="GGDEF" evidence="3">
        <location>
            <begin position="208"/>
            <end position="341"/>
        </location>
    </feature>
    <feature type="domain" description="EAL" evidence="2">
        <location>
            <begin position="350"/>
            <end position="601"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50112"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ75504.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="616" mass="67872" checksum="97B46CCCB6110AA5" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APY9</accession>
    <name>A0A0M7APY9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Stage 0 sporulation protein KE</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">oppF_3</name>
        <name evidence="8" type="ORF">LAX5112_04555</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000026">
        <property type="protein sequence ID" value="CTQ76320.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673750.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000026.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04555"/>
    <dbReference type="EnsemblBacteria" id="CTQ76320">
        <property type="protein sequence ID" value="CTQ76320"/>
        <property type="gene ID" value="LAX5112_04555"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015833">
        <property type="term" value="P:peptide transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013563">
        <property type="entry name" value="Oligopep_ABC_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08352">
        <property type="entry name" value="oligo_HPY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01727">
        <property type="entry name" value="oligo_HPY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ABC transporter" evidence="7">
        <location>
            <begin position="19"/>
            <end position="290"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="52"/>
            <end position="59"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ76320.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="363" mass="40720" checksum="A2B79B35706BE6FB" modified="2015-12-09" version="1">MTTGNVLIEVRDLEVHFPIQKKKLFSSKVQTLRAVDGVSFNINRGETVGLVGESGSGKTTVGRAILRAIDPSYGDVFFHTIDDDVDLTNAEGEELRKFRKHMNMVFSEGPVQLSSLAAERLRLFRSKMSLVFQDPYSSLNPRMTVRDIIAEPLIASGMMKDRDAIDARVREIASRCKLNLEHLRRFPHAFSGGQRQRICIARALVSKPDFVVCDESVSALDVSIQAEIVNLLKDLQEEMGVAFLFIAHDLSVVAQMSHKVAVMYVGKFVEYGPTENLFFNPKHPYTHALLSAIPQADPDAEFNPIKLTGEIPNPLDAPEGCRFNTRCPFANDRCATKAPEWRELEPEHYVACHYSETFDFSRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARQ6</accession>
    <name>A0A0M7ARQ6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Cupin domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04541</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000025">
        <property type="protein sequence ID" value="CTQ76264.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673730.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000025.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04541"/>
    <dbReference type="EnsemblBacteria" id="CTQ76264">
        <property type="protein sequence ID" value="CTQ76264"/>
        <property type="gene ID" value="LAX5112_04541"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013096">
        <property type="entry name" value="Cupin_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07883">
        <property type="entry name" value="Cupin_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cupin_2" evidence="1">
        <location>
            <begin position="45"/>
            <end position="110"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76264.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="140" mass="15529" checksum="860F85996EB7495B" modified="2015-12-09" version="1">MSVLTVYEAGSRPTKRANPDYFTGTVWQDPVIEAPAPARVQAVKVTFEPGARTHWHTHPLGQTLQILSGAGFVHLWGQDKLSIMPGDVIWIPPGIKHWHGAARHVSMVHLAIHEAENGSVAEWLEPVDEATYRGDLEARR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AS21</accession>
    <name>A0A0M7AS21_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Gcv operon activator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">gcvA_13</name>
        <name evidence="3" type="ORF">LAX5112_04573</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000026">
        <property type="protein sequence ID" value="CTQ76374.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673781.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000026.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04573"/>
    <dbReference type="EnsemblBacteria" id="CTQ76374">
        <property type="protein sequence ID" value="CTQ76374"/>
        <property type="gene ID" value="LAX5112_04573"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00039">
        <property type="entry name" value="HTHLYSR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="6"/>
            <end position="63"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ76374.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="279" mass="29718" checksum="B96CEC1FB3EB925E" modified="2015-12-09" version="1">MASALPPLNWFRAFEAAARHLSFTAAGNEIGMTQSAVSQQIKALETKLGVPLFERKARGLALTDDGRRLLPQVDAALDTLTAATRSFIPDQPKKLLTISVSVSVLQWVIGPTLPAFRAKHPDITLRFIGAIWPDEFSRSLADVIISFGSRKQAGSNAALLGSDKLTALAPRDMISSLDTCPVIGTVGISGGWSKWMAATGISCADPTIYVDSYGAALDLASNGNGICLVNETLAQHAVQSGSVELVSPITIDANEAYFVETNPASQDAETFRKWLESTV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASL3</accession>
    <name>A0A0M7ASL3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Beta-ketoacyl-acyl-carrier-protein synthase I</fullName>
            <ecNumber evidence="6">2.3.1.41</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">ppsE</name>
        <name evidence="6" type="ORF">LAX5112_04705</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.3.1.41" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000028">
        <property type="protein sequence ID" value="CTQ76773.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673885.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000028.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04705"/>
    <dbReference type="EnsemblBacteria" id="CTQ76773">
        <property type="protein sequence ID" value="CTQ76773"/>
        <property type="gene ID" value="LAX5112_04705"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004315">
        <property type="term" value="F:3-oxoacyl-[acyl-carrier-protein] synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031177">
        <property type="term" value="F:phosphopantetheine binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006633">
        <property type="term" value="P:fatty acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044550">
        <property type="term" value="P:secondary metabolite biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1200.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.129.110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.366.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.47.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001227">
        <property type="entry name" value="Ac_transferase_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036736">
        <property type="entry name" value="ACP-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014043">
        <property type="entry name" value="Acyl_transferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016035">
        <property type="entry name" value="Acyl_Trfase/lysoPLipase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018201">
        <property type="entry name" value="Ketoacyl_synth_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014031">
        <property type="entry name" value="Ketoacyl_synth_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014030">
        <property type="entry name" value="Ketoacyl_synth_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016036">
        <property type="entry name" value="Malonyl_transacylase_ACP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032821">
        <property type="entry name" value="PKS_assoc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020841">
        <property type="entry name" value="PKS_Beta-ketoAc_synthase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020807">
        <property type="entry name" value="PKS_dehydratase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042104">
        <property type="entry name" value="PKS_dehydratase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013968">
        <property type="entry name" value="PKS_KR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020806">
        <property type="entry name" value="PKS_PP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020802">
        <property type="entry name" value="PKS_thioesterase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009081">
        <property type="entry name" value="PP-bd_ACP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001031">
        <property type="entry name" value="Thioesterase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016039">
        <property type="entry name" value="Thiolase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00698">
        <property type="entry name" value="Acyl_transf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16197">
        <property type="entry name" value="KAsynt_C_assoc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00109">
        <property type="entry name" value="ketoacyl-synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02801">
        <property type="entry name" value="Ketoacyl-synt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08659">
        <property type="entry name" value="KR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00550">
        <property type="entry name" value="PP-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14765">
        <property type="entry name" value="PS-DH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00975">
        <property type="entry name" value="Thioesterase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00827">
        <property type="entry name" value="PKS_AT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00826">
        <property type="entry name" value="PKS_DH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00825">
        <property type="entry name" value="PKS_KS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00823">
        <property type="entry name" value="PKS_PP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00824">
        <property type="entry name" value="PKS_TE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47336">
        <property type="entry name" value="SSF47336"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52151">
        <property type="entry name" value="SSF52151"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53901">
        <property type="entry name" value="SSF53901"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55048">
        <property type="entry name" value="SSF55048"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00606">
        <property type="entry name" value="B_KETOACYL_SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50075">
        <property type="entry name" value="CARRIER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="1 4" id="KW-0596">Phosphopantetheine</keyword>
    <keyword evidence="2" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Carrier" evidence="5">
        <location>
            <begin position="1760"/>
            <end position="1835"/>
        </location>
    </feature>
    <feature type="modified residue" description="O-(pantetheine 4'-phosphoryl)serine" evidence="4">
        <location>
            <position position="1795"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022450"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00258"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50075"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ76773.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="2142" mass="233009" checksum="4C5A2FE3D9704B1F" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASY6</accession>
    <name>A0A0M7ASY6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04983</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000037">
        <property type="protein sequence ID" value="CTQ77621.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04983"/>
    <dbReference type="EnsemblBacteria" id="CTQ77621">
        <property type="protein sequence ID" value="CTQ77621"/>
        <property type="gene ID" value="LAX5112_04983"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009273">
        <property type="entry name" value="DUF930"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06059">
        <property type="entry name" value="DUF930"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="37"/>
            <end position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77621.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="234" mass="25209" checksum="CC4793C2D9C1CD5C" modified="2015-12-09" version="1">MDASEIETPLPVEAGETTEPVGEPEDAAPEQADPGPEQPEALDEDETAEPVEAGATEEPEELPTPPEAIPETTLDEPVEGEPEGAETQTVVAAIPRTKPPVPAGVTSSAPRGEALRPARRLLSGDLLADGRVRTAMRGMSDSERLNLLCATELRAQLQAQNPPILPDLLPTFQTPPGLTVLRPSGAAFRTFGTWHNVDFRCQVDRAITRVESFSLRVGQPVPRSQWRSRGFPIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AT62</accession>
    <name>A0A0M7AT62_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Helix-turn-helix protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04915</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000034">
        <property type="protein sequence ID" value="CTQ77450.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04915"/>
    <dbReference type="EnsemblBacteria" id="CTQ77450">
        <property type="protein sequence ID" value="CTQ77450"/>
        <property type="gene ID" value="LAX5112_04915"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01381">
        <property type="entry name" value="HTH_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="1">
        <location>
            <begin position="14"/>
            <end position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77450.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="160" mass="17639" checksum="F707654AB98F2B75" modified="2015-12-09" version="1">MRQVRHHFGDQDREAFGKSLGVSRASLAYYERGERTPDANVLSRYRTDLGVSLEWLLTGAGEMFADTSAVPSGPSFHTIRPDLFREVGRLVAKLHKAEGITLPPDALFDEQSSAYNALIERAEDPSDVDELSSLLPWLETRLKRQLSAAKAEPGAGKRGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZMG1</accession>
    <name>A0A0M6ZMG1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Ribosomal-protein-alanine acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00130</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63965.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670156.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ63965">
        <property type="protein sequence ID" value="CTQ63965"/>
        <property type="gene ID" value="LAX5112_00130"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13673">
        <property type="entry name" value="Acetyltransf_10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="25"/>
            <end position="153"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ63965.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="155" mass="17281" checksum="37C32D90386E96B3" modified="2015-12-09" version="1">MPYTVERASSADSHEIALLLRASIIELCGLDHGDNPDRYKAWLKNKTAPNVESWIDGPGAAFVVQDQDKRILGFAMGTPKGHIPLMYVLPDARLTGVSKTLMRALEDTFRDRGLDEAHLSSTLTAERFYKSLGYAETGETKTQLDMTFRCFKKGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZMN1</accession>
    <name>A0A0M6ZMN1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">FeS cluster assembly protein SufB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">sufB</name>
        <name evidence="3" type="ORF">LAX5112_00151</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UPF0051 (ycf24) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64019.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670171.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00151"/>
    <dbReference type="EnsemblBacteria" id="CTQ64019">
        <property type="protein sequence ID" value="CTQ64019"/>
        <property type="gene ID" value="LAX5112_00151"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016226">
        <property type="term" value="P:iron-sulfur cluster assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010231">
        <property type="entry name" value="SUF_FeS_clus_asmbl_SufB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000825">
        <property type="entry name" value="SUF_FeS_clus_asmbl_SufBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037284">
        <property type="entry name" value="SUF_FeS_clus_asmbl_SufBD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045595">
        <property type="entry name" value="SufBD_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01458">
        <property type="entry name" value="SUFBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19295">
        <property type="entry name" value="SufBD_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101960">
        <property type="entry name" value="SSF101960"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01980">
        <property type="entry name" value="sufB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SufBD_N" evidence="2">
        <location>
            <begin position="154"/>
            <end position="211"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF19295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ64019.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="490" mass="54716" checksum="3DB2360E80B0371E" modified="2015-12-09" version="1">MPAVQETIDQVKAIDVDQYKYGFVTDIESEKGAKGLSEETVRFLSAKKDEPEWMTEWRLDALRRFQQMDEPDWARVSYPKIDFDALYYWAAPKSVEGPKSLDEVDPELLETYEKLGIPLREQEILAGVAPENRVAVDAVFDSVSVVTTFKEELKKAGVIFCSISEAMREYPELVKKYIGSVVPVTDNYYATLNSAVFSDGSFVYIPEGVRCPMELSTYFRINEQNTGQFERTLIIADKGSYVSYLEGCTAPQRDENQLHAAVVELIALDDAEIKYSTVQNWFPGDKDGKGGIYNFVTKRGDCRGKNSKISWTQVETGSAITWKYPSCILRGDNSRGEFYSIAVSNGHQQIDSGTKMIHLGKNTSSRVISKGISAGKSENTYRGLISAHRKASNARNFTQCDSLLIGQDCGAHTVPYIESKNATAQFEHEATTSKISDDQMFYCLQRGMNEEEAVALIVNGFVKDVIQQLPMEFAVEAQKLISISLEGSVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZN14</accession>
    <name>A0A0M6ZN14_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Bifunctional protein FolD</fullName>
        </recommendedName>
        <domain>
            <recommendedName>
                <fullName evidence="10">Methylenetetrahydrofolate dehydrogenase</fullName>
                <ecNumber evidence="10">1.5.1.5</ecNumber>
            </recommendedName>
        </domain>
        <domain>
            <recommendedName>
                <fullName evidence="10">Methenyltetrahydrofolate cyclohydrolase</fullName>
                <ecNumber evidence="10">3.5.4.9</ecNumber>
            </recommendedName>
        </domain>
    </protein>
    <gene>
        <name evidence="10 13" type="primary">folD</name>
        <name evidence="13" type="ORF">LAX5112_00006</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10-formyltetrahydrofolate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>(6R)-5,10-methylene-5,6,7,8-tetrahydrofolate + NADP(+) = 5,10-methenyltetrahydrofolate + NADPH</text>
            <dbReference type="Rhea" id="RHEA:22812"/>
            <dbReference type="ChEBI" id="CHEBI:15636"/>
            <dbReference type="ChEBI" id="CHEBI:57455"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="EC" id="1.5.1.5"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>5,10-methenyltetrahydrofolate + H2O = (6S)-10-formyltetrahydrofolate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:23700"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57454"/>
            <dbReference type="ChEBI" id="CHEBI:57455"/>
            <dbReference type="EC" id="3.5.4.9"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="10">One-carbon metabolism; tetrahydrofolate interconversion.</text>
    </comment>
    <comment type="subunit">
        <text evidence="10">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="10">Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="1.5.1.5" evidence="10"/>
    <dbReference type="EC" id="3.5.4.9" evidence="10"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63621.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670074.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00006"/>
    <dbReference type="EnsemblBacteria" id="CTQ63621">
        <property type="protein sequence ID" value="CTQ63621"/>
        <property type="gene ID" value="LAX5112_00006"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00193"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004477">
        <property type="term" value="F:methenyltetrahydrofolate cyclohydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004488">
        <property type="term" value="F:methylenetetrahydrofolate dehydrogenase (NADP+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000105">
        <property type="term" value="P:histidine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009086">
        <property type="term" value="P:methionine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006164">
        <property type="term" value="P:purine nucleotide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035999">
        <property type="term" value="P:tetrahydrofolate interconversion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd01080">
        <property type="entry name" value="NAD_bind_m-THF_DH_Cyclohyd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01576">
        <property type="entry name" value="THF_DHG_CYH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046346">
        <property type="entry name" value="Aminiacid_DH-like_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000672">
        <property type="entry name" value="THF_DH/CycHdrlase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020630">
        <property type="entry name" value="THF_DH/CycHdrlase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020867">
        <property type="entry name" value="THF_DH/CycHdrlase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020631">
        <property type="entry name" value="THF_DH/CycHdrlase_NAD-bd_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00763">
        <property type="entry name" value="THF_DHG_CYH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02882">
        <property type="entry name" value="THF_DHG_CYH_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00085">
        <property type="entry name" value="THFDHDRGNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53223">
        <property type="entry name" value="SSF53223"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00767">
        <property type="entry name" value="THF_DHG_CYH_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 10" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="7 10" id="KW-0368">Histidine biosynthesis</keyword>
    <keyword evidence="4 10" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="8 10" id="KW-0486">Methionine biosynthesis</keyword>
    <keyword evidence="9 10" id="KW-0511">Multifunctional enzyme</keyword>
    <keyword evidence="5 10" id="KW-0521">NADP</keyword>
    <keyword evidence="1 10" id="KW-0554">One-carbon metabolism</keyword>
    <keyword evidence="6 10" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3 10" id="KW-0658">Purine biosynthesis</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="THF_DHG_CYH" evidence="11">
        <location>
            <begin position="7"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="domain" description="THF_DHG_CYH_C" evidence="12">
        <location>
            <begin position="125"/>
            <end position="292"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <begin position="170"/>
            <end position="172"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="195"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="236"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022563"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023268"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01576"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF00763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF02882"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="CTQ63621.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="303" mass="31866" checksum="D9FD28B00B878AAD" modified="2015-12-09" version="1">MPQAQIIDGKAIAESVRGEITERAAKLLSETGKRPGLAVILVGEDPASQVYVRNKDRAAEACGFHSVKHTMPADSSEDAVLGMVDQLNNDPDIHGILVQLPLPGHIDESKVLRLIKPEKDVDGFHPINVGLLTAGERNSALVPCTPAGSLVLLKRTLGDTLSGKNAVVVGRSNIVGKPMASLLLQESCTVTIAHSRTKDLPDVVRAADIVVAAVGRPEMVKGDWIKPGATVIDVGINRIPAPEKGEGKSRLVGDVAFEEAAEHAGAITPVPGGVGPMTIAMLMVNTLTAARRLLGLPEDEPLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZNL1</accession>
    <name>A0A0M6ZNL1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">CASPASE_P20 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_00077</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63821.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00077"/>
    <dbReference type="EnsemblBacteria" id="CTQ63821">
        <property type="protein sequence ID" value="CTQ63821"/>
        <property type="gene ID" value="LAX5112_00077"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004197">
        <property type="term" value="F:cysteine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.101.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029030">
        <property type="entry name" value="Caspase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001309">
        <property type="entry name" value="Pept_C14_p20"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015917">
        <property type="entry name" value="Pept_C14A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002477">
        <property type="entry name" value="Peptidoglycan-bd-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036365">
        <property type="entry name" value="PGBD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036366">
        <property type="entry name" value="PGBDSf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01471">
        <property type="entry name" value="PG_binding_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00115">
        <property type="entry name" value="CASc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47090">
        <property type="entry name" value="SSF47090"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52129">
        <property type="entry name" value="SSF52129"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50208">
        <property type="entry name" value="CASPASE_P20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005808854" description="CASPASE_P20 domain-containing protein" evidence="2">
        <location>
            <begin position="22"/>
            <end position="520"/>
        </location>
    </feature>
    <feature type="domain" description="CASPASE_P20" evidence="3">
        <location>
            <begin position="21"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="339"/>
            <end position="378"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="465"/>
            <end position="497"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="467"/>
            <end position="497"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50208"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ63821.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="520" mass="55077" checksum="E47CEB0260BFF99C" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPJ1</accession>
    <name>A0A0M6ZPJ1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Parvulin-like PPIase</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Peptidyl-prolyl cis-trans isomerase plp</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">Rotamase plp</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="10" type="primary">ppiD</name>
        <name evidence="10" type="ORF">LAX5112_00200</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the PpiC/parvulin rotamase family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64162.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670201.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00200"/>
    <dbReference type="EnsemblBacteria" id="CTQ64162">
        <property type="protein sequence ID" value="CTQ64162"/>
        <property type="gene ID" value="LAX5112_00200"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003755">
        <property type="term" value="F:peptidyl-prolyl cis-trans isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007049">
        <property type="term" value="P:cell cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.50.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046357">
        <property type="entry name" value="PPIase_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000297">
        <property type="entry name" value="PPIase_PpiC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027304">
        <property type="entry name" value="Trigger_fact/SurA_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13145">
        <property type="entry name" value="Rotamase_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF109998">
        <property type="entry name" value="SSF109998"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50198">
        <property type="entry name" value="PPIC_PPIASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="3" id="KW-0132">Cell division</keyword>
    <keyword evidence="7 10" id="KW-0413">Isomerase</keyword>
    <keyword evidence="8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0697">Rotamase</keyword>
    <keyword evidence="8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="domain" description="PpiC" evidence="9">
        <location>
            <begin position="266"/>
            <end position="353"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007656"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00018370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00030642"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00031484"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00278"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50198"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ64162.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="639" mass="69003" checksum="55772CC68C7A424E" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="31" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPV6</accession>
    <name>A0A0M6ZPV6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 11">DNA-binding transcriptional regulator NtrC</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="11">Nitrogen regulation protein NR(I)</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11 14" type="primary">ntrC</name>
        <name evidence="14" type="ORF">LAX5112_00242</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11">Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 11">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64282.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008191129.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00242"/>
    <dbReference type="EnsemblBacteria" id="CTQ64282">
        <property type="protein sequence ID" value="CTQ64282"/>
        <property type="gene ID" value="LAX5112_00242"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000156">
        <property type="term" value="F:phosphorelay response regulator activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009399">
        <property type="term" value="P:nitrogen fixation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006808">
        <property type="term" value="P:regulation of nitrogen utilization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002197">
        <property type="entry name" value="HTH_Fis"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002078">
        <property type="entry name" value="Sigma_54_int"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025662">
        <property type="entry name" value="Sigma_54_int_dom_ATP-bd_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025943">
        <property type="entry name" value="Sigma_54_int_dom_ATP-bd_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025944">
        <property type="entry name" value="Sigma_54_int_dom_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010114">
        <property type="entry name" value="Transcript_reg_NtrC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02954">
        <property type="entry name" value="HTH_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00158">
        <property type="entry name" value="Sigma54_activat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01590">
        <property type="entry name" value="HTHFIS"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01818">
        <property type="entry name" value="ntrC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00675">
        <property type="entry name" value="SIGMA54_INTERACT_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00676">
        <property type="entry name" value="SIGMA54_INTERACT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00688">
        <property type="entry name" value="SIGMA54_INTERACT_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50045">
        <property type="entry name" value="SIGMA54_INTERACT_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8 11" id="KW-0010">Activator</keyword>
    <keyword evidence="4 11" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="11" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7 11" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="11" id="KW-0535">Nitrogen fixation</keyword>
    <keyword evidence="3 11" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="11" id="KW-0678">Repressor</keyword>
    <keyword evidence="9 11" id="KW-0804">Transcription</keyword>
    <keyword evidence="6 11" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="5 11" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="domain" description="Response regulatory" evidence="13">
        <location>
            <begin position="5"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="domain" description="Sigma-54 factor interaction" evidence="12">
        <location>
            <begin position="139"/>
            <end position="367"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="10">
        <location>
            <position position="54"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00019059"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023159"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU365013"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50045"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="CTQ64282.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="479" mass="53577" checksum="431DC481DE286B12" modified="2015-12-09" version="1">MPTGTILVADDDAAIRTVLNQALSRAGYTVRLTSNASTLWRWVSAGDGDLVITDVVMPDENIFDVLPRIKKMRPELPVLVMSAQNTFMTAIKASEKGAYEYLPKPFDLKELTGIVQRALEEPKKRPVADLEESGEGMPLVGRSPAMQEIYRVLARLMQTDLTVMINGESGTGKELVARALHDYGKRRNGPFVAINMAAIPRDLIEAELFGHEKGAFTGAQNRSSGRFEQADGGTLFLDEIGDMPMEAQTRLLRVLQQGEYTTVGGRTPIKTDVRIVAATNKDLRHLINQGLFREDLYFRLNVVPIRLPPLRERVEDIPDLVRHFFSIAEKEGLPAKQVDQSAMNLMRRYRWPGNVRELENLVRRLAALYPQDVIGEAMLDHELSQPSTNPLEDETSETVDLGGSVEKYLSGYFETFGDALPPPGLYHRILREVEYPLISAALAATRGNQIKAAELLGVNRNTLRKKIRDLDIQVMRSTR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQ04</accession>
    <name>A0A0M6ZQ04_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Putative membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_00297</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64437.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670274.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="ESTHER" id="9rhob-b9qsg7">
        <property type="family name" value="Abhydrolase_9"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ64437">
        <property type="protein sequence ID" value="CTQ64437"/>
        <property type="gene ID" value="LAX5112_00297"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027787">
        <property type="entry name" value="Alpha/beta-hydrolase_catalytic"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012037">
        <property type="entry name" value="Alpha/beta-hydrolase_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027788">
        <property type="entry name" value="Alpha/beta-hydrolase_N_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10081">
        <property type="entry name" value="Abhydrolase_9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF15420">
        <property type="entry name" value="Abhydrolase_9_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF007542">
        <property type="entry name" value="UCP007542"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="45"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="78"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="119"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="161"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="domain" description="Abhydrolase_9_N" evidence="3">
        <location>
            <begin position="32"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="domain" description="Abhydrolase_9" evidence="2">
        <location>
            <begin position="256"/>
            <end position="543"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF10081"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF15420"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ64437.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="554" mass="61164" checksum="68C763C3655F59EF" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQ39</accession>
    <name>A0A0M6ZQ39_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Purine efflux pump PbuE</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">pbuE</name>
        <name evidence="8" type="ORF">LAX5112_00266</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64351.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670248.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ64351">
        <property type="protein sequence ID" value="CTQ64351"/>
        <property type="gene ID" value="LAX5112_00266"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0732">Signal</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="6">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005808888" evidence="6">
        <location>
            <begin position="20"/>
            <end position="389"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="35"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="68"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="97"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="130"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="158"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="197"/>
            <end position="222"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="228"/>
            <end position="250"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="262"/>
            <end position="282"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="294"/>
            <end position="314"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="326"/>
            <end position="350"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="356"/>
            <end position="376"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="7">
        <location>
            <begin position="1"/>
            <end position="381"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ64351.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="389" mass="38695" checksum="B663D9D9ED70CE96" modified="2015-12-09" version="1">MMSLALLLCPFAFTMGAFAFSGALVPMAASLGVSVGEAAALQSGFAIACAFCGPVLAKLTSSLPRKPLLLTVLMLMTALNLLSAVVPGYGALMVSRVLVGGVGALAFPLATAIASAGATAESRPAAVAKVYAGIPLAMIIGIPIGSVLGHTIGWQACFAAMGVVSAMAFALVLVSVPSKLPMQKHTAGFRETVGVAIVAHLGIMLIASTALFTLVGLLGPIIRALTGFSGPGIAALQVIAGLSSLAGIRLGARYATVQNRSLLAVLFLVLAGSLAVVVPSLGLQQAGSIELGTILLSVVLGPVAQFAIGATVQARLAALAGSSATFVFALNASMVYLGQGLGIALGAAALDLSGIASAPALGTAIALFGCLFAVWLGHFAKNNFQTARG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQ69</accession>
    <name>A0A0M6ZQ69_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Glyco_hydro_114 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_00257</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64326.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ64326">
        <property type="protein sequence ID" value="CTQ64326"/>
        <property type="gene ID" value="LAX5112_00257"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004352">
        <property type="entry name" value="GH114_TIM-barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03537">
        <property type="entry name" value="Glyco_hydro_114"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005808891" description="Glyco_hydro_114 domain-containing protein" evidence="1">
        <location>
            <begin position="31"/>
            <end position="269"/>
        </location>
    </feature>
    <feature type="domain" description="Glyco_hydro_114" evidence="2">
        <location>
            <begin position="39"/>
            <end position="258"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF03537"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ64326.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="269" mass="28989" checksum="D3F47CF5FB68A087" modified="2015-12-09" version="1">MHIGKALRAAAIAMVCGFGICGGYSAPAFAAAKFHVGDRWDWQLKGPADLDRDVEMLTLDPRLVTADQLQGLHAQGVDTVCHVNAGTIAETNPGFSDLPPAVIGSPHKARPNERYLDIRRLQMVVPVITQQIVACKNQGFTAIEPDGFDAYAKDSGFPLTAADTVRYATTLAHVAHGLGLGIAQKNVPELTEALMPHFDFAITESCFETGTCEQIAAYPKANKPAFNAEYTDADIDFAKACAEGARLNINMIRKDRPVTAPVIFCQAEF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQX4</accession>
    <name>A0A0M6ZQX4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Lactoylglutathione lyase</fullName>
            <ecNumber evidence="2">4.4.1.5</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">gloA_1</name>
        <name evidence="2" type="ORF">LAX5112_00079</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="4.4.1.5" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63823.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670126.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00079"/>
    <dbReference type="EnsemblBacteria" id="CTQ63823">
        <property type="protein sequence ID" value="CTQ63823"/>
        <property type="gene ID" value="LAX5112_00079"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004462">
        <property type="term" value="F:lactoylglutathione lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.180.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029068">
        <property type="entry name" value="Glyas_Bleomycin-R_OHBP_Dase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004360">
        <property type="entry name" value="Glyas_Fos-R_dOase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018146">
        <property type="entry name" value="Glyoxalase_1_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037523">
        <property type="entry name" value="VOC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00903">
        <property type="entry name" value="Glyoxalase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54593">
        <property type="entry name" value="SSF54593"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00934">
        <property type="entry name" value="GLYOXALASE_I_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51819">
        <property type="entry name" value="VOC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="VOC" evidence="1">
        <location>
            <begin position="2"/>
            <end position="127"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51819"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ63823.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="146" mass="16821" checksum="0EAB02239E602C6E" modified="2015-12-09" version="1">MRYLHTMVRVSNLEDSLDFYCNKMGMTETRRYESEQGRFTLVFLASSDDVESAKENARPVLELTYNWDPEGYTGGRNFGHLAYEVDNIYEFCEALQSNGVTINRPPRDGRMAFVRSPDNISFELLQKGQALEIKEPWASMGNTGEW</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZR03</accession>
    <name>A0A0M6ZR03_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">dctB_2</name>
        <name evidence="10" type="ORF">LAX5112_00355</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64661.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670344.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00355"/>
    <dbReference type="EnsemblBacteria" id="CTQ64661">
        <property type="protein sequence ID" value="CTQ64661"/>
        <property type="gene ID" value="LAX5112_00355"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029151">
        <property type="entry name" value="Sensor-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017055">
        <property type="entry name" value="Sig_transdc_His_kinase_DctB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF036431">
        <property type="entry name" value="STHK_DctB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103190">
        <property type="entry name" value="SSF103190"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="8" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10" id="KW-0808">Transferase</keyword>
    <keyword evidence="5 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="282"/>
            <end position="302"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="9">
        <location>
            <begin position="364"/>
            <end position="577"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="7">
        <location>
            <begin position="307"/>
            <end position="341"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ64661.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="595" mass="65163" checksum="F8BF282D4BDCD357" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRF8</accession>
    <name>A0A0M6ZRF8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Elongation factor 4</fullName>
            <shortName evidence="7">EF-4</shortName>
            <ecNumber evidence="7">3.6.5.n1</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Ribosomal back-translocase LepA</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7 9" type="primary">lepA</name>
        <name evidence="9" type="ORF">LAX5112_00598</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>GTP + H2O = GDP + H(+) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:19669"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58189"/>
            <dbReference type="EC" id="3.6.5.n1"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cell membrane</location>
            <topology evidence="7">Peripheral membrane protein</topology>
            <orientation evidence="7">Cytoplasmic side</orientation>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 7">Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. LepA subfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.5.n1" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65355.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00598"/>
    <dbReference type="EnsemblBacteria" id="CTQ65355">
        <property type="protein sequence ID" value="CTQ65355"/>
        <property type="gene ID" value="LAX5112_00598"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043022">
        <property type="term" value="F:ribosome binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003746">
        <property type="term" value="F:translation elongation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045727">
        <property type="term" value="P:positive regulation of translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd03709">
        <property type="entry name" value="lepA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.2570">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00071">
        <property type="entry name" value="LepA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006297">
        <property type="entry name" value="EF-4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035647">
        <property type="entry name" value="EFG_III/V"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000640">
        <property type="entry name" value="EFG_V-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004161">
        <property type="entry name" value="EFTu-like_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031157">
        <property type="entry name" value="G_TR_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038363">
        <property type="entry name" value="LepA_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013842">
        <property type="entry name" value="LepA_CTD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035654">
        <property type="entry name" value="LepA_IV"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005225">
        <property type="entry name" value="Small_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000795">
        <property type="entry name" value="T_Tr_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43512">
        <property type="entry name" value="PTHR43512"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00679">
        <property type="entry name" value="EFG_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00009">
        <property type="entry name" value="GTP_EFTU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03144">
        <property type="entry name" value="GTP_EFTU_D2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06421">
        <property type="entry name" value="LepA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00315">
        <property type="entry name" value="ELONGATNFCT"/>
    </dbReference>
    <dbReference type="SMART" id="SM00838">
        <property type="entry name" value="EFG_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54980">
        <property type="entry name" value="SSF54980"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01393">
        <property type="entry name" value="lepA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00231">
        <property type="entry name" value="small_GTP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00301">
        <property type="entry name" value="G_TR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51722">
        <property type="entry name" value="G_TR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="9" id="KW-0251">Elongation factor</keyword>
    <keyword evidence="5 7" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="3 7 9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="2 7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4 7" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tr-type G" evidence="8">
        <location>
            <begin position="10"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="22"/>
            <end position="27"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="139"/>
            <end position="142"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005454"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00071"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ65355.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="604" mass="66733" checksum="1BCD322B08DBA8A9" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRL7</accession>
    <name>A0A0M6ZRL7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 5">Cyclic pyranopterin monophosphate synthase</fullName>
            <ecNumber evidence="3 5">4.6.1.17</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Molybdenum cofactor biosynthesis protein C</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5 7" type="primary">moaC</name>
        <name evidence="7" type="ORF">LAX5112_00197</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Catalyzes the conversion of (8S)-3',8-cyclo-7,8-dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 5">
            <text>(8S)-3',8-cyclo-7,8-dihydroguanosine 5'-triphosphate = cyclic pyranopterin phosphate + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:49580"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:59648"/>
            <dbReference type="ChEBI" id="CHEBI:131766"/>
            <dbReference type="EC" id="4.6.1.17"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 5">Cofactor biosynthesis; molybdopterin biosynthesis.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Homohexamer; trimer of dimers.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the MoaC family.</text>
    </comment>
    <dbReference type="EC" id="4.6.1.17" evidence="3 5"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64154.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00197"/>
    <dbReference type="EnsemblBacteria" id="CTQ64154">
        <property type="protein sequence ID" value="CTQ64154"/>
        <property type="gene ID" value="LAX5112_00197"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00344"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061799">
        <property type="term" value="F:cyclic pyranopterin monophosphate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006777">
        <property type="term" value="P:Mo-molybdopterin cofactor biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01420">
        <property type="entry name" value="MoaC_PE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.640">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01224_B">
        <property type="entry name" value="MoaC_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023045">
        <property type="entry name" value="Mo_CF_biosynth-C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036522">
        <property type="entry name" value="MoaC_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002820">
        <property type="entry name" value="Mopterin_CF_biosynth-C_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01967">
        <property type="entry name" value="MoaC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55040">
        <property type="entry name" value="SSF55040"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00581">
        <property type="entry name" value="moaC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0456">Lyase</keyword>
    <keyword evidence="4 5" id="KW-0501">Molybdenum cofactor biosynthesis</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MoaC" evidence="6">
        <location>
            <begin position="17"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="5">
        <location>
            <begin position="77"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="5">
        <location>
            <begin position="115"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="active site" evidence="5">
        <location>
            <position position="130"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001637"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005046"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012575"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023150"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01224"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF01967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ64154.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="168" mass="17642" checksum="BAF471DB3449489B" modified="2015-12-09" version="1">MVEPTLTHLDAAGAANMVDVSEKETTHRIAVARGHVIMRADTLELIRSGNAKKGDVIGTARIAGILAAKKTHELIPLCHPLMLSKVSVDIEPDDSLPGLVVTATTKVSGQTGVEMEALTACSLTCLTIYDMAKAVDRGMVIGDIRLVEKAGGKSGHWTLEQDGSEGGT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSD8</accession>
    <name>A0A0M6ZSD8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00519</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65126.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451445.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00519"/>
    <dbReference type="EnsemblBacteria" id="CTQ65126">
        <property type="protein sequence ID" value="CTQ65126"/>
        <property type="gene ID" value="LAX5112_00519"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="35"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="76"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="124"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="164"/>
            <end position="187"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65126.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="197" mass="22069" checksum="CFE3411CF90758A9" modified="2015-12-09" version="1">MISTNELRAAWEGSWLLLRSDPQGMSYFDLSLQGFWRSFQVIFLLAPVFLVSAMAEKKLLISENVIVAELFPADTYWFAQFMSLGIDWVTLPLILALIAGPIGISRQYVPFIVVRNWTSILASMPYLMIALLYLTGIIPSGIMVLLSFTCLIVVLWYRFLIARIALQASVSMAIGIVFLDILLSLVIGELTGRLWAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSY5</accession>
    <name>A0A0M6ZSY5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Cold shock protein CspC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">cspC</name>
        <name evidence="3" type="ORF">LAX5112_00590</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65331.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670518.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ65331">
        <property type="protein sequence ID" value="CTQ65331"/>
        <property type="gene ID" value="LAX5112_00590"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd04458">
        <property type="entry name" value="CSP_CDS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012156">
        <property type="entry name" value="Cold_shock_CspA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011129">
        <property type="entry name" value="CSD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002059">
        <property type="entry name" value="CSP_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00313">
        <property type="entry name" value="CSD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002599">
        <property type="entry name" value="Cold_shock_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00357">
        <property type="entry name" value="CSP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51857">
        <property type="entry name" value="CSD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CSD" evidence="2">
        <location>
            <begin position="1"/>
            <end position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ65331.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="66" mass="7441" checksum="173B9FC62B589760" modified="2015-12-09" version="1">MLHGNVKWFDKGRGVGTIEPEDGEDILVDIMALRRSGIDSLKEGQVVAFDLEWRRGQMVAEDLKVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTF6</accession>
    <name>A0A0M6ZTF6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">8-oxoguanine deaminase</fullName>
            <ecNumber evidence="2">3.5.4.32</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00853</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.5.4.32" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66055.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670755.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00853"/>
    <dbReference type="EnsemblBacteria" id="CTQ66055">
        <property type="protein sequence ID" value="CTQ66055"/>
        <property type="gene ID" value="LAX5112_00853"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102127">
        <property type="term" value="F:8-oxoguanine deaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006680">
        <property type="entry name" value="Amidohydro-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010252">
        <property type="entry name" value="HutF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011059">
        <property type="entry name" value="Metal-dep_hydrolase_composite"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032466">
        <property type="entry name" value="Metal_Hydrolase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43608">
        <property type="entry name" value="PTHR43608"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01979">
        <property type="entry name" value="Amidohydro_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51338">
        <property type="entry name" value="SSF51338"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51556">
        <property type="entry name" value="SSF51556"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02022">
        <property type="entry name" value="hutF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Amidohydro-rel" evidence="1">
        <location>
            <begin position="53"/>
            <end position="434"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01979"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66055.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="462" mass="50043" checksum="B27BF9E6C31E611B" modified="2015-12-09" version="1">MPTAQDSTIFADEALLPSGWAENVRVDFSANGEISAVETNAPSLAGEGHRVAILLPAPSNLHSHAFQRAMAGMSERRGQESRDSFWTWRQIMFRFLDTLTPDDVEAIATFVQMEMLEAGYAAVGEFHYLHHQPGGAPYGNLGEMSERIAAAASETGIGLTLLPVLYTYGGCDRRPLAPGQIRFGNDFEQFQKLHEQAGDTLRSLDNDSVLGVAPHSLRAVDSDALKNAIALAGQKPLHMHLAEQVAEVEEVLEATGKRPVGWLLDNHDVSKNWCLIHCTQMTPEETVGLARSGAVAGLCPITESSLGDGIFDGVRYLDTGGRFGVGSDSNIRISLSEELRTLEYSQRLRDKCRASVANPENSTGRVLFDGAVFGGAQACGRSAGQIAPGHLADMVALDANAIDLEDREGDEILDAYIFAGDDRMVQDVWCAGRHVVTGGIHVKGEKIQARYRATMKALRSRI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTI4</accession>
    <name>A0A0M6ZTI4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Non-canonical purine NTP pyrophosphatase</fullName>
            <ecNumber evidence="4">3.6.1.19</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_00415</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the HAM1 NTPase family.</text>
    </comment>
    <dbReference type="EC" id="3.6.1.19" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64824.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00415"/>
    <dbReference type="EnsemblBacteria" id="CTQ64824">
        <property type="protein sequence ID" value="CTQ64824"/>
        <property type="gene ID" value="LAX5112_00415"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047429">
        <property type="term" value="F:nucleoside-triphosphate diphosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009143">
        <property type="term" value="P:nucleoside triphosphate catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009117">
        <property type="term" value="P:nucleotide metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00515">
        <property type="entry name" value="HAM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.950.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002637">
        <property type="entry name" value="Ham1p-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029001">
        <property type="entry name" value="ITPase-like_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11067">
        <property type="entry name" value="PTHR11067"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01725">
        <property type="entry name" value="Ham1p_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52972">
        <property type="entry name" value="SSF52972"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0546">Nucleotide metabolism</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023080"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ64824.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="212" mass="22436" checksum="0F427DA89D880725" modified="2015-12-09" version="1">MHHDSPEFLRVSSPLVLASHNLNKIAAMKEALVGCPAELLSARQLNLQSPDETGNTVLENALIKARSVAQQSGHAAISDDSGFFISALDDLPGAAAVDWAGPDSDHTPALRRIGDMLSERGLTTSAARFVTVIAAALPDGTAIAEEGATHGHLVWPPRGKTDGYLSVFALSAGANSIAELMVGQDAGTTHDLPAYAHRRPTIDRLMQRIRFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTK0</accession>
    <name>A0A0M6ZTK0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Formate dehydrogenase iron-sulfur subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">fdhB1</name>
        <name evidence="6" type="ORF">LAX5112_00871</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66105.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040450988.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00871"/>
    <dbReference type="EnsemblBacteria" id="CTQ66105">
        <property type="protein sequence ID" value="CTQ66105"/>
        <property type="gene ID" value="LAX5112_00871"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017896">
        <property type="entry name" value="4Fe4S_Fe-S-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017900">
        <property type="entry name" value="4Fe4S_Fe_S_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000813">
        <property type="entry name" value="7Fe_ferredoxin"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13247">
        <property type="entry name" value="Fer4_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00354">
        <property type="entry name" value="7FE8SFRDOXIN"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00198">
        <property type="entry name" value="4FE4S_FER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51379">
        <property type="entry name" value="4FE4S_FER_2"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0408">Iron</keyword>
    <keyword evidence="4" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="5">
        <location>
            <begin position="9"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="5">
        <location>
            <begin position="50"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="5">
        <location>
            <begin position="83"/>
            <end position="112"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51379"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ66105.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="202" mass="21618" checksum="F271CAE709E309BD" modified="2015-12-09" version="1">MALGGQARAKFLCDAERCIECNACVTACKNEHEVPWGINRRRVVTINDGKPGERSISVACMHCSDAPCMAVCPVDCFYQNEEGVVLHSKDLCIGCGYCFYACPFGAPQFPQAGNFGSRGKMDKCTFCAGGPEENHSTAEFAKYGRNRIAEGKLPICAEMCSTKALLAGDGDVVANIYRERVVARGFGSGAWGWGSAYGQNGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZU25</accession>
    <name>A0A0M6ZU25_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="11 12">Na(+)-translocating NADH-quinone reductase subunit C</fullName>
            <shortName evidence="11 12">Na(+)-NQR subunit C</shortName>
            <shortName evidence="11 12">Na(+)-translocating NQR subunit C</shortName>
            <ecNumber evidence="11 12">7.2.1.1</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="11 12">NQR complex subunit C</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="11 12">NQR-1 subunit C</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11 14" type="primary">nqrC</name>
        <name evidence="14" type="ORF">LAX5112_00740</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11">NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="11 12">
            <text>a ubiquinone + H(+) + n Na(+)(in) + NADH = a ubiquinol + n Na(+)(out) + NAD(+)</text>
            <dbReference type="Rhea" id="RHEA:47748"/>
            <dbReference type="Rhea" id="RHEA-COMP:9565"/>
            <dbReference type="Rhea" id="RHEA-COMP:9566"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16389"/>
            <dbReference type="ChEBI" id="CHEBI:17976"/>
            <dbReference type="ChEBI" id="CHEBI:29101"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="EC" id="7.2.1.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="11 12">
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="11 12">Composed of six subunits; NqrA, NqrB, NqrC, NqrD, NqrE and NqrF.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="11">Cell membrane</location>
            <topology evidence="11">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="11 12">Belongs to the NqrC family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="7.2.1.1" evidence="11 12"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65742.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670669.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00740"/>
    <dbReference type="EnsemblBacteria" id="CTQ65742">
        <property type="protein sequence ID" value="CTQ65742"/>
        <property type="gene ID" value="LAX5112_00740"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010181">
        <property type="term" value="F:FMN binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016655">
        <property type="term" value="F:oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006814">
        <property type="term" value="P:sodium ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00427">
        <property type="entry name" value="NqrC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007329">
        <property type="entry name" value="FMN-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010204">
        <property type="entry name" value="NqrC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37838">
        <property type="entry name" value="PTHR37838"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04205">
        <property type="entry name" value="FMN_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF009437">
        <property type="entry name" value="NQR-1_subunit_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00900">
        <property type="entry name" value="FMN_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01938">
        <property type="entry name" value="nqrC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="1 11" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="11 12" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="11 12" id="KW-0288">FMN</keyword>
    <keyword evidence="8 11 12" id="KW-0406">Ion transport</keyword>
    <keyword evidence="9 11" id="KW-0472">Membrane</keyword>
    <keyword evidence="6 11 12" id="KW-0520">NAD</keyword>
    <keyword evidence="14" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="11" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 11 12" id="KW-0915">Sodium</keyword>
    <keyword evidence="10 11 12" id="KW-0739">Sodium transport</keyword>
    <keyword evidence="4 11" id="KW-1278">Translocase</keyword>
    <keyword evidence="3 11" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 11" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="11 12" id="KW-0813">Transport</keyword>
    <keyword evidence="11 12" id="KW-0830">Ubiquinone</keyword>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="26"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="domain" description="FMN_bind" evidence="13">
        <location>
            <begin position="156"/>
            <end position="254"/>
        </location>
    </feature>
    <feature type="modified residue" description="FMN phosphoryl threonine" evidence="11">
        <location>
            <position position="237"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022519"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023053"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023201"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00427"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRNR" id="PIRNR009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="SMART" id="SM00900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="CTQ65742.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="268" mass="29241" checksum="9A6700F949600D52" modified="2015-12-09" version="1">MPEDKDNKGFIRRFLDLPVDSVPKTIFVAVSICLVASMVVSAAAVSLRPLQEVNKLKDKQINILQVAGLYEPGSNVAEAFEVFEPQVLEIATGKFTDKFDPATFDDRAAADDPETSIALTDDPASIGRQSKYVTVYLLRNDDGSLDKVILPIHGYGLWSTLYGFIALEENGNDIFGLQFYSHGETPGLGAEVDNPRWKSQWNGKKLTDDSGDLLITVAKTVPPQGEEYHVDALAGATLTTVGVDNLVRFWMGEAGFAPFLENLKAGEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZU38</accession>
    <name>A0A0M6ZU38_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="11">K(+)/H(+) antiporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">kefC_1</name>
        <name evidence="11" type="ORF">LAX5112_00927</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66258.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670810.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ66258">
        <property type="protein sequence ID" value="CTQ66258"/>
        <property type="gene ID" value="LAX5112_00927"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015079">
        <property type="term" value="F:potassium ion transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015299">
        <property type="term" value="F:solute:proton antiporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1530.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006153">
        <property type="entry name" value="Cation/H_exchanger"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004771">
        <property type="entry name" value="K/H_exchanger"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006036">
        <property type="entry name" value="K_uptake_TrkA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038770">
        <property type="entry name" value="Na+/solute_symporter_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003148">
        <property type="entry name" value="RCK_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00999">
        <property type="entry name" value="Na_H_Exchanger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02254">
        <property type="entry name" value="TrkA_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00335">
        <property type="entry name" value="KUPTAKETRKA"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00932">
        <property type="entry name" value="2a37"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51201">
        <property type="entry name" value="RCK_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0406">Ion transport</keyword>
    <keyword evidence="7 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-0630">Potassium</keyword>
    <keyword evidence="2" id="KW-0633">Potassium transport</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="29"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="53"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="84"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="113"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="145"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="188"/>
            <end position="210"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="231"/>
            <end position="264"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="284"/>
            <end position="303"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="310"/>
            <end position="333"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="339"/>
            <end position="360"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="372"/>
            <end position="391"/>
        </location>
    </feature>
    <feature type="domain" description="RCK N-terminal" evidence="10">
        <location>
            <begin position="415"/>
            <end position="536"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="602"/>
            <end position="626"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="602"/>
            <end position="617"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005551"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022538"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022958"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51201"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ66258.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="626" mass="67372" checksum="29EA9E0471245562" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUZ0</accession>
    <name>A0A0M6ZUZ0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Chitooligosaccharide deacetylase</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Nodulation protein B</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">LAX5112_01008</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Is involved in generating a small heat-stable compound (Nod), an acylated oligomer of N-acetylglucosamine, that stimulates mitosis in various plant protoplasts.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the polysaccharide deacetylase family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66548.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670909.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01008"/>
    <dbReference type="EnsemblBacteria" id="CTQ66548">
        <property type="protein sequence ID" value="CTQ66548"/>
        <property type="gene ID" value="LAX5112_01008"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016810">
        <property type="term" value="F:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011330">
        <property type="entry name" value="Glyco_hydro/deAcase_b/a-brl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002509">
        <property type="entry name" value="NODB_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01522">
        <property type="entry name" value="Polysacc_deac_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88713">
        <property type="entry name" value="SSF88713"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51677">
        <property type="entry name" value="NODB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0536">Nodulation</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NodB homology" evidence="7">
        <location>
            <begin position="93"/>
            <end position="357"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003236"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010973"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00020071"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022458"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00032976"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51677"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ66548.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="357" mass="39500" checksum="36AEB19FC17BA89F" modified="2015-12-09" version="1">MSIRQTAITNAFRVLQTTGLSQLFAPFTQGCGAVFMLHRVRPARAGGFQPNRHLEITPEFLRATVGRIRANGYKIIALDEAVDLLKSGYGRERYAVLTFDDGYRDNLEYALPVLKELGAPFTVFVASGLVDRSSELWWQALELIIAENDQIVFSSDADEPTVCETVDEKCFCFNRLVAHLKNDVSEGDQRAIIRALSSQYGLDLAELADQEMMSWDEVRELASDPLVTIGAHTHDHFALARLTEDAARQDIEKGLERLEAELGQRSKHFAYPYGKHNAVDAGAAEVVGKFGFASAVTTFPGVLQSASARDLMLLPRVSLNGVYQDPAFVDQYLTGAPFALYRAAKWLTSGFGLRART</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZV83</accession>
    <name>A0A0M6ZV83_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_00881</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66132.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670774.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00881"/>
    <dbReference type="EnsemblBacteria" id="CTQ66132">
        <property type="protein sequence ID" value="CTQ66132"/>
        <property type="gene ID" value="LAX5112_00881"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.930.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045864">
        <property type="entry name" value="aa-tRNA-synth_II/BPL/LPL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004143">
        <property type="entry name" value="BPL_LPL_catalytic"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028044">
        <property type="entry name" value="DUF4444"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16917">
        <property type="entry name" value="BPL_LplA_LipB_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14563">
        <property type="entry name" value="DUF4444"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55681">
        <property type="entry name" value="SSF55681"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="BPL/LPL catalytic" evidence="2">
        <location>
            <begin position="6"/>
            <end position="186"/>
        </location>
    </feature>
    <feature type="domain" description="DUF4444" evidence="1">
        <location>
            <begin position="192"/>
            <end position="232"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF14563"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF16917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ66132.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="235" mass="25360" checksum="948C188A6C1DD35A" modified="2015-12-09" version="1">MNNLQFPPLFQGEAVTGTADPFDRAVALAVAGTDPGTVVYNLGGSTLRASLIFAPEVPLEEAMSMLPVCGLGFQAALGALAPPEVAVHLDWAGGIRVNGATCGRFRARASGANPNETPDWLIIGLELNVQTLEGNPGNDPDRTSLIEEGCGEVEPERLLESWVRHTLYWINRWQEDGPRPVHAEWRGLAKNLGEDITFNGETGTFVGVDEFFGMLMRMDGETKLIPLSTQLEGSQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVM0</accession>
    <name>A0A0M6ZVM0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Formate dehydrogenase region TAT target</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00873</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66110.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670766.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00873"/>
    <dbReference type="EnsemblBacteria" id="CTQ66110">
        <property type="protein sequence ID" value="CTQ66110"/>
        <property type="gene ID" value="LAX5112_00873"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014177">
        <property type="entry name" value="Formate_DH_TAT-contain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006311">
        <property type="entry name" value="TAT_signal"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF036704">
        <property type="entry name" value="UCP036704"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ66110.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="66" mass="6967" checksum="E7598047303DCE13" modified="2015-12-09" version="1">MKRPEQSGEGLEAGRRDFLKLAALSAPAAAAVVATGTAAQAAEPDLASEKMQDTVHTRAYYDSARF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVR9</accession>
    <name>A0A0M6ZVR9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01127</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66879.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670983.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ66879">
        <property type="protein sequence ID" value="CTQ66879"/>
        <property type="gene ID" value="LAX5112_01127"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ66879.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="358" mass="38513" checksum="F8F5B29CF8D5391C" modified="2015-12-09" version="1">MSSAYDTQINSLTAALSDLNTSLDSVTDSEALVEDDTGTHYQTTYTYFYVPSTPGAANTSADDTGLGTLLRLGEYADVEQTAYNAGADTYSAFFPAQHIADETGDAIYTNAAGGGKGILMACDGRILIRGGEKFYLNPKGAMHIQSDEGAITIQSGTDTNGNEQDINLIAGANGLGDLNTTVKKDTKTVAGEQYEKVTSVSRKYYEANKYEIYHANSYKEVHAHTDTRHYGTYFKMFLGGNIQVKIAAEFIFNLAFSLNIEPISKITFYAFKTDIGLVKTDILAWKTEIKEGELKVLGATFRSKAVKVDTTATEATATPVKASTGGITAEQIAAECANVNVKSMISLWEAKIASTAQI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZW21</accession>
    <name>A0A0M6ZW21_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01152</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66948.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671003.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01152"/>
    <dbReference type="EnsemblBacteria" id="CTQ66948">
        <property type="protein sequence ID" value="CTQ66948"/>
        <property type="gene ID" value="LAX5112_01152"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ66948.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="181" mass="19619" checksum="749C816CFF88B883" modified="2015-12-09" version="1">MTVTFGHAELTNGPSATTLHITLAAEPLELSWQHCGTTSDFLGDYFAKCCAKGVDQVDARHSIGYLLNEILENAVKFRHDGNIEISCSLDGNHFESEISNVIDPATAEKFQELLREILARDPGELLLERIEANATDLDSSGSGLGLLTLMSDYDAKLGWRFTPDASNGSVNLKTVAALTFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZW26</accession>
    <name>A0A0M6ZW26_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01159</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66965.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671008.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01159"/>
    <dbReference type="EnsemblBacteria" id="CTQ66965">
        <property type="protein sequence ID" value="CTQ66965"/>
        <property type="gene ID" value="LAX5112_01159"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021457">
        <property type="entry name" value="DUF3108"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11306">
        <property type="entry name" value="DUF3108"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809009" evidence="1">
        <location>
            <begin position="20"/>
            <end position="258"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66965.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="258" mass="27897" checksum="4C28DF69B911CC31" modified="2015-12-09" version="1">MHLKSLAAAFCLVAMPVEASSLYVKYDISLTGLKIGEGALSVDLQDQSYKIHGQGKMAAFGNFVSDGSGNVLATGSVSPQGLSPASFSMQAEEDGKPNTVSLSMANGAVTGTKIHPAQDRMNERIKVTDAHKRGVIDPLTAVLFPAPKGLRPDSCKRTIPIYDGRDRYDLVLDYKTKYQKRGGGKGYSGGVLTCSARYKAIAGHRPNRRTIKQLEANTSMEIHLAEVPGKPYLLLYRASLMTPVGPLNIQNVRFKKLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZY74</accession>
    <name>A0A0M6ZY74_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DUF1254 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01504</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67748.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671312.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01504"/>
    <dbReference type="EnsemblBacteria" id="CTQ67748">
        <property type="protein sequence ID" value="CTQ67748"/>
        <property type="gene ID" value="LAX5112_01504"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010679">
        <property type="entry name" value="DUF1254"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014456">
        <property type="entry name" value="UCP010244_IM"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06863">
        <property type="entry name" value="DUF1254"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF010244">
        <property type="entry name" value="UCP010244_imp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="domain" description="DUF1254" evidence="2">
        <location>
            <begin position="76"/>
            <end position="175"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF06863"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ67748.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="186" mass="20005" checksum="D3789F1A2AEF434A" modified="2015-12-09" version="1">MTLSPRFTLTAGALAVLCLAAIIHILVVLTIPQNVQHSAYDDALTYGPDRQFNLLPDVRPGEEALPGLDPAMKHAICRFQLSAGPVFFDAGIPASFWSIGVFNQAGETVYSLNNRTAGADRLSMLLITSEQLSILRQNPPANLEDLIVIETETISGIALLRSYVSHPTQAETIENAMSIASCDVLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZ36</accession>
    <name>A0A0M6ZZ36_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01631</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68088.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008190160.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ68088">
        <property type="protein sequence ID" value="CTQ68088"/>
        <property type="gene ID" value="LAX5112_01631"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025227">
        <property type="entry name" value="DUF4169"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13770">
        <property type="entry name" value="DUF4169"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="18"/>
            <end position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68088.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="68" mass="7951" checksum="AFE14443069609A6" modified="2015-12-09" version="1">MSAEIVNLRQARKHKQRQTREKTAESNRQKFGRTKAEREADRRRRDMHEKQVDGHKLDGPATTPPGDN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZE0</accession>
    <name>A0A0M6ZZE0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Cytochrome c domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_01485</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67697.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01485"/>
    <dbReference type="EnsemblBacteria" id="CTQ67697">
        <property type="protein sequence ID" value="CTQ67697"/>
        <property type="gene ID" value="LAX5112_01485"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.760.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009056">
        <property type="entry name" value="Cyt_c-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036909">
        <property type="entry name" value="Cyt_c-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00034">
        <property type="entry name" value="Cytochrom_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46626">
        <property type="entry name" value="SSF46626"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51007">
        <property type="entry name" value="CYTC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 4" id="KW-0349">Heme</keyword>
    <keyword evidence="3 4" id="KW-0408">Iron</keyword>
    <keyword evidence="2 4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="5">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809364" description="Cytochrome c domain-containing protein" evidence="5">
        <location>
            <begin position="23"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="domain" description="Cytochrome c" evidence="6">
        <location>
            <begin position="32"/>
            <end position="113"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00433"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ67697.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="115" mass="12145" checksum="6D692FDD75C50A95" modified="2015-12-09" version="1">MRTNALFWTGLFACILSGPALAASGTYPTDPASLASGREIAEIHCAACHAVAADDESAQEGAPRFRDLSSLYPLESLEESLAEGIVTAHENMPEIAFEPGDIDAFLGYLTSIQAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A014</accession>
    <name>A0A0M7A014_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Hemin-binding lipoprotein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">hbpA_1</name>
        <name evidence="6" type="ORF">LAX5112_01530</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the bacterial solute-binding protein 5 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67816.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671331.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01530"/>
    <dbReference type="EnsemblBacteria" id="CTQ67816">
        <property type="protein sequence ID" value="CTQ67816"/>
        <property type="gene ID" value="LAX5112_01530"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030288">
        <property type="term" value="C:outer membrane-bounded periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030678">
        <property type="entry name" value="Peptide/Ni-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039424">
        <property type="entry name" value="SBP_5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000914">
        <property type="entry name" value="SBP_5_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30290">
        <property type="entry name" value="PTHR30290"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00496">
        <property type="entry name" value="SBP_bac_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002741">
        <property type="entry name" value="MppA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="3" id="KW-0574">Periplasm</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809160" evidence="4">
        <location>
            <begin position="31"/>
            <end position="530"/>
        </location>
    </feature>
    <feature type="domain" description="SBP_bac_5" evidence="5">
        <location>
            <begin position="74"/>
            <end position="445"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ67816.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="530" mass="58764" checksum="D3E90C364BED38FB" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A099</accession>
    <name>A0A0M7A099_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DUF2147 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01287</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67243.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671117.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67243">
        <property type="protein sequence ID" value="CTQ67243"/>
        <property type="gene ID" value="LAX5112_01287"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019223">
        <property type="entry name" value="DUF2147"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09917">
        <property type="entry name" value="DUF2147"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809163" description="DUF2147 domain-containing protein" evidence="1">
        <location>
            <begin position="26"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="domain" description="DUF2147" evidence="2">
        <location>
            <begin position="30"/>
            <end position="138"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF09917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ67243.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="140" mass="14840" checksum="1D69C5CD214CAF63" modified="2015-12-09" version="1">MLKFNAAAALLAAGLLAATTAPSSAADAKGDWERPNGASKIRISSCGGALCGKLIWLRDPRNDTQNPDASKRSRPLLGVQIVQSMKPTGTDGQWKGKVYNAEDGKTYTGFIKLTSANKLKLEGCVMGGLICKGETWSRVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0J3</accession>
    <name>A0A0M7A0J3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Putative assembly protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">LAX5112_01632</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68091.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671402.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01632"/>
    <dbReference type="EnsemblBacteria" id="CTQ68091">
        <property type="protein sequence ID" value="CTQ68091"/>
        <property type="gene ID" value="LAX5112_01632"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007844">
        <property type="entry name" value="AsmA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032712">
        <property type="entry name" value="AsmA_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017023">
        <property type="entry name" value="UCP034039"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05170">
        <property type="entry name" value="AsmA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13502">
        <property type="entry name" value="AsmA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF034039">
        <property type="entry name" value="UCP034039"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AsmA" evidence="3">
        <location>
            <begin position="2"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="domain" description="AsmA_2" evidence="4">
        <location>
            <begin position="881"/>
            <end position="1081"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1205"/>
            <end position="1262"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="1112"/>
            <end position="1194"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF05170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF13502"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ68091.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="1276" mass="135769" checksum="8EA3A6462A0ACD85" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0N0</accession>
    <name>A0A0M7A0N0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Zn(II)-responsive regulator of zntA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">zntR_1</name>
        <name evidence="2" type="ORF">LAX5112_01802</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68598.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671524.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ68598">
        <property type="protein sequence ID" value="CTQ68598"/>
        <property type="gene ID" value="LAX5112_01802"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009061">
        <property type="entry name" value="DNA-bd_dom_put_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000551">
        <property type="entry name" value="MerR-type_HTH_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13411">
        <property type="entry name" value="MerR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00422">
        <property type="entry name" value="HTH_MERR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46955">
        <property type="entry name" value="SSF46955"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50937">
        <property type="entry name" value="HTH_MERR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH merR-type" evidence="1">
        <location>
            <begin position="4"/>
            <end position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50937"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68598.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="132" mass="15272" checksum="5AD3A9A91BDB87A9" modified="2015-12-09" version="1">MQRYFTITQLTQEFDITTRTLRFYEAQGLVTPQRRGRQRLYTPGDRTRIKLILRGKRLGFSLAEVKELIGMYGSAPGEAGQLRLLMEKIAARREELLEKQRDIELTLLELEEVEAGALGRMEELSPVTSEER</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1N2</accession>
    <name>A0A0M7A1N2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 9">4-diphosphocytidyl-2-C-methyl-D-erythritol kinase</fullName>
            <shortName evidence="9">CMK</shortName>
            <ecNumber evidence="2 9">2.7.1.148</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8 9">4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9 11" type="primary">ispE</name>
        <name evidence="11" type="ORF">LAX5112_01480</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>4-CDP-2-C-methyl-D-erythritol + ATP = 4-CDP-2-C-methyl-D-erythritol 2-phosphate + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:18437"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:57823"/>
            <dbReference type="ChEBI" id="CHEBI:57919"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.1.148"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="9">Isoprenoid biosynthesis; isopentenyl diphosphate biosynthesis via DXP pathway; isopentenyl diphosphate from 1-deoxy-D-xylulose 5-phosphate: step 3/6.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 9">Belongs to the GHMP kinase family. IspE subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.148" evidence="2 9"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67684.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671293.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01480"/>
    <dbReference type="EnsemblBacteria" id="CTQ67684">
        <property type="protein sequence ID" value="CTQ67684"/>
        <property type="gene ID" value="LAX5112_01480"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00056">
        <property type="reaction ID" value="UER00094"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050515">
        <property type="term" value="F:4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019288">
        <property type="term" value="P:isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016114">
        <property type="term" value="P:terpenoid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.890">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00061">
        <property type="entry name" value="IspE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036554">
        <property type="entry name" value="GHMP_kinase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006204">
        <property type="entry name" value="GHMP_kinase_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004424">
        <property type="entry name" value="IspE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014721">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold_subgr"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43527:SF2">
        <property type="entry name" value="PTHR43527:SF2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00288">
        <property type="entry name" value="GHMP_kinases_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF010376">
        <property type="entry name" value="IspE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="SSF54211"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55060">
        <property type="entry name" value="SSF55060"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00154">
        <property type="entry name" value="ispE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7 9" id="KW-0414">Isoprene biosynthesis</keyword>
    <keyword evidence="5 9 11" id="KW-0418">Kinase</keyword>
    <keyword evidence="4 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9 11" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="GHMP_kinases_N" evidence="10">
        <location>
            <begin position="96"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="active site" evidence="9">
        <location>
            <position position="17"/>
        </location>
    </feature>
    <feature type="active site" evidence="9">
        <location>
            <position position="146"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="104"/>
            <end position="114"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009684"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00017473"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00032554"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00061"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF00288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ67684.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="293" mass="31240" checksum="E4A5B21CFBAD72EF" modified="2015-12-09" version="1">MPDYQQTAVRAELARAKVNLALHITGQRNDGYHLLESLVAFPQIGDRIALEPSEKLELDIDGPFARELDLAGDNNLVLRAVRGFAERAKIDVPSVKITLTKRLPVASGIGGGSSDAATTLRLLEDVTGVYLSDADLHELAASLGADVPVCLTPEPQVMRGIGEDLAAAPLLPACGIVLVNPKVTLETPDVFRALDKKNNPQLAKMPDAFDDIAALIAYLTSSRNDLQTPAMSACGAIGEVLNFLQGDSRILFSRMSGSGATCFGLCAPTEMRAIETDLRTAHPDWWIASGPLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2L3</accession>
    <name>A0A0M7A2L3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01908</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68847.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671601.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ68847">
        <property type="protein sequence ID" value="CTQ68847"/>
        <property type="gene ID" value="LAX5112_01908"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ68847.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="106" mass="11575" checksum="3203AA244371E015" modified="2015-12-09" version="1">MTTPCLELVVFKVKDRARARIARRAAQDVVRNYEGFLSWSAYEACDDAGLFADVVMWRDLATAKAAGQKVISDPGFKAIMAEIDGLVSMAHYTADRMVEAETSAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2N6</accession>
    <name>A0A0M7A2N6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02068</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69315.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008188924.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02068"/>
    <dbReference type="EnsemblBacteria" id="CTQ69315">
        <property type="protein sequence ID" value="CTQ69315"/>
        <property type="gene ID" value="LAX5112_02068"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="36"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="77"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="104"/>
            <end position="125"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69315.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="140" mass="15099" checksum="A269FBFE3CF584F1" modified="2015-12-09" version="1">MRLLSALPFTLFALLIYNGFAFTAGAADPNFWSTPILSIAMVSGADFQLLASDLLITAGLFFLFIEILKATRIGKAAVVDHMLSVLVFVAFLVEFLIIPQAATSVFFILMVIALIDVIAGFSISITGARRDVAFGHGEMH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2S6</accession>
    <name>A0A0M7A2S6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01611</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68033.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ68033">
        <property type="protein sequence ID" value="CTQ68033"/>
        <property type="gene ID" value="LAX5112_01611"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022060">
        <property type="entry name" value="DUF3616"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12275">
        <property type="entry name" value="DUF3616"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809066" evidence="1">
        <location>
            <begin position="29"/>
            <end position="338"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68033.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="338" mass="36104" checksum="8643015FF2729C27" modified="2015-12-09" version="1">MIRKTATLMCALVGALAVLSALQGFASADEPGFVAEWSVKPEFDGKKKLRKSISGAACAPVSPPVCAVALDEKQRTQFFTIDGDRIVPGKSMRLLPKELDGAKTGEIDAEGAAYGDGFFYIVGSHGLSRKKAEFNQSSFFLFRFPVDGETGHPEFEFSKKKFAPEIERTDALRGILKGAPDPIGQYAEKPLGEGSGGVNIEGLAYRDGRLYIGLRGPSVGGLSFLRSVNVDALFFNSKPDLDVIELALGSGNGVRDLAAVSDGLIVLSGPVQSKGTYALHHLSLPSLTLSKLADLKMPDKDYKAETVLVLAEGAETVKILIMYDGAKDGGPREYLLTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2Y2</accession>
    <name>A0A0M7A2Y2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Inner membrane protein YdcO</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ydcO</name>
        <name evidence="2" type="ORF">LAX5112_01952</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68967.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671635.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ68967">
        <property type="protein sequence ID" value="CTQ68967"/>
        <property type="gene ID" value="LAX5112_01952"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042925">
        <property type="term" value="F:benzoate transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004711">
        <property type="entry name" value="Benzoate_Transporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30199">
        <property type="entry name" value="PTHR30199"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03594">
        <property type="entry name" value="BenE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00843">
        <property type="entry name" value="benE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="43"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="93"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="118"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="148"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="173"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="247"/>
            <end position="269"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="289"/>
            <end position="312"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="319"/>
            <end position="338"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="350"/>
            <end position="383"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68967.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="389" mass="39421" checksum="E5C67443CB2C6A00" modified="2015-12-09" version="1">MPAARPSFQSFSAGLLAAIVGFASSFAIVIQGLNATGATPAEATSGLMALSISMGLCAVVASLWTKIPVSIAWSTPGAALLASAGAVDGGFAAAVGAFVVCAVLIILAGLIRPFGRAVAAIPSPLANAMLAGVLFGLCLAPVRAVGEMPVYALAVILTWAVAVRFARLYAVPLAMVVTFGIAFLTGGSLSLAETPLISKPIVILPVFTFEAFVSIALPLFIVTMASQNIPGIAVLRAFGYQPNSSSLFTLSGVFSLLSAPFGGHAVNLAAITAAMCAGEDAHKDPAARYWAAVFAGVIYVLFGLFAGLVMAFVAATPGILIEAVAGLALLGALAFSIGEATKEAETRDSAIITFAITASGVSFFGVSGAFWGLLAGGAFMALMWFRKQT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A428</accession>
    <name>A0A0M7A428_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Auxin efflux carrier</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02011</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69176.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ69176">
        <property type="protein sequence ID" value="CTQ69176"/>
        <property type="gene ID" value="LAX5112_02011"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="61"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="95"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="123"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="158"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="182"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="215"/>
            <end position="238"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="244"/>
            <end position="261"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="273"/>
            <end position="295"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69176.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="296" mass="30993" checksum="F31157EB7F3023AD" modified="2015-12-09" version="1">MDVIFGHVVNVMLPVLLCVLLGYGLAALKAPFDRKMFGGLVANVGYPALILSHLAKDHIELGAFLNVLLAAACMILIFGVLGFGVLKLMRLPVQAYLSPMMLSNVGNIGLPVTTLAFGAEGAAVALGFVVVVLAAIFTIGVALPIGKPDFKTLAKQPVIYAVMVALVLMETGWSLPGPVDQSLSILAGLAVPIMLLTLGHSLATLKFGNLGRAATLSVIHICFSVIAALALTSVFPFSAAQQNAIILLCFMPPSVATYLAVSQHRPDDAPAVAGFIFLSTLMTLLTLPLVLTYWAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="32" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A467</accession>
    <name>A0A0M7A467_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Deoxyuridine 5'-triphosphate nucleotidohydrolase</fullName>
            <shortName evidence="4">dUTPase</shortName>
            <ecNumber evidence="4">3.6.1.23</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">dUTP pyrophosphatase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="4 6" type="primary">dut</name>
        <name evidence="6" type="ORF">LAX5112_02093</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 4">
            <text>dUTP + H2O = diphosphate + dUMP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:10248"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:61555"/>
            <dbReference type="ChEBI" id="CHEBI:246422"/>
            <dbReference type="EC" id="3.6.1.23"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="4">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="4">Pyrimidine metabolism; dUMP biosynthesis; dUMP from dCTP (dUTP route): step 2/2.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the dUTPase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="3.6.1.23" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69381.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008193513.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02093"/>
    <dbReference type="EnsemblBacteria" id="CTQ69381">
        <property type="protein sequence ID" value="CTQ69381"/>
        <property type="gene ID" value="LAX5112_02093"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00610">
        <property type="reaction ID" value="UER00666"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004170">
        <property type="term" value="F:dUTP diphosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006226">
        <property type="term" value="P:dUMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046081">
        <property type="term" value="P:dUTP catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07557">
        <property type="entry name" value="trimeric_dUTPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.70.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00116">
        <property type="entry name" value="dUTPase_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008181">
        <property type="entry name" value="dUTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029054">
        <property type="entry name" value="dUTPase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036157">
        <property type="entry name" value="dUTPase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033704">
        <property type="entry name" value="dUTPase_trimeric"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11241">
        <property type="entry name" value="PTHR11241"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00692">
        <property type="entry name" value="dUTPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51283">
        <property type="entry name" value="SSF51283"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00576">
        <property type="entry name" value="dut"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 4 6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0460">Magnesium</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3 4" id="KW-0546">Nucleotide metabolism</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="dUTPase" evidence="5">
        <location>
            <begin position="17"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="4">
        <location>
            <begin position="68"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="4">
        <location>
            <begin position="85"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="81"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000878"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023080"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00116"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ69381.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="149" mass="15680" checksum="3A78FCF77C98545E" modified="2015-12-09" version="1">MTIKLELKRLDNGRDLPLPAYQSDLAAGLDLLAAVDDGLTLQPGSRALVPTGLAMALPAGYEAQVRPRSGLAAKHGVTVLNTPGTIDADYRGEVKVILINLGDTAFEISRGDRIAQMVIAPVLQAEIEEVEILSETSRGTGGFGSTGQR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A491</accession>
    <name>A0A0M7A491_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Inner membrane-spanning protein YciB</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1 2" type="primary">yciB</name>
        <name evidence="2" type="ORF">LAX5112_02067</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Plays a role in cell envelope biogenesis, maintenance of cell envelope integrity and membrane homeostasis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the YciB family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69312.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008194357.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02067"/>
    <dbReference type="EnsemblBacteria" id="CTQ69312">
        <property type="protein sequence ID" value="CTQ69312"/>
        <property type="gene ID" value="LAX5112_02067"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00189">
        <property type="entry name" value="YciB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006008">
        <property type="entry name" value="YciB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36917">
        <property type="entry name" value="PTHR36917"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04279">
        <property type="entry name" value="IspA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00997">
        <property type="entry name" value="ispZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="1" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="15"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="55"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="82"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="113"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="153"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="177"/>
            <end position="195"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00189"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69312.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="213" mass="23815" checksum="BC4B5472B8CE63CA" modified="2015-12-09" version="1">MELERAPNDPSRKELSPLLKLALELGPLGVFFLFNSRGEQIAESFPVLKAVGEPIFLATAAFMVAITISLVASLYLTKRLPIMPLVSGVVVIVFGALTLWLHDELFIKLKPTIVNSLFGAILLGGLFFGKALLGYVFDSAFKLTDEGWRKLTFRWGVFFFVLAAINEIVWRSFSTDFWVSFKVFGVMPITLIFTLTQLPLIQKHAIVEDEEEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4L5</accession>
    <name>A0A0M7A4L5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="13">Hemolysin C</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">tlyC_1</name>
        <name evidence="13" type="ORF">LAX5112_02266</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the UPF0053 family. Hemolysin C subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69819.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008189135.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02266"/>
    <dbReference type="EnsemblBacteria" id="CTQ69819">
        <property type="protein sequence ID" value="CTQ69819"/>
        <property type="gene ID" value="LAX5112_02266"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd04590">
        <property type="entry name" value="CBS_pair_CorC_HlyC_assoc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.580.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.465.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000644">
        <property type="entry name" value="CBS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046342">
        <property type="entry name" value="CBS_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002550">
        <property type="entry name" value="CNNM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036318">
        <property type="entry name" value="FAD-bd_PCMH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016169">
        <property type="entry name" value="FAD-bd_PCMH_sub2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044751">
        <property type="entry name" value="Ion_transp-like_CBS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005170">
        <property type="entry name" value="Transptr-assoc_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00571">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03471">
        <property type="entry name" value="CorC_HlyC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01595">
        <property type="entry name" value="DUF21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00116">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM01091">
        <property type="entry name" value="CorC_HlyC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54631">
        <property type="entry name" value="SSF54631"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56176">
        <property type="entry name" value="SSF56176"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51371">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51846">
        <property type="entry name" value="CNNM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 8" id="KW-0129">CBS domain</keyword>
    <keyword evidence="7 9 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0677">Repeat</keyword>
    <keyword evidence="3 9 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 9 10" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="6"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="62"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="94"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="124"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="domain" description="CNNM transmembrane" evidence="12">
        <location>
            <begin position="2"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="domain" description="CBS" evidence="11">
        <location>
            <begin position="210"/>
            <end position="270"/>
        </location>
    </feature>
    <feature type="domain" description="CBS" evidence="11">
        <location>
            <begin position="278"/>
            <end position="335"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006446"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023122"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00703"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS51371"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS51846"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="CTQ69819.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="430" mass="46948" checksum="ACEBA22BE9049372" modified="2015-12-09" version="1">MTETALWLSIAAIFFLLFLSGFFSGSETALTAASRARVHQLEKTGDWRARVAGRLIASRERLIGALLLGNNLVNILASALATTVFLALFGEAGVAIATLVMTALVLVFAEVLPKTWAISNPERFALTVSPIVRVVVAVFGPVVIGVEWIVRMLLKMLGVNIGDDASILSAHEELRGAVDLQHMEGGLEKGERDRIGGLLDLAELEVSDVMVHRTNMVALNADDDPANLVEAALASPHTRLPLWRGESDNFVGVLHAKDLLRALNQANGDAAKINILEIAGPAWFIPDTTSLQDQLNAFLRKKTHFALVVDEYGEVMGLVTLEDILEEIVGEIADEHDLELEGLRPQADGSVIVDGSVPIRDLNRAADWNLPDDEATTIAGLVIHEARMIPEERQIFTFHGFRFTVLRREKNRITRLRIMSLSKIRAAASA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4S2</accession>
    <name>A0A0M7A4S2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02346</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70078.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671968.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02346"/>
    <dbReference type="EnsemblBacteria" id="CTQ70078">
        <property type="protein sequence ID" value="CTQ70078"/>
        <property type="gene ID" value="LAX5112_02346"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025226">
        <property type="entry name" value="DUF4170"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13773">
        <property type="entry name" value="DUF4170"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ70078.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="79" mass="8952" checksum="973346001183ECF6" modified="2015-12-09" version="1">MSDTEAPKQLLHLVFGGELESPDGLTFRDLDELDIVGIYPNYTEAYTAWKAKAQATVDNAHMRYFIVHMHRLLDPDTAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4U4</accession>
    <name>A0A0M7A4U4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02141</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69512.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671797.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ69512">
        <property type="protein sequence ID" value="CTQ69512"/>
        <property type="gene ID" value="LAX5112_02141"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014976">
        <property type="entry name" value="Cap4_SAVED"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08878">
        <property type="entry name" value="Cap4_SAVED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ69512.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="269" mass="30095" checksum="CBEBDD7019A1CB1E" modified="2015-12-09" version="1">MAAPDHVAWLEDTGDVIETTDGLEAEIWVLQHADDPAILSAWAIHYRQHYCRDEDLPDLVADTGLSNADFLTNIKFPDAAAAPGPSTRSGDFGEILVADFIEYVLGYWCPRHGRFEDRENRNVPSNGTDVIGFKFTGDEQSPDDELLVIESKAGFRPTTANRLQQAIDHSGKDRAREAMSLSAIKQRLLKINRDEALKVGRFQNQADRPFMRTNAAVAVLDDEVFDEMTLDESDASDHPNRDNLRLIIIRGISMMDLVHALYERAANEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5E1</accession>
    <name>A0A0M7A5E1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">ABC transporter arginine-binding protein 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">artJ</name>
        <name evidence="8" type="ORF">LAX5112_01943</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 4">Belongs to the bacterial solute-binding protein 3 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68943.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040452127.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01943"/>
    <dbReference type="EnsemblBacteria" id="CTQ68943">
        <property type="protein sequence ID" value="CTQ68943"/>
        <property type="gene ID" value="LAX5112_01943"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030288">
        <property type="term" value="C:outer membrane-bounded periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015276">
        <property type="term" value="F:ligand-gated ion channel activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071705">
        <property type="term" value="P:nitrogen compound transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001320">
        <property type="entry name" value="Iontro_rcpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005768">
        <property type="entry name" value="Lys_Arg_Orn-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018313">
        <property type="entry name" value="SBP_3_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00062">
        <property type="entry name" value="PBPb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00079">
        <property type="entry name" value="PBPe"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01096">
        <property type="entry name" value="3A0103s03R"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01039">
        <property type="entry name" value="SBP_BACTERIAL_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 5" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="5">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809277" evidence="5">
        <location>
            <begin position="23"/>
            <end position="258"/>
        </location>
    </feature>
    <feature type="domain" description="PBPb" evidence="6">
        <location>
            <begin position="27"/>
            <end position="254"/>
        </location>
    </feature>
    <feature type="domain" description="PBPe" evidence="7">
        <location>
            <begin position="27"/>
            <end position="253"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010333"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003744"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM00062"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="SMART" id="SM00079"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ68943.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="258" mass="27941" checksum="D4450CDF7C78363D" modified="2015-12-09" version="1">MRFVRMAAAAVAVLATVGGATAKDWSKVRIGTEGAYPPFNSLTADGQLVGFDIDIANALCEEMKVECEFVTQDWDGMIPALQAGKYDAIIASMSITEERKQKVDFTNKYYNTPPSIGVPKDTKLTGVTKEDLSGILLGAQSSTTHSNYAEAHFPDAELKLYPTADEYKLDLENGRIDAVIEDVVVLSDWLATDNGACCKVLSTLKSDPVINGEGAGIALRKGEDELKDKFNAAIEAILANGKYKEINDKYFSFDVYGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5R9</accession>
    <name>A0A0M7A5R9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">C signal</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">csgA_2</name>
        <name evidence="2" type="ORF">LAX5112_01955</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the short-chain dehydrogenases/reductases (SDR) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68974.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671637.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01955"/>
    <dbReference type="EnsemblBacteria" id="CTQ68974">
        <property type="protein sequence ID" value="CTQ68974"/>
        <property type="gene ID" value="LAX5112_01955"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00106">
        <property type="entry name" value="adh_short"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU000363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68974.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="226" mass="24304" checksum="10DEA56DE1CBBEB2" modified="2015-12-09" version="1">MTTCLITAINRGIGRELAAAAFAKGWTVYGSVRSEEAAREITEAFQGKVMPLVFDVTDHKAVEAAADALDAAIDVLINNAGIIGPDRQSPLDMDYNGFHETLAINTLGPLAVSQSFLAHILKDKPGTIITVSSQMSWMGYRKSDRIAYRASKAAVNKVMQGLATELEDEGVPVALIDPGWVRTDMGGPEADNCPADVATGILNLSETLTLKDTGKFFKWSGEERPF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6K6</accession>
    <name>A0A0M7A6K6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Soluble aldose sugar dehydrogenase YliI</fullName>
            <ecNumber evidence="4">1.1.5.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">yliI</name>
        <name evidence="4" type="ORF">LAX5112_02426</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.1.5.-" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70241.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02426"/>
    <dbReference type="EnsemblBacteria" id="CTQ70241">
        <property type="protein sequence ID" value="CTQ70241"/>
        <property type="gene ID" value="LAX5112_02426"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.120.10.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011042">
        <property type="entry name" value="6-blade_b-propeller_TolB-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012938">
        <property type="entry name" value="Glc/Sorbosone_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011041">
        <property type="entry name" value="Quinoprot_gluc/sorb_DH"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07995">
        <property type="entry name" value="GSDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50952">
        <property type="entry name" value="SSF50952"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="21"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="domain" description="GSDH" evidence="3">
        <location>
            <begin position="62"/>
            <end position="392"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="194"/>
            <end position="223"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF07995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ70241.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="395" mass="42370" checksum="3101BE7F0301203C" modified="2015-12-09" version="1">MDGFREGDVQHAYWRQGSRHGLLRYAWTVLVAGITFLGLAGSPNQSAHAQSAVTAETVASGLSYPWSVAFLPDGGYLVTERDGVLKVVHEDGRQDVVAGTPEVFAQGQGGLLDVVLSPSFEADQTVYLTFSQGSPEGAGTSLFKATLDGSNGAGYALVEGDTIFAGNNKAFGGRHFGSRLAFDGDGNIYMTLGDRGDGPRSQDTSDHTGSVLRLTPDGDPAPGNPFLDNPAYQPEIWSIGHRNPQSAAVHPETGALWTVEHGARGGDEINIPEAGKNYGWPVISYGRHYSGGKIGEGTEKAGMEQPIFYWDPSIAPSGMAFVTSDKYPDWSGDLLVGALRGQHLAKLTLDGEDVVFEEQLLTDLRERIRDVRQGPDGFIYVLTDSDDGKLIRLRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6T2</accession>
    <name>A0A0M7A6T2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Putative lumazine-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02392</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70172.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672009.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02392"/>
    <dbReference type="EnsemblBacteria" id="CTQ70172">
        <property type="protein sequence ID" value="CTQ70172"/>
        <property type="gene ID" value="LAX5112_02392"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032710">
        <property type="entry name" value="NTF2-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039437">
        <property type="entry name" value="Put_lumazine-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12893">
        <property type="entry name" value="Lumazine_bd_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54427">
        <property type="entry name" value="SSF54427"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ70172.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="128" mass="14326" checksum="905B2ACA63483792" modified="2015-12-09" version="1">MSTALNELQAVIADYFEALYRCDTDLLEKVFHPKAVYATADEAPLLHRTMEAYVPVVANRQSPASRDEVRTDAIDEIQLAGANTAFARVRCSIGDNDFVDFLTFVRDGGRWQIMAKIFQIIPRQSGSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7F2</accession>
    <name>A0A0M7A7F2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6 7">UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase</fullName>
            <ecNumber evidence="6 7">6.3.2.10</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">D-alanyl-D-alanine-adding enzyme</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6 11" type="primary">murF</name>
        <name evidence="11" type="ORF">LAX5112_02611</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6 7">Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6 7">
            <text>ATP + D-alanyl-D-alanine + UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptanedioate = ADP + H(+) + phosphate + UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-gamma-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine</text>
            <dbReference type="Rhea" id="RHEA:28374"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57822"/>
            <dbReference type="ChEBI" id="CHEBI:61386"/>
            <dbReference type="ChEBI" id="CHEBI:83905"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.2.10"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="6 7">Cell wall biogenesis; peptidoglycan biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6 7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the MurCDEF family. MurF subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="6.3.2.10" evidence="6 7"/>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70789.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672193.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02611"/>
    <dbReference type="EnsemblBacteria" id="CTQ70789">
        <property type="protein sequence ID" value="CTQ70789"/>
        <property type="gene ID" value="LAX5112_02611"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00219"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047480">
        <property type="term" value="F:UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008766">
        <property type="term" value="F:UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007049">
        <property type="term" value="P:cell cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008360">
        <property type="term" value="P:regulation of cell shape"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1190.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.190.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02019">
        <property type="entry name" value="MurF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036565">
        <property type="entry name" value="Mur-like_cat_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004101">
        <property type="entry name" value="Mur_ligase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036615">
        <property type="entry name" value="Mur_ligase_C_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013221">
        <property type="entry name" value="Mur_ligase_cen"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000713">
        <property type="entry name" value="Mur_ligase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035911">
        <property type="entry name" value="MurE/MurF_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005863">
        <property type="entry name" value="UDP-N-AcMur_synth"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01225">
        <property type="entry name" value="Mur_ligase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02875">
        <property type="entry name" value="Mur_ligase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08245">
        <property type="entry name" value="Mur_ligase_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53244">
        <property type="entry name" value="SSF53244"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53623">
        <property type="entry name" value="SSF53623"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63418">
        <property type="entry name" value="SSF63418"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01143">
        <property type="entry name" value="murF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 6 7" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="1 6 7" id="KW-0132">Cell division</keyword>
    <keyword evidence="2 6 7" id="KW-0133">Cell shape</keyword>
    <keyword evidence="5 6 7" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 11" id="KW-0436">Ligase</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3 6 7" id="KW-0573">Peptidoglycan synthesis</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Mur_ligase" evidence="8">
        <location>
            <begin position="26"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="domain" description="Mur_ligase_M" evidence="10">
        <location>
            <begin position="112"/>
            <end position="301"/>
        </location>
    </feature>
    <feature type="domain" description="Mur_ligase_C" evidence="9">
        <location>
            <begin position="335"/>
            <end position="401"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02019"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU004136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF01225"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF02875"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF08245"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ70789.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="476" mass="50002" checksum="C73CDEB09CFC0635" modified="2015-12-09" version="1">MSDPLWTSEAFIDACGGTAKGDVGAHITGISVDSRTLEPGDAFIAIKGDRLDGHDYVPVALEAGATLALVAADRLADLPDDGRYVVVDDPLEAMRSLGVAARARTNARIVAVTGSVGKTGTKEALRLALAPSGKVHASVASFNNHWGVPLTLARMPADTDFGVFEIGMNHAGEITPLVQMVRPHVAIITTVEAVHIEFFESVEKIAQAKAEIFNGLEPDGVAILNRDNKQYDLLRFLAATAAVRNVQTFGQNGSEDSHLKMAVATDDGTSVEASILGQDVSYGIGAPGAHHVQNSLAVLTAVADLGADLQEGAAALGGMTAPKGRGEQCRLSVGGGEVQLIDESYNANPASMRAAFSVLAQATLGGSGRRIAVIGDMRELGTDTDQLHAELAGPIRDAAIDRVFCAGPHMTALWDKLPDEIRAYHREEAKDLIELLVNDVQPGDVVMIKGSLGTRMGPLVEALKKEYPPADDIEAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A820</accession>
    <name>A0A0M7A820_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">2-hydroxychromene-2-carboxylate isomerase</fullName>
            <ecNumber evidence="1">5.99.1.4</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">nahD_1</name>
        <name evidence="4" type="ORF">LAX5112_02240</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>2-hydroxychromene-2-carboxylate = (3E)-4-(2-hydroxyphenyl)-2-oxobut-3-enoate</text>
            <dbReference type="Rhea" id="RHEA:27401"/>
            <dbReference type="ChEBI" id="CHEBI:59350"/>
            <dbReference type="ChEBI" id="CHEBI:59353"/>
            <dbReference type="EC" id="5.99.1.4"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the GST superfamily. NadH family.</text>
    </comment>
    <dbReference type="EC" id="5.99.1.4" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69764.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671868.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02240"/>
    <dbReference type="EnsemblBacteria" id="CTQ69764">
        <property type="protein sequence ID" value="CTQ69764"/>
        <property type="gene ID" value="LAX5112_02240"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018845">
        <property type="term" value="F:2-hydroxychromene-2-carboxylate isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901170">
        <property type="term" value="P:naphthalene catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03022">
        <property type="entry name" value="DsbA_HCCA_Iso"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001853">
        <property type="entry name" value="DSBA-like_thioredoxin_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014440">
        <property type="entry name" value="HCCAis_GSTk"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044087">
        <property type="entry name" value="NahD-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01323">
        <property type="entry name" value="DSBA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006386">
        <property type="entry name" value="HCCAis_GSTk"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 4" id="KW-0413">Isomerase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DSBA" evidence="3">
        <location>
            <begin position="21"/>
            <end position="207"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="2">
        <location>
            <position position="30"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRNR" id="PIRNR006386"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR006386-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01323"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ69764.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="219" mass="24197" checksum="8039F8012E2BA34B" modified="2015-12-09" version="1">MTTDPKLQSNVVQLHAAKQPTIEFWYEFGSTYSYLSAMRIETQARDAGVSLSWRPFLLGPIFKKSGWDTSPFNLYPAKGRYMWRDMERQCARYGLPLTIPDPFPQSGLLAARIAQVGRTQPWIGDFTRAVFVAEFGSGEDISDEAFLAHLLLEAGAPAKEVLEASKSPDIKDALRASVGEAEEKGIFGAPSFVLQTGELFWGDDRLADALEMAAEIAKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8G7</accession>
    <name>A0A0M7A8G7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 5">30S ribosomal protein S15</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3 7" type="primary">rpsO</name>
        <name evidence="7" type="ORF">LAX5112_02808</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.</text>
    </comment>
    <comment type="function">
        <text evidence="3 6">One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">Part of the 30S ribosomal subunit. Forms a bridge to the 50S subunit in the 70S ribosome, contacting the 23S rRNA.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 4">Belongs to the universal ribosomal protein uS15 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71398.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451314.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02808"/>
    <dbReference type="EnsemblBacteria" id="CTQ71398">
        <property type="protein sequence ID" value="CTQ71398"/>
        <property type="gene ID" value="LAX5112_02808"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00353">
        <property type="entry name" value="Ribosomal_S15p_S13e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01343_B">
        <property type="entry name" value="Ribosomal_S15_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000589">
        <property type="entry name" value="Ribosomal_S15"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005290">
        <property type="entry name" value="Ribosomal_S15_bac-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009068">
        <property type="entry name" value="S15_NS1_RNA-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23321">
        <property type="entry name" value="PTHR23321"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00312">
        <property type="entry name" value="Ribosomal_S15"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01387">
        <property type="entry name" value="Ribosomal_S15"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47060">
        <property type="entry name" value="SSF47060"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00952">
        <property type="entry name" value="S15_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00362">
        <property type="entry name" value="RIBOSOMAL_S15"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="1 3 4" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="3 6" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="3 6" id="KW-0699">rRNA-binding</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01343"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003919"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU003920"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU004524"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ71398.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="89" mass="10330" checksum="BD6679642B5F559D" modified="2015-12-09" version="1">MSITAERKAELMKEFATKEGDTGSPEVQVAILTERINNLTEHFKEHGKDNHSRRGLLKMVASRRSLLDYTRGKSEERYKTLIERLGIRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8Y4</accession>
    <name>A0A0M7A8Y4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">UGMP family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02787</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71339.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672337.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02787"/>
    <dbReference type="EnsemblBacteria" id="CTQ71339">
        <property type="protein sequence ID" value="CTQ71339"/>
        <property type="gene ID" value="LAX5112_02787"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0002949">
        <property type="term" value="P:tRNA threonylcarbamoyladenosine modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000905">
        <property type="entry name" value="Gcp-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022496">
        <property type="entry name" value="T6A_TsaB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11735">
        <property type="entry name" value="PTHR11735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11735:SF11">
        <property type="entry name" value="PTHR11735:SF11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00814">
        <property type="entry name" value="TsaD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="SSF53067"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03725">
        <property type="entry name" value="T6A_YeaZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TsaD" evidence="2">
        <location>
            <begin position="33"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="201"/>
            <end position="225"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00814"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ71339.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="225" mass="23119" checksum="F0A57F93248B659C" modified="2015-12-09" version="1">MRVLAIDTALANCAAAVLDDGTASACFETCGEEIGRGHAEKLMDMIGTVMAESSTAFSDLDRVAVTVGPGSFTGLRVGLAVARGFGLVLEKPVVGVTTLAAIARSCAPGGNGSPILVALTGKGDEVYCQLFSHDGEPLDFAGVHTLSDLAMTLPEDIRFAGSAADRVADAVGAENTCVISRCGYPGIRAVAELGLITDPRGASPSPLYLRPPDATPQTKGRIERQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A926</accession>
    <name>A0A0M7A926_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02591</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70730.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70730">
        <property type="protein sequence ID" value="CTQ70730"/>
        <property type="gene ID" value="LAX5112_02591"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ70730.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="62" mass="7146" checksum="793A55275AC87654" modified="2015-12-09" version="1">MTELWDEILHCKITNYYNIFQNFTDLCIATSEESAVCVRAVTHRRPNRGTVVQIVPATFIDT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A982</accession>
    <name>A0A0M7A982_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Inner membrane ABC transporter permease protein YejB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">yejB</name>
        <name evidence="8" type="ORF">LAX5112_02819</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71429.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02819"/>
    <dbReference type="EnsemblBacteria" id="CTQ71429">
        <property type="protein sequence ID" value="CTQ71429"/>
        <property type="gene ID" value="LAX5112_02819"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="150"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="183"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="239"/>
            <end position="262"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="297"/>
            <end position="320"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="342"/>
            <end position="363"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="7">
        <location>
            <begin position="148"/>
            <end position="363"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="58"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="58"/>
            <end position="83"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ71429.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="381" mass="42111" checksum="A6C850943ED21D62" modified="2015-12-09" version="1">MQRDKKTPMGAYILRRLLLMIPTLVGIMAINFFIIQFAPGGPVERVIAQISGTDVDATSRISGGGSDMGNIGNESSGASAGGGDSVTSKYRGAQGLDPEFIKELEAQFGFDKPPLERFLNMLWNYARFDFGDSYFRDIRILDLIAEKLPVSISLGLWMTLISYAVSIPLGIRKAVSDGSRFDVWTSGVIVVAYAIPGFLFAVLLIVLFAGGSFWDIFPLRGLVSDNWESLSWPERILDYFWHLALPLTAMVLSAFATTTLLTKNSFLDEIRKQYVITARAKGLTESQVLYGHVFRNAMLIVVAGFPGAFISSFFAGSLLIETIFSLDGLGLLGFESIINRDYAVVFATLYIFSLMGLLVNLISDLTYTWIDPRIDFESREV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9L0</accession>
    <name>A0A0M7A9L0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Putative membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_02929</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71788.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672448.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02929"/>
    <dbReference type="EnsemblBacteria" id="CTQ71788">
        <property type="protein sequence ID" value="CTQ71788"/>
        <property type="gene ID" value="LAX5112_02929"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009056">
        <property type="entry name" value="Cyt_c-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036909">
        <property type="entry name" value="Cyt_c-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010389">
        <property type="entry name" value="Urate_ox_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06181">
        <property type="entry name" value="Urate_ox_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46626">
        <property type="entry name" value="SSF46626"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51007">
        <property type="entry name" value="CYTC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 4" id="KW-0349">Heme</keyword>
    <keyword evidence="3 4" id="KW-0408">Iron</keyword>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="2 4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="17"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="87"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="117"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="149"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="176"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="229"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="252"/>
            <end position="271"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="283"/>
            <end position="303"/>
        </location>
    </feature>
    <feature type="domain" description="Cytochrome c" evidence="6">
        <location>
            <begin position="314"/>
            <end position="409"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00433"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ71788.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="419" mass="47181" checksum="DEAEE6ED08B9DBF7" modified="2015-12-09" version="1">MLDIAIIWDWLMFAVRWLHVITAIAWIGSSFYFIALDLGLKKVPHLPVGAHGEEWQVHGGGFYHIQKYLVAPANMPEHLIWFKWESYATWLSGAALLMMVYWVGGELYLIDPAKADLALWQGILISAASLSIGWLVYDFLCKSKLGDNPTLLMVLLFALLVVMGYGYNLVFTGRATMLHLGAFTATIMSANVFFIIIPNQKIVVADLKAGRTPDPKYGKIAKLRSTHNNYLTLPVIFLMLSNHYPLAFASEYNWVIAALVFLMGVTIRHYFNSNHAGTGNPTWTWLVTALLFLGVIWLSMAPLQHDTYEASEARPLTKTERIFANAEGFEQVMAIVPGRCAMCHAREPFYEGIHWAPKDVLLETEADVVRSAKQVYLQAGVTNAMPPANVSHMEESERRAIVAWYRNATKDQPFWIGAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9L7</accession>
    <name>A0A0M7A9L7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">AFG1-like ATPase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02865</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71559.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672385.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02865"/>
    <dbReference type="EnsemblBacteria" id="CTQ71559">
        <property type="protein sequence ID" value="CTQ71559"/>
        <property type="gene ID" value="LAX5112_02865"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005654">
        <property type="entry name" value="ATPase_AFG1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12169">
        <property type="entry name" value="PTHR12169"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03969">
        <property type="entry name" value="AFG1_ATPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ71559.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="396" mass="44680" checksum="632364739FCC1B5A" modified="2015-12-09" version="1">MDLQDGAPHLKLELPVNRALGARYDALVASSDISEDPVQREAVRHLDLLNTRLGETRLASKKSSLGWLFAKKKNQLWASVQGLYMWGGVGRGKTMLMDLFYEVTVIRRKRRVHFHEFMADVHDRIHAHRQAHKRGEVKGDDPIPPVAAQIAEETRLLLFDEFSVTDIADAMILGRLFTQLFELGVIVVATSNVNPDLLYKDGLNRQLFMPFIGLLKSKVSILHLDSPTDYRLEKLAGSPVYLTPLGDEARAQMNDLWQRLTHGMPPHKEELENKGRKIPVPCTAAGAARFTFDDLCMQPLGASDYLRIAHAYSTLFLDDVPVLSKARRNEAKRFITLIDTLYDNGIKLIISAAAEPADLYMSTDGTEAFEFDRTASRLIEMRSEAYLAGERRERHA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="33" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9N0</accession>
    <name>A0A0M7A9N0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">1-deoxy-D-xylulose-5-phosphate synthase</fullName>
            <ecNumber evidence="10">2.2.1.7</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10">1-deoxyxylulose-5-phosphate synthase</fullName>
            <shortName evidence="10">DXP synthase</shortName>
            <shortName evidence="10">DXPS</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="12" type="primary">dxs_2</name>
        <name evidence="10" type="synonym">dxs</name>
        <name evidence="12" type="ORF">LAX5112_02936</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>D-glyceraldehyde 3-phosphate + H(+) + pyruvate = 1-deoxy-D-xylulose 5-phosphate + CO2</text>
            <dbReference type="Rhea" id="RHEA:12605"/>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:57792"/>
            <dbReference type="ChEBI" id="CHEBI:59776"/>
            <dbReference type="EC" id="2.2.1.7"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="10">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="10">Binds 1 Mg(2+) ion per subunit.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="10">
            <name>thiamine diphosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58937"/>
        </cofactor>
        <text evidence="10">Binds 1 thiamine pyrophosphate per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="1 10">Metabolic intermediate biosynthesis; 1-deoxy-D-xylulose 5-phosphate biosynthesis; 1-deoxy-D-xylulose 5-phosphate from D-glyceraldehyde 3-phosphate and pyruvate: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3 10">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 10">Belongs to the transketolase family. DXPS subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.2.1.7" evidence="10"/>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71808.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672453.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02936"/>
    <dbReference type="EnsemblBacteria" id="CTQ71808">
        <property type="protein sequence ID" value="CTQ71808"/>
        <property type="gene ID" value="LAX5112_02936"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00064">
        <property type="reaction ID" value="UER00091"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008661">
        <property type="term" value="F:1-deoxy-D-xylulose-5-phosphate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030976">
        <property type="term" value="F:thiamine pyrophosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052865">
        <property type="term" value="P:1-deoxy-D-xylulose 5-phosphate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016114">
        <property type="term" value="P:terpenoid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009228">
        <property type="term" value="P:thiamine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd02007">
        <property type="entry name" value="TPP_DXS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.920">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00315">
        <property type="entry name" value="DXP_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005477">
        <property type="entry name" value="Dxylulose-5-P_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029061">
        <property type="entry name" value="THDP-binding"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009014">
        <property type="entry name" value="Transketo_C/PFOR_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005475">
        <property type="entry name" value="Transketolase-like_Pyr-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020826">
        <property type="entry name" value="Transketolase_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033248">
        <property type="entry name" value="Transketolase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005474">
        <property type="entry name" value="Transketolase_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43322">
        <property type="entry name" value="PTHR43322"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13292">
        <property type="entry name" value="DXP_synthase_N"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02779">
        <property type="entry name" value="Transket_pyr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02780">
        <property type="entry name" value="Transketolase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00861">
        <property type="entry name" value="Transket_pyr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52518">
        <property type="entry name" value="SSF52518"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52922">
        <property type="entry name" value="SSF52922"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00801">
        <property type="entry name" value="TRANSKETOLASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00802">
        <property type="entry name" value="TRANSKETOLASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 10" id="KW-0414">Isoprene biosynthesis</keyword>
    <keyword evidence="6 10" id="KW-0460">Magnesium</keyword>
    <keyword evidence="5 10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 10" id="KW-0784">Thiamine biosynthesis</keyword>
    <keyword evidence="8 10" id="KW-0786">Thiamine pyrophosphate</keyword>
    <keyword evidence="4 10 12" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="TRANSKETOLASE_1" evidence="11">
        <location>
            <begin position="39"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="region of interest" description="Thiamine pyrophosphate binding" evidence="10">
        <location>
            <begin position="124"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="region of interest" description="Thiamine pyrophosphate binding" evidence="10">
        <location>
            <begin position="156"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="83"/>
        </location>
        <ligand>
            <name>thiamine diphosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58937"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="155"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="184"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="261"/>
        </location>
        <ligand>
            <name>thiamine diphosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58937"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="343"/>
        </location>
        <ligand>
            <name>thiamine diphosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58937"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011081"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS00801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ71808.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="631" mass="67376" checksum="DCF7ADE6D1D22E1D" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABM4</accession>
    <name>A0A0M7ABM4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Hemolysin IA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">apxIA_2</name>
        <name evidence="2" type="ORF">LAX5112_02932</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71796.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672450.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ71796">
        <property type="protein sequence ID" value="CTQ71796"/>
        <property type="gene ID" value="LAX5112_02932"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004601">
        <property type="term" value="F:peroxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006979">
        <property type="term" value="P:response to oxidative stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.150.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019791">
        <property type="entry name" value="Haem_peroxidase_animal"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010255">
        <property type="entry name" value="Haem_peroxidase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037120">
        <property type="entry name" value="Haem_peroxidase_sf_animal"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018511">
        <property type="entry name" value="Hemolysin-typ_Ca-bd_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001343">
        <property type="entry name" value="Hemolysn_Ca-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011049">
        <property type="entry name" value="Serralysin-like_metalloprot_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03098">
        <property type="entry name" value="An_peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00353">
        <property type="entry name" value="HemolysinCabind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00457">
        <property type="entry name" value="ANPEROXIDASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48113">
        <property type="entry name" value="SSF48113"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51120">
        <property type="entry name" value="SSF51120"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00330">
        <property type="entry name" value="HEMOLYSIN_CALCIUM"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50292">
        <property type="entry name" value="PEROXIDASE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="11"/>
            <end position="25"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71796.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="689" mass="72942" checksum="B313501E34F643E4" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABP5</accession>
    <name>A0A0M7ABP5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">VWA domain containing CoxE-like protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02736</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71153.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672285.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02736"/>
    <dbReference type="EnsemblBacteria" id="CTQ71153">
        <property type="protein sequence ID" value="CTQ71153"/>
        <property type="gene ID" value="LAX5112_02736"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ71153.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="391" mass="45470" checksum="7FE8FD1AD96A91DF" modified="2015-12-09" version="1">MFITFFTELKSAGIPVSLREYLTLMEALDKDLAERSVEDFYYLARLSLVKDESNLDKFDRVFGTVFKGLELMSDVPVTEIPEDWLRKLAEKHLSEEEKAQIEAMGGFEKLMETLAERLKEQEKRHQGGNKWIGTAGTSPFGAYGYNPEGIRIGQKESRHRRAVKVWDKREFKDLDDTQLLGSRNIQVALKRLRNFARTGAAEELDLDHTIKATAHKGLLDIKMRPERHNAVKVLLFFDIGGSMDDHIRVCEELFSAARSEFKVMEHFYFHNCLYETVWKENRRRHTERLPTMDVLHKYPSDYKIIFVGDASMSPYEIAYPGGSVEHWNEEAGSAWMQRVTGLYNSAVWLNPVRQEHWRYTPSIQMMQELMENRMFPLTVEGLTDAMKELAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AC99</accession>
    <name>A0A0M7AC99_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">D-beta-hydroxybutyrate dehydrogenase</fullName>
            <ecNumber evidence="2">1.1.1.30</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">bdhA_2</name>
        <name evidence="2" type="ORF">LAX5112_03278</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the short-chain dehydrogenases/reductases (SDR) family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.30" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72745.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672821.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03278"/>
    <dbReference type="EnsemblBacteria" id="CTQ72745">
        <property type="protein sequence ID" value="CTQ72745"/>
        <property type="gene ID" value="LAX5112_03278"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003858">
        <property type="term" value="F:3-hydroxybutyrate dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00106">
        <property type="entry name" value="adh_short"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU000363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72745.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="267" mass="27337" checksum="23EFF3E9AFC0C32A" modified="2015-12-09" version="1">MSDLTGKTALVTGSVQGIGLAIAKSLAGAGARVGVHGLATADQAAEVVAAVKEAGAPEARFFDANMRDVAAIEAMMQEVSDWGGADILVNNAGIQKTASYAELDAATWEAIIDVNLSGAFHTMRKALPVMAERGYGRVINIASVHGLVASVNKAPYVASKFGLVGMSKVAALEYAAAGTKAKGGVTVNCIAPGWTETAIIEPQVAARAALHGGDRDLGIADLLAEKQPTRRTSDPSEIGALALWLCHPVAHNVTGTTIPVDGGWTAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACC6</accession>
    <name>A0A0M7ACC6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Phospholipase YtpA</fullName>
            <ecNumber evidence="2">3.1.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ytpA</name>
        <name evidence="2" type="ORF">LAX5112_03126</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.1.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72287.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672599.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03126"/>
    <dbReference type="EnsemblBacteria" id="CTQ72287">
        <property type="protein sequence ID" value="CTQ72287"/>
        <property type="gene ID" value="LAX5112_03126"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022742">
        <property type="entry name" value="Hydrolase_4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12146">
        <property type="entry name" value="Hydrolase_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Hydrolase_4" evidence="1">
        <location>
            <begin position="42"/>
            <end position="330"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72287.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="359" mass="39806" checksum="613E79F3656E1979" modified="2015-12-09" version="1">MSLIDTKDNPIPDGAVSGFLEMNGRIKLRYAHWPAAPGESCRGTVTILQGRAEFIEKYFEVVSDLRSRGFAVVAFDWRGQGGSTRLTRSPARGHVTNFKRYQQDLLAILKNVSLATYPGPHFALAHSTGGLILMSCSQRLRTMLDRAVITAPLLAIAPRDWESDLTAGLRKLLRILTLGLFGRPQLRATRPSTSRLTETLGFGLARICAWTFLGQLYVPGGNGKLTLPFEENRQTTDRQRYHRFSKVLEEHTEIGIGSPTMSWLNAAAKAMKSMRQRSAGPEMRLPCLILGAGRDRIVSTPAIEEFVSRTKNASYIEISGAEHELLMEADRYRDQVWAAFDAFVPGLEADLVLDQAGAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADF9</accession>
    <name>A0A0M7ADF9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">D-malate degradation protein R</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">dmlR_9</name>
        <name evidence="3" type="ORF">LAX5112_03366</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72919.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008191513.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03366"/>
    <dbReference type="EnsemblBacteria" id="CTQ72919">
        <property type="protein sequence ID" value="CTQ72919"/>
        <property type="gene ID" value="LAX5112_03366"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00039">
        <property type="entry name" value="HTHLYSR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="8"/>
            <end position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ72919.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="304" mass="33854" checksum="E41E366C34050525" modified="2015-12-09" version="1">MNWQSITFDWNQARAFLVTAEEGSLSAAARALNLTQPTLSRQVAALEETLGVTLFERVSKSLVLTEAGVELAEHVRAMGEAASRVSLAASGQSQQIEGMVTISTTDILGIYLLPEILRNLRRKAPGIEIRIRCTNSLSDLRRREADIAIRHVEPDHPDLYARKLYDASAKVYGARSYLSRFGDSLSMKDAGAHDFIGFDDNPQLVGHLRAMGLPVTEANIKLSSPSGAVAWEYVRRGLGLGIMADEIAACCPELVPAFDDLTEVYFPVWLVTHRELHTSRRIRIVFDHLVEHLRHKQPHQPHEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADH6</accession>
    <name>A0A0M7ADH6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">NADH oxidase</fullName>
            <ecNumber evidence="2">1.-.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03376</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.-.-.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72939.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03376"/>
    <dbReference type="EnsemblBacteria" id="CTQ72939">
        <property type="protein sequence ID" value="CTQ72939"/>
        <property type="gene ID" value="LAX5112_03376"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010181">
        <property type="term" value="F:FMN binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001155">
        <property type="entry name" value="OxRdtase_FMN_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045247">
        <property type="entry name" value="Oye-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22893">
        <property type="entry name" value="PTHR22893"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00724">
        <property type="entry name" value="Oxidored_FMN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Oxidored_FMN" evidence="1">
        <location>
            <begin position="12"/>
            <end position="344"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00724"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72939.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="374" mass="40707" checksum="65E32C7A212234AB" modified="2015-12-09" version="1">MTLTFPVLQEKTIKTSTFSNRYVLAPMSRASAGADGVPTESMAEYYAGFARGGYGLIITEGAFTDEKWAQCYSGQPGLVNDAQEMGWQRVVQAIKAESGKVILQLIHAGAVSQHIMEPVAPSPVRPVGSMLQGYGHRQGAYDVPDELSLAQIEIIKRGFYQAALRAEAAGFDGVEIHCANGYLLDQFLTAETNLRQDQYGGTLENRIRLTQEIIREAQGATKSDFIVGVRLSQAKANIQDYFWPNGLADAKVIFQAVADAGAEFIHLASEKEGYAVHSYTEAGENLTAYARDLTGLPVVANGGLHVVEDANELIASRKADFVSIGKTAMLNPDLPKRVAEGRELQEFTFDMFKYGVTIEAQQQWEGEQAALGPT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEC8</accession>
    <name>A0A0M7AEC8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Leucyl/phenylalanyl-tRNA--protein transferase</fullName>
            <ecNumber evidence="4">2.3.2.6</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">L/F-transferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="4">Leucyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="4">Phenyalanyltransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="4 5" type="primary">aat</name>
        <name evidence="5" type="ORF">LAX5112_03544</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>L-leucyl-tRNA(Leu) + N-terminal L-arginyl-[protein] = H(+) + N-terminal L-leucyl-L-arginyl-[protein] + tRNA(Leu)</text>
            <dbReference type="Rhea" id="RHEA:50416"/>
            <dbReference type="Rhea" id="RHEA-COMP:9613"/>
            <dbReference type="Rhea" id="RHEA-COMP:9622"/>
            <dbReference type="Rhea" id="RHEA-COMP:12672"/>
            <dbReference type="Rhea" id="RHEA-COMP:12673"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:64719"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78494"/>
            <dbReference type="ChEBI" id="CHEBI:133044"/>
            <dbReference type="EC" id="2.3.2.6"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>L-leucyl-tRNA(Leu) + N-terminal L-lysyl-[protein] = H(+) + N-terminal L-leucyl-L-lysyl-[protein] + tRNA(Leu)</text>
            <dbReference type="Rhea" id="RHEA:12340"/>
            <dbReference type="Rhea" id="RHEA-COMP:9613"/>
            <dbReference type="Rhea" id="RHEA-COMP:9622"/>
            <dbReference type="Rhea" id="RHEA-COMP:12670"/>
            <dbReference type="Rhea" id="RHEA-COMP:12671"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:65249"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78494"/>
            <dbReference type="ChEBI" id="CHEBI:133043"/>
            <dbReference type="EC" id="2.3.2.6"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>an N-terminal L-alpha-aminoacyl-[protein] + L-phenylalanyl-tRNA(Phe) = an N-terminal L-phenylalanyl-L-alpha-aminoacyl-[protein] + tRNA(Phe)</text>
            <dbReference type="Rhea" id="RHEA:43632"/>
            <dbReference type="Rhea" id="RHEA-COMP:9668"/>
            <dbReference type="Rhea" id="RHEA-COMP:9699"/>
            <dbReference type="Rhea" id="RHEA-COMP:10636"/>
            <dbReference type="Rhea" id="RHEA-COMP:10637"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78531"/>
            <dbReference type="ChEBI" id="CHEBI:78597"/>
            <dbReference type="ChEBI" id="CHEBI:83561"/>
            <dbReference type="EC" id="2.3.2.6"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the L/F-transferase family.</text>
    </comment>
    <dbReference type="EC" id="2.3.2.6" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73438.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008189264.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03544"/>
    <dbReference type="EnsemblBacteria" id="CTQ73438">
        <property type="protein sequence ID" value="CTQ73438"/>
        <property type="gene ID" value="LAX5112_03544"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008914">
        <property type="term" value="F:leucyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030163">
        <property type="term" value="P:protein catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.630.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00688">
        <property type="entry name" value="Leu_Phe_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004616">
        <property type="entry name" value="Leu/Phe-tRNA_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042203">
        <property type="entry name" value="Leu/Phe-tRNA_Trfase_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30098">
        <property type="entry name" value="PTHR30098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03588">
        <property type="entry name" value="Leu_Phe_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00667">
        <property type="entry name" value="aat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 5" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="1 4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4 5" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00688"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ73438.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="228" mass="25325" checksum="7F9D464135132F49" modified="2015-12-09" version="1">MAGYQNDVIFEITPQVLLKAYACGLFPMAESADDPGLFWLEPEQRGILPLDTVHVPRRLKRTIRGDFFEIRTSTDFQGVIDGCSAPMPGRQKTWINREIRRLYGELFEMGHCHTVEAWQDGDLVGGLYGVSLNGAFFGESMFSFKTDASKVCLIHLVARLKKGGYTLLDTQFVTGHLAKFGTLEVPKDEYNVLLSSALQRETDFYALSTKATGAEILSILDGQTDASS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEG8</accession>
    <name>A0A0M7AEG8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">YHS domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03405</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ73017.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672832.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ73017">
        <property type="protein sequence ID" value="CTQ73017"/>
        <property type="gene ID" value="LAX5112_03405"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009078">
        <property type="entry name" value="Ferritin-like_SF"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47240">
        <property type="entry name" value="SSF47240"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809384" evidence="1">
        <location>
            <begin position="26"/>
            <end position="157"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73017.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="157" mass="16907" checksum="C7546A2A6660612D" modified="2015-12-09" version="1">MFANLIRGTVAAAVVAGTLVSSAFAAGVDVNATVTGLALRGVDPVSYFTNGAPKDGDFSITSVHNGATYRFTSEENKNLFEKNPEKYLPQYGGFCAFGTAMGVKVDGDPDLWKIVDGKLYLNLSESIQERWNKDTAGFIETGNDKWAEIENVDPSEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEQ5</accession>
    <name>A0A0M7AEQ5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Nitrogen regulatory protein P-II</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">glnB</name>
        <name evidence="8" type="ORF">LAX5112_03520</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">In nitrogen-limiting conditions, when the ratio of Gln to 2-ketoglutarate decreases, P-II is uridylylated to P-II-UMP. P-II-UMP allows the deadenylation of glutamine synthetase (GS), thus activating the enzyme. Conversely, in nitrogen excess P-II is deuridylated and promotes the adenylation of GS. P-II indirectly controls the transcription of the GS gene (glnA). P-II prevents NR-II-catalyzed conversion of NR-I to NR-I-phosphate, the transcriptional activator of glnA. When P-II is uridylylated to P-II-UMP, these events are reversed.</text>
    </comment>
    <comment type="subunit">
        <text evidence="1">Homotrimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the P(II) protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73369.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008195509.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03520"/>
    <dbReference type="EnsemblBacteria" id="CTQ73369">
        <property type="protein sequence ID" value="CTQ73369"/>
        <property type="gene ID" value="LAX5112_03520"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030234">
        <property type="term" value="F:enzyme regulator activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006808">
        <property type="term" value="P:regulation of nitrogen utilization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002187">
        <property type="entry name" value="N-reg_PII"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011322">
        <property type="entry name" value="N-reg_PII-like_a/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015867">
        <property type="entry name" value="N-reg_PII/ATP_PRibTrfase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017918">
        <property type="entry name" value="N-reg_PII_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002332">
        <property type="entry name" value="N-reg_PII_urydylation_site"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30115">
        <property type="entry name" value="PTHR30115"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00543">
        <property type="entry name" value="P-II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF039144">
        <property type="entry name" value="GlnB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00340">
        <property type="entry name" value="PIIGLNB"/>
    </dbReference>
    <dbReference type="SMART" id="SM00938">
        <property type="entry name" value="P-II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54913">
        <property type="entry name" value="SSF54913"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00638">
        <property type="entry name" value="PII_GLNB_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51343">
        <property type="entry name" value="PII_GLNB_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00496">
        <property type="entry name" value="PII_GLNB_UMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 6" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="modified residue" description="O-UMP-tyrosine" evidence="5">
        <location>
            <position position="51"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00011233"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00015681"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00025238"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR039144-50"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR602187-50"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ73369.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="112" mass="12231" checksum="D2946643306627DF" modified="2015-12-09" version="1">MKKIEAIIKPFKLDEVKEALQEVGLQGITVTEAKGFGRQKGHTELYRGAEYVVDFLPKVKVEIVLGSDMVDKAVEAIRNAAQTGRIGDGKIFVSNIEEAVRIRTGESGTDAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AF81</accession>
    <name>A0A0M7AF81_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 12">Pyruvate kinase</fullName>
            <ecNumber evidence="4 12">2.7.1.40</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="primary">ttuE</name>
        <name evidence="15" type="ORF">LAX5112_03133</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="12">
            <text>ATP + pyruvate = ADP + H(+) + phosphoenolpyruvate</text>
            <dbReference type="Rhea" id="RHEA:18157"/>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:58702"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.1.40"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="2 12">Carbohydrate degradation; glycolysis; pyruvate from D-glyceraldehyde 3-phosphate: step 5/5.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 12">Belongs to the pyruvate kinase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.40" evidence="4 12"/>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72304.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672603.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03133"/>
    <dbReference type="EnsemblBacteria" id="CTQ72304">
        <property type="protein sequence ID" value="CTQ72304"/>
        <property type="gene ID" value="LAX5112_03133"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00109">
        <property type="reaction ID" value="UER00188"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030955">
        <property type="term" value="F:potassium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004743">
        <property type="term" value="F:pyruvate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.33.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1380.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001697">
        <property type="entry name" value="Pyr_Knase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015813">
        <property type="entry name" value="Pyrv/PenolPyrv_Kinase-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040442">
        <property type="entry name" value="Pyrv_Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011037">
        <property type="entry name" value="Pyrv_Knase-like_insert_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018209">
        <property type="entry name" value="Pyrv_Knase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015793">
        <property type="entry name" value="Pyrv_Knase_brl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015795">
        <property type="entry name" value="Pyrv_Knase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036918">
        <property type="entry name" value="Pyrv_Knase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015806">
        <property type="entry name" value="Pyrv_Knase_insert_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11817">
        <property type="entry name" value="PTHR11817"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00224">
        <property type="entry name" value="PK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02887">
        <property type="entry name" value="PK_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01050">
        <property type="entry name" value="PYRUVTKNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50800">
        <property type="entry name" value="SSF50800"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51621">
        <property type="entry name" value="SSF51621"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52935">
        <property type="entry name" value="SSF52935"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01064">
        <property type="entry name" value="pyruv_kin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00110">
        <property type="entry name" value="PYRUVATE_KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="10 12" id="KW-0324">Glycolysis</keyword>
    <keyword evidence="7 12 15" id="KW-0418">Kinase</keyword>
    <keyword evidence="9 12" id="KW-0460">Magnesium</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11 15" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="12 15" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PK" evidence="13">
        <location>
            <begin position="5"/>
            <end position="335"/>
        </location>
    </feature>
    <feature type="domain" description="PK_C" evidence="14">
        <location>
            <begin position="355"/>
            <end position="467"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001958"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004997"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008663"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012142"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023152"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023317"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU000504"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF00224"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF02887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="CTQ72304.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="478" mass="51373" checksum="5FC287C714E67195" modified="2015-12-09" version="1">MRRNRRVKILATLGPSSSEQDIIEKLYVAGADVFRINMSHTDHDRLKMLVSRIRAVEEVTGRPIGILADLQGPKLRVGTFGDGPVMLENGAVFTLDADTSPGDVNRVHLPHPEILKALEPGHRLLLDDGKIQLRVTESSPAKAQTEVIVGGKLSDRKGVSVPDSEIATSAMTEKDHKDLIAALEQNVDWVALSFVQRPDDLAEVRKITRGRAGVLAKIEKPQAIGRLDEIIELSDAIMVARGDLGVEMPLEQVPGLQKRITRACRRAGKPVVIATQMLESMITAPVPTRAEVSDVATAVFEGADAVMLSAESAAGDFPIEAVSTMDRIAQQVEQDPNYRTIIYAQRTEPEATGSDAISAAARQIAETLNLAAVVCYTTSGATGLRASRERPSSPIIVLSPVMATARRLSLGWGLHCVVSEDAANEEDMIDRACRISHSEGWAKPGQRIIITAGVPFGTPGSTNMLRIAFVGTDGQGGI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFD5</accession>
    <name>A0A0M7AFD5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Cyclic di-GMP phosphodiesterase Gmr</fullName>
            <ecNumber evidence="6">3.1.4.52</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">gmr_10</name>
        <name evidence="6" type="ORF">LAX5112_03367</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.4.52" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72920.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72920">
        <property type="protein sequence ID" value="CTQ72920"/>
        <property type="gene ID" value="LAX5112_03367"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071111">
        <property type="term" value="F:cyclic-guanylate-specific phosphodiesterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd01948">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01949">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00130">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.450">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001633">
        <property type="entry name" value="EAL_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035919">
        <property type="entry name" value="EAL_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000160">
        <property type="entry name" value="GGDEF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001610">
        <property type="entry name" value="PAC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000014">
        <property type="entry name" value="PAS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000700">
        <property type="entry name" value="PAS-assoc_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035965">
        <property type="entry name" value="PAS-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00563">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00990">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13426">
        <property type="entry name" value="PAS_9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00052">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00267">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00086">
        <property type="entry name" value="PAC"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00091">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141868">
        <property type="entry name" value="SSF141868"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55785">
        <property type="entry name" value="SSF55785"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00254">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00229">
        <property type="entry name" value="sensory_box"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50883">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50887">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50113">
        <property type="entry name" value="PAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50112">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="167"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="domain" description="PAS" evidence="2">
        <location>
            <begin position="209"/>
            <end position="272"/>
        </location>
    </feature>
    <feature type="domain" description="PAC" evidence="3">
        <location>
            <begin position="275"/>
            <end position="327"/>
        </location>
    </feature>
    <feature type="domain" description="GGDEF" evidence="5">
        <location>
            <begin position="359"/>
            <end position="493"/>
        </location>
    </feature>
    <feature type="domain" description="EAL" evidence="4">
        <location>
            <begin position="502"/>
            <end position="756"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50112"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50113"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ72920.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="900" mass="101025" checksum="639DBF72C8C2B637" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFR7</accession>
    <name>A0A0M7AFR7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 5">Argininosuccinate lyase</fullName>
            <shortName evidence="5">ASAL</shortName>
            <ecNumber evidence="3 5">4.3.2.1</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Arginosuccinase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8" type="primary">argH1</name>
        <name evidence="5" type="synonym">argH</name>
        <name evidence="8" type="ORF">LAX5112_03721</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 5">
            <text>2-(N(omega)-L-arginino)succinate = fumarate + L-arginine</text>
            <dbReference type="Rhea" id="RHEA:24020"/>
            <dbReference type="ChEBI" id="CHEBI:29806"/>
            <dbReference type="ChEBI" id="CHEBI:32682"/>
            <dbReference type="ChEBI" id="CHEBI:57472"/>
            <dbReference type="EC" id="4.3.2.1"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 5">Amino-acid biosynthesis; L-arginine biosynthesis; L-arginine from L-ornithine and carbamoyl phosphate: step 3/3.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the lyase 1 family. Argininosuccinate lyase subfamily.</text>
    </comment>
    <dbReference type="EC" id="4.3.2.1" evidence="3 5"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ73995.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673054.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03721"/>
    <dbReference type="EnsemblBacteria" id="CTQ73995">
        <property type="protein sequence ID" value="CTQ73995"/>
        <property type="gene ID" value="LAX5112_03721"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00068">
        <property type="reaction ID" value="UER00114"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004056">
        <property type="term" value="F:argininosuccinate lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042450">
        <property type="term" value="P:arginine biosynthetic process via ornithine"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01359">
        <property type="entry name" value="Argininosuccinate_lyase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.275.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00006">
        <property type="entry name" value="Arg_succ_lyase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029419">
        <property type="entry name" value="Arg_succ_lyase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009049">
        <property type="entry name" value="Argininosuccinate_lyase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024083">
        <property type="entry name" value="Fumarase/histidase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020557">
        <property type="entry name" value="Fumarate_lyase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000362">
        <property type="entry name" value="Fumarate_lyase_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022761">
        <property type="entry name" value="Fumarate_lyase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008948">
        <property type="entry name" value="L-Aspartase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43814">
        <property type="entry name" value="PTHR43814"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14698">
        <property type="entry name" value="ASL_C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00206">
        <property type="entry name" value="Lyase_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00149">
        <property type="entry name" value="FUMRATELYASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48557">
        <property type="entry name" value="SSF48557"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00838">
        <property type="entry name" value="argH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00163">
        <property type="entry name" value="FUMARATE_LYASES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="4 5" id="KW-0055">Arginine biosynthesis</keyword>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 8" id="KW-0456">Lyase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lyase_1" evidence="6">
        <location>
            <begin position="8"/>
            <end position="302"/>
        </location>
    </feature>
    <feature type="domain" description="ASL_C2" evidence="7">
        <location>
            <begin position="365"/>
            <end position="433"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000985"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004941"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012338"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022571"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00006"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00206"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF14698"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ73995.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="461" mass="50583" checksum="423A10C69F195AF8" modified="2015-12-09" version="1">MSNRMWGGRFAEGPDAIMEEINASIDYDKKLYKQDIDGSKAHVRMLAEKDIVTRDDADKIVQGLDTILSEIENGAFKFSRGLEDIHMNIEARLAELIGPAAGRLHTARSRNDQVATDFRLWVRDTLDTLDAQLTELMQVLAEKAEIHAGDVMPGFTHLQSAQPVTFGHHLLAYVEMFARDRGRVRDARKRMNECPLGSAALAGTSFPIDRKMTAEALGFDRPTANSLDAVSDRDFVIEALGAASLTAMHLSRLAEEIVVWCSAQFGFVKLSDKFSTGSSIMPQKKNPDAAELVRAKTGRIYGSLQALLVMMKGLPLAYSKDMQEDKEQAFDGLASISLALAAMTGMMRDLEPVTKAMKKAAGSGYSTATDLADWLVRVLGLPFRDAHHVTGAIVATAVSKGIELHKVSLEEMQGVEPNITQEVFSVLSVDKSVRSRVSYGGTSPVNVRKQARRWLKELAKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AG45</accession>
    <name>A0A0M7AG45_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">3-methyl-2-oxobutanoate hydroxymethyltransferase</fullName>
            <ecNumber evidence="5">2.1.2.11</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Ketopantoate hydroxymethyltransferase</fullName>
            <shortName evidence="5">KPHMT</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5 9" type="primary">panB</name>
        <name evidence="9" type="ORF">LAX5112_03594</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>(6R)-5,10-methylene-5,6,7,8-tetrahydrofolate + 3-methyl-2-oxobutanoate + H2O = (6S)-5,6,7,8-tetrahydrofolate + 2-dehydropantoate</text>
            <dbReference type="Rhea" id="RHEA:11824"/>
            <dbReference type="ChEBI" id="CHEBI:11561"/>
            <dbReference type="ChEBI" id="CHEBI:11851"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15636"/>
            <dbReference type="ChEBI" id="CHEBI:57453"/>
            <dbReference type="EC" id="2.1.2.11"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="5 8">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="5 8">Binds 1 Mg(2+) ion per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="5">Cofactor biosynthesis; (R)-pantothenate biosynthesis; (R)-pantoate from 3-methyl-2-oxobutanoate: step 1/2.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2 5">Homodecamer; pentamer of dimers.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the PanB family.</text>
    </comment>
    <dbReference type="EC" id="2.1.2.11" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73607.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672950.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03594"/>
    <dbReference type="EnsemblBacteria" id="CTQ73607">
        <property type="protein sequence ID" value="CTQ73607"/>
        <property type="gene ID" value="LAX5112_03594"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00028">
        <property type="reaction ID" value="UER00003"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003864">
        <property type="term" value="F:3-methyl-2-oxobutanoate hydroxymethyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015940">
        <property type="term" value="P:pantothenate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd06557">
        <property type="entry name" value="KPHMT-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00156">
        <property type="entry name" value="PanB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003700">
        <property type="entry name" value="Pantoate_hydroxy_MeTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015813">
        <property type="entry name" value="Pyrv/PenolPyrv_Kinase-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040442">
        <property type="entry name" value="Pyrv_Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20881">
        <property type="entry name" value="PTHR20881"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02548">
        <property type="entry name" value="Pantoate_transf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000388">
        <property type="entry name" value="Pantoate_hydroxy_MeTrfase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51621">
        <property type="entry name" value="SSF51621"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00222">
        <property type="entry name" value="panB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 8" id="KW-0460">Magnesium</keyword>
    <keyword evidence="5 8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3 5" id="KW-0566">Pantothenate biosynthesis</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5 9" id="KW-0808">Transferase</keyword>
    <feature type="region of interest" description="Alpha-ketoisovalerate binding" evidence="5 7">
        <location>
            <begin position="49"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="5 6">
        <location>
            <position position="187"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5 8">
        <location>
            <position position="49"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5 7 8">
        <location>
            <position position="88"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5 7">
        <location>
            <position position="118"/>
        </location>
        <ligand>
            <name>3-methyl-2-oxobutanoate</name>
            <dbReference type="ChEBI" id="CHEBI:11851"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5 8">
        <location>
            <position position="120"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011424"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022655"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00156"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR000388-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR000388-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR000388-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ73607.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="269" mass="29141" checksum="8AD5B9B9BC0AAB7E" modified="2015-12-09" version="1">MSAQKQIRRISAPQIAKRKGVEPIVSLTSYHAHTAAIVDKYADFILVGDSLGMVMHGMESTVGVSLDLMIMHGKAVVRGTQRALVVVDMPFGTYEESPAEAFRNAARVMKETQCGAVKLEGGRRMAETIRFLTERGIPVMAHIGLTPQSVNVMGGFKTQGREEETWSIHEEDAKVVAEAGAFALVLEGMVEPLAAKITKQIPIPTIGIGASAECDGQILVLEDMLGLNPTPPKFVKVYGNLGGQIEAAVKSYADEVKDRSFPSEKQVYR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGR9</accession>
    <name>A0A0M7AGR9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03603</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73632.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672958.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ73632">
        <property type="protein sequence ID" value="CTQ73632"/>
        <property type="gene ID" value="LAX5112_03603"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="240"/>
            <end position="268"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73632.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="268" mass="30389" checksum="23A3BAD11F6D993D" modified="2015-12-09" version="1">MRLAIRMMRKVQESIDLIAHLRRHQVTLEGEDLEHSRDLIKAESSKAAHLAWHAGIAVGLWPDRDLAPQELDWLRTETADLDREQQGAARQVRIHNLTSDGAHSLCQRLETDLPPMPLRDIRESAYGERRAVTIGVAAPVPRFMMTVKQFRNAESLRRIAQLLDLDAVGKRMERKEILRVFHEAGIRISKRPEGIVVGFDLSGETILRTDREWIIADVETAEQMLEQWNDRLKSDATRLDHLSDNPTDPRECASHISGSGQSGEPPPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AH58</accession>
    <name>A0A0M7AH58_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative inner membrane transporter YedA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yedA_1</name>
        <name evidence="3" type="ORF">LAX5112_03383</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72954.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672789.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72954">
        <property type="protein sequence ID" value="CTQ72954"/>
        <property type="gene ID" value="LAX5112_03383"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000620">
        <property type="entry name" value="EamA_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00892">
        <property type="entry name" value="EamA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="34"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="65"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="92"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="125"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="150"/>
            <end position="169"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="181"/>
            <end position="199"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="211"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="247"/>
            <end position="263"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="269"/>
            <end position="286"/>
        </location>
    </feature>
    <feature type="domain" description="EamA" evidence="2">
        <location>
            <begin position="10"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="domain" description="EamA" evidence="2">
        <location>
            <begin position="152"/>
            <end position="286"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ72954.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="289" mass="29924" checksum="E1BDFBE82D36C3FA" modified="2015-12-09" version="1">MQARDFLLWSVLAALWGSSFLAIGVAVKDIDPAPLVFARMAIAAPVLGCVLLLRGGGFNLGIHGWIIAAIVGLSGNVLPFLLISYAEQEVNTALAALIMGIAPIITLVAAPLVHFEESLTRLKVFGALAGFGGVAVLAAPDLSAGRIGSLLPELCLVAAACCYAFTALFSRRFPYPDPLKMAAASVFVGLLALGGYMALFASEPGLPAAPVAALAAVLYLGLGPTALAALIYFYLIPRIGAARLQQVNYAVPVIGTLLGIAVLGEQPGWTAWPALGLIVFGVYLVTRPD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AH81</accession>
    <name>A0A0M7AH81_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">GDSL-like Lipase/Acylhydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03701</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ73941.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673040.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03701"/>
    <dbReference type="EnsemblBacteria" id="CTQ73941">
        <property type="protein sequence ID" value="CTQ73941"/>
        <property type="gene ID" value="LAX5112_03701"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016788">
        <property type="term" value="F:hydrolase activity, acting on ester bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013830">
        <property type="entry name" value="SGNH_hydro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036514">
        <property type="entry name" value="SGNH_hydro_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13472">
        <property type="entry name" value="Lipase_GDSL_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SGNH_hydro" evidence="1">
        <location>
            <begin position="11"/>
            <end position="193"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13472"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73941.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="220" mass="23944" checksum="85390AA7F121916F" modified="2015-12-09" version="1">MSGKDPLSVVCFGDSLTWGFVPGTKSRYGHDERWTRLLQEELGFDYYVIEEGVNGRTTVFEDPARGDKNGLEHLATVRKTHMPIDILIIMLGTNDLQDRFQMSADAIGLAMGRLLFAATQATDDVEGRAPKVLLMSPPPLGDFTGKEYAGLFSQHHSVAQSKLLAGVYQKLAGTYGVAFFDTGSVVSVSEVDAVHLEAEPQKDLAKAIAEEVRKLAKAAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AH87</accession>
    <name>A0A0M7AH87_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03725</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74007.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673057.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74007">
        <property type="protein sequence ID" value="CTQ74007"/>
        <property type="gene ID" value="LAX5112_03725"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025906">
        <property type="entry name" value="YjfB_motility"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14070">
        <property type="entry name" value="YjfB_motility"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ74007.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="65" mass="6587" checksum="782A85819F288736" modified="2015-12-09" version="1">MDSVGIANTFVAMTQAQTGQALQAEMMKMAAQQDANLVALLQQGAESLQAAAPPPGLGTQVDVSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHZ5</accession>
    <name>A0A0M7AHZ5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Lipoprotein-releasing system transmembrane protein LolE</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">lolE_2</name>
        <name evidence="11" type="ORF">LAX5112_03469</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the ABC-4 integral membrane protein family. LolC/E subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73234.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672862.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03469"/>
    <dbReference type="EnsemblBacteria" id="CTQ73234">
        <property type="protein sequence ID" value="CTQ73234"/>
        <property type="gene ID" value="LAX5112_03469"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042953">
        <property type="term" value="P:lipoprotein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003838">
        <property type="entry name" value="ABC3_permease_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011925">
        <property type="entry name" value="LolCE_TM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025857">
        <property type="entry name" value="MacB_PCD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02687">
        <property type="entry name" value="FtsX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12704">
        <property type="entry name" value="MacB_PCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02212">
        <property type="entry name" value="lolCE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="11" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8 11" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="42"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="291"/>
            <end position="315"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="335"/>
            <end position="359"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="401"/>
            <end position="420"/>
        </location>
    </feature>
    <feature type="domain" description="MacB_PCD" evidence="10">
        <location>
            <begin position="52"/>
            <end position="263"/>
        </location>
    </feature>
    <feature type="domain" description="FtsX" evidence="9">
        <location>
            <begin position="322"/>
            <end position="427"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005236"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF02687"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF12704"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ73234.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="434" mass="47040" checksum="174087A891497CC6" modified="2015-12-09" version="1">MTAVETAREGADRETAEPTRPFAPFEWMIAGRYLRSRRRETFISVIAGFSFAGIMLGVATLIIVMAVMNGFRSELLGKILGINGHMLIQPIDQPLTDYDPVAKRLEGVPEVISAIPFVEGQALVSGPAGNLGALVRGLKESDLRRIPLVANNLRAGTLDGFDAGQGVAIGSRMAQQLGITLGDNVTIISPRGSVTPMGVTPRVKAYPVTAIFEIGMSEYDSTFLFMPLPESQAYFNMDGITTGIELYVVDPDNVGTMLAAVEEAAGRPAFVTDWRQRNVTFFSALEVERNVMFIILTLIVLVAALNIISGLIMLVKDKGHDIAILRTMGATRGSIMRIFLITGASIGCVGTLAGFFLGLIVCLNIESIRQFVSWLTSTQLFDPTLYFLSKLPAEIDSGETVTVLLMALALSLLATLYPAWRAARLDPVEALRYE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AI21</accession>
    <name>A0A0M7AI21_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Ni_hydr_CYTB domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_03973</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74785.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74785">
        <property type="protein sequence ID" value="CTQ74785"/>
        <property type="gene ID" value="LAX5112_03973"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022904">
        <property type="term" value="P:respiratory electron transport chain"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011577">
        <property type="entry name" value="Cyt_b561_bac/Ni-Hgenase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016174">
        <property type="entry name" value="Di-haem_cyt_TM"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01292">
        <property type="entry name" value="Ni_hydr_CYTB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81342">
        <property type="entry name" value="SSF81342"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="45"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="86"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="137"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="domain" description="Ni_hydr_CYTB" evidence="3">
        <location>
            <begin position="10"/>
            <end position="161"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01292"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ74785.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="172" mass="18408" checksum="5157DF8E3131636B" modified="2015-12-09" version="1">MKVRAVSKNRTLHWLIAVFVALALASGYGAQQIQSFSGEFLRVHLAAGLLAGLLSLVRLAVWLVAGEQASTLARQSKGINWAAKTVHGFLRVLPVVLLVSGVGMLGLTGAAPEILSGNSLDPELLAQTPPQSLHHRAAFALLILMTGHIAAAIWHRLAERGWKLEKEPESTT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AI24</accession>
    <name>A0A0M7AI24_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF1330 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03808</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74241.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008193989.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03808"/>
    <dbReference type="EnsemblBacteria" id="CTQ74241">
        <property type="protein sequence ID" value="CTQ74241"/>
        <property type="gene ID" value="LAX5112_03808"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010753">
        <property type="entry name" value="DUF1330"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07045">
        <property type="entry name" value="DUF1330"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF1330" evidence="1">
        <location>
            <begin position="3"/>
            <end position="95"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07045"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74241.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="95" mass="10583" checksum="2CB89E1CDF7B1B0A" modified="2015-12-09" version="1">MAKGYWVARVDVRDPDGYPAYVETAKPAFERFGANFLARGGKTDAIEGQGRARNVIIEFPSFQHAVDCYNSPEYQEAVKIRQKVADGEIVIVEGM</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIV2</accession>
    <name>A0A0M7AIV2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Nucleoside triphosphate pyrophosphatase</fullName>
            <ecNumber evidence="3">3.6.1.9</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">Nucleotide pyrophosphatase</fullName>
            <shortName evidence="3">Nucleotide PPase</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="4" type="primary">maf</name>
        <name evidence="4" type="ORF">LAX5112_03780</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>a 2'-deoxyribonucleoside 5'-triphosphate + H2O = a 2'-deoxyribonucleoside 5'-phosphate + diphosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:44644"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:61560"/>
            <dbReference type="ChEBI" id="CHEBI:65317"/>
            <dbReference type="EC" id="3.6.1.9"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>a ribonucleoside 5'-triphosphate + H2O = a ribonucleoside 5'-phosphate + diphosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:23996"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:58043"/>
            <dbReference type="ChEBI" id="CHEBI:61557"/>
            <dbReference type="EC" id="3.6.1.9"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="3">
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the Maf family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="3.6.1.9" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74160.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673098.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03780"/>
    <dbReference type="EnsemblBacteria" id="CTQ74160">
        <property type="protein sequence ID" value="CTQ74160"/>
        <property type="gene ID" value="LAX5112_03780"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0036218">
        <property type="term" value="F:dTTP diphosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035529">
        <property type="term" value="F:NADH pyrophosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009117">
        <property type="term" value="P:nucleotide metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00555">
        <property type="entry name" value="Maf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.950.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00528">
        <property type="entry name" value="Maf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029001">
        <property type="entry name" value="ITPase-like_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003697">
        <property type="entry name" value="Maf-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43213">
        <property type="entry name" value="PTHR43213"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02545">
        <property type="entry name" value="Maf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006305">
        <property type="entry name" value="Maf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52972">
        <property type="entry name" value="SSF52972"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="1 3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 3" id="KW-0546">Nucleotide metabolism</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" description="Proton acceptor" evidence="3">
        <location>
            <position position="74"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023080"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00528"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ74160.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="197" mass="21178" checksum="6FC9FC8FADE469AE" modified="2015-12-09" version="1">MALVLASGSKIRAELMRNAGLTIDVDPANVDERAVEAPLLKAGFPPEDLASVLAEAKANDVSARRSGELVIGADQILAFEGERRTKPDDMEAARRQLLAFSGKTHELLSAVVISKDGEAIWRHVSTARLIMRTLSPAFVGHYLAEAGDDVLSSVGAYQLEGLGLQLFEKIDGDYFTILGLPMLPLLAQLRELGVIEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJ99</accession>
    <name>A0A0M7AJ99_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Ribonuclease I</fullName>
            <ecNumber evidence="4">3.1.27.6</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">rna</name>
        <name evidence="4" type="ORF">LAX5112_04156</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the RNase T2 family.</text>
    </comment>
    <dbReference type="EC" id="3.1.27.6" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75235.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04156"/>
    <dbReference type="EnsemblBacteria" id="CTQ75235">
        <property type="protein sequence ID" value="CTQ75235"/>
        <property type="gene ID" value="LAX5112_04156"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033897">
        <property type="term" value="F:ribonuclease T2 activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.730.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001568">
        <property type="entry name" value="RNase_T2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036430">
        <property type="entry name" value="RNase_T2-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018188">
        <property type="entry name" value="RNase_T2_His_AS_1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11240">
        <property type="entry name" value="PTHR11240"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00445">
        <property type="entry name" value="Ribonuclease_T2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55895">
        <property type="entry name" value="SSF55895"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00530">
        <property type="entry name" value="RNASE_T2_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809486" evidence="3">
        <location>
            <begin position="23"/>
            <end position="338"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007469"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU004328"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ75235.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="338" mass="36327" checksum="8D269137E2074E29" modified="2015-12-09" version="1">MRRIVFACVVLGLTLTPAAAFKKLEGYFIAEQACEAYQSKNRQTNPGNVLTSPRIAYDIKGINKQGGDYFQIQVDDAPVTQLRWVSTSCGVHVIVAGTVTVDPVVDPGITPVTGGQESTDNLLTLSWQPAFCEIRPGKQECQDLNSGNLPHTTRQLSIHGLWPQPKGNDYCGVSASVRNLDKPGNWHLLPAPEIDTETADALAAAMPGFASFLHYHEWIKHGTCYFGDGGADEYYDDTLYLTGLVNDSAVGDLFFNNVGRQVSGAQIRAAFDGAFGVGTGARVLIKCTNDGGRTLINEIWLSLKGQITPTSDLGELMLAANETGMGCTDGLIDPTGLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="34" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AK12</accession>
    <name>A0A0M7AK12_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Glycerol-3-phosphate dehydrogenase [NAD(P)+]</fullName>
            <ecNumber evidence="7">1.1.1.94</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">NAD(P)H-dependent glycerol-3-phosphate dehydrogenase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7 16" type="primary">gpsA</name>
        <name evidence="16" type="ORF">LAX5112_03972</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="17" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>NAD(+) + sn-glycerol 3-phosphate = dihydroxyacetone phosphate + H(+) + NADH</text>
            <dbReference type="Rhea" id="RHEA:11092"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57597"/>
            <dbReference type="ChEBI" id="CHEBI:57642"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="EC" id="1.1.1.94"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7 12">
            <text>NADP(+) + sn-glycerol 3-phosphate = dihydroxyacetone phosphate + H(+) + NADPH</text>
            <dbReference type="Rhea" id="RHEA:11096"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57597"/>
            <dbReference type="ChEBI" id="CHEBI:57642"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="EC" id="1.1.1.94"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="7 13">Membrane lipid metabolism; glycerophospholipid metabolism.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7 13">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 7 11">Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.94" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74782.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008195662.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03972"/>
    <dbReference type="EnsemblBacteria" id="CTQ74782">
        <property type="protein sequence ID" value="CTQ74782"/>
        <property type="gene ID" value="LAX5112_03972"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00940"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009331">
        <property type="term" value="C:glycerol-3-phosphate dehydrogenase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004367">
        <property type="term" value="F:glycerol-3-phosphate dehydrogenase [NAD+] activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046167">
        <property type="term" value="P:glycerol-3-phosphate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046168">
        <property type="term" value="P:glycerol-3-phosphate catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006650">
        <property type="term" value="P:glycerophospholipid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008654">
        <property type="term" value="P:phospholipid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1040.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00394">
        <property type="entry name" value="NAD_Glyc3P_dehydrog"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008927">
        <property type="entry name" value="6-PGluconate_DH-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013328">
        <property type="entry name" value="6PGD_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006168">
        <property type="entry name" value="G3P_DH_NAD-dep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006109">
        <property type="entry name" value="G3P_DH_NAD-dep_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011128">
        <property type="entry name" value="G3P_DH_NAD-dep_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07479">
        <property type="entry name" value="NAD_Gly3P_dh_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01210">
        <property type="entry name" value="NAD_Gly3P_dh_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000114">
        <property type="entry name" value="Glycerol-3-P_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00077">
        <property type="entry name" value="GPDHDRGNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48179">
        <property type="entry name" value="SSF48179"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00957">
        <property type="entry name" value="NAD_G3PDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2 7" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="4 7" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="7 10 11" id="KW-0520">NAD</keyword>
    <keyword evidence="3 7 11" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5 7 13" id="KW-0594">Phospholipid biosynthesis</keyword>
    <keyword evidence="6 7" id="KW-1208">Phospholipid metabolism</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NAD_Gly3P_dh_N" evidence="14">
        <location>
            <begin position="6"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="domain" description="NAD_Gly3P_dh_C" evidence="15">
        <location>
            <begin position="180"/>
            <end position="320"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="7 9">
        <location>
            <begin position="255"/>
            <end position="256"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="7 8">
        <location>
            <position position="191"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7 10">
        <location>
            <begin position="11"/>
            <end position="16"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7 9">
        <location>
            <position position="108"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7 10">
        <location>
            <position position="140"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7 10">
        <location>
            <position position="255"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="278"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="281"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00011009"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023209"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023264"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00394"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR000114-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR000114-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR000114-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU000437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU000439"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU004280"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF01210"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="Pfam" id="PF07479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="CTQ74782.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="335" mass="34484" checksum="D76126E67D97D86F" modified="2015-12-09" version="1">MGAVKSIGVIGGGAWGTALALTAARAGTTVRLWARDPATVSEVRTKQQNTKYLPGITFDEDLNATSSLKEVADADAILLVTPAQSTRAILSALKETGNVRGPVVLCAKGIEQTTGKLLSQVMKEELPGIEPGVLSGPSFADDVAKGLPTAVTVAAHTAKTALSLCEALQSPCFRPYASIDVLGTQIGGALKNVLAIACGAVAGRKLGASAQAALTARGFAELNRLGSAMGAQGETLTGLSGLGDLVLTCSSTQSRNFSFGMRLGEGFMASELIAAGGKLAEGAYSAQVAVKLAQKHEIEVPICDTVARMVSEDMTIDEALNTLMARPLKSETDFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AK39</accession>
    <name>A0A0M7AK39_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uroporphyrinogen-III synthase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03966</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74766.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03966"/>
    <dbReference type="EnsemblBacteria" id="CTQ74766">
        <property type="protein sequence ID" value="CTQ74766"/>
        <property type="gene ID" value="LAX5112_03966"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004852">
        <property type="term" value="F:uroporphyrinogen-III synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033014">
        <property type="term" value="P:tetrapyrrole biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06578">
        <property type="entry name" value="HemD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10090">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036108">
        <property type="entry name" value="4pyrrol_syn_uPrphyn_synt_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003754">
        <property type="entry name" value="4pyrrol_synth_uPrphyn_synth"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02602">
        <property type="entry name" value="HEM4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69618">
        <property type="entry name" value="SSF69618"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HEM4" evidence="1">
        <location>
            <begin position="16"/>
            <end position="202"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02602"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74766.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="209" mass="22526" checksum="0F3F8FBEFA7067AB" modified="2015-12-09" version="1">MPLLHFRPCPPPCFDLSSIDALAVTSRRAVDAITHHAQLTQLTSLPAFTVGNKTAAACREAGFEDVRSADSDVAGLANLILSSAGSDLRKVLYLSAEQRSGDLGRLLEKGGITCRTLPVYRMEPVQDLPKTVFARLANGDYAGVLVFSRRTGETLARLFTAHLPEHIFSDLPVYAISGQAAEGFQGFNDVHIASAPREDALFDLLLAEC</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALA2</accession>
    <name>A0A0M7ALA2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Transglycosylase SLT domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_04085</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the virb1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ75010.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04085"/>
    <dbReference type="EnsemblBacteria" id="CTQ75010">
        <property type="protein sequence ID" value="CTQ75010"/>
        <property type="gene ID" value="LAX5112_04085"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023346">
        <property type="entry name" value="Lysozyme-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008258">
        <property type="entry name" value="Transglycosylase_SLT_dom_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01464">
        <property type="entry name" value="SLT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53955">
        <property type="entry name" value="SSF53955"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809574" evidence="2">
        <location>
            <begin position="28"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="domain" description="SLT" evidence="3">
        <location>
            <begin position="39"/>
            <end position="167"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009387"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ75010.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="192" mass="21396" checksum="ACCB6B504764A4DA" modified="2015-12-09" version="1">MKTALATAFLTASICSAVILRPIPAFAEIQNVCEREMVAASRKYQVPLGILYAVGLTETGRRNSLYPHALNIEGKSVFPPSRTAARRDIEAARKNGKKLIDIGCMQINHHYHSDQFRSVDHMLDPRANVQYAARFLKELRGRQGSWTMAVARYHAGPNNDPAQKRYVCTVIRNMVASGFGNWTRNSKAFCGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALC1</accession>
    <name>A0A0M7ALC1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 12">Flagellar biosynthetic protein FliP</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="primary">fliP_2</name>
        <name evidence="12" type="synonym">fliP</name>
        <name evidence="14" type="ORF">LAX5112_04092</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="12">Plays a role in the flagellum-specific transport system.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="12">Cell membrane</location>
            <topology evidence="12">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="12">Bacterial flagellum basal body</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 12">Belongs to the FliP/MopC/SpaP family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ75030.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04092"/>
    <dbReference type="EnsemblBacteria" id="CTQ75030">
        <property type="protein sequence ID" value="CTQ75030"/>
        <property type="gene ID" value="LAX5112_04092"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009425">
        <property type="term" value="C:bacterial-type flagellum basal body"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044781">
        <property type="term" value="P:bacterial-type flagellum organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009306">
        <property type="term" value="P:protein secretion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005837">
        <property type="entry name" value="FliP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005838">
        <property type="entry name" value="T3SS_IM_P"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30587">
        <property type="entry name" value="PTHR30587"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30587:SF0">
        <property type="entry name" value="PTHR30587:SF0"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00813">
        <property type="entry name" value="FliP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00951">
        <property type="entry name" value="FLGBIOSNFLIP"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01302">
        <property type="entry name" value="TYPE3IMPPROT"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01103">
        <property type="entry name" value="fliP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01060">
        <property type="entry name" value="FLIP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0975">Bacterial flagellum</keyword>
    <keyword evidence="7 12" id="KW-1005">Bacterial flagellum biogenesis</keyword>
    <keyword evidence="11 12" id="KW-1006">Bacterial flagellum protein export</keyword>
    <keyword evidence="5 12" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="14" id="KW-0966">Cell projection</keyword>
    <keyword evidence="14" id="KW-0969">Cilium</keyword>
    <keyword evidence="14" id="KW-0282">Flagellum</keyword>
    <keyword evidence="9 12" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-0653">Protein transport</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="13" id="KW-0732">Signal</keyword>
    <keyword evidence="6 12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8 12" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4 12" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="13">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809433" description="Flagellar biosynthetic protein FliP" evidence="13">
        <location>
            <begin position="21"/>
            <end position="247"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="43"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="85"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="188"/>
            <end position="210"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="222"/>
            <end position="243"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006257"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00021714"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022795"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023143"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023225"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU362069"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="CTQ75030.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="247" mass="27181" checksum="A868B989CB835206" modified="2015-12-09" version="1">MMRLFLTVAALLALTGAAAAQVPDLSALLPEGEGSASGRVIQMIILLTVLSLAPGILIMVTSFIRFVIAFSFLRSGIGLQTTPGNLILISLALFMTFYVMAPTFDRAWEDGVRPLMNNEITEEEAYVKITEPFREFMLSQVREKDLVLFDDLAAGRVTDGSADSAEEVELRVLIPAFMISELRRGFEIGFLIALPFLVIDMIVATITMSMGMMMLPPTVISLPFKALFFILIDGWNLLVGSLVRSFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMB1</accession>
    <name>A0A0M7AMB1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">LAX5112_04286</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000022">
        <property type="protein sequence ID" value="CTQ75566.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673558.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000022.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04286"/>
    <dbReference type="EnsemblBacteria" id="CTQ75566">
        <property type="protein sequence ID" value="CTQ75566"/>
        <property type="gene ID" value="LAX5112_04286"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007387">
        <property type="entry name" value="TRAP_DctQ"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35011">
        <property type="entry name" value="PTHR35011"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04290">
        <property type="entry name" value="DctQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="47"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="85"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="128"/>
            <end position="151"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ75566.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="174" mass="18818" checksum="52CA37E27A6DA1BD" modified="2015-12-09" version="1">MTALTRGVDFVLRLVITSAFAVLVVCVVWQVFSRYVLESPSTVTDEMARFLFIWVALLGGAYTLGQRRHLAIDLLPVVTTGKARFAVNAGIIGAIALFASLIMIYGGLGLVSRTLETGQVSPALRIPMGFIYVAIPFSGFCILYYCLTFFADLVRDGRGPNEQLEPPAPGGPLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AME0</accession>
    <name>A0A0M7AME0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">(3R)-hydroxyacyl-ACP dehydratase subunit HadB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_04452</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ76059.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673658.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000024.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04452"/>
    <dbReference type="EnsemblBacteria" id="CTQ76059">
        <property type="protein sequence ID" value="CTQ76059"/>
        <property type="gene ID" value="LAX5112_04452"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029069">
        <property type="entry name" value="HotDog_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039569">
        <property type="entry name" value="MaoC-like_dehydrat_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002539">
        <property type="entry name" value="MaoC-like_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13452">
        <property type="entry name" value="MaoC_dehydrat_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01575">
        <property type="entry name" value="MaoC_dehydratas"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54637">
        <property type="entry name" value="SSF54637"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MaoC_dehydrat_N" evidence="3">
        <location>
            <begin position="53"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="domain" description="MaoC-like" evidence="2">
        <location>
            <begin position="165"/>
            <end position="277"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="147"/>
            <end position="166"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01575"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF13452"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ76059.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="286" mass="31306" checksum="641FDE9D06AEF63A" modified="2015-12-09" version="1">MAIDYDKLMDWPFEEVEQTYSIKDSIVYALGVGYGHDPVDEGQLPFVFEEADFKAVPTMAVVLAGPGFWLRDPETGIDWRKILHGEQGIRWHKPLPKSTTVTARTRITRILDKGADKGALIYSERDLVDKSTGDKLATLSSTTFARGDGGFGGATGPQPQPHEVPERDPCAVCDLPTRPHAALLYRLSGDPNPLHADPKVAAAAGFKAPILHGLCTLGIAGHAVLRSFCGYDTTRLKSLKLRFSSPVYPGETIRTEMWQDGDVISFRSKVLERDTVVLNNGCVELG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AME1</accession>
    <name>A0A0M7AME1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">braC_9</name>
        <name evidence="3" type="ORF">LAX5112_04296</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000022">
        <property type="protein sequence ID" value="CTQ75596.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008189246.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000022.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04296"/>
    <dbReference type="EnsemblBacteria" id="CTQ75596">
        <property type="protein sequence ID" value="CTQ75596"/>
        <property type="gene ID" value="LAX5112_04296"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028081">
        <property type="entry name" value="Leu-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13458">
        <property type="entry name" value="Peripla_BP_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809467" evidence="1">
        <location>
            <begin position="22"/>
            <end position="378"/>
        </location>
    </feature>
    <feature type="domain" description="Peripla_BP_6" evidence="2">
        <location>
            <begin position="23"/>
            <end position="352"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13458"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ75596.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="378" mass="40388" checksum="48D4458840E8B565" modified="2015-12-09" version="1">MKQTLLAAVAALSLGVAAASAEPVKVGMITTLSGGGAGLGIDVRDGFMLAVKQSGNEDIEVIIEDDQRKPDVAVKLADKLVQAENVDVLTGLIWSNLAMAVIPSVTAQGKFYLSPNAGPSMLAGKGCHPNYFNVAWQNDNLHEAAGAFANVEGYKNSFILAPNYPAGKDALTGYQRLYKGDLAGELYTKLGQTDYAAELAQIRASGADSVYFFLPGGMGISFLKQYAGSGIDLPVVGPAFSFDQGILQAVGDAALGVRNTSQWSKDINTPVNNAFVESFQAEYGRLPSLYASQGFDTANLLLSAMAKADVKDADAFREALREADFKSTRGEFRFGPNNHPIQDIYVREVIKEGDVFTNKIIGKALNSHSDAYWSECNM</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMK2</accession>
    <name>A0A0M7AMK2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">AB hydrolase superfamily protein YvaM</fullName>
            <ecNumber evidence="2">3.-.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yvaM</name>
        <name evidence="2" type="ORF">LAX5112_04571</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.-.-.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000026">
        <property type="protein sequence ID" value="CTQ76368.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673765.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000026.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04571"/>
    <dbReference type="EnsemblBacteria" id="CTQ76368">
        <property type="protein sequence ID" value="CTQ76368"/>
        <property type="gene ID" value="LAX5112_04571"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000073">
        <property type="entry name" value="AB_hydrolase_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12697">
        <property type="entry name" value="Abhydrolase_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AB hydrolase-1" evidence="1">
        <location>
            <begin position="25"/>
            <end position="248"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12697"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76368.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="259" mass="27657" checksum="E8B8853B76A6FAEE" modified="2015-12-09" version="1">MIWTTRPRFDQGGLAFIKEGEGSCVLLLHGVGSQADAWAAQVLHLAARFMVIAPDMPGHGQSTHLAGPASLSAYSDAVARLLDGPTVVVGHSMGAMIALDIAARYPEMIEGVAALNAIYRRSDAAKQAVLHRAESLGSEAVPNPEPTLDRWFGSEPSEARSACEAWLRAADRKGYQAAYEVFAREDGPSDRALTSLKCPAYFMTGGLEPNSTPAMSQAMAALAPNGRVQVIKDAAHMMPMTHHDEVTRALMAFATECHS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMZ1</accession>
    <name>A0A0M7AMZ1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Bacterial extracellular solute-binding proteins, family 3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_04361</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75792.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04361"/>
    <dbReference type="EnsemblBacteria" id="CTQ75792">
        <property type="protein sequence ID" value="CTQ75792"/>
        <property type="gene ID" value="LAX5112_04361"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809479" evidence="2">
        <location>
            <begin position="34"/>
            <end position="265"/>
        </location>
    </feature>
    <feature type="domain" description="PBPb" evidence="3">
        <location>
            <begin position="42"/>
            <end position="264"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00497"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ75792.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="265" mass="29588" checksum="F4DA5EC57BF5AD9E" modified="2015-12-09" version="1">MLVLHCRRSGRNLFRALICGLGFLLATLPPALAADQVLFLQDNAYAPYMTVENGMPAGLYAEILFEAQRRMDASNLSVQAVPWTRATVLVENGYAQGLVGSYYKPTDRPWIRHWSVPIFFEEVSIFCRSGIAQPGWIYPDDYKGLLFGNVAGYKAPGDRFFELVEQGVIKLEEAQTTEQNLDKLALGRIDCYVVERIATEVLIREKNIKNVRIEGTASLEAAYIGYSDKWTGPNADAFIKAMDETLTDMKADGTIDRIIAKFIGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQ85</accession>
    <name>A0A0M7AQ85_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Luminescence regulatory protein LuxO</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">luxO_2</name>
        <name evidence="11" type="ORF">LAX5112_04864</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000033">
        <property type="protein sequence ID" value="CTQ77295.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674012.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000033.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04864"/>
    <dbReference type="EnsemblBacteria" id="CTQ77295">
        <property type="protein sequence ID" value="CTQ77295"/>
        <property type="gene ID" value="LAX5112_04864"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002197">
        <property type="entry name" value="HTH_Fis"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002078">
        <property type="entry name" value="Sigma_54_int"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025943">
        <property type="entry name" value="Sigma_54_int_dom_ATP-bd_2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02954">
        <property type="entry name" value="HTH_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00158">
        <property type="entry name" value="Sigma54_activat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00676">
        <property type="entry name" value="SIGMA54_INTERACT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50045">
        <property type="entry name" value="SIGMA54_INTERACT_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0010">Activator</keyword>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0804">Transcription</keyword>
    <keyword evidence="4" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="3" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="domain" description="Response regulatory" evidence="10">
        <location>
            <begin position="2"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="domain" description="Sigma-54 factor interaction" evidence="9">
        <location>
            <begin position="140"/>
            <end position="369"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="475"/>
            <end position="495"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="7">
        <location>
            <position position="51"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023159"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50045"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ77295.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="495" mass="53342" checksum="BE317AABAE8A7A70" modified="2015-12-09" version="1">MKVLIVEDTLSLATVYEHHLSRAGIETTHVETGQAALSKIRKGGISVVLLDLQLPDMNGLEVLATVREEQLPVTVVVVTSSGSIKTAVDAMQAGAYDFIVKPVAEERLITTTRNALERETLTEVVAEVRKPSGGKANHGFVGSSLPMTAVYKMIESVARSNASVFITGESGTGKEVCAEAIHKSSPRAKKPFVPLNCAAIPKDLIESEIFGHVKGAFTGATGDRDGAAARADGGTLFLDEICELELSLQAKLLRFLQSGTVQKVGSDKLTKVDVRIVCATNRDPQEEVEAGRFREDLYYRLHVLPIGLPPLRARGADILELARHFLTKFGSEEGKTFEGFSVEAEELLMRHPWPGNVREMQNTVRNLVVLNEGPIVEVDMLATLQGRQPSAPKPAQTVPLSVPQAASPASTVVSDTGDVWPQITLSLGQPFEMLERSIIEATIDACGGSLPKTARVLQVSPSTLYRKKEIWAAQDGDDTSVVGSEPDEDDMAVNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQF7</accession>
    <name>A0A0M7AQF7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Arylsulfatase</fullName>
            <ecNumber evidence="4">3.1.6.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">atsA_3</name>
        <name evidence="4" type="ORF">LAX5112_04668</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="PTM">
        <text evidence="1">The conversion to 3-oxoalanine (also known as C-formylglycine, FGly), of a serine or cysteine residue in prokaryotes and of a cysteine residue in eukaryotes, is critical for catalytic activity.</text>
    </comment>
    <dbReference type="EC" id="3.1.6.1" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000028">
        <property type="protein sequence ID" value="CTQ76672.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673852.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000028.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04668"/>
    <dbReference type="EnsemblBacteria" id="CTQ76672">
        <property type="protein sequence ID" value="CTQ76672"/>
        <property type="gene ID" value="LAX5112_04668"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004065">
        <property type="term" value="F:arylsulfatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017850">
        <property type="entry name" value="Alkaline_phosphatase_core_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000917">
        <property type="entry name" value="Sulfatase_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00884">
        <property type="entry name" value="Sulfatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53649">
        <property type="entry name" value="SSF53649"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809849" evidence="2">
        <location>
            <begin position="33"/>
            <end position="514"/>
        </location>
    </feature>
    <feature type="domain" description="Sulfatase" evidence="3">
        <location>
            <begin position="36"/>
            <end position="361"/>
        </location>
    </feature>
    <feature type="modified residue" description="3-oxoalanine (Cys)" evidence="1">
        <location>
            <position position="85"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRSR" id="PIRSR600917-51"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ76672.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="514" mass="58514" checksum="8A451A8113F403D5" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQH9</accession>
    <name>A0A0M7AQH9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Ubiquinol oxidase subunit 2</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="primary">cyoA</name>
        <name evidence="14" type="ORF">LAX5112_04377</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="10">Cell membrane</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 10">Belongs to the cytochrome c oxidase subunit 2 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75834.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04377"/>
    <dbReference type="EnsemblBacteria" id="CTQ75834">
        <property type="protein sequence ID" value="CTQ75834"/>
        <property type="gene ID" value="LAX5112_04377"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070469">
        <property type="term" value="C:respirasome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005507">
        <property type="term" value="F:copper ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009486">
        <property type="term" value="F:cytochrome bo3 ubiquinol oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004129">
        <property type="term" value="F:cytochrome-c oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016682">
        <property type="term" value="F:oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd04212">
        <property type="entry name" value="CuRO_UO_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.90">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.420">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045187">
        <property type="entry name" value="CcO_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002429">
        <property type="entry name" value="CcO_II-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010514">
        <property type="entry name" value="COX_ARM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008972">
        <property type="entry name" value="Cupredoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034227">
        <property type="entry name" value="CuRO_UO_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011759">
        <property type="entry name" value="Cyt_c_oxidase_su2_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036257">
        <property type="entry name" value="Cyt_c_oxidase_su2_TM_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006333">
        <property type="entry name" value="Cyt_o_ubiquinol_oxidase_su2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22888">
        <property type="entry name" value="PTHR22888"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06481">
        <property type="entry name" value="COX_ARM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000292">
        <property type="entry name" value="Ubi_od_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49503">
        <property type="entry name" value="SSF49503"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81464">
        <property type="entry name" value="SSF81464"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01433">
        <property type="entry name" value="CyoA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50857">
        <property type="entry name" value="COX2_CUA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50999">
        <property type="entry name" value="COX2_TM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 10" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7 10" id="KW-0249">Electron transport</keyword>
    <keyword evidence="9 10 11" id="KW-0472">Membrane</keyword>
    <keyword evidence="10 14" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 10" id="KW-0679">Respiratory chain</keyword>
    <keyword evidence="6 11" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8 11" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3 10" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="14"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="48"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="92"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="domain" description="COX2_TM" evidence="13">
        <location>
            <begin position="26"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="domain" description="COX2_CUA" evidence="12">
        <location>
            <begin position="130"/>
            <end position="242"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007866"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022660"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRNR" id="PIRNR000292"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS50999"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="CTQ75834.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="305" mass="33428" checksum="D5E535B4B959BD65" modified="2015-12-09" version="1">MIGSGTPLHWVRQLGAAAAIAVLVSGCALSEAPILYPQGPIALAQRDLLFTAFWLMMIVAIPAILLTLLFVYRYRSRHHSTAAYTPEWEGSWKIETVVWLVPAAIIIVLGTLVWRDTHKLDPYKELASDKPPFEVQAIALDWKWLFVYPELGVASVNELAFPADRPLSIKITSDTVMNSLMIPALGGQIYAMAGMRTEMNLLADGPGTFKGRNTMYSGDGFSDQHFLAHALTEADFTAWKEKVTGSPDALDAKTYLEVTKQSVANPVAYYSSVEPNLFGLILRKYAPIVGPLESKAAELICRGAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQJ4</accession>
    <name>A0A0M7AQJ4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Phosphoenolpyruvate--protein phosphotransferase</fullName>
            <ecNumber evidence="5">2.7.3.9</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">ptsI</name>
        <name evidence="12" type="ORF">LAX5112_04826</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>L-histidyl-[protein] + phosphoenolpyruvate = N(pros)-phospho-L-histidyl-[protein] + pyruvate</text>
            <dbReference type="Rhea" id="RHEA:23880"/>
            <dbReference type="Rhea" id="RHEA-COMP:9745"/>
            <dbReference type="Rhea" id="RHEA-COMP:9746"/>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
            <dbReference type="ChEBI" id="CHEBI:29979"/>
            <dbReference type="ChEBI" id="CHEBI:58702"/>
            <dbReference type="ChEBI" id="CHEBI:64837"/>
            <dbReference type="EC" id="2.7.3.9"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the PEP-utilizing enzyme family.</text>
    </comment>
    <dbReference type="EC" id="2.7.3.9" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000032">
        <property type="protein sequence ID" value="CTQ77179.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04826"/>
    <dbReference type="EnsemblBacteria" id="CTQ77179">
        <property type="protein sequence ID" value="CTQ77179"/>
        <property type="gene ID" value="LAX5112_04826"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008965">
        <property type="term" value="F:phosphoenolpyruvate-protein phosphotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009401">
        <property type="term" value="P:phosphoenolpyruvate-dependent sugar phosphotransferase system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.274.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.450.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003018">
        <property type="entry name" value="GAF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029016">
        <property type="entry name" value="GAF-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008279">
        <property type="entry name" value="PEP-util_enz_mobile_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000121">
        <property type="entry name" value="PEP_util_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036637">
        <property type="entry name" value="Phosphohistidine_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006318">
        <property type="entry name" value="PTS_EI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008731">
        <property type="entry name" value="PTS_EIN"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036618">
        <property type="entry name" value="PtsI_HPr-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015813">
        <property type="entry name" value="Pyrv/PenolPyrv_Kinase-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040442">
        <property type="entry name" value="Pyrv_Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01590">
        <property type="entry name" value="GAF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05524">
        <property type="entry name" value="PEP-utilisers_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00391">
        <property type="entry name" value="PEP-utilizers"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02896">
        <property type="entry name" value="PEP-utilizers_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00065">
        <property type="entry name" value="GAF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47831">
        <property type="entry name" value="SSF47831"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51621">
        <property type="entry name" value="SSF51621"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52009">
        <property type="entry name" value="SSF52009"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01417">
        <property type="entry name" value="PTS_I_fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-0598">Phosphotransferase system</keyword>
    <keyword evidence="12" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0762">Sugar transport</keyword>
    <keyword evidence="12" id="KW-0808">Transferase</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="domain" description="GAF" evidence="11">
        <location>
            <begin position="14"/>
            <end position="160"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000683"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00007837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012232"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022597"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022683"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="SMART" id="SM00065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ77179.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="745" mass="81665" checksum="1746D12261825B5A" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AR95</accession>
    <name>A0A0M7AR95_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Flp pilus assembly protein TadG</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04468</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ76104.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673671.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000024.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76104">
        <property type="protein sequence ID" value="CTQ76104"/>
        <property type="gene ID" value="LAX5112_04468"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012495">
        <property type="entry name" value="TadE"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07811">
        <property type="entry name" value="TadE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="41"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76104.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="187" mass="21111" checksum="FF9E7965B9AC70E3" modified="2015-12-09" version="1">MQLPSTRLRKFRTDTNGVAAVEFALIFPLLILIFLNTASLFDGFRASRQLERAASVTTDLVTRFNGVEFTEDDFDLIEATAVSILGNYATNSNFTMTVSSVRNFFDDEDELEVHWSESNDDDALLEDDDLAQFDFPTLAEGDTVIVVQLSLEHSALFVSDIVGDFSLNDFHIRRPRFKTEIVHEDDS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARH5</accession>
    <name>A0A0M7ARH5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Linear gramicidin synthase subunit B</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">lgrB</name>
        <name evidence="6" type="ORF">LAX5112_04787</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000030">
        <property type="protein sequence ID" value="CTQ77042.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04787"/>
    <dbReference type="EnsemblBacteria" id="CTQ77042">
        <property type="protein sequence ID" value="CTQ77042"/>
        <property type="gene ID" value="LAX5112_04787"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031177">
        <property type="term" value="F:phosphopantetheine binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1200.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12780">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036736">
        <property type="entry name" value="ACP-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025110">
        <property type="entry name" value="AMP-bd_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045851">
        <property type="entry name" value="AMP-bd_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042099">
        <property type="entry name" value="ANL_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020806">
        <property type="entry name" value="PKS_PP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009081">
        <property type="entry name" value="PP-bd_ACP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13193">
        <property type="entry name" value="AMP-binding_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00550">
        <property type="entry name" value="PP-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00823">
        <property type="entry name" value="PKS_PP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47336">
        <property type="entry name" value="SSF47336"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50075">
        <property type="entry name" value="CARRIER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0007">Acetylation</keyword>
    <keyword evidence="1 4" id="KW-0596">Phosphopantetheine</keyword>
    <keyword evidence="2" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Carrier" evidence="5">
        <location>
            <begin position="134"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="modified residue" description="O-(pantetheine 4'-phosphoryl)serine" evidence="4">
        <location>
            <position position="169"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022450"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022990"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00258"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50075"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ77042.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="241" mass="26399" checksum="0FC967A71A26966E" modified="2015-12-09" version="1">MYRTGDLVCRLEDGRLQFLGRTDHQVKVRGYRIELGEIESRIATHPGVIETVVTAREDRADDVRLVAYVRTRSGSLDEDVLRSELQDSLPEYMVPAHFVVLEAFPLTPNAKIDRKALPAPDAAVRETAQSAFVAPESDMQKSVADAYQRILGLSQVGQNDNFFNLGGHSLLAVQLHRDLKASVAPNLTITDIFRFPTVGGLAGHLTDGGRADDRLGEVASRAAKRRAALSARRQALSGNRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AS81</accession>
    <name>A0A0M7AS81_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04866</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000033">
        <property type="protein sequence ID" value="CTQ77302.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674014.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000033.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77302">
        <property type="protein sequence ID" value="CTQ77302"/>
        <property type="gene ID" value="LAX5112_04866"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1240.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043169">
        <property type="entry name" value="PMM_cap"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77302.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="280" mass="30967" checksum="BDC80B4226FE9D76" modified="2015-12-09" version="1">MFPQAVFAPVGQVTGPIGWTDPVPVNDVYLFDLDALVPSPKGQMDLDFARYLSAFARKRACYILSNTSITDMMTRIPASVRAACAGLFAAGGTELWVGEDLVVQHEHEFSDDLYEFMVKVVQKSTYPDKQAPMLESGSASLRLCIAGYQSTLRQMKDYAAWEEEHSELATITHEFKARFPDHDVYRDTDTSLMIVPRTFSSALVVSHLLKRHKNARLIGYVTLQAAGSYANPLCDAFGSADVLSTIKGPGDVSQLLSYEFRRLTQQEAAVNERAGKLVEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASR4</accession>
    <name>A0A0M7ASR4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative zinc finger/helix-turn-helix protein, YgiT family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04716</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000029">
        <property type="protein sequence ID" value="CTQ76823.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76823">
        <property type="protein sequence ID" value="CTQ76823"/>
        <property type="gene ID" value="LAX5112_04716"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01381">
        <property type="entry name" value="HTH_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00530">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="1">
        <location>
            <begin position="6"/>
            <end position="39"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76823.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="81" mass="9140" checksum="A48E90DB92211FF2" modified="2015-12-09" version="1">MTPEQFRSWRRTLGLKQKDAAELLGLKKRMIQYYEKGNRDGRPVEIPKSIRLACYALSQGIADFDGVTTTDAPPSKDKPDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASV7</accession>
    <name>A0A0M7ASV7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_05031</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000044">
        <property type="protein sequence ID" value="CTQ77727.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77727">
        <property type="protein sequence ID" value="CTQ77727"/>
        <property type="gene ID" value="LAX5112_05031"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ77727.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="304" mass="33172" checksum="5265E6263BFF6E3A" modified="2015-12-09" version="1">MHGETERGVQFVLAHLDRFQMFQKRWTGEPVHVPALGRDIVTKAGGHRDCHQAFKVKAAGEGLKILPDFVKALFGVIDEIDLVHRQHHMADAEQRGNEGMAAGLYLQAMAGIDEKHGKIGSRGAGCHVAGVLFVARCVGHDELALVGGKEAVGHINGDALLALCFQPVDQERQIDVFADRAVFLRVPLKGCQLILEDQLGVIEQTADQRRLAVIHRAAGQEPQLVLLLLGRHIGGNSLRTCQRAVLGVFKNAHQKYPSRFFFSIEALSSLSIRRPWRSDVRAISISLTMPGKVVASDSIAPVSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASX3</accession>
    <name>A0A0M7ASX3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_04933</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000036">
        <property type="protein sequence ID" value="CTQ77516.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674076.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000036.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04933"/>
    <dbReference type="EnsemblBacteria" id="CTQ77516">
        <property type="protein sequence ID" value="CTQ77516"/>
        <property type="gene ID" value="LAX5112_04933"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.600">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1610">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010621">
        <property type="entry name" value="DUF1214"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037049">
        <property type="entry name" value="DUF1214_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010679">
        <property type="entry name" value="DUF1254"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037050">
        <property type="entry name" value="DUF1254_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06742">
        <property type="entry name" value="DUF1214"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06863">
        <property type="entry name" value="DUF1254"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809590" evidence="1">
        <location>
            <begin position="24"/>
            <end position="504"/>
        </location>
    </feature>
    <feature type="domain" description="DUF1254" evidence="3">
        <location>
            <begin position="111"/>
            <end position="226"/>
        </location>
    </feature>
    <feature type="domain" description="DUF1214" evidence="2">
        <location>
            <begin position="379"/>
            <end position="485"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF06742"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF06863"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ77516.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="504" mass="56247" checksum="1079EBEFE21DEBBF" modified="2015-12-09" version="1">MLRSIGTAAAAAIIASLALPALAQDSFKDLALPEVWQGEKETVFGPMQFDHGMPLRESAEMLYDKLDAYRATELFLWSQPIVSFAIWRDQAREKHENFQNRSTLHVKTYDDRVGVLTINQSSEYFFSFVNTDEDATVIEIPPGIVVGLVTDFWQRGLTDLGVFSLNAGSGGTYVLSGPNTPKDKIPDIKGATVLSSETSNAFILMRFIRIEDQTPVEELQAAVKIYAASEEPGLDLVPGGDKPLQGYPPRDMGYWELLHEVLQEEDTAERDRFMMYIAHTLGIERGKPFEPTEAQQAALMAGLVSGEAAAKTLVFNERLEGVLRKDGWRYILSGALPDAFEHTQRVRDFDMLDPRSRFTYEAITSSPRMGHPVVGKGQSYAGRFEDTDNDRLVGDGQYVMRFASPPPAELFWSVVVYDVESRTLIVNETQNATVGSRATPDLQTNDDGSVDIYVGPTPPPGKESNWVQSVPGRGWFPYVRMYGPGEDWFDEDAYALPQIEKTDW</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AT13</accession>
    <name>A0A0M7AT13_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Ribose import ATP-binding protein RbsA</fullName>
            <ecNumber evidence="5">3.6.3.17</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">rbsA_7</name>
        <name evidence="5" type="ORF">LAX5112_04745</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.6.3.17" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000030">
        <property type="protein sequence ID" value="CTQ76923.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04745"/>
    <dbReference type="EnsemblBacteria" id="CTQ76923">
        <property type="protein sequence ID" value="CTQ76923"/>
        <property type="gene ID" value="LAX5112_04745"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="6"/>
            <end position="243"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="38"/>
            <end position="45"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ76923.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="262" mass="27923" checksum="2FCCE05C5D1C7261" modified="2015-12-09" version="1">MTAPLVEMKDMCISFGGVRAVDHVSVDLFPGEVVGLLGHNGAGKSTLIKILSGAYKADSGEIRINGNEVHIHSPRDARAQNIETIYQTLALADNLDAASNLFLGRELTSPLGFVDDDAMEAETRKIMGRLNPNFKKFHAPVKALSGGQRQSVAIARAVYFNAKILIMDEPTAALGVHETQMVAELIQELKKQGLGIFLISHDIHDVFQLCDRIAVMKNGQLVGTAKTGDVTDDDVLGMIILGKCPPGATPGPGAIVDDTVVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="32" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ATV4</accession>
    <name>A0A0M7ATV4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Arginine biosynthesis bifunctional protein ArgJ</fullName>
        </recommendedName>
        <domain>
            <recommendedName>
                <fullName evidence="7">Glutamate N-acetyltransferase</fullName>
                <ecNumber evidence="7">2.3.1.35</ecNumber>
            </recommendedName>
            <alternativeName>
                <fullName evidence="7">Ornithine acetyltransferase</fullName>
                <shortName evidence="7">OATase</shortName>
            </alternativeName>
            <alternativeName>
                <fullName evidence="7">Ornithine transacetylase</fullName>
            </alternativeName>
        </domain>
        <domain>
            <recommendedName>
                <fullName evidence="7">Amino-acid acetyltransferase</fullName>
                <ecNumber evidence="7">2.3.1.1</ecNumber>
            </recommendedName>
            <alternativeName>
                <fullName evidence="7">N-acetylglutamate synthase</fullName>
                <shortName evidence="7">AGSase</shortName>
            </alternativeName>
        </domain>
        <component>
            <recommendedName>
                <fullName evidence="7">Arginine biosynthesis bifunctional protein ArgJ alpha chain</fullName>
            </recommendedName>
        </component>
        <component>
            <recommendedName>
                <fullName evidence="7">Arginine biosynthesis bifunctional protein ArgJ beta chain</fullName>
            </recommendedName>
        </component>
    </protein>
    <gene>
        <name evidence="7 8" type="primary">argJ</name>
        <name evidence="8" type="ORF">LAX5112_04838</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>L-glutamate + N(2)-acetyl-L-ornithine = L-ornithine + N-acetyl-L-glutamate</text>
            <dbReference type="Rhea" id="RHEA:15349"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:44337"/>
            <dbReference type="ChEBI" id="CHEBI:46911"/>
            <dbReference type="ChEBI" id="CHEBI:57805"/>
            <dbReference type="EC" id="2.3.1.35"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>acetyl-CoA + L-glutamate = CoA + H(+) + N-acetyl-L-glutamate</text>
            <dbReference type="Rhea" id="RHEA:24292"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:44337"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57288"/>
            <dbReference type="EC" id="2.3.1.1"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="7">Amino-acid biosynthesis; L-arginine biosynthesis; L-ornithine and N-acetyl-L-glutamate from L-glutamate and N(2)-acetyl-L-ornithine (cyclic): step 1/1.</text>
    </comment>
    <comment type="pathway">
        <text evidence="7">Amino-acid biosynthesis; L-arginine biosynthesis; N(2)-acetyl-L-ornithine from L-glutamate: step 1/4.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3 7">Heterotetramer of two alpha and two beta chains.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="miscellaneous">
        <text evidence="7">Some bacteria possess a monofunctional ArgJ, i.e., capable of catalyzing only the fifth step of the arginine biosynthetic pathway.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the ArgJ family.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.35" evidence="7"/>
    <dbReference type="EC" id="2.3.1.1" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000032">
        <property type="protein sequence ID" value="CTQ77213.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673987.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000032.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04838"/>
    <dbReference type="EnsemblBacteria" id="CTQ77213">
        <property type="protein sequence ID" value="CTQ77213"/>
        <property type="gene ID" value="LAX5112_04838"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00068">
        <property type="reaction ID" value="UER00106"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004042">
        <property type="term" value="F:acetyl-CoA:L-glutamate N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004358">
        <property type="term" value="F:glutamate N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0103045">
        <property type="term" value="F:methione N-acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006526">
        <property type="term" value="P:arginine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd02152">
        <property type="entry name" value="OAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.340">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01106">
        <property type="entry name" value="ArgJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002813">
        <property type="entry name" value="Arg_biosynth_ArgJ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016117">
        <property type="entry name" value="ArgJ-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042195">
        <property type="entry name" value="ArgJ_beta_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23100">
        <property type="entry name" value="PTHR23100"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01960">
        <property type="entry name" value="ArgJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56266">
        <property type="entry name" value="SSF56266"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00120">
        <property type="entry name" value="ArgJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="7" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="7" id="KW-0055">Arginine biosynthesis</keyword>
    <keyword evidence="5 7" id="KW-0068">Autocatalytic cleavage</keyword>
    <keyword evidence="7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7" id="KW-0511">Multifunctional enzyme</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0808">Transferase</keyword>
    <feature type="chain" id="PRO_5023349038" description="Arginine biosynthesis bifunctional protein ArgJ alpha chain" evidence="7">
        <location>
            <begin position="1"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5023349037" description="Arginine biosynthesis bifunctional protein ArgJ beta chain" evidence="7">
        <location>
            <begin position="195"/>
            <end position="413"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="7">
        <location>
            <position position="195"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="158"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="184"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="195"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="285"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="408"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="413"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="site" description="Involved in the stabilization of negative charge on the oxyanion by the formation of the oxyanion hole" evidence="7">
        <location>
            <position position="121"/>
        </location>
    </feature>
    <feature type="site" description="Involved in the stabilization of negative charge on the oxyanion by the formation of the oxyanion hole" evidence="7">
        <location>
            <position position="122"/>
        </location>
    </feature>
    <feature type="site" description="Cleavage; by autolysis" evidence="7">
        <location>
            <begin position="194"/>
            <end position="195"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000498"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006774"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022813"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01106"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ77213.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="413" mass="42951" checksum="9EFF919422B69720" modified="2015-12-09" version="1">MSTTVSPLAPKSYPDMPDIEGVTFATAGAGIKYSGRTDVLLASLSEGTAVAGVFTKSKCSSAPVDWCKGILSEGHARALLVNSGNANAFTGNKGKAAVARSAEIVSSAMSCPENEIYLASTGVIGEPLPAEKFAGVADDLVAAQGQASWLDAAKAIMTTDTYPKLATATVELDGETVTINGIAKGAGMIAPDMATMLSFVFTDAPIAPGVLQTILGQNTETSFNAITVDSDTSTSDTVLFFATGAAEKRGVEAVSEIDDPRTDVIRAALADVMTDLAHQIVKDGEGARKFVQISVEGAESDQSAKRIALSIANSPLVKTAVAGEDANWGRVVMAVGKAGEPADRDRLAIWFGDVRVAIEGERDPGYSEEAASAVMKEETIPIRVDLGIGTGEAIVWTCDLTKQYVEINGDYRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZMY6</accession>
    <name>A0A0M6ZMY6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Cyclic di-GMP phosphodiesterase Gmr</fullName>
            <ecNumber evidence="4">3.1.4.52</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">gmr_1</name>
        <name evidence="4" type="ORF">LAX5112_00042</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.4.52" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63717.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670103.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00042"/>
    <dbReference type="EnsemblBacteria" id="CTQ63717">
        <property type="protein sequence ID" value="CTQ63717"/>
        <property type="gene ID" value="LAX5112_00042"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071111">
        <property type="term" value="F:cyclic-guanylate-specific phosphodiesterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd01948">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01949">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00130">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.450">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.450.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012226">
        <property type="entry name" value="Diguanyl_cyclase/Pdiesterase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001633">
        <property type="entry name" value="EAL_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035919">
        <property type="entry name" value="EAL_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003018">
        <property type="entry name" value="GAF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029016">
        <property type="entry name" value="GAF-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000160">
        <property type="entry name" value="GGDEF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001610">
        <property type="entry name" value="PAC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000014">
        <property type="entry name" value="PAS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000700">
        <property type="entry name" value="PAS-assoc_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035965">
        <property type="entry name" value="PAS-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013656">
        <property type="entry name" value="PAS_4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00563">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13185">
        <property type="entry name" value="GAF_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00990">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08448">
        <property type="entry name" value="PAS_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005925">
        <property type="entry name" value="Dos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00052">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00065">
        <property type="entry name" value="GAF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00267">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00086">
        <property type="entry name" value="PAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00091">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141868">
        <property type="entry name" value="SSF141868"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55785">
        <property type="entry name" value="SSF55785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00254">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00229">
        <property type="entry name" value="sensory_box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50883">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50887">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50113">
        <property type="entry name" value="PAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PAC" evidence="1">
        <location>
            <begin position="123"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="domain" description="GGDEF" evidence="3">
        <location>
            <begin position="373"/>
            <end position="507"/>
        </location>
    </feature>
    <feature type="domain" description="EAL" evidence="2">
        <location>
            <begin position="516"/>
            <end position="770"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50113"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ63717.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="777" mass="86962" checksum="2CDA37EFEEB46A0C" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZNR0</accession>
    <name>A0A0M6ZNR0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase</fullName>
            <ecNumber evidence="2">2.4.2.53</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">arnC</name>
        <name evidence="2" type="ORF">LAX5112_00098</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.4.2.53" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63871.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_050776120.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00098"/>
    <dbReference type="EnsemblBacteria" id="CTQ63871">
        <property type="protein sequence ID" value="CTQ63871"/>
        <property type="gene ID" value="LAX5112_00098"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0099621">
        <property type="term" value="F:undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001173">
        <property type="entry name" value="Glyco_trans_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00535">
        <property type="entry name" value="Glycos_transf_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glyco_trans_2-like" evidence="1">
        <location>
            <begin position="19"/>
            <end position="179"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00535"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ63871.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="253" mass="27947" checksum="EA2EAFF21468361F" modified="2015-12-09" version="1">MTQSYLEALAATKGGVAVTVVVPAKDEAENLPILLDEIETALSGRTFEVIVIDDGSSDGTDIVLQDYAATHDWLRPVRHEKSCGQSCAVRTGLQHARGDIVATIDGDGENNPAYIPQLLDALEAAGPSAALAAGQRLGRKASLAKRYASKFANKLRGAILKDNTRDSGCGLKALRREVFLQLPYFDSWHRFLPALVIREGYNVVHIDVQDRQRRHGTSKYGIFDRAFVGVLDLFGVWWLRRRRKKIPVVRPLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPG5</accession>
    <name>A0A0M6ZPG5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Flagellar basal-body rod protein FlgF</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">flgF</name>
        <name evidence="7" type="ORF">LAX5112_00190</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="4">The basal body constitutes a major portion of the flagellar organelle and consists of five rings (E,L,P,S, and M) mounted on a central rod. The rod consists of about 26 subunits of FlgG in the distal portion, and FlgB, FlgC and FlgF are thought to build up the proximal portion of the rod with about 6 subunits each.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 4">Bacterial flagellum basal body</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 4">Belongs to the flagella basal body rod proteins family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64132.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670193.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00190"/>
    <dbReference type="EnsemblBacteria" id="CTQ64132">
        <property type="protein sequence ID" value="CTQ64132"/>
        <property type="gene ID" value="LAX5112_00190"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030694">
        <property type="term" value="C:bacterial-type flagellum basal body, rod"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071973">
        <property type="term" value="P:bacterial-type flagellum-dependent cell motility"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001444">
        <property type="entry name" value="Flag_bb_rod_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020013">
        <property type="entry name" value="Flagellar_FlgE/F/G"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010930">
        <property type="entry name" value="Flg_bb/hook_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037925">
        <property type="entry name" value="FlgE/F/G-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012836">
        <property type="entry name" value="FlgF"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00460">
        <property type="entry name" value="Flg_bb_rod"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06429">
        <property type="entry name" value="Flg_bbr_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF117143">
        <property type="entry name" value="SSF117143"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03506">
        <property type="entry name" value="FlgEFG_subfam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02490">
        <property type="entry name" value="flgF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0975">Bacterial flagellum</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Flg_bb_rod" evidence="5">
        <location>
            <begin position="5"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="domain" description="Flg_bbr_C" evidence="6">
        <location>
            <begin position="183"/>
            <end position="237"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009677"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023143"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU362116"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00460"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF06429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ64132.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="243" mass="26057" checksum="835EAB55A276D5F5" modified="2015-12-09" version="1">MQSALYVALSAQVALSNRLETVSRNVANMNTAGYRADEINFAEMVSKAGPDKVSFSSGGENYISRQNGSLNKTDNPLDLAIEGEAWFAIRDANGGLSYTRDGRLHISDDGTLKTVTGQVVVGAGGQPIQLNPDGGTPLITQNGDVIQGDEDIVGQIGLFLIPNDAKLTRKENSAVVPDRAVIPVQVFDQHGIRQGYVEGANINPVREMTKMIMISRAFESATKMIDMGSESQKTAIRELGKTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPM5</accession>
    <name>A0A0M6ZPM5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Iron uptake protein A1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">futA1</name>
        <name evidence="4" type="ORF">LAX5112_00373</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64705.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670354.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00373"/>
    <dbReference type="EnsemblBacteria" id="CTQ64705">
        <property type="protein sequence ID" value="CTQ64705"/>
        <property type="gene ID" value="LAX5112_00373"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026045">
        <property type="entry name" value="Ferric-bd"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002825">
        <property type="entry name" value="CfbpA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0408">Iron</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809183" evidence="3">
        <location>
            <begin position="28"/>
            <end position="343"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="38"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="224"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="225"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR002825-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ64705.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="343" mass="37449" checksum="4662A49284BD9219" modified="2015-12-09" version="1">MPSFRSTVSRAGLAAALLIASSPLALATGELNLYSSRHYDTDERLYSDFEEQSGIKINRIEGKADELLTRMEAEGQNSPADILLTVDTSRLERAKGMGLLQSVESPVLEQRLPGYVQDDDNQWFGFSQRARIIFYDKEKVAEPPRTYQDLADPKYKGMICIRSSSNVYTQTITAALIEHLGEEAVKDWATAVVGNFARDPQGGDTDQLRGIVSGECAIAMSNTYYFGRALRKPVKGLSDDVAKIGWVFPNQDNIGAHMNLSGGGIAKHSPNKENAIKFLEYLASDQAQQYFSAGNDEYPAVPGVGISPSVAQLGFFKPDDVDASAIAENVPAAQKLLNEAGWK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPS3</accession>
    <name>A0A0M6ZPS3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Transglycosylase associated protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">LAX5112_00229</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the UPF0410 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64242.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008196031.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00229"/>
    <dbReference type="EnsemblBacteria" id="CTQ64242">
        <property type="protein sequence ID" value="CTQ64242"/>
        <property type="gene ID" value="LAX5112_00229"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007341">
        <property type="entry name" value="Transgly_assoc"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04226">
        <property type="entry name" value="Transgly_assoc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="6"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="32"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="60"/>
            <end position="81"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011006"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ64242.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="82" mass="8319" checksum="822289B5F951A33E" modified="2015-12-09" version="1">MDVKAILIWAAIGIIAGWLASVVVGGGGLIRYLITGLIGAFVGGFLFKAVGINIDLGNAYVNEIVVAAIGAVVIVLLARLIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQQ1</accession>
    <name>A0A0M6ZQQ1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">NTE family protein RssA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">rssA_1</name>
        <name evidence="4" type="ORF">LAX5112_00298</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64440.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670275.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ64440">
        <property type="protein sequence ID" value="CTQ64440"/>
        <property type="gene ID" value="LAX5112_00298"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016042">
        <property type="term" value="P:lipid catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016035">
        <property type="entry name" value="Acyl_Trfase/lysoPLipase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002641">
        <property type="entry name" value="PNPLA_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01734">
        <property type="entry name" value="Patatin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52151">
        <property type="entry name" value="SSF52151"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51635">
        <property type="entry name" value="PNPLA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0442">Lipid degradation</keyword>
    <keyword evidence="1 2" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PNPLA" evidence="3">
        <location>
            <begin position="49"/>
            <end position="222"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="GXSXG" evidence="2">
        <location>
            <begin position="80"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="DGA/G" evidence="2">
        <location>
            <begin position="209"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="2">
        <location>
            <position position="82"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="2">
        <location>
            <position position="209"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01161"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51635"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ64440.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="317" mass="33641" checksum="2361D8C75669EF79" modified="2015-12-09" version="1">MERRSFLTGAVVTGSTILASGANGHAASSQVTPENTAANPAKRTDGFHLALGGGAAKAFAHIPVLEALDDLGVKPEVIAGTSMGSILGGYYASGMSGKDIRSFTIDLFTQKGQLLQKLFLTDGRTWGSLLNMVRPSIIDPLVLFETLFPDGLAENFKDLQIPMKVVATDFHRQSQAVLTEGALLPAIAASSALPMLLTPVQIDGRVLIDGGFVNPTPFDVFEDTDYPVVAVDVTGADFSAIDGLPSGMETWIGSFSITLHSLVAAKLSCAQPDLLLEPAIGHFQTMDFFEVEAILEAADPIREDVKRGLDRLLGQKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="34" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRC8</accession>
    <name>A0A0M6ZRC8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Oxygen-dependent choline dehydrogenase</fullName>
            <shortName evidence="5">CDH</shortName>
            <shortName evidence="5">CHD</shortName>
            <ecNumber evidence="5">1.1.99.1</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Betaine aldehyde dehydrogenase</fullName>
            <shortName evidence="5">BADH</shortName>
            <ecNumber evidence="5">1.2.1.8</ecNumber>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5 12" type="primary">betA</name>
        <name evidence="12" type="ORF">LAX5112_00408</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5 8">
            <text>A + choline = AH2 + betaine aldehyde</text>
            <dbReference type="Rhea" id="RHEA:17433"/>
            <dbReference type="ChEBI" id="CHEBI:13193"/>
            <dbReference type="ChEBI" id="CHEBI:15354"/>
            <dbReference type="ChEBI" id="CHEBI:15710"/>
            <dbReference type="ChEBI" id="CHEBI:17499"/>
            <dbReference type="EC" id="1.1.99.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>betaine aldehyde + H2O + NAD(+) = glycine betaine + 2 H(+) + NADH</text>
            <dbReference type="Rhea" id="RHEA:15305"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15710"/>
            <dbReference type="ChEBI" id="CHEBI:17750"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="EC" id="1.2.1.8"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="5 6">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="5 8">Amine and polyamine biosynthesis; betaine biosynthesis via choline pathway; betaine aldehyde from choline (cytochrome c reductase route): step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 5 7">Belongs to the GMC oxidoreductase family.</text>
    </comment>
    <dbReference type="EC" id="1.1.99.1" evidence="5"/>
    <dbReference type="EC" id="1.2.1.8" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64802.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670381.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00408"/>
    <dbReference type="EnsemblBacteria" id="CTQ64802">
        <property type="protein sequence ID" value="CTQ64802"/>
        <property type="gene ID" value="LAX5112_00408"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00529">
        <property type="reaction ID" value="UER00385"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008802">
        <property type="term" value="F:betaine-aldehyde dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008812">
        <property type="term" value="F:choline dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019285">
        <property type="term" value="P:glycine betaine biosynthetic process from choline"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00750">
        <property type="entry name" value="Choline_dehydrogen"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011533">
        <property type="entry name" value="BetA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012132">
        <property type="entry name" value="GMC_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000172">
        <property type="entry name" value="GMC_OxRdtase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007867">
        <property type="entry name" value="GMC_OxRtase_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11552">
        <property type="entry name" value="PTHR11552"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05199">
        <property type="entry name" value="GMC_oxred_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00732">
        <property type="entry name" value="GMC_oxred_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000137">
        <property type="entry name" value="Alcohol_oxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01810">
        <property type="entry name" value="betA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00623">
        <property type="entry name" value="GMC_OXRED_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00624">
        <property type="entry name" value="GMC_OXRED_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5 6" id="KW-0274">FAD</keyword>
    <keyword evidence="2 5 7" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="5" id="KW-0520">NAD</keyword>
    <keyword evidence="4 5 12" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GMC_OxRdtase_N" evidence="10">
        <location>
            <begin position="82"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="domain" description="GMC_OxRdtase_N" evidence="11">
        <location>
            <begin position="254"/>
            <end position="268"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="531"/>
            <end position="552"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="5">
        <location>
            <position position="468"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="6"/>
            <end position="35"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="84"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="92"/>
            <end position="95"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="219"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010790"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00750"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR000137-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU003969"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS00623"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS00624"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ64802.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="552" mass="60863" checksum="A2C9E36966E8C515" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRF4</accession>
    <name>A0A0M6ZRF4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Methyl-accepting chemotaxis protein 4</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">mcp4_1</name>
        <name evidence="9" type="ORF">LAX5112_00582</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="3">Belongs to the methyl-accepting chemotaxis (MCP) protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65308.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670511.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00582"/>
    <dbReference type="EnsemblBacteria" id="CTQ65308">
        <property type="protein sequence ID" value="CTQ65308"/>
        <property type="gene ID" value="LAX5112_00582"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004888">
        <property type="term" value="F:transmembrane signaling receptor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006935">
        <property type="term" value="P:chemotaxis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004090">
        <property type="entry name" value="Chemotax_Me-accpt_rcpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004089">
        <property type="entry name" value="MCPsignal_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000727">
        <property type="entry name" value="T_SNARE_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00015">
        <property type="entry name" value="MCPsignal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00260">
        <property type="entry name" value="CHEMTRNSDUCR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00283">
        <property type="entry name" value="MA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50111">
        <property type="entry name" value="CHEMOTAXIS_TRANSDUC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50192">
        <property type="entry name" value="T_SNARE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4" id="KW-0807">Transducer</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="21"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="442"/>
            <end position="464"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="8">
        <location>
            <begin position="462"/>
            <end position="515"/>
        </location>
    </feature>
    <feature type="domain" description="Methyl-accepting transducer" evidence="6">
        <location>
            <begin position="555"/>
            <end position="791"/>
        </location>
    </feature>
    <feature type="domain" description="T-SNARE coiled-coil homology" evidence="7">
        <location>
            <begin position="707"/>
            <end position="769"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023224"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00029447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ65308.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="811" mass="85238" checksum="9097F995D2A9E9C8" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZS94</accession>
    <name>A0A0M6ZS94_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Cyanophycin synthetase</fullName>
            <ecNumber evidence="4">6.3.2.29</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">cphA_1</name>
        <name evidence="4" type="ORF">LAX5112_00700</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="6.3.2.29" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65625.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00700"/>
    <dbReference type="EnsemblBacteria" id="CTQ65625">
        <property type="protein sequence ID" value="CTQ65625"/>
        <property type="gene ID" value="LAX5112_00700"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071160">
        <property type="term" value="F:cyanophycin synthetase activity (L-aspartate-adding)"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
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        <property type="entry name" value="ATP-grasp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013815">
        <property type="entry name" value="ATP_grasp_subdomain_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017534">
        <property type="entry name" value="GNAT-acetyltransferase"/>
    </dbReference>
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    </dbReference>
    <dbReference type="Pfam" id="PF00583">
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
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    <keyword evidence="4" id="KW-0436">Ligase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
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        <location>
            <begin position="118"/>
            <end position="272"/>
        </location>
    </feature>
    <feature type="domain" description="ATP-grasp" evidence="2">
        <location>
            <begin position="337"/>
            <end position="579"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00409"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ65625.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="592" mass="65423" checksum="24F525F5122D12AB" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSC1</accession>
    <name>A0A0M6ZSC1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Carboxylate/amino acid/amine transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_00517</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65121.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670463.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00517"/>
    <dbReference type="EnsemblBacteria" id="CTQ65121">
        <property type="protein sequence ID" value="CTQ65121"/>
        <property type="gene ID" value="LAX5112_00517"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000620">
        <property type="entry name" value="EamA_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00892">
        <property type="entry name" value="EamA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="43"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="68"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="121"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="161"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="192"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="226"/>
            <end position="247"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="253"/>
            <end position="275"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="282"/>
            <end position="300"/>
        </location>
    </feature>
    <feature type="domain" description="EamA" evidence="2">
        <location>
            <begin position="5"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="domain" description="EamA" evidence="2">
        <location>
            <begin position="160"/>
            <end position="298"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ65121.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="301" mass="32185" checksum="A6ED27A443EA631D" modified="2015-12-09" version="1">MELWIPITLFAAFCQNLRSAVQKHLKGQLGSTGATFVRFGYGFPFACLYVAVLHAGFGFAFPEINSVFLIAGALGGLAQIFGTFLLVYLFSFRNFTVGTAYSKTEPIQAALFGFLLLSEQISWATGFCILIGIAGVIVISLARTSLSASVVRHSLMSRPALIGLGSAAMFGASAAAYRVASLSLEGTGVPMQAGFALAYATLFQTIVMIAWMIFREPEQLTASLAAWRVAIWAGATGVAGSIGWFTAMTLQNVAYVRALAQIELVFTFLASWLVFKETIARSEIVGCALIVLAVLGIILWS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSJ4</accession>
    <name>A0A0M6ZSJ4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Inner membrane ABC transporter permease protein YdcV</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ydcV_2</name>
        <name evidence="7" type="ORF">LAX5112_00499</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
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        <property type="protein sequence ID" value="CTQ65070.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670450.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00499"/>
    <dbReference type="EnsemblBacteria" id="CTQ65070">
        <property type="protein sequence ID" value="CTQ65070"/>
        <property type="gene ID" value="LAX5112_00499"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="64"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="98"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="128"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="172"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="230"/>
            <end position="252"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="60"/>
            <end position="248"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ65070.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="261" mass="28369" checksum="5E8812C6A6A8179B" modified="2015-12-09" version="1">MGWSLIRAYTLLVYLFMFLPVLVVVLLSFNASQFGSFPMTGFSFRWFVELAGNDAILRAFRTSIILGALTAVISTTLGVLASLALVRYNVPGRNLISTLLIAPILVPEVVLAVALLLFLNFLSINKSFLLLLMGHVIFTLPFVILVVQARLVGIRRDYEEAALSLGASPVQAFFQITLPLLAPAVFAGMLFAFTISFDDITGTLFWKPGGVETVPTQIFAMLRNSISPEINALGTVMIFLTVGLPLLGLAVARRMAIQRGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSM5</accession>
    <name>A0A0M6ZSM5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Phosphonate ABC transporter, periplasmic phosphonate binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00550</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65216.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670488.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00550"/>
    <dbReference type="EnsemblBacteria" id="CTQ65216">
        <property type="protein sequence ID" value="CTQ65216"/>
        <property type="gene ID" value="LAX5112_00550"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005808936" evidence="1">
        <location>
            <begin position="25"/>
            <end position="310"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65216.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="310" mass="34071" checksum="9D1387D48EC94DFC" modified="2015-12-09" version="1">MTDIKRFFLFVGLCLVLVLPTSAAANSDLPDRVRLGVVVATEQTARERIEPFRRALEEITDLPVDLFLMPTMADGIEALAAGRIDYIRLSPSGYAASFELCKCVEPLATAGPDDFPARFYAIMIAKRDGETVTLENLKDMRLGVGAKHAVTGYRVPLVNLAADGINAREYFQTLVEVRDPVEGIRAVLDGRVHATLGWSSLAGEAKNGFTAGTLNEYYVSGGSQFEDLDIVWRSAPIPYSAHTVRTNLPDVLKRAIRAGLMDLRREDPAAYLAIEPDLPGGFEPVVHSDYRPVLRTFEKPYAKVIQTDAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTU5</accession>
    <name>A0A0M6ZTU5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00716</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65672.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ65672">
        <property type="protein sequence ID" value="CTQ65672"/>
        <property type="gene ID" value="LAX5112_00716"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005808957" evidence="1">
        <location>
            <begin position="22"/>
            <end position="243"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65672.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="243" mass="25560" checksum="3CA2DF652067229F" modified="2015-12-09" version="1">MAKRSWICLSALAMMLLPAHAEIVVVAVSGTDEIAPGTRLATGQAINLPEGAKLTLLSQSGEMQVLEGPYSGEPAAKDEASTQNSDAAGWSAVLALVGDPDARSDVMGASRVTDGEFMVPPSIWHVSVDSSGPRCTLPDAVALWRRDAGQGTDISIRSSAGRLTDVAWPANEHMLALPNEFAADGRMMVSIDGELRDLALIVAPDDLPNAGPGAVFTWLMEHKCQRQALALIGRVHAGLNLTD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTY7</accession>
    <name>A0A0M6ZTY7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">AB hydrolase superfamily protein YdjP</fullName>
            <ecNumber evidence="2">3.-.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ydjP</name>
        <name evidence="2" type="ORF">LAX5112_00919</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.-.-.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66235.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670803.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00919"/>
    <dbReference type="EnsemblBacteria" id="CTQ66235">
        <property type="protein sequence ID" value="CTQ66235"/>
        <property type="gene ID" value="LAX5112_00919"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000073">
        <property type="entry name" value="AB_hydrolase_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12697">
        <property type="entry name" value="Abhydrolase_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AB hydrolase-1" evidence="1">
        <location>
            <begin position="17"/>
            <end position="254"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12697"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66235.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="264" mass="29404" checksum="D01BDF40ABA796FB" modified="2015-12-09" version="1">MTASGLYIRDEGAGWPIVFVHGWSCPGMFFDRQVADLKDHARCIVPDLPGHGATGDRVPRTIEAAADAIHTYLSEQDLRNVVLCGWSMGALVSYALIERHGADRIGSMIAIDMSPKVLNDAGWQNGTRSGLTAGQNTHFINTITADWQRLPRRIARRMFAADSEPCPGLLDCASGEIAKANPLWLKDMWMSLTALDFRELLRTFPVPFHLAAGAKSQLYSPEVHRWHRENVPDFQLTLFDHSGHAPHLEEPEKFQALVLGELNR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUW6</accession>
    <name>A0A0M6ZUW6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="11">UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase</fullName>
            <ecNumber evidence="11">2.7.8.31</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">wcaJ_1</name>
        <name evidence="11" type="ORF">LAX5112_01013</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the bacterial sugar transferase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.8.31" evidence="11"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66565.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670913.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01013"/>
    <dbReference type="EnsemblBacteria" id="CTQ66565">
        <property type="protein sequence ID" value="CTQ66565"/>
        <property type="gene ID" value="LAX5112_01013"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000271">
        <property type="term" value="P:polysaccharide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003362">
        <property type="entry name" value="Bact_transf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017475">
        <property type="entry name" value="EPS_sugar_tfrase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017473">
        <property type="entry name" value="Undecaprenyl-P_gluc_Ptfrase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02397">
        <property type="entry name" value="Bac_transf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03025">
        <property type="entry name" value="EPS_sugtrans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03023">
        <property type="entry name" value="WcaJ_sugtrans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0270">Exopolysaccharide synthesis</keyword>
    <keyword evidence="6 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 11" id="KW-0808">Transferase</keyword>
    <keyword evidence="4 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 9" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="84"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="110"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="144"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="176"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="348"/>
            <end position="369"/>
        </location>
    </feature>
    <feature type="domain" description="Bac_transf" evidence="10">
        <location>
            <begin position="343"/>
            <end position="531"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="1"/>
            <end position="39"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF02397"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ66565.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="537" mass="58809" checksum="269A981A4B15160C" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZV51</accession>
    <name>A0A0M6ZV51_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00875</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66116.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670768.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00875"/>
    <dbReference type="EnsemblBacteria" id="CTQ66116">
        <property type="protein sequence ID" value="CTQ66116"/>
        <property type="gene ID" value="LAX5112_00875"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021735">
        <property type="entry name" value="DUF3306"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11748">
        <property type="entry name" value="DUF3306"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="206"/>
            <end position="225"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66116.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="225" mass="25516" checksum="7610C6E2EBBA3215" modified="2015-12-09" version="1">MTGDEKSGMDFWSRRKAAVQRSEELERVLVEEAEVAKERAELETKSDAEILEELNLPDPDTLTENDDFSQFLSAAVPERLKRRALRRLWGLNPVLANLDGLVDYADDFTDAATVVSNMQTVYQVGRGMVERFVEGAEEEAVEEFADEISDPVEENKRNAAVQDEQNTAEQHNCGENEEALVQLTQGEALLQDMPIRDEFESSVNDSINVEAEAPQRPRRMRFDYS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVB8</accession>
    <name>A0A0M6ZVB8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Maltose/maltodextrin import ATP-binding protein MalK</fullName>
            <ecNumber evidence="10">3.6.3.19</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">malK_3</name>
        <name evidence="10" type="ORF">LAX5112_00899</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Peripheral membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.19" evidence="10"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66181.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670785.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00899"/>
    <dbReference type="EnsemblBacteria" id="CTQ66181">
        <property type="protein sequence ID" value="CTQ66181"/>
        <property type="gene ID" value="LAX5112_00899"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008643">
        <property type="term" value="P:carbohydrate transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03301">
        <property type="entry name" value="ABC_MalK_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015855">
        <property type="entry name" value="ABC_transpr_MalK-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008995">
        <property type="entry name" value="Mo/tungstate-bd_C_term_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013611">
        <property type="entry name" value="Transp-assoc_OB_typ2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08402">
        <property type="entry name" value="TOBE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50331">
        <property type="entry name" value="SSF50331"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 8 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="10" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-0472">Membrane</keyword>
    <keyword evidence="5 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ABC transporter" evidence="9">
        <location>
            <begin position="4"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="36"/>
            <end position="43"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ66181.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="355" mass="38463" checksum="6A00EADFFBBB76C1" modified="2015-12-09" version="1">MGAIQLKSVEKWFGDLQVIKGIDLDIQDGEFVIFVGPSGCGKSTLLRLISGLEESSRGAIEIDGKDVTALPPSGRGLSMVFQSYALYPHMSVRENVGFGLKTAGVPKAEIDRKVNAAAEILKLDDYLERRPKALSGGQRQRVAIGRAIVREPSAFLFDEPLSNLDAALRVEMRFEVARLHKSLGTTMIYVTHDQVEAMTLADKIVVLQTGEIEQVGSPRELYERPDNLFVAQFIGSPKMNVLPCSVTGGSFSLDGHGGGHYPHGGASGAPVKLGIRPEHMLVVAPEEGHCSGTVEVAEYLGADTFLYVALDGLDTVLVRISGSEDFAEGTRIGLKFDESRMHFFDKDDRAIRSGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVY0</accession>
    <name>A0A0M6ZVY0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00910</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66210.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670795.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ66210">
        <property type="protein sequence ID" value="CTQ66210"/>
        <property type="gene ID" value="LAX5112_00910"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809006" evidence="1">
        <location>
            <begin position="21"/>
            <end position="233"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66210.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="233" mass="26569" checksum="716CADF0E300EF46" modified="2015-12-09" version="1">MPYSIVVILMLFLGMQPAEAMDCPGNVAAIADAELNAAVIPKTQAIYQHLGCELKLVKLPGRRGILAFNSGRVDGELFRVTIIEKLYQTAFVRSQYPLLQTQQGVWVAPTHFLENGDLIGYVIGRRWQEEFAERHKGQYRFVEYSGASDMRHDYNAGHLDGFLGASLTIDELMKSEKLSERPELALKISLVKVYHYLDKRYAKFMSEFDRLLQSCSEECQYSQVCQHDVCNYN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZW91</accession>
    <name>A0A0M6ZW91_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Pyrimidine (Deoxy)nucleoside triphosphate pyrophosphohydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01186</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67035.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01186"/>
    <dbReference type="EnsemblBacteria" id="CTQ67035">
        <property type="protein sequence ID" value="CTQ67035"/>
        <property type="gene ID" value="LAX5112_01186"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015797">
        <property type="entry name" value="NUDIX_hydrolase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000086">
        <property type="entry name" value="NUDIX_hydrolase_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00293">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55811">
        <property type="entry name" value="SSF55811"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51462">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nudix hydrolase" evidence="1">
        <location>
            <begin position="45"/>
            <end position="185"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51462"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67035.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="186" mass="20263" checksum="5C3C6AC4A56D4C72" modified="2015-12-09" version="1">MWRPLKHLDQPNDSVLSTVLNCCHVSFSEPLYTAMILKQTNVLEPIRPTVRAVIYRSGDLLVQVKQKRGSAAYLTLPGGKQDPGETAAEALIRECAEEVGTTVTVGPLLHVAEVFKTKADGKRHQLELLFACEVSDNYVPVMGPHPDPSQVGTTWASPVSRAAEFRPAYAMALTTTSPVYLGVFDG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXV4</accession>
    <name>A0A0M6ZXV4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01219</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67117.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671058.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67117">
        <property type="protein sequence ID" value="CTQ67117"/>
        <property type="gene ID" value="LAX5112_01219"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67117.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="156" mass="16938" checksum="9F81E433E3A1B40B" modified="2015-12-09" version="1">MPEKKIAGAEYRVEPLAAKDAYLLLTEIIRLAGPGAKHLPGLMAILSTTDPKERFLADVAAFAACSEVINVHGASAFVDLKQRVISNAQVKRPSGIYDHLDLEDDFCGDLETAEKVFDFVMEVQFGNFSAGSEANGPVALAMIIVRNIFRIQKSAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYI9</accession>
    <name>A0A0M6ZYI9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Site-specific recombinase XerD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_01281</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67232.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671113.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01281"/>
    <dbReference type="EnsemblBacteria" id="CTQ67232">
        <property type="protein sequence ID" value="CTQ67232"/>
        <property type="gene ID" value="LAX5112_01281"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.443.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011010">
        <property type="entry name" value="DNA_brk_join_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013762">
        <property type="entry name" value="Integrase-like_cat_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002104">
        <property type="entry name" value="Integrase_catalytic"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00589">
        <property type="entry name" value="Phage_integrase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56349">
        <property type="entry name" value="SSF56349"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51898">
        <property type="entry name" value="TYR_RECOMBINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tyr recombinase" evidence="3">
        <location>
            <begin position="168"/>
            <end position="335"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="328"/>
            <end position="352"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="329"/>
            <end position="352"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ67232.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="352" mass="39459" checksum="A911023397875B17" modified="2015-12-09" version="1">MPLEIYQRGRTWWIRGRTDGIDGYIKRSLKTSEEAVAKTKLREIERKAQQRAILGEDAPTEADELTFAAAVMIYDAKPADANYLMKVIPEIGHMKVKDITPKLVRGLGKKIYPKNATDTWRRQVVSPICAVINNAHENVKGVPAIRVKGYTSKERIAQDEARGKQSRKEKTPGSWEWLDKFRAEANPYMGALALFMFTTGARISQSVQVKPDDLDLKNGRLWLPASKGHQGQYVELIPEMIVTLAKLKPRGGRVFGYKSRHSVYGPWQTACKNAGIEYIAPHAAGRHGFGTETVVRQNLNPVDVAKAGRWSSPRILLDTYAHSEEGSANVRDAFTRRKTDSGTKPGHIKRVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYW3</accession>
    <name>A0A0M6ZYW3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Chloromuconate cycloisomerase</fullName>
            <ecNumber evidence="2">5.5.1.7</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">tcbD</name>
        <name evidence="2" type="ORF">LAX5112_01411</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="5.5.1.7" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67517.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671243.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01411"/>
    <dbReference type="EnsemblBacteria" id="CTQ67517">
        <property type="protein sequence ID" value="CTQ67517"/>
        <property type="gene ID" value="LAX5112_01411"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018850">
        <property type="term" value="F:chloromuconate cycloisomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016855">
        <property type="term" value="F:racemase and epimerase activity, acting on amino acids and derivatives"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006579">
        <property type="term" value="P:amino-acid betaine catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.390.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034622">
        <property type="entry name" value="4R-hPro_betaine_2-epimerase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036849">
        <property type="entry name" value="Enolase-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029017">
        <property type="entry name" value="Enolase-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029065">
        <property type="entry name" value="Enolase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013342">
        <property type="entry name" value="Mandelate_racemase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034593">
        <property type="entry name" value="Mandelate_racemase_DgoD-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013341">
        <property type="entry name" value="Mandelate_racemase_N_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48080">
        <property type="entry name" value="PTHR48080"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13378">
        <property type="entry name" value="MR_MLE_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02746">
        <property type="entry name" value="MR_MLE_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDF00556">
        <property type="entry name" value="4R-hydroxyproline_betaine_2-ep"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00922">
        <property type="entry name" value="MR_MLE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51604">
        <property type="entry name" value="SSF51604"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54826">
        <property type="entry name" value="SSF54826"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0413">Isomerase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MR_MLE" evidence="1">
        <location>
            <begin position="143"/>
            <end position="237"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00922"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67517.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="367" mass="39098" checksum="D53073E0F26E990A" modified="2015-12-09" version="1">MRIREIHVYSHTLPVKDGPYVMASTVVEVLETTLVKIVDETGAAGWGETCPVGPVYAPAHAAGALAAIKEIAPGLIGADVTGLRSFQRLMDKRLNGHAYAKAAFDIAAHDLLGKRTGLSVADLLGGAMTEKVPSYFASGVGSPEDIARIAKDKADQGFKRMQIKVGGRAVDLDIETIRKVWEAVGTRMRLIVDGNRGWTSQEALRVSRSCLDIPIVLEQPCNTIEEVARIRHQLGHGVYLDESATDISAVVRAIGDGICDGFGMKLTRIGGLQPMSVFRDICEAAALPHTCDDSWGGDIIAAACVQIAATVHPKFLEGVWIAQPYIDGNYDSRNPVNIVDGHLNVPTGPGLGVVPDEALFGAPVASF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYY8</accession>
    <name>A0A0M6ZYY8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Formate-dependent nitrite reductase complex subunit NrfG</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01362</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67382.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671170.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01362"/>
    <dbReference type="EnsemblBacteria" id="CTQ67382">
        <property type="protein sequence ID" value="CTQ67382"/>
        <property type="gene ID" value="LAX5112_01362"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017004">
        <property type="term" value="P:cytochrome complex assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017560">
        <property type="entry name" value="Cyt_c_biogenesis_CcmI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="SSF48452"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03142">
        <property type="entry name" value="cytochro_ccmI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0201">Cytochrome c-type biogenesis</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022748"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67382.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="378" mass="40751" checksum="7EF849E8B3225C30" modified="2015-12-09" version="1">MIFWILISVLTALAALSVLVPLTRSRSSVEEAAAQADAAVYKEQLAAIDRDLSDGLIDAEAAEAARTETARRLLSVHDRKDEARPVTVSKLRIRSVQLVALVALPAAALGTYLALGSPDLQDQPLAARLSAPADEQPVELLVARVERHLAEDPEDGQGWAVIAPVYMRMGQPDSAARAYSNAIRILGPRPDWLTDMGEAMTVSNEGVITELARTAFQQAVDLEPTAVKPRFFLALALTQEGKRDEAINAWQALLEGADPQAAWVPVARRELAGLTGETPELLPALRGPSQADVEAAGEMSDDDRQKMITTMVQGLAARIDANGGTVAEWGQLMRAYMVLGKRDEAFDTYRRAEKIFAERPAELARIKDAAVTLGLSGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZ40</accession>
    <name>A0A0M6ZZ40_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative amino-acid metabolite efflux pump</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">eamA_2</name>
        <name evidence="3" type="ORF">LAX5112_01446</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67597.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671271.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67597">
        <property type="protein sequence ID" value="CTQ67597"/>
        <property type="gene ID" value="LAX5112_01446"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000620">
        <property type="entry name" value="EamA_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00892">
        <property type="entry name" value="EamA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="35"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="66"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="97"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="122"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="150"/>
            <end position="169"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="181"/>
            <end position="198"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="210"/>
            <end position="232"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="239"/>
            <end position="259"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="265"/>
            <end position="285"/>
        </location>
    </feature>
    <feature type="domain" description="EamA" evidence="2">
        <location>
            <begin position="7"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="domain" description="EamA" evidence="2">
        <location>
            <begin position="153"/>
            <end position="282"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ67597.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="299" mass="32012" checksum="F455C66CADC4939B" modified="2015-12-09" version="1">MSERTTGILEMTFAMTLIGTLGIFVVFSGESPVTVAFWRCLFGAIGLALICSLKGAFAFKISPKQFLLAVLGGIALTTNWVMLFYAIGHASISLTTAIYNTQPFMLVCFGVLFFGEHLTLRKLSWLALAFCGVVVIAQSKPELAYADGNFAVGVALSIGAAFLWAVAVVVTKKLSGIPSHLIALIQVSAGAILLAPFASVSDLPSQSTAWASLLTLGFVHTAMMYTILYSAVQKLPTDLQGALTFLYPSVAYVTDYLVLGQKLGTMQILGVAVIMLAAAGMTLGWRLPFFRKEKSYHQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZK1</accession>
    <name>A0A0M6ZZK1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">3-hydroxybenzoate 6-hydroxylase 1</fullName>
            <ecNumber evidence="2">1.14.13.24</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">xlnD</name>
        <name evidence="2" type="ORF">LAX5112_01465</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.14.13.24" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67646.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671284.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01465"/>
    <dbReference type="EnsemblBacteria" id="CTQ67646">
        <property type="protein sequence ID" value="CTQ67646"/>
        <property type="gene ID" value="LAX5112_01465"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018669">
        <property type="term" value="F:3-hydroxybenzoate 6-monooxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071949">
        <property type="term" value="F:FAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002938">
        <property type="entry name" value="FAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01494">
        <property type="entry name" value="FAD_binding_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FAD_binding_3" evidence="1">
        <location>
            <begin position="11"/>
            <end position="353"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01494"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67646.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="404" mass="44108" checksum="186DB682BF1AB0E3" modified="2015-12-09" version="1">MSETGTPPSPIVIAGAGIGGLTAALTLRRAGHEIVLIDKAKALSEVGAGLQLSPNACSVLDGFGLLQDLKALGHQPDNLRVWSGKTGDQISKVRLGSYLLERHGQPFIVIHRADLQGTLLKKVEATDGITLMLGTALTDAKTGDAGNLVCTYQTGETTGTLNCKALIGADGVWSTVRRLIPNHKNARFSGQVAYRSTLPIDKVPAQWRKDSGLWLHKDSHLVHYPIRSSEQLNIVALTTEDWQDETWSAPAGKDELLHRFKDWPTDIRNLLNGPERWLKWALCTVKADGPWTHGQIALLGDAAHAMLPYMAQGAAMAIEDAAELANHFPVETENTAAALRAYERTRKPRAERIQETGFKNAKTFHMSGLPATARDMVMKFSKPESLAARFDYVYGWKPNQALPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A024</accession>
    <name>A0A0M7A024_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01237</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67154.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67154">
        <property type="protein sequence ID" value="CTQ67154"/>
        <property type="gene ID" value="LAX5112_01237"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67154.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="51" mass="5675" checksum="18F8C4588B714C83" modified="2015-12-09" version="1">MACSPCKKRQQMLRNAYQRGGVKGAIKQLSAVARDVVKKPPHIRARTVRNG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A065</accession>
    <name>A0A0M7A065_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">TRAP transporter solute receptor, DctP family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_01550</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the bacterial solute-binding protein 7 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67866.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671346.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01550"/>
    <dbReference type="EnsemblBacteria" id="CTQ67866">
        <property type="protein sequence ID" value="CTQ67866"/>
        <property type="gene ID" value="LAX5112_01550"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071702">
        <property type="term" value="P:organic substance transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.190.170">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018389">
        <property type="entry name" value="DctP_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006311">
        <property type="entry name" value="TAT_signal"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038404">
        <property type="entry name" value="TRAP_DctP_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33376">
        <property type="entry name" value="PTHR33376"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03480">
        <property type="entry name" value="DctP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0675">Receptor</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809054" evidence="3">
        <location>
            <begin position="23"/>
            <end position="368"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ67866.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="368" mass="40166" checksum="721B554D5BDFBA21" modified="2015-12-09" version="1">MKKLTTRRDALRGIAGAGVAGAATLAAPHIATAQGQTTTWKIQTSWPGGAGLQIFKDWCGTIVEKTGGELAFQPFGANDVVGDFQLYDAVKNGVLDAVNPFTIYAQGIIPAATFLTSIPLGLRNPHEFDVFYYGLGGIDIARELYEKQGMKFVGPVHHGPNIIHSKVPIRSIDDFRGRKMRLPGGMVAEVFTEIGAETTVLPGSEIFPALEKGTIDVADYVGPAVNYALGFSQVTDYIVMGPPGFMSLYQPVDIMDITVGMDAWNKLSPQMQQFVEMETHVYSDAHHAAIQKADQDAWAKFEADGTEVTRLTQDDVELMTEIAVPIWFNYANRDADSARVFKMQLDYMMSGSLGYVDPSLTEGLELKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0B4</accession>
    <name>A0A0M7A0B4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Bacterial extracellular solute-binding proteins, family 3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_01282</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67234.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671114.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01282"/>
    <dbReference type="EnsemblBacteria" id="CTQ67234">
        <property type="protein sequence ID" value="CTQ67234"/>
        <property type="gene ID" value="LAX5112_01282"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809164" evidence="2">
        <location>
            <begin position="29"/>
            <end position="253"/>
        </location>
    </feature>
    <feature type="domain" description="PBPb" evidence="3">
        <location>
            <begin position="33"/>
            <end position="248"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00497"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ67234.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="253" mass="28494" checksum="4236C24BDC3F7585" modified="2015-12-09" version="1">MVFAYLSSLARLLRAALILMCFALPVRAQDMTIVTEEFPPYNYSDNGLAQGLSSEVVKAVLAETGLTADFLFLPWARAYLTAQNTKNTVIFSIGRIPEREDLFEWIGVIAPYNTSLYKLASRTDLTVNSLSDAKDYSIGVSVEDVIYQYLKSQNFTNLDIVGEDILNIRKLALSRLDLIAFDEAAFQYYLDLEDINPALFDRIYRLDDISGGLYMAINKDSDPELIQSLKSGLKAIKADGTYEQILNRHRVMN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0F9</accession>
    <name>A0A0M7A0F9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">50S ribosomal protein L1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8 10" type="primary">rplA</name>
        <name evidence="10" type="ORF">LAX5112_01714</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.</text>
    </comment>
    <comment type="function">
        <text evidence="8">Protein L1 is also a translational repressor protein, it controls the translation of the L11 operon by binding to its mRNA.</text>
    </comment>
    <comment type="subunit">
        <text evidence="8">Part of the 50S ribosomal subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 8 9">Belongs to the universal ribosomal protein uL1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68369.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008196798.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01714"/>
    <dbReference type="EnsemblBacteria" id="CTQ68369">
        <property type="protein sequence ID" value="CTQ68369"/>
        <property type="gene ID" value="LAX5112_01714"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015934">
        <property type="term" value="C:large ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006417">
        <property type="term" value="P:regulation of translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00403">
        <property type="entry name" value="Ribosomal_L1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.790">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01318_B">
        <property type="entry name" value="Ribosomal_L1_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005878">
        <property type="entry name" value="Ribosom_L1_bac-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002143">
        <property type="entry name" value="Ribosomal_L1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023674">
        <property type="entry name" value="Ribosomal_L1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028364">
        <property type="entry name" value="Ribosomal_L1/biogenesis"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016095">
        <property type="entry name" value="Ribosomal_L1_3-a/b-sand"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023673">
        <property type="entry name" value="Ribosomal_L1_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00687">
        <property type="entry name" value="Ribosomal_L1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002155">
        <property type="entry name" value="Ribosomal_L1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56808">
        <property type="entry name" value="SSF56808"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01169">
        <property type="entry name" value="rplA_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01199">
        <property type="entry name" value="RIBOSOMAL_L1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 8" id="KW-0678">Repressor</keyword>
    <keyword evidence="7 8 9" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="6 8 9" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="5 8" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="3 8" id="KW-0699">rRNA-binding</keyword>
    <keyword evidence="4 8" id="KW-0810">Translation regulation</keyword>
    <keyword evidence="8" id="KW-0820">tRNA-binding</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010531"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022845"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01318"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU000659"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ68369.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="232" mass="24271" checksum="508F344B0F1F1037" modified="2015-12-09" version="1">MAKVGKRISTAREGIDRNKLYSLNEAISLVKGRSKTKFDETVEVAINLGVDPRHADQMVRGVCVLPNGTGKSVKVAVFARGDKAEEAKAAGADIVGAEELVQEVQGGKIDFDTVIATPDMMPLVGRLGKVLGPRGMMPNPKVGTVTPDVTKAVNDAKGGAVQFRVEKAGIVHAGVGKVSFSEDKISENIKALFDAVQKAKPTGAKGTYMKRVALSSTMGPGVKVDIASVAGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0N2</accession>
    <name>A0A0M7A0N2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Multidrug resistance protein MdtN</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">mdtN</name>
        <name evidence="3" type="ORF">LAX5112_01656</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68157.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671422.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01656"/>
    <dbReference type="EnsemblBacteria" id="CTQ68157">
        <property type="protein sequence ID" value="CTQ68157"/>
        <property type="gene ID" value="LAX5112_01656"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039562">
        <property type="entry name" value="MFP_biotin_lipoyl_2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13533">
        <property type="entry name" value="Biotin_lipoyl_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Biotin_lipoyl_2" evidence="2">
        <location>
            <begin position="42"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="101"/>
            <end position="187"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13533"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ68157.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="338" mass="37031" checksum="B22F7109CB629494" modified="2015-12-09" version="1">MFEKKFLVVFVSVLFLIFIGNEISRHFFAYTSDAYITSDYASMSPAVAGTLAELHVTNDTEVRKGDPLFTLDQTPYKLAAESAAANVAVSEQALQVAKDGVEEAKTNVTATKAILDDAEATQRRLSTLQESGVVTEQRLDDATRDLAEAQANYERALAARTGAQDQLKQKAAELRQATAEKAVAEYNLDQTVVRAPFDGQVVPFNTKTGQYLDAGDVVLILVSRTGYRIVANVHEQHVQFIKPGQPVYYMVSTAPWVFFKGSVRGISKGIARSTLETQALPYVDPETDWIRLSQRFPVEINLSVHPDDRQAFMGADARVLIWNTDPPPTAGSPGGNGQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A112</accession>
    <name>A0A0M7A112_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Chromosome segregation protein SMC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01649</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68136.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671415.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01649"/>
    <dbReference type="EnsemblBacteria" id="CTQ68136">
        <property type="protein sequence ID" value="CTQ68136"/>
        <property type="gene ID" value="LAX5112_01649"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="419"/>
            <end position="447"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="472"/>
            <end position="493"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="8"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="2">
        <location>
            <begin position="422"/>
            <end position="436"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ68136.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="493" mass="54356" checksum="E3AEDACD3CCD303B" modified="2015-12-09" version="1">MLTGRQTLGTIEQALSDLRREESELSQRIERATRGLTDLQERQTEAYRDLARFHLDNDAAGALNTRLDSAAREARRLLEKRTADYKVLSDQLRQCESERSTLHARRQQLDADRDTAENQMDDLLEAVDTRLEGDDAFQTQKAAVERAEETAAAAAAKAETSEADRLEKGKAYEADPLFLYLWDRGFATPSYDKRGLTRSLDRWVAGLIGYNAARANYAMLTGIPERMAKHAARCAEIADQEQAKLAELSRNAMTDAAGTDLVGSIETLSGEIDSIDGDLDQLDRRIETLAGALAEFASGEDNDFQKAEEHLASSLKMDALNDLWRAAIETPSPEDEKIVQRIEDFKDRIEQVAREVRQDRELQRDIGRRRAELADVVKRFRSNGYGSWETTFSDDRLTTVLLGELVKGAISGAEYWDRAQRSHKRRRPKGRRVAFPKGKGLPRSMGGFGGIPGPGGFGGPGAGMPGRNDGFGGGGFKTGGGFGGGGFKTGDTF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1N4</accession>
    <name>A0A0M7A1N4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6 7 8">Elongation factor Tu</fullName>
            <shortName evidence="7">EF-Tu</shortName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">tuf_1</name>
        <name evidence="7" type="synonym">tuf</name>
        <name evidence="11" type="synonym">tuf_2</name>
        <name evidence="10" type="ORF">LAX5112_01708</name>
        <name evidence="11" type="ORF">LAX5112_01724</name>
    </gene>
    <organism evidence="10 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Noorani M."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <reference evidence="12" key="2">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Monomer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 7">Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68356.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68396.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008188955.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01708"/>
    <dbReference type="EnsemblBacteria" id="CTQ68356">
        <property type="protein sequence ID" value="CTQ68356"/>
        <property type="gene ID" value="LAX5112_01708"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ68396">
        <property type="protein sequence ID" value="CTQ68396"/>
        <property type="gene ID" value="LAX5112_01724"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003746">
        <property type="term" value="F:translation elongation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01884">
        <property type="entry name" value="EF_Tu"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd03697">
        <property type="entry name" value="EFTU_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00118_B">
        <property type="entry name" value="EF_Tu_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041709">
        <property type="entry name" value="EF-Tu_GTP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004161">
        <property type="entry name" value="EFTu-like_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033720">
        <property type="entry name" value="EFTU_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031157">
        <property type="entry name" value="G_TR_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005225">
        <property type="entry name" value="Small_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000795">
        <property type="entry name" value="T_Tr_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009000">
        <property type="entry name" value="Transl_B-barrel_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009001">
        <property type="entry name" value="Transl_elong_EF1A/Init_IF2_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004541">
        <property type="entry name" value="Transl_elong_EFTu/EF1A_bac/org"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004160">
        <property type="entry name" value="Transl_elong_EFTu/EF1A_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00009">
        <property type="entry name" value="GTP_EFTU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03144">
        <property type="entry name" value="GTP_EFTU_D2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03143">
        <property type="entry name" value="GTP_EFTU_D3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00315">
        <property type="entry name" value="ELONGATNFCT"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50447">
        <property type="entry name" value="SSF50447"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50465">
        <property type="entry name" value="SSF50465"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00485">
        <property type="entry name" value="EF-Tu"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00231">
        <property type="entry name" value="small_GTP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00301">
        <property type="entry name" value="G_TR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51722">
        <property type="entry name" value="G_TR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 7 10" id="KW-0251">Elongation factor</keyword>
    <keyword evidence="5 7" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="2 7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4 7" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tr-type G" evidence="9">
        <location>
            <begin position="10"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="19"/>
            <end position="26"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="81"/>
            <end position="85"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="136"/>
            <end position="139"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007249"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022768"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00029554"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00118"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU004061"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ68356.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ68396.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="396" mass="42965" checksum="98891C7F378DA177" modified="2015-12-09" version="1">MAKEKFERNKPHVNIGTIGHVDHGKTTLTAAITMTLAEAGGATAKAYDEIDGAPEEKARGITISTAHVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHILLARQVGVPALVVFMNKVDQVDDEELLELVEMEIRELLSSYEFPGDDIPIVKGSALAAVENRDAAIGRDAIRELMAAVDDYIPTPERPKDQPFLMPIEDVFSISGRGTVVTGRVERGIVKVGEEVEIVGIKDTTKTTVTGVEMFRKLLDSGEAGDNIGALIRGVAREDVERGQVLCKPGSVNPHTKFKAEAYILTKEEGGRHTPFFTNYRPQFYFRTTDVTGVVHLPEGTEMVMPGDNVSVDVELIVPIAMEDGLRFAIREGGRTVGAGVVASIIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A270</accession>
    <name>A0A0M7A270_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Opacity protein antigens</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01553</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67874.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01553"/>
    <dbReference type="EnsemblBacteria" id="CTQ67874">
        <property type="protein sequence ID" value="CTQ67874"/>
        <property type="gene ID" value="LAX5112_01553"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011250">
        <property type="entry name" value="OMP/PagP_b-brl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027385">
        <property type="entry name" value="OMP_b-brl"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13505">
        <property type="entry name" value="OMP_b-brl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56925">
        <property type="entry name" value="SSF56925"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="OMP_b-brl" evidence="1">
        <location>
            <begin position="67"/>
            <end position="235"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13505"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67874.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="253" mass="26868" checksum="FF0E7B2230894A15" modified="2015-12-09" version="1">MVSSFTNRDSCVFYGCSPRPKPFRRLRNSFPNSRHWLLKPFVLCAALAVLVGGAKAADMPVGGGTDFVPMAPAGSIWAGPYLGFEAGGSQTVTEVKAGGQKKDYSRFDAAFGVFGGYNWEVSRVILGLEGAATYIGDTKKGQHPVLGTIETGSKWSVTAKTRVGLPINNFMPYVSLGVAATDHSLKANGRTESSVGLGAVLGAGVEVAMHDNWRLRADYTLTGIADTKDTFAGTQAKRTAGNHRLMLGISRAF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A292</accession>
    <name>A0A0M7A292_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Tryptophan--tRNA ligase</fullName>
            <ecNumber evidence="8">6.1.1.2</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">Tryptophanyl-tRNA synthetase</fullName>
            <shortName evidence="8">TrpRS</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8 10" type="primary">trpS</name>
        <name evidence="10" type="ORF">LAX5112_01996</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Catalyzes the attachment of tryptophan to tRNA(Trp).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 8">
            <text>ATP + L-tryptophan + tRNA(Trp) = AMP + diphosphate + H(+) + L-tryptophanyl-tRNA(Trp)</text>
            <dbReference type="Rhea" id="RHEA:24080"/>
            <dbReference type="Rhea" id="RHEA-COMP:9671"/>
            <dbReference type="Rhea" id="RHEA-COMP:9705"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57912"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78535"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.2"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="8">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 8 9">Belongs to the class-I aminoacyl-tRNA synthetase family.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.2" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69135.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451170.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01996"/>
    <dbReference type="EnsemblBacteria" id="CTQ69135">
        <property type="protein sequence ID" value="CTQ69135"/>
        <property type="gene ID" value="LAX5112_01996"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004830">
        <property type="term" value="F:tryptophan-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006436">
        <property type="term" value="P:tryptophanyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00806">
        <property type="entry name" value="TrpRS_core"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00140_B">
        <property type="entry name" value="Trp_tRNA_synth_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001412">
        <property type="entry name" value="aa-tRNA-synth_I_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002305">
        <property type="entry name" value="aa-tRNA-synth_Ic"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002306">
        <property type="entry name" value="Trp-tRNA-ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024109">
        <property type="entry name" value="Trp-tRNA-ligase_bac-type"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00579">
        <property type="entry name" value="tRNA-synt_1b"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01039">
        <property type="entry name" value="TRNASYNTHTRP"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00233">
        <property type="entry name" value="trpS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00178">
        <property type="entry name" value="AA_TRNA_LIGASE_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 8 9" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="5 8 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 8 9" id="KW-0436">Ligase</keyword>
    <keyword evidence="4 8 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6 8 9" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="short sequence motif" description="'HIGH' region" evidence="8">
        <location>
            <begin position="14"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="'KMSKS' region" evidence="8">
        <location>
            <begin position="220"/>
            <end position="224"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="13"/>
            <end position="15"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="21"/>
            <end position="22"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="138"/>
        </location>
        <ligand>
            <name>L-tryptophan</name>
            <dbReference type="ChEBI" id="CHEBI:57912"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="150"/>
            <end position="152"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="211"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="220"/>
            <end position="224"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000107"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005594"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00140"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU363036"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ69135.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="359" mass="39197" checksum="5C37E510FB7ED4E5" modified="2015-12-09" version="1">MTAFQPRVFSGVQPTGNLHLGNYLGAVSRWVPLQDQMPAIFCVVDSHAITAGFPDPSELTNATREVTAAYMAAGIDPKKSIIFNQSQVREHMELAWIFNCVARMGWLNRMTQFKEKAGKNKENASVGLFAYPNLMAADILAYRATHVPVGDDQKQHLELTRDIAAKFNNDFGARIKELGIGVPNPTPSPELPEELYFPLTEPMIAGPATRIMSLRDGTKKMSKSDPSDLSRINLKDDADAIAKKIKKAKTDPDALPSETDGLEGRPEADNLVGIYAALNGMSKDDVLKEYGGQQFSAFKPALSDLAVAKLAPMTDEMRRLTGDPAQIDAILKEGAENASAIAEPVLKDVRKIIGFLDVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A333</accession>
    <name>A0A0M7A333_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">tRNA-dihydrouridine(20/20a) synthase</fullName>
            <ecNumber evidence="6">1.3.1.91</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">U20-specific dihydrouridine synthase</fullName>
            <shortName evidence="6">U20-specific Dus</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">tRNA-dihydrouridine synthase A</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="10" type="primary">dus_2</name>
        <name evidence="6" type="synonym">dusA</name>
        <name evidence="10" type="ORF">LAX5112_01921</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>5,6-dihydrouridine(20) in tRNA + NAD(+) = H(+) + NADH + uridine(20) in tRNA</text>
            <dbReference type="Rhea" id="RHEA:53340"/>
            <dbReference type="Rhea" id="RHEA-COMP:13533"/>
            <dbReference type="Rhea" id="RHEA-COMP:13534"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:65315"/>
            <dbReference type="ChEBI" id="CHEBI:74443"/>
            <dbReference type="EC" id="1.3.1.91"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>5,6-dihydrouridine(20) in tRNA + NADP(+) = H(+) + NADPH + uridine(20) in tRNA</text>
            <dbReference type="Rhea" id="RHEA:53336"/>
            <dbReference type="Rhea" id="RHEA-COMP:13533"/>
            <dbReference type="Rhea" id="RHEA-COMP:13534"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="ChEBI" id="CHEBI:65315"/>
            <dbReference type="ChEBI" id="CHEBI:74443"/>
            <dbReference type="EC" id="1.3.1.91"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>5,6-dihydrouridine(20a) in tRNA + NAD(+) = H(+) + NADH + uridine(20a) in tRNA</text>
            <dbReference type="Rhea" id="RHEA:53348"/>
            <dbReference type="Rhea" id="RHEA-COMP:13535"/>
            <dbReference type="Rhea" id="RHEA-COMP:13536"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:65315"/>
            <dbReference type="ChEBI" id="CHEBI:74443"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>5,6-dihydrouridine(20a) in tRNA + NADP(+) = H(+) + NADPH + uridine(20a) in tRNA</text>
            <dbReference type="Rhea" id="RHEA:53344"/>
            <dbReference type="Rhea" id="RHEA-COMP:13535"/>
            <dbReference type="Rhea" id="RHEA-COMP:13536"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="ChEBI" id="CHEBI:65315"/>
            <dbReference type="ChEBI" id="CHEBI:74443"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 6 7">
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the Dus family. DusA subfamily.</text>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the dus family.</text>
    </comment>
    <dbReference type="EC" id="1.3.1.91" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68882.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671613.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01921"/>
    <dbReference type="EnsemblBacteria" id="CTQ68882">
        <property type="protein sequence ID" value="CTQ68882"/>
        <property type="gene ID" value="LAX5112_01921"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010181">
        <property type="term" value="F:FMN binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102264">
        <property type="term" value="F:tRNA-dihydrouridine20 synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd02801">
        <property type="entry name" value="DUS_like_FMN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02041">
        <property type="entry name" value="DusA_subfam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035587">
        <property type="entry name" value="DUS-like_FMN-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001269">
        <property type="entry name" value="DUS_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004653">
        <property type="entry name" value="DusA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018517">
        <property type="entry name" value="tRNA_hU_synthase_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42907">
        <property type="entry name" value="PTHR42907"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01207">
        <property type="entry name" value="Dus"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006621">
        <property type="entry name" value="Dus"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00742">
        <property type="entry name" value="yjbN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01136">
        <property type="entry name" value="UPF0034"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 6 7" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="3 6 7" id="KW-0288">FMN</keyword>
    <keyword evidence="6" id="KW-0521">NADP</keyword>
    <keyword evidence="5 6 7" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="4 6 7" id="KW-0819">tRNA processing</keyword>
    <keyword evidence="6" id="KW-0820">tRNA-binding</keyword>
    <feature type="domain" description="Dus" evidence="9">
        <location>
            <begin position="17"/>
            <end position="310"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="6 8">
        <location>
            <position position="102"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="19"/>
            <end position="21"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="72"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="141"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="173"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="213"/>
            <end position="215"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="235"/>
            <end position="236"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="site" description="Interacts with tRNA" evidence="6">
        <location>
            <position position="99"/>
        </location>
    </feature>
    <feature type="site" description="Interacts with tRNA; defines subfamily-specific binding signature" evidence="6">
        <location>
            <position position="185"/>
        </location>
    </feature>
    <feature type="site" description="Interacts with tRNA" evidence="6">
        <location>
            <position position="188"/>
        </location>
    </feature>
    <feature type="site" description="Interacts with tRNA; defines subfamily-specific binding signature" evidence="6">
        <location>
            <position position="301"/>
        </location>
    </feature>
    <feature type="site" description="Interacts with tRNA; defines subfamily-specific binding signature" evidence="6">
        <location>
            <position position="304"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02041"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRNR" id="PIRNR006621"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR006621-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF01207"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ68882.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="339" mass="37299" checksum="1B482C10DB8EA268" modified="2015-12-09" version="1">MTTRDRLYTAHQPRFAVAPMMEWTDRHCRAFHRQLSAHALLYTEMVTTGAVIHGDREHILGFSGLEHPVACQLGGSDPQAMAEAAKIVEDFGYDEVNINVGCPSDRVQSGRFGACLMEEPQLVADCVSAMKAAVAIPVTVKCRIGVDDQDPEPALDAVADLTFAAGSDALWVHARKAWLQGLSPKENRDVPPLDYDRVVRLKQRLPDKFIGLNGGLDTLEQGEPYLKTLDGLMYGRAAYHSPEILGEVDARFYGAETETISPWDAVRGHMTYLEDQLSKGVKLAHMTRHMLGLFHGRPGARSWRRILTVEAIKPGAGLEVVEKALDAVSPTNFEVDAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A450</accession>
    <name>A0A0M7A450_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">UPF0102 protein LAX5112_02085</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02085</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the UPF0102 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69361.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008190595.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02085"/>
    <dbReference type="EnsemblBacteria" id="CTQ69361">
        <property type="protein sequence ID" value="CTQ69361"/>
        <property type="gene ID" value="LAX5112_02085"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1350.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00048">
        <property type="entry name" value="UPF0102"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011335">
        <property type="entry name" value="Restrct_endonuc-II-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011856">
        <property type="entry name" value="tRNA_endonuc-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003509">
        <property type="entry name" value="UPF0102"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34039">
        <property type="entry name" value="PTHR34039"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02021">
        <property type="entry name" value="UPF0102"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52980">
        <property type="entry name" value="SSF52980"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00252">
        <property type="entry name" value="TIGR00252"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00048"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ69361.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="128" mass="14735" checksum="7D40B814DCF090AF" modified="2015-12-09" version="1">MAKGDGQTTERRRKAHIRGLSAENFAAWYLRLTGWRILKQRYKTKAGEIDLIVKKRKTVAFIEVKARKSRQAALEAVSPASQKRIVRAAKIFVAEHPKAGFFTLRFDVMIIRPWALPERIVNAFEARD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A452</accession>
    <name>A0A0M7A452_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02201</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69659.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ69659">
        <property type="protein sequence ID" value="CTQ69659"/>
        <property type="gene ID" value="LAX5112_02201"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ69659.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="49" mass="5227" checksum="BA3638FF84CAC7CC" modified="2015-12-09" version="1">MSFVDFAGGKIKVGKTLVGREANRLHGIGDGESLVLGHFSFHQSDINAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4L3</accession>
    <name>A0A0M7A4L3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">LAX5112_02319</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the glycosyltransferase 87 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70008.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671950.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70008">
        <property type="protein sequence ID" value="CTQ70008"/>
        <property type="gene ID" value="LAX5112_02319"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016758">
        <property type="term" value="F:hexosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018584">
        <property type="entry name" value="GT87"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09594">
        <property type="entry name" value="GT87"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="18"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="48"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="117"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="141"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="179"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="209"/>
            <end position="230"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="276"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="308"/>
            <end position="334"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="346"/>
            <end position="364"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00024033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ70008.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="413" mass="45373" checksum="C11D746B496250CF" modified="2015-12-09" version="1">MEKLKHLETILTPDRIDVFLRLGPIFYLLGMLGYHIQEAHYRDAVHGLFLLGDYICYWLAAVTVLAGTPFDVYDNDAFRLVAENFVAEYGYLPFLYPPTYLLAMVPFGLLPNWLSHILFFSLTLGALALVGRIIWGGWKGALIACAFPGVLGVLIHGQNSFLTAALFGGALAALGGKRYILAGILIGCMTYKPQIGVLIPFALLAGRYWTTFITAGVTTVVFAALPALAFGPEIWLAFLEQSRFAATLLDQELVRHWKYLSIYTGLRIIGLPDQPAMLAQLLFAAGCLVWVVRLWWSDAPFELKAAGLVAASLLASPYMLTYEYVILAVPLLFLARHAVDGNLMPFDTSLYVLIVLLTLLARVIAEHTGVPLASAPVLLTMFLTHRYYKQWEHGRAGVAGTIRPPVSSPAPGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5F4</accession>
    <name>A0A0M7A5F4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Glutamine-binding periplasmic protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">glnH_2</name>
        <name evidence="4" type="ORF">LAX5112_02267</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69821.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02267"/>
    <dbReference type="EnsemblBacteria" id="CTQ69821">
        <property type="protein sequence ID" value="CTQ69821"/>
        <property type="gene ID" value="LAX5112_02267"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00062">
        <property type="entry name" value="PBPb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809280" evidence="2">
        <location>
            <begin position="25"/>
            <end position="265"/>
        </location>
    </feature>
    <feature type="domain" description="PBPb" evidence="3">
        <location>
            <begin position="28"/>
            <end position="248"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00062"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ69821.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="265" mass="29524" checksum="39674350A1FFB404" modified="2015-12-09" version="1">MLMRIFSRLVAVLAAAVFAQTASARAESWLISSETDFPPYNYYQGAQFKGIDTEIVRLIVTELGYKPVFVQLPWKRVVQSVESNEVDLGYQFVGTKERFEKFRMVGPFRNGVTTLMFPADSNIEFQSVDDLTGLVIGTVRGYAYAPEFDKADHVSKEEATDNETNVRKLAAGRLHAIVGDRDTLAFLAARLGYSGKFKFAEEPLAVVPRYVAFPKERAEAAKAFQAMLDQKISDGAVDAIINKYTTIQVSQLPQQADEAIVQTSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5G1</accession>
    <name>A0A0M7A5G1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Aerobic cobaltochelatase subunit CobT</fullName>
            <ecNumber evidence="3">6.6.1.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">cobT</name>
        <name evidence="3" type="ORF">LAX5112_02271</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="6.6.1.2" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69831.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671887.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02271"/>
    <dbReference type="EnsemblBacteria" id="CTQ69831">
        <property type="protein sequence ID" value="CTQ69831"/>
        <property type="gene ID" value="LAX5112_02271"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051116">
        <property type="term" value="F:cobaltochelatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009236">
        <property type="term" value="P:cobalamin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.410">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006538">
        <property type="entry name" value="CobT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025861">
        <property type="entry name" value="CobT_VWA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002035">
        <property type="entry name" value="VWF_A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036465">
        <property type="entry name" value="vWFA_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06213">
        <property type="entry name" value="CobT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11775">
        <property type="entry name" value="CobT_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF031715">
        <property type="entry name" value="Cob_chel_CobT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00327">
        <property type="entry name" value="VWA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53300">
        <property type="entry name" value="SSF53300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01651">
        <property type="entry name" value="CobT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50234">
        <property type="entry name" value="VWFA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0436">Ligase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="VWFA" evidence="2">
        <location>
            <begin position="414"/>
            <end position="617"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="224"/>
            <end position="277"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="290"/>
            <end position="315"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50234"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ69831.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="638" mass="70553" checksum="BA70A32E88ACF7D6" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5I3</accession>
    <name>A0A0M7A5I3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Putative ABC transporter ATP-binding protein/MT1014</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">LAX5112_02228</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69732.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671859.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02228"/>
    <dbReference type="EnsemblBacteria" id="CTQ69732">
        <property type="protein sequence ID" value="CTQ69732"/>
        <property type="gene ID" value="LAX5112_02228"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd03255">
        <property type="entry name" value="ABC_MJ0796_LolCDE_FtsE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017911">
        <property type="entry name" value="MacB_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="7"/>
            <end position="238"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="43"/>
            <end position="50"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ69732.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="238" mass="25049" checksum="E185267795B70812" modified="2015-12-09" version="1">MTTIPAIALKNVHLTLGEGAGQVHILKGIDLEIGKSTSVGLVGPSGSGKSTLLMVMAGLERADEGSVVVAGSELGGLSEDQLALFRGRNVGIIFQSFHLVPNMTALENVAVPLELAGDADAFKKAQAELEAVGLGKRLHHYPAQMSGGEQQRVAVARALVVEPEILIADEPTGNLDDSTGAQIVDLMFSAQRDRKTTLVLVTHDPALAEKCDRVIRVRSGEIEETTQNLAAAQEQVTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5R1</accession>
    <name>A0A0M7A5R1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Glutamate--tRNA ligase</fullName>
            <ecNumber evidence="8">6.1.1.17</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">gltX_1</name>
        <name evidence="8" type="ORF">LAX5112_02237</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="6">Belongs to the class-I aminoacyl-tRNA synthetase family.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.17" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69756.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02237"/>
    <dbReference type="EnsemblBacteria" id="CTQ69756">
        <property type="protein sequence ID" value="CTQ69756"/>
        <property type="gene ID" value="LAX5112_02237"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0110165">
        <property type="term" value="C:cellular anatomical entity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004818">
        <property type="term" value="F:glutamate-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006418">
        <property type="term" value="P:tRNA aminoacylation for protein translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001412">
        <property type="entry name" value="aa-tRNA-synth_I_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000924">
        <property type="entry name" value="Glu/Gln-tRNA-synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020058">
        <property type="entry name" value="Glu/Gln-tRNA-synth_Ib_cat-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00749">
        <property type="entry name" value="tRNA-synt_1c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00987">
        <property type="entry name" value="TRNASYNTHGLU"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00178">
        <property type="entry name" value="AA_TRNA_LIGASE_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="3 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 6 8" id="KW-0436">Ligase</keyword>
    <keyword evidence="2 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4 6" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="tRNA-synt_1c" evidence="7">
        <location>
            <begin position="27"/>
            <end position="306"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU363037"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00749"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ69756.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="314" mass="35034" checksum="BDB9AC020B2ED78E" modified="2015-12-09" version="1">MIGTVSRKRPAASNQPFSSFMTEPVFRFAPSPNGHLHLGHALSALLNARAAVALHGRFLVRVEDIDQTRCTPDLERDMFEDLAWLGVPLNEPVLRQSEAFPHYRSALEKLQDLGLVYPAYLTRAEIKRFVVAFEEKGIPWPRDPDGAPLYPGDDAVLSEAEIQERAQSDAPFALRLDMTAALGRIDEPLTWQEFGAEGPSLFEPAKTIAADAASWGDVVLARKDTPTSYHLSVVVDDARQGITDVLRGQDLYAATSVHRVLQHLLNLPEPRFRHHRLILGEDGRKLSKSNQDTSLRSLRESGVTHVELRRRIGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A626</accession>
    <name>A0A0M7A626_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 5">Ornithine carbamoyltransferase</fullName>
            <shortName evidence="5">OTCase</shortName>
            <ecNumber evidence="3 5">2.1.3.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">argF</name>
        <name evidence="9" type="ORF">LAX5112_02544</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 5">
            <text>carbamoyl phosphate + L-ornithine = H(+) + L-citrulline + phosphate</text>
            <dbReference type="Rhea" id="RHEA:19513"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:46911"/>
            <dbReference type="ChEBI" id="CHEBI:57743"/>
            <dbReference type="ChEBI" id="CHEBI:58228"/>
            <dbReference type="EC" id="2.1.3.3"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family.</text>
    </comment>
    <dbReference type="EC" id="2.1.3.3" evidence="3 5"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70538.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672113.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02544"/>
    <dbReference type="EnsemblBacteria" id="CTQ70538">
        <property type="protein sequence ID" value="CTQ70538"/>
        <property type="gene ID" value="LAX5112_02544"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016597">
        <property type="term" value="F:amino acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004585">
        <property type="term" value="F:ornithine carbamoyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1370">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01109">
        <property type="entry name" value="OTCase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006132">
        <property type="entry name" value="Asp/Orn_carbamoyltranf_P-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006130">
        <property type="entry name" value="Asp/Orn_carbamoylTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036901">
        <property type="entry name" value="Asp/Orn_carbamoylTrfase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006131">
        <property type="entry name" value="Asp_carbamoyltransf_Asp/Orn-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002292">
        <property type="entry name" value="Orn/put_carbamltrans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024904">
        <property type="entry name" value="OTCase_ArgI"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00185">
        <property type="entry name" value="OTCace"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02729">
        <property type="entry name" value="OTCace_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00100">
        <property type="entry name" value="AOTCASE"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00102">
        <property type="entry name" value="OTCASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53671">
        <property type="entry name" value="SSF53671"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00658">
        <property type="entry name" value="orni_carb_tr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5 6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="OTCace_N" evidence="8">
        <location>
            <begin position="8"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="domain" description="OTCace" evidence="7">
        <location>
            <begin position="156"/>
            <end position="305"/>
        </location>
    </feature>
    <feature type="region of interest" description="Carbamoyl phosphate binding" evidence="5">
        <location>
            <begin position="58"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="region of interest" description="Carbamoyl phosphate binding" evidence="5">
        <location>
            <begin position="136"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="region of interest" description="Ornithine binding" evidence="5">
        <location>
            <begin position="231"/>
            <end position="232"/>
        </location>
    </feature>
    <feature type="region of interest" description="Carbamoyl phosphate binding" evidence="5">
        <location>
            <begin position="266"/>
            <end position="267"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="85"/>
        </location>
        <ligand>
            <name>carbamoyl phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58228"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="109"/>
        </location>
        <ligand>
            <name>carbamoyl phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58228"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="167"/>
        </location>
        <ligand>
            <name>L-ornithine</name>
            <dbReference type="ChEBI" id="CHEBI:46911"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="227"/>
        </location>
        <ligand>
            <name>L-ornithine</name>
            <dbReference type="ChEBI" id="CHEBI:46911"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="294"/>
        </location>
        <ligand>
            <name>carbamoyl phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58228"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007805"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00013007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003634"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00185"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF02729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ70538.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="309" mass="33595" checksum="479D37CD2C65BE1A" modified="2015-12-09" version="1">MTANGAYKNFLDLTQFEGDDLRAILETGKKIKATRDGVRRGEGPLAGKVLAMIFEQPSTRTRISFDVGMRELGGETLMLTGAEMQLGRGETIADTAKVLSRFVDGVMIRILDHEALNELAENATIPVINGLTKISHPCQIMADIMTFEEHRGGISGRSIAWTGDSNNVLASWVHAAPRLDFELRIATPAELAPPQNLIETARAKGGSILVTDDPYEAVKGTDCVVTDCWVSMGDDDAESRHNLLGAYQVNERLMAEANGDALFMHCLPAHRGEEVTNEVMDGPNSVVFDEAENRLHAQKGILAWCFGAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6H9</accession>
    <name>A0A0M7A6H9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Methyl-accepting chemotaxis protein 4</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">mcp4_10</name>
        <name evidence="7" type="ORF">LAX5112_02576</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the methyl-accepting chemotaxis (MCP) protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70688.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672166.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70688">
        <property type="protein sequence ID" value="CTQ70688"/>
        <property type="gene ID" value="LAX5112_02576"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004888">
        <property type="term" value="F:transmembrane signaling receptor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006935">
        <property type="term" value="P:chemotaxis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004090">
        <property type="entry name" value="Chemotax_Me-accpt_rcpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004089">
        <property type="entry name" value="MCPsignal_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00015">
        <property type="entry name" value="MCPsignal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00260">
        <property type="entry name" value="CHEMTRNSDUCR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00283">
        <property type="entry name" value="MA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50111">
        <property type="entry name" value="CHEMOTAXIS_TRANSDUC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0807">Transducer</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="15"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="6">
        <location>
            <begin position="235"/>
            <end position="287"/>
        </location>
    </feature>
    <feature type="domain" description="Methyl-accepting transducer" evidence="5">
        <location>
            <begin position="321"/>
            <end position="564"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="3">
        <location>
            <begin position="124"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="3">
        <location>
            <begin position="278"/>
            <end position="305"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00029447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ70688.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="584" mass="62408" checksum="3F57714143956A9F" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6J2</accession>
    <name>A0A0M7A6J2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02045</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69254.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671729.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02045"/>
    <dbReference type="EnsemblBacteria" id="CTQ69254">
        <property type="protein sequence ID" value="CTQ69254"/>
        <property type="gene ID" value="LAX5112_02045"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017026">
        <property type="entry name" value="ImuA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF034285">
        <property type="entry name" value="UCP034285"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="25"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="306"/>
            <end position="329"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69254.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="329" mass="34729" checksum="6D64A2D2DA6D6765" modified="2015-12-09" version="1">MSAASEHSTSLAELRRRIADLEGRLPFKTQFGPAPATAANPQGPDSFLKDRPPNGKTQAEGFEAEPPGKGGSDDLAARCPLGLETLDRLFQSGNSLSGSGLRVGALHEVVSSESRNAGALSGFGLALLARLLAIRPGPVLVVQDIRATQESGRFHGAGLLDFGIDPARLIVVRARKLEDVLWCLEEGASCSALAAVAGEIQGGERLVDLTASRRISLRASRSTVPVILLRHGAAQEPTAAVTRWQISPAASKAPEFLEKAPHAGLGAPAWHIDLTRNREGRPSRLTVEWDHARQTFAAPAHSLALDRGSSLRQDPAPAAGQLHTLRPAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A731</accession>
    <name>A0A0M7A731_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glucose 1-dehydrogenase 2</fullName>
            <ecNumber evidence="2">1.1.1.47</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ycdF_2</name>
        <name evidence="2" type="ORF">LAX5112_02505</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.1.1.47" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70427.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672084.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02505"/>
    <dbReference type="EnsemblBacteria" id="CTQ70427">
        <property type="protein sequence ID" value="CTQ70427"/>
        <property type="gene ID" value="LAX5112_02505"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047936">
        <property type="term" value="F:glucose 1-dehydrogenase [NAD(P)] activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00106">
        <property type="entry name" value="adh_short"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="266"/>
            <end position="287"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70427.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="287" mass="30866" checksum="8ECCE2B778F21006" modified="2015-12-09" version="1">MSLNGKTLFITGASRGIGKAIALRAAREGANVAVAAKTAEPHPKLEGTIFSAAEEIEAAGGKALPIVLDVRDDEAVQAAIDKTADHFGGLDILVNNASAIQLTPLQQTDMKKFDLMHQINTRGTMACSKHAIAHLKKSENPHILMLSPPLDMQEKWFAPFTPYSIAKYGMSLVVLGLSGELRSKGIAVNALWPRTTIATAAIKNIIGGDKMMQTSRTPDILANAAYEIFTTPSKELSGQFLIDDTFLQSRGVTDFDQYRVDPTQSLTPDFFVPDDSPAPASMKPVTT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A764</accession>
    <name>A0A0M7A764_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF374 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02347</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70080.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671969.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02347"/>
    <dbReference type="EnsemblBacteria" id="CTQ70080">
        <property type="protein sequence ID" value="CTQ70080"/>
        <property type="gene ID" value="LAX5112_02347"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd07983">
        <property type="entry name" value="LPLAT_DUF374-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007172">
        <property type="entry name" value="DUF374"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04028">
        <property type="entry name" value="DUF374"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF374" evidence="1">
        <location>
            <begin position="66"/>
            <end position="140"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04028"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70080.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="232" mass="25178" checksum="E8921CD87B7CD38E" modified="2015-12-09" version="1">MLKRIGRHPLVLSAIGSLLAGYLKLVYYTNRFTTEPVTIHEDTDKDLPVIVAMWHGQHFMVPFAKPPHWPAKVMISKSADGEINAIAARKLGMGLIRASGGRTAHQIKKRGGMRGFIEAVRALKDGYSIAMTADVPKGPARHSGVGIVQLAKHSGRPILPVAVATSRSIELNSWDKASVNLPFGRGGIVGGDLIWVPSDTDDEGLEAYRQKVEDGLNTATRRVYELVGRPNG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7A6</accession>
    <name>A0A0M7A7A6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Curved DNA-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">cbpA</name>
        <name evidence="4" type="ORF">LAX5112_02528</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70491.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672102.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02528"/>
    <dbReference type="EnsemblBacteria" id="CTQ70491">
        <property type="protein sequence ID" value="CTQ70491"/>
        <property type="gene ID" value="LAX5112_02528"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051082">
        <property type="term" value="F:unfolded protein binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006457">
        <property type="term" value="P:protein folding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06257">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002939">
        <property type="entry name" value="DnaJ_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001623">
        <property type="entry name" value="DnaJ_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008971">
        <property type="entry name" value="HSP40/DnaJ_pept-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036869">
        <property type="entry name" value="J_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00226">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01556">
        <property type="entry name" value="DnaJ_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00625">
        <property type="entry name" value="JDOMAIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00271">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46565">
        <property type="entry name" value="SSF46565"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49493">
        <property type="entry name" value="SSF49493"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50076">
        <property type="entry name" value="DNAJ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0143">Chaperone</keyword>
    <keyword evidence="4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="J" evidence="3">
        <location>
            <begin position="3"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="130"/>
            <end position="156"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ70491.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="333" mass="35148" checksum="A8E4D7A4C03164AF" modified="2015-12-09" version="1">MRDPYSVLGVAKSANEGDIKKAFRQLAKKYHPDQNKDDPGAQQRFAEVNQAYEIVGDKDKRAQFDRGEIDAEGKQKFQSRGFDGFSGFEDFGATGGTRGFRSSGSTSGGAAGGFDDILNDILGGFGGRGGARGGAGQGAGGSAGASGARARRASPSKGANADLMAAVSLEDILNSGKAQVTLPSGKTVNVTLPKGVVEGEKIRLKGQGHPGDQGGPAGDALIEVRFKMHKLFDVKGYDLHLDLPITLYEAILGAKIRTPTLTGAVNLTIPENTSSGKTMRLKGKGLPTKNGGHGDLLVKIQIMLPPHGDDELDTLMKAWREITPYRVRGHEFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8I0</accession>
    <name>A0A0M7A8I0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative DMT superfamily transporter inner membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02652</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70917.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672223.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02652"/>
    <dbReference type="EnsemblBacteria" id="CTQ70917">
        <property type="protein sequence ID" value="CTQ70917"/>
        <property type="gene ID" value="LAX5112_02652"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000620">
        <property type="entry name" value="EamA_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00892">
        <property type="entry name" value="EamA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="37"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="74"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="98"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="123"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="148"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="177"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="208"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="241"/>
            <end position="257"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="263"/>
            <end position="281"/>
        </location>
    </feature>
    <feature type="domain" description="EamA" evidence="2">
        <location>
            <begin position="6"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="domain" description="EamA" evidence="2">
        <location>
            <begin position="150"/>
            <end position="280"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ70917.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="289" mass="30779" checksum="3BCDFE4335789A60" modified="2015-12-09" version="1">MPANLRGSLFMIVAMALFAIEDMFLKASSVVLPVGEILILFGFGGAVVFGGLALKRGEALVPRDVFTPVMGVRFVFELTGRLFYVLALALTPLSSTTVILQATPIFVVLGAMIFFGERVGWRRWAAIVVGLVGVLIVLRPGADSFTPLSMLAFIGMLGFAGRDLASRAAPKSLSTALLGFYGFITLIIAGVCYAVWAGEGLVWPDMPSGVYVALAVFSGVFAYSSLMLAMRTGDVSIVTPFRYSRLLFGVGLGVVFFGEHLDAQTLVGCAVIVFSGLFILWRGRAAHTG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AA49</accession>
    <name>A0A0M7AA49_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02994</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71978.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ71978">
        <property type="protein sequence ID" value="CTQ71978"/>
        <property type="gene ID" value="LAX5112_02994"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="54"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="87"/>
            <end position="113"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71978.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="136" mass="15370" checksum="8097954CAD5071EB" modified="2015-12-09" version="1">MNKPSQGYQATVRYPLRRHQQQVALRHPTQAHRLNRQVSRITTQKKAHWGVRMLIAFVGWIVGVTAVSLVMFAEYHYPLAKNRDPDLFALVLGTGFAGHAIYAVMAILAVALLTAFNRRKWILWVLIGFAGGLYSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAH2</accession>
    <name>A0A0M7AAH2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">bPH_2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02952</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71859.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672465.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02952"/>
    <dbReference type="EnsemblBacteria" id="CTQ71859">
        <property type="protein sequence ID" value="CTQ71859"/>
        <property type="gene ID" value="LAX5112_02952"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005182">
        <property type="entry name" value="DUF304"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03703">
        <property type="entry name" value="bPH_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="47"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="71"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="111"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="domain" description="bPH_2" evidence="2">
        <location>
            <begin position="101"/>
            <end position="189"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF03703"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ71859.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="225" mass="24517" checksum="C745F4AF8DF5C9F2" modified="2015-12-09" version="1">MKQFVAREHEMEPVPGLPERLPNGEKMLWQGRPSTRLLARHLLKNRWISGYFLILAAWAVFGGLYDGRPLAGIVFSVAVLTALAAILIGMLELFAWAVHKTTLYTITTQRVVIRFGVAFSMTLNLPFKQLAAISMADLPGGAGHVAIQVLPGHQISWLVQWPHVRGWRFANVEPSLICLTDAKKVADLLALAISQNAAVTSGHSRLAHNDTVPQGAVSASVEAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAR7</accession>
    <name>A0A0M7AAR7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">2'-deoxycytidine 5'-triphosphate deaminase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02987</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71959.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672489.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02987"/>
    <dbReference type="EnsemblBacteria" id="CTQ71959">
        <property type="protein sequence ID" value="CTQ71959"/>
        <property type="gene ID" value="LAX5112_02987"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008829">
        <property type="term" value="F:dCTP deaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009394">
        <property type="term" value="P:2'-deoxyribonucleotide metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.70.40.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010550">
        <property type="entry name" value="dCTP_deam_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036157">
        <property type="entry name" value="dUTPase-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06559">
        <property type="entry name" value="DCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51283">
        <property type="entry name" value="SSF51283"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ71959.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="378" mass="40632" checksum="3C906E7C14055A34" modified="2015-12-09" version="1">MNVSADQTTTGSALIAASGILPERVIQAMFAAQEISAAQPPVKGQVQPASLDLRLGTVAYRVRASFLPGPDIKVADRLEQLKLHTIDLQDGAVLETGCVYIVPLQESLALRPDISATANPKSSTGRLDVFTRVITDNGQAFDTIPAGYTGPLYAEISPLTFPILVRSGSRLSQVRFRRGQSLIPDADLQGIHKSETLMSGGNERIGGGVQLSIDLEGEGPGSLIGYRAKHHSGLIDVDLVGAQDPLDFWEPIYRRNNAELILDPDAFYILVSQEAVHVPPDYAAEMVPFDPLVGEFRVHYAGFFDPGFGHAGAGGVGSRAVLEVRSHDVPFIVEHGQTIGRLVYEHMAERPATLYGEGIGSNYQGQALKLSKHFKASA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAS0</accession>
    <name>A0A0M7AAS0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Chemotaxis protein MotB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">motB</name>
        <name evidence="8" type="ORF">LAX5112_03111</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the MotB family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72245.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008191608.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03111"/>
    <dbReference type="EnsemblBacteria" id="CTQ72245">
        <property type="protein sequence ID" value="CTQ72245"/>
        <property type="gene ID" value="LAX5112_03111"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd07185">
        <property type="entry name" value="OmpA_C-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025713">
        <property type="entry name" value="MotB_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006665">
        <property type="entry name" value="OmpA-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036737">
        <property type="entry name" value="OmpA-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13677">
        <property type="entry name" value="MotB_plug"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00691">
        <property type="entry name" value="OmpA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103088">
        <property type="entry name" value="SSF103088"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51123">
        <property type="entry name" value="OMPA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="15"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="domain" description="OmpA-like" evidence="7">
        <location>
            <begin position="154"/>
            <end position="275"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="94"/>
            <end position="115"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008914"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00473"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ72245.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="284" mass="31748" checksum="B1EDA093EECF6481" modified="2015-12-09" version="1">MARKKPQGGGGAPDWLVTFADLMSLLVCFFVLIISFSIQDKEKLQVVAGSMREAFGVKDSSRKTGIIEVEGIPIRDYMKDISQVEQELDSDFAQERHEKRRKQGPEANTHDTMEAEIEKPRQFATAAASLRQAWQEMPEITEVSTNIILEETEEGLNIMLVDQDGRSMFREGSKYPYETTRRLIAQMAPVLSRMPNRIEITGHTTAGAATVDPSYTGWDLSTERANVARQILSEYGVPDGQFYSVVGKSDTEPLFPNDPYLAANRRVGILLMAEEPPIPPGHKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AB18</accession>
    <name>A0A0M7AB18_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Pseudouridine synthase</fullName>
            <ecNumber evidence="3">5.4.99.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">rluA</name>
        <name evidence="5" type="ORF">LAX5112_03148</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Responsible for synthesis of pseudouridine from uracil.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>a uridine in RNA = a pseudouridine in RNA</text>
            <dbReference type="Rhea" id="RHEA:48348"/>
            <dbReference type="Rhea" id="RHEA-COMP:12068"/>
            <dbReference type="Rhea" id="RHEA-COMP:12069"/>
            <dbReference type="ChEBI" id="CHEBI:65314"/>
            <dbReference type="ChEBI" id="CHEBI:65315"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the pseudouridine synthase RluA family.</text>
    </comment>
    <dbReference type="EC" id="5.4.99.-" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72345.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672611.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03148"/>
    <dbReference type="EnsemblBacteria" id="CTQ72345">
        <property type="protein sequence ID" value="CTQ72345"/>
        <property type="gene ID" value="LAX5112_03148"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140098">
        <property type="term" value="F:catalytic activity, acting on RNA"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009982">
        <property type="term" value="F:pseudouridine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034470">
        <property type="term" value="P:ncRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0001522">
        <property type="term" value="P:pseudouridine synthesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd02869">
        <property type="entry name" value="PseudoU_synth_RluA_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020103">
        <property type="entry name" value="PsdUridine_synth_cat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006225">
        <property type="entry name" value="PsdUridine_synth_RluC/D"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006224">
        <property type="entry name" value="PsdUridine_synth_RluC/D_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006145">
        <property type="entry name" value="PsdUridine_synth_RsuA/RluA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00849">
        <property type="entry name" value="PseudoU_synth_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55120">
        <property type="entry name" value="SSF55120"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00005">
        <property type="entry name" value="rluA_subfam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01129">
        <property type="entry name" value="PSI_RLU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0413">Isomerase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PseudoU_synth_2" evidence="4">
        <location>
            <begin position="27"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="active site" evidence="2">
        <location>
            <position position="69"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010876"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR606225-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU362028"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ72345.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="223" mass="25220" checksum="25E5C4734D3AD227" modified="2015-12-09" version="1">MSPSAPAIFVYDPPREPFLDVLHVDADLLVVDKPSGLLSVPGKALEHSDCIEARAQQTHPEARIVHRLDMDTSGVMVLAMNAQAHRHLGLQFERRKTEKTYVAEVWGQIEKNAGEIDLPLVCDWPNRPKQMVSFEHGKPALTRWQVIMRNERTTRVRLFPFTGRSHQLRVHMLSLGHPIVGDRFYATGDALEASPRLRLHAESLTLHHPTGGKRVTFETACEF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AB31</accession>
    <name>A0A0M7AB31_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03142</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72328.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03142"/>
    <dbReference type="EnsemblBacteria" id="CTQ72328">
        <property type="protein sequence ID" value="CTQ72328"/>
        <property type="gene ID" value="LAX5112_03142"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021848">
        <property type="entry name" value="DUF3445"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11927">
        <property type="entry name" value="DUF3445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ72328.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="319" mass="36253" checksum="7BE78EFE68E9B2CF" modified="2015-12-09" version="1">MSWKLWTRPEKRSALMSQETIRFQHTPYDGSSHPFTVGLKPISEGEWLEPDAFLVPHLAEKDRLVSERRDAVFRAEDGTEEAQQEVLALIVENLKRYHSKTHKFVANRAVIADRGPVVDLSSKPVLLTAARLVQEDLVLMRPGPDGYRLAAASLSFPSSWSLAEKFSKSMSAIHETVPGFNGKRMGAMVARLFDNLKVGQYVCRFNWSIYPDDELYNPKPHRIDLRDSDSVLSRLFLRVERQTLRRLPGSGDIIFTIKIHHDPLRALEAHPDREQLAGQLRTQLMVLDPDQLRYKGLANARDELARALSELFTSEAGVM</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABN9</accession>
    <name>A0A0M7ABN9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Nitronate monooxygenase</fullName>
            <ecNumber evidence="2">1.13.12.16</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02885</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.13.12.16" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71620.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672435.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02885"/>
    <dbReference type="EnsemblBacteria" id="CTQ71620">
        <property type="protein sequence ID" value="CTQ71620"/>
        <property type="gene ID" value="LAX5112_02885"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018580">
        <property type="term" value="F:nitronate monooxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd04730">
        <property type="entry name" value="NPD_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004136">
        <property type="entry name" value="NMO"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03060">
        <property type="entry name" value="NMO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0503">Monooxygenase</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NMO" evidence="1">
        <location>
            <begin position="3"/>
            <end position="309"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03060"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71620.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="331" mass="35388" checksum="A90900AC52AF21E3" modified="2015-12-09" version="1">MKTRITELFGIEHPIIQGGMHYVGFAELAAAVSNAGGLGTITGLTQKTPEALANEIAKCRDLTDKPFAVNLTFLPTVNAPDYPGYVKAIIQGGVKVVETAGRNPQQVMPYLKDAGIKVIHKCTSVRHSLKAQSIGCDAVSVDGFECGGHPGEDDIPNMILLPRAADELEIPFVSSGGMADARSLVASLAMGAEGMNMGTRFIATKEAPVHQRVKDAIVAASELDTRLVMRPLRNTERVLNNAAVERLLEKEKSLGDDLKFEDIIEEVAGVYPKIMMDGEMDAGAWSCGMVAGLIEDIPTCKELIDRIMSEADALIRQRLEGMVGGVAVAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABV5</accession>
    <name>A0A0M7ABV5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Fatty acid desaturase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03245</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72615.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03245"/>
    <dbReference type="EnsemblBacteria" id="CTQ72615">
        <property type="protein sequence ID" value="CTQ72615"/>
        <property type="gene ID" value="LAX5112_03245"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006629">
        <property type="term" value="P:lipid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005804">
        <property type="entry name" value="FA_desaturase_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00487">
        <property type="entry name" value="FA_desaturase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FA_desaturase" evidence="1">
        <location>
            <begin position="59"/>
            <end position="297"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00487"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72615.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="333" mass="37682" checksum="7B7FEEC33225D075" modified="2015-12-09" version="1">MQRANSASSQNHFDFSKCIRYLGENVPLGKTCEWPTLGLIIATTAAWTLLISSYSDWGGWIVCPLAVLLVTLQSSLQHEVLHGHPTRNAVLNEALIYCSFGLFIPYRRFKTLHLRHHNDDRLTDPYDDPESFYLAWGDWQKMPKVLRVVLTLNNTLAGRLLIGPAVSLVGFYGSEFRAVASGDKGVARAWAHHVAGLVLVLAFVSIVGGIPPWFYVLAVAYPGMSLLMLRTYAEHRAHESAEARSVIVEFCPLFSLLFLNNNLHIVHHSHPRAPWYTLPKLYRDARDEWQVRNQGYVFKSYLEMAKAFLFKVKEPVPHPLHRTVNADRAVPPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AC86</accession>
    <name>A0A0M7AC86_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">PhoH-like protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">ybeZ</name>
        <name evidence="6" type="ORF">LAX5112_02792</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the PhoH family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71353.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02792"/>
    <dbReference type="EnsemblBacteria" id="CTQ71353">
        <property type="protein sequence ID" value="CTQ71353"/>
        <property type="gene ID" value="LAX5112_02792"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003714">
        <property type="entry name" value="PhoH"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02562">
        <property type="entry name" value="PhoH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PhoH" evidence="5">
        <location>
            <begin position="135"/>
            <end position="338"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="344"/>
            <end position="373"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="344"/>
            <end position="367"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010393"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF02562"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ71353.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="373" mass="40786" checksum="1EBB23F4D2DA4425" modified="2015-12-09" version="1">MTRDSQSSSRRLSDEAASASDMTHIVLAFEDNRLIGDLFGQFDQNLALIEQRLGVDAIARGNQVTLKGSQAGCTQARVALEALYQRLLQGQEIHPGDVDGALRMAAANEAQLPLPTLEPKSRLAFAQIATRRKTIVARTPTQDAYIRSMDRADMIFGTGPAGTGKTFLAVAYAAALLERGDVARLILSRPAVEAGERLGFLPGEMKDKVDPYLRPIYDALYEMMPAEKVDRGLQSGMIEVAPLAFMRGRTLSNAVVLLDEAQNTTSMQMKMFLTRLGEGSKMIVTGDPSQIDLPSGQKSGLREALGLLTDIPAVAHIRFNETDVVRHELVGRIVTAYDNAAREESEARERRFAARQRDGEDQDRRPRSSAAAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACG9</accession>
    <name>A0A0M7ACG9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Membrane-bound lytic murein transglycosylase B</fullName>
            <ecNumber evidence="3">4.2.2.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">mltB_4</name>
        <name evidence="3" type="ORF">LAX5112_02824</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="4.2.2.-" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71443.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672356.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02824"/>
    <dbReference type="EnsemblBacteria" id="CTQ71443">
        <property type="protein sequence ID" value="CTQ71443"/>
        <property type="gene ID" value="LAX5112_02824"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023346">
        <property type="entry name" value="Lysozyme-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043426">
        <property type="entry name" value="MltB-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011970">
        <property type="entry name" value="MltB_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031304">
        <property type="entry name" value="SLT_2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30163">
        <property type="entry name" value="PTHR30163"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13406">
        <property type="entry name" value="SLT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53955">
        <property type="entry name" value="SSF53955"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02283">
        <property type="entry name" value="MltB_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0456">Lyase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809400" evidence="1">
        <location>
            <begin position="26"/>
            <end position="404"/>
        </location>
    </feature>
    <feature type="domain" description="SLT_2" evidence="2">
        <location>
            <begin position="32"/>
            <end position="336"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13406"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ71443.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="404" mass="44348" checksum="55F2E699155E22E7" modified="2015-12-09" version="1">MIAKALRLATLALSLSILPSGLAIAGQYDQQFRQFLASAVVPAARQAGVSQSTLDRELRGLTPDTSLPGLVGPGGKGAPPKVNFQAEFRSPARYFRNSQFNALVPAGRRLMQKHASTLQMIETRYGVPKRIILAIWARESGYGGAKIPHDAVRVLATRAFMGQRADFFKGELIAALQILQNGDVSRKTLRSSWGGAMGQPQFLPSSYLKYAVDFDGDGRRNIWTSEVDTMASIANYLAKHGWVSGRDWGYEVRLPNTVSCTREGPDNRQTISQFVAEGVKRVSGRPFPNHEINQPGNILLPAGRYGPAFIATENFYVIKEYNESDTYALFVGHLADRYGSNKSFVGDWKPMKDTTRGAVRNLQLRLEGDGHDVGGADGLIGFKTRRSIGKDQEKNGFFATCWAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACH6</accession>
    <name>A0A0M7ACH6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03232</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72579.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672657.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03232"/>
    <dbReference type="EnsemblBacteria" id="CTQ72579">
        <property type="protein sequence ID" value="CTQ72579"/>
        <property type="gene ID" value="LAX5112_03232"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019285">
        <property type="entry name" value="DUF2336"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10098">
        <property type="entry name" value="DUF2336"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ72579.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="371" mass="40890" checksum="14E8A69140284D0A" modified="2015-12-09" version="1">MSVTLLKLAEEGTDSARAALFGELCRLVTDDLDQRTTPELTIFAEVTLKLYSDATADDRVRLAQKLSNCPDIPDTLAKKIAEDDAPIASSLLASSPVFSQEDLLQFIQELSNAHLQAIAHRPDLSSEVSDALAQKGDTPIHRILAGNREIRLSRDAMVCLVRLAAEDSKVRDSLSHRSDLTPAICQQLLPMVNEDAKKRLTSIIQGALSQEQLDQIAKIKNLRRELGHALDNNDMSLLWPDARRAGATPDELVTLLLQDQRFNHVVELMSLRGRIAQKAFKDAVFNGKLQTVMRTAARCGLQPQTFSLFVKARCAHLRIPAKKGSSWIGAYAAHLKELEASKESRCSDFQANRKGRKSEASATVSSRLAFA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACI2</accession>
    <name>A0A0M7ACI2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Adenylate cyclase 1</fullName>
            <ecNumber evidence="2">4.6.1.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">cyaA_12</name>
        <name evidence="2" type="ORF">LAX5112_03320</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="4.6.1.1" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72825.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03320"/>
    <dbReference type="EnsemblBacteria" id="CTQ72825">
        <property type="protein sequence ID" value="CTQ72825"/>
        <property type="gene ID" value="LAX5112_03320"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004016">
        <property type="term" value="F:adenylate cyclase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009190">
        <property type="term" value="P:cyclic nucleotide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035556">
        <property type="term" value="P:intracellular signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07302">
        <property type="entry name" value="CHD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1230">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001054">
        <property type="entry name" value="A/G_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00211">
        <property type="entry name" value="Guanylate_cyc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00044">
        <property type="entry name" value="CYCc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50125">
        <property type="entry name" value="GUANYLATE_CYCLASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Guanylate cyclase" evidence="1">
        <location>
            <begin position="197"/>
            <end position="320"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72825.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="366" mass="40101" checksum="95F94A683096ED67" modified="2015-12-09" version="1">MTEGPRQSSPSGLLHSFCLKMRETGVRVDRATLGAPILHPVAKSSFVFWDSETGTHERWFTYAPDQLEMLKASPIHKIYTLGEPSSLRLDQQHQRDLYPIGADLWAEGYHQYEALPLKFSDDTYKVLTLATKSPDGFSETNQRLIEATVPALTLVFEGFIARNTARTLMETYVGQRAGLRVLDGEIARGDGSSIDAVIWFSDLRGFTALAQSRSESDVLKILNGYFGTVTEAIEDQSGEVLKFIGDAILAIFPYEDDVHHAIAKAEAAALKVVNADAFQNDIKFGIGLHTGSVFYGNVGGGNRLDFTVIGNSVNIASRIEGLCSSLNMPLLASAEFVGMSTRPWQSHGKHQLKGVCEPLEVFAPTT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACQ4</accession>
    <name>A0A0M7ACQ4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">LIV-I protein F</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">livF_10</name>
        <name evidence="5" type="ORF">LAX5112_03106</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72232.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672585.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03106"/>
    <dbReference type="EnsemblBacteria" id="CTQ72232">
        <property type="protein sequence ID" value="CTQ72232"/>
        <property type="gene ID" value="LAX5112_03106"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="22"/>
            <end position="262"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="55"/>
            <end position="62"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ72232.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="284" mass="31259" checksum="8B5BE7D654510639" modified="2015-12-09" version="1">MALLDVETPNTETAAEPAETILSVNNIEVIYDHVILVLKGVSLTVPKGGIVALLGANGAGKSTTLKAISNLLGAERGDVTKGKILFEGEEVQALSPNDLVRRGCIQVMEGRHCFGHLSIEENLLTGAYTRKDGHAAVKADLEMVYDYFPRLRERRQSQAGYTSGGEQQMCAIGRALMSRPKMILLDEPSMGLAPQLVEEIFEIVRKLNQNEGVSFLLAEQNTNVALKYATYGYIMESGRIVLDGAGKSLLENEDVKEFYLGVGGEGRRSFKDVKHYKRRKRWLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AD40</accession>
    <name>A0A0M7AD40_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Integrase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_03302</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72789.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03302"/>
    <dbReference type="EnsemblBacteria" id="CTQ72789">
        <property type="protein sequence ID" value="CTQ72789"/>
        <property type="gene ID" value="LAX5112_03302"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.443.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011010">
        <property type="entry name" value="DNA_brk_join_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013762">
        <property type="entry name" value="Integrase-like_cat_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002104">
        <property type="entry name" value="Integrase_catalytic"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00589">
        <property type="entry name" value="Phage_integrase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56349">
        <property type="entry name" value="SSF56349"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51898">
        <property type="entry name" value="TYR_RECOMBINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tyr recombinase" evidence="3">
        <location>
            <begin position="190"/>
            <end position="391"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="386"/>
            <end position="418"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="386"/>
            <end position="410"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ72789.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="418" mass="47509" checksum="0264ACEA3633FA22" modified="2015-12-09" version="1">MPRPSKPARLWLRPARKAKNGNSVKQAVYLILDAGKQISTGCGPDDRRGAEEAISRYIAEKTRQETTRSTRRKTAEELSIAVVLARYMEVKGTKVARPNELGQRVKRLLEFWTDRTCDHISSVTCNDYVAFRSGKVWASATDASNPRPRKTTTAGARRELEDLRAAIGLATADGILSEPVRVFLPPENPNREEWLTEEEVEHLCQIARDTREVQTVHKGARKGQKVETRKKPLAHVERFIRVAVMTGTRSSAICQASFEREPDRPWIDLENGLFYRKAPGRAEHRNKKYPTIPLAPALVEEMIEWRDSGAQYVVEFNGKPANCRKSFERLIRLAKLDKHVVRHTLRHTAATWMMQEGVDLAEAAGYLGMSLETLQKRYAHHHPDYQKTAASKLAERANRARTDAKRANDWPMKQGEQT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADG2</accession>
    <name>A0A0M7ADG2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Copper outer membrane regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">comR_4</name>
        <name evidence="3" type="ORF">LAX5112_03261</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72661.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672680.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72661">
        <property type="protein sequence ID" value="CTQ72661"/>
        <property type="gene ID" value="LAX5112_03261"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036271">
        <property type="entry name" value="Tet_transcr_reg_TetR-rel_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00440">
        <property type="entry name" value="TetR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48498">
        <property type="entry name" value="SSF48498"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50977">
        <property type="entry name" value="HTH_TETR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH tetR-type" evidence="2">
        <location>
            <begin position="8"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="1">
        <location>
            <begin position="31"/>
            <end position="50"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ72661.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="206" mass="22416" checksum="E68D44FB98F98EA0" modified="2015-12-09" version="1">MPRGRPRKIDPKDALKTAMHTLWERGYDRTSMADLVSATGMAKPGLYANLGDKDEIFQKALRLYQEEIGAPLIKDLVHSPDSLKQSLRTALRGVLHAQEGSGLPEGCFIINNSFSCSAQSEHLKQALQDLNVERRNAFLLRLKRAQTECELPASTDINALADFFAGQAAAISSMAQAGLSPTELDKMIEVSLSVLPEDPPRGGAQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AE61</accession>
    <name>A0A0M7AE61_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Chemotaxis protein CheY</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">cheY_5</name>
        <name evidence="4" type="ORF">LAX5112_03547</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73445.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672910.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03547"/>
    <dbReference type="EnsemblBacteria" id="CTQ73445">
        <property type="protein sequence ID" value="CTQ73445"/>
        <property type="gene ID" value="LAX5112_03547"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="3">
        <location>
            <begin position="15"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="208"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="1">
        <location>
            <position position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ73445.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="229" mass="25906" checksum="1E5EE31F0E93C6F0" modified="2015-12-09" version="1">MKHHAAFGLAMDDIDVVVVEDSKPMQTILRSTLLSFKVARVRTFDSVDDALEASLAEPPNLIITDWRMSPTTGYQLLRLIRHKHMEPLCFVPILFITAHGTRPLVDKALRAGAHHVLVKPLSPSTLHKRIEWVLHDDRPMVLESSGFYNIYGIQKLMDQQAEKMKSLAAARVNHRTAVQKRAEVDDVVQEAFDKKHQQPEEPKIIGRGFAQRAKKQSAASRHIRNGRSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEE3</accession>
    <name>A0A0M7AEE3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">(S)-1-Phenylethanol dehydrogenase</fullName>
            <ecNumber evidence="2">1.1.1.311</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ped</name>
        <name evidence="2" type="ORF">LAX5112_03308</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the short-chain dehydrogenases/reductases (SDR) family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.311" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72802.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672730.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03308"/>
    <dbReference type="EnsemblBacteria" id="CTQ72802">
        <property type="protein sequence ID" value="CTQ72802"/>
        <property type="gene ID" value="LAX5112_03308"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00106">
        <property type="entry name" value="adh_short"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU000363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72802.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="266" mass="28314" checksum="69F780A37D055CDC" modified="2015-12-09" version="1">MKPTAVISGGAGGLGQAFGAILREHGWFTVMLNLPGPDLDALSFVPDTLALSCDITDTGQLTEAAWQIRAERPSIDLVVYNAGVTHIGPFTTQALEDHRKVFEVNYFGAVAMAKAFGPDLRRSKGTHLAISSVAGFCPLALRTAYAGSKHALEGFFKSLRSEEAAHGVACLIAAPSFIATNTGAHSAPGDGLARPGSASDQVDALAPEDAARILYRGFARRKTFIPIGRVAHLSHLINRLSPRLYRHLMERTILQRPAKAEGGAPH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEL6</accession>
    <name>A0A0M7AEL6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Peptidyl-prolyl cis-trans isomerase</fullName>
            <ecNumber evidence="6">5.2.1.8</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">slyD</name>
        <name evidence="8" type="ORF">LAX5112_03565</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 5 6">
            <text>[protein]-peptidylproline (omega=180) = [protein]-peptidylproline (omega=0)</text>
            <dbReference type="Rhea" id="RHEA:16237"/>
            <dbReference type="Rhea" id="RHEA-COMP:10747"/>
            <dbReference type="Rhea" id="RHEA-COMP:10748"/>
            <dbReference type="ChEBI" id="CHEBI:83833"/>
            <dbReference type="ChEBI" id="CHEBI:83834"/>
            <dbReference type="EC" id="5.2.1.8"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the FKBP-type PPIase family.</text>
    </comment>
    <dbReference type="EC" id="5.2.1.8" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73528.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008193857.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03565"/>
    <dbReference type="EnsemblBacteria" id="CTQ73528">
        <property type="protein sequence ID" value="CTQ73528"/>
        <property type="gene ID" value="LAX5112_03565"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003755">
        <property type="term" value="F:peptidyl-prolyl cis-trans isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007049">
        <property type="term" value="P:cell cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.50.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046357">
        <property type="entry name" value="PPIase_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001179">
        <property type="entry name" value="PPIase_FKBP_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00254">
        <property type="entry name" value="FKBP_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50059">
        <property type="entry name" value="FKBP_PPIASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="2" id="KW-0132">Cell division</keyword>
    <keyword evidence="5 6 8" id="KW-0413">Isomerase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 5 6" id="KW-0697">Rotamase</keyword>
    <feature type="domain" description="PPIase FKBP-type" evidence="7">
        <location>
            <begin position="7"/>
            <end position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000971"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003915"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50059"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ73528.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="142" mass="15178" checksum="D76A2EAC10E6FF5E" modified="2015-12-09" version="1">MTEAKQGDTVQLHYKGTLDDGSVFDSSEGREPLEFTVGSGQIITGLDREIPGMKVGDEKTVTIAAEDAYGPHNPDAQQTVPRTQIPENVPLEIGMQLQGQTADGQVMSVVVVSFDDDQVVLDANHPLAGKNLTFAIQLTGIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEQ0</accession>
    <name>A0A0M7AEQ0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">4-oxalomesaconate tautomerase</fullName>
            <ecNumber evidence="3">5.3.2.8</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">galD</name>
        <name evidence="3" type="ORF">LAX5112_03425</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the PrpF family.</text>
    </comment>
    <dbReference type="EC" id="5.3.2.8" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73107.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672836.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03425"/>
    <dbReference type="EnsemblBacteria" id="CTQ73107">
        <property type="protein sequence ID" value="CTQ73107"/>
        <property type="gene ID" value="LAX5112_03425"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007400">
        <property type="entry name" value="PrpF_protein"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43709">
        <property type="entry name" value="PTHR43709"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04303">
        <property type="entry name" value="PrpF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3" id="KW-0413">Isomerase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007673"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ73107.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="363" mass="38106" checksum="74A97FFE1C437B60" modified="2015-12-09" version="1">MMQTSTPFIFMRGGSSRGPYLKRSDLPENLDDLSNVLTSIVGAGHPFNIDGIGGGTAVTTKIAMLSKSDDDWADVDYFFAQVGVEEKLVDYKPSCGNILVGVGPAAIEMGLVEPTGDVTEVRIRAVNTGTLVSELVQTPGGVVQYDGNAAIDGVPGTAAPIQLRFMKVEGSLTGALFPTGSRTEVINGVTVSCMDVAMPMVIGLASDFGITGYESAADLDSNKDLFAKMEAVRLIAGERMGLGDVTKSVTPKFGLLAPSKGGGSACVRYFMPWKCHPTLAVTGSQCLAACLLAPGTVAEGLLKPPPGAPADLKLEHPMGMMEVVIDYKDENGHFEVTSAGLLRTARKLATGEVFIPGSVWQRN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AF03</accession>
    <name>A0A0M7AF03_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Isoprenyl transferase</fullName>
            <ecNumber evidence="2">2.5.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">uppS</name>
        <name evidence="3" type="ORF">LAX5112_03460</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="2">Binds 2 magnesium ions per subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the UPP synthase family.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73207.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008191788.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03460"/>
    <dbReference type="EnsemblBacteria" id="CTQ73207">
        <property type="protein sequence ID" value="CTQ73207"/>
        <property type="gene ID" value="LAX5112_03460"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004659">
        <property type="term" value="F:prenyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00475">
        <property type="entry name" value="Cis_IPPS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1180.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01139">
        <property type="entry name" value="ISPT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001441">
        <property type="entry name" value="UPP_synth-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018520">
        <property type="entry name" value="UPP_synth-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036424">
        <property type="entry name" value="UPP_synth-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10291">
        <property type="entry name" value="PTHR10291"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01255">
        <property type="entry name" value="Prenyltransf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64005">
        <property type="entry name" value="SSF64005"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00055">
        <property type="entry name" value="uppS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01066">
        <property type="entry name" value="UPP_SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0460">Magnesium</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2 3" id="KW-0808">Transferase</keyword>
    <feature type="region of interest" description="Substrate binding" evidence="2">
        <location>
            <begin position="31"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="2">
        <location>
            <begin position="75"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="2">
        <location>
            <begin position="204"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="active site" evidence="2">
        <location>
            <position position="30"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="2">
        <location>
            <position position="78"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="30"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="35"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="43"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="47"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="79"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="81"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="198"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="217"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01139"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ73207.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="255" mass="28646" checksum="21A8230F0B19D9A0" modified="2015-12-09" version="1">MSSNLERQANAEPVSAAPSHVPNHVAFIMDGNGRWASSRGLPRTEGHRQGLEALRKIIRHAALRGVGIVTIYSFSTENWSRPEPEVRFLMGLLRRFVQRDLSELHRENIRIRIIGERDNLDAGILKLLLDAEELTRNNTGMELVVAFNYGARQELTAAVKKLCEKVARGEIEPSAISESHISAELDTVGLPDPDLIVRTSGELRLSNFLLWQAAYTEFYFSDLMWPDFDEAALDQALECFGNRDRRYGGVTAQAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFM6</accession>
    <name>A0A0M7AFM6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Tetratricopeptide repeat</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_03678</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ73878.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673025.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03678"/>
    <dbReference type="EnsemblBacteria" id="CTQ73878">
        <property type="protein sequence ID" value="CTQ73878"/>
        <property type="gene ID" value="LAX5112_03678"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013105">
        <property type="entry name" value="TPR_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_repeat"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07719">
        <property type="entry name" value="TPR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00028">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="SSF48452"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50005">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0802">TPR repeat</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809406" evidence="3">
        <location>
            <begin position="23"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="repeat" description="TPR" evidence="1">
        <location>
            <begin position="96"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="24"/>
            <end position="46"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00339"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ73878.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="182" mass="19939" checksum="DE3D6A3B3D26DFC0" modified="2015-12-09" version="1">METRGASLVVLIVLGLNGAAFAVPSDTEDLPPKPTQTSTECPDGKAWDKESNRCTDIKSDLFDDNDRFLAARELAYAGRLTASAQALDSIREQDRPRVLTYRGFLARKAGDWPEAEKYYLAALSVDPDSLMTRSYMGMGLFERGDKAGAIGQLREIRARGGRGGWPERALLMAMRAGGKTSY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFV0</accession>
    <name>A0A0M7AFV0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Cyclolysin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">cya_2</name>
        <name evidence="3" type="ORF">LAX5112_03493</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73296.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672875.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03493"/>
    <dbReference type="EnsemblBacteria" id="CTQ73296">
        <property type="protein sequence ID" value="CTQ73296"/>
        <property type="gene ID" value="LAX5112_03493"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025592">
        <property type="entry name" value="DUF4347"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018511">
        <property type="entry name" value="Hemolysin-typ_Ca-bd_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001343">
        <property type="entry name" value="Hemolysn_Ca-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011049">
        <property type="entry name" value="Serralysin-like_metalloprot_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14252">
        <property type="entry name" value="DUF4347"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00353">
        <property type="entry name" value="HemolysinCabind"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51120">
        <property type="entry name" value="SSF51120"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00330">
        <property type="entry name" value="HEMOLYSIN_CALCIUM"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF4347" evidence="2">
        <location>
            <begin position="9"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="466"/>
            <end position="489"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1589"/>
            <end position="1609"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF14252"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ73296.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="2060" mass="205030" checksum="A03E72DB1A59BFC2" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="34" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFZ4</accession>
    <name>A0A0M7AFZ4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="12">sn-glycerol-3-phosphate import ATP-binding protein UgpC</fullName>
            <ecNumber evidence="12">3.6.3.20</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">ugpC_3</name>
        <name evidence="12" type="ORF">LAX5112_03576</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Peripheral membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.20" evidence="12"/>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73557.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672937.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03576"/>
    <dbReference type="EnsemblBacteria" id="CTQ73557">
        <property type="protein sequence ID" value="CTQ73557"/>
        <property type="gene ID" value="LAX5112_03576"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015430">
        <property type="term" value="F:ABC-type glycerol-3-phosphate transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008643">
        <property type="term" value="P:carbohydrate transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0001407">
        <property type="term" value="P:glycerophosphodiester transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03301">
        <property type="entry name" value="ABC_MalK_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015855">
        <property type="entry name" value="ABC_transpr_MalK-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008995">
        <property type="entry name" value="Mo/tungstate-bd_C_term_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013611">
        <property type="entry name" value="Transp-assoc_OB_typ2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017922">
        <property type="entry name" value="UgpC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43875:SF12">
        <property type="entry name" value="PTHR43875:SF12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08402">
        <property type="entry name" value="TOBE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50331">
        <property type="entry name" value="SSF50331"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 10 12" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="5" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="12" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="9" id="KW-0472">Membrane</keyword>
    <keyword evidence="7 10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0762">Sugar transport</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ABC transporter" evidence="11">
        <location>
            <begin position="4"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <begin position="37"/>
            <end position="44"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022519"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022597"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ73557.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="358" mass="38610" checksum="33F4E8AEC9608113" modified="2015-12-09" version="1">MSTITLDTVRKVYAGNVEAVKGVSIDIADGEFIVLVGPSGCGKSTLLRMVAGLEDITTGEIKIGDRLVNNVDPADRDIAMVFQNYALYPHMSVYNNLAYGLKNRGMDKAEIDRRVKEAARILEIGDYLDRKPRALSGGQRQRVAMGRAIVREPAAFLFDEPLSNLDAKLRVQMRVEIKRLQRTLGTTSVYVTHDQLEAMTLADRLVVLNGGNIEQIGAPIDVYDKPASTFVASFIGSPAMNLLDVAANGSGLALKTGSGLSGTNTKGKDAYKIGIRPEHLAVVEGPHSGDGIGLEVTVNVLEPVGAESYVYASLEDGGPEIVIRVSSHARHEPGETMYLAATPEDVHFFDAETGKRID</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AG91</accession>
    <name>A0A0M7AG91_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03599</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73621.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ73621">
        <property type="protein sequence ID" value="CTQ73621"/>
        <property type="gene ID" value="LAX5112_03599"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.443.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011010">
        <property type="entry name" value="DNA_brk_join_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013762">
        <property type="entry name" value="Integrase-like_cat_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56349">
        <property type="entry name" value="SSF56349"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73621.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="95" mass="11189" checksum="8135BA6CAE8A0A9A" modified="2015-12-09" version="1">MTRRWPSMLVPGHDPSGACPQAPEVINFKLHDLRHEDFSRMAARDVDLKTIIMLQSGHKTPAMLLRYLNPTTKERSHKLFWGERMMDKHTYLFVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGH7</accession>
    <name>A0A0M7AGH7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 10">ATP-dependent Clp protease proteolytic subunit</fullName>
            <ecNumber evidence="5 8">3.4.21.92</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Endopeptidase Clp</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="primary">clpP_2</name>
        <name evidence="5" type="synonym">clpP</name>
        <name evidence="11" type="ORF">LAX5112_03502</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5 9">Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Fourteen ClpP subunits assemble into 2 heptameric rings which stack back to back to give a disk-like structure with a central cavity, resembling the structure of eukaryotic proteasomes.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 5 10">Belongs to the peptidase S14 family.</text>
    </comment>
    <dbReference type="EC" id="3.4.21.92" evidence="5 8"/>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73320.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008195788.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03502"/>
    <dbReference type="EnsemblBacteria" id="CTQ73320">
        <property type="protein sequence ID" value="CTQ73320"/>
        <property type="gene ID" value="LAX5112_03502"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004176">
        <property type="term" value="F:ATP-dependent peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004252">
        <property type="term" value="F:serine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd07017">
        <property type="entry name" value="S14_ClpP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00444">
        <property type="entry name" value="ClpP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001907">
        <property type="entry name" value="ClpP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029045">
        <property type="entry name" value="ClpP/crotonase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023562">
        <property type="entry name" value="ClpP/TepA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033135">
        <property type="entry name" value="ClpP_His_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018215">
        <property type="entry name" value="ClpP_Ser_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10381">
        <property type="entry name" value="PTHR10381"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00574">
        <property type="entry name" value="CLP_protease"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00127">
        <property type="entry name" value="CLPPROTEASEP"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52096">
        <property type="entry name" value="SSF52096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00382">
        <property type="entry name" value="CLP_PROTEASE_HIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00381">
        <property type="entry name" value="CLP_PROTEASE_SER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 5 8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 5 8" id="KW-0645">Protease</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5 8" id="KW-0720">Serine protease</keyword>
    <feature type="active site" evidence="6">
        <location>
            <position position="107"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="5">
        <location>
            <position position="107"/>
        </location>
    </feature>
    <feature type="active site" evidence="5 7">
        <location>
            <position position="132"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007039"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00444"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10086"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU000549"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU000550"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU003567"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ73320.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="213" mass="23566" checksum="090A93EEC79610FF" modified="2015-12-09" version="1">MKDPVDIYMNTLVPMVVEQTNRGERAFDIYSRLLKERIIFLTGPVEDHMATLVSAQLLYLEADNPSKEIAIYINSPGGLVTSGLAIYDTMQFIRPSVSTLCIGQAASMGSLLLAAGEKDMRFILPNARVMVHQPSGGFRGQAADIMLHAQEILAMKRRLNEIYVKHTGRSLDQVEEALERDNFMTAEKAKEFGIVDSVITDRTSLGGENESKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHG2</accession>
    <name>A0A0M7AHG2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Heme NO binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03911</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74585.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673213.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03911"/>
    <dbReference type="EnsemblBacteria" id="CTQ74585">
        <property type="protein sequence ID" value="CTQ74585"/>
        <property type="gene ID" value="LAX5112_03911"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1520.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038158">
        <property type="entry name" value="H-NOX_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011644">
        <property type="entry name" value="Heme_NO-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024096">
        <property type="entry name" value="NO_sig/Golgi_transp_ligand-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07700">
        <property type="entry name" value="HNOB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF111126">
        <property type="entry name" value="SSF111126"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HNOB" evidence="1">
        <location>
            <begin position="3"/>
            <end position="161"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07700"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74585.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="181" mass="20655" checksum="B587485FC1FE8007" modified="2015-12-09" version="1">MLGVVFTEFMEMVEDEFSFDVADEIMEISGVGVETGFTAVQEYSHTDMVKLVAALHKVTGMDIDALITAFGQHLFQRFTVTHSQFFSGATCSLDFLENIEGYIHVEVKKLYPNAELPTFRCIRHAPDKLEMNYKSKRPFGDLAHGLIRGCGKHFKDELDIERTDRNGLHEVQFMVCRKRPV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIM4</accession>
    <name>A0A0M7AIM4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">RES domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03550</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the MbcT/ParT/Res family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73454.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672912.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ73454">
        <property type="protein sequence ID" value="CTQ73454"/>
        <property type="gene ID" value="LAX5112_03550"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014914">
        <property type="entry name" value="RES_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08808">
        <property type="entry name" value="RES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00953">
        <property type="entry name" value="RES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RES" evidence="2">
        <location>
            <begin position="76"/>
            <end position="201"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009682"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00953"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ73454.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="230" mass="25390" checksum="95D1C9432E55C50A" modified="2015-12-09" version="1">MPHIRRVTWARTFRIIRSLYPPIDLFEDIADPKDWEALASVEAKTNPRVRGEIGDLGKVPVHRRISGPGASYVMAPFVHCSPLRPGRFSDGSYGIYYAGNSEDVALAETIYHHARFMASTREDAGWTSQFRLLVGSVDADLTDVNDLPGVLHVSDYSLSQKAGAEIRASGSDGLVWNSVRCPGGECLGAFWPDVVSVPVQSSHFSYHWSGNRVDFVKRLDTGEVLEVTDP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIZ8</accession>
    <name>A0A0M7AIZ8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Inositol-1-monophosphatase</fullName>
            <ecNumber evidence="3">3.1.3.25</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">suhB_4</name>
        <name evidence="3" type="ORF">LAX5112_03855</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.3.25" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74412.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008191177.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03855"/>
    <dbReference type="EnsemblBacteria" id="CTQ74412">
        <property type="protein sequence ID" value="CTQ74412"/>
        <property type="gene ID" value="LAX5112_03855"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008934">
        <property type="term" value="F:inositol monophosphate 1-phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052832">
        <property type="term" value="F:inositol monophosphate 3-phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052833">
        <property type="term" value="F:inositol monophosphate 4-phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046855">
        <property type="term" value="P:inositol phosphate dephosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020583">
        <property type="entry name" value="Inositol_monoP_metal-BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000760">
        <property type="entry name" value="Inositol_monophosphatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022337">
        <property type="entry name" value="Inositol_monophosphatase_SuhB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00459">
        <property type="entry name" value="Inositol_P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00377">
        <property type="entry name" value="IMPHPHTASES"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01959">
        <property type="entry name" value="SBIMPHPHTASE"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00629">
        <property type="entry name" value="IMP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0460">Magnesium</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ74412.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="266" mass="27810" checksum="319C402767C93234" modified="2015-12-09" version="1">MSSDRLAFTEALAQKAGLVALDYFRKLDTLTITQKGHQDLVSEADRNVETLIRDALSEAYPDDGILGEEHGMEEGDSGFTWVIDPIDGTANFVTGIPQWCVIIACVQQGQTLLGVIHDPVAGETFSALAGGGAFLNGKPIKVSDSESVSVGSVGVGFNGRTSVTDAVNAVGALVSKGGVFFRNASGGLMLAYTGAGRLIGYIESHMNAWDCLAGMLLIQEAGGRVQEQDIAKALYHGTRVVTGAPGVFAELTDIAESSFAPLQAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJ46</accession>
    <name>A0A0M7AJ46_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Regulatory protein AsnC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">asnC_2</name>
        <name evidence="5" type="ORF">LAX5112_03815</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74260.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673122.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03815"/>
    <dbReference type="EnsemblBacteria" id="CTQ74260">
        <property type="protein sequence ID" value="CTQ74260"/>
        <property type="gene ID" value="LAX5112_03815"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000485">
        <property type="entry name" value="AsnC-type_HTH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019888">
        <property type="entry name" value="Tscrpt_reg_AsnC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019887">
        <property type="entry name" value="Tscrpt_reg_AsnC/Lrp_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01037">
        <property type="entry name" value="AsnC_trans_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13404">
        <property type="entry name" value="HTH_AsnC-type"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00033">
        <property type="entry name" value="HTHASNC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00344">
        <property type="entry name" value="HTH_ASNC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50956">
        <property type="entry name" value="HTH_ASNC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH asnC-type" evidence="4">
        <location>
            <begin position="1"/>
            <end position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50956"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ74260.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="153" mass="17019" checksum="4ACB868BA7B6E803" modified="2015-12-09" version="1">MDDLDTRLISLLRHDGRRSVSDLAIDLRVSRATVRSRMEKLVETGEILGFTAVLRDDWRDLPIRAVTLVHVDGRNTDPVSKALAAMTEVRAIHSTNGKWDLVLEIATRDLEAFDDALHRIRLIEGIAGTETNILLSTRKGPAVSVDHFKDALG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJT8</accession>
    <name>A0A0M7AJT8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 5">UTP--glucose-1-phosphate uridylyltransferase</fullName>
            <ecNumber evidence="3 5">2.7.7.9</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">UDP-glucose pyrophosphorylase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="primary">gtaB_2</name>
        <name evidence="7" type="ORF">LAX5112_04029</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 5">
            <text>alpha-D-glucose 1-phosphate + H(+) + UTP = diphosphate + UDP-alpha-D-glucose</text>
            <dbReference type="Rhea" id="RHEA:19889"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:46398"/>
            <dbReference type="ChEBI" id="CHEBI:58601"/>
            <dbReference type="ChEBI" id="CHEBI:58885"/>
            <dbReference type="EC" id="2.7.7.9"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the UDPGP type 2 family.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.9" evidence="3 5"/>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ74907.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673320.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04029"/>
    <dbReference type="EnsemblBacteria" id="CTQ74907">
        <property type="protein sequence ID" value="CTQ74907"/>
        <property type="gene ID" value="LAX5112_04029"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003983">
        <property type="term" value="F:UTP:glucose-1-phosphate uridylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009058">
        <property type="term" value="P:biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006011">
        <property type="term" value="P:UDP-glucose metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd02541">
        <property type="entry name" value="UGPase_prokaryotic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005771">
        <property type="entry name" value="GalU_uridylyltTrfase_bac/arc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005835">
        <property type="entry name" value="NTP_transferase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43197">
        <property type="entry name" value="PTHR43197"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00483">
        <property type="entry name" value="NTP_transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01099">
        <property type="entry name" value="galU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 7" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="NTP_transferase" evidence="6">
        <location>
            <begin position="8"/>
            <end position="268"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000872"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006890"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012415"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00019048"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU361259"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00483"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ74907.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="297" mass="32514" checksum="FBB13D90D59B8C72" modified="2015-12-09" version="1">MTKPIRKAILPVAGLGTRFLPATKAVPKEMLTIVDRPIIQYVVDEARAAGIEHIVFVTGRNKQVIEDHFDVAYELEDTLKARNKTAALDLLEKHRPIPGSTSFTRQQAPLGLGHAIWCARDIIGDEPFAILLPDVIIKSKVSCLKQMVDLYNGTGGNVLAVEEVPDDQTQNYGIVELAEKINENAAHISNMVEKPAPGTAPSNLMITGRYILQPQIFDLLSKQDTGAGGEIQLTDSMLKLMETQPFSSIKFEGRSFDCGSKAGFLSANIAFGLDDPKLASEILPFMREMLDQPEAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AK55</accession>
    <name>A0A0M7AK55_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Flagellin</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">fliC</name>
        <name evidence="6" type="ORF">LAX5112_04091</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Secreted</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="3">Bacterial flagellum</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the bacterial flagellin family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ75027.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673359.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04091"/>
    <dbReference type="EnsemblBacteria" id="CTQ75027">
        <property type="protein sequence ID" value="CTQ75027"/>
        <property type="gene ID" value="LAX5112_04091"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009288">
        <property type="term" value="C:bacterial-type flagellum"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005198">
        <property type="term" value="F:structural molecule activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001492">
        <property type="entry name" value="Flagellin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046358">
        <property type="entry name" value="Flagellin_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001029">
        <property type="entry name" value="Flagellin_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42792">
        <property type="entry name" value="PTHR42792"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00700">
        <property type="entry name" value="Flagellin_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00669">
        <property type="entry name" value="Flagellin_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3" id="KW-0975">Bacterial flagellum</keyword>
    <keyword evidence="6" id="KW-0966">Cell projection</keyword>
    <keyword evidence="6" id="KW-0969">Cilium</keyword>
    <keyword evidence="6" id="KW-0282">Flagellum</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0964">Secreted</keyword>
    <feature type="domain" description="Flagellin_N" evidence="4">
        <location>
            <begin position="6"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="domain" description="Flagellin_C" evidence="5">
        <location>
            <begin position="245"/>
            <end position="329"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005709"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023143"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU362073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00669"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00700"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ75027.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="330" mass="34742" checksum="1BB18744AD983BE4" modified="2015-12-09" version="1">MSSLLTNSSAMTALQTLSMTNKNMATTQNRISTGLRVNDAADNAAYWSIATTMRSDVGALSAVQDSLGLGAATLDVTFTAINSTVDTLNEIKEKLVAAKGQTDSGREKIQEDISNLQKQLETYANSAVTSSGDNWLVRDPATQDMQPDVVGSFTRNSDGSTRIEQITVDLANVFLIDSAADTGLLDSDMVADIQTAADAAATADGGTPPVDLSRLTGGTASILTIDISNLDESANDKYVVDGLVSVVDQKIAALTDAATTIGSSKKRVDSQMDFVKALSDSYTRGIGQLVDADMNAESTRLQALQTQQQLGIQALSIANQGAQNILSLFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKB3</accession>
    <name>A0A0M7AKB3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Inner membrane ABC transporter permease protein YdcV</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ydcV_3</name>
        <name evidence="7" type="ORF">LAX5112_04113</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ75087.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673371.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04113"/>
    <dbReference type="EnsemblBacteria" id="CTQ75087">
        <property type="protein sequence ID" value="CTQ75087"/>
        <property type="gene ID" value="LAX5112_04113"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="75"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="111"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="155"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="200"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="257"/>
            <end position="279"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="75"/>
            <end position="276"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ75087.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="285" mass="31501" checksum="85D053A85EA0FD74" modified="2015-12-09" version="1">MLATKKTTPFLVGYRLYVVAFFIFLAAPLISAGAFAFNDSLFPALPWQGFTLDWFFSDTEPKLGMFHDRRLLQGLYYSFVIAIFVAGLSVFVGTTNAFLFVRGDFPAKNFFYILMVVPLVIPGVILGISILVLASDTANYVENRFDLELEFLRPGMLLVVLGQFSFIATITSLVITARLKKFDETMEEAAFNLGASRARVLRTVTLPFLRPAMIAAGIVAFLVSFENFNTTLFLVGSEAPLTITMYDRMAKVGSTPVLNAVSFFLMVGSGLLALLTVLIQRDKNA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKD9</accession>
    <name>A0A0M7AKD9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">HTH-type transcriptional repressor KstR2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">kstR2_2</name>
        <name evidence="6" type="ORF">LAX5112_03939</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74690.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673245.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03939"/>
    <dbReference type="EnsemblBacteria" id="CTQ74690">
        <property type="protein sequence ID" value="CTQ74690"/>
        <property type="gene ID" value="LAX5112_03939"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023772">
        <property type="entry name" value="DNA-bd_HTH_TetR-type_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041490">
        <property type="entry name" value="KstR2_TetR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036271">
        <property type="entry name" value="Tet_transcr_reg_TetR-rel_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17932">
        <property type="entry name" value="TetR_C_24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00440">
        <property type="entry name" value="TetR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00455">
        <property type="entry name" value="HTHTETR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48498">
        <property type="entry name" value="SSF48498"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01081">
        <property type="entry name" value="HTH_TETR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50977">
        <property type="entry name" value="HTH_TETR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH tetR-type" evidence="5">
        <location>
            <begin position="14"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="4">
        <location>
            <begin position="37"/>
            <end position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ74690.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="214" mass="24164" checksum="0E81343EADA2D075" modified="2015-12-09" version="1">MALSARPQPRQRGLETAEKVRKAALRLFATSGYAAVSMRDIATQVGVQPGALYNHFPTKQHILKDLMLSHMADLLAAWDTADFPDETDPIERFVRFHIRYHLERADEVFIAYMELRSLDAENFAIVEAERRRYETVLAEILSEGAASGRYHIDNAKVTTRAIIAMLTGIPAWYRPGGDLSKEEIETLYLNMVRKSIARETNDNPGNPDTGDRMA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKY3</accession>
    <name>A0A0M7AKY3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04356</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75778.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673578.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000023.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75778">
        <property type="protein sequence ID" value="CTQ75778"/>
        <property type="gene ID" value="LAX5112_04356"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045919">
        <property type="entry name" value="DUF6338"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19865">
        <property type="entry name" value="DUF6338"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="36"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="77"/>
            <end position="102"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75778.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="216" mass="23955" checksum="110C04122FEC601D" modified="2015-12-09" version="1">MIDSFEAFSVLLLILPGILGFFVYNQVSDFKVKDTLPSVSWVIFFLISTQITSIGLFGQSFFPDLGAETQSGAHQKITAYLGDISATPLIVAAAYGILFGFLKNYSVSHRILKTLKFSKRISSRQPWNEVFHQRRGVWVVVRFKDGTALSGWPHYYADDQGGETQQLYLKKAVWYVPVGESKTLVPSAGTQVQQVPAGAVLLPDMSNVVAIELEED</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALB4</accession>
    <name>A0A0M7ALB4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04405</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75908.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673617.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000023.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75908">
        <property type="protein sequence ID" value="CTQ75908"/>
        <property type="gene ID" value="LAX5112_04405"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019289">
        <property type="entry name" value="Phage_tail_Gp41_put"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10109">
        <property type="entry name" value="Phage_TAC_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ75908.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="102" mass="10884" checksum="DB182DF6D5752F4C" modified="2015-12-09" version="1">MSSNQNQNTAAETTSVDEGAQFSHTLIVPIQKDGGGTISTLTFDEPTIDDMILAEETSTGTNAHVVATLSRSCGITQGDFRKIKARDYNVILRKAGPWLGNG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALH5</accession>
    <name>A0A0M7ALH5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Endolytic murein transglycosylase</fullName>
            <ecNumber evidence="7">4.2.2.-</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Peptidoglycan polymerization terminase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="primary">mltG</name>
        <name evidence="9" type="ORF">LAX5112_03871</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cell inner membrane</location>
            <topology evidence="7">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the transglycosylase MltG family.</text>
    </comment>
    <dbReference type="EC" id="4.2.2.-" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74464.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673178.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03871"/>
    <dbReference type="EnsemblBacteria" id="CTQ74464">
        <property type="protein sequence ID" value="CTQ74464"/>
        <property type="gene ID" value="LAX5112_03871"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008932">
        <property type="term" value="F:lytic endotransglycosylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd08010">
        <property type="entry name" value="MltG_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02065">
        <property type="entry name" value="MltG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003770">
        <property type="entry name" value="MLTG-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30518">
        <property type="entry name" value="PTHR30518"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02618">
        <property type="entry name" value="YceG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00247">
        <property type="entry name" value="TIGR00247"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="1 7" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="5 7 9" id="KW-0456">Lyase</keyword>
    <keyword evidence="4 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="31"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="site" description="Important for catalytic activity" evidence="7">
        <location>
            <position position="237"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ74464.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="367" mass="40511" checksum="5D93EDB708521657" modified="2015-12-09" version="1">MGIKPKSPREALQPEQAPAPPQRSRHVRNPIVILINMVISLAVFGLAAVGGALYFGKHMFEQAGPLTEEATIIIPSGSSLTGITDRLAAKGVIDDTMLDEWVFQLGTRFYKSATELKAGEYAFAPGVSMNDVMTDLVEGKAVTHSVTIPEGWTTAQIIERVREHPILVGEITDVPAEGALLPETYTFARGAARQSVLNQMKAAQDKLLAEIWERRVEDLPVETPEDLVILASIVEKETALADERPRVAGVFVNRLNQNMRLQSDPTILYGLYGGEAWLKDRSAIKQSEIDAENNYNTYQINGLPPGPIGNPGRAAMEAVANPSRTKDLFFVADGTGGHIFAETYDQHRANVRKWREIERQRRQTEQN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AM77</accession>
    <name>A0A0M7AM77_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Glucose 1-dehydrogenase 2</fullName>
            <ecNumber evidence="1">1.1.1.47</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">ycdF_3</name>
        <name evidence="1" type="ORF">LAX5112_04278</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.1.1.47" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000022">
        <property type="protein sequence ID" value="CTQ75542.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673513.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000022.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04278"/>
    <dbReference type="EnsemblBacteria" id="CTQ75542">
        <property type="protein sequence ID" value="CTQ75542"/>
        <property type="gene ID" value="LAX5112_04278"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047936">
        <property type="term" value="F:glucose 1-dehydrogenase [NAD(P)] activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ75542.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="251" mass="26227" checksum="4E26AF07FD34354D" modified="2015-12-09" version="1">MADQKIALVTGAGKRLGKALAEGLAAEGYAIGLHYNSSVDGAEELHDRIRAEGGQSVLLQKDLSQPETAGTLISDAAAALGGPVSVLINSASAFNTDCLSDLTLDSWQFLMNVNAAAPVFLMQAFAQQDPLPDGGLIVNMLDTQMMSASPERFSYFCGKFALDGATRLAAYDLGTKGIRVNAIAPGLILPSDQTQENFDARQKLTPLGPGLGPEDIVGALRYFLSASQVTGHTIVVDAGQRLMGFGNSPIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMR2</accession>
    <name>A0A0M7AMR2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">TGc domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_04339</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000022">
        <property type="protein sequence ID" value="CTQ75716.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673556.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000022.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04339"/>
    <dbReference type="EnsemblBacteria" id="CTQ75716">
        <property type="protein sequence ID" value="CTQ75716"/>
        <property type="gene ID" value="LAX5112_04339"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013589">
        <property type="entry name" value="Bac_transglu_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018667">
        <property type="entry name" value="DUF2126"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002931">
        <property type="entry name" value="Transglutaminase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08379">
        <property type="entry name" value="Bact_transglu_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09899">
        <property type="entry name" value="DUF2126"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01841">
        <property type="entry name" value="Transglut_core"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00460">
        <property type="entry name" value="TGc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="SSF54001"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TGc" evidence="2">
        <location>
            <begin position="172"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="593"/>
            <end position="629"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="602"/>
            <end position="618"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00460"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ75716.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="1138" mass="127350" checksum="56A103771343876D" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMR6</accession>
    <name>A0A0M7AMR6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative proline hydroxylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04273</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75520.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673501.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000021.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04273"/>
    <dbReference type="EnsemblBacteria" id="CTQ75520">
        <property type="protein sequence ID" value="CTQ75520"/>
        <property type="gene ID" value="LAX5112_04273"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044862">
        <property type="entry name" value="Pro_4_hyd_alph_FE2OG_OXY"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13640">
        <property type="entry name" value="2OG-FeII_Oxy_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="2OG-FeII_Oxy_3" evidence="1">
        <location>
            <begin position="118"/>
            <end position="215"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13640"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75520.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="413" mass="47512" checksum="209407F924A1743C" modified="2015-12-09" version="1">MSILHPNLIDNLNDLRTAFDNNEPFRHVEIPNFFQEDVLSRILQQFPVPKAEEMVNEFGVPNRKYACHDVRNIGPVYKEIDDYISGQEFANIMSELTGIRDLLYDPEYHGAGTHDNMSGQGMDPHVDFNFHRTTGYHRRLNAIIYLNDEWKEEWGGCLQVHKDPWDPANDWTKTYLPLKNRCVLFETNEYSWHGFTKVKHPTDPNISRKSFTIYMYTKERPVHEIGDKHGTIYVPRPMPDSIKPGRPLSIDEYEDIKQLIGKRTGMIKGMYEREMKQNNVIKSLMSFRDNFQLPIEGFVRQVGGASGVHGNFGVMKSFEFKLRSIKTLSSFSFSFKIPPYLDGQSVEVLINGIELASFKSNGGKIEGAVAFEMESNDTAEFAFKFARSQSAHAARQGSDKREVSGFIERLRCE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AN37</accession>
    <name>A0A0M7AN37_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Cytochrome bo(3) ubiquinol oxidase subunit 4</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="14">Cytochrome o ubiquinol oxidase subunit 4</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="11">Oxidase bo(3) subunit 4</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="12">Ubiquinol oxidase polypeptide IV</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="13">Ubiquinol oxidase subunit 4</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="16" type="primary">cyoD</name>
        <name evidence="16" type="ORF">LAX5112_04380</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="17" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Cytochrome bo(3) ubiquinol terminal oxidase is the component of the aerobic respiratory chain of E.coli that predominates when cells are grown at high aeration. Has proton pump activity across the membrane in addition to electron transfer, pumping 2 protons/electron.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">Heterooctamer of two A chains, two B chains, two C chains and two D chains.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the cytochrome c oxidase bacterial subunit 4 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75842.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673598.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000023.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04380"/>
    <dbReference type="EnsemblBacteria" id="CTQ75842">
        <property type="protein sequence ID" value="CTQ75842"/>
        <property type="gene ID" value="LAX5112_04380"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009486">
        <property type="term" value="F:cytochrome bo3 ubiquinol oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015990">
        <property type="term" value="P:electron transport coupled proton transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005171">
        <property type="entry name" value="Cyt_c_oxidase_su4_prok"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014210">
        <property type="entry name" value="Cyt_o_ubiqinol_oxidase_su4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03626">
        <property type="entry name" value="COX4_pro"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02847">
        <property type="entry name" value="CyoD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="9 15" id="KW-0472">Membrane</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 15" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8 15" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="15"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="44"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="78"/>
            <end position="100"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008079"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011700"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00014689"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00025694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00030071"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00030211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00031887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00032185"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="CTQ75842.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="107" mass="11739" checksum="72D38C2F96DD6C02" modified="2015-12-09" version="1">MDHTDHTDHTEHRSLGTYLTGFALAIVLTAIPFGLVWTGALTGLAVYGVIAAAAVIQVLVHLVFFLHLNFKSTPGENLFFLAFAAVLICIMVGGSLWIMFDLHHRMM</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AN53</accession>
    <name>A0A0M7AN53_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04632</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000027">
        <property type="protein sequence ID" value="CTQ76555.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76555">
        <property type="protein sequence ID" value="CTQ76555"/>
        <property type="gene ID" value="LAX5112_04632"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ76555.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="73" mass="8175" checksum="A377A60CD8CCA2E3" modified="2015-12-09" version="1">MGKGLVFVMPESWQTPGTKKPATNVTGLGLWSALDTYLWPQTGSDCKLHPRALDRFAVKRGLNRVERVRIFCA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AP03</accession>
    <name>A0A0M7AP03_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Bacteriophytochrome cph2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">cph2_16</name>
        <name evidence="4" type="ORF">LAX5112_04491</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000025">
        <property type="protein sequence ID" value="CTQ76162.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673699.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000025.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76162">
        <property type="protein sequence ID" value="CTQ76162"/>
        <property type="gene ID" value="LAX5112_04491"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01948">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01949">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.450">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001633">
        <property type="entry name" value="EAL_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035919">
        <property type="entry name" value="EAL_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000160">
        <property type="entry name" value="GGDEF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00563">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00990">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00052">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00267">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141868">
        <property type="entry name" value="SSF141868"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00254">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50883">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50887">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="179"/>
            <end position="199"/>
        </location>
    </feature>
    <feature type="domain" description="GGDEF" evidence="3">
        <location>
            <begin position="246"/>
            <end position="383"/>
        </location>
    </feature>
    <feature type="domain" description="EAL" evidence="2">
        <location>
            <begin position="392"/>
            <end position="646"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ76162.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="658" mass="73780" checksum="BDBB3EE9F8EBEBB7" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APX7</accession>
    <name>A0A0M7APX7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Beta-lactamase hydrolase-like protein</fullName>
            <ecNumber evidence="2">3.-.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">blh_3</name>
        <name evidence="2" type="ORF">LAX5112_04754</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.-.-.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000030">
        <property type="protein sequence ID" value="CTQ76949.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673920.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000030.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04754"/>
    <dbReference type="EnsemblBacteria" id="CTQ76949">
        <property type="protein sequence ID" value="CTQ76949"/>
        <property type="gene ID" value="LAX5112_04754"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016788">
        <property type="term" value="F:hydrolase activity, acting on ester bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050313">
        <property type="term" value="F:sulfur dioxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006749">
        <property type="term" value="P:glutathione metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07724">
        <property type="entry name" value="POD-like_MBL-fold"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.15.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001279">
        <property type="entry name" value="Metallo-B-lactamas"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044528">
        <property type="entry name" value="POD-like_MBL-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036866">
        <property type="entry name" value="RibonucZ/Hydroxyglut_hydro"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00753">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00849">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56281">
        <property type="entry name" value="SSF56281"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lactamase_B" evidence="1">
        <location>
            <begin position="25"/>
            <end position="215"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76949.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="297" mass="32623" checksum="9EB13CFAE5B14B30" modified="2015-12-09" version="1">MSSSNYPVDMAIIPEVKAFFDPATNTISYVVKDPASNACAVVDSVMDIDYAAGRITYDHADEIITYIQDNDLDLEWLIETHVHADHLSGAPYIQEKLGGKLGIGEQITVIQETFGKVFNEGTEFQRDGSQFDRLFRDGDTYQIGEMTAFAMYTPGHTPACMVHVMGDAAFAGDTLFMPDGGSARADFPGGDAGTLYDSIQKVLALPDDMRLFMCHDYGPNGRDIAWETTVGDEKAHNIHVGGGKTREEFVRFRTERDAQLDMPKLIIPSLQVNMRAGKLPPADESGKTFLKVPVNGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQ24</accession>
    <name>A0A0M7AQ24_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">4-oxalocrotonate tautomerase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_04331</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000022">
        <property type="protein sequence ID" value="CTQ75694.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673549.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000022.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04331"/>
    <dbReference type="EnsemblBacteria" id="CTQ75694">
        <property type="protein sequence ID" value="CTQ75694"/>
        <property type="gene ID" value="LAX5112_04331"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006725">
        <property type="term" value="P:cellular aromatic compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.429.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004370">
        <property type="entry name" value="4-oxalocrotonate_tautomerase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032710">
        <property type="entry name" value="NTF2-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037401">
        <property type="entry name" value="SnoaL-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014347">
        <property type="entry name" value="Tautomerase/MIF_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12680">
        <property type="entry name" value="SnoaL_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01361">
        <property type="entry name" value="Tautomerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54427">
        <property type="entry name" value="SSF54427"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55331">
        <property type="entry name" value="SSF55331"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tautomerase" evidence="1">
        <location>
            <begin position="2"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="domain" description="SnoaL-like" evidence="2">
        <location>
            <begin position="71"/>
            <end position="174"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01361"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF12680"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ75694.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="188" mass="21145" checksum="BF87851A7F60EB39" modified="2015-12-09" version="1">MPIVELHVLQGYEPQEKLRLHEALTDAVRLVVPAPPEAITVLIHELKGEDYSRGGIHRQGASALPDAGDLVRTYLSAMEARDLERAQSMRSADFVMEFPGTGPLRTLDELIAWAKPRYRFVKKTYDGFDVMQSRKAATVVYCRGNLSGEWPDGDNFEGIRFIDRFEVVAGKITRQDVWNDIAEVKANA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQ70</accession>
    <name>A0A0M7AQ70_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Inner membrane ABC transporter permease protein YdcV</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ydcV_4</name>
        <name evidence="7" type="ORF">LAX5112_04636</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000027">
        <property type="protein sequence ID" value="CTQ76566.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673822.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000027.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04636"/>
    <dbReference type="EnsemblBacteria" id="CTQ76566">
        <property type="protein sequence ID" value="CTQ76566"/>
        <property type="gene ID" value="LAX5112_04636"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="7"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="73"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="103"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="147"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="184"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="237"/>
            <end position="263"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="69"/>
            <end position="256"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ76566.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="279" mass="30643" checksum="F1ABC79BC8866B94" modified="2015-12-09" version="1">MEKRSRSFYVLATFFALFLVFLYGPTLTIGILSFQGPGGGLTFPMRGVSIHWFHDLFEQQAVGDIWGSFFRSITLGLMVMVTTVIVSVMGGLAFRKRFAGSSVLFYVIITSLVIPSILISLGVGLIFSQAGLAVHWSTSGYGSQLTWTLPFGLLIMFAVFNRFDKSYEEAARDQGASAWQTIRYVVLPIIAPMLIGVALFGFTLSYDEFARTLLTAGSYNTLPLEIYGMTTNVTTPVIFALGTLTTLFSFGIIGIFLTVVLLINRRRSRHGSDAGKGMI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQU9</accession>
    <name>A0A0M7AQU9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Putative diaminopropionate ammonia-lyase</fullName>
            <ecNumber evidence="4">4.3.1.15</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">ygeX</name>
        <name evidence="4" type="ORF">LAX5112_04931</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <dbReference type="EC" id="4.3.1.15" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000035">
        <property type="protein sequence ID" value="CTQ77508.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674074.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000035.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04931"/>
    <dbReference type="EnsemblBacteria" id="CTQ77508">
        <property type="protein sequence ID" value="CTQ77508"/>
        <property type="gene ID" value="LAX5112_04931"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008838">
        <property type="term" value="F:diaminopropionate ammonia-lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1100">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001926">
        <property type="entry name" value="PLP-dep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036052">
        <property type="entry name" value="Trypto_synt_PLP_dependent"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00291">
        <property type="entry name" value="PALP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53686">
        <property type="entry name" value="SSF53686"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0456">Lyase</keyword>
    <keyword evidence="2" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PALP" evidence="3">
        <location>
            <begin position="24"/>
            <end position="324"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00291"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ77508.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="335" mass="35396" checksum="5810EDB36A77CFBB" modified="2015-12-09" version="1">MQTLSTRLDHKRAANLMSLWADPAPTPLLERAYTPWTVLIKDETARMGLGAFKALGGIYAVANLCLGADAPRDVSLETIGTAAKGKTFVCASAGNHGMAVARGAKIFGAASRIHLSDTVPESFVARLEAEGATVIRSGATYEESIEAAIKDADSHGFIHLADGSWPGYTEPPRLVMEGYTVLAEEMRAVFEVSGDWPTHVFLQAGVGGMAAAIAQMIRANWAVQPMIIVVEPEAAPCLDEAVKAGRVVDVIGPVSNMGRLDCKTASMLAFEILRETADNYIQITDEEAQTAADVLEKLDVSKTTPSGAAGFAALRQMALPVSARPLIVVSEGAVT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQZ7</accession>
    <name>A0A0M7AQZ7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Glutamine ABC transporter periplasmic protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_04526</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000025">
        <property type="protein sequence ID" value="CTQ76223.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04526"/>
    <dbReference type="EnsemblBacteria" id="CTQ76223">
        <property type="protein sequence ID" value="CTQ76223"/>
        <property type="gene ID" value="LAX5112_04526"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00062">
        <property type="entry name" value="PBPb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809551" evidence="2">
        <location>
            <begin position="25"/>
            <end position="254"/>
        </location>
    </feature>
    <feature type="domain" description="PBPb" evidence="3">
        <location>
            <begin position="26"/>
            <end position="253"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00062"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ76223.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="254" mass="29019" checksum="1E3B67CD676488DF" modified="2015-12-09" version="1">MLRNIGLFCICCLLAGMWHTSVAARPLIIAANPQAPFKYEADGQVRGIDIEVMDEILRELAIDYEVLLIESDQRLQVEAKAGRIDVLLLYSQNEERRTFLEYPSESYIDLDWNFFIRAEDRGKFTFSTFDDLRSMTIGATHGISYIPEFWDAGLQLQLVSENSLQIDKLLAGRIDAVPMNTISTLHHAHIGGYRNQIDFLPKPMKSKAYYNVFSKASTHPDMNKLKAEYDRIIRRMKDDGSIDQIKTTYIGPSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AS56</accession>
    <name>A0A0M7AS56_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04855</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000033">
        <property type="protein sequence ID" value="CTQ77272.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77272">
        <property type="protein sequence ID" value="CTQ77272"/>
        <property type="gene ID" value="LAX5112_04855"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.150.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011049">
        <property type="entry name" value="Serralysin-like_metalloprot_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019960">
        <property type="entry name" value="T1SS_VCA0849"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03661">
        <property type="entry name" value="T1SS_VCA0849"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ77272.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="117" mass="12503" checksum="C385F704E4D23CFF" modified="2015-12-09" version="1">MFVYRSYDLSGGTDTITDFLIGTDKIDLSQMLHSLISYVTEAVNAEDGEGVGGSSEPGTTTIDYSAALARLDVDMAGEDLTLLIDRQGNDAYQEVCTLVGVGNQTVSALHDNDCFIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASP7</accession>
    <name>A0A0M7ASP7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04858</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000033">
        <property type="protein sequence ID" value="CTQ77280.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77280">
        <property type="protein sequence ID" value="CTQ77280"/>
        <property type="gene ID" value="LAX5112_04858"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809586" evidence="1">
        <location>
            <begin position="22"/>
            <end position="422"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77280.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="422" mass="47513" checksum="902028182981BB28" modified="2015-12-09" version="1">MKLKPKLYTAALTLTACLALAPVAFNGVVDAYNHNQIVDLGLDKTEISVKAHYPLYKMIEYPRIKAPTVVLGDSRARALQDKYWQELGRDDVYNFAYGGATVFEIYDTFQYLRENAELETLIVSLPLRSMDARFKGGMNRVPEAISLANDPFGYYTNWFVAKIGWALLQDRYPQVFDAVEKFALSPISEAKAAELSSLETLSVDALLDPALCDECTLQTPNGTLILPAVYHGRGLGLGHWARYWPDIALDRDLPSLFAKQVGTNGAADWRRFKQSEDLWAMVKEIAAWCDENNVELIFFIPPTISEMQQRINDFGLAAANHKFRDRLSKLAPVVDMDFDTGFTRDLKNFTDAYHFGSNPARKIVGELLQVIDSDKEHVKTAMDRRADLACPVRADDITQTHNEGTLQLIEGTSCRIWRQTNG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AT44</accession>
    <name>A0A0M7AT44_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04985</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000038">
        <property type="protein sequence ID" value="CTQ77632.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77632">
        <property type="protein sequence ID" value="CTQ77632"/>
        <property type="gene ID" value="LAX5112_04985"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ77632.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="109" mass="12179" checksum="2C700F0EC26AC2C7" modified="2015-12-09" version="1">MDPRVTPEDDGVGGEAFPYAQPSLWSEFPGPYIRRTTMDRHRPATLSTITPDPIRVLLVSREAKIMCGQNPTHRRHTHPVKFTCAGIHWNLRAEKGRLRSGPAGPQAVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ATB8</accession>
    <name>A0A0M7ATB8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04784</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000030">
        <property type="protein sequence ID" value="CTQ77033.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77033">
        <property type="protein sequence ID" value="CTQ77033"/>
        <property type="gene ID" value="LAX5112_04784"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016788">
        <property type="term" value="F:hydrolase activity, acting on ester bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036514">
        <property type="entry name" value="SGNH_hydro_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="93"/>
            <end position="116"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77033.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="374" mass="40541" checksum="03176E79F75267E2" modified="2015-12-09" version="1">MTWGRLLAILGCGLFLTIALAVSVVFLASGPALTTTGFPSLPQDGETPAVQKIFISGHSLTDRPMPEMLAAIAEDTGQPMFWNMQHIGGSSIKQRSYGAGDQSPWSGYGGGTDKEGAPIDVQDELAASASEDTRPYDVLLITEQHRLLDSLLWQDTPRFLRAYQDVFHAHNPDGQSYFYAPWLDVANLEDPSSWIAYERDAWPVWQCAVAGVNAGLAEDGREDRIMLVPASLALADLVEHLVSTPGGLPGFKDMTAAEILAALFSDSVHLTPLGNSYMAAIVYATLTGNPIPATEFANLSGVQVATLQNIAHEFMETYGREMSTFGDGCAAKVAPSFKIAYPSYTEQLSRNQGTGFLSARLQRLKETLSYLRKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZLS1</accession>
    <name>A0A0M6ZLS1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_00041</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63715.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670102.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ63715">
        <property type="protein sequence ID" value="CTQ63715"/>
        <property type="gene ID" value="LAX5112_00041"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="20"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="77"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="100"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="148"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="157"/>
            <end position="171"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ63715.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="171" mass="19081" checksum="F7BB8970A8CB3D8E" modified="2015-12-09" version="1">MAARMVVPACAAAASWTVIWIGPFYAAVLALWTCWVVLALSRHIPTVSLRLCREAAYGERIWLNQLKQTKAKQGPMLGLYLTAWTALCVTILGGLLQSPLVTVTGVIVAVITQYALWKQLSAYYSQNKTTHPLYRFWDARKANDNNKSFKGLSDGHTTSDLGRERQRPSVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZN89</accession>
    <name>A0A0M6ZN89_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glyoxalase-like domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00013</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63636.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ63636">
        <property type="protein sequence ID" value="CTQ63636"/>
        <property type="gene ID" value="LAX5112_00013"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.180.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029068">
        <property type="entry name" value="Glyas_Bleomycin-R_OHBP_Dase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004360">
        <property type="entry name" value="Glyas_Fos-R_dOase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037523">
        <property type="entry name" value="VOC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00903">
        <property type="entry name" value="Glyoxalase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54593">
        <property type="entry name" value="SSF54593"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51819">
        <property type="entry name" value="VOC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="VOC" evidence="1">
        <location>
            <begin position="1"/>
            <end position="120"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51819"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ63636.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="121" mass="13439" checksum="E439D769AF7BC166" modified="2015-12-09" version="1">MAHFRYLVENVDEAVSFYRDHLGFDLKQQFGPAMAILQRDDLELWLAGPMASASKPMADGTVPKPGGWNRCVLVVADLERLVTELRQNEIPFLNDIVTGPGGKQILCRDPSGNVIELFEPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZNK0</accession>
    <name>A0A0M6ZNK0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Cysteine synthase B</fullName>
            <ecNumber evidence="4">2.5.1.47</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">cysM</name>
        <name evidence="4" type="ORF">LAX5112_00117</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <dbReference type="EC" id="2.5.1.47" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63927.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008192583.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00117"/>
    <dbReference type="EnsemblBacteria" id="CTQ63927">
        <property type="protein sequence ID" value="CTQ63927"/>
        <property type="gene ID" value="LAX5112_00117"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004124">
        <property type="term" value="F:cysteine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006535">
        <property type="term" value="P:cysteine biosynthetic process from serine"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1100">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001216">
        <property type="entry name" value="P-phosphate_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001926">
        <property type="entry name" value="PLP-dep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036052">
        <property type="entry name" value="Trypto_synt_PLP_dependent"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00291">
        <property type="entry name" value="PALP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53686">
        <property type="entry name" value="SSF53686"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00901">
        <property type="entry name" value="CYS_SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PALP" evidence="3">
        <location>
            <begin position="9"/>
            <end position="307"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00291"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ63927.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="344" mass="36644" checksum="549250EE8E880F5D" modified="2015-12-09" version="1">MSVSASVVDAIGNTPLIRLKGLSEETGCEIFGKAEFMNPGQSVKDRPARQMILEAEARGDLKPGGVIVEGTAGNTGIGLALVASARGYRTVIVIPETQTQEKKDMLRMCGAELLEVPAKPFKDPNNYQHVARRLAEEMAKTEPNGVLFADQWNNLDNRKAHFLTTGPEILAQTDGKIDGFICAVGSGGTLAGVSTYLREQKPGITIGCADPLGAGMYHLFKDGEAKATDGGSIAEGIGLGRSTVIVGDIKVDHPYSIPDEEALPLVFDLAENEGLLLGGSSAINLAGARRLAKEMGPGHTIVTILCDHGTRSQSKLYNPEFLRTKNLPVPGWLERTVDLKPPFA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPF0</accession>
    <name>A0A0M6ZPF0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Septum formation initiator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_00224</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64227.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00224"/>
    <dbReference type="EnsemblBacteria" id="CTQ64227">
        <property type="protein sequence ID" value="CTQ64227"/>
        <property type="gene ID" value="LAX5112_00224"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007060">
        <property type="entry name" value="FtsL/DivIC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04977">
        <property type="entry name" value="DivIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="44"/>
            <end position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ64227.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="111" mass="12515" checksum="65B7C91230FBC45D" modified="2015-12-09" version="1">MPRAATRQRKQSFLRRLITPVLAIAALGYFGFHAMNGELGVVGRAMIERQVAELEGELQLLVAERRELAARVSLLRPESLDPDMLDERARLYLNLVHPDELVVLKPQTVAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQ22</accession>
    <name>A0A0M6ZQ22_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">braC_1</name>
        <name evidence="3" type="ORF">LAX5112_00416</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64828.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008192731.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00416"/>
    <dbReference type="EnsemblBacteria" id="CTQ64828">
        <property type="protein sequence ID" value="CTQ64828"/>
        <property type="gene ID" value="LAX5112_00416"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028081">
        <property type="entry name" value="Leu-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13458">
        <property type="entry name" value="Peripla_BP_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809191" evidence="1">
        <location>
            <begin position="20"/>
            <end position="401"/>
        </location>
    </feature>
    <feature type="domain" description="Peripla_BP_6" evidence="2">
        <location>
            <begin position="27"/>
            <end position="375"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13458"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ64828.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="401" mass="40748" checksum="05DB684A95FB4CBF" modified="2015-12-09" version="1">MKTKLLTLAAGLMTATALATVPAKADVKIGLIGGVSGPIAAMAPAMIDAAQLAVQQVNEQGGIGNGEKLVGVVGDSACNPQGGTDAATKAVNIEGVAGIVGPHCSGAVLAAAGSVTIPAGVALVTPSGTSPEITNLEDNDSVFRTVPSDDYQGRALARTLKDKGYGKVAVAYLNNDYGTGLANAFKTEYVDALGGEITQFAAHEEGKASYRSNLAELAKGGADTLVIFDYGDGTGLTILRQALENGFFEKFVGGDGMKSDAVINELGAENLANFVSSSPVGEKSDSLDIFNEAFKGVGGDPDAIFANTSYDAAFLLALALEKTGGKKEGVGAALREVSNGEGEAIRPGEWQKAKELIAAGTAIDYKGAAGDHNFDAKGDVPGTFALFEVGADGFEVVSEMN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZR73</accession>
    <name>A0A0M6ZR73_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">D-malate degradation protein R</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">dmlR_1</name>
        <name evidence="3" type="ORF">LAX5112_00333</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64600.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008189699.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ64600">
        <property type="protein sequence ID" value="CTQ64600"/>
        <property type="gene ID" value="LAX5112_00333"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ64600.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="314" mass="34457" checksum="BCF80A1FDC1D7433" modified="2015-12-09" version="1">MSNLTDMEIFARVVSAGSMSAAGREMNLSPAVVSKRIRRLEEKLGSRLLQRTTRQIAMTEAGQGFYERVIAILASVEEAESFVSRGSAKARGHLKVAVPTSFGRLHIAPHVGKFLANNPDLSINLDLSDDFVDIVGEGYDLAIRIAELSDSSLVARRLAPIHRILCASPEYVEKYGTPQSIDDLLANHVTLAAANQDPWRLAGPNGIETVRTQSPVKTNSSEVVRECLLSGVGIALRSTWDIGPELREGKLQILLPEYRASKDVGLYAVYPSRQFLPAKVRVFIDFLAGLYGSSPYWDAGLEDWLHRPRTAKAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZR99</accession>
    <name>A0A0M6ZR99_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">Bifunctional adenosylcobalamin biosynthesis protein</fullName>
            <ecNumber evidence="12">2.7.1.156</ecNumber>
            <ecNumber evidence="12">2.7.7.62</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="primary">cobP</name>
        <name evidence="15" type="ORF">LAX5112_00126</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4 12">Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 12">
            <text>adenosylcob(III)inamide + ATP = adenosylcob(III)inamide phosphate + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:15769"/>
            <dbReference type="ChEBI" id="CHEBI:2480"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:58502"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.1.156"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>adenosylcob(III)inamide + GTP = adenosylcob(III)inamide phosphate + GDP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:15765"/>
            <dbReference type="ChEBI" id="CHEBI:2480"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
            <dbReference type="ChEBI" id="CHEBI:58189"/>
            <dbReference type="ChEBI" id="CHEBI:58502"/>
            <dbReference type="EC" id="2.7.1.156"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2 12">
            <text>adenosylcob(III)inamide phosphate + GTP + H(+) = adenosylcob(III)inamide-GDP + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:22712"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
            <dbReference type="ChEBI" id="CHEBI:58502"/>
            <dbReference type="ChEBI" id="CHEBI:60487"/>
            <dbReference type="EC" id="2.7.7.62"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="6 12">Cofactor biosynthesis; adenosylcobalamin biosynthesis; adenosylcobalamin from cob(II)yrinate a,c-diamide: step 5/7.</text>
    </comment>
    <comment type="pathway">
        <text evidence="5 12">Cofactor biosynthesis; adenosylcobalamin biosynthesis; adenosylcobalamin from cob(II)yrinate a,c-diamide: step 6/7.</text>
    </comment>
    <comment type="similarity">
        <text evidence="7 12">Belongs to the CobU/CobP family.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.156" evidence="12"/>
    <dbReference type="EC" id="2.7.7.62" evidence="12"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63953.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670152.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00126"/>
    <dbReference type="EnsemblBacteria" id="CTQ63953">
        <property type="protein sequence ID" value="CTQ63953"/>
        <property type="gene ID" value="LAX5112_00126"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00148">
        <property type="reaction ID" value="UER00236"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0036429">
        <property type="term" value="F:adenosylcobinamide kinase (ATP-specific) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0036428">
        <property type="term" value="F:adenosylcobinamide kinase (GTP-specific) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008820">
        <property type="term" value="F:cobinamide phosphate guanylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009236">
        <property type="term" value="P:cobalamin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00544">
        <property type="entry name" value="CobU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003203">
        <property type="entry name" value="Cobinamide_kinase/P_G-Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34848">
        <property type="entry name" value="PTHR34848"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02283">
        <property type="entry name" value="CobU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006135">
        <property type="entry name" value="CobU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11 12" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="12" id="KW-0169">Cobalamin biosynthesis</keyword>
    <keyword evidence="12 14" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="10 12 15" id="KW-0418">Kinase</keyword>
    <keyword evidence="9 12 14" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 12 15" id="KW-0808">Transferase</keyword>
    <feature type="active site" description="GMP-histidine intermediate" evidence="13">
        <location>
            <position position="55"/>
        </location>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <begin position="14"/>
            <end position="21"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <begin position="39"/>
            <end position="41"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <begin position="56"/>
            <end position="59"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="67"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="89"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000312"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00000711"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00001522"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00003889"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00004692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00005159"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00007490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRNR" id="PIRNR006135"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="PIRSR" id="PIRSR006135-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="PIRSR" id="PIRSR006135-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="CTQ63953.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="183" mass="19903" checksum="50313756D32E33C6" modified="2015-12-09" version="1">MTQSDHGRSTLVFGGARSGKSTFAEKLAVRCGLEKVYVATGAALDDEMADRIARHKDQRGSSWITIEEQLDLAGVLSRETAAHRVVLVDCLTLWLSNLMFSDKDMDAETARLLEAVEALAGPCVFVSNEVGMGIVPENRLSRSFRDAQGRLNQDIASVCHQVVFVAAGQPLLLKPSYQPEIGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRC0</accession>
    <name>A0A0M6ZRC0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00133</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63973.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670158.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ63973">
        <property type="protein sequence ID" value="CTQ63973"/>
        <property type="gene ID" value="LAX5112_00133"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="37"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="87"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="130"/>
            <end position="149"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ63973.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="162" mass="17591" checksum="C7B85ABB633A9782" modified="2015-12-09" version="1">MEYIGAVLVRLFAIFLLVSNLSTLLSFAYFAANSDPALQIVSFGAVGGGLLIAGLLFFFPQLVLRDLKTPDPQAEPDRIPSENMLQIGMVVIGLYFTVRGLQSLFNAVLFKSYMASQPISAVLANPELGNGLFTLGMGVFLTIGTRRFINFILGLRRLKAAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRC5</accession>
    <name>A0A0M6ZRC5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">HTH-type transcriptional regulator McbR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">mcbR_1</name>
        <name evidence="6" type="ORF">LAX5112_00384</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64736.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00384"/>
    <dbReference type="EnsemblBacteria" id="CTQ64736">
        <property type="protein sequence ID" value="CTQ64736"/>
        <property type="gene ID" value="LAX5112_00384"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.530">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011711">
        <property type="entry name" value="GntR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008920">
        <property type="entry name" value="TF_FadR/GntR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000524">
        <property type="entry name" value="Tscrpt_reg_HTH_GntR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07729">
        <property type="entry name" value="FCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00392">
        <property type="entry name" value="GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00895">
        <property type="entry name" value="FCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00345">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48008">
        <property type="entry name" value="SSF48008"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50949">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH gntR-type" evidence="5">
        <location>
            <begin position="23"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="4">
        <location>
            <begin position="10"/>
            <end position="24"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ64736.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="236" mass="26012" checksum="6CFF1AA8EA896755" modified="2015-12-09" version="1">MPVRRSALNAGPEKTQTTASARSATRDQVDIAVRSGLLTGRFIPGKAVTLRGLAAELGVSPMPVREVLQRLAAENALEVKPNGRIQVPDMTPERFDEVLMARLLLEPELSLRAMPRLNSDDIAELRRIDDDIDVRLNSGDAEAYMRLNHAFHFHIYRASGSRVLLPLIDSLWLQFAPFMRTVYGRVGTVNLIDQHKAAIHAIEMQDASALKEAITADIADGMGLLGREILQGEEPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZS30</accession>
    <name>A0A0M6ZS30_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00665</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65528.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670613.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00665"/>
    <dbReference type="EnsemblBacteria" id="CTQ65528">
        <property type="protein sequence ID" value="CTQ65528"/>
        <property type="gene ID" value="LAX5112_00665"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.1100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041854">
        <property type="entry name" value="BFD-like_2Fe2S-bd_dom_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ65528.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="101" mass="11429" checksum="EC1CADE3D6F50CAD" modified="2015-12-09" version="1">MLVCSCNVISKSAVESVIQSLLDEDQWQLITPGRVYHAMKKRGQCCSCFPNIISIIVAETEKYHRQAETPEAEIIPFIAKIRSEYDRTQAVRNQLSDARSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSC2</accession>
    <name>A0A0M6ZSC2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">HupE / UreJ protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00292</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64424.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670269.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00292"/>
    <dbReference type="EnsemblBacteria" id="CTQ64424">
        <property type="protein sequence ID" value="CTQ64424"/>
        <property type="gene ID" value="LAX5112_00292"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007038">
        <property type="entry name" value="HupE_UreJ"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04955">
        <property type="entry name" value="HupE_UreJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF016919">
        <property type="entry name" value="HupE_UreJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="35"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="65"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="93"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="117"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="146"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="177"/>
            <end position="197"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64424.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="198" mass="19986" checksum="63FB9906D2723031" modified="2015-12-09" version="1">MRSNAAVFSSVFVLVSLVLAVPALAHTGHGYGGGFISGLAHPILGWDHVAAMVAVGLWGAFLGSLSIWILPIVFPLVMAFGAVLGILGVPIPAVETGIALSAVVLGLMIALAVRAPIWVSAALVGLFAIFHGYAHGTELPASANVFAYAIGFVLATGMLHMIGIAFGLLVKWPAGRIAVRGAGGVISLAGVAFLVGAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSE3</accession>
    <name>A0A0M6ZSE3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Ribose transport system permease protein RbsC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">rbsC_1</name>
        <name evidence="7" type="ORF">LAX5112_00479</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65010.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00479"/>
    <dbReference type="EnsemblBacteria" id="CTQ65010">
        <property type="protein sequence ID" value="CTQ65010"/>
        <property type="gene ID" value="LAX5112_00479"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001851">
        <property type="entry name" value="ABC_transp_permease"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02653">
        <property type="entry name" value="BPD_transp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="31"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="63"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="118"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="142"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="182"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="232"/>
            <end position="250"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="270"/>
            <end position="301"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="313"/>
            <end position="333"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ65010.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="343" mass="35930" checksum="F8CDCA87060ECB69" modified="2015-12-09" version="1">MADVTDKTEVRTSGPRESGMNSFNLAGAGRLLARQGIIVAFAVFMIGFTLANERFLDPDNIMGVIRSSAILGVMALGVTFVVISGNLDLSVGSMMSFATIVVLDLHDKIGPALAIPGMYAMVLCLGAFIGFLVGYLKLNSLIVTLGMLSAIHGLTLTYSGGKNMDIADKEGTWFSVFGQSDVLGIPVPILLFALVASVLGILLAKTPFGRKVYAVGGNGTAATFSGIRRARVVFTCYLLSAFCVATAGLLQASRSLGSQNTVGQGLELEVLAAVILGGASLLGGSGTIFKTVIGVLILGFIQNGLLLVGLQFYAQYVVTWIIIILAVWLDIAAKRGKLWSPIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSM8</accession>
    <name>A0A0M6ZSM8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Transcriptional regulator LsrR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">lsrR</name>
        <name evidence="4" type="ORF">LAX5112_00569</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the SorC transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65272.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00569"/>
    <dbReference type="EnsemblBacteria" id="CTQ65272">
        <property type="protein sequence ID" value="CTQ65272"/>
        <property type="gene ID" value="LAX5112_00569"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030246">
        <property type="term" value="F:carbohydrate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000835">
        <property type="entry name" value="HTH_MarR-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037171">
        <property type="entry name" value="NagB/RpiA_transferase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007324">
        <property type="entry name" value="Sugar-bd_dom_put"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12802">
        <property type="entry name" value="MarR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04198">
        <property type="entry name" value="Sugar-bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100950">
        <property type="entry name" value="SSF100950"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH marR-type" evidence="3">
        <location>
            <begin position="23"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="domain" description="Sugar-bind" evidence="2">
        <location>
            <begin position="62"/>
            <end position="315"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010466"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF04198"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF12802"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ65272.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="327" mass="34700" checksum="7401DF89C5E82331" modified="2015-12-09" version="1">MVVRGDDLTSHMAIRAAWLSFVGGRTQGEIAAQLGVSPAKVHRLIAHAQKAGHVKFQIDGRPMECLQLERELTSHFGLSNCIIAPDVGSGDEDAALRAVAVSAAQFLSGLLGGAGVKRLGVGMGRTLTASVEALPKIQRSELEIMSICGSLTRTLAANPYDIVQKMQERTGGVGYYLPVPYFAENQDEKSMFLTQRSVQDLMSRARQSDAFLIGLGSVENEGHLVQRGMISKQEQENLMSGGAVCDLMGRFLTIDGELAPDPLGDCAVGLHFDEVRGSRVIALVGGESKVDATLAALRTGVITDLVADESLAKALSARVGLQLAQSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSS3</accession>
    <name>A0A0M6ZSS3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Purine nucleoside receptor A</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">tmpC_1</name>
        <name evidence="4" type="ORF">LAX5112_00567</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the BMP lipoprotein family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65266.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00567"/>
    <dbReference type="EnsemblBacteria" id="CTQ65266">
        <property type="protein sequence ID" value="CTQ65266"/>
        <property type="gene ID" value="LAX5112_00567"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003760">
        <property type="entry name" value="PnrA-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02608">
        <property type="entry name" value="Bmp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0675">Receptor</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="domain" description="Bmp" evidence="3">
        <location>
            <begin position="23"/>
            <end position="306"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008610"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF02608"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ65266.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="322" mass="33501" checksum="46FFE6C93742B7CB" modified="2015-12-09" version="1">MSVVLGSLAAFAVQAEPAIVYSVGGKFDGSFNESAFDGVKRFTDETGQAVREFELERDAQSLQALRNFASRGSEPIVAIGFNQANALGQVASEFPEEDFAIVDMVVEQPNVRSYVFKEHEGAYIGGLLAAMASKTGTIGFVGGMDIPIIQRFLCGYKQGALAANQQTKVLSNMTGDTPAAFADPVRGAELARGQINRGADVVIQAAGGTGIGVLQAAADAGVLGLGTDSNQNGLHPGKVLTSIRKRVDNAVYDSFTSAVSGSFAPGVQVLGLKEGGMDWVLDENNHALISEDMKAAADAAVDAISKGEIVVHDVVADGPCPF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZST5</accession>
    <name>A0A0M6ZST5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">D-allose transporter subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_00775</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65839.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670697.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00775"/>
    <dbReference type="EnsemblBacteria" id="CTQ65839">
        <property type="protein sequence ID" value="CTQ65839"/>
        <property type="gene ID" value="LAX5112_00775"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001851">
        <property type="entry name" value="ABC_transp_permease"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02653">
        <property type="entry name" value="BPD_transp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="12"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="62"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="92"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="114"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="146"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="197"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="236"/>
            <end position="259"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="279"/>
            <end position="311"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="323"/>
            <end position="343"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ65839.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="360" mass="37375" checksum="2C2EF3D1B40D18D4" modified="2015-12-09" version="1">MIRFEPRGPVAVSKVISVTVAAAVAALVLAAVPMLFAGLSVFEAYGLMIKGAFGSAFAFTEMLTRATPLILTGLAAAVAFRAKLWNIGAEGQLYAGALAAVAVGTGLFSGPSYVLIPAVIFAGALMGGLVMLGPTLLKTRLGVDEVVTTLLLNFVILLFVQMMLEGPMQDPMGMGWPQSEPILDEAALPKLMDRMRIHWGLIIALISALGVYFLLKRTVWGFEIRAVGENASAARHAGIPVTATFIRVGLLSGALAGLAGVGEVAGLKGYLTADLSPGFGYSGIVVAMLAGLSPIGVVFAALFIASIFVGADSMSRATGVSNYLADLIVAMALLCVLVSGLFLRFKIRFVGAPHAKEASK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZT52</accession>
    <name>A0A0M6ZT52_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase</fullName>
            <ecNumber evidence="1">1.1.1.127</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">kduD_2</name>
        <name evidence="1" type="ORF">LAX5112_00625</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.1.1.127" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65442.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670580.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00625"/>
    <dbReference type="EnsemblBacteria" id="CTQ65442">
        <property type="protein sequence ID" value="CTQ65442"/>
        <property type="gene ID" value="LAX5112_00625"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047001">
        <property type="term" value="F:2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ65442.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="254" mass="27129" checksum="FB1691810D628457" modified="2015-12-09" version="1">MYANFPDLKDSSVFITGGGSGIGASLTDGFLAQGAKVAFVQRSDATAFCDEMEEKHGTRPVFLPCDIIDMSALKASMDEAVKANGSITVLVNNAANDKRHTTEEVDEDFWDWSQAINLKAYFFACQHVVGGMRAAGGGSIVNFTSISYMMGNAGYPAYTTANSGINGLTRSLAREFGPDRIRVNAVAPGWVLTQKQKDMWVTPEGLAAHIDRQCLKEELAPEDMVDPVLFLASKASKAMTGQSLVVDGGVVVTG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZT99</accession>
    <name>A0A0M6ZT99_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Transcriptional regulator KdgR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">kdgR</name>
        <name evidence="5" type="ORF">LAX5112_00630</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65451.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670585.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00630"/>
    <dbReference type="EnsemblBacteria" id="CTQ65451">
        <property type="protein sequence ID" value="CTQ65451"/>
        <property type="gene ID" value="LAX5112_00630"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.450.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029016">
        <property type="entry name" value="GAF-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014757">
        <property type="entry name" value="Tscrpt_reg_IclR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005471">
        <property type="entry name" value="Tscrpt_reg_IclR_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09339">
        <property type="entry name" value="HTH_IclR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01614">
        <property type="entry name" value="IclR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00346">
        <property type="entry name" value="HTH_ICLR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51077">
        <property type="entry name" value="HTH_ICLR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51078">
        <property type="entry name" value="ICLR_ED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH iclR-type" evidence="3">
        <location>
            <begin position="8"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="domain" description="IclR-ED" evidence="4">
        <location>
            <begin position="71"/>
            <end position="254"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51077"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51078"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ65451.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="259" mass="28100" checksum="363B8DD4EDB62F3D" modified="2015-12-09" version="1">MNKHATGDGTVGKALDVLEMVSAKGRPVRFSELLNESPLPKATLYRLLQTLVSQGMLSYGDEQQTYALGIRLVRLAHQAWRQSSIAPIARPIVSALSETVGETVHLAQLDNGQVLYVDKRNAKDPIDMYSQAGKVGPGYCTGVGKALMAFLEPGELDQVIAKQSFYRYTPATLADEASLRADLDRIRQEGIAYDREEHEPEIICIAAPILSPKGRPIGALSVTTSTRRKSLDALKEAKPALLKAASEIAAAVSDWQFPG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZU23</accession>
    <name>A0A0M6ZU23_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">L-Ala-D/L-Glu epimerase</fullName>
            <ecNumber evidence="2">5.1.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00756</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="5.1.1.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65787.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670680.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00756"/>
    <dbReference type="EnsemblBacteria" id="CTQ65787">
        <property type="protein sequence ID" value="CTQ65787"/>
        <property type="gene ID" value="LAX5112_00756"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016836">
        <property type="term" value="F:hydro-lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.390.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034620">
        <property type="entry name" value="Cis-3-h-L-Pro_dehydratase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036849">
        <property type="entry name" value="Enolase-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029017">
        <property type="entry name" value="Enolase-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029065">
        <property type="entry name" value="Enolase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013342">
        <property type="entry name" value="Mandelate_racemase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013341">
        <property type="entry name" value="Mandelate_racemase_N_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13378">
        <property type="entry name" value="MR_MLE_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02746">
        <property type="entry name" value="MR_MLE_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDF00555">
        <property type="entry name" value="cis-3-hydroxy-L-proline_dehydr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00922">
        <property type="entry name" value="MR_MLE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51604">
        <property type="entry name" value="SSF51604"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54826">
        <property type="entry name" value="SSF54826"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0413">Isomerase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MR_MLE" evidence="1">
        <location>
            <begin position="144"/>
            <end position="237"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00922"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65787.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="367" mass="39637" checksum="386ED3D759D22C30" modified="2015-12-09" version="1">MKITAINVYQVDLPLKEGRYSWSNGNFIDVFDSTIVEILTDEGSKGYAECCPLGSAYLPSYALGVRSGIQELAPHLIGLDPLNIGEVNRVMDAALRGHPYAKAPIDIACWDLLGKSTCQPVYTLLGGAAQDDVVLYRAISQEAPEIMAAKIKGYAAEGYTKFQLKVGGDANDDIERIRATRAVLKPSDILVADANTGWTRHEAARVVGAVSSLDVYIEQPCLTYEESVSIRRRTTLPFILDEVIDGPNMLVRGLAEDAMDCINLKISKVGGLTKAKLMRDLCVVHGIPMTIEDTWGGDITTATIAHLARSTPSEFTFSATDFNSYGTVEIAEGAPKRENGRMTASNRPGLGITPIFDALGDPVASYS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZU76</accession>
    <name>A0A0M6ZU76_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Spermidine/putrescine transport system permease protein PotB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">potB_1</name>
        <name evidence="7" type="ORF">LAX5112_00500</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65074.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670451.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00500"/>
    <dbReference type="EnsemblBacteria" id="CTQ65074">
        <property type="protein sequence ID" value="CTQ65074"/>
        <property type="gene ID" value="LAX5112_00500"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="73"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="102"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="124"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="155"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="210"/>
            <end position="231"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="251"/>
            <end position="274"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="69"/>
            <end position="274"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ65074.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="288" mass="31542" checksum="7B78685E913D0C9A" modified="2015-12-09" version="1">MSVEARERRQPWILLSPALTAITLLLFIPLLFIVVYSFWLRTATGADLAGFYLDNWSEALSDPFYRDILLSTLRIAAITTAVCAMMGYPAAYFIARSRGNKALLLLLLMLPFWISYIIRTMSWINILGVSGAVNWTLVNLGLVSEPIQMLYNETTVILGLVHFLLPFMVLNVYVALEGIDISLEDAACSLGSTRWQAFREVTLPLSLPGLAAGGLLCFVLSAGTYITPLVLGGPTDAMFANLVFEAIITQLNWPLGSALSLMLLAVLGALVLIYNHYLGMGQLMKGLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUC6</accession>
    <name>A0A0M6ZUC6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">1,2-phenylacetyl-CoA epoxidase, subunit A</fullName>
            <ecNumber evidence="1">1.14.13.149</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">paaA_1</name>
        <name evidence="1" type="ORF">LAX5112_00795</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.14.13.149" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65897.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670712.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00795"/>
    <dbReference type="EnsemblBacteria" id="CTQ65897">
        <property type="protein sequence ID" value="CTQ65897"/>
        <property type="gene ID" value="LAX5112_00795"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0097266">
        <property type="term" value="F:phenylacetyl-CoA 1,2-epoxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010124">
        <property type="term" value="P:phenylacetate catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1260.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012347">
        <property type="entry name" value="Ferritin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009078">
        <property type="entry name" value="Ferritin-like_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007814">
        <property type="entry name" value="PaaA_PaaC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05138">
        <property type="entry name" value="PaaA_PaaC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47240">
        <property type="entry name" value="SSF47240"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ65897.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="258" mass="28889" checksum="09CFA16DE6E13A0A" modified="2015-12-09" version="1">MTNEAVLDNDTMSLADYLAQGGKLTSPNNVPPRYRAELLRLMSSFVDSELAGSAGFADAINWAPGLKERIAASRITLEKVDHAEQVLDLMSDFGTDKALYNKAHSWSARQSRGAQVDAKRQGGDMRLSVFHYPLQGWTDAVVMNFLMGLATVHQLKDLSQTSYQPLGEMFRKILPREQRHMELGLEGLQVLAADESMREEALSSVAYWLPKVSETFGPAKSERFDRLKQIGLRQTDNETLRAAWQADADKRLTELKLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUU8</accession>
    <name>A0A0M6ZUU8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Biofilm growth-associated repressor</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">bigR_1</name>
        <name evidence="2" type="ORF">LAX5112_00832</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65996.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008191789.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ65996">
        <property type="protein sequence ID" value="CTQ65996"/>
        <property type="gene ID" value="LAX5112_00832"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001845">
        <property type="entry name" value="HTH_ArsR_DNA-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01022">
        <property type="entry name" value="HTH_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00778">
        <property type="entry name" value="HTHARSR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00418">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50987">
        <property type="entry name" value="HTH_ARSR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH arsR-type" evidence="1">
        <location>
            <begin position="18"/>
            <end position="111"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50987"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65996.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="119" mass="13456" checksum="5A8D631C068FAA21" modified="2015-12-09" version="1">MNLPVFKKDMSAEDFDRLMGQARKASDLLKALSHEVRLVILCLLSEGEKSVSELEDILTVPQAAVSQQLARLRLEGLVQTRREGRMIYYSLVDDEVSSIISTLYDLFCKDVRPQPGDNQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZV36</accession>
    <name>A0A0M6ZV36_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Stage II sporulation protein E (SpoIIE)</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01040</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66639.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01040"/>
    <dbReference type="EnsemblBacteria" id="CTQ66639">
        <property type="protein sequence ID" value="CTQ66639"/>
        <property type="gene ID" value="LAX5112_01040"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004722">
        <property type="term" value="F:protein serine/threonine phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036457">
        <property type="entry name" value="PPM-type_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001932">
        <property type="entry name" value="PPM-type_phosphatase_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07228">
        <property type="entry name" value="SpoIIE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00331">
        <property type="entry name" value="PP2C_SIG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="36"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="225"/>
            <end position="245"/>
        </location>
    </feature>
    <feature type="domain" description="PPM-type phosphatase" evidence="2">
        <location>
            <begin position="303"/>
            <end position="535"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00331"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ66639.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="547" mass="60429" checksum="44554B2E50475DE5" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVB3</accession>
    <name>A0A0M6ZVB3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Metallo-beta-lactamase superfamily protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00830</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65990.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670736.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00830"/>
    <dbReference type="EnsemblBacteria" id="CTQ65990">
        <property type="protein sequence ID" value="CTQ65990"/>
        <property type="gene ID" value="LAX5112_00830"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.15.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001279">
        <property type="entry name" value="Metallo-B-lactamas"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036866">
        <property type="entry name" value="RibonucZ/Hydroxyglut_hydro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006311">
        <property type="entry name" value="TAT_signal"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00753">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00849">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56281">
        <property type="entry name" value="SSF56281"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lactamase_B" evidence="1">
        <location>
            <begin position="87"/>
            <end position="291"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65990.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="312" mass="33451" checksum="404EDA1C13640143" modified="2015-12-09" version="1">MPLALKENPSRRCLLKAGLGLGAAAITGLRPSFAASDPIKLGGSEVSVISDGNLSLPMNFLLPEQSPEEIEALFKPHGLPTDTASPDCNITLLRQDDRLVLFDAGAGANFQPSAGELLAGLEEAGIDPSDVTDVIFTHAHPDHLWGILDDFDDVLYSEATLWVPQAEWDYWRADDTLAKTPEARKSFVVGAQARFEAIEDQVQMVTPGMEVIPGVEAVDTSGHTPGHTSYMIHGDGESVLVVGDAITNSVISFEKPDWVSGSDQDPQKGIQTRKALLDRLATDQTQLIGFHLPNMGIGHVERAGSAYKFVAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVD3</accession>
    <name>A0A0M6ZVD3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">TMAO/DMSO reductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">LAX5112_00841</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mo-molybdopterin</name>
            <dbReference type="ChEBI" id="CHEBI:71302"/>
        </cofactor>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66020.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670745.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00841"/>
    <dbReference type="EnsemblBacteria" id="CTQ66020">
        <property type="protein sequence ID" value="CTQ66020"/>
        <property type="gene ID" value="LAX5112_00841"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030151">
        <property type="term" value="F:molybdenum ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014756">
        <property type="entry name" value="Ig_E-set"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005066">
        <property type="entry name" value="MoCF_OxRdtse_dimer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008335">
        <property type="entry name" value="Mopterin_OxRdtase_euk"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000572">
        <property type="entry name" value="OxRdtase_Mopterin-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036374">
        <property type="entry name" value="OxRdtase_Mopterin-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030835">
        <property type="entry name" value="Sulfite_DH_SoxC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006311">
        <property type="entry name" value="TAT_signal"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03404">
        <property type="entry name" value="Mo-co_dimer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00174">
        <property type="entry name" value="Oxidored_molyb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00407">
        <property type="entry name" value="EUMOPTERIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56524">
        <property type="entry name" value="SSF56524"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81296">
        <property type="entry name" value="SSF81296"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR04555">
        <property type="entry name" value="sulfite_DH_soxC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0500">Molybdenum</keyword>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Oxidored_molyb" evidence="4">
        <location>
            <begin position="113"/>
            <end position="273"/>
        </location>
    </feature>
    <feature type="domain" description="Mo-co_dimer" evidence="5">
        <location>
            <begin position="295"/>
            <end position="411"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001924"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022505"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00174"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF03404"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ66020.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="427" mass="47370" checksum="B0E7BF7F1F50AA0A" modified="2015-12-09" version="1">MSETKDKGTPSLSRRSLLKAGLASGVAAGAAGAAGAARAAGDPLITEIQDWNRYLGDGVDAAPYGLPSEFESEVVRRNVPWLTADAVASINFTPLHELDGIITPNGLCFERHHGGVAQIRPQDHRLMINGLVDTPLVFTMEDLKRFPRENHVYFLECAANGGMEWRGSQLNGCQFTHGMVHNVMYTGVKLKTLLEEAGVKTNGKWVLPEGADAAHMTRSIPMEKALDDCLVAWKMNGEALRAEQGYPLRLVVPGWEGNMWVKWLRRLEVGDQPWHHREETSKYTDLLETGKARRFTWVMDPKSVITSPSPQMPVSHGKGPMVISGLAWSGNGRITRVDVSLDGGRNWKTARIDGPSLSKSLHRFYLDIDWDGSEMLIQSRAMDEHGFYQPTKNELRAARGENSIYHNNGIQTWYVQKNGAVENVEVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVS6</accession>
    <name>A0A0M6ZVS6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01121</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66865.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ66865">
        <property type="protein sequence ID" value="CTQ66865"/>
        <property type="gene ID" value="LAX5112_01121"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="57"/>
            <end position="75"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66865.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="81" mass="9176" checksum="C7A1D36B7DF6EA89" modified="2015-12-09" version="1">MFASNALHIASSVPNRQLVEYFDIFQHLTLDIFRFKKVLNCAENCTVPGLVCNSLRILLVICITFSALFYGLLPIRTRTAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVW4</accession>
    <name>A0A0M6ZVW4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Type VI secretion-associated protein, family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_01145</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66929.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670998.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01145"/>
    <dbReference type="EnsemblBacteria" id="CTQ66929">
        <property type="protein sequence ID" value="CTQ66929"/>
        <property type="gene ID" value="LAX5112_01145"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010657">
        <property type="entry name" value="ImpA_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017739">
        <property type="entry name" value="T6SS-assoc_VCA0119"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06812">
        <property type="entry name" value="ImpA_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16989">
        <property type="entry name" value="T6SS_VasJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ImpA_N" evidence="3">
        <location>
            <begin position="29"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="241"/>
            <end position="266"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="186"/>
            <end position="216"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF06812"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ66929.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="578" mass="61126" checksum="31FF566CB3134D49" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZW99</accession>
    <name>A0A0M6ZW99_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Polysaccharide export protein Wza</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_01011</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66557.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451812.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01011"/>
    <dbReference type="EnsemblBacteria" id="CTQ66557">
        <property type="protein sequence ID" value="CTQ66557"/>
        <property type="gene ID" value="LAX5112_01011"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015159">
        <property type="term" value="F:polysaccharide transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003715">
        <property type="entry name" value="Poly_export"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019554">
        <property type="entry name" value="Soluble_ligand-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02563">
        <property type="entry name" value="Poly_export"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10531">
        <property type="entry name" value="SLBB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809333" evidence="2">
        <location>
            <begin position="23"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="domain" description="SLBB" evidence="3">
        <location>
            <begin position="112"/>
            <end position="161"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF10531"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ66557.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="185" mass="20409" checksum="2445F6498BCE42ED" modified="2015-12-09" version="1">MRMRALLVPALCLGLAACSGYRQPPTAFHETLTQPYRLDSSDRLRIIVFGQDDLSNTYVIDQAGYISFPLVGSVAARGKTQQGLAAEISAKLRQGYIRDPDVSVEVDTYRPIFVMGEVQNAGQYNYVAGMTVQNAIATAGGFSSRARQEDVDITRQINGEILNGRVPISDPVRPGDTIYVRERYF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWS3</accession>
    <name>A0A0M6ZWS3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01041</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66642.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008192128.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01041"/>
    <dbReference type="EnsemblBacteria" id="CTQ66642">
        <property type="protein sequence ID" value="CTQ66642"/>
        <property type="gene ID" value="LAX5112_01041"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046239">
        <property type="entry name" value="DUF6272"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19788">
        <property type="entry name" value="DUF6272"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ66642.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="183" mass="21166" checksum="EEEABF7CA815D8DC" modified="2015-12-09" version="1">MLANDMYSFKQELSDRKMLFAYSGYLSENLLESLGNSVKQQMELKNAESKVAKRVFSVFVEQVQNIIRYSDEQEFLSETKADRLSGGVVAFGHEHERFFVICGNPVPGSEAEQLRTRLEEIASMDEVTLRKHYRTKLREEPEEQSEGGSIGLLEIARRATQPLEFDFHEIEDDRKFFVLKAFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZX38</accession>
    <name>A0A0M6ZX38_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Nitrile hydratase subunit beta</fullName>
            <shortName evidence="5">NHase</shortName>
            <ecNumber evidence="5">4.2.1.84</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">nthB</name>
        <name evidence="7" type="ORF">LAX5112_01325</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2 5">NHase catalyzes the hydration of various nitrile compounds to the corresponding amides.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 5">
            <text>an aliphatic amide = a nitrile + H2O</text>
            <dbReference type="Rhea" id="RHEA:12673"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:18379"/>
            <dbReference type="ChEBI" id="CHEBI:65285"/>
            <dbReference type="EC" id="4.2.1.84"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="3 5">Belongs to the nitrile hydratase subunit beta family.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.84" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67315.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671144.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01325"/>
    <dbReference type="EnsemblBacteria" id="CTQ67315">
        <property type="protein sequence ID" value="CTQ67315"/>
        <property type="gene ID" value="LAX5112_01325"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0080109">
        <property type="term" value="F:indole-3-acetonitrile nitrile hydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046914">
        <property type="term" value="F:transition metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006807">
        <property type="term" value="P:nitrogen compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.472.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042262">
        <property type="entry name" value="CN_hydtase_beta_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024690">
        <property type="entry name" value="CN_hydtase_beta_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008990">
        <property type="entry name" value="Elect_transpt_acc-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003168">
        <property type="entry name" value="Nitrile_hydratase_bsu"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02211">
        <property type="entry name" value="NHase_beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001427">
        <property type="entry name" value="NHase_beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50090">
        <property type="entry name" value="SSF50090"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03888">
        <property type="entry name" value="nitrile_beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5 7" id="KW-0456">Lyase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NHase_beta" evidence="6">
        <location>
            <begin position="1"/>
            <end position="217"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001410"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRNR" id="PIRNR001427"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF02211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ67315.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="219" mass="24349" checksum="EC8FCE4DB0907B87" modified="2015-12-09" version="1">MNGAQDLGGQMGFGPIELEDNEPNFHAKWEERAFAITLAMGGTGSWNIDTSRHARETLPPPIYLTSSYYEIWTRGLEKLCLDKELITEAELKTGHMEVPAKPVKQVLTADKVAAALAKGGPADRPEQQLARFKVGNKIRTKRMHPEGHTRLPRYARDATGVIEAMHGVHVFPDANAHGHGEQPTWLYGVLFKGTDIWGPDSDPSLSLRIDLWEPYLDLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXG7</accession>
    <name>A0A0M6ZXG7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Serine/threonine phosphatase stp</fullName>
            <ecNumber evidence="3">3.1.3.16</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">stp_1</name>
        <name evidence="3" type="ORF">LAX5112_01133</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.3.16" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66896.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670989.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01133"/>
    <dbReference type="EnsemblBacteria" id="CTQ66896">
        <property type="protein sequence ID" value="CTQ66896"/>
        <property type="gene ID" value="LAX5112_01133"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017018">
        <property type="term" value="F:myosin phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006470">
        <property type="term" value="P:protein dephosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00143">
        <property type="entry name" value="PP2Cc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015655">
        <property type="entry name" value="PP2C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036457">
        <property type="entry name" value="PPM-type_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001932">
        <property type="entry name" value="PPM-type_phosphatase_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13832">
        <property type="entry name" value="PTHR13832"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00331">
        <property type="entry name" value="PP2C_SIG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00332">
        <property type="entry name" value="PP2Cc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81606">
        <property type="entry name" value="SSF81606"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51746">
        <property type="entry name" value="PPM_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PPM-type phosphatase" evidence="2">
        <location>
            <begin position="13"/>
            <end position="227"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="35"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51746"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ66896.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="231" mass="25080" checksum="B06CC3335302F27A" modified="2015-12-09" version="1">MVTKKKKTGTGLEIETATRQGTRHSQNEDNHVSKPEHAMFAVSDGMGGHRDGHLASRAFVEELQVIEFADGEGVNERLQRIEAAFHRVNDRLYGSYLENPDADISGCTGLTLIIHDGYAGCQWVGDSRLYLLRQGHLFLVSEDHSDDLGRLTRALGSHEDILVDRRVIEFSKGDCFVLCTDGLFKGASETTIADALADGSAGVADRLVAHAVEGGSSDDVTLITVRLNDNG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXV1</accession>
    <name>A0A0M6ZXV1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Carnitine catabolism transcriptional activator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">cdhR_2</name>
        <name evidence="2" type="ORF">LAX5112_01162</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66972.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671010.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01162"/>
    <dbReference type="EnsemblBacteria" id="CTQ66972">
        <property type="protein sequence ID" value="CTQ66972"/>
        <property type="gene ID" value="LAX5112_01162"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="SSF52317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="1">
        <location>
            <begin position="228"/>
            <end position="326"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66972.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="328" mass="36605" checksum="20CF6D1F3C35462A" modified="2015-12-09" version="1">MNKRAEVTTKDAKFEEGEQVVFEIFVQPGFSDLELSAVTTVLRTANDILNNDVYSWKIISDEPGLVTSSSDLIVRAAPAISGQYLCDCLVVIGGRTNPPEAWLARLRAMQQLQRRVILLSDASRQYVRSVNNLDAPTTAHWRDVSLLQEVGSYPKLTDSLVETHGTVLTCAGHGHTLEAMIGVLEGQLDRRQCAEIASLLVLDRVRGFSSEQPKGSSYSSSYFEKRLQNALRLMEANIEQPLRLADVAKEVGLSTRHLERLFTVYFNTTPSKLYKKIRLKKAHALVVDTHLQQIEIALSCGFGSAGSFSLAYKAEYGETPTQRRKRMR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXY8</accession>
    <name>A0A0M6ZXY8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Putative L,D-transpeptidase YbiS</fullName>
            <ecNumber evidence="5">2.-.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ybiS_1</name>
        <name evidence="5" type="ORF">LAX5112_01468</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Cell wall biogenesis; peptidoglycan biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the YkuD family.</text>
    </comment>
    <dbReference type="EC" id="2.-.-.-" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67655.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671286.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01468"/>
    <dbReference type="EnsemblBacteria" id="CTQ67655">
        <property type="protein sequence ID" value="CTQ67655"/>
        <property type="gene ID" value="LAX5112_01468"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00219"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071972">
        <property type="term" value="F:peptidoglycan L,D-transpeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd16913">
        <property type="entry name" value="YkuD_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.440.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005490">
        <property type="entry name" value="LD_TPept_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038063">
        <property type="entry name" value="Transpep_catalytic_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03734">
        <property type="entry name" value="YkuD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141523">
        <property type="entry name" value="SSF141523"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="YkuD" evidence="4">
        <location>
            <begin position="83"/>
            <end position="216"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004752"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF03734"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ67655.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="219" mass="24203" checksum="00978F71455EE5BF" modified="2015-12-09" version="1">MLDRRTFLISAAAAIATGCSGNTTAKLPPKPSLTKPVSTDYVQMYAARPQERFPVPAVDISKIDPKFYRQVVDYNSSAQPGSIVVETHERFLYLAMGDGKAMRYGVGIGRDGFAWGGRARIARKKAWPTWTPPADMIKRQPKLAKYKNGMDPGLDNPLGARALYIFEGNKDTLYRIHGTSETWSIGKAASSGCVRMLQQDVIDLYNRVPEGTPITVYQV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZY23</accession>
    <name>A0A0M6ZY23_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01211</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67096.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671050.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67096">
        <property type="protein sequence ID" value="CTQ67096"/>
        <property type="gene ID" value="LAX5112_01211"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67096.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="201" mass="21981" checksum="427E39819DB2E16D" modified="2015-12-09" version="1">MTCFDREKVIDDGLSRLRTQYRESPNLIAVIRHGLEQIADVADAICTIPEEHEILSGVGDQLTNVGKRLGWPRCHCVCGNTNLCQSDDEVYRGYLLARRYQVLRLFDVVSLEIAAAHIWGATANVRNLGGARVAVGPGRALTASETEQIQLAFRVLPIAPGIQPFLETATGPVWGFGAGWAGLCDGRWSCPVEIDPYGCDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZY50</accession>
    <name>A0A0M6ZY50_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01284</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67237.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01284"/>
    <dbReference type="EnsemblBacteria" id="CTQ67237">
        <property type="protein sequence ID" value="CTQ67237"/>
        <property type="gene ID" value="LAX5112_01284"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009273">
        <property type="entry name" value="DUF930"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06059">
        <property type="entry name" value="DUF930"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67237.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="183" mass="20019" checksum="DD1097D0F1E43AAC" modified="2015-12-09" version="1">MRLTAPSQATGSSVFHERTISAAQPNATPNDAAIAAPGFSLDTETAEESDWRAAENWVPAAELRSALVLQDRRSAQARAALQTVTGRDRREQLCALEAMEQFGAHAEGFRPDRLVPYALKNTIQRGLELYAPAGVLRSQGNWYEVAYRCLLNEAGDRVMDFQFVLGPPIPGNLWDDLGLAAVH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYN4</accession>
    <name>A0A0M6ZYN4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01331</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67326.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008188914.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67326">
        <property type="protein sequence ID" value="CTQ67326"/>
        <property type="gene ID" value="LAX5112_01331"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="28"/>
            <end position="55"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67326.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="78" mass="8830" checksum="21B2FE2E1DE568A5" modified="2015-12-09" version="1">MSYAEQIKSLFPEDWPIVLENCAADPEIEEICSDLARLAQDLETAEDNIAFMSSNLKQDVLKTMKALAQEIRQKLDLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYQ9</accession>
    <name>A0A0M6ZYQ9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01557</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67885.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671350.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67885">
        <property type="protein sequence ID" value="CTQ67885"/>
        <property type="gene ID" value="LAX5112_01557"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67885.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="106" mass="11570" checksum="DA856D404E1D258A" modified="2015-12-09" version="1">MYAPSVTDNTGIRLAPASRTRLRHGKLIKVDKTDICDCTLYDLQNGGTGVVIPDAEADLPDTLYVADTKLATVNLAKVRWRVGSNLGVLYLEKPIQLSLKQSAKTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYX0</accession>
    <name>A0A0M6ZYX0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Leucine-responsive regulatory protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">lrp_4</name>
        <name evidence="5" type="ORF">LAX5112_01580</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67945.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671366.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01580"/>
    <dbReference type="EnsemblBacteria" id="CTQ67945">
        <property type="protein sequence ID" value="CTQ67945"/>
        <property type="gene ID" value="LAX5112_01580"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000485">
        <property type="entry name" value="AsnC-type_HTH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019888">
        <property type="entry name" value="Tscrpt_reg_AsnC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019887">
        <property type="entry name" value="Tscrpt_reg_AsnC/Lrp_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019885">
        <property type="entry name" value="Tscrpt_reg_HTH_AsnC-type_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01037">
        <property type="entry name" value="AsnC_trans_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00033">
        <property type="entry name" value="HTHASNC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00344">
        <property type="entry name" value="HTH_ASNC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00519">
        <property type="entry name" value="HTH_ASNC_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50956">
        <property type="entry name" value="HTH_ASNC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH asnC-type" evidence="4">
        <location>
            <begin position="1"/>
            <end position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50956"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ67945.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="152" mass="17049" checksum="49355BA1A9EAF16D" modified="2015-12-09" version="1">MDAKDRQIIRALQQNGRMTNQELAAKVNLSPSPCLRRVKILEAGGAIKAYTAEVDPKAYGLPVTVFVRIRLERHNAEDVQHFESRVQAMDEVLECVVMTGATDYQLRVVVSGLDAYEDFIRHRIHPIGCIASIDSSFVYGFVKKTGVFPRVD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZI3</accession>
    <name>A0A0M6ZZI3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Secreted effector protein PipB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01400</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67460.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01400"/>
    <dbReference type="EnsemblBacteria" id="CTQ67460">
        <property type="protein sequence ID" value="CTQ67460"/>
        <property type="gene ID" value="LAX5112_01400"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001646">
        <property type="entry name" value="5peptide_repeat"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00805">
        <property type="entry name" value="Pentapeptide"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="105"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="16"/>
            <end position="36"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ67460.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="351" mass="39286" checksum="4AFD08032336D7C7" modified="2015-12-09" version="1">MRRPPRIKRNSSPRPSKLSERSTGRTTTRSNQPKPSPFNVSSPPMKVHRSSRPSEPVLTREDIPPQITRDDIHGAFVSAINQTEANKYAQLSLLQRRAKRLRESWFVVGLEALGLIGLIFAVGLFVYDLQERQDERIARAWQLVTTQAPGNSGKVEALEYLNSEYGCPITWGVEKWCWKKRIPLNGVDVSSVLNKGPVILYGLDLSGAELENAKFDGAVLINADFTDADLEGASFVGTDLMVSTFENANIGGADFTCAHLSGVDFLNTSYITSSNRPKGFKATLSWALSNTPAINLPERAFERYILDQITLVDTLNSERRKKFAKRTLERCKIDLSKHPFLQPRHPSLEED</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZW2</accession>
    <name>A0A0M6ZZW2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Hydroxyacylglutathione hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01423</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67540.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67540">
        <property type="protein sequence ID" value="CTQ67540"/>
        <property type="gene ID" value="LAX5112_01423"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.15.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001279">
        <property type="entry name" value="Metallo-B-lactamas"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036866">
        <property type="entry name" value="RibonucZ/Hydroxyglut_hydro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006311">
        <property type="entry name" value="TAT_signal"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00753">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00849">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56281">
        <property type="entry name" value="SSF56281"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809158" evidence="1">
        <location>
            <begin position="28"/>
            <end position="315"/>
        </location>
    </feature>
    <feature type="domain" description="Lactamase_B" evidence="2">
        <location>
            <begin position="43"/>
            <end position="229"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ67540.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="315" mass="34262" checksum="9FF3D652F658983E" modified="2015-12-09" version="1">MTLTRRQFSTSLIALAATLPMANSAWASVSYKTGHYTYEGHGSVNTHWIETPNSVIVIDVQRDTTHAAEAIEAIRALGKPVSAILITHGHPDHYVGVHQFQQVWPGLKVYASPETTRVIETDHYGYHEVVRQLTPDEAPEVFVVPDQVFADGATLQIDGVTIETHEMGPAEATSTTAFYLPETGDLYPGDLILNDMHGFFYEERSGLVLDALNRLRVLFPDAVTAHPGHGSPGPFRPLVDKQEDYTETARTLVASALATGLVEGDLVSRVTTQLNATYPSYGIPGGQPNMVELSVMGLANELSALRDGSPTNLEQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0K8</accession>
    <name>A0A0M7A0K8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Pyrophosphate--fructose 6-phosphate 1-phosphotransferase</fullName>
            <ecNumber evidence="10">2.7.1.90</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10">6-phosphofructokinase, pyrophosphate dependent</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="10">PPi-dependent phosphofructokinase</fullName>
            <shortName evidence="10">PPi-PFK</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="10">Pyrophosphate-dependent 6-phosphofructose-1-kinase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="12" type="primary">pfkA1</name>
        <name evidence="10" type="synonym">pfp</name>
        <name evidence="12" type="ORF">LAX5112_01579</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3 10">Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 10">
            <text>beta-D-fructose 6-phosphate + diphosphate = beta-D-fructose 1,6-bisphosphate + H(+) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:13613"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:32966"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57634"/>
            <dbReference type="EC" id="2.7.1.90"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 10">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="activity regulation">
        <text evidence="10">Non-allosteric.</text>
    </comment>
    <comment type="pathway">
        <text evidence="4 10">Carbohydrate degradation; glycolysis; D-glyceraldehyde 3-phosphate and glycerone phosphate from D-glucose: step 3/4.</text>
    </comment>
    <comment type="subunit">
        <text evidence="10">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="10">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="10">Belongs to the phosphofructokinase type A (PFKA) family. PPi-dependent PFK group II subfamily. Clade 'B2' sub-subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.90" evidence="10"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67942.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671365.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01579"/>
    <dbReference type="EnsemblBacteria" id="CTQ67942">
        <property type="protein sequence ID" value="CTQ67942"/>
        <property type="gene ID" value="LAX5112_01579"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00109">
        <property type="reaction ID" value="UER00182"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003872">
        <property type="term" value="F:6-phosphofructokinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047334">
        <property type="term" value="F:diphosphate-fructose-6-phosphate 1-phosphotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006002">
        <property type="term" value="P:fructose 6-phosphate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.460">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01978">
        <property type="entry name" value="Phosphofructokinase_II_B2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022953">
        <property type="entry name" value="ATP_PFK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000023">
        <property type="entry name" value="Phosphofructokinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035966">
        <property type="entry name" value="PKF_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011404">
        <property type="entry name" value="PPi-PFK_XF0274"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00365">
        <property type="entry name" value="PFK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF036483">
        <property type="entry name" value="PFK_XF0274"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00476">
        <property type="entry name" value="PHFRCTKINASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53784">
        <property type="entry name" value="SSF53784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="9 10" id="KW-0324">Glycolysis</keyword>
    <keyword evidence="7 10 12" id="KW-0418">Kinase</keyword>
    <keyword evidence="8 10" id="KW-0460">Magnesium</keyword>
    <keyword evidence="6 10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 10 12" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PFK" evidence="11">
        <location>
            <begin position="5"/>
            <end position="321"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="10">
        <location>
            <begin position="136"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="10">
        <location>
            <begin position="180"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="10">
        <location>
            <begin position="295"/>
            <end position="298"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="10">
        <location>
            <position position="138"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="13"/>
        </location>
        <ligand>
            <name>diphosphate</name>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="108"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <note>catalytic</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="237"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="site" description="Important for catalytic activity and substrate specificity; stabilizes the transition state when the phosphoryl donor is PPi; prevents ATP from binding by mimicking the alpha-phosphate group of ATP" evidence="10">
        <location>
            <position position="109"/>
        </location>
    </feature>
    <feature type="site" description="Important for catalytic activity; stabilizes the transition state when the phosphoryl donor is PPi" evidence="10">
        <location>
            <position position="135"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000628"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00003138"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00004679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023152"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01978"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF00365"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ67942.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="406" mass="44414" checksum="FEFDA4A48F114423" modified="2015-12-09" version="1">MFHGKVLVAQGGGPTAVINQSMVGAVLESRKFRSVELIYGAVHGVRGILDEDFYDLTQETTHNLEMVANTPSSALGSTRDKPDLKYCQEIFKVLRAHEIGYFFYTGGNDSSDTVRIVNDEARKAGYDLRCIHIPKTIDNDLVENDHTPGFPSAARYVSQAFMGINLDNAALPGIYIGVVMGRHAGFLTAASALGKKFSDDGPHLIYMPERTFDIDQFIQDVRDVYNRLGRCVVAVSEGIHDASGEPIISKLSQEIERDAHGNVQLSGSGALADLLTQKVKEALNVTRVRGDTLGYIQRSFVGCVSDVDQHEAREVGEKAVQYGMFGDRDGSVTIKRTGHYSVDYELVPLELVAGKTRTMPDAFISASGNDVTDEFRMYLRPLLGSGMPDAHRLRPNKVPKILAAGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0P0</accession>
    <name>A0A0M7A0P0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">YCII-related domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01806</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the YciI family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68608.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671528.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ68608">
        <property type="protein sequence ID" value="CTQ68608"/>
        <property type="gene ID" value="LAX5112_01806"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005545">
        <property type="entry name" value="YCII"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03795">
        <property type="entry name" value="YCII"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="YCII" evidence="2">
        <location>
            <begin position="1"/>
            <end position="114"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007689"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF03795"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ68608.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="119" mass="12920" checksum="F738FA464334D585" modified="2015-12-09" version="1">MKYMMLIYADPAREPVYGTPEFEKMMAGYFALSEKLAADGVMLAGEGLKEAETAKALRVRGGKVETMDGPFAETKEHLGGFYLIDVPDLDTALGYAAQIPSAEYGTVEVRPVMDYPDAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A166</accession>
    <name>A0A0M7A166_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01887</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68788.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671585.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ68788">
        <property type="protein sequence ID" value="CTQ68788"/>
        <property type="gene ID" value="LAX5112_01887"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009305">
        <property type="entry name" value="Mpo1-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR28026">
        <property type="entry name" value="PTHR28026"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06127">
        <property type="entry name" value="DUF962"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="29"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="106"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="135"/>
            <end position="153"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68788.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="160" mass="17870" checksum="167159A361554200" modified="2015-12-09" version="1">MATQTANNRRIDSLLAEYGESHQNATNKFIHWICVPVIVWTVTALLWSLPVPSWFIAVTFLNWSTLVIGLATLYYLTLSVPLAFGMAVIGAICSAINASYGLPLPLWQTALAVFVVAWIGQFIGHKIEGKKPSFFKDIQFLLVGPAWLLHFVYRKAGIKY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A171</accession>
    <name>A0A0M7A171_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">HTH-type transcriptional regulator YofA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yofA_3</name>
        <name evidence="3" type="ORF">LAX5112_01414</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67523.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671246.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67523">
        <property type="protein sequence ID" value="CTQ67523"/>
        <property type="gene ID" value="LAX5112_01414"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="4"/>
            <end position="61"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ67523.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="283" mass="30414" checksum="A0444F1FE1688C1A" modified="2015-12-09" version="1">MSSLDSDLLRTFLMVAATGSITEGARVIGRSQSATSLQIMRLEDVVGRPVFDRTGRGVSLSETGERLLPVAREVIGRLDGALREITSDGLRGRLRLAIPDDHGQVKLAAILGAFAQSHPQVELEVTCSISTEFPEMIAKGQLDLAVYEVETPQAFEEVIHEDPTCWVSAKHQSLLENEVMPVALFDRACWWRDAAIAALERSGRPYRIVFSSQSVAGVTAAVEAGIAIGLLGRSSISSQMQELGKKDGFGGTPVSRLVIGTSEGGDKDLVATMSEAIRMAFKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1N7</accession>
    <name>A0A0M7A1N7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01719</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68382.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671477.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01719"/>
    <dbReference type="EnsemblBacteria" id="CTQ68382">
        <property type="protein sequence ID" value="CTQ68382"/>
        <property type="gene ID" value="LAX5112_01719"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ68382.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="97" mass="10523" checksum="AB21593085085061" modified="2015-12-09" version="1">MNDNDLEMDPVVYIVIGRVWKDEDTSPDAAITIHAFLMAPDDDDAVRKTLEALSSQGFTEADLDQIGVIDGEPDEPIYEGAYHDALSGNVAIVTLAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2R7</accession>
    <name>A0A0M7A2R7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">TRAP-type mannitol/chloroaromatic compound transport system, small permease component</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">LAX5112_01917</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68871.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01917"/>
    <dbReference type="EnsemblBacteria" id="CTQ68871">
        <property type="protein sequence ID" value="CTQ68871"/>
        <property type="gene ID" value="LAX5112_01917"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007387">
        <property type="entry name" value="TRAP_DctQ"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35011">
        <property type="entry name" value="PTHR35011"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04290">
        <property type="entry name" value="DctQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="7"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="43"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="89"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="127"/>
            <end position="145"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ68871.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="157" mass="17358" checksum="5FBB38E589E09728" modified="2015-12-09" version="1">MQKLLQAVCWLCMGLAIIVFAGQLAMVLMRYLLGVGFVELQDAVSYSFAALVALSVAVTFDRDRHVRVDVFRQTWSESVNQRIDRAGDLLFALPVFGLMLWAAYPLVKSSWLILEGSQETGGLPGLFVVKTCLVILPALILLIVLKRFVGAVRRSVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3B8</accession>
    <name>A0A0M7A3B8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">TPR repeat-containing protein YfgC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">yfgC_1</name>
        <name evidence="9" type="ORF">LAX5112_02165</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69565.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671917.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02165"/>
    <dbReference type="EnsemblBacteria" id="CTQ69565">
        <property type="protein sequence ID" value="CTQ69565"/>
        <property type="gene ID" value="LAX5112_02165"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004222">
        <property type="term" value="F:metalloendopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001915">
        <property type="entry name" value="Peptidase_M48"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01435">
        <property type="entry name" value="Peptidase_M48"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0482">Metalloprotease</keyword>
    <keyword evidence="2" id="KW-0645">Protease</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0732">Signal</keyword>
    <keyword evidence="5" id="KW-0862">Zinc</keyword>
    <feature type="signal peptide" evidence="7">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809424" evidence="7">
        <location>
            <begin position="21"/>
            <end position="483"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_M48" evidence="8">
        <location>
            <begin position="69"/>
            <end position="247"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF01435"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ69565.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="483" mass="51713" checksum="72EF927FB7568A42" modified="2015-12-09" version="1">MRFKARLRMTVLAGAALALAGCQLLGDGTSVGTVAPGTLRPSLAADIGAREHPRVVATYGGVYKDPGAERAVASVVGRLVAASQDPSQSYKITILNSPAINAFALPGGYLYVTRGLLALANDTSEMAAVLAHEMAHVTANHAIKRQERAEARELADQILTDVVQDTEVARKAIVSSQLSFARFSQVQELEADAIGVKTLAKAGFDPYAAARFLRSMAKFAQYQTAGKEGSSAPDFLSSHPSTPERLQIAVRSARQIGAPGIGERDRTRYLSQIDGMLYGDDPLEGFVRGRSFLHKALGIGFTVPSGYILENSPEAVLASNGSGTAIRFDGADVSTYSSLADYMTSGWINGLLPQSVRETTIGGLPAVTGAAITQGWSFRIAVVRIGKTGYRFIFASRSPTDQFDQDFRRTIESFRQLTPTERARLRSLRIKVVTTQAGDTPRKLAVGMSGVEPSRRLEFFSILNDLSPNEAIPAGTSVKLVVD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5G3</accession>
    <name>A0A0M7A5G3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02220</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69712.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671856.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02220"/>
    <dbReference type="EnsemblBacteria" id="CTQ69712">
        <property type="protein sequence ID" value="CTQ69712"/>
        <property type="gene ID" value="LAX5112_02220"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="67"/>
            <end position="84"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69712.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="85" mass="9449" checksum="D9421F6C76075EB4" modified="2015-12-09" version="1">MSTSKHKADQERRDEALRAIDRAQAESETVVGSTFVRMADRARSHMSAADKDADDHIEVWGTRIGRSLGLIFAIGLVIYLAVTYL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5S9</accession>
    <name>A0A0M7A5S9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02178</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69600.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02178"/>
    <dbReference type="EnsemblBacteria" id="CTQ69600">
        <property type="protein sequence ID" value="CTQ69600"/>
        <property type="gene ID" value="LAX5112_02178"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006311">
        <property type="entry name" value="TAT_signal"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008311">
        <property type="entry name" value="UCP028101"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07433">
        <property type="entry name" value="DUF1513"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF028101">
        <property type="entry name" value="UCP028101"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0186">Copper</keyword>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ69600.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="383" mass="40341" checksum="D3AD15BF233CB10C" modified="2015-12-09" version="1">MPLMATRPAEFSRRGFLSALGGLAAFPAFAGSGLGASLLSTSDAPLFASAFKKSAGGYGVAVLDDLGQIQAEISLPGRGHGIAVSETRECFAAFARRPGIFAVVAWPFSGRPMQTIVAAPGRHYYGHGCFAKDGRILYAVENDYEAARGVVGVYDVSGETTARLGEFDSHGIGPHEVLLSKDGNVLIVANGGIETHPDHGREKLNLETMSPSVVFLDVKTGDLLAEHRLDSSLHQLSLRHMALDGTGRAWAGGQFQGSKTDTPPLVAIISRDEAPVLLDLPEKLAGQLENYIGSVTATTDQNVIATSAPRGGKTLFWSAETGDYLGYQNIADGCGVAPIDQGSFLISDGNGGVSYLSEPGERAEILARPAGFAWDNHMTALRI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6B1</accession>
    <name>A0A0M7A6B1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Probable glycine dehydrogenase (decarboxylating) subunit 1</fullName>
            <ecNumber evidence="4">1.4.4.2</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">Glycine cleavage system P-protein subunit 1</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="4">Glycine decarboxylase subunit 1</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="4">Glycine dehydrogenase (aminomethyl-transferring) subunit 1</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="4 5" type="primary">gcvPA</name>
        <name evidence="5" type="ORF">LAX5112_02380</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 4">The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3 4">
            <text>(R)-N(6)-lipoyl-L-lysyl-[glycine-cleavage complex H protein] + glycine + H(+) = (R)-N(6)-(S(8)-aminomethyldihydrolipoyl)-L-lysyl-[glycine-cleavage complex H protein] + CO2</text>
            <dbReference type="Rhea" id="RHEA:24304"/>
            <dbReference type="Rhea" id="RHEA-COMP:10494"/>
            <dbReference type="Rhea" id="RHEA-COMP:10495"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:57305"/>
            <dbReference type="ChEBI" id="CHEBI:83099"/>
            <dbReference type="ChEBI" id="CHEBI:83143"/>
            <dbReference type="EC" id="1.4.4.2"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="4">The glycine cleavage system is composed of four proteins: P, T, L and H. In this organism, the P 'protein' is a heterodimer of two subunits.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the GcvP family. N-terminal subunit subfamily.</text>
    </comment>
    <dbReference type="EC" id="1.4.4.2" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70147.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671997.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02380"/>
    <dbReference type="EnsemblBacteria" id="CTQ70147">
        <property type="protein sequence ID" value="CTQ70147"/>
        <property type="gene ID" value="LAX5112_02380"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004375">
        <property type="term" value="F:glycine dehydrogenase (decarboxylating) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019464">
        <property type="term" value="P:glycine decarboxylation via glycine cleavage system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009116">
        <property type="term" value="P:nucleoside metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00613">
        <property type="entry name" value="GDC-P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00712">
        <property type="entry name" value="GcvPA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023010">
        <property type="entry name" value="GcvPA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020581">
        <property type="entry name" value="GDC_P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42806">
        <property type="entry name" value="PTHR42806"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02347">
        <property type="entry name" value="GDC-P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006815">
        <property type="entry name" value="GcvPA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 4 5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003788"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00033655"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00712"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ70147.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="448" mass="48265" checksum="3201F27D1E3AE7BA" modified="2015-12-09" version="1">MRYLPLTDTDRGDMLARIGVNSIDDLFTDIPEDVRFNGLLDLPKRASEMEVERKLSAMAAKNTSAGSVPFFVGAGAYKHHVPATVDHLIQRSEFLTSYTPYQPEITQGTLQYLFEFQTQVAKLTAMDVANASMYDGSTGTGEAVLMAHRVTKKNKAVLSGGLHPQYREVVEGLSNMAGDQVVSLPADPMGTEDILSQIDDETSCVVVQSPSFYGQLIDLKPIAEKAHQHKALLIAVFTEVVSLGLIEPPGTQGADIVVGEGQSIGNGLNYGGPYVGLFATRQKYVRQMPGRLCGETVDAEGKRGFVLTLSTREQHIRRDKATSNICTNSGLCCLAFTIHMSLLGQKGLTQLARINHGNAVKLKQQLGAVSGVDVLNSAYFNEFTLRLPKAADGVVEALAEKGILAGLPVSRLEPGKADLENLLVVASTEVNTDEDRAAFADALKEVLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6F3</accession>
    <name>A0A0M7A6F3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">MltA-interacting protein MipA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">LAX5112_02025</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the MipA/OmpV family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69214.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02025"/>
    <dbReference type="EnsemblBacteria" id="CTQ69214">
        <property type="protein sequence ID" value="CTQ69214"/>
        <property type="gene ID" value="LAX5112_02025"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009279">
        <property type="term" value="C:cell outer membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010583">
        <property type="entry name" value="MipA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38776">
        <property type="entry name" value="PTHR38776"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06629">
        <property type="entry name" value="MipA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0998">Cell outer membrane</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023237"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ69214.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="310" mass="33421" checksum="65EA65609158DA4C" modified="2015-12-09" version="1">MNLLSFTQVRKCNSLAKPDSVSLCVTCVHAIFALNNFRYNVGLMKKLISRAAVALLAGSLSGAAFAQGGSLSAEDATKQFVIDLGVGAMVKPRYEASDSYLVYPFPLIQMGRFYVPGLGQVVEGRGRTGVFFYPSFGFVGERKASDTTDLTGTNKIDWALELGLGGGFRTQHWRAFGEIRQGINGHNGQVGQVGFDGIMYPGEKWELSFGPRADFASGDYMDTYFGVTSTEASASGGQLSEYNPSAGFKSVGLAARVSYDLNDDVRLHLQGGYDRLVGDAADSPIAKVGSENQFNVGLGFTYRFAFDVFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A708</accession>
    <name>A0A0M7A708_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">FMN dependent NADH:quinone oxidoreductase</fullName>
            <ecNumber evidence="6">1.6.5.-</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Azo-dye reductase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">FMN-dependent NADH-azo compound oxidoreductase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">FMN-dependent NADH-azoreductase</fullName>
            <ecNumber evidence="6">1.7.1.17</ecNumber>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6 8" type="primary">azoR</name>
        <name evidence="8" type="ORF">LAX5112_02569</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Also exhibits azoreductase activity. Catalyzes the reductive cleavage of the azo bond in aromatic azo compounds to the corresponding amines.</text>
    </comment>
    <comment type="function">
        <text evidence="6">Quinone reductase that provides resistance to thiol-specific stress caused by electrophilic quinones.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>2 a quinone + H(+) + NADH = 2 a 1,4-benzosemiquinone + NAD(+)</text>
            <dbReference type="Rhea" id="RHEA:65952"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:132124"/>
            <dbReference type="ChEBI" id="CHEBI:134225"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>anthranilate + N,N-dimethyl-1,4-phenylenediamine + 2 NAD(+) = 2-(4-dimethylaminophenyl)diazenylbenzoate + 2 H(+) + 2 NADH</text>
            <dbReference type="Rhea" id="RHEA:55872"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15783"/>
            <dbReference type="ChEBI" id="CHEBI:16567"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:71579"/>
            <dbReference type="EC" id="1.7.1.17"/>
        </reaction>
        <physiologicalReaction direction="right-to-left" evidence="5">
            <dbReference type="Rhea" id="RHEA:55874"/>
        </physiologicalReaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </cofactor>
        <text evidence="6">Binds 1 FMN per subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the azoreductase type 1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="1.6.5.-" evidence="6"/>
    <dbReference type="EC" id="1.7.1.17" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70669.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040452379.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02569"/>
    <dbReference type="EnsemblBacteria" id="CTQ70669">
        <property type="protein sequence ID" value="CTQ70669"/>
        <property type="gene ID" value="LAX5112_02569"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010181">
        <property type="term" value="F:FMN binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016652">
        <property type="term" value="F:oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016655">
        <property type="term" value="F:oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.360">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01216">
        <property type="entry name" value="Azoreductase_type1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003680">
        <property type="entry name" value="Flavodoxin_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029039">
        <property type="entry name" value="Flavoprotein-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023048">
        <property type="entry name" value="NADH:quinone_OxRdtase_FMN_depd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02525">
        <property type="entry name" value="Flavodoxin_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52218">
        <property type="entry name" value="SSF52218"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 6" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="2 6" id="KW-0288">FMN</keyword>
    <keyword evidence="4 6" id="KW-0520">NAD</keyword>
    <keyword evidence="3 6 8" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Flavodoxin_2" evidence="7">
        <location>
            <begin position="6"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="14"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023925"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01216"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF02525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ70669.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="199" mass="21361" checksum="F93B04FB0FC96346" modified="2015-12-09" version="1">MSSDVKTILHIDASARKTGSVTRELTETLVKSLATANRDAKILTRDVSQGLPFIDETWVGATFTDPAERTPEQRLKLAVSDTLVSELKAADVVVIGTPIYNFSVPAALKAWIDQVARARETFQYTENGPVGLLKDKKAIIAVASGGTQAGSEIDFATTYLKHFLGFLGITDVTVIAADQLMVNPDKRADAISLAEQLAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7T3</accession>
    <name>A0A0M7A7T3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02572</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70677.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70677">
        <property type="protein sequence ID" value="CTQ70677"/>
        <property type="gene ID" value="LAX5112_02572"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ70677.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="246" mass="27899" checksum="D583ED5F4C0075D3" modified="2015-12-09" version="1">MAKIASRDRKLLTNEIGTVLAVTARIQMKMSFMVGIGIRPQYGCKALASGCMDCPQKLARSRLRFRPVFHDRNDIPICEPETGYVDRLAKCVLGKLPIREIVAAPALISRSCQEPGDVHAQLIAGSRKNILPDPIRHHPCKLACDHDRSWKGDFISAFQADFGHGDNIFKSAAVVRLDRHALNKCHTRQVADLFSHPLDHWVCGLAWFCVRLFPRQVDTFKKSVLSAWCERLWRGGWRRNFLTKGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7V3</accession>
    <name>A0A0M7A7V3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Flagellar hook-associated protein FlgL</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02745</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71178.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040450822.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02745"/>
    <dbReference type="EnsemblBacteria" id="CTQ71178">
        <property type="protein sequence ID" value="CTQ71178"/>
        <property type="gene ID" value="LAX5112_02745"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009288">
        <property type="term" value="C:bacterial-type flagellum"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005198">
        <property type="term" value="F:structural molecule activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001492">
        <property type="entry name" value="Flagellin"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42792">
        <property type="entry name" value="PTHR42792"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0966">Cell projection</keyword>
    <keyword evidence="1" id="KW-0969">Cilium</keyword>
    <keyword evidence="1" id="KW-0282">Flagellum</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ71178.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="509" mass="54725" checksum="BBBDC1776000EDE4" modified="2015-12-09" version="1">MPVSSISTSRSYLTSQLLNLNDKLTEKTTQLASGKVGSTYGDIGDRRLLDIQLTQKVSLIESYQETITISNLHLEAMTVSLDRLEDIRRDAKSAMDTNDFVIQSDGQTQTQSRAELLLNEALNILNTEVAGYYPFGGTDAISDPVQAIDTIMNGANGLSGLKDYMSEFSQANLGALNNGRMTVSALTTTPGPLDSTFTIAEDGAHDFGFDISSVTSTLTNVTLTGPGGGDPDTFDVQFTGQPTLGEQIEITLTLPPDHTNTTTITLTAAASNEAEGTFAIGADLEETAQNLRDAIAQELGDTAQTTLKAASDIWASDEFFSTYNGEVPQRIDGPPYTTATALTSGATDTLSWYTGRNTTTTDPRTDKNAIIDTNLTVEYGVRANEEPLQELVQTLATFAAADFSGGAQLDEEYYNALSTDLRAILQPPGIDQSGIVDISTDIAIAHRTASLTDQRHIQVVNTYEATIGEIEGIDQDRLAAEILQLRTNIEVSYNASSIVFNLSLADYLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A813</accession>
    <name>A0A0M7A813_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Galactose/methyl galactoside import ATP-binding protein MglA</fullName>
            <ecNumber evidence="5">3.6.3.17</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">mglA_2</name>
        <name evidence="5" type="ORF">LAX5112_02689</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.6.3.17" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71019.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040450832.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02689"/>
    <dbReference type="EnsemblBacteria" id="CTQ71019">
        <property type="protein sequence ID" value="CTQ71019"/>
        <property type="gene ID" value="LAX5112_02689"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="5"/>
            <end position="249"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="37"/>
            <end position="44"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ71019.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="257" mass="28011" checksum="DDAB7B65E579A816" modified="2015-12-09" version="1">MEPLLQASNLVKRYGRVIAMDHADFELYPGEILAVIGDNGAGKSTLIKALSGAVQPDEGEIRLDGKPVQFHSPIDARAAGIETVYQTLAMSPALSITDNMFMGRELRKPGFRGKWLRQLDHKKMEQIARDKLSELGLLTIQNINQAVETLSGGQRQGVAVARAAAFGSKVVIMDEPTAALGVKESRRVLELITDVKARGLPIVLISHNMPHVFEVADRIHIHRLGRRACVIKPDDFSMSDAVAIMTGAMDPPEDMAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A832</accession>
    <name>A0A0M7A832_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative transposase OrfB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02758</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71258.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ71258">
        <property type="protein sequence ID" value="CTQ71258"/>
        <property type="gene ID" value="LAX5112_02758"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032196">
        <property type="term" value="P:transposition"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038965">
        <property type="entry name" value="InsF-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001584">
        <property type="entry name" value="Integrase_cat-core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46889:SF1">
        <property type="entry name" value="PTHR46889:SF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00665">
        <property type="entry name" value="rve"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13333">
        <property type="entry name" value="rve_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50994">
        <property type="entry name" value="INTEGRASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Integrase catalytic" evidence="1">
        <location>
            <begin position="1"/>
            <end position="123"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50994"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71258.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="123" mass="14660" checksum="47AC0307DA97F63D" modified="2015-12-09" version="1">MRPTDVVLQALLMAVWRRKPKHKVLIHSDQGSQFTSMDWASFLRAHNLEHSMSRRGNCHDNAVAESFFNLLKRERIRRRTYKTRVEARQDVFDYIEMFYKSLDSFDFAAIPKLNKMQVLELAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9I9</accession>
    <name>A0A0M7A9I9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Aldolase II superfamily protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02646</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70900.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672217.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02646"/>
    <dbReference type="EnsemblBacteria" id="CTQ70900">
        <property type="protein sequence ID" value="CTQ70900"/>
        <property type="gene ID" value="LAX5112_02646"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.225.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001303">
        <property type="entry name" value="Aldolase_II/adducin_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036409">
        <property type="entry name" value="Aldolase_II/adducin_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00596">
        <property type="entry name" value="Aldolase_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01007">
        <property type="entry name" value="Aldolase_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53639">
        <property type="entry name" value="SSF53639"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aldolase_II" evidence="1">
        <location>
            <begin position="21"/>
            <end position="203"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM01007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70900.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="254" mass="27860" checksum="1BCE92369E511381" modified="2015-12-09" version="1">MSVVTPLTPSADQKSEQRLREDLAAAFRLAVEFGWHEGVGNHFSAAVSEDGTKFLMNRKWRHFSEVTASNLQLLDANDDSIVETPDAPDPSAWCIHGTVHRLNPAVKVLFHVHPPNATALATLQDPSMKPIDLNTARFFGKVAVDLGFGGMADEAEEGRRIAETLGNKPILIMGNHGVSVAAETVAEAFDHLYYFERAAGTLLTAYATGQPLAVMSDNLAAKTAAEWEPYKGMGHAHFDHLKRQLDKNQPDYRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9K2</accession>
    <name>A0A0M7A9K2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Germination-specific amidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">sleB_2</name>
        <name evidence="3" type="ORF">LAX5112_02458</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70304.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02458"/>
    <dbReference type="EnsemblBacteria" id="CTQ70304">
        <property type="protein sequence ID" value="CTQ70304"/>
        <property type="gene ID" value="LAX5112_02458"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.2520">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011105">
        <property type="entry name" value="Cell_wall_hydrolase_SleB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042047">
        <property type="entry name" value="SleB_dom1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07486">
        <property type="entry name" value="Hydrolase_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Hydrolase_2" evidence="2">
        <location>
            <begin position="290"/>
            <end position="400"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07486"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ70304.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="408" mass="45263" checksum="02AD3CD5577B82A3" modified="2015-12-09" version="1">MSGLKSREVMRFSTRKNQGSRKMGARLRQMSRVLLASPLLFFGLQGQVGNQDIFALINAKHQETPRWMLALEPANFTSRIAPMLDLATPTVPDHTTAPLLTLTSADKDFDAKPVLGLEDIARSVLPDTLPDGIKTNVSSKGNRKITMAPDRHMVDQAAGNLFAMSSLISTEKKHADLPRVAFVKPEPLDEKSSSDEFEPGAPIDLQKVMMARNAAAASFSLVSAYAPDSVKETKEPFDALFGAAKYEQELPPAEDPDNPHWWAQVPLPLSVGSRKEQKCLAEAIYFEARGEPEVGQVAVAQVVLNRVKNPSYPDSICGVVYQNKHKRNRCQFSFACDGIRDRIASPRAWKIAERIARDVTDGKEFLKLVDASTHYHADYVNPRWAKSMAKRGKIGLHIFYKTYAGGWN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9L2</accession>
    <name>A0A0M7A9L2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">His-Xaa-Ser repeat protein HxsA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">LAX5112_02463</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Cell wall biogenesis; peptidoglycan biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the YkuD family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70314.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02463"/>
    <dbReference type="EnsemblBacteria" id="CTQ70314">
        <property type="protein sequence ID" value="CTQ70314"/>
        <property type="gene ID" value="LAX5112_02463"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00219"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071972">
        <property type="term" value="F:peptidoglycan L,D-transpeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd16913">
        <property type="entry name" value="YkuD_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.101.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.440.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005490">
        <property type="entry name" value="LD_TPept_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002477">
        <property type="entry name" value="Peptidoglycan-bd-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036365">
        <property type="entry name" value="PGBD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036366">
        <property type="entry name" value="PGBDSf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038063">
        <property type="entry name" value="Transpep_catalytic_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016915">
        <property type="entry name" value="UCP029342"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01471">
        <property type="entry name" value="PG_binding_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03734">
        <property type="entry name" value="YkuD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF029342">
        <property type="entry name" value="UCP029342_ErfK/YbiS/YcfS/YnhG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141523">
        <property type="entry name" value="SSF141523"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47090">
        <property type="entry name" value="SSF47090"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="YkuD" evidence="5">
        <location>
            <begin position="57"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="domain" description="PG_binding_1" evidence="4">
        <location>
            <begin position="245"/>
            <end position="293"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004752"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF01471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF03734"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ70314.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="413" mass="45003" checksum="A51D112EA62B97FF" modified="2015-12-09" version="1">MFVTKYGERPSKSRGASRMFSQLACAAFLTLSAGSTSLASEAVEGTLDEVQKQDPLHFLVSLDEQRIDVYRGSELIETSPISSGKRGNSTPTGVFSILEKRRKHFSNLYDNAPMPFMQRLTWSGIALHQGKLPGYPASHGCIRLPRSFAKSIFGMTARGNHVVVTRAAATPMPVTHSALPQPLSPSTKVASLSAQNIAMDPALRGAIQPAVLQTPIAAAEPENPHFNRPLRMIITPQKPPSKNKVLQRLLNELGYNAGPVDGVVGRKTRAAIELYQEGADLPITGNITDSLVARIYREAGYEKPHNAKLRVRRKFRDVYSAPVTIKGTGEDIGTHVFTALDFKQGDPSVEWIAVSAEGERGGASYEILDRLEIPQKVAEDLSKMLTPGTSLTVTDRSFQRNTGLGTDFVVITR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9R7</accession>
    <name>A0A0M7A9R7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">NADPH azoreductase</fullName>
            <ecNumber evidence="2">1.7.1.6</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">azr_4</name>
        <name evidence="2" type="ORF">LAX5112_02882</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.7.1.6" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71609.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672398.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02882"/>
    <dbReference type="EnsemblBacteria" id="CTQ71609">
        <property type="protein sequence ID" value="CTQ71609"/>
        <property type="gene ID" value="LAX5112_02882"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050446">
        <property type="term" value="F:azobenzene reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.360">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029039">
        <property type="entry name" value="Flavoprotein-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005025">
        <property type="entry name" value="FMN_Rdtase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03358">
        <property type="entry name" value="FMN_red"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52218">
        <property type="entry name" value="SSF52218"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FMN_red" evidence="1">
        <location>
            <begin position="1"/>
            <end position="150"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03358"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71609.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="214" mass="23306" checksum="CFBBF00569BADBAC" modified="2015-12-09" version="1">MKILVFLGSVRQSTPPRPARLGERVARACAAHLGRASAEVEIIDPLNLEPQPVFKPHFAYAAGRAPEALEVLSDTIKDADGYVMVSPEYNHSMSPALADLLNHFGSSSFSFKPSAIATYSAGQWGGARAAVNMRTYLSELGCLPVSAMIHVPKAQDVFDEAGRYLEGVDANKWDGYIGRTLRQLTWWAEAAKCQRQQAVATEAFDTDPSQRNAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AC56</accession>
    <name>A0A0M7AC56_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Transcriptional regulatory protein BaeR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">baeR_2</name>
        <name evidence="6" type="ORF">LAX5112_03099</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72211.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672580.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03099"/>
    <dbReference type="EnsemblBacteria" id="CTQ72211">
        <property type="protein sequence ID" value="CTQ72211"/>
        <property type="gene ID" value="LAX5112_03099"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00383">
        <property type="entry name" value="trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001867">
        <property type="entry name" value="OmpR/PhoB-type_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016032">
        <property type="entry name" value="Sig_transdc_resp-reg_C-effctor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039420">
        <property type="entry name" value="WalR-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48111">
        <property type="entry name" value="PTHR48111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00486">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00862">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46894">
        <property type="entry name" value="SSF46894"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51755">
        <property type="entry name" value="OMPR_PHOB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="4">
        <location>
            <begin position="18"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="domain" description="OmpR/PhoB-type" evidence="5">
        <location>
            <begin position="145"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="OmpR/PhoB-type" evidence="3">
        <location>
            <begin position="145"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="2">
        <location>
            <position position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ72211.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="247" mass="27516" checksum="105F5F05C315DA68" modified="2015-12-09" version="1">MTSERSSHSKPLTAGKTRAFIVDDEPEIGRLLIEAMQPFDMEGEVFSTAAQMLAALEADTPDACIVDLGLPDMEGMALINEIRRHSSVPIIVLSARAHATDRVLGLELGADDYVVKPFDPREVVARIRSILRRSGGETVRAAKREETAHFADWSYKPSSHCLTSPEGEETFLSTGEATLLEALLRAPKRVLTRDYLLEHGGRDESLDRSIDVRISRIRKKLNRKDGPAHIRTIYGSGYMLTCDVRWD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AC96</accession>
    <name>A0A0M7AC96_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Arabinose 5-phosphate isomerase KdsD</fullName>
            <ecNumber evidence="8">5.3.1.13</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">kdsD_2</name>
        <name evidence="8" type="ORF">LAX5112_03113</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the SIS family. GutQ/KpsF subfamily.</text>
    </comment>
    <dbReference type="EC" id="5.3.1.13" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72251.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03113"/>
    <dbReference type="EnsemblBacteria" id="CTQ72251">
        <property type="protein sequence ID" value="CTQ72251"/>
        <property type="gene ID" value="LAX5112_03113"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019146">
        <property type="term" value="F:arabinose-5-phosphate isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0097367">
        <property type="term" value="F:carbohydrate derivative binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901135">
        <property type="term" value="P:carbohydrate derivative metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd05014">
        <property type="entry name" value="SIS_Kpsf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.580.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000644">
        <property type="entry name" value="CBS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046342">
        <property type="entry name" value="CBS_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004800">
        <property type="entry name" value="KdsD/KpsF-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001347">
        <property type="entry name" value="SIS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046348">
        <property type="entry name" value="SIS_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035474">
        <property type="entry name" value="SIS_Kpsf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00571">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01380">
        <property type="entry name" value="SIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004692">
        <property type="entry name" value="KdsD_KpsF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00116">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53697">
        <property type="entry name" value="SSF53697"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54631">
        <property type="entry name" value="SSF54631"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00393">
        <property type="entry name" value="kpsF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51371">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51464">
        <property type="entry name" value="SIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0129">CBS domain</keyword>
    <keyword evidence="8" id="KW-0413">Isomerase</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="SIS" evidence="7">
        <location>
            <begin position="36"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="domain" description="CBS" evidence="6">
        <location>
            <begin position="204"/>
            <end position="262"/>
        </location>
    </feature>
    <feature type="domain" description="CBS" evidence="6">
        <location>
            <begin position="269"/>
            <end position="320"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="77"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="site" description="Catalytically relevant" evidence="4">
        <location>
            <position position="54"/>
        </location>
    </feature>
    <feature type="site" description="Catalytically relevant" evidence="4">
        <location>
            <position position="106"/>
        </location>
    </feature>
    <feature type="site" description="Catalytically relevant" evidence="4">
        <location>
            <position position="147"/>
        </location>
    </feature>
    <feature type="site" description="Catalytically relevant" evidence="4">
        <location>
            <position position="188"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008165"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRNR" id="PIRNR004692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR004692-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR004692-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00703"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51371"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ72251.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="320" mass="33359" checksum="DD6AC6D08BEF1757" modified="2015-12-09" version="1">MEYIVSAERALETEMAGLSALRVALKDGLAAPFQKACSLIQSISGRVIVSGIGKSGHIGTKIAASLASTGTPAFFVHATEASHGDLGMITQDDVVLALSWSGETQELASLVAYTRRFKVPLVAMTSRLDSTLGNASDIVLKLPSVAEACPHGLAPTTSALVQLALGDALTVALLEGRGFTVQDYKLFHPGGRLGASLKSAKDIMHSGEALPLVTASTPMTDGIVVMSQKGFGVLGVVDELNQLMGIITDGDLRRHVTSNLLEKTAGDIMTRGPKTVHPGALSASILELLNSSSITTVFVVEDSRPVGIVHMHDLLRVGAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACA7</accession>
    <name>A0A0M7ACA7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Light-independent protochlorophyllide reductase subunit B</fullName>
            <shortName evidence="11">DPOR subunit B</shortName>
            <shortName evidence="11">LI-POR subunit B</shortName>
            <ecNumber evidence="11">1.3.7.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="primary">chlB_1</name>
        <name evidence="11" type="synonym">bchB</name>
        <name evidence="14" type="ORF">LAX5112_02946</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11">Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (BchN-BchB) is the catalytic component of the complex.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="11">
            <text>2 ADP + chlorophyllide a + oxidized 2[4Fe-4S]-[ferredoxin] + 2 phosphate = 2 ATP + 2 H2O + protochlorophyllide a + reduced 2[4Fe-4S]-[ferredoxin]</text>
            <dbReference type="Rhea" id="RHEA:28202"/>
            <dbReference type="Rhea" id="RHEA-COMP:10002"/>
            <dbReference type="Rhea" id="RHEA-COMP:10004"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33722"/>
            <dbReference type="ChEBI" id="CHEBI:33723"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:83348"/>
            <dbReference type="ChEBI" id="CHEBI:83350"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="1.3.7.7"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="11">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
        <text evidence="11">Binds 1 [4Fe-4S] cluster per heterodimer. The cluster is bound at the heterodimer interface by residues from both subunits.</text>
    </comment>
    <comment type="pathway">
        <text evidence="11">Porphyrin-containing compound metabolism; bacteriochlorophyll biosynthesis (light-independent).</text>
    </comment>
    <comment type="subunit">
        <text evidence="11">Protochlorophyllide reductase is composed of three subunits; BchL, BchN and BchB. Forms a heterotetramer of two BchB and two BchN subunits.</text>
    </comment>
    <comment type="similarity">
        <text evidence="11">Belongs to the ChlB/BchB/BchZ family.</text>
    </comment>
    <dbReference type="EC" id="1.3.7.7" evidence="11"/>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71840.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672461.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02946"/>
    <dbReference type="EnsemblBacteria" id="CTQ71840">
        <property type="protein sequence ID" value="CTQ71840"/>
        <property type="gene ID" value="LAX5112_02946"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00671"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016730">
        <property type="term" value="F:oxidoreductase activity, acting on iron-sulfur proteins as donors"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016636">
        <property type="term" value="F:oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0036070">
        <property type="term" value="P:light-independent bacteriochlorophyll biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019685">
        <property type="term" value="P:photosynthesis, dark reaction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.550">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00353">
        <property type="entry name" value="ChlB_BchB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013580">
        <property type="entry name" value="LI-POR_suB-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000510">
        <property type="entry name" value="Nase/OxRdtase_comp1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042298">
        <property type="entry name" value="P-CP_red_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005969">
        <property type="entry name" value="Protochl_reductB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016209">
        <property type="entry name" value="Protochlorophyllide_Rdtase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00148">
        <property type="entry name" value="Oxidored_nitro"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08369">
        <property type="entry name" value="PCP_red"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000163">
        <property type="entry name" value="PCP_ChlB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01278">
        <property type="entry name" value="DPOR_BchB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 11" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="5 11" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="10 11" id="KW-0077">Bacteriochlorophyll biosynthesis</keyword>
    <keyword evidence="9 11" id="KW-0149">Chlorophyll biosynthesis</keyword>
    <keyword evidence="7 11" id="KW-0408">Iron</keyword>
    <keyword evidence="8 11" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="3 11" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4 11" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6 11 14" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2 11" id="KW-0602">Photosynthesis</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Oxidored_nitro" evidence="12">
        <location>
            <begin position="13"/>
            <end position="411"/>
        </location>
    </feature>
    <feature type="domain" description="PCP_red" evidence="13">
        <location>
            <begin position="471"/>
            <end position="515"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="11">
        <location>
            <begin position="414"/>
            <end position="415"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="11">
        <location>
            <position position="279"/>
        </location>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="36"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <note>ligand shared with heterodimeric partner</note>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022531"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023181"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00353"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF00148"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF08369"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="CTQ71840.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="520" mass="57333" checksum="D8A1308359A5C24E" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACI8</accession>
    <name>A0A0M7ACI8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Stalked cell differentiation-controlling protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">pleD_3</name>
        <name evidence="5" type="ORF">LAX5112_03066</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72126.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672538.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03066"/>
    <dbReference type="EnsemblBacteria" id="CTQ72126">
        <property type="protein sequence ID" value="CTQ72126"/>
        <property type="gene ID" value="LAX5112_03066"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06170">
        <property type="entry name" value="LuxR_C_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016032">
        <property type="entry name" value="Sig_transdc_resp-reg_C-effctor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000792">
        <property type="entry name" value="Tscrpt_reg_LuxR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039420">
        <property type="entry name" value="WalR-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48111">
        <property type="entry name" value="PTHR48111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00196">
        <property type="entry name" value="GerE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00038">
        <property type="entry name" value="HTHLUXR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00421">
        <property type="entry name" value="HTH_LUXR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46894">
        <property type="entry name" value="SSF46894"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50043">
        <property type="entry name" value="HTH_LUXR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="4">
        <location>
            <begin position="7"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="domain" description="HTH luxR-type" evidence="3">
        <location>
            <begin position="234"/>
            <end position="299"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="2">
        <location>
            <position position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ72126.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="302" mass="32885" checksum="59F356F354311954" modified="2015-12-09" version="1">MDNRRDTVLVVDDSPDSLSFVTEALKKTGVAVLVATNGEAALSICERVTPDTILMDAVMPGLDGFETCRKLKENQGLQHVPVIFMTGLSETEHIVKALDCGGVDFLTKPIDVDELKARIKVHLRNARSVQSAHVALDAAGRHLVAVSSEGAILWTTPQIHTLLARTGAADATLFQLGRALGEWLESGADTPRRGSFMLGLSEELAVQLYPLGRVGPDENLFRVTSEDEEGQVRALQVEFQLTQREAEVLIWIAKGKSNKDIGEILNLSPRTVNKHLEQIFVKLGVENRASAAVRAAEVMFAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACK1</accession>
    <name>A0A0M7ACK1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Hemolysin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">LAX5112_03330</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72845.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672748.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03330"/>
    <dbReference type="EnsemblBacteria" id="CTQ72845">
        <property type="protein sequence ID" value="CTQ72845"/>
        <property type="gene ID" value="LAX5112_03330"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004254">
        <property type="entry name" value="AdipoR/HlyIII-related"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20855">
        <property type="entry name" value="PTHR20855"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03006">
        <property type="entry name" value="HlyIII"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="21"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="54"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="85"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="112"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="139"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="165"/>
            <end position="186"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="198"/>
            <end position="219"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ72845.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="222" mass="23725" checksum="DFC5F654B1848393" modified="2015-12-09" version="1">MAQNRPQPRHQTIGELIADGTIHVIGIGLGVAATIILTLTLWNSGDLARQVSVLVYAACLMAMLICSALYNMFAKDHKAGVLRRLDHAAIFLMIAGTYTPLAAMIIGGWTGGVLLAVVWSGALTGAIVKLLNLQGMDRLTVPICLGLGWVVVFVVKPLMENASAFGFWMIVAGGLLYTIGTVFYAWKNLLFQNAIWHAFVLAAAVCHFAAVLHDVALAAPMP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEY1</accession>
    <name>A0A0M7AEY1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase</fullName>
            <shortName evidence="7">UDP-N-acetylglucosamine acyltransferase</shortName>
            <ecNumber evidence="7">2.3.1.129</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7 9" type="primary">lpxA</name>
        <name evidence="9" type="ORF">LAX5112_03453</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>a (3R)-hydroxyacyl-[ACP] + UDP-N-acetyl-alpha-D-glucosamine = a UDP-3-O-[(3R)-3-hydroxyacyl]-N-acetyl-alpha-D-glucosamine + holo-[ACP]</text>
            <dbReference type="Rhea" id="RHEA:67812"/>
            <dbReference type="Rhea" id="RHEA-COMP:9685"/>
            <dbReference type="Rhea" id="RHEA-COMP:9945"/>
            <dbReference type="ChEBI" id="CHEBI:57705"/>
            <dbReference type="ChEBI" id="CHEBI:64479"/>
            <dbReference type="ChEBI" id="CHEBI:78827"/>
            <dbReference type="ChEBI" id="CHEBI:173225"/>
            <dbReference type="EC" id="2.3.1.129"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="7">Glycolipid biosynthesis; lipid IV(A) biosynthesis; lipid IV(A) from (3R)-3-hydroxytetradecanoyl-[acyl-carrier-protein] and UDP-N-acetyl-alpha-D-glucosamine: step 1/6.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Homotrimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the transferase hexapeptide repeat family. LpxA subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.129" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73187.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672856.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03453"/>
    <dbReference type="EnsemblBacteria" id="CTQ73187">
        <property type="protein sequence ID" value="CTQ73187"/>
        <property type="gene ID" value="LAX5112_03453"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00359">
        <property type="reaction ID" value="UER00477"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008780">
        <property type="term" value="F:acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009245">
        <property type="term" value="P:lipid A biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd03351">
        <property type="entry name" value="LbH_UDP-GlcNAc_AT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1180.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00387">
        <property type="entry name" value="LpxA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029098">
        <property type="entry name" value="Acetyltransf_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037157">
        <property type="entry name" value="Acetyltransf_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001451">
        <property type="entry name" value="Hexapep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018357">
        <property type="entry name" value="Hexapep_transf_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010137">
        <property type="entry name" value="Lipid_A_LpxA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011004">
        <property type="entry name" value="Trimer_LpxA-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43480">
        <property type="entry name" value="PTHR43480"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13720">
        <property type="entry name" value="Acetyltransf_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00132">
        <property type="entry name" value="Hexapep"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000456">
        <property type="entry name" value="UDP-GlcNAc_acltr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51161">
        <property type="entry name" value="SSF51161"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01852">
        <property type="entry name" value="lipid_A_lpxA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00101">
        <property type="entry name" value="HEXAPEP_TRANSFERASES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7 9" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2 7" id="KW-0441">Lipid A biosynthesis</keyword>
    <keyword evidence="1 7" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="5 7" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0677">Repeat</keyword>
    <keyword evidence="3 7 9" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Acetyltransf_11" evidence="8">
        <location>
            <begin position="176"/>
            <end position="256"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022556"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00387"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF13720"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ73187.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="262" mass="27448" checksum="6F2A9093C43E076E" modified="2015-12-09" version="1">MVDIHPTAIIEDGAKIGAGVRIGPYCVIGSQVTLGDNVELKSHVALAGDTTIGAGTAIFPFASVGHQAQDLKFRGEAATLTIGEGCIIREGVTINPGTEGGGLSTTIGNNCAFLANSHVGHDSHLGDRVILSNNVMIAGHVTVGSNVIFGGGSAVIQFTRIGDNAFVGGMAGLENDLIPFGMVTGNRANLGGLNLIGLKRANFPREQIHALRAAYKALFESNEGTLRTRAEEIAETTQDQPLVKKVTDFILQEEDRRFCTPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEZ6</accession>
    <name>A0A0M7AEZ6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="12">Transcriptional regulatory protein ZraR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">zraR_3</name>
        <name evidence="12" type="ORF">LAX5112_03140</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72323.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672606.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03140"/>
    <dbReference type="EnsemblBacteria" id="CTQ72323">
        <property type="protein sequence ID" value="CTQ72323"/>
        <property type="gene ID" value="LAX5112_03140"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002197">
        <property type="entry name" value="HTH_Fis"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002078">
        <property type="entry name" value="Sigma_54_int"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025662">
        <property type="entry name" value="Sigma_54_int_dom_ATP-bd_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025943">
        <property type="entry name" value="Sigma_54_int_dom_ATP-bd_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025944">
        <property type="entry name" value="Sigma_54_int_dom_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02954">
        <property type="entry name" value="HTH_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00158">
        <property type="entry name" value="Sigma54_activat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01590">
        <property type="entry name" value="HTHFIS"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00675">
        <property type="entry name" value="SIGMA54_INTERACT_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00676">
        <property type="entry name" value="SIGMA54_INTERACT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00688">
        <property type="entry name" value="SIGMA54_INTERACT_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50045">
        <property type="entry name" value="SIGMA54_INTERACT_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0010">Activator</keyword>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0804">Transcription</keyword>
    <keyword evidence="4" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="3" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="domain" description="Response regulatory" evidence="11">
        <location>
            <begin position="7"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="domain" description="Sigma-54 factor interaction" evidence="10">
        <location>
            <begin position="149"/>
            <end position="379"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="420"/>
            <end position="440"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="9">
        <location>
            <begin position="422"/>
            <end position="436"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="8">
        <location>
            <position position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023159"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50045"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ72323.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="520" mass="56243" checksum="050CEE8243CDED87" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AF14</accession>
    <name>A0A0M7AF14_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Twin-arg-translocated uncharacterized repeat protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03407</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ73022.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03407"/>
    <dbReference type="EnsemblBacteria" id="CTQ73022">
        <property type="protein sequence ID" value="CTQ73022"/>
        <property type="gene ID" value="LAX5112_03407"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039448">
        <property type="entry name" value="Beta_helix"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022388">
        <property type="entry name" value="CHP03808"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006626">
        <property type="entry name" value="PbH1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012334">
        <property type="entry name" value="Pectin_lyas_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011050">
        <property type="entry name" value="Pectin_lyase_fold/virulence"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13229">
        <property type="entry name" value="Beta_helix"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00710">
        <property type="entry name" value="PbH1"/>
        <property type="match status" value="9"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51126">
        <property type="entry name" value="SSF51126"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03808">
        <property type="entry name" value="RR_plus_rpt_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Beta_helix" evidence="1">
        <location>
            <begin position="190"/>
            <end position="347"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73022.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="427" mass="44358" checksum="664FC48C80B03155" modified="2015-12-09" version="1">MDVADLRGSIDSADLGLIPNATNDQTAQFQNAVNRAVERGRALFLPAGTYPVANLRLPSGTLIVGVPGRTRLVYQGGGGQLIRAEGVSNIGLTGITFDGANRSIGDFTDGLLHFIGVRNLAIDECEIAGSTKSGLLLDRCSGRIENSRISGAAEAGIRSNEATGLSVIGNTVADCANGGIWIHRWQDGEDGTIVSGNRIERIGARYGGTGQFGNGINVFRATGVVVSNNRVADCAFSAIRSNAGSNIQIIGNSCLRSGETAIYSEFGFQGAVIANNIADGGTIGISIANFADDGRLAVCSGNLIRNIKDTGPYPPDVAGFGIGIAAEADTTITGNVIEGVPKYGMLLGWGPYMRNIIASQNVLRDCNIGIAVSVADGVGPAVITNNIVQGAKQGSINGFRWLERATGELNGTSEFSNLTVHSNQIWG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AF67</accession>
    <name>A0A0M7AF67_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">NADH-quinone oxidoreductase subunit K</fullName>
            <ecNumber evidence="7">7.1.1.-</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">NADH dehydrogenase I subunit K</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">NDH-1 subunit K</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7 8" type="primary">nuoK</name>
        <name evidence="8" type="ORF">LAX5112_03479</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>a quinone + 5 H(+)(in) + NADH = a quinol + 4 H(+)(out) + NAD(+)</text>
            <dbReference type="Rhea" id="RHEA:57888"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:24646"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:132124"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="7">NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cell membrane</location>
            <topology evidence="7">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the complex I subunit 4L family.</text>
    </comment>
    <dbReference type="EC" id="7.1.1.-" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73261.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008192836.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03479"/>
    <dbReference type="EnsemblBacteria" id="CTQ73261">
        <property type="protein sequence ID" value="CTQ73261"/>
        <property type="gene ID" value="LAX5112_03479"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050136">
        <property type="term" value="F:NADH dehydrogenase (quinone) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048038">
        <property type="term" value="F:quinone binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042773">
        <property type="term" value="P:ATP synthesis coupled electron transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01456">
        <property type="entry name" value="NDH1_NuoK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001133">
        <property type="entry name" value="NADH_UbQ_OxRdtase_chain4L/K"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039428">
        <property type="entry name" value="NUOK/Mnh_C1-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11434">
        <property type="entry name" value="PTHR11434"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00420">
        <property type="entry name" value="Oxidored_q2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0520">NAD</keyword>
    <keyword evidence="8" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4 7" id="KW-0874">Quinone</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-1278">Translocase</keyword>
    <keyword evidence="3 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2 7" id="KW-0813">Transport</keyword>
    <keyword evidence="7" id="KW-0830">Ubiquinone</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="6"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="32"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="62"/>
            <end position="85"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022719"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01456"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ73261.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="102" mass="10961" checksum="497ACAF7CD839500" modified="2015-12-09" version="1">MEIGLSHYLSVAAILFVIGIFGIFLNRKNVIVILMSVELLLLAVNINFVAFSSFLGDLIGQVFTMLILTVAAAEAAIGLAILVVFHRNRGSIAVEDVNVMKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFC8</accession>
    <name>A0A0M7AFC8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Hydrogenobyrinate a,c-diamide synthase</fullName>
            <ecNumber evidence="4">6.3.5.9</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">Hydrogenobyrinic acid a,c-diamide synthase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="primary">cobB_2</name>
        <name evidence="4" type="synonym">cobB</name>
        <name evidence="7" type="ORF">LAX5112_03654</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L-glutamine or ammonia as the nitrogen source.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>2 ATP + 2 H2O + hydrogenobyrinate + 2 L-glutamine = 2 ADP + 2 H(+) + hydrogenobyrinate a,c-diamide + 2 L-glutamate + 2 phosphate</text>
            <dbReference type="Rhea" id="RHEA:12544"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="ChEBI" id="CHEBI:77873"/>
            <dbReference type="ChEBI" id="CHEBI:77874"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.5.9"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 4">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="4">Cofactor biosynthesis; adenosylcobalamin biosynthesis; cob(II)yrinate a,c-diamide from precorrin-2 (aerobic route): step 9/10.</text>
    </comment>
    <comment type="domain">
        <text evidence="4">Comprises of two domains. The C-terminal domain contains the binding site for glutamine and catalyzes the hydrolysis of this substrate to glutamate and ammonia. The N-terminal domain is anticipated to bind ATP and hydrogenobyrinate and catalyzes the ultimate synthesis of the diamide product. The ammonia produced via the glutaminase domain is probably translocated to the adjacent domain via a molecular tunnel, where it reacts with an activated intermediate.</text>
    </comment>
    <comment type="miscellaneous">
        <text evidence="4">The a and c carboxylates of hydrogenobyrinate are activated for nucleophilic attack via formation of a phosphorylated intermediate by ATP. CobB catalyzes first the amidation of the c-carboxylate, and then that of the a-carboxylate.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the CobB/CbiA family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the CobB/CobQ family. CobQ subfamily.</text>
    </comment>
    <dbReference type="EC" id="6.3.5.9" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73778.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672997.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03654"/>
    <dbReference type="EnsemblBacteria" id="CTQ73778">
        <property type="protein sequence ID" value="CTQ73778"/>
        <property type="gene ID" value="LAX5112_03654"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00148">
        <property type="reaction ID" value="UER00220"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042242">
        <property type="term" value="F:cobyrinic acid a,c-diamide synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043802">
        <property type="term" value="F:hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009236">
        <property type="term" value="P:cobalamin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006541">
        <property type="term" value="P:glutamine metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00027">
        <property type="entry name" value="CobB_CbiA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004484">
        <property type="entry name" value="CbiA_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002586">
        <property type="entry name" value="CobQ/CobB/MinD/ParA_Nub-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011698">
        <property type="entry name" value="GATase_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43873">
        <property type="entry name" value="PTHR43873"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01656">
        <property type="entry name" value="CbiA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07685">
        <property type="entry name" value="GATase_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="SSF52317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00379">
        <property type="entry name" value="cobB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0169">Cobalamin biosynthesis</keyword>
    <keyword evidence="3 4" id="KW-0315">Glutamine amidotransferase</keyword>
    <keyword evidence="4" id="KW-0436">Ligase</keyword>
    <keyword evidence="4" id="KW-0460">Magnesium</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CbiA" evidence="5">
        <location>
            <begin position="11"/>
            <end position="193"/>
        </location>
    </feature>
    <feature type="domain" description="GATase_3" evidence="6">
        <location>
            <begin position="249"/>
            <end position="434"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="4">
        <location>
            <position position="332"/>
        </location>
    </feature>
    <feature type="site" description="Increases nucleophilicity of active site Cys" evidence="4">
        <location>
            <position position="432"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006205"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF01656"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF07685"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ73778.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="445" mass="46816" checksum="DE1E259563F0C5AF" modified="2015-12-09" version="1">MQVNSDGPKGLLIAAPSSGAGKTTVTLALLRAFKNAGLSVVSAKSGPDYIDPKFHEAASGTPCINLDAWAMDGGTLRTLAGSHAAGHDLLIAEGAMGLFDGAANGRGSAADLARSLQLPVILVVDCAKQAQSVAALVSGFKHFRSDVQVTGVILNRVGSARHEVMLRAALSGLDIAVFGAIPRNSDLVLPERHLGLVQAQEHPELEAFLDAAASICEDHLDLNGIRTLAQSIATPDDELCQLPSPLGQRISVARDIAFAFSYVHLLEYWRRMGAEISFFSPLANEAPDSDADAIYLPGGYPELHAGKLTEAQTFLSGVQAAAENGALIYGECGGYMILGDGLVDADSCRHKMLGLLPLETSFQTRKRHLGYRKVTSKTGAPWSGSLAAHEFHYASVAREGAVDGLFSASDASGHGLPDMGLRVENVMGSFAHVISRYQATSSTQS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFK3</accession>
    <name>A0A0M7AFK3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03528</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73391.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451905.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ73391">
        <property type="protein sequence ID" value="CTQ73391"/>
        <property type="gene ID" value="LAX5112_03528"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ73391.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="69" mass="7670" checksum="6650596E826D848C" modified="2015-12-09" version="1">MKSAALKICALGRVDELETYFVSQVPRYGGDGPVEHIDIRSKDRRYQIAGTWLTLWAVFAVLNSSANPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFR4</accession>
    <name>A0A0M7AFR4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Bacterial extracellular solute-binding proteins, family 3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_03417</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ73050.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451688.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03417"/>
    <dbReference type="EnsemblBacteria" id="CTQ73050">
        <property type="protein sequence ID" value="CTQ73050"/>
        <property type="gene ID" value="LAX5112_03417"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809458" evidence="2">
        <location>
            <begin position="22"/>
            <end position="245"/>
        </location>
    </feature>
    <feature type="domain" description="PBPb" evidence="3">
        <location>
            <begin position="49"/>
            <end position="229"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00497"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ73050.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="245" mass="26771" checksum="BE2E574AE8909DA5" modified="2015-12-09" version="1">MLCRFYAFCFVVLVWAFPSQAEQDTLVISTIENSPLTKIAEIIMTQAYERLGIPVEIYPTSGNRSLVISSSGKVDGELVRIGAVKEHYPTLVQVPVPNMELKGVVYVRAADKDQIVTGNLAKLRVGYLEGIVQAEQFTQGFENLWAGQSETELFRLLAAGRLDAVVSDQIDGALAIAELGLTDVVPLGRPFQVEPMFHYLHEKQADLVPQLAAILAEMRGSGELEKIVETALEAMITGQGHPSAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AG11</accession>
    <name>A0A0M7AG11_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Ribonuclease Z</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03227</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72564.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672655.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72564">
        <property type="protein sequence ID" value="CTQ72564"/>
        <property type="gene ID" value="LAX5112_03227"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.15.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001279">
        <property type="entry name" value="Metallo-B-lactamas"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036866">
        <property type="entry name" value="RibonucZ/Hydroxyglut_hydro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006311">
        <property type="entry name" value="TAT_signal"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00753">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00849">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56281">
        <property type="entry name" value="SSF56281"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809318" evidence="1">
        <location>
            <begin position="35"/>
            <end position="323"/>
        </location>
    </feature>
    <feature type="domain" description="Lactamase_B" evidence="2">
        <location>
            <begin position="99"/>
            <end position="296"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ72564.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="323" mass="34160" checksum="BA169363227A3FE3" modified="2015-12-09" version="1">MSDIQVQLTRRTALLGAGAAAVGAGVMSSGAVHAAAEKQGPMAAPVARYNVGSFEVNTLLDGAVTVGEPQKTFGMNVDADTFAAKSAESFIPADSFKAFFTPTIVNTGTELVLFDTGVGEGGRPARGNMRAALESAGYTPEQVDVVVITHMHPDHIGGLMEGGAPAFPNARYVIAQKEYDFWAGMDPEANGVTKLMTKNVKPLADKMTFLDDGGRVAGGITAMAAYGHTPGHTLYMLEDGGQQLLLAADLANHYVWSLARPDWEVRFDMDKEAAAASRTSVLSMLASDRIPFVGYHMPFPAVGYVATDGDGFRYVPASYQLSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AG38</accession>
    <name>A0A0M7AG38_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Phosphate-import protein PhnD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">phnD_3</name>
        <name evidence="4" type="ORF">LAX5112_03526</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the phosphate/phosphite/phosphonate binding protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73386.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03526"/>
    <dbReference type="EnsemblBacteria" id="CTQ73386">
        <property type="protein sequence ID" value="CTQ73386"/>
        <property type="gene ID" value="LAX5112_03526"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015716">
        <property type="term" value="P:organic phosphonate transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005770">
        <property type="entry name" value="PhnD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017797">
        <property type="entry name" value="Phosphnate-bd"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01098">
        <property type="entry name" value="3A0109s03R"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03431">
        <property type="entry name" value="PhnD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809638" evidence="3">
        <location>
            <begin position="24"/>
            <end position="335"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007162"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ73386.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="335" mass="37187" checksum="5A2EC8BC3734FDE8" modified="2015-12-09" version="1">MKLITRIAASAAIMVGLSGPALAERENPEELYFGILSTESSSAQREKWGPFLEAMEASLGMPVKPFFAADYAGVIEGMRFDKVDVVWYGNKSAMVAVDRAGAEIFAQTTEATGDRGYWSVMVTHKDSGLTYEDVMACNKDLNFGIGDPNSTSGFLVPSTFVFAKEGVNPKDCFKTLRNANHETNLISVATKQVDAAVASSTGMYSRLKNAKPELFAELKEIWRSPLIASDPMAWRPELDESIKSKIIYFFMTYGRQGTDEEVAKARENLAMIDMGPFIPSSNAQLWPFYEMDQIRQRMSIEGDDTYSDDERTAKILEINTKIEEIRAAAAARPRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGS3</accession>
    <name>A0A0M7AGS3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Outer membrane flp protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">fadL_2</name>
        <name evidence="9" type="ORF">LAX5112_03309</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell outer membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the OmpP1/FadL family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72804.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672731.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03309"/>
    <dbReference type="EnsemblBacteria" id="CTQ72804">
        <property type="protein sequence ID" value="CTQ72804"/>
        <property type="gene ID" value="LAX5112_03309"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009279">
        <property type="term" value="C:cell outer membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005017">
        <property type="entry name" value="OMPP1/FadL/TodX"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35093">
        <property type="entry name" value="PTHR35093"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03349">
        <property type="entry name" value="Toluene_X"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0998">Cell outer membrane</keyword>
    <keyword evidence="6" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-0732">Signal</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <feature type="signal peptide" evidence="8">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809334" evidence="8">
        <location>
            <begin position="27"/>
            <end position="398"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004571"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023237"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ72804.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="398" mass="43572" checksum="740A108FBDE5F32D" modified="2015-12-09" version="1">MGTLKVLAANLMIGGTVLCCLSPAYAGGWDTLGVGSNELLFDDSRFAFEATTKAVDRNVDYEVTNAEVAGRPVVGGPVKSRATPNIWNYQFAAKLRLTDQLDCMARTNDPYQIEEDLNQEWQGRFSLTRTSAAGRGFNGTCAYKFQVRDGHYVRAIAGANLLYLRYRTDNLSYGAFIPPSTYVDFPTRLDVSSDDPGFGWRVGASYEIPQYAIRASLIYDSAIDVDLAGGTEVTGVTSFDSFASVTMPQSLEFNLQTGIAPDWLATFGVKWVDWSKLQDLTVQNPAGSTVVNRFLGYDDGWTVRAGLAHKVNDWLKLGSTIQWDRGIGQSYSDTYSFGVGTAIQLDKHAELTIGTAATYKTSGTGDLTNLASTSGATTQYKYGDSWNYTLQTKLKFSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGV6</accession>
    <name>A0A0M7AGV6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">LysM domain/BON superfamily protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_03830</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74338.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673147.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03830"/>
    <dbReference type="EnsemblBacteria" id="CTQ74338">
        <property type="protein sequence ID" value="CTQ74338"/>
        <property type="gene ID" value="LAX5112_03830"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00118">
        <property type="entry name" value="LysM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.350.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013783">
        <property type="entry name" value="Ig-like_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018392">
        <property type="entry name" value="LysM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036779">
        <property type="entry name" value="LysM_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01476">
        <property type="entry name" value="LysM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00257">
        <property type="entry name" value="LysM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54106">
        <property type="entry name" value="SSF54106"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51782">
        <property type="entry name" value="LYSM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="7"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="domain" description="LysM" evidence="3">
        <location>
            <begin position="480"/>
            <end position="529"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="32"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="221"/>
            <end position="367"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="41"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="232"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="262"/>
            <end position="367"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51782"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ74338.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="547" mass="55961" checksum="57FA829DC864A1CD" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AH63</accession>
    <name>A0A0M7AH63_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03649</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73762.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672992.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03649"/>
    <dbReference type="EnsemblBacteria" id="CTQ73762">
        <property type="protein sequence ID" value="CTQ73762"/>
        <property type="gene ID" value="LAX5112_03649"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ73762.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="264" mass="28300" checksum="8DBD43CFD639FF55" modified="2015-12-09" version="1">MSGFSATWLALREPLDLAARNSDVEAAFFGALPAETVKVLDLASGAGSTVAALAGTKPDIHWILSDYDADLLSLAASRDYATKPASLQTREIDLAANLKELPFHEVVAITTSAFLDLVSQEFLMQLVEAIVSSGKPFLASLTYDGRTGFAPAEPLDQDLCDAMNRDQQTDKGFGPALGPKAAEQAIALFRAKGYRVVSGKSDWIIGPQHEDFLAEFLPGWVGAGVKQGVEKSKADRWLQTRRSQISDGAFTMTVGHLDFVALPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHT8</accession>
    <name>A0A0M7AHT8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Acetyl-coenzyme A synthetase</fullName>
            <ecNumber evidence="4">6.2.1.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">acsA_4</name>
        <name evidence="4" type="ORF">LAX5112_03944</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="6.2.1.1" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74705.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03944"/>
    <dbReference type="EnsemblBacteria" id="CTQ74705">
        <property type="protein sequence ID" value="CTQ74705"/>
        <property type="gene ID" value="LAX5112_03944"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003987">
        <property type="term" value="F:acetate-CoA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12780">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025110">
        <property type="entry name" value="AMP-bd_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045851">
        <property type="entry name" value="AMP-bd_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020845">
        <property type="entry name" value="AMP-binding_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000873">
        <property type="entry name" value="AMP-dep_Synth/Lig"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042099">
        <property type="entry name" value="ANL_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00501">
        <property type="entry name" value="AMP-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13193">
        <property type="entry name" value="AMP-binding_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00455">
        <property type="entry name" value="AMP_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0007">Acetylation</keyword>
    <keyword evidence="4" id="KW-0436">Ligase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AMP-binding" evidence="2">
        <location>
            <begin position="33"/>
            <end position="441"/>
        </location>
    </feature>
    <feature type="domain" description="AMP-binding_C" evidence="3">
        <location>
            <begin position="451"/>
            <end position="529"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022990"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF13193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ74705.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="548" mass="60365" checksum="F5166EE08E6C4275" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AI67</accession>
    <name>A0A0M7AI67_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Carboxylate/amino acid/amine transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03995</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74835.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673287.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74835">
        <property type="protein sequence ID" value="CTQ74835"/>
        <property type="gene ID" value="LAX5112_03995"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000620">
        <property type="entry name" value="EamA_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00892">
        <property type="entry name" value="EamA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="31"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="64"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="96"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="119"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="156"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="188"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="221"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="250"/>
            <end position="270"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="277"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="domain" description="EamA" evidence="2">
        <location>
            <begin position="7"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="domain" description="EamA" evidence="2">
        <location>
            <begin position="157"/>
            <end position="295"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ74835.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="297" mass="30917" checksum="294D299A4015BECB" modified="2015-12-09" version="1">MFVYEAAALGAAALWALTGLISAGPAQHLGAIAFNCTRMVLVALMLIAWVAFTTGWGSISADHIVPLMLSGVIGIFMGDTALFLTLNRMGPRRTAMLFSLNAPMSAILGWLLLNEDLTVTQILGILVTFSGVLLAIRFGKRKSQLHQWESIRGPLWAGILLGLAAALSQSIGSLIARPVMETGADPVAASSLRVGMAALCLLALTRLPVSWVKPAGQFTPSLVGLIALSGVLGMGVGMTLILFALSGGEVGIIATLSATTPALMLPMLWWRTKEIPALGAWAGASLVVVGSALLFAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIC2</accession>
    <name>A0A0M7AIC2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">L-arabinose 1-dehydrogenase</fullName>
            <ecNumber evidence="3">1.1.1.46</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">araA</name>
        <name evidence="3" type="ORF">LAX5112_03850</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.1.1.46" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74397.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03850"/>
    <dbReference type="EnsemblBacteria" id="CTQ74397">
        <property type="protein sequence ID" value="CTQ74397"/>
        <property type="gene ID" value="LAX5112_03850"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050022">
        <property type="term" value="F:L-arabinose 1-dehydrogenase (NAD+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004104">
        <property type="entry name" value="Gfo/Idh/MocA-like_OxRdtase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000683">
        <property type="entry name" value="Gfo/Idh/MocA-like_OxRdtase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01408">
        <property type="entry name" value="GFO_IDH_MocA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02894">
        <property type="entry name" value="GFO_IDH_MocA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GFO_IDH_MocA" evidence="1">
        <location>
            <begin position="67"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="domain" description="GFO_IDH_MocA_C" evidence="2">
        <location>
            <begin position="195"/>
            <end position="418"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01408"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02894"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ74397.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="438" mass="47950" checksum="FD9930D8B0768E01" modified="2015-12-09" version="1">MPFEYWLFWLSNSEHSHDLLDCVSDADDGNLVVFVRLAAARLFGVYWCWQNNQEEAPETPTMSNELGIGILGCGKTSRIYFNLIPKFNGLQLRACADLNREVALVRADEFDIRAETVHDLFQAEDISVIVNLSAPDAHAMMSREILNNGKHVYSEKPFARTSAEGAAVRQHAEKLGLFVGCAPDTFMGGAPQTARKAISEGLIGEVNGATLHAMNHGMEAWHPNPDLFYKSGIGPMADFGPYFICSVLNLLGPVEQVSAMSSTPVKTRTIGQGPRKGEVFDVETPTTIHATLSVMDGPLVAFSASWDVHAHAHSAMEIYGSEGTLFLPDPVFFGGDVIRVLKDGTREVLNQENHPFGLPNFKIHGRERANYRSAGLADMANAVRLGHDFRCSMERALHTVDVIEAIQTAAATGQHVKISEMPTRPAPLSPDQAKALLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AII3</accession>
    <name>A0A0M7AII3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Putative inner membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">LAX5112_03586</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the UPF0394 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73583.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672944.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03586"/>
    <dbReference type="EnsemblBacteria" id="CTQ73583">
        <property type="protein sequence ID" value="CTQ73583"/>
        <property type="gene ID" value="LAX5112_03586"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007272">
        <property type="entry name" value="Sulf_transp"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04143">
        <property type="entry name" value="Sulf_transp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="37"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="72"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="103"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="143"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="184"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="223"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="292"/>
            <end position="310"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="322"/>
            <end position="340"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="360"/>
            <end position="378"/>
        </location>
    </feature>
    <feature type="domain" description="Sulf_transp" evidence="8">
        <location>
            <begin position="51"/>
            <end position="372"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009590"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF04143"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ73583.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="383" mass="40097" checksum="47713422B280B689" modified="2015-12-09" version="1">MAVSLKSPQTALAVVAFGIIGLISIGAYAAAGPRQGMAVLIGGLAGISLYHASFGFTAAWRRIVTEKRGGGLRAQFVLILLTSAVSFPLIAWGDTLGWPAGGFVFPFGIAAAIGAFMFGAGMQLGGGCGSGTLFTAGGGSTRMMITLAAFILGSVFATAHLHLWGQLPKLQPVSLIREFGPQGAFLLTALVLGFIALLTVWLERRAHGDIAPARKTESVLQGPWSPMFGAVMLAVVGIATFIVVGRPWGITSAFALWGAKAFHFVGIPVETWPYWTWQKGALENSVLRDTTSVMNFGIIFGAMAAAALAGKYAPLWKLTRRDVLTAIAGGLLMGYGARLAYGCNIGAYLGGLVSGSLHGWLWLLFGFLGSMVGVRLRLKLGMG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJG2</accession>
    <name>A0A0M7AJG2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Transporter, divalent anion:Na+ symporter (DASS) family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">LAX5112_04160</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75248.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673411.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75248">
        <property type="protein sequence ID" value="CTQ75248"/>
        <property type="gene ID" value="LAX5112_04160"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008324">
        <property type="term" value="F:cation transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006813">
        <property type="term" value="P:potassium ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1450">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004680">
        <property type="entry name" value="Cit_transptr-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006037">
        <property type="entry name" value="RCK_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036721">
        <property type="entry name" value="RCK_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03600">
        <property type="entry name" value="CitMHS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF116726">
        <property type="entry name" value="SSF116726"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51202">
        <property type="entry name" value="RCK_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="6"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="51"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="90"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="139"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="180"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="401"/>
            <end position="433"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="445"/>
            <end position="464"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="476"/>
            <end position="497"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="531"/>
            <end position="549"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="569"/>
            <end position="589"/>
        </location>
    </feature>
    <feature type="domain" description="RCK C-terminal" evidence="7">
        <location>
            <begin position="299"/>
            <end position="383"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51202"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ75248.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="591" mass="62314" checksum="41D87F4C89EBFCCC" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJU3</accession>
    <name>A0A0M7AJU3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Rhamnosyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04208</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75388.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673449.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000021.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04208"/>
    <dbReference type="EnsemblBacteria" id="CTQ75388">
        <property type="protein sequence ID" value="CTQ75388"/>
        <property type="gene ID" value="LAX5112_04208"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001173">
        <property type="entry name" value="Glyco_trans_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006446">
        <property type="entry name" value="RhaTrfase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00535">
        <property type="entry name" value="Glycos_transf_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01556">
        <property type="entry name" value="rhamnosyltran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glyco_trans_2-like" evidence="1">
        <location>
            <begin position="18"/>
            <end position="112"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00535"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75388.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="304" mass="34049" checksum="B0F235EB933A173D" modified="2015-12-09" version="1">MTETSPVPGALSRVCGVVVTYQPDLGPLTAMLERIAPQVDDLVIVDNGSHTDLTALATNFNATLKLLGDNFGIAHAQNAGIAMARERGADSVLLLDQDSLPAPDMVAKLVAAELKLRTEGKTVAAVGANYIDPRKGDTGCFPYRKGLRLKHRVNTGKETIVETDYLIASGSLTPMTVFDRVGDMVDELFIDYVDIEWGLRAREMGYISYGVFDAHMEHALGDDHIQFLWRRVPVHSAVRHYYQQRNAVWLIRQSWLPHIWTPILLFRMAYRLVFFTLAAPKRWTHSRMMLSGIWDGVRGRMGRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AK75</accession>
    <name>A0A0M7AK75_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 7">Flagellar basal-body rod protein FlgG</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6 7">Distal rod protein</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="10" type="primary">flgG_3</name>
        <name evidence="10" type="ORF">LAX5112_04098</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="5 7">The basal body constitutes a major portion of the flagellar organelle and consists of four rings (L,P,S, and M) mounted on a central rod. The rod consists of about 26 subunits of FlgG in the distal portion, and FlgB, FlgC and FlgF are thought to build up the proximal portion of the rod with about 6 subunits each.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 7">Bacterial flagellum basal body</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the flagella basal body rod proteins family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ75047.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673361.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04098"/>
    <dbReference type="EnsemblBacteria" id="CTQ75047">
        <property type="protein sequence ID" value="CTQ75047"/>
        <property type="gene ID" value="LAX5112_04098"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009426">
        <property type="term" value="C:bacterial-type flagellum basal body, distal rod"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071973">
        <property type="term" value="P:bacterial-type flagellum-dependent cell motility"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001444">
        <property type="entry name" value="Flag_bb_rod_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019776">
        <property type="entry name" value="Flagellar_basal_body_rod_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020013">
        <property type="entry name" value="Flagellar_FlgE/F/G"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010930">
        <property type="entry name" value="Flg_bb/hook_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037925">
        <property type="entry name" value="FlgE/F/G-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012834">
        <property type="entry name" value="FlgG_G_neg"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00460">
        <property type="entry name" value="Flg_bb_rod"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06429">
        <property type="entry name" value="Flg_bbr_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF117143">
        <property type="entry name" value="SSF117143"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03506">
        <property type="entry name" value="FlgEFG_subfam"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02488">
        <property type="entry name" value="flgG_G_neg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00588">
        <property type="entry name" value="FLAGELLA_BB_ROD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7" id="KW-0975">Bacterial flagellum</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Flg_bb_rod" evidence="8">
        <location>
            <begin position="6"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="domain" description="Flg_bbr_C" evidence="9">
        <location>
            <begin position="183"/>
            <end position="259"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009677"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00017948"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023143"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00025933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00032912"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU362116"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00460"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF06429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ75047.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="262" mass="27836" checksum="A92DFA8C86199E14" modified="2015-12-09" version="1">MKALAIAATGMSAQQLNVEVVANNIANMNTTSFKRAQAEFSDLLYQAERLQGVPNRGGEDPVPEGAQLGLGVKTAGIRKLHMQGPLTNTGNQFDIALEGRGWFEITGPDDETLYTRAGSFNKNADGRLVTIDGYTVEPAIIVPEETIEVAINETGQVYAKIDGEIQPREIGQLSLANFANDVGLEPVGGNLFRETPASGAPVAGVPGDPGFGVVRQGYLESSNVDPVKEITALISAQRGYEMNSKVMKAADEMANTVTNGIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AL32</accession>
    <name>A0A0M7AL32_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Putative PEP-CTERM system TPR-repeat lipoprotein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_04131</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75162.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673390.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04131"/>
    <dbReference type="EnsemblBacteria" id="CTQ75162">
        <property type="protein sequence ID" value="CTQ75162"/>
        <property type="gene ID" value="LAX5112_04131"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008476">
        <property type="term" value="F:protein-tyrosine sulfotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006478">
        <property type="term" value="P:peptidyl-tyrosine sulfation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_repeat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026634">
        <property type="entry name" value="TPST"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12788">
        <property type="entry name" value="PTHR12788"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00028">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="SSF48452"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="4" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="coiled-coil region" evidence="3">
        <location>
            <begin position="135"/>
            <end position="162"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ75162.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="514" mass="58236" checksum="02912D65EC4EFCEF" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALB9</accession>
    <name>A0A0M7ALB9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Fumarylpyruvate hydrolase</fullName>
            <ecNumber evidence="2">3.7.1.5</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">nagK_2</name>
        <name evidence="2" type="ORF">LAX5112_04158</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.7.1.5" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75242.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673409.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04158"/>
    <dbReference type="EnsemblBacteria" id="CTQ75242">
        <property type="protein sequence ID" value="CTQ75242"/>
        <property type="gene ID" value="LAX5112_04158"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047621">
        <property type="term" value="F:acylpyruvate hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.850.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011234">
        <property type="entry name" value="Fumarylacetoacetase-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036663">
        <property type="entry name" value="Fumarylacetoacetase_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01557">
        <property type="entry name" value="FAA_hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56529">
        <property type="entry name" value="SSF56529"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FAA_hydrolase" evidence="1">
        <location>
            <begin position="27"/>
            <end position="227"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01557"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75242.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="228" mass="24817" checksum="34B5DB2C3E3FEF2F" modified="2015-12-09" version="1">MQTFVFAPPAVPAVPVDGTSDLFPVRRVYCIGRNYAAHAVEMGHDPDKEPPFFFQKNPDNLNTSSTFPYPPKSDDVHHEIELAVALKSGGRNLPVNKALDHVFGYAVSLDMTRRDLQGNAKKMGRPWEIGKAFEKSAPITPIVPAADCGHLSEGKIQLTVNGDLRQEGDLNQMIWKVPEMISYLSEYFELAPGDVIQTGTPAGVGPVVRGDKLVGSVEGLPPLEVTVI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALJ5</accession>
    <name>A0A0M7ALJ5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Sodium ATPase proteolipid component</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ntpK</name>
        <name evidence="7" type="ORF">LAX5112_04429</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ75995.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008195907.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000024.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04429"/>
    <dbReference type="EnsemblBacteria" id="CTQ75995">
        <property type="protein sequence ID" value="CTQ75995"/>
        <property type="gene ID" value="LAX5112_04429"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033177">
        <property type="term" value="C:proton-transporting two-sector ATPase complex, proton-transporting domain"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015078">
        <property type="term" value="F:proton transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.610">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002379">
        <property type="entry name" value="ATPase_proteolipid_c-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035921">
        <property type="entry name" value="F/V-ATP_Csub_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00137">
        <property type="entry name" value="ATP-synt_C"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81333">
        <property type="entry name" value="SSF81333"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="49"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="77"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="118"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="domain" description="ATP-synt_C" evidence="6">
        <location>
            <begin position="12"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="domain" description="ATP-synt_C" evidence="6">
        <location>
            <begin position="84"/>
            <end position="143"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00137"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ75995.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="149" mass="15073" checksum="9558D123D9B9CA99" modified="2015-12-09" version="1">MNEFVVALGWFGLYAPVALGAIGSAWGCALGGSAAIGAMLDSDGGYGRFIGVSLMPSSQVIYGIVIMFSLQQTTVDAANGAAMFGIGVLSGFTMLFTGIRQGEVLASAIHASKAKPEIFGISLAPAAVLEGFSVFALVFALVLAGTMPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AM57</accession>
    <name>A0A0M7AM57_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">CCA-adding enzyme</fullName>
            <ecNumber evidence="6">2.7.7.72</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">cca</name>
        <name evidence="6" type="ORF">LAX5112_04181</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="3">Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.72" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75310.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673424.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04181"/>
    <dbReference type="EnsemblBacteria" id="CTQ75310">
        <property type="protein sequence ID" value="CTQ75310"/>
        <property type="gene ID" value="LAX5112_04181"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052929">
        <property type="term" value="F:ATP:3'-cytidine-cytidine-tRNA adenylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052928">
        <property type="term" value="F:CTP:3'-cytidine-tRNA cytidylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052927">
        <property type="term" value="F:CTP:tRNA cytidylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016437">
        <property type="term" value="F:tRNA cytidylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031123">
        <property type="term" value="P:RNA 3'-end processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="CDD" id="cd05398">
        <property type="entry name" value="NT_ClassII-CCAase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.460.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043519">
        <property type="entry name" value="NT_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002646">
        <property type="entry name" value="PolA_pol_head_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032828">
        <property type="entry name" value="PolyA_RNA-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01743">
        <property type="entry name" value="PolyA_pol"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12627">
        <property type="entry name" value="PolyA_pol_RNAbd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81301">
        <property type="entry name" value="SSF81301"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="1 3 6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PolyA_pol" evidence="4">
        <location>
            <begin position="34"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="domain" description="PolyA_pol_RNAbd" evidence="5">
        <location>
            <begin position="194"/>
            <end position="238"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU003953"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF01743"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF12627"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ75310.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="415" mass="46432" checksum="C3F673C42CBEA6B0" modified="2015-12-09" version="1">MKDRAEDILTAANWLRSPGIQAVFSALNRCNDSARVVGGAIRNTLLGHPVPDIDIATTATPQDVMRRAADAGLKPIGTGIDHGTITVISDGFPYEVTTLREDVETYGRQAKVVFGRDWKKDALRRDFTMNALYVDSLGKLHDPLDGLEDCLARRVRFIGDPDMRLREDYLRILRFFRIYAAYGDGDMDAEGLGACLRQRDGLRHLSAERIGHEMRRLVSAPKAAIAVRMMNDCGLWEIATGGLAKIEDFEALRQLDALAPETQDPEVGLTVLSGFVREDVDRVADRLRLSNAERKRMQICWEAYKTFRQSDQMPDLKTLLYTHGRQGAIDGLLAYWAAFEAQKRLGDQPDFEDALLKLKSVEVPVFPLKGADMIALGYRPGPQVGKVLKTLEKIWCENGFALSKQDLLARLENRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANC7</accession>
    <name>A0A0M7ANC7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">HTH-type transcriptional repressor CytR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">cytR_3</name>
        <name evidence="6" type="ORF">LAX5112_04585</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000026">
        <property type="protein sequence ID" value="CTQ76409.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04585"/>
    <dbReference type="EnsemblBacteria" id="CTQ76409">
        <property type="protein sequence ID" value="CTQ76409"/>
        <property type="gene ID" value="LAX5112_04585"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01392">
        <property type="entry name" value="HTH_LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000843">
        <property type="entry name" value="HTH_LacI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046335">
        <property type="entry name" value="LacI/GalR-like_sensor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00356">
        <property type="entry name" value="LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13377">
        <property type="entry name" value="Peripla_BP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00354">
        <property type="entry name" value="HTH_LACI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50932">
        <property type="entry name" value="HTH_LACI_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="5">
        <location>
            <begin position="4"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="domain" description="HTH lacI-type" evidence="4">
        <location>
            <begin position="7"/>
            <end position="61"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ76409.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="343" mass="38239" checksum="3C882F3394D39F93" modified="2015-12-09" version="1">MVERKLKNMEEFAAVSGISRPTLSKYFNNPESVRQTTRLRIEDALQKYDYRPNIFAMNQNRKLTKNVGIVVPFLADPFFTEIARKMEQRCLEAGFHPTLYSAHGQQQLENEILDSLRSLKPAGVLLAPLGRASDKLSVEKFCQDVPTVLFDSNIAGIGEAFVGSDNFSFVSQTVDYLTRTGEPPSFFEMRTPANPNANKRRAAYEQLMAERNLEPRILKIEGEGWAFEQIGRDGALRILETGGFPTNTVLCSNDRLAIGLLSACYEKGLRVGRGAGCAMRVASHDDHPFSKFTCPSLTTAAHDYDSVSDHAFKTLNNLIEAGGRFARREETVFSARLVLRSSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANT2</accession>
    <name>A0A0M7ANT2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Stage 0 sporulation protein KD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">oppD_3</name>
        <name evidence="8" type="ORF">LAX5112_04554</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000026">
        <property type="protein sequence ID" value="CTQ76317.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673749.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000026.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04554"/>
    <dbReference type="EnsemblBacteria" id="CTQ76317">
        <property type="protein sequence ID" value="CTQ76317"/>
        <property type="gene ID" value="LAX5112_04554"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015833">
        <property type="term" value="P:peptide transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013563">
        <property type="entry name" value="Oligopep_ABC_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08352">
        <property type="entry name" value="oligo_HPY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01727">
        <property type="entry name" value="oligo_HPY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ABC transporter" evidence="7">
        <location>
            <begin position="2"/>
            <end position="260"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="38"/>
            <end position="45"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ76317.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="335" mass="36444" checksum="A6BCDC61983AB597" modified="2015-12-09" version="1">MLNVENLSISFGTDEGLITPVQGVSFSVEAGKTLGLVGESGSGKSITTKALMRLLPGNAHLSQETRITYRSKNGKEIEVEKIKPRSRELRALRGGEIGMIFQEPMASFSPVYSVGNQMIEAIRLHRGCGKREARQLAVEMLQKVGISNAAVRIDQYPHEMSGGMRQRAMIALALSAGPALLIADEPTTALDVTIQAQVLDLMRELQRDLSMAMIFITHDLGVIAQIADEVAVMYLGTIVERGATRDVIRDPKHPYTQGLLKAIPSLETLHDRLSPVPGDIPSPTERPSGCPFHTRCPDAINNICNVRTPVELTPAPGRAVRCWLHDEPKSGRSAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQZ9</accession>
    <name>A0A0M7AQZ9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">LysE type translocator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">LAX5112_04794</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000031">
        <property type="protein sequence ID" value="CTQ77077.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673956.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000031.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77077">
        <property type="protein sequence ID" value="CTQ77077"/>
        <property type="gene ID" value="LAX5112_04794"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006865">
        <property type="term" value="P:amino acid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001123">
        <property type="entry name" value="LeuE-type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30086">
        <property type="entry name" value="PTHR30086"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01810">
        <property type="entry name" value="LysE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="6"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="42"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="68"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="119"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="142"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="179"/>
            <end position="197"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ77077.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="198" mass="20876" checksum="8AC87DCBA36499B0" modified="2015-12-09" version="1">MDTATLMAFAVFVIIMTGTPGPGNLAFLAIGASSGYRTAFPVIIASQIGSLPLNLAVAYGLGHIMAQGGIIVSMFKALSLTYMAFLAWRIVSLTIRPKGEATLLTFWEGLLIHPLSPKTWAMSLVAFSTFFAGNGLDLHVNAAILATGFLVGGMVFHSLWALVGVSILALIGEGRLMRSITVAMALTMLAATVWALML</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARG8</accession>
    <name>A0A0M7ARG8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_05027</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000043">
        <property type="protein sequence ID" value="CTQ77718.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77718">
        <property type="protein sequence ID" value="CTQ77718"/>
        <property type="gene ID" value="LAX5112_05027"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ77718.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="86" mass="9452" checksum="19575DB10F327A32" modified="2015-12-09" version="1">MNPDCFSGFPVEVGEPFKVAFRVSGRDPCCGRDALQHTRAASCQALGGFSKRRILQIVRIFLMPFNAGLVAIDPELEIVLIARCDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARK7</accession>
    <name>A0A0M7ARK7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Arylsulfatase</fullName>
            <ecNumber evidence="3">3.1.6.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">atsA_7</name>
        <name evidence="3" type="ORF">LAX5112_05039</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="PTM">
        <text evidence="1">The conversion to 3-oxoalanine (also known as C-formylglycine, FGly), of a serine or cysteine residue in prokaryotes and of a cysteine residue in eukaryotes, is critical for catalytic activity.</text>
    </comment>
    <dbReference type="EC" id="3.1.6.1" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000046">
        <property type="protein sequence ID" value="CTQ77748.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_05039"/>
    <dbReference type="EnsemblBacteria" id="CTQ77748">
        <property type="protein sequence ID" value="CTQ77748"/>
        <property type="gene ID" value="LAX5112_05039"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004065">
        <property type="term" value="F:arylsulfatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017850">
        <property type="entry name" value="Alkaline_phosphatase_core_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000917">
        <property type="entry name" value="Sulfatase_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00884">
        <property type="entry name" value="Sulfatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53649">
        <property type="entry name" value="SSF53649"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Sulfatase" evidence="2">
        <location>
            <begin position="6"/>
            <end position="319"/>
        </location>
    </feature>
    <feature type="modified residue" description="3-oxoalanine (Cys)" evidence="1">
        <location>
            <position position="30"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRSR" id="PIRSR600917-51"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ77748.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="479" mass="54303" checksum="322048C09445C611" modified="2015-12-09" version="1">MGLMGYRTPNIDRVANEGMIFTDYYGEQSCTAGRSSYIMGQSVFRTGLSKVGLPGADLGMREEDPTIAGLLKAQGYVTGQFGKNHLGDKDEHLPTNHGFDEFFGNLYHLNAEEEPENEDYPGDMVLADGRTFREAFGPRGVIKSSADGTIEDTGPLTKKRQETVDEETIAGAIDFIKRANEQGQPFYVWWNGTRMHFRTHVKEEMRDQANDIAGGHVDEYTAGMIEHDLHVGQLLDLIDELGIADNTIVHYSTDNGPHYNTWPDAASTPFFGEKNTNWEGGWRVPSMVRWPGKIEAGSVSNQIMHHMDWLPTYLAAAGVPDIKEQLKEGGVQAIGREYKVHLDGYNFLPHLTGEDEKGPRAEIFYFSDDGDLTALRWNDWKLMFMEQKEYKTLRAWIEPFTPLRLPLIFNLRRDPYERSYQTSNTYYDWLIDRAYMLVPAQQYVGNFLATFQEFPPRQKAASFSLDQVMDKLSTPGGAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASB0</accession>
    <name>A0A0M7ASB0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_04877</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <dbReference type="EMBL" id="CXWD01000033">
        <property type="protein sequence ID" value="CTQ77332.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674024.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000033.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04877"/>
    <dbReference type="EnsemblBacteria" id="CTQ77332">
        <property type="protein sequence ID" value="CTQ77332"/>
        <property type="gene ID" value="LAX5112_04877"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031419">
        <property type="term" value="F:cobalamin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.30.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006158">
        <property type="entry name" value="Cobalamin-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036724">
        <property type="entry name" value="Cobalamin-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006638">
        <property type="entry name" value="Elp3/MiaB/NifB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034466">
        <property type="entry name" value="Methyltransferase_Class_B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007197">
        <property type="entry name" value="rSAM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023404">
        <property type="entry name" value="rSAM_horseshoe"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02310">
        <property type="entry name" value="B12-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04055">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDG01123">
        <property type="entry name" value="methyltransferase_(Class_B)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00729">
        <property type="entry name" value="Elp3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52242">
        <property type="entry name" value="SSF52242"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51332">
        <property type="entry name" value="B12_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51918">
        <property type="entry name" value="RADICAL_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="B12-binding" evidence="2">
        <location>
            <begin position="9"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="domain" description="Radical SAM core" evidence="3">
        <location>
            <begin position="190"/>
            <end position="417"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51332"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ77332.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="551" mass="63143" checksum="24F62D2F86D26934" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASS5</accession>
    <name>A0A0M7ASS5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04719</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000029">
        <property type="protein sequence ID" value="CTQ76833.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008195981.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000029.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76833">
        <property type="protein sequence ID" value="CTQ76833"/>
        <property type="gene ID" value="LAX5112_04719"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="47"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="112"/>
            <end position="135"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76833.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="161" mass="18385" checksum="3F49AB10DD1A0E66" modified="2015-12-09" version="1">MVFHVIGFWLLMLSIPLWGYRFFLTSKLAYREKKIFRRLLDHADERAYFFALKLFGFLVALSAAVLAMVAGLGYIKHGSTQIGSYREVIRSRIYSGVDPVDQALDTFHYDQWLPIAILTTCALLSISFTLVATALRDISLLNRLRKRLKKVPQAMKTAPKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AT33</accession>
    <name>A0A0M7AT33_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04960</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000037">
        <property type="protein sequence ID" value="CTQ77576.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674099.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000037.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77576">
        <property type="protein sequence ID" value="CTQ77576"/>
        <property type="gene ID" value="LAX5112_04960"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ77576.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="151" mass="16730" checksum="7DF600F91BCC5E53" modified="2015-12-09" version="1">MKPHSNRIETVVEKAFEPGHPFQTGITLLAIDVSYGATLDNPELKKPFVETLVNNAFKPVGRNQLARHTERLAWEIEKEINADHSGPGQLGDVIDDQVTSRTRRLTDAIKTSVNHETINDIEGTIAAVREAVQTVANWRPDAAVLSRVSRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ATX9</accession>
    <name>A0A0M7ATX9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative hydrolase YxeP</fullName>
            <ecNumber evidence="3">3.-.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yxeP_3</name>
        <name evidence="3" type="ORF">LAX5112_05024</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.-.-.-" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000042">
        <property type="protein sequence ID" value="CTQ77710.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674147.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000042.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_05024"/>
    <dbReference type="EnsemblBacteria" id="CTQ77710">
        <property type="protein sequence ID" value="CTQ77710"/>
        <property type="gene ID" value="LAX5112_05024"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017439">
        <property type="entry name" value="Amidohydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036264">
        <property type="entry name" value="Bact_exopeptidase_dim_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002933">
        <property type="entry name" value="Peptidase_M20"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011650">
        <property type="entry name" value="Peptidase_M20_dimer"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11014">
        <property type="entry name" value="PTHR11014"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07687">
        <property type="entry name" value="M20_dimer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01546">
        <property type="entry name" value="Peptidase_M20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005962">
        <property type="entry name" value="Pept_M20D_amidohydro"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55031">
        <property type="entry name" value="SSF55031"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01891">
        <property type="entry name" value="amidohydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="M20_dimer" evidence="2">
        <location>
            <begin position="183"/>
            <end position="281"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07687"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ77710.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="389" mass="42404" checksum="43DD43AB9788A779" modified="2015-12-09" version="1">MTKQTTNFDADLVATRRHLHSIPEIGLSEFKTSDYVAGELTAMGYEVTRGLGKTGVVATLRNGTSSRSIGIRADFDALPIKEETGADYASTHPGVMHACGHDGHTAMLLGAAKRLAERKQFDGTVHLIFQPAEENFGGAKLMIEDGLFERFPCDAVFGLHNDPNLPFGEFHFIDGPMMAAADECKITVIGKGGHGAEPQSTPDPIVCGASIIMALQSIVARNIHPMRQAVITVGAFNSGIASNVIPERAEMSLTVRAFDPDVRDELETRIRKVAEGQAASYDLKVAVDYERGYPPMVNPRQETDYVRSIARNFAGDDQVKSMPHPIMGSEDFAYFLEERPGCFFLLGTAKTDNDPPLHHPKYDFNDDALPLGTAFWVDLAEDFLSGLEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AUV2</accession>
    <name>A0A0M7AUV2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Mrr_cat domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04953</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000037">
        <property type="protein sequence ID" value="CTQ77563.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77563">
        <property type="protein sequence ID" value="CTQ77563"/>
        <property type="gene ID" value="LAX5112_04953"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004519">
        <property type="term" value="F:endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009307">
        <property type="term" value="P:DNA restriction-modification system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011335">
        <property type="entry name" value="Restrct_endonuc-II-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007560">
        <property type="entry name" value="Restrct_endonuc_IV_Mrr"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04471">
        <property type="entry name" value="Mrr_cat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52980">
        <property type="entry name" value="SSF52980"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Mrr_cat" evidence="1">
        <location>
            <begin position="7"/>
            <end position="125"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77563.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="252" mass="28341" checksum="AD1DA733D6E7D953" modified="2015-12-09" version="1">MSPDWKDWERYERLVARLMADQLSPEFCVTPNASILGAITDIKRQIDVLIDYRHDTDNTRRIIVDAKKRKRKIDVKDVEAFRGMMEDVGASYGYLVCPHGHTKAAEKRAQNAVSICLLPLDRLEDFNPLNWPKCSRSGCDAGHVFWDGYPEVSLGLEPLGGSSLTTRRAYIHSVGKCDRCGTFHVLCETCGQTLVVPEDDETDEGHQCECKMPWFWLASIECDQAGAQSAELHLVMGSFGIRTVSRRSISAM</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AV16</accession>
    <name>A0A0M7AV16_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04909</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000034">
        <property type="protein sequence ID" value="CTQ77434.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674052.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000034.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04909"/>
    <dbReference type="EnsemblBacteria" id="CTQ77434">
        <property type="protein sequence ID" value="CTQ77434"/>
        <property type="gene ID" value="LAX5112_04909"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021874">
        <property type="entry name" value="Phage_Mu_Gp27"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11985">
        <property type="entry name" value="DUF3486"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ77434.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="197" mass="21874" checksum="C0C0B4C7A0B7B7F3" modified="2015-12-09" version="1">MAPRRGRGRLSSIEKLPPECDHIIADAARDLRGRDKTQTEIYEDFYRDLEDLQKEYRGELDFAIPSFSSFNRYAIKQAHLTRRLEDTRQIAASIAESFDAEASDDLTLIAAEALKTLIFELLTDAGESGLAPKEAMSLANALHKATAAQGISSKRRSQVEADFAKKTDAALEKVSKAKGLSEDAVAQLRREFLGLRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZLK5</accession>
    <name>A0A0M6ZLK5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative domain 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00019</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63649.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040452105.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00019"/>
    <dbReference type="EnsemblBacteria" id="CTQ63649">
        <property type="protein sequence ID" value="CTQ63649"/>
        <property type="gene ID" value="LAX5112_00019"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029069">
        <property type="entry name" value="HotDog_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003736">
        <property type="entry name" value="PAAI_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006683">
        <property type="entry name" value="Thioestr_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03061">
        <property type="entry name" value="4HBT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54637">
        <property type="entry name" value="SSF54637"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00369">
        <property type="entry name" value="unchar_dom_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="4HBT" evidence="1">
        <location>
            <begin position="52"/>
            <end position="123"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03061"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ63649.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="141" mass="15136" checksum="A8262B790368302B" modified="2015-12-09" version="1">MQPIMNADEIMGMLDEVFPQIHADGRVYEIENVGPGEAVLRLSANERHLRPGGTVSGPTMMAMADFAAYVVILAHIGPQALAVTTNLNINFLRKPEPGDLLATCRLLKLGKRLAVVDCAIAGEGQDDMVAHATATYSIPPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZN03</accession>
    <name>A0A0M6ZN03_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Flagellum-specific ATP synthase</fullName>
            <ecNumber evidence="5">3.6.3.14</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">fliI</name>
        <name evidence="5" type="ORF">LAX5112_00192</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EC" id="3.6.3.14" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64138.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670195.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00192"/>
    <dbReference type="EnsemblBacteria" id="CTQ64138">
        <property type="protein sequence ID" value="CTQ64138"/>
        <property type="gene ID" value="LAX5112_00192"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030257">
        <property type="term" value="C:type III protein secretion system complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046933">
        <property type="term" value="F:proton-transporting ATP synthase activity, rotational mechanism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046961">
        <property type="term" value="F:proton-transporting ATPase activity, rotational mechanism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030254">
        <property type="term" value="P:protein secretion by the type III secretion system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000194">
        <property type="entry name" value="ATPase_F1/V1/A1_a/bsu_nucl-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005714">
        <property type="entry name" value="ATPase_T3SS_FliI/YscN"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040627">
        <property type="entry name" value="T3SS_ATPase_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00006">
        <property type="entry name" value="ATP-synt_ab"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18269">
        <property type="entry name" value="T3SS_ATPase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01026">
        <property type="entry name" value="fliI_yscN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0653">Protein transport</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="domain" description="AAA" evidence="4">
        <location>
            <begin position="167"/>
            <end position="349"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ64138.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="448" mass="47921" checksum="02C2FCDDA0D7BC23" modified="2015-12-09" version="1">MPSSQHLNSLDQITASLAALDTEIGRVKLSGQVTQVSAEAIRVSGLSRVVCLGDLIQFEGRSGVRQGEIIRLEQKDVVVKPLERVSDIGIGSVASLMGGLAIHPDLSWRGRIINALGEPIDGQGQLRHGVEAFLLDRAPPPAMNREKVTEGVRTGVRVIDLFTPLCVGQRIGVFAGSGVGKSTLLGMLAGFGEFDTVVVGLVGERGREVREFIDDILGETIANSVVVASTGDESAMQRRLAPKTAMSVAEYFRAQGHKVLLILDSATRFAHAARDVALAAGEPPVARGYPPSVFADLARLIERAGPGASGEGSITGIFSVLVDGDDHNDPVSDAIRGLLDGHIVLDRKTAESGRYPPVEILKSTSRLASRAWTEDQQELIHRIKGLISHYEDTKDLRMMGGFQITGDEHLEKACRLVPRIYEAMRQGAQQPVPGDPFAELAQALAADA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZN23</accession>
    <name>A0A0M6ZN23_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">yitJ</name>
        <name evidence="7" type="ORF">LAX5112_00011</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="3">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63631.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00011"/>
    <dbReference type="EnsemblBacteria" id="CTQ63631">
        <property type="protein sequence ID" value="CTQ63631"/>
        <property type="gene ID" value="LAX5112_00011"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003726">
        <property type="entry name" value="HCY_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036589">
        <property type="entry name" value="HCY_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02574">
        <property type="entry name" value="S-methyl_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82282">
        <property type="entry name" value="SSF82282"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50970">
        <property type="entry name" value="HCY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="1 3 7" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3 7" id="KW-0808">Transferase</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Hcy-binding" evidence="6">
        <location>
            <begin position="51"/>
            <end position="341"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="359"/>
            <end position="392"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="4">
        <location>
            <begin position="117"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="260"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="326"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="327"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00333"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ63631.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="392" mass="41358" checksum="1FC8E7EEE80D1544" modified="2015-12-09" version="1">MFYGFGPGAGSGQPKNRKTKPRVDIRAGSAIAGLRFAFGLETTRKDQKNMSKFEDFLAQKGALLADGATGTNLFDMGLVSGDAPELWNVDEPVKIKALYKSFVDAGSDIILTNTFGCNRHRLKLHNAQSRVKELNIAAVELAKDVIAESGRDVLIGGSIGPTGELFQPLGALSYEEGVEAFREQIEGLVDGGVDVLWVETMSAIEEMKAAAEAAQDFDLPLVITASFDTAGKTMMGLSPKGLGDLQDQFACTPVAIGSNCGVGASDLLAAIMEITEAYPDAVVVAKANCGIPQIKGDEVVYTGTPELMADYARMALDAGARIVGGCCGTSPSHLKAMRLALDDYKKGVRPTLDQVISEIGPLVSPPNKEADAARAAEGESAGSGRRRGRRRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZN50</accession>
    <name>A0A0M6ZN50_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">TRAP transporter solute receptor, TAXI family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00210</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64188.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00210"/>
    <dbReference type="EnsemblBacteria" id="CTQ64188">
        <property type="protein sequence ID" value="CTQ64188"/>
        <property type="gene ID" value="LAX5112_00210"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011852">
        <property type="entry name" value="TRAP_TAXI"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42941">
        <property type="entry name" value="PTHR42941"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16868">
        <property type="entry name" value="NMT1_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02122">
        <property type="entry name" value="TRAP_TAXI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0675">Receptor</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ64188.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="346" mass="36963" checksum="9C47E4BF7CBF8D0D" modified="2015-12-09" version="1">MQQYRTLMGALGLGKKSMSMLAQFPSNSSLITVAGFCCIALTAPAVAKDQVFLTLATGGVTGVYHPAGTEICRAVNKSRSKHGVRCAAEAGRGSVGSLKQLRDRDVDFAIVQADWQHHAYLGTSVFSEYGPMEDLRVVAGLHTEMAAIVVRADSGFMDVSDLKGQRINIGPAGSGSAATWGQLTQHLPWSEEDRAAITQEDLSGLGEALCVGEIDAYFVVIGHPAGVIEETQEVCPVQFIEIGADISEKMVADTPYYRAAEIPSGAYGEHNAIETIGTRALLVTVEQMPAHAVSTVLRSLLSDIERFRTVHPALTDLAGALFVEAKTEAPLHLGAVQFYQDQGYLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZN63</accession>
    <name>A0A0M6ZN63_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Alpha/beta hydrolase family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00027</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63671.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670090.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00027"/>
    <dbReference type="EnsemblBacteria" id="CTQ63671">
        <property type="protein sequence ID" value="CTQ63671"/>
        <property type="gene ID" value="LAX5112_00027"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022742">
        <property type="entry name" value="Hydrolase_4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017208">
        <property type="entry name" value="UCP037442_abhydr"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12146">
        <property type="entry name" value="Hydrolase_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF037442">
        <property type="entry name" value="UCP037442_abhydr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Hydrolase_4" evidence="1">
        <location>
            <begin position="28"/>
            <end position="118"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ63671.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="294" mass="32748" checksum="54A493DB8019C183" modified="2015-12-09" version="1">MSTVQSQSLTFQAEDGWQLTGDLYFGPSPKVAILVSSGTGFPRRFYRHMAAYMAGQGAVVLTYDYRGIGGSKTASIARSAIDLPDWGRLDMPAAIDVLEAQVPELPITHLAHSVGGHFLGLMPNHDKIARNAFLAVSTGYIGHHAAHYRPMEAYFWWGLGSYSLMRHGQLKPIGGWRGEALPPEVFKTWRRWSHSPTYFQKDFETTLTPQHYDQVRSPIRSWLFTDDPIATPKAHEVLLDAYPNAPKSLTFTSPKDLNVKRIGHEGAFKPECAPLWADVFEWLANGTEIHGAAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZNX1</accession>
    <name>A0A0M6ZNX1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Urea ABC transporter, permease protein UrtB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_00301</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64448.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670278.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00301"/>
    <dbReference type="EnsemblBacteria" id="CTQ64448">
        <property type="protein sequence ID" value="CTQ64448"/>
        <property type="gene ID" value="LAX5112_00301"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001851">
        <property type="entry name" value="ABC_transp_permease"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02653">
        <property type="entry name" value="BPD_transp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="21"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="64"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="94"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="117"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="147"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="192"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="236"/>
            <end position="259"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="271"/>
            <end position="290"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="297"/>
            <end position="318"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="324"/>
            <end position="345"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ64448.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="364" mass="38597" checksum="50D23BD017371128" modified="2015-12-09" version="1">MRIELVKRKEHSELMSLMSPLIAVGLTALSAAIIFSISGVNPALGLYKFFIEPLTEQWSLEATIEKATPLILIGCGLAVCYLSNNWNIGAEGQFVVGAMFGSILPVMFPSFENSLTLPLMLVCGVIGGALWAMIPALLKTRFNTNEILTSLMLVYVAGLLLDYLVRGPWRDPDGFNFPESRIFSDAATLPEVFGGMMSLATPITIIVALVLALVLAKTIKGFEIRVMGESPRAGSFAGFSVKGLTIFSFALAGGLAGLAGTMVVSGSLNQLLPSISPGYGFTAIIVAFLGRLNPIGIIIAGFVLALSYIGGEGVQSGLGVSNKIASVIQGLLLFYVLACDTLILYRIRMVSRRAANPAGEVSHV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPH6</accession>
    <name>A0A0M6ZPH6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6 9">Cysteine desulfurase</fullName>
            <ecNumber evidence="5 9">2.8.1.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">csd_1</name>
        <name evidence="11" type="ORF">LAX5112_00154</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.</text>
    </comment>
    <comment type="function">
        <text evidence="3">Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Seems to participate in the biosynthesis of the nitrogenase metalloclusters by providing the inorganic sulfur required for the Fe-S core formation.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 9">
            <text>[sulfur carrier]-H + L-cysteine = [sulfur carrier]-SH + L-alanine</text>
            <dbReference type="Rhea" id="RHEA:43892"/>
            <dbReference type="Rhea" id="RHEA-COMP:14737"/>
            <dbReference type="Rhea" id="RHEA-COMP:14739"/>
            <dbReference type="ChEBI" id="CHEBI:29917"/>
            <dbReference type="ChEBI" id="CHEBI:35235"/>
            <dbReference type="ChEBI" id="CHEBI:57972"/>
            <dbReference type="ChEBI" id="CHEBI:64428"/>
            <dbReference type="EC" id="2.8.1.7"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 8">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="4 9">Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. Csd subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.8.1.7" evidence="5 9"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64030.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670173.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00154"/>
    <dbReference type="EnsemblBacteria" id="CTQ64030">
        <property type="protein sequence ID" value="CTQ64030"/>
        <property type="gene ID" value="LAX5112_00154"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031071">
        <property type="term" value="F:cysteine desulfurase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006534">
        <property type="term" value="P:cysteine metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd06453">
        <property type="entry name" value="SufS_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000192">
        <property type="entry name" value="Aminotrans_V_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020578">
        <property type="entry name" value="Aminotrans_V_PyrdxlP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010970">
        <property type="entry name" value="Cys_dSase_SufS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016454">
        <property type="entry name" value="Cysteine_dSase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00266">
        <property type="entry name" value="Aminotran_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005572">
        <property type="entry name" value="NifS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01979">
        <property type="entry name" value="sufS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00595">
        <property type="entry name" value="AA_TRANSFER_CLASS_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 9" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9 11" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Aminotran_5" evidence="10">
        <location>
            <begin position="37"/>
            <end position="406"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001357"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00003120"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00010447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00013558"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU004504"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU004506"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF00266"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ64030.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="418" mass="45962" checksum="D1A62AE16E5561CC" modified="2015-12-09" version="1">MTVATAQETTISTAYDVEAIRKDFPILAREVYGKPLVYLDNGASAQKPQAVIDAVTKAYSHEYANVHRGLHYLSNTATDNYEAARETVRRFLNAGSVNDIVFTKSTTEAINLVAYGLGGKFFAEGDEIVLSIMEHHSNIVPWHFHRERHGAKLKWVYVREDGSFDLDAFKDALSDRTKLVAITHMSNVLGTVVPVKEICEIAHERGIQVLVDGSQSAVHMPVDVQDIGCDYYVFTGHKVYGPSGIGVLYGKPERLEALRPFQGGGEMILDVTEDDVTYNAPPHRFEAGTPPIVQAIGLGAALDYMDSVGRENIARHEDDLKVYAHEKLRQINSLRIFGDAPEKGAIISFEIEGAHAHDVSTIIDRSGVAVRAGTHCAQPLLAKYGVTSTCRASFGMYNTRDEVDALYEALVKAQSFFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPL7</accession>
    <name>A0A0M6ZPL7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">N-acetyltransferase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00366</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64688.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_050776190.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00366"/>
    <dbReference type="EnsemblBacteria" id="CTQ64688">
        <property type="protein sequence ID" value="CTQ64688"/>
        <property type="gene ID" value="LAX5112_00366"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045057">
        <property type="entry name" value="Gcn5-rel_NAT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031165">
        <property type="entry name" value="GNAT_YJDJ"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31435">
        <property type="entry name" value="PTHR31435"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14542">
        <property type="entry name" value="Acetyltransf_CG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51729">
        <property type="entry name" value="GNAT_YJDJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="12"/>
            <end position="100"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64688.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="101" mass="10946" checksum="F7DE2E5D155EF55C" modified="2015-12-09" version="1">MSHTAEITITLTKDGAKGRYVASVAGIDEPAELTFSIVSEHMIIADHTGVPDSMRGMGVGKALVERLVADARENSIKIVPLCPYVNAQRQKHPEWADVFQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQ12</accession>
    <name>A0A0M6ZQ12_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Glucose-resistance amylase regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ccpA_1</name>
        <name evidence="5" type="ORF">LAX5112_00413</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64818.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670384.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00413"/>
    <dbReference type="EnsemblBacteria" id="CTQ64818">
        <property type="protein sequence ID" value="CTQ64818"/>
        <property type="gene ID" value="LAX5112_00413"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01392">
        <property type="entry name" value="HTH_LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000843">
        <property type="entry name" value="HTH_LacI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025997">
        <property type="entry name" value="SBP_2_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00356">
        <property type="entry name" value="LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13407">
        <property type="entry name" value="Peripla_BP_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00036">
        <property type="entry name" value="HTHLACI"/>
    </dbReference>
    <dbReference type="SMART" id="SM00354">
        <property type="entry name" value="HTH_LACI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50932">
        <property type="entry name" value="HTH_LACI_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH lacI-type" evidence="4">
        <location>
            <begin position="4"/>
            <end position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ64818.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="345" mass="37818" checksum="FEA50548E997840E" modified="2015-12-09" version="1">MKRVTIHDVAEAAGVSLATVDRVLNTRPGVRKATIEKVRQAVERLNYQPDVFAAGLAKKSAYRLHFLIPNGPNAFMEDLTREAKAHAQSMSGARMQVHVEPIDAFDGHRVTGTLAVLDKSVCDGVAVVAPAFPEVRAAIDRLQDRGVPVVTLVSDHPASARQHFVGINNVAAGRTAGRLMGRFLPKEPGKIALIAGSLGLRDHADRYTGCREVVDNEYPHLELVKVREGRDDNRRNEDLVRKLLSEHPDLSAVYNIGAGNRGVIAAIRDNDRTDDIVFVGHELTPYTRQALRDGIMDAVIAQDPGHEIRSAIRVLKALCDGVPIIEDQERIGIDVFLKENLPEDV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQB0</accession>
    <name>A0A0M6ZQB0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">GTPase HflX</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">GTP-binding protein HflX</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5 11" type="primary">hflX</name>
        <name evidence="11" type="ORF">LAX5112_00248</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="7">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="5">Monomer. Associates with the 50S ribosomal subunit.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cytoplasm</location>
        </subcellularLocation>
        <text evidence="5">May associate with membranes.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64300.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00248"/>
    <dbReference type="EnsemblBacteria" id="CTQ64300">
        <property type="protein sequence ID" value="CTQ64300"/>
        <property type="gene ID" value="LAX5112_00248"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01878">
        <property type="entry name" value="HflX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.11060">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00900">
        <property type="entry name" value="GTPase_HflX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030394">
        <property type="entry name" value="G_HFLX_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006073">
        <property type="entry name" value="GTP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032305">
        <property type="entry name" value="GTP-bd_M"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016496">
        <property type="entry name" value="GTPase_HflX"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025121">
        <property type="entry name" value="GTPase_HflX_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042108">
        <property type="entry name" value="GTPase_HflX_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045498">
        <property type="entry name" value="HflX_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10229">
        <property type="entry name" value="PTHR10229"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16360">
        <property type="entry name" value="GTP-bdg_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13167">
        <property type="entry name" value="GTP-bdg_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19275">
        <property type="entry name" value="HflX_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01926">
        <property type="entry name" value="MMR_HSR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006809">
        <property type="entry name" value="GTP-binding_hflX_prd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00326">
        <property type="entry name" value="GTP1OBG"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03156">
        <property type="entry name" value="GTP_HflX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51705">
        <property type="entry name" value="G_HFLX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 5 6" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="3 7" id="KW-0460">Magnesium</keyword>
    <keyword evidence="1 7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2 5 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Hflx-type G" evidence="10">
        <location>
            <begin position="240"/>
            <end position="410"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="8">
        <location>
            <begin position="199"/>
            <end position="233"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="246"/>
            <end position="253"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="253"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="271"/>
            <end position="275"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="273"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="293"/>
            <end position="296"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="362"/>
            <end position="365"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR006809-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR006809-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ64300.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="471" mass="52524" checksum="A3F6AD0C8DF45F99" modified="2015-12-09" version="1">MKPKSREDDFSKSNGSEEPGQKSLRQKDTGVDRLPQRFRAMILEPIIQLRSENSQADLRSNRSPEARLDEAIGLSAAINLDIVHSGVVRINNPKPATLFGEGKVAELAGIVASEDLDLVVIDHPLSPVQQRNLERRLKTKVIDRTGLILEIFGDRARTKEGKLQVDLAHLTWQKSRLVRSWTHLERQRGGAGFMGGPGETQIEADRRQIQERIIALQKQLESVRRTRELHRKKRKKIPQPVVALVGYTNAGKSTLFNRLTESEVFAKDLLFATLDPTLRKITLPHGREIILSDTVGFISDLPTHLVAAFRATLEEVLEADLILHVRDISHADTDAQAEDVQKTLEELGVDALTGAPIIEVWNKIDLLDKDYRAKLLSDEQGEGPVALSAVTGEGIDHLSARVDSLMARHDDILSVRVPVAEGALIAKLYQMAEVLERSDGEENVIAEVRVSDKQRGPFRDLFGRFVIDPSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZR67</accession>
    <name>A0A0M6ZR67_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00145</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64004.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670166.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00145"/>
    <dbReference type="EnsemblBacteria" id="CTQ64004">
        <property type="protein sequence ID" value="CTQ64004"/>
        <property type="gene ID" value="LAX5112_00145"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009702">
        <property type="entry name" value="DUF1284"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06935">
        <property type="entry name" value="DUF1284"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ64004.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="142" mass="15706" checksum="8C1D4BBBACBDB964" modified="2015-12-09" version="1">MTIRLRAHHLLCMLTFAGKGYTPAFVASYKAIVKRLNDGAAIELVDGPDDICVPMLNDNTCHCYNESVRERDRLAAHNIGLLLSGKPLSIGPLRINGEDISRLRSAFQDGSIRQACAGCEWYELCTGIAQTDFRGCRLRPPQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRX3</accession>
    <name>A0A0M6ZRX3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Diacetyl reductase [(S)-acetoin forming]</fullName>
            <ecNumber evidence="1">1.1.1.304</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">budC_1</name>
        <name evidence="1" type="ORF">LAX5112_00480</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.1.1.304" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65012.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670431.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00480"/>
    <dbReference type="EnsemblBacteria" id="CTQ65012">
        <property type="protein sequence ID" value="CTQ65012"/>
        <property type="gene ID" value="LAX5112_00480"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052588">
        <property type="term" value="F:diacetyl reductase ((S)-acetoin forming) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ65012.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="265" mass="27929" checksum="E33F50D1F4BA9612" modified="2015-12-09" version="1">MGRLSGRSCIVTGAARGIGRAIGEALLSEGADVCFADINGEQVESVAADSHSISNTNGAKVTWAKVDVTDRQQVQDMIGKAVSAFGKLDVKFNNAGVNKPMNFLDVTEDNWNYIMGVNGLGCMIGMQEAAKQMIAQGTGGKIVNTASIASRQGFGNVASYCASKWAVVSLTQSGARDLAPYNITVTGFAPGVVATEMWEQVDQDLMEIGAAERPGQAMEEFSAEILKGRVAKPHDITGTTNFLASKDSDYMTGQIVMIDGGMTLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZS27</accession>
    <name>A0A0M6ZS27_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">D-allose transport system permease protein AlsC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">alsC</name>
        <name evidence="7" type="ORF">LAX5112_00478</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65006.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670430.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00478"/>
    <dbReference type="EnsemblBacteria" id="CTQ65006">
        <property type="protein sequence ID" value="CTQ65006"/>
        <property type="gene ID" value="LAX5112_00478"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001851">
        <property type="entry name" value="ABC_transp_permease"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02653">
        <property type="entry name" value="BPD_transp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="12"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="53"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="76"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="102"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="133"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="172"/>
            <end position="193"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="223"/>
            <end position="243"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="303"/>
            <end position="319"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ65006.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="333" mass="35554" checksum="1866DCDE034E047D" modified="2015-12-09" version="1">MEPGTLSTFLKRGAIWGFIVLQLMFFSVAGKYLSLSDTAFMDLDNMLLLLKQSAPIGIIAIGMTVIMINGNIDLSVGAIFALAAVVMLDSMTWPIFADLGDWVIPVAWALALLTGVALGAINGLIVWKTGVDAFIVTLGAMLGYRGLVFMYNGEQPTSHLNWTLVDFAEAQVLGLPTAAWFLLGTVAVVWFIMNRTVHGRNAYAIGDNREAAVNAGIRVGPHFLINFMLIGFLAALSAVVFYSESGSVNPNDGQLYELWAITAVVLGGTKLTGGSGSIISTLGGVIAIQLLRKGLGHIGADTETVNLVIGLILIAVLFLDRQLNLKGKQELRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSA2</accession>
    <name>A0A0M6ZSA2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Endolytic peptidoglycan transglycosylase RlpA</fullName>
            <ecNumber evidence="3">4.2.2.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">rlpA</name>
        <name evidence="7" type="ORF">LAX5112_00284</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 4">Belongs to the RlpA family.</text>
    </comment>
    <dbReference type="EC" id="4.2.2.-" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64404.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670263.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00284"/>
    <dbReference type="EnsemblBacteria" id="CTQ64404">
        <property type="protein sequence ID" value="CTQ64404"/>
        <property type="gene ID" value="LAX5112_00284"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008932">
        <property type="term" value="F:lytic endotransglycosylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000270">
        <property type="term" value="P:peptidoglycan metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02071">
        <property type="entry name" value="RlpA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034718">
        <property type="entry name" value="RlpA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009009">
        <property type="entry name" value="RlpA-like_DPBB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036908">
        <property type="entry name" value="RlpA-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012997">
        <property type="entry name" value="RplA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03330">
        <property type="entry name" value="DPBB_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50685">
        <property type="entry name" value="SSF50685"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00413">
        <property type="entry name" value="rlpA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="1 3" id="KW-0456">Lyase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DPBB_1" evidence="6">
        <location>
            <begin position="113"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="8"/>
            <end position="24"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02071"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003495"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF03330"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ64404.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="366" mass="38604" checksum="78744A6140EC47F8" modified="2015-12-09" version="1">MHGIGGQTWRSNDKSIEDTGIISSRNDRTGSVMRQVRTFLMVAAAAGFVAACGSAPQEKAKFSPKKYGVKGSPKVVAAGKPVPKGGGRYVVGKKYKIAGKWYYPKHEPNYKNVGLSSWYGPTFHGRKTANGEVFDRNALTAAHTTMPLPSYARVTNVNNGRSMIVRVNDRGPFHGNRIIDLSERVANMLDTKSAGVAKVKVEYVGRAPLHGQDETYLMASYNGPGAVQPGTSRPGTLIAQNAPRLVVGPTQAPPPRPYRPSATLASAATPGTTIAAAFDPAIAFEAGSNSVQVAANNRFEPQPAARAPESGVLGTLTVPADQGLTPGSAISSYMANQRVSDAHEMLTFASGSGLSLKLLARQAAVD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZST1</accession>
    <name>A0A0M6ZST1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Probable branched-chain-amino-acid aminotransferase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">pabB</name>
        <name evidence="4" type="ORF">LAX5112_00606</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Acts on leucine, isoleucine and valine.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65377.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00606"/>
    <dbReference type="EnsemblBacteria" id="CTQ65377">
        <property type="protein sequence ID" value="CTQ65377"/>
        <property type="gene ID" value="LAX5112_00606"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008483">
        <property type="term" value="F:transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009396">
        <property type="term" value="P:folic acid-containing compound biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.470.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005802">
        <property type="entry name" value="ADC_synth_comp_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005801">
        <property type="entry name" value="ADC_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001544">
        <property type="entry name" value="Aminotrans_IV"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036038">
        <property type="entry name" value="Aminotransferase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019999">
        <property type="entry name" value="Anth_synth_I-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043132">
        <property type="entry name" value="BCAT-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043131">
        <property type="entry name" value="BCAT-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015890">
        <property type="entry name" value="Chorismate_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11236">
        <property type="entry name" value="PTHR11236"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01063">
        <property type="entry name" value="Aminotran_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00425">
        <property type="entry name" value="Chorismate_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00095">
        <property type="entry name" value="ANTSNTHASEI"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56322">
        <property type="entry name" value="SSF56322"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56752">
        <property type="entry name" value="SSF56752"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00553">
        <property type="entry name" value="pabB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Chorismate_bind" evidence="3">
        <location>
            <begin position="127"/>
            <end position="379"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00014472"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00425"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ65377.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="619" mass="69265" checksum="90036FE8256C89DC" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTA0</accession>
    <name>A0A0M6ZTA0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Universal stress protein family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_00356</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the universal stress protein A family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64663.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670345.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00356"/>
    <dbReference type="EnsemblBacteria" id="CTQ64663">
        <property type="protein sequence ID" value="CTQ64663"/>
        <property type="gene ID" value="LAX5112_00356"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006015">
        <property type="entry name" value="Universal_stress_UspA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006016">
        <property type="entry name" value="UspA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00582">
        <property type="entry name" value="Usp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01438">
        <property type="entry name" value="UNVRSLSTRESS"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Usp" evidence="2">
        <location>
            <begin position="155"/>
            <end position="276"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008791"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00582"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ64663.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="277" mass="29676" checksum="E92A2BA6D6BA0212" modified="2015-12-09" version="1">MPIKDILTVLDLAGDQPAAKYALEFGRVHDAHVTGLAVSFEPVVPAFAAAPMPVDYLQAAHDQAIAAAKDAKDQFDEFARLVGVKNESRLAEILTGGPLDNVLAHCRPTDLVVIGQSNPDKPEPMRELLIETILFESGVPVLLVPYIGSKSFEPKNVLVGWDGSSTATRAILSAIPVLEKADKVTVLVIEKKANSQAGQPGAEVANYLARHNMNVTIDVVSNPQTGVADTVLNYVTDNSNDLVVMGGYGHSRMREFLFGGATREILEAMTVPVLMAH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTX8</accession>
    <name>A0A0M6ZTX8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="13">Multiple resistance and pH homeostasis protein A</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">mrpA_1</name>
        <name evidence="13" type="ORF">LAX5112_00466</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1 7">Membrane</location>
            <topology evidence="1 7">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64974.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00466"/>
    <dbReference type="EnsemblBacteria" id="CTQ64974">
        <property type="protein sequence ID" value="CTQ64974"/>
        <property type="gene ID" value="LAX5112_00466"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025383">
        <property type="entry name" value="MbhD-like_TM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007182">
        <property type="entry name" value="MnhB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001750">
        <property type="entry name" value="ND/Mrp_mem"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001516">
        <property type="entry name" value="Proton_antipo_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13244">
        <property type="entry name" value="DUF4040"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04039">
        <property type="entry name" value="MnhB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00361">
        <property type="entry name" value="Proton_antipo_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00662">
        <property type="entry name" value="Proton_antipo_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="20"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="50"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="96"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="129"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="152"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="183"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="225"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="262"/>
            <end position="280"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="292"/>
            <end position="312"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="319"/>
            <end position="339"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="345"/>
            <end position="369"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="381"/>
            <end position="404"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="424"/>
            <end position="449"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="469"/>
            <end position="488"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="523"/>
            <end position="541"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="587"/>
            <end position="606"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="626"/>
            <end position="646"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="651"/>
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        </source>
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            <dbReference type="Pfam" id="PF13244"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="EMBL" id="CTQ64974.1"/>
        </source>
    </evidence>
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        </source>
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    <sequence length="973" mass="101988" checksum="3D7CCCAAFF52AD33" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZU59</accession>
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        <submittedName>
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</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="26" xmlns="http://uniprot.org/uniprot">
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    </dbReference>
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    </dbReference>
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    </dbReference>
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    </dbReference>
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    </dbReference>
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    </dbReference>
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    </dbReference>
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    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0274">FAD</keyword>
    <keyword evidence="1" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="2 5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="2Fe-2S ferredoxin-type" evidence="3">
        <location>
            <begin position="5"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="domain" description="FAD-binding PCMH-type" evidence="4">
        <location>
            <begin position="195"/>
            <end position="368"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
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        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
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        </source>
    </evidence>
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            <dbReference type="PROSITE" id="PS51085"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="PROSITE" id="PS51387"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ65802.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="487" mass="52741" checksum="38E40B0090E994F9" modified="2015-12-09" version="1">MNHRTEIRFLLNGRNVAVNDVEADATLLDFLRLDRRLTGTKEGCAEGDCGACTVLVGRLQDGQLIYETVNACIRFTASLDGCHVVTIEHLRGENGQLHPIQQAMVDYHGSQCGFCTPGFVMSLYALWMASPEPTEAEVETAIQGNLCRCTGYQPIIAAALAANRYGTPANDFLIKEREAITDRLLALRDGRRVVCGPEDNRAVVPSSVDDLADVLAEYPEATIVAGSTDVGLWVTKFMRPIGPAVFIAHLEELKSITVCENALRIGAGVTYTEAQQSLCEEFPHLEAYWDRIAGRQVRNMGTIGGNIANGSPIGDTPPVLIALAAEITLRKGNVSRRLPLEDFFIEYGKQDRAPGEFVESISIPRTSPNQLHGAYKISKRRDEDISSVAAGFNVTVENGIITAAFLAFGGMAGTPKRAAAAEAALTGQPWGQAAFIAAAKALEADFQPLSDWRASAEYRITVARNLLQRFFLAHDDQSAEAADLLSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZV06</accession>
    <name>A0A0M6ZV06_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01028</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66605.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670919.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01028"/>
    <dbReference type="EnsemblBacteria" id="CTQ66605">
        <property type="protein sequence ID" value="CTQ66605"/>
        <property type="gene ID" value="LAX5112_01028"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003772">
        <property type="entry name" value="YceD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02620">
        <property type="entry name" value="YceD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="150"/>
            <end position="192"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66605.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="192" mass="21106" checksum="2B6EDAE27AAD0E8B" modified="2015-12-09" version="1">MANETFPYSHKVNAARVVDMDEKITVTPNQGERAAIAKAYDLDGVKSLVADLVLKPYRKAGLRVAGRITAELEQTCVVSLEPFVQELKLDIDRTFEPHSSRPRKIRDLNEDGEIEIDLESLDPPDVITDGVLDLGNVICEELALALDPFPRKPGVEFESGNDGAADPQDRLEESDKPSPFAALSALKEPPKQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZV68</accession>
    <name>A0A0M6ZV68_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Thiamine-monophosphate kinase</fullName>
            <shortName evidence="2">TMP kinase</shortName>
            <shortName evidence="2">Thiamine-phosphate kinase</shortName>
            <ecNumber evidence="2">2.7.4.16</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2 5" type="primary">thiL</name>
        <name evidence="5" type="ORF">LAX5112_01033</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Catalyzes the ATP-dependent phosphorylation of thiamine-monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>ATP + thiamine phosphate = ADP + thiamine diphosphate</text>
            <dbReference type="Rhea" id="RHEA:15913"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:37575"/>
            <dbReference type="ChEBI" id="CHEBI:58937"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.4.16"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Cofactor biosynthesis; thiamine diphosphate biosynthesis; thiamine diphosphate from thiamine phosphate: step 1/1.</text>
    </comment>
    <comment type="miscellaneous">
        <text evidence="2">Reaction mechanism of ThiL seems to utilize a direct, inline transfer of the gamma-phosphate of ATP to TMP rather than a phosphorylated enzyme intermediate.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the thiamine-monophosphate kinase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.7.4.16" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66618.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670923.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01033"/>
    <dbReference type="EnsemblBacteria" id="CTQ66618">
        <property type="protein sequence ID" value="CTQ66618"/>
        <property type="gene ID" value="LAX5112_01033"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00060">
        <property type="reaction ID" value="UER00142"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009030">
        <property type="term" value="F:thiamine-phosphate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009228">
        <property type="term" value="P:thiamine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009229">
        <property type="term" value="P:thiamine diphosphate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd02194">
        <property type="entry name" value="ThiL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.650.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02128">
        <property type="entry name" value="TMP_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010918">
        <property type="entry name" value="PurM-like_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036676">
        <property type="entry name" value="PurM-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016188">
        <property type="entry name" value="PurM-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036921">
        <property type="entry name" value="PurM-like_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006283">
        <property type="entry name" value="ThiL"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30270">
        <property type="entry name" value="PTHR30270"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00586">
        <property type="entry name" value="AIRS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02769">
        <property type="entry name" value="AIRS_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005303">
        <property type="entry name" value="Thiam_monoph_kin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55326">
        <property type="entry name" value="SSF55326"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56042">
        <property type="entry name" value="SSF56042"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01379">
        <property type="entry name" value="thiL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 5" id="KW-0418">Kinase</keyword>
    <keyword evidence="2" id="KW-0460">Magnesium</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0784">Thiamine biosynthesis</keyword>
    <keyword evidence="2 5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="AIRS" evidence="3">
        <location>
            <begin position="30"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="domain" description="AIRS_C" evidence="4">
        <location>
            <begin position="154"/>
            <end position="310"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="31"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="46"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>4</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="48"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="55"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="76"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <begin position="123"/>
            <end position="124"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="124"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="150"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="220"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>3</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="222"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="223"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>5</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="272"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="329"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00586"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF02769"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ66618.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="332" mass="34518" checksum="8EFFF8096FB11EA7" modified="2015-12-09" version="1">MAADRPGEFELIKRFFAPLAKDPGSLGLTDDAAVLKPRPDFDLVLTKDVLAANVHFFAEDAPEAIAAKSLRVNLSDLAAKGATPRGYLLGIALPKGWTADWLDRFCKGLAADQAAYDIQLLGGDTIRSSNGLQVSITAIGEVPSGQAVRRCGAKAGDILFATGTIGDAAAGLKARLDRGFASRAGLAANGEAHILDRYLLPRPRTRLAPLIVKYANASMDISDGLLSDAGHMASASSSTIQINLESVPLSPALTYLKSAAPDVFFACLNGGDDYEILVSVPEAVSQAFSAAASGLGCPVTAVGRVVDGEGAVKLLDNGVPVSADLQNGFRHF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZW31</accession>
    <name>A0A0M6ZW31_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">TRAP transporter solute receptor, TAXI family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01156</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66958.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01156"/>
    <dbReference type="EnsemblBacteria" id="CTQ66958">
        <property type="protein sequence ID" value="CTQ66958"/>
        <property type="gene ID" value="LAX5112_01156"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011852">
        <property type="entry name" value="TRAP_TAXI"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42941">
        <property type="entry name" value="PTHR42941"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16868">
        <property type="entry name" value="NMT1_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02122">
        <property type="entry name" value="TRAP_TAXI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0675">Receptor</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809008" evidence="1">
        <location>
            <begin position="25"/>
            <end position="322"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66958.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="322" mass="34395" checksum="314623F1988D767F" modified="2015-12-09" version="1">MMMKLNLAGAVLATSIAFTGAAAAEEFITIGTGGVTGVYYPTGGAICRLVNRDRKDHGIRCSVESTGGSVYNINTIREGELEFGVAQSDWQFHAYNGTSKFEEKGPFEELRAVFSVHPEPFTVVARADSGITTFDDLKGKRVNIGNPGSGQRGTMEVLMEAKGWTADDFELATELKAAEQSAALCDNQIDAMVYTVGHPSGSIQEATTACDSVLVTVGGDAVDKLVSDNSYYRTATIPGGMYRGNDADTGTFGVGATFVTSANVSEDTVYTLVKSVFENFDAFKKLHPAFANLKPEEMAQDGLSAPLHPGAAKYYKEKGWIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWT7</accession>
    <name>A0A0M6ZWT7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Acyl-CoA esterase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01074</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66737.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670948.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01074"/>
    <dbReference type="EnsemblBacteria" id="CTQ66737">
        <property type="protein sequence ID" value="CTQ66737"/>
        <property type="gene ID" value="LAX5112_01074"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000073">
        <property type="entry name" value="AB_hydrolase_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00561">
        <property type="entry name" value="Abhydrolase_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AB hydrolase-1" evidence="1">
        <location>
            <begin position="48"/>
            <end position="290"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00561"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66737.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="304" mass="33419" checksum="A1FB7055CD675D2A" modified="2015-12-09" version="1">MTLAPEEPPHAAPSGAPVSLTYQSPDGLTLAAKEWPVPQSAQKDEKVTVLCLPGLSRNTRDFNEIAAFLQGQGHRVIALDYRGRGDSDWDPEWQNYALPVEEKDIDAAIEAFELERFAVLGTSRGGLHALAMAHRYPPNRLAAVIFNDIGPHIEMRAIHRIAATLGRNMSYASLDEVASSLRHMLGMQFPVFSADDWLKMADQVASEKDGKVVLDYDPALGHQFASLDDGAPVPDLWPLYEFLKDRPVMVIRGAKSDLLGEDTAQRMLDSHPKATLHTVAGQGHAPVLWDSETHERIGGFLSKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="34" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWV7</accession>
    <name>A0A0M6ZWV7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">DNA topoisomerase 4 subunit A</fullName>
            <ecNumber evidence="5">5.6.2.2</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Topoisomerase IV subunit A</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5 8" type="primary">parC</name>
        <name evidence="8" type="ORF">LAX5112_01067</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 5">
            <text>ATP-dependent breakage, passage and rejoining of double-stranded DNA.</text>
            <dbReference type="EC" id="5.6.2.2"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="5">Heterotetramer composed of ParC and ParE.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 1 subfamily.</text>
    </comment>
    <dbReference type="EC" id="5.6.2.2" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66716.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670944.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01067"/>
    <dbReference type="EnsemblBacteria" id="CTQ66716">
        <property type="protein sequence ID" value="CTQ66716"/>
        <property type="gene ID" value="LAX5112_01067"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005694">
        <property type="term" value="C:chromosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019897">
        <property type="term" value="C:extrinsic component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003918">
        <property type="term" value="F:DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007059">
        <property type="term" value="P:chromosome segregation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006265">
        <property type="term" value="P:DNA topological change"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00187">
        <property type="entry name" value="TOP4c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.268.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.120.10.90">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.199.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00936">
        <property type="entry name" value="ParC_type1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006691">
        <property type="entry name" value="GyrA/parC_rep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035516">
        <property type="entry name" value="Gyrase/topoIV_suA_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013760">
        <property type="entry name" value="Topo_IIA-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013758">
        <property type="entry name" value="Topo_IIA_A/C_ab"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013757">
        <property type="entry name" value="Topo_IIA_A_a_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002205">
        <property type="entry name" value="Topo_IIA_dom_A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005742">
        <property type="entry name" value="TopoIV_A_Gneg"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03989">
        <property type="entry name" value="DNA_gyraseA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00521">
        <property type="entry name" value="DNA_topoisoIV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00434">
        <property type="entry name" value="TOP4c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101904">
        <property type="entry name" value="SSF101904"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56719">
        <property type="entry name" value="SSF56719"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="3 5" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4 5 8" id="KW-0413">Isomerase</keyword>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0799">Topoisomerase</keyword>
    <feature type="domain" description="TOP4c" evidence="7">
        <location>
            <begin position="15"/>
            <end position="467"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="727"/>
            <end position="750"/>
        </location>
    </feature>
    <feature type="active site" description="O-(5'-phospho-DNA)-tyrosine intermediate" evidence="5">
        <location>
            <position position="126"/>
        </location>
    </feature>
    <feature type="site" description="Interaction with DNA" evidence="5">
        <location>
            <position position="46"/>
        </location>
    </feature>
    <feature type="site" description="Interaction with DNA" evidence="5">
        <location>
            <position position="82"/>
        </location>
    </feature>
    <feature type="site" description="Interaction with DNA" evidence="5">
        <location>
            <position position="84"/>
        </location>
    </feature>
    <feature type="site" description="Transition state stabilizer" evidence="5">
        <location>
            <position position="125"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000185"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023029"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="SMART" id="SM00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ66716.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="750" mass="83702" checksum="DDF3593101CF4E15" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWW2</accession>
    <name>A0A0M6ZWW2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Putative inner membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">LAX5112_00831</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the UPF0394 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65993.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670737.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00831"/>
    <dbReference type="EnsemblBacteria" id="CTQ65993">
        <property type="protein sequence ID" value="CTQ65993"/>
        <property type="gene ID" value="LAX5112_00831"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007272">
        <property type="entry name" value="Sulf_transp"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04143">
        <property type="entry name" value="Sulf_transp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="6"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="48"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="83"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="118"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="174"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="203"/>
            <end position="220"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="259"/>
            <end position="277"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="297"/>
            <end position="318"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="324"/>
            <end position="347"/>
        </location>
    </feature>
    <feature type="domain" description="Sulf_transp" evidence="8">
        <location>
            <begin position="28"/>
            <end position="340"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009590"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF04143"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ65993.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="368" mass="38305" checksum="F14D559FA1EA74F6" modified="2015-12-09" version="1">MPEFNLTLILPVFGVLAGCVLGFVGRASHFCTLSALERHWYAGDSSGLRTWVLAAVVALIGTQVLVAFGLADTGASFYLDPGFPWTGAILGGAMFGLGMALVGTCGFGAVLRLGGGSLRALVVLTVIGLAALAAQRGIVGLIRVPLVDDQMITFTAAGSQSMGDIASSLAGFDLRWLAALLMITFGLGWIFKESAYRSARAKIASAVAIGLVIPFGWWATTYVAANSFDPVQIEAGSFVVPVGDSILQLITYTGVWPDYGVGLIAGTLTGAILAALWKRDIRWEACDDARELGRHILGGTLMGIGGVFAMGCTVGQGITGFSTMAISAPIVMLSMAFGARVGLAWLVEGSALAAFRRNDGADHRHPAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXJ8</accession>
    <name>A0A0M6ZXJ8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01392</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67439.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671193.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67439">
        <property type="protein sequence ID" value="CTQ67439"/>
        <property type="gene ID" value="LAX5112_01392"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67439.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="235" mass="26343" checksum="AFE9DC8B5E9F5AA8" modified="2015-12-09" version="1">MTEDDERRAQIVGPFLQKHFDHRKQIRSQSASSNKNLLTAHQLALAAVVSYQNRIQGIKYDAGDAQITGRMALVAQFIQGVGITETAISEGLYAQAANLLKQELETLASIEEFEAKARKDGRTPKFRGRLTGFGRRYGEFNEIAHPTRQEVVEQLSSFTDGDRYGPTTVPQFNTELFQMLYGNQAMLIAMLFGQMQPLFVEAFGVDWDDTEVRLASTAIRILIDEGIIKEIPAKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXY0</accession>
    <name>A0A0M6ZXY0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01233</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67147.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67147">
        <property type="protein sequence ID" value="CTQ67147"/>
        <property type="gene ID" value="LAX5112_01233"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809036" evidence="1">
        <location>
            <begin position="22"/>
            <end position="128"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67147.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="128" mass="13453" checksum="EFF9C372E60093AB" modified="2015-12-09" version="1">MRKSLIVAAPAAVWPSFQVMALPLGYVAGDGIEILKDGVEWRVVLDSAATARVVGVLSGQIVPDDTEEFTSAQFAAAIGQCLVSVDGMTPAEIAALGPDDPRPILRGKAHFEAVLAKHGFTIQETPLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZY42</accession>
    <name>A0A0M6ZY42_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Putative L,D-transpeptidase YbiS</fullName>
            <ecNumber evidence="6">2.-.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">ybiS_2</name>
        <name evidence="6" type="ORF">LAX5112_01492</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Cell wall biogenesis; peptidoglycan biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the YkuD family.</text>
    </comment>
    <dbReference type="EC" id="2.-.-.-" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67715.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671303.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01492"/>
    <dbReference type="EnsemblBacteria" id="CTQ67715">
        <property type="protein sequence ID" value="CTQ67715"/>
        <property type="gene ID" value="LAX5112_01492"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00219"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071972">
        <property type="term" value="F:peptidoglycan L,D-transpeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd16913">
        <property type="entry name" value="YkuD_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.440.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005490">
        <property type="entry name" value="LD_TPept_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038063">
        <property type="entry name" value="Transpep_catalytic_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03734">
        <property type="entry name" value="YkuD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141523">
        <property type="entry name" value="SSF141523"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <keyword evidence="3 6" id="KW-0808">Transferase</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809038" evidence="4">
        <location>
            <begin position="26"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="domain" description="YkuD" evidence="5">
        <location>
            <begin position="40"/>
            <end position="167"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004752"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF03734"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ67715.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="170" mass="18721" checksum="51F2D5F53A691AEE" modified="2015-12-09" version="1">MRIISLLFAFAVFVAAALTLEKAQAAEVVGFSGHQFRPGTIVIKNSERRLYLVLNGRQAIRYKVAVGKRQKSWTGQAQITAKYIKPDWSPSPEVRRDFPHLPAVIRGGAPNNPMGIAAMTLSNGNYAIHGTNRPGSIGRAVSYGCIRMANHDIQDLFRRVQVRTPVIALP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZY62</accession>
    <name>A0A0M6ZY62_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01213</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67102.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01213"/>
    <dbReference type="EnsemblBacteria" id="CTQ67102">
        <property type="protein sequence ID" value="CTQ67102"/>
        <property type="gene ID" value="LAX5112_01213"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67102.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="123" mass="13557" checksum="29B6390EAE7F34B1" modified="2015-12-09" version="1">MTERIAPAMTGPETGPYDLHLDETGNLAMVRNSEAIGQHARQRLQSFEGEWFLDLQSGVPWLTDVMGKRFDPVLADAVMKSCLLDTDGVTEVTGFSTTFDRATRNLKSSSISVATIYDEEVSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYK1</accession>
    <name>A0A0M6ZYK1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Glutaredoxin 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01356</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67371.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01356"/>
    <dbReference type="EnsemblBacteria" id="CTQ67371">
        <property type="protein sequence ID" value="CTQ67371"/>
        <property type="gene ID" value="LAX5112_01356"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006749">
        <property type="term" value="P:glutathione metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010987">
        <property type="entry name" value="Glutathione-S-Trfase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036282">
        <property type="entry name" value="Glutathione-S-Trfase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040079">
        <property type="entry name" value="Glutathione_S-Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004045">
        <property type="entry name" value="Glutathione_S-Trfase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13417">
        <property type="entry name" value="GST_N_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00019">
        <property type="entry name" value="Glutathione_Transferase_(cytos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47616">
        <property type="entry name" value="SSF47616"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50405">
        <property type="entry name" value="GST_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50404">
        <property type="entry name" value="GST_NTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GST N-terminal" evidence="1">
        <location>
            <begin position="9"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="domain" description="GST C-terminal" evidence="2">
        <location>
            <begin position="90"/>
            <end position="217"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50404"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50405"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ67371.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="220" mass="25216" checksum="68CC051AF48B462D" modified="2015-12-09" version="1">MRDGNVMTDQPILYSFRRCPYAMRARLALMSSGLTVELREIVLRDKAPEFLETSPSATVPCLKSGTQVIDESLDIMVWALEQSDPDNWLKPETGSLNEMRALIATCDGPFKTNLDRYKYDTRYADADKASERSAASEFLKELDRRLDGSAWLFGARPCLADFAILPFVRQFANADRDWFDSQDWDNLKTWLVTFEKSDRFAAIMPKFSKWENGDTPILFP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYQ1</accession>
    <name>A0A0M6ZYQ1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01318</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67302.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671140.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01318"/>
    <dbReference type="EnsemblBacteria" id="CTQ67302">
        <property type="protein sequence ID" value="CTQ67302"/>
        <property type="gene ID" value="LAX5112_01318"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016758">
        <property type="term" value="F:hexosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007235">
        <property type="entry name" value="Glyco_trans_28_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04101">
        <property type="entry name" value="Glyco_tran_28_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glyco_tran_28_C" evidence="1">
        <location>
            <begin position="227"/>
            <end position="354"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04101"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67302.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="385" mass="41958" checksum="A5C86ED499B90CDE" modified="2015-12-09" version="1">MSLTAFIYVQHLLGTGHVVRATAIGKKLAERGVDVTLASGNQIPPTLDVEGLEVLELPGAKTANAEFSRLITLDGKDLDDDWRAMRTAETLKAFAAKPYDLLLTETYPFGRRQFEFELSVLMDTAKARANPPIIASSIRDILVPKQQLWKEEWMADKARDYFDKVLIHADPDFITLADSFPFAHKIEDLLAYTGYVVREGDRPEPPEGDGEDEVVVSCGGGAMSESLLSAAIDARPLSRRAEDCTWRVLAGHNVPEDEFKAYKARAGEGVIVERARPDFPGLLNRARLSISQGGYNTVLDVLEAGVPSVIVPFALATETEQEQRAKALANHGRVVVASEDMLTPERLAAAADDALALPRSSHKVLLGGADRSADILMDLLKARAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZC6</accession>
    <name>A0A0M6ZZC6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Non-specific serine/threonine protein kinase</fullName>
            <ecNumber evidence="3">2.7.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">stkP</name>
        <name evidence="5" type="ORF">LAX5112_01132</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>ATP + L-seryl-[protein] = ADP + H(+) + O-phospho-L-seryl-[protein]</text>
            <dbReference type="Rhea" id="RHEA:17989"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:11604"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:83421"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + L-threonyl-[protein] = ADP + H(+) + O-phospho-L-threonyl-[protein]</text>
            <dbReference type="Rhea" id="RHEA:46608"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11605"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.1"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.11.1" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66893.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670988.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01132"/>
    <dbReference type="EnsemblBacteria" id="CTQ66893">
        <property type="protein sequence ID" value="CTQ66893"/>
        <property type="gene ID" value="LAX5112_01132"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0106310">
        <property type="term" value="F:protein serine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006468">
        <property type="term" value="P:protein phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000719">
        <property type="entry name" value="Prot_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00069">
        <property type="entry name" value="Pkinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00220">
        <property type="entry name" value="S_TKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="SSF56112"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50011">
        <property type="entry name" value="PROTEIN_KINASE_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0418">Kinase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Protein kinase" evidence="4">
        <location>
            <begin position="36"/>
            <end position="313"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000775"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001433"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ66893.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="319" mass="35075" checksum="DCC6B55DBF5B9EBB" modified="2015-12-09" version="1">MAEADTDLGYSLAVDTMAEPTETMTPVPGLVLKARYLLIKEIGRGGQSLVFKARDLVAAKAGLSKADVALKIITAGPEIEPDFVALMHREARRLRDLVHPNIVRVYDMDRVQNLHFMVMEYLEGDTLSSFLRKAEGRKLEVAQVIRLVQDLGSALEFAHANGIIHSDLKPGNVFVQTDGSVKLIDFNISAPIAPSLRMDEEDTIRILIRLGAITPSYASPQRLEGHEPCAADDVFSLAVMVYLCLAGRRPFGPKNALEAMDASVQPERPDQLSSAQWTALMKGLAFDDAGRTPEITNFVTSFAAQRQSAADWIRSQLSW</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZH6</accession>
    <name>A0A0M6ZZH6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01436</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67572.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671264.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01436"/>
    <dbReference type="EnsemblBacteria" id="CTQ67572">
        <property type="protein sequence ID" value="CTQ67572"/>
        <property type="gene ID" value="LAX5112_01436"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.160">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036641">
        <property type="entry name" value="HPT_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47226">
        <property type="entry name" value="SSF47226"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67572.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="175" mass="19096" checksum="5142B5D3A1F37830" modified="2015-12-09" version="1">MAETAPDQDYEVLQPPTDLRKKVRELTPREARKFDPVKAAEAALQRIAPHFGNWMENEAKTLVGAWDSVKTDGISSETIDVLYQSAHNIKGQALTLGFPLVGDVASSFCHLLENIPTPNDLPVGLAEGFVEAIRAMVIEGAKDTANKTGVELLETLRTATDTYLAQFPAKETDDS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZV6</accession>
    <name>A0A0M6ZZV6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative peptidase</fullName>
            <ecNumber evidence="3">3.4.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01692</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.4.-.-" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68318.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671467.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01692"/>
    <dbReference type="EnsemblBacteria" id="CTQ68318">
        <property type="protein sequence ID" value="CTQ68318"/>
        <property type="gene ID" value="LAX5112_01692"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.350.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029149">
        <property type="entry name" value="Creatin/AminoP/Spt16_NTD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036005">
        <property type="entry name" value="Creatinase/aminopeptidase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000587">
        <property type="entry name" value="Creatinase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000994">
        <property type="entry name" value="Pept_M24"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01321">
        <property type="entry name" value="Creatinase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00557">
        <property type="entry name" value="Peptidase_M24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53092">
        <property type="entry name" value="SSF53092"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55920">
        <property type="entry name" value="SSF55920"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Creatinase_N" evidence="2">
        <location>
            <begin position="15"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_M24" evidence="1">
        <location>
            <begin position="158"/>
            <end position="366"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00557"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01321"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ68318.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="383" mass="41974" checksum="CCA161B0925526FE" modified="2015-12-09" version="1">MSIRHPFPKEELARRVARACAALSVNGLDGILISVPESIYWLTGLDHWGFFAAHVLVVNRNGEMALVCRAMEQITVDNQVRNAAFYGHKDHEELSDYVLKAMADLGLKGGRVGIEKRSLFLTPRHAERIQEGDADWVDASGIVDNLRQVQSPLEMDYTRKAARAADLGTLAAIETVRDGASDYEIAAAYHNRMILEGSEYPGFGPFIRPTTRLGEEHTTWRGDVFHRGDAVFLETCAAYRKYQAPMGRLVYVGSAPAGAEKSAELAIKGMQAICAALKPGGKAGDAYAAWREVAASAGLHDYERHHCGYLVGIGFPPSWTGGSMVTSLFPGSERILEAGMVFHAHSWFTNTGVVDYFISNTVLLTENGAEILTNQTPETLMIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZV9</accession>
    <name>A0A0M6ZZV9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01206</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67084.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67084">
        <property type="protein sequence ID" value="CTQ67084"/>
        <property type="gene ID" value="LAX5112_01206"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67084.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="83" mass="9548" checksum="B0BA4D615306AB34" modified="2015-12-09" version="1">MTFRWHVMQIGRALSRLFNACTGGEGDTTTSAYVYRLAVVGGRKLGLPGRWWVAAVDWLLREPGHCKDAYHWHLTRDLFQDDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0H0</accession>
    <name>A0A0M7A0H0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">UDP-galactose-4-epimerase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01777</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the NAD(P)-dependent epimerase/dehydratase family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68538.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671662.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01777"/>
    <dbReference type="EnsemblBacteria" id="CTQ68538">
        <property type="protein sequence ID" value="CTQ68538"/>
        <property type="gene ID" value="LAX5112_01777"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001509">
        <property type="entry name" value="Epimerase_deHydtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01370">
        <property type="entry name" value="Epimerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Epimerase" evidence="2">
        <location>
            <begin position="3"/>
            <end position="291"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007637"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ68538.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="406" mass="45797" checksum="E2A5EA63394B6ED6" modified="2015-12-09" version="1">MKIAILGGDGFVGWPTSLHLSDKGHEVHIIDNLSRRWIDAELGVQSLTPMDSIQERTRIWKQETGNTIRFHLIDIAENYEVFKAWLAEERPDAIIHFAEQRAAPYSMKSDQHKNYTVTNNVNATHHLLNAMVELDLDAHLIHLGTMGVYGYSNVGAAIPEGYLSVDVETLSGATASQEILYPANPGSIYHMTKCLDQLLFQFYAKNDGLRITDLHQGIVWGTHTEQTLKHKQLINRFDYDGDYGTVLNRFLIQAAIDYPLTVHGTGGQTRAFIHIQDSVRCIELALDNPPERGDRVMVFNQMTETHRVRDLAELISKLTGAKIAYLPNPRKEAPENDLVVRNEQFLELGLNPIKLEDGLLSEVVDVAKAYAYRIDRSRVPAVSAWTKEIAADIERDPEHPRLKSVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0N6</accession>
    <name>A0A0M7A0N6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Putative cyclic di-GMP phosphodiesterase YliE</fullName>
            <ecNumber evidence="6">3.1.4.52</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">yliE_1</name>
        <name evidence="6" type="ORF">LAX5112_01590</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.4.52" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67972.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671373.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01590"/>
    <dbReference type="EnsemblBacteria" id="CTQ67972">
        <property type="protein sequence ID" value="CTQ67972"/>
        <property type="gene ID" value="LAX5112_01590"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071111">
        <property type="term" value="F:cyclic-guanylate-specific phosphodiesterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd01948">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.450">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000644">
        <property type="entry name" value="CBS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046342">
        <property type="entry name" value="CBS_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001633">
        <property type="entry name" value="EAL_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035919">
        <property type="entry name" value="EAL_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000160">
        <property type="entry name" value="GGDEF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00563">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00990">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00052">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00267">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141868">
        <property type="entry name" value="SSF141868"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54631">
        <property type="entry name" value="SSF54631"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00254">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51371">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50883">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50887">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0129">CBS domain</keyword>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="EAL" evidence="3">
        <location>
            <begin position="12"/>
            <end position="266"/>
        </location>
    </feature>
    <feature type="domain" description="CBS" evidence="5">
        <location>
            <begin position="283"/>
            <end position="344"/>
        </location>
    </feature>
    <feature type="domain" description="GGDEF" evidence="4">
        <location>
            <begin position="443"/>
            <end position="596"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00703"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51371"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ67972.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="598" mass="66278" checksum="FFC4E8B8F40F6607" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A174</accession>
    <name>A0A0M7A174_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">DUF6468 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_01674</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68206.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01674"/>
    <dbReference type="EnsemblBacteria" id="CTQ68206">
        <property type="protein sequence ID" value="CTQ68206"/>
        <property type="gene ID" value="LAX5112_01674"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045531">
        <property type="entry name" value="DUF6468"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20072">
        <property type="entry name" value="DUF6468"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="6"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="domain" description="DUF6468" evidence="3">
        <location>
            <begin position="35"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="109"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="119"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="156"/>
            <end position="189"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF20072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ68206.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="189" mass="20628" checksum="F9D931EE55790B7D" modified="2015-12-09" version="1">MTSMPIGLIIEALVAVLLVITIAYCWILNRRLQRLRADEQTLRATISELMTATEIAERAILGLKTTAAEADKSLGNRLKESETMSNTLADQIREGDKVFTRISQIAGVAKSSAPQREPVPAADPYPVQPQYTPAPQPAGHGAFEPVVPQSAPAVEQERRRPSRASDIRSAAEEATARLEQFRNKRKGAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A194</accession>
    <name>A0A0M7A194_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Bacterial SH3 domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01878</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68765.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ68765">
        <property type="protein sequence ID" value="CTQ68765"/>
        <property type="gene ID" value="LAX5112_01878"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="164"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="234"/>
            <end position="276"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="164"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="234"/>
            <end position="256"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68765.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="332" mass="35045" checksum="4E6CAE8E75DEEBDC" modified="2015-12-09" version="1">MVKVTAQTNSCEPQSEGTPDNATQETQDIKTTKTTANAATEDNQNDPSALAARILQLSADFETKMPLRPKKPALKGSDETPSDMPEVLTADPMDDWPPRPRRRRVSRALPVQYGPSFKTLAVSTVLLALAGTGAIALGLPDLMVGSDPDVVQVETQTITAVPKGDLTSSVSNTPSTGATRETPKTFTKAQDRIHQAFAETGINANTPTDELANRAMASLDQGAISRSVVNSETTAARQVSASGSTETASRSPLKSEPRQAAGTPLAPPVSNGETTGTITASVNLRATGTKNGKIIGIVPEGSEVSFNDCDKWWCEVVHDGKTGFVGQKFVDR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1S1</accession>
    <name>A0A0M7A1S1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">FMN reductase (NADH) RutF</fullName>
            <ecNumber evidence="2">1.5.1.42</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">rutF</name>
        <name evidence="2" type="ORF">LAX5112_01495</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.5.1.42" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67724.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671305.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01495"/>
    <dbReference type="EnsemblBacteria" id="CTQ67724">
        <property type="protein sequence ID" value="CTQ67724"/>
        <property type="gene ID" value="LAX5112_01495"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010181">
        <property type="term" value="F:FMN binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016646">
        <property type="term" value="F:oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002563">
        <property type="entry name" value="Flavin_Rdtase-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012349">
        <property type="entry name" value="Split_barrel_FMN-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01613">
        <property type="entry name" value="Flavin_Reduct"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00903">
        <property type="entry name" value="Flavin_Reduct"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Flavin_Reduct" evidence="1">
        <location>
            <begin position="25"/>
            <end position="172"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00903"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67724.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="175" mass="18530" checksum="1D9F662D2298E187" modified="2015-12-09" version="1">MATSTGIDPAAQSLTLDSQTFREAMSRIAAAVHIVTTDGDAGRAGGTVSAACSVSDDPASILICLNRQSRLHAAVLKNRCFCLNTLSDDHQEMSDVFAGRESADMSGRFAHGSWTNLATGCPALDTARLSIDCEIFSVSEVGTHSIVVGTVTDLRMTDPGKSLIYVRRGYKSLDT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A230</accession>
    <name>A0A0M7A230_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Glutathione S-transferase GstB</fullName>
            <ecNumber evidence="3">2.5.1.18</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">gstB_1</name>
        <name evidence="3" type="ORF">LAX5112_01705</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.5.1.18" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68350.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671474.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01705"/>
    <dbReference type="EnsemblBacteria" id="CTQ68350">
        <property type="protein sequence ID" value="CTQ68350"/>
        <property type="gene ID" value="LAX5112_01705"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004364">
        <property type="term" value="F:glutathione transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006749">
        <property type="term" value="P:glutathione metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010987">
        <property type="entry name" value="Glutathione-S-Trfase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036282">
        <property type="entry name" value="Glutathione-S-Trfase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004045">
        <property type="entry name" value="Glutathione_S-Trfase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02798">
        <property type="entry name" value="GST_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47616">
        <property type="entry name" value="SSF47616"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50405">
        <property type="entry name" value="GST_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50404">
        <property type="entry name" value="GST_NTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="GST N-terminal" evidence="1">
        <location>
            <begin position="1"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="domain" description="GST C-terminal" evidence="2">
        <location>
            <begin position="87"/>
            <end position="213"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50404"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50405"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ68350.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="213" mass="24964" checksum="A9CEFC6042738361" modified="2015-12-09" version="1">MLKVWGRKTSSNVQALMWCIGELGLEYERSDIGYSFGGTDTEAFRRLNPNQTIPVLQDANGQPIWETGAILRYLADRYGPESFWPEQTQDRAQVDMWAEWSKITIAMAFTAPVFWRVVRTPREAHDWNQIRRAVAALESKLEIAEQRLTNNPFLAGPAFTLADIQFGHILYRYYDIDIDRADLPRLKRYYHRLTERIAFREHVMVSYEDLRES</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A288</accession>
    <name>A0A0M7A288_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Flagellar motor switch protein FliN</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">fliN_2</name>
        <name evidence="3" type="ORF">LAX5112_01784</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the FliN/MopA/SpaO family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68556.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671510.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01784"/>
    <dbReference type="EnsemblBacteria" id="CTQ68556">
        <property type="protein sequence ID" value="CTQ68556"/>
        <property type="gene ID" value="LAX5112_01784"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009425">
        <property type="term" value="C:bacterial-type flagellum basal body"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003774">
        <property type="term" value="F:cytoskeletal motor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071973">
        <property type="term" value="P:bacterial-type flagellum-dependent cell motility"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006935">
        <property type="term" value="P:chemotaxis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.330.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001543">
        <property type="entry name" value="FliN-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001172">
        <property type="entry name" value="FliN_T3SS_HrcQb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036429">
        <property type="entry name" value="SpoA-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01052">
        <property type="entry name" value="FliMN_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00956">
        <property type="entry name" value="FLGMOTORFLIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101801">
        <property type="entry name" value="SSF101801"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0966">Cell projection</keyword>
    <keyword evidence="3" id="KW-0969">Cilium</keyword>
    <keyword evidence="3" id="KW-0282">Flagellum</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FliMN_C" evidence="2">
        <location>
            <begin position="5"/>
            <end position="73"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009226"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ68556.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="88" mass="9752" checksum="8A3447C8D1FA2F7B" modified="2015-12-09" version="1">MATFDEINVDISVVLGENHMPVHQLLRMGRGAVIDLDVDEDDDVKIYANNTLVAKGQVVLLGERIGISITEVLMRPPENRPMRTEGPL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2F1</accession>
    <name>A0A0M7A2F1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">braC_8</name>
        <name evidence="3" type="ORF">LAX5112_01879</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68767.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01879"/>
    <dbReference type="EnsemblBacteria" id="CTQ68767">
        <property type="protein sequence ID" value="CTQ68767"/>
        <property type="gene ID" value="LAX5112_01879"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028081">
        <property type="entry name" value="Leu-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13458">
        <property type="entry name" value="Peripla_BP_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809405" evidence="1">
        <location>
            <begin position="29"/>
            <end position="395"/>
        </location>
    </feature>
    <feature type="domain" description="Peripla_BP_6" evidence="2">
        <location>
            <begin position="34"/>
            <end position="364"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13458"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ68767.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="395" mass="43357" checksum="B3872F2EC41CDBE6" modified="2015-12-09" version="1">MMNMRVRFKHLAGAVLCSALMAVSPGYAQNPPKLTVGFMATLSGPAAIYGEHMRDGFMLAVNQSNGALGGLETNVLITDDKLDPDYAVEKVTELIEVNGIDVLVGVNFSRVMLAVHDPVVRSRTLFIGTSSGPAPIAGRTCSRYFYSTASQDDQVHETMGRFASLKGYQRVVTIAPDYEAARDALAAFQRHFKGQIARELFPRLGQTDFSGEFAQIDEISPDAIYAFMPSGMGVELVRQFHTSGLKGAIPFLSAKTINGVSLPYMAETAEGLMSASTWAPNLDNPANKRFMREFQRTYGYQPSVYAAQGYDAAKFLHFSLELTGGIKDTETLISAMNAAPFESVRGDFRFNDNQFPIQDFYLVEGVRRTSTLYEMEATARIFDDVGDAYSGSCRM</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2P7</accession>
    <name>A0A0M7A2P7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="12">Lipid A export ATP-binding/permease protein MsbA</fullName>
            <ecNumber evidence="12">3.6.3.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">msbA_1</name>
        <name evidence="12" type="ORF">LAX5112_01910</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.-" evidence="12"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68851.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671603.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01910"/>
    <dbReference type="EnsemblBacteria" id="CTQ68851">
        <property type="protein sequence ID" value="CTQ68851"/>
        <property type="gene ID" value="LAX5112_01910"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045454">
        <property type="term" value="P:cell redox homeostasis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034775">
        <property type="term" value="P:glutathione transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1560.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011527">
        <property type="entry name" value="ABC1_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036640">
        <property type="entry name" value="ABC1_TM_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014223">
        <property type="entry name" value="ABC_CydC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90123">
        <property type="entry name" value="SSF90123"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02868">
        <property type="entry name" value="CydC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50929">
        <property type="entry name" value="ABC_TM1F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7 12" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="12" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="3 7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 9" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="21"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="49"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="130"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="158"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="249"/>
            <end position="269"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="275"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="11">
        <location>
            <begin position="17"/>
            <end position="303"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="10">
        <location>
            <begin position="343"/>
            <end position="561"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="317"/>
            <end position="338"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="377"/>
            <end position="384"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ68851.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="561" mass="59729" checksum="5AB8AB4FECF4389D" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2U3</accession>
    <name>A0A0M7A2U3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">DNA alkylation repair enzyme</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01937</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68927.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671627.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ68927">
        <property type="protein sequence ID" value="CTQ68927"/>
        <property type="gene ID" value="LAX5112_01937"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014825">
        <property type="entry name" value="DNA_alkylation"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08713">
        <property type="entry name" value="DNA_alkylation"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="SSF48371"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ68927.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="239" mass="27049" checksum="ECA3E17B1EF302B6" modified="2015-12-09" version="1">MSRRPKPSGEDWSLDRVLDTLTALGSEENRAGMARFGIDTSRAFGVPMAELRPLARRIGKQESLADELWTSGYHEARLLAILIISPVNLTDARALHWLSEIRSWDHCDQLTNVLARREGSDALIASLAANEKEFLRRAAFALIAWRAVHAKKSPDTEFLSYLPLIRTAASDPRNFVWKAVHWALRQIGKRSTSLHGPALKLAEELFEDQNKTVRRVGREAFRELNSDKVRQRLSIGKTE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A321</accession>
    <name>A0A0M7A321_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Pseudouridine-5'-phosphate glycosidase</fullName>
            <shortName evidence="6">PsiMP glycosidase</shortName>
            <ecNumber evidence="6">4.2.1.70</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6 7" type="primary">psuG</name>
        <name evidence="7" type="ORF">LAX5112_01644</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Catalyzes the reversible cleavage of pseudouridine 5'-phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>D-ribose 5-phosphate + uracil = H2O + psi-UMP</text>
            <dbReference type="Rhea" id="RHEA:18337"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:17568"/>
            <dbReference type="ChEBI" id="CHEBI:58380"/>
            <dbReference type="ChEBI" id="CHEBI:78346"/>
            <dbReference type="EC" id="4.2.1.70"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
        <text evidence="6">Binds 1 Mn(2+) ion per subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Homotrimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the pseudouridine-5'-phosphate glycosidase family.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.70" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68123.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01644"/>
    <dbReference type="EnsemblBacteria" id="CTQ68123">
        <property type="protein sequence ID" value="CTQ68123"/>
        <property type="gene ID" value="LAX5112_01644"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016798">
        <property type="term" value="F:hydrolase activity, acting on glycosyl bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004730">
        <property type="term" value="F:pseudouridylate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046113">
        <property type="term" value="P:nucleobase catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1790.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01876">
        <property type="entry name" value="PsiMP_glycosidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022830">
        <property type="entry name" value="Indigdn_synthA-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007342">
        <property type="entry name" value="PsuG"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42909">
        <property type="entry name" value="PTHR42909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04227">
        <property type="entry name" value="Indigoidine_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF110581">
        <property type="entry name" value="SSF110581"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6 7" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="2 6 7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4 6" id="KW-0456">Lyase</keyword>
    <keyword evidence="3 6" id="KW-0464">Manganese</keyword>
    <keyword evidence="1 6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Substrate binding" evidence="6">
        <location>
            <begin position="149"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="6">
        <location>
            <position position="34"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="6">
        <location>
            <position position="168"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="95"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="115"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="147"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01876"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ68123.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="310" mass="32734" checksum="DA4EC9F6A5A10B0D" modified="2015-12-09" version="1">MTHPTQSAALKSLIVYSDEVRDALAANKPLVALESTIITHGMPFPRNVETARQVEADIRENGAVPATIAIMDGKIHVGLSDAELDRLAQAEDVIKCSRADLTFALATGRYGATTVAATMMAAHAASIKVFATGGIGGVHKGAEQSFDISADLDELARTPVCVVCAGAKALLDIPKTLEVLETKGVPVVAYGTDELPAFWSRESGLSAPYRLDTPNEIGVLLKVRENFADHGGVLITNPVPETDEIPRDEMSGFIDAAIKTAAEQNVTGKGVTPFVLGNILELTDGRSLDTNIALVRNNARLAARIAAELV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3Y5</accession>
    <name>A0A0M7A3Y5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Tellurite resistance protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02174</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69589.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008190957.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02174"/>
    <dbReference type="EnsemblBacteria" id="CTQ69589">
        <property type="protein sequence ID" value="CTQ69589"/>
        <property type="gene ID" value="LAX5112_02174"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3680.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007791">
        <property type="entry name" value="DjlA_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029024">
        <property type="entry name" value="TerB-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05099">
        <property type="entry name" value="TerB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF158682">
        <property type="entry name" value="SSF158682"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TerB" evidence="1">
        <location>
            <begin position="28"/>
            <end position="144"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF05099"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69589.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="157" mass="17876" checksum="3897B22CCD6D0DDA" modified="2015-12-09" version="1">MLNALKSFVREITFGDTGKKTFAEDDKRLAAAALLFHLVDIDGIIEDSESEKLRQILQARYELTDEETSELISAAKQRDEEAVDLYGFTSVLKRTTDEAERLAIIEMMWEIVYADGHVHEFEDNTIWRVAELLGVSSRDRMTLRHKVAKTAPEADEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3Z8</accession>
    <name>A0A0M7A3Z8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Putative pterin-4-alpha-carbinolamine dehydratase</fullName>
            <shortName evidence="4">PHS</shortName>
            <ecNumber evidence="4">4.2.1.96</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">4-alpha-hydroxy-tetrahydropterin dehydratase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="4">Pterin carbinolamine dehydratase</fullName>
            <shortName evidence="4">PCD</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5" type="primary">phhB</name>
        <name evidence="5" type="ORF">LAX5112_02245</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 4">
            <text>(4aS,6R)-4a-hydroxy-L-erythro-5,6,7,8-tetrahydrobiopterin = (6R)-L-erythro-6,7-dihydrobiopterin + H2O</text>
            <dbReference type="Rhea" id="RHEA:11920"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15642"/>
            <dbReference type="ChEBI" id="CHEBI:43120"/>
            <dbReference type="EC" id="4.2.1.96"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2 4">Belongs to the pterin-4-alpha-carbinolamine dehydratase family.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.96" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69778.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671873.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02245"/>
    <dbReference type="EnsemblBacteria" id="CTQ69778">
        <property type="protein sequence ID" value="CTQ69778"/>
        <property type="gene ID" value="LAX5112_02245"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008124">
        <property type="term" value="F:4-alpha-hydroxytetrahydrobiopterin dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006729">
        <property type="term" value="P:tetrahydrobiopterin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1360.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00434">
        <property type="entry name" value="Pterin_4_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036428">
        <property type="entry name" value="PCD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001533">
        <property type="entry name" value="Pterin_deHydtase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12599">
        <property type="entry name" value="PTHR12599"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01329">
        <property type="entry name" value="Pterin_4a"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55248">
        <property type="entry name" value="SSF55248"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 5" id="KW-0456">Lyase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001554"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006472"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ69778.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="97" mass="10605" checksum="27155FFC34404CE5" modified="2015-12-09" version="1">MVEKLTPEERAAGLDSLGNWQLVSGRDAITATFKFGDFLEAFGFMTQVALAAEKMNHHPEWSNVYNSVEITLATHDVGGLSALDLKLAKKIDQIVGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A481</accession>
    <name>A0A0M7A481_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Acetyl-CoA acetyltransferase</fullName>
            <ecNumber evidence="7">2.3.1.9</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">phbA</name>
        <name evidence="7" type="ORF">LAX5112_02063</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the thiolase-like superfamily. Thiolase family.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.9" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69302.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008192106.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02063"/>
    <dbReference type="EnsemblBacteria" id="CTQ69302">
        <property type="protein sequence ID" value="CTQ69302"/>
        <property type="gene ID" value="LAX5112_02063"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003985">
        <property type="term" value="F:acetyl-CoA C-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd00751">
        <property type="entry name" value="thiolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.47.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002155">
        <property type="entry name" value="Thiolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016039">
        <property type="entry name" value="Thiolase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020615">
        <property type="entry name" value="Thiolase_acyl_enz_int_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020610">
        <property type="entry name" value="Thiolase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020617">
        <property type="entry name" value="Thiolase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020613">
        <property type="entry name" value="Thiolase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020616">
        <property type="entry name" value="Thiolase_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02803">
        <property type="entry name" value="Thiolase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00108">
        <property type="entry name" value="Thiolase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000429">
        <property type="entry name" value="Ac-CoA_Ac_transf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53901">
        <property type="entry name" value="SSF53901"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01930">
        <property type="entry name" value="AcCoA-C-Actrans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00098">
        <property type="entry name" value="THIOLASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00737">
        <property type="entry name" value="THIOLASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00099">
        <property type="entry name" value="THIOLASE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4 7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Thiolase_N" evidence="5">
        <location>
            <begin position="7"/>
            <end position="263"/>
        </location>
    </feature>
    <feature type="domain" description="Thiolase_C" evidence="6">
        <location>
            <begin position="271"/>
            <end position="393"/>
        </location>
    </feature>
    <feature type="active site" description="Acyl-thioester intermediate" evidence="3">
        <location>
            <position position="91"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="3">
        <location>
            <position position="350"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="3">
        <location>
            <position position="380"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR000429-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003557"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00108"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF02803"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ69302.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="393" mass="41123" checksum="ECA4AA60B5CA08AA" modified="2015-12-09" version="1">MSASTDVVIVSATRTPVGSFNGSFANTPAHELGAHVIKAALEQAKVDGADVDEVVFGQVLTAGQGQNPARQAAIAAGIPDGATAWGLNQVCGSGLRTVAIAAQQIQTGDATVMIAGGQENMTQSPHCAPMRAGYKMGDYKMVDTMIKDGLWDAFNGYHMGQTAENVAEKWQITREQQDEFAVASQNKAEAAQKAGKFKDEITPFTVKTRKGDIVVEDDEYIRHGATMEAMQKLRPAFNKEGTVTAANASGINDGAAALVVMSAEEAEKRGLKPLARIASWATAGVDPTIMGSGPIPASRKALEKAGWSAEELDLVEANEAFAAQACAVNKDMGWNPDIVNVNGGAIAIGHPIGASGARILCTLLHEMVRRDAKKGLATLCIGGGMGVAMCLER</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A489</accession>
    <name>A0A0M7A489_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6 7">Octanoyltransferase</fullName>
            <ecNumber evidence="6 7">2.3.1.181</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Lipoate-protein ligase B</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">Lipoyl/octanoyl transferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6 12" type="primary">lipB</name>
        <name evidence="12" type="ORF">LAX5112_01783</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5 6 7">Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 6 7">
            <text>L-lysyl-[protein] + octanoyl-[ACP] = H(+) + holo-[ACP] + N(6)-octanoyl-L-lysyl-[protein]</text>
            <dbReference type="Rhea" id="RHEA:17665"/>
            <dbReference type="Rhea" id="RHEA-COMP:9636"/>
            <dbReference type="Rhea" id="RHEA-COMP:9685"/>
            <dbReference type="Rhea" id="RHEA-COMP:9752"/>
            <dbReference type="Rhea" id="RHEA-COMP:9928"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29969"/>
            <dbReference type="ChEBI" id="CHEBI:64479"/>
            <dbReference type="ChEBI" id="CHEBI:78463"/>
            <dbReference type="ChEBI" id="CHEBI:78809"/>
            <dbReference type="EC" id="2.3.1.181"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 6 7">Protein modification; protein lipoylation via endogenous pathway; protein N(6)-(lipoyl)lysine from octanoyl-[acyl-carrier-protein]: step 1/2.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="miscellaneous">
        <text evidence="6">In the reaction, the free carboxyl group of octanoic acid is attached via an amide linkage to the epsilon-amino group of a specific lysine residue of lipoyl domains of lipoate-dependent enzymes.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6 7">Belongs to the LipB family.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.181" evidence="6 7"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68553.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671509.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01783"/>
    <dbReference type="EnsemblBacteria" id="CTQ68553">
        <property type="protein sequence ID" value="CTQ68553"/>
        <property type="gene ID" value="LAX5112_01783"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00538">
        <property type="reaction ID" value="UER00592"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033819">
        <property type="term" value="F:lipoyl(octanoyl) transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009249">
        <property type="term" value="P:protein lipoylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd16444">
        <property type="entry name" value="LipB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.930.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00013">
        <property type="entry name" value="LipB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045864">
        <property type="entry name" value="aa-tRNA-synth_II/BPL/LPL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004143">
        <property type="entry name" value="BPL_LPL_catalytic"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000544">
        <property type="entry name" value="Octanoyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020605">
        <property type="entry name" value="Octanoyltransferase_CS"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF016262">
        <property type="entry name" value="LPLase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55681">
        <property type="entry name" value="SSF55681"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00214">
        <property type="entry name" value="lipB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51733">
        <property type="entry name" value="BPL_LPL_CATALYTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01313">
        <property type="entry name" value="LIPB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6 7" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6 7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="BPL/LPL catalytic" evidence="11">
        <location>
            <begin position="50"/>
            <end position="233"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="6 9">
        <location>
            <begin position="89"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="6 9">
        <location>
            <begin position="164"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="6 9">
        <location>
            <begin position="177"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="active site" description="Acyl-thioester intermediate" evidence="6 8">
        <location>
            <position position="195"/>
        </location>
    </feature>
    <feature type="site" description="Lowers pKa of active site Cys" evidence="6 10">
        <location>
            <position position="161"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000953"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00024732"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00013"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRNR" id="PIRNR016262"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR016262-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR016262-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR016262-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS51733"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ68553.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="235" mass="26649" checksum="4EA93A6088F06560" modified="2015-12-09" version="1">MSPDLRDALNFSFLPETGSAPVEWRISDDLVDYEAASQEMDERVKRIIAGEANEQVWLLEHPPIYTAGPRADDQDLIAPDRFPVYRTGRGGQHTYHGPGQRVAYVMLDLKRRKQDVRAFVSALEAWLINTLWHYHIRGERREDRVGVWVRRPDRGANVEDKIAAIGIRMRKWVTFHGISFNVEPELDHFSGIVPCGVSEHGVTSLVDLGIPVTMAENDSVLRAEFEKIFGPTTTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4N1</accession>
    <name>A0A0M7A4N1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">HIT-like protein</fullName>
            <ecNumber evidence="3">3.-.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01843</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.-.-.-" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68683.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01843"/>
    <dbReference type="EnsemblBacteria" id="CTQ68683">
        <property type="protein sequence ID" value="CTQ68683"/>
        <property type="gene ID" value="LAX5112_01843"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01277">
        <property type="entry name" value="HINT_subgroup"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.428.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039384">
        <property type="entry name" value="HINT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001310">
        <property type="entry name" value="Histidine_triad_HIT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011146">
        <property type="entry name" value="HIT-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036265">
        <property type="entry name" value="HIT-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23089">
        <property type="entry name" value="PTHR23089"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01230">
        <property type="entry name" value="HIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00332">
        <property type="entry name" value="HISTRIAD"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54197">
        <property type="entry name" value="SSF54197"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51084">
        <property type="entry name" value="HIT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HIT" evidence="2">
        <location>
            <begin position="13"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="Histidine triad motif" evidence="1">
        <location>
            <begin position="105"/>
            <end position="109"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51084"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ68683.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="144" mass="15781" checksum="7BEDFEC84F040CED" modified="2015-12-09" version="1">MPIETPAYDDQNIFAKIMRGELPSHKVYEDDKTVVIMDIMPRGDGHVLVIPKAPSRNILDIAQEDLNAVMATVQKMAHAVIKAFGADGTTIQQFSEPAGGQVVFHTHVHIIPRFDGVKMKPHTGEMADNDLLAEQADKIRAALG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A588</accession>
    <name>A0A0M7A588_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02193</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69642.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671834.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02193"/>
    <dbReference type="EnsemblBacteria" id="CTQ69642">
        <property type="protein sequence ID" value="CTQ69642"/>
        <property type="gene ID" value="LAX5112_02193"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016702">
        <property type="term" value="F:oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.130.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015889">
        <property type="entry name" value="Intradiol_dOase_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006311">
        <property type="entry name" value="TAT_signal"/>
    </dbReference>
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    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ69642.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="161" mass="16898" checksum="C59B1F57292FC99D" modified="2015-12-09" version="1">MAANFSRRTVLAAGGAALVIGASGLIVPAQAKGVAPTPSMRGGANNYRPGAPIVDRIGSGGFWMTGTVRRAGDGAPLAGQRIQIWAHTTEGHERDPESHGATLTDENGVFRLEMPQIVPAFGQPHGHLAHDSGDFETVFLRPVMPSSQDKSLEAHFVLKPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5G0</accession>
    <name>A0A0M7A5G0_9HYPH</name>
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        <submittedName>
            <fullName evidence="7">Enterobactin exporter EntS</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_02129</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
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    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69480.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
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    <dbReference type="EnsemblBacteria" id="CTQ69480">
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    </dbReference>
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        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="project" value="InterPro"/>
    </dbReference>
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    </dbReference>
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        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
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        <property type="entry name" value="TM_effector"/>
    </dbReference>
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    </dbReference>
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    </dbReference>
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        <location>
            <begin position="21"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
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            <end position="79"/>
        </location>
    </feature>
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            <end position="173"/>
        </location>
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            <end position="250"/>
        </location>
    </feature>
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            <end position="376"/>
        </location>
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        </location>
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            <begin position="21"/>
            <end position="407"/>
        </location>
    </feature>
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            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
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        <source>
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        </source>
    </evidence>
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        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="EMBL" id="CTQ69480.1"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="538" mass="57401" checksum="2337C1D16C9389DA" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5K2</accession>
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            <fullName evidence="3">3-mercaptopyruvate sulfurtransferase</fullName>
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        </submittedName>
    </protein>
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        <name evidence="3" type="primary">sseA_2</name>
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        <name type="scientific">Roseibium alexandrii</name>
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        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.8.1.2" evidence="3"/>
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        <property type="protein sequence ID" value="CTQ68904.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01929"/>
    <dbReference type="EnsemblBacteria" id="CTQ68904">
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        <property type="gene ID" value="LAX5112_01929"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
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        <property type="term" value="F:3-mercaptopyruvate sulfurtransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
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    </dbReference>
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    </dbReference>
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        <property type="entry name" value="Rhodanese-like_dom_sf"/>
    </dbReference>
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        <property type="match status" value="2"/>
    </dbReference>
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        <property type="match status" value="2"/>
    </dbReference>
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    </dbReference>
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    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0670">Pyruvate</keyword>
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    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809247" evidence="1">
        <location>
            <begin position="30"/>
            <end position="318"/>
        </location>
    </feature>
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        <location>
            <begin position="48"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="domain" description="Rhodanese" evidence="2">
        <location>
            <begin position="196"/>
            <end position="311"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50206"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ68904.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="318" mass="34309" checksum="BD214D38DD5A1600" modified="2015-12-09" version="1">MTRLHLGTKAIVAAACAVLLQMTVLSSDAQALKASPLVSVDWLETNQDDDNLLILDIRSPLAKSGKDDYLKGHIPGAVWSEYPGFWRTSRGNVTGVLPSIEKLEASLSELGVHEDRTVVLVPAGTSHLDFGAATRIYWTFKYLGHDNVAILDGGHNAWVKAGKPLESGNVVPEGDMFIAEPRPELLVSTDDVASLLGGDAILLDGRPLAQFEGAEKHKDATRFGHLPGATHFDQAKFYDTESNQLKSREALASLAQDAVSGSDTPVVSYCNTGHWAATNWFVLSELLGQENVAVYDDSMVGWSQQKDLPISSPKTATN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6I3</accession>
    <name>A0A0M7A6I3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02343</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
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    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
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            <strain evidence="2">CECT 5112</strain>
        </source>
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    <dbReference type="STRING" id="388408.LAX5112_02343"/>
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    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
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    </dbReference>
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        <property type="entry name" value="DUF6101"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19596">
        <property type="entry name" value="DUF6101"/>
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    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ70072.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="196" mass="21490" checksum="B8BE3B2B48A7CABB" modified="2015-12-09" version="1">MKRQTENQMTQAAGIGTEQVLHPGCLPVQFQQRLEARPGTTSLPADIFLDREKAIIKRRVGGLPVTIVVPMHGFDGVMVRIVPGNTPGEILASLILKHPDSALSITLVETHSSDELATHWSRWAQVLSLPMLVCDLGGAVKPIEAFQANPAAAPAPRRKLRLLTGRRPRFLNRRQTGSLGKVSSSYAHEREIIARD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A761</accession>
    <name>A0A0M7A761_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Bacteriophytochrome cph2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">cph2_12</name>
        <name evidence="5" type="ORF">LAX5112_02587</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
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        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
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        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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    <dbReference type="EnsemblBacteria" id="CTQ70719">
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        <property type="gene ID" value="LAX5112_02587"/>
    </dbReference>
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    </dbReference>
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        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01948">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01949">
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.450">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.270">
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="EAL_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035919">
        <property type="entry name" value="EAL_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000160">
        <property type="entry name" value="GGDEF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00563">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00990">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00052">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00267">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141868">
        <property type="entry name" value="SSF141868"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00254">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50883">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50887">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="190"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="domain" description="GGDEF" evidence="4">
        <location>
            <begin position="261"/>
            <end position="393"/>
        </location>
    </feature>
    <feature type="domain" description="EAL" evidence="3">
        <location>
            <begin position="402"/>
            <end position="653"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="659"/>
            <end position="714"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="662"/>
            <end position="676"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ70719.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="714" mass="77763" checksum="2AC78CE440F0498D" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7N1</accession>
    <name>A0A0M7A7N1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative N-acetyltransferase YsnE</fullName>
            <ecNumber evidence="2">2.3.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ysnE</name>
        <name evidence="2" type="ORF">LAX5112_02639</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.3.1.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70879.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672212.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02639"/>
    <dbReference type="EnsemblBacteria" id="CTQ70879">
        <property type="protein sequence ID" value="CTQ70879"/>
        <property type="gene ID" value="LAX5112_02639"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="17"/>
            <end position="156"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70879.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="158" mass="17237" checksum="FDA8494675EC8268" modified="2015-12-09" version="1">MSSAPAISIAVETPLSDEMRVMVGELNDLLLSLTSEDACHHLTVEQMADARTTVFVARVDGKLAACGSLYRHKGSVAEVKRMYTRPAYQSLGLGRKLLDRILALAIEEGFSEAALETGVNYAAAKHLYETSGFEVCGPILDYPEHPESLFYSRRLTAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7U7</accession>
    <name>A0A0M7A7U7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02461</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70310.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008195875.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02461"/>
    <dbReference type="EnsemblBacteria" id="CTQ70310">
        <property type="protein sequence ID" value="CTQ70310"/>
        <property type="gene ID" value="LAX5112_02461"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ70310.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="220" mass="24615" checksum="821057794FD4FC44" modified="2015-12-09" version="1">MSASRSDEPPRAWQRMLSGRRLNLLDPSPLDVEISDIAHGLARVARWNGQTYGDHAFSVAEHSLIVEDIALSLKPDISPDWRLAILLHDAPEYVIGDMISPFKTVIGEAYKAVEHRLQGAIHLRFGLPAEMPQTIKKLCKRADIICAYFEAVELAGFEDKEAAKIFGRPRGYPADEDGKLRYGLKPLPVAKAEILFMERFELIEALREAGKKPKTGRASR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8I8</accession>
    <name>A0A0M7A8I8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">D-3-phosphoglycerate dehydrogenase</fullName>
            <ecNumber evidence="6">1.1.1.399</ecNumber>
            <ecNumber evidence="7">1.1.1.95</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="11">2-oxoglutarate reductase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="14" type="primary">serA_1</name>
        <name evidence="14" type="ORF">LAX5112_02657</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Catalyzes the reversible oxidation of 3-phospho-D-glycerate to 3-phosphonooxypyruvate, the first step of the phosphorylated L-serine biosynthesis pathway. Also catalyzes the reversible oxidation of 2-hydroxyglutarate to 2-oxoglutarate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>(2R)-3-phosphoglycerate + NAD(+) = 3-phosphooxypyruvate + H(+) + NADH</text>
            <dbReference type="Rhea" id="RHEA:12641"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:18110"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:58272"/>
            <dbReference type="EC" id="1.1.1.95"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>(R)-2-hydroxyglutarate + NAD(+) = 2-oxoglutarate + H(+) + NADH</text>
            <dbReference type="Rhea" id="RHEA:49612"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15801"/>
            <dbReference type="ChEBI" id="CHEBI:16810"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="EC" id="1.1.1.399"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="4">Amino-acid biosynthesis; L-serine biosynthesis; L-serine from 3-phospho-D-glycerate: step 1/3.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5 12">Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.399" evidence="6"/>
    <dbReference type="EC" id="1.1.1.95" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70931.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672228.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02657"/>
    <dbReference type="EnsemblBacteria" id="CTQ70931">
        <property type="protein sequence ID" value="CTQ70931"/>
        <property type="gene ID" value="LAX5112_02657"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00135">
        <property type="reaction ID" value="UER00196"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004617">
        <property type="term" value="F:phosphoglycerate dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006564">
        <property type="term" value="P:L-serine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045865">
        <property type="entry name" value="ACT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002912">
        <property type="entry name" value="ACT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006139">
        <property type="entry name" value="D-isomer_2_OHA_DH_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029753">
        <property type="entry name" value="D-isomer_DH_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029752">
        <property type="entry name" value="D-isomer_DH_CS1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006140">
        <property type="entry name" value="D-isomer_DH_NAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00389">
        <property type="entry name" value="2-Hacid_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02826">
        <property type="entry name" value="2-Hacid_dh_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55021">
        <property type="entry name" value="SSF55021"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51671">
        <property type="entry name" value="ACT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00065">
        <property type="entry name" value="D_2_HYDROXYACID_DH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00670">
        <property type="entry name" value="D_2_HYDROXYACID_DH_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00671">
        <property type="entry name" value="D_2_HYDROXYACID_DH_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="9 12 14" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10" id="KW-0718">Serine biosynthesis</keyword>
    <feature type="domain" description="ACT" evidence="13">
        <location>
            <begin position="341"/>
            <end position="414"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000646"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001878"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00003800"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00005216"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00005854"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00013001"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00013143"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00021582"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023299"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00030455"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU003719"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS51671"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="CTQ70931.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="414" mass="44834" checksum="C77F10004A5CAB3D" modified="2015-12-09" version="1">MIHGLSRPKNQIRWLLLEGISPTAHAILEKNGYTNVEVLSGALEKDALIEKLQDVQMLGIRSRTQVTEEVLESAKSLVAVGCFSVGTNQVDLGGTLTRGIPVFNAPFSNTRSVAELTIAEIVMLMRGVFPKSSGAHEGRWMKTAAGSHEVRGKTLGIIGYGNIGTQLSNLAEAMGLRVIYYDTIDKLQHGNVMPSDSMDALLAESDVVSLHVPDTPGTRNMFGADQIAKMKKGAFLINNARGKVVDIDALAAALKSGHLAGAAVDVFPVEPKSNKDEFISPLRGLDNVILTPHVGGSTEEAQARIGEEVSKRLVEYSDVGSTIGAVSFPQVQLPKGTEATRFIQVHHNAPGAMRTLNDLFTRHDLNIHAQYMQSHLDIGYVVMDVDSPVQDPVKILEEIRALPNTIRARLLNRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8L3</accession>
    <name>A0A0M7A8L3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02306</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ69974.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ69974">
        <property type="protein sequence ID" value="CTQ69974"/>
        <property type="gene ID" value="LAX5112_02306"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ69974.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="340" mass="37669" checksum="4DF56106CCF99512" modified="2015-12-09" version="1">MVCRALGMTVQDDNTLKLITAKNRLFGTIDLTTQAVDSNYKNNLTLKVGQIPSTYFFSSALFENTSTRYRPFHPQGFIATSSEMRMYWVLAGYWNTIGNLYSAISTDFAPIAPSLPDTKAPIPAFYESRFFVYAPIGVDKTGVEASIRMMQKQATPLSTDALVTMNRDDKGGDKTAVYYINDGALQGMYWASKQGGWNSGSGQNTNRLFPFEIIDYPIPETAFPEAAARGSDFPEALKVVPANNHVHFGHSLMTIEAIEAYYKDPNMLVGLNNVITGADLWTRMLRLGAYTQSLGYSANTRPFGAQRIQSGTNYLSLTEAGDLNRQKQLVTELIANFVDN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8W3</accession>
    <name>A0A0M7A8W3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Alkylhydroperoxidase AhpD family core domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02861</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71548.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672382.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02861"/>
    <dbReference type="EnsemblBacteria" id="CTQ71548">
        <property type="protein sequence ID" value="CTQ71548"/>
        <property type="gene ID" value="LAX5112_02861"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004601">
        <property type="term" value="F:peroxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051920">
        <property type="term" value="F:peroxiredoxin activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1290.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029032">
        <property type="entry name" value="AhpD-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004675">
        <property type="entry name" value="AhpD_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003779">
        <property type="entry name" value="CMD-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02627">
        <property type="entry name" value="CMD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69118">
        <property type="entry name" value="SSF69118"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00778">
        <property type="entry name" value="ahpD_dom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-0575">Peroxidase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CMD" evidence="1">
        <location>
            <begin position="26"/>
            <end position="107"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02627"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71548.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="124" mass="12945" checksum="AF55EA4E75DE3003" modified="2015-12-09" version="1">MSVSDWQSFISQTDKRMADLRSGIPGVTKGFHDVARSAISPGALDSKTKELIALAIGIAARCDGCLAYHSKAAAKYGASREEIMETIGVAVYMGGGPSMIYGAEALAAFDAFSGHDASEAQDPK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A929</accession>
    <name>A0A0M7A929_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Gcv operon activator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">gcvA_11</name>
        <name evidence="3" type="ORF">LAX5112_02648</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70906.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672219.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02648"/>
    <dbReference type="EnsemblBacteria" id="CTQ70906">
        <property type="protein sequence ID" value="CTQ70906"/>
        <property type="gene ID" value="LAX5112_02648"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00039">
        <property type="entry name" value="HTHLYSR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="5"/>
            <end position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ70906.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="299" mass="32825" checksum="8D94476C0DA6738C" modified="2015-12-09" version="1">MDRLPPPRLLRVFEIVDRMGGVKRAAQELNVSLPAVSQALRHLENHIGTSLFDRSTRPASLTEAGQILLKAVQDNRERLVEALTDIQALESAANTVTVACTMGFATYWLMPRLEAFYRDHPDIVVNVQTIPHEVPALGPGTDIAMRYGDGSWTDGTVHLLFEERVEPVCAPGLAARISEEGGSLASAFLIHVEVADKRWISWPQYFFRTSQKANGSAKGLRFSNYVQATQAALSGHGIMLGWRSITGDQVAKGLLVPVSLPAYRPPDAYYAVLSGRSKNAETADVVVNWLKHTAHTETL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A966</accession>
    <name>A0A0M7A966_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Putative ATPase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02739</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71161.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672288.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02739"/>
    <dbReference type="EnsemblBacteria" id="CTQ71161">
        <property type="protein sequence ID" value="CTQ71161"/>
        <property type="gene ID" value="LAX5112_02739"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007413">
        <property type="entry name" value="DUF463_YcjX"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38605">
        <property type="entry name" value="PTHR38605"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04317">
        <property type="entry name" value="DUF463"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF019381">
        <property type="entry name" value="YcjX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ71161.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="499" mass="55026" checksum="291DAC2A612572E1" modified="2015-12-09" version="1">MTSLTNLAEEARLTLANLTDAATDLAVPSLRLGVTGLARAGKTVFLTSLVHNLVHGGRLPVFSAAAGQRMTGARLQPQPDDAVPRFDYESHVQALVKDRIWPQSTRQVSELRLTIDYESASYVYRKLGPGRLHLDLIDYPGEWLLDLPLLDKDYATFSAEAVARARKEHRSSIAGPYLEALTEAAAKADAPEDEQTAQKLSAAFKSYLSACRADAHALSMLPPGRFLMPGDLDGSPALTFAPLDIAPDAPPARTGTLRAMMERRYEAYKTHVIRPFFRNHFARLDRQIVLVDVLQALNAGPHAMLDLEIALSEVLSAFRPGRRSWLSSILSRRIDRILFAATKADHVHRTDHDRLEAITHRLVGRAADRALFKGAEVDVLALAAVRATREASVRHKGQKLPAILGTPLPGEKIDGETYDGNTEIAMFPGDLPENPNMLFEDIESISQNTGQTPHQTDLSLQFMRFRPPKLDTTAEGLTLSLPHIRLDRALEFLLGDRLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9A3</accession>
    <name>A0A0M7A9A3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">NAD(+) diphosphatase</fullName>
            <ecNumber evidence="2">3.6.1.22</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">nudC</name>
        <name evidence="8" type="ORF">LAX5112_02826</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <dbReference type="EC" id="3.6.1.22" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71449.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672358.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02826"/>
    <dbReference type="EnsemblBacteria" id="CTQ71449">
        <property type="protein sequence ID" value="CTQ71449"/>
        <property type="gene ID" value="LAX5112_02826"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000210">
        <property type="term" value="F:NAD+ diphosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015375">
        <property type="entry name" value="NADH_PPase-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015797">
        <property type="entry name" value="NUDIX_hydrolase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000086">
        <property type="entry name" value="NUDIX_hydrolase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015376">
        <property type="entry name" value="Znr_NADH_PPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00293">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09296">
        <property type="entry name" value="NUDIX-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09297">
        <property type="entry name" value="zf-NADH-PPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55811">
        <property type="entry name" value="SSF55811"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51462">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-0460">Magnesium</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0520">NAD</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nudix hydrolase" evidence="7">
        <location>
            <begin position="175"/>
            <end position="300"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012381"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51462"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ71449.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="315" mass="35142" checksum="C392BAEFD97904E7" modified="2015-12-09" version="1">MRAPDADLPAMEMSFLGNTLDRQSTRRGDRAYLSELLDRPDTEIVLSTPRTLVFPAGSPPQFGHTLESALSLSASREEMVFLGLRPETGRAVFATTLGQQDEELAEMPSLHLQDLRQLAIQRTFPPEELGALAQARALIHWHRTHRHCSQCGEKTVMSEAGYRRDCLSCGAHHFPRTDPCVIMLITDGDRALLGRPPRLPEGIYTTLAGFMEPGETIEQAVRRETLEESSIEVGEVRLISNQPWPFPANLMLGCIGDALSTDIIIEDDELEACKWCSRDEVRQMIEGTHPEGHMIPPSISIAYELITGWLEETTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9D0</accession>
    <name>A0A0M7A9D0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative cysteine protease YraA</fullName>
            <ecNumber evidence="2">3.2.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yraA</name>
        <name evidence="2" type="ORF">LAX5112_02475</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.2.-.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70343.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672066.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02475"/>
    <dbReference type="EnsemblBacteria" id="CTQ70343">
        <property type="protein sequence ID" value="CTQ70343"/>
        <property type="gene ID" value="LAX5112_02475"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016798">
        <property type="term" value="F:hydrolase activity, acting on glycosyl bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008233">
        <property type="term" value="F:peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002818">
        <property type="entry name" value="DJ-1/PfpI"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01965">
        <property type="entry name" value="DJ-1_PfpI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="SSF52317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0645">Protease</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DJ-1_PfpI" evidence="1">
        <location>
            <begin position="36"/>
            <end position="230"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01965"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70343.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="245" mass="26101" checksum="CDCC408D2C56AE7A" modified="2015-12-09" version="1">MSETVDATAPKKVLIVAGNAATSPVTGWPVGFWFAELSHPYWTFVEAGYDVDIASPAGGDLVPDGMSDPEDESGYSAHDLISLGFKTSEKHAALLKGTKPTSEIDPAEYDAILVAGGGSPMVTMIDDEALHAFVARAYEAGKIVALLCHGTCILLKTRLSNGDLLAKGKTWTGFADSEEMYVEAAVGQTFQPFWIEKEANKLEDTNFIVSGMWKPFAVRDGNLITGQQQNSGAVTAELVVQALGQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9Z9</accession>
    <name>A0A0M7A9Z9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02514</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70454.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672090.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70454">
        <property type="protein sequence ID" value="CTQ70454"/>
        <property type="gene ID" value="LAX5112_02514"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007332">
        <property type="entry name" value="DUF411"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04214">
        <property type="entry name" value="DUF411"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809542" evidence="1">
        <location>
            <begin position="24"/>
            <end position="156"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70454.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="156" mass="16857" checksum="5815DC0438670919" modified="2015-12-09" version="1">MLKHKLVRAGALAAALLATPAMADEERTVTVFKTPWCGCCHVWAEEVAKAGYKVEIRDMEDLTSIKKQAGIPGDLQACHTAVLGDERKYVLEGHVPLQAMDKLMSERPDIRGLAVAGMPMGSLGMDHDPAAQYLVHALPMEPGATPGVYMEMGEVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAY4</accession>
    <name>A0A0M7AAY4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Poly-beta-1,6-N-acetyl-D-glucosamine synthase</fullName>
            <ecNumber evidence="2">2.4.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">icaA</name>
        <name evidence="2" type="ORF">LAX5112_02923</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.4.1.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71771.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672442.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02923"/>
    <dbReference type="EnsemblBacteria" id="CTQ71771">
        <property type="protein sequence ID" value="CTQ71771"/>
        <property type="gene ID" value="LAX5112_02923"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016757">
        <property type="term" value="F:glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="160"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="186"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="481"/>
            <end position="509"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="521"/>
            <end position="548"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="560"/>
            <end position="581"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71771.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="617" mass="68747" checksum="39AE1C23D1A9EA67" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AB90</accession>
    <name>A0A0M7AB90_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="18">Light-harvesting protein B-875 beta chain</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="18" type="primary">pufB</name>
        <name evidence="18" type="ORF">LAX5112_02963</name>
    </gene>
    <organism evidence="18 19">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="19" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="19">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Single-pass type II membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="3">Membrane</location>
            <topology evidence="3">Single-pass type II membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the antenna complex beta subunit family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71891.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02963"/>
    <dbReference type="EnsemblBacteria" id="CTQ71891">
        <property type="protein sequence ID" value="CTQ71891"/>
        <property type="gene ID" value="LAX5112_02963"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030077">
        <property type="term" value="C:plasma membrane light-harvesting complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042314">
        <property type="term" value="F:bacteriochlorophyll binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045156">
        <property type="term" value="F:electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019684">
        <property type="term" value="P:photosynthesis, light reaction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.250">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000066">
        <property type="entry name" value="Antenna_a/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023624">
        <property type="entry name" value="Antenna_beta_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002362">
        <property type="entry name" value="LHB-1/5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035889">
        <property type="entry name" value="Light-harvesting_complex"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00556">
        <property type="entry name" value="LHC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00674">
        <property type="entry name" value="LIGHTHARVSTB"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56918">
        <property type="entry name" value="SSF56918"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0042">Antenna complex</keyword>
    <keyword evidence="11" id="KW-0076">Bacteriochlorophyll</keyword>
    <keyword evidence="5" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6" id="KW-0148">Chlorophyll</keyword>
    <keyword evidence="13" id="KW-0157">Chromophore</keyword>
    <keyword evidence="15" id="KW-0437">Light-harvesting polypeptide</keyword>
    <keyword evidence="10" id="KW-0460">Magnesium</keyword>
    <keyword evidence="14 16" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="19" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 16" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="12 16" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="22"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="domain" description="LHC" evidence="17">
        <location>
            <begin position="14"/>
            <end position="48"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002455"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004249"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004606"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022494"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022549"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022956"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00022991"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00023243"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="Pfam" id="PF00556"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="EMBL" id="CTQ71891.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="48" mass="5613" checksum="01D326F20D4EB1AA" modified="2015-12-09" version="1">MASDKETLTGLSREEAQEFHRLFVKFAIAMSLAPFLAHISMWLYKPWL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AC31</accession>
    <name>A0A0M7AC31_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative oxidoreductase</fullName>
            <ecNumber evidence="2">1.-.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03260</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the short-chain dehydrogenases/reductases (SDR) family.</text>
    </comment>
    <dbReference type="EC" id="1.-.-.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72658.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672679.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72658">
        <property type="protein sequence ID" value="CTQ72658"/>
        <property type="gene ID" value="LAX5112_03260"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00106">
        <property type="entry name" value="adh_short"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU000363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72658.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="246" mass="25783" checksum="F817BBEE5845C2FD" modified="2015-12-09" version="1">MSKIEGKAVLVTGANRGIGRAFVTALLERGAAKVYAAARQPETLNDVVAESNGKVVPVKLDVTKPEDIAAAAKHKDVALVINNAGTAGFSSFTNPDAADRGRSEMETNYFGTLNVSQAFASILKANGGGAIINLGSIASHVNFPVLGTYSASKAAVHSLTQGLRAELAEQGTQVVGVYPGPVDTDMAEKFETDKTSPQEVVRQILDALDNGEENVFPDPTSTQLYEQFLAAPDATAKFVGQTYLPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACL8</accession>
    <name>A0A0M7ACL8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Chromate transport protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">chrA</name>
        <name evidence="9" type="ORF">LAX5112_03074</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72156.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672564.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03074"/>
    <dbReference type="EnsemblBacteria" id="CTQ72156">
        <property type="protein sequence ID" value="CTQ72156"/>
        <property type="gene ID" value="LAX5112_03074"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015109">
        <property type="term" value="F:chromate transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014047">
        <property type="entry name" value="Chr_Tranpt_l_chain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003370">
        <property type="entry name" value="Chromate_transpt"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02417">
        <property type="entry name" value="Chromate_transp"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004810">
        <property type="entry name" value="ChrA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00937">
        <property type="entry name" value="2A51"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="102"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="130"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="163"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="216"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="253"/>
            <end position="277"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="297"/>
            <end position="315"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="327"/>
            <end position="348"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="360"/>
            <end position="390"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="434"/>
            <end position="451"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005262"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ72156.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="452" mass="47830" checksum="538338916CB12E8F" modified="2015-12-09" version="1">MRVTGTHMSVSPDTNKNKENLNDNLPSLVEVTKVASKVGLLSFGGPAAQISVMHHEFVETRKWLSEERFLHALNYCMLLPGPEAQQLATYCGWLTGKTLGGLIAGLLFILPGALTMAVVSYIYAAYGETQIINALFYGIKAGVLAIVLQALFRIGAKALKTRLNWLLCGLSFCALFFFAVPFPFVIVAAGAIGLVFGKREEESERLADTSQSHPSAINTLKTLAIGGIVWLTPPFLAALLLTPQSVIVDVAGFFATLAVVSFGGAYALLSYMAQVAVDTKGWLTAGQMLDGLGLAETTPGPLILVTQFVGFLGGWQNPGPLTPATMALLAAAMTTWVTFVPSFLFVLAGAPWMERLYGNAYLASALSAITAAVAGTILNLAVWFAINVLFTETKTASIGPVTVIAPTPGSLDTILFAIAVTAAILVFWAKRGMFTVIGTTAVLGLAARMLTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACP5</accession>
    <name>A0A0M7ACP5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Molybdenum transport system permease protein ModB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">modB_3</name>
        <name evidence="7" type="ORF">LAX5112_03257</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72649.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672676.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03257"/>
    <dbReference type="EnsemblBacteria" id="CTQ72649">
        <property type="protein sequence ID" value="CTQ72649"/>
        <property type="gene ID" value="LAX5112_03257"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="70"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="99"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="151"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="200"/>
            <end position="230"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="250"/>
            <end position="271"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="304"/>
            <end position="327"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="363"/>
            <end position="383"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="403"/>
            <end position="422"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="434"/>
            <end position="459"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="480"/>
            <end position="504"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="533"/>
            <end position="553"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="64"/>
            <end position="272"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="358"/>
            <end position="555"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ72649.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="571" mass="60735" checksum="C6C17EC7DBCC0192" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AG59</accession>
    <name>A0A0M7AG59_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">LprI domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03747</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74068.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673071.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74068">
        <property type="protein sequence ID" value="CTQ74068"/>
        <property type="gene ID" value="LAX5112_03747"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009739">
        <property type="entry name" value="LprI_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07007">
        <property type="entry name" value="LprI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809639" description="LprI domain-containing protein" evidence="1">
        <location>
            <begin position="24"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="domain" description="LprI" evidence="2">
        <location>
            <begin position="28"/>
            <end position="128"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ74068.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="137" mass="14963" checksum="C3ED657F7B1E9697" modified="2015-12-09" version="1">MRFLVVSLAVVAFGAALPPAVRAQDVNCKEPQTQLDMTICAKKDWEAADAELNAAYKTAMAAMKQTDSYLSDDLKGAAKTLTTAQRAWIPFRDKACESYGFLARGGSMEPMLVLQCRADLTRQRTSQLKDLTQGLGN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AG74</accession>
    <name>A0A0M7AG74_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Plasmid recombination enzyme</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03605</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73637.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672960.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03605"/>
    <dbReference type="EnsemblBacteria" id="CTQ73637">
        <property type="protein sequence ID" value="CTQ73637"/>
        <property type="gene ID" value="LAX5112_03605"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001668">
        <property type="entry name" value="Mob_Pre"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01076">
        <property type="entry name" value="Mob_Pre"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ73637.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="422" mass="47610" checksum="62FB27F4A8011F8B" modified="2015-12-09" version="1">MGYQFIHLEAYSRKADSKGRSVDWVLAEARRDPKASLHVECPAPPELIHGINLDELAALHDERADVATTTLKNGKMRKVRRDQKSLLTVVASYPTPLKEVTENSAEHESLKSWEQRTVKWLQSQFGDDLMTVIRHTDERYPHLHAYVLPGSDQELRALRMHPGHEAKRRVMDSDSNPSRKKEVNRLGDRAYRDAMRRWQDSYHKNVGVPSGLTRLGPARRRLSREAWQAEQVAARAVKAAEERAARYVEAVKSKGSAYAEKIKAEAADIRKEAELRASEAKAAQVRASQLERQAQGVLERARLEAARILSKVAPYRKAGAFVRSIWDGLSSSKIRKKVRSEFAQQIDNLSREASEEAASRRRAEQRASELEGVVRNSKLIQAATSHEVYRLKRRLEPEIIENPNLLTSETALTVPSGGSHGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGJ5</accession>
    <name>A0A0M7AGJ5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Glucans biosynthesis glucosyltransferase H</fullName>
            <ecNumber evidence="4">2.4.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">opgH</name>
        <name evidence="4" type="ORF">LAX5112_03645</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.4.1.-" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73747.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03645"/>
    <dbReference type="EnsemblBacteria" id="CTQ73747">
        <property type="protein sequence ID" value="CTQ73747"/>
        <property type="gene ID" value="LAX5112_03645"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016757">
        <property type="term" value="F:glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001173">
        <property type="entry name" value="Glyco_trans_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00535">
        <property type="entry name" value="Glycos_transf_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="21"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="53"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="376"/>
            <end position="401"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="413"/>
            <end position="437"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="444"/>
            <end position="464"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="528"/>
            <end position="547"/>
        </location>
    </feature>
    <feature type="domain" description="Glyco_trans_2-like" evidence="3">
        <location>
            <begin position="132"/>
            <end position="290"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="589"/>
            <end position="610"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00535"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ73747.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="610" mass="66308" checksum="A47A11D1E454DB87" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGY9</accession>
    <name>A0A0M7AGY9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03344</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72874.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672758.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03344"/>
    <dbReference type="EnsemblBacteria" id="CTQ72874">
        <property type="protein sequence ID" value="CTQ72874"/>
        <property type="gene ID" value="LAX5112_03344"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018677">
        <property type="entry name" value="DUF2157"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09925">
        <property type="entry name" value="DUF2157"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="44"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="77"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="106"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="137"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="175"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="201"/>
            <end position="219"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="231"/>
            <end position="252"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="273"/>
            <end position="297"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="309"/>
            <end position="331"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="338"/>
            <end position="357"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="363"/>
            <end position="382"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="389"/>
            <end position="407"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="413"/>
            <end position="432"/>
        </location>
    </feature>
    <feature type="domain" description="DUF2157" evidence="2">
        <location>
            <begin position="16"/>
            <end position="151"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF09925"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ72874.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="449" mass="47594" checksum="3C83DB392AF1EB98" modified="2015-12-09" version="1">MFDWAYKKRLRDDLETWVGKGWLTPEGAAAILEDQDQDDGRSRLPMALAGIGVVCVALALFAFIAANWGAIPKSIKLAGIAALILGAHFLAALASRSGKKGVSDLATGFATLVFVGGMALVGQIFHMPADWSGGAFLVCMGALAAAWLSGSVTSLTVAAIAAVTWQSSRVFTDHAGGADAFISVVFLAAIFLHPFFHPARLSRFAAIAVLLVTYGRWFGEVADRMPGGDDAVGAMILAGFGGLVATMVQLGPIGDLYVKWSSYKPVKTHAHWLMLRALQDIGFMMLCALVFVSLIAVQEFDDGVPLMRVFSLPVALPLLSAVVLCVIGLLMSFKTEKALALFAAVGLALLTCLAPLVVENVLLVSALALASLIGLCTLGTWFNNRFWMLCAYLALTGVGLWLLQVTIGSLLGQSVFFLIAGLVLLGMALWLARLFKRKSGPADNAEARS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AH26</accession>
    <name>A0A0M7AH26_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03562</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73520.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451357.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03562"/>
    <dbReference type="EnsemblBacteria" id="CTQ73520">
        <property type="protein sequence ID" value="CTQ73520"/>
        <property type="gene ID" value="LAX5112_03562"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="49"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="92"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="99"/>
            <end position="121"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ73520.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="121" mass="13382" checksum="78CF6BD52D6A3677" modified="2015-12-09" version="1">MTRFIKNLILLAIAVVLVPLSVANRHTVSLALNPFDPQDPRLTIPDIPLFWIIFASLGCGIIVGGIGSWAKQGRWRKEARVKRREADKWHKEADQLRELTTDGQGSSTTASLPRPGNRTAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AH74</accession>
    <name>A0A0M7AH74_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Probable septum site-determining protein MinC</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6 9" type="primary">minC</name>
        <name evidence="9" type="ORF">LAX5112_03390</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5 6">Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Interacts with MinD and FtsZ.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the MinC family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72974.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672794.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03390"/>
    <dbReference type="EnsemblBacteria" id="CTQ72974">
        <property type="protein sequence ID" value="CTQ72974"/>
        <property type="gene ID" value="LAX5112_03390"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000902">
        <property type="term" value="P:cell morphogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000917">
        <property type="term" value="P:division septum assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901891">
        <property type="term" value="P:regulation of cell septum assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00267">
        <property type="entry name" value="MinC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016098">
        <property type="entry name" value="CAP/MinC_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013033">
        <property type="entry name" value="MinC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036145">
        <property type="entry name" value="MinC_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005526">
        <property type="entry name" value="Septum_form_inhib_MinC_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34108">
        <property type="entry name" value="PTHR34108"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03775">
        <property type="entry name" value="MinC_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63848">
        <property type="entry name" value="SSF63848"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01222">
        <property type="entry name" value="minC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="2 6" id="KW-0132">Cell division</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0717">Septation</keyword>
    <feature type="domain" description="MinC_C" evidence="8">
        <location>
            <begin position="172"/>
            <end position="272"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="120"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="122"/>
            <end position="136"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006291"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023210"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00025606"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00267"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF03775"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ72974.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="276" mass="29155" checksum="7BDDCAECE4AB7BAD" modified="2015-12-09" version="1">MKFKGKSFIAIVLSPEPPYQDWFKEIDRIIARTPGFFIDRPIVLDVRGTKIPIEELETVLEGLSARSIRVFGIDGISGTRLKPGMPPSFGGGRLTADVEIPETAAADAPETAAVAAETLGQKTAGKTDTSKNAAKSNKPAADPATKTAAKPAARKADRQHRAVPEANGSSIVITEHVRSGQSILHPDGDVTIVGSVSSGAEIIAGGSIHVYGALRGRALAGVSGRDGARIFCSKLDAELVSINGLYKVADDFEPALRDAPAQIRFENESLVFEQLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHK5</accession>
    <name>A0A0M7AHK5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03768</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74127.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673089.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03768"/>
    <dbReference type="EnsemblBacteria" id="CTQ74127">
        <property type="protein sequence ID" value="CTQ74127"/>
        <property type="gene ID" value="LAX5112_03768"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019867">
        <property type="term" value="C:outer membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043165">
        <property type="term" value="P:Gram-negative-bacterium-type cell outer membrane assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007485">
        <property type="entry name" value="LPS_assembly_LptE"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04390">
        <property type="entry name" value="LptE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74127.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="188" mass="20110" checksum="EFC0651E186A5D98" modified="2015-12-09" version="1">MSLFDQVLTSGQVARNLALAGLLTFGALAGGCQIRPLYGTTATGFGGTQTVSSDLAAIDIESIGTDVSGRTLYNELTFNFERGTTAPAKKYRLKVLEDTSTASVAVEQFSDVPSAYTLTMNASFVLSDLETDKTLMTGRSFQSASYDFSSQRFANLRAQRDAEERVAKAVAEDITARIAGYFATHQGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHU1</accession>
    <name>A0A0M7AHU1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">regB</name>
        <name evidence="6" type="ORF">LAX5112_03800</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74217.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673112.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03800"/>
    <dbReference type="EnsemblBacteria" id="CTQ74217">
        <property type="protein sequence ID" value="CTQ74217"/>
        <property type="gene ID" value="LAX5112_03800"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0418">Kinase</keyword>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="24"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="49"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="128"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="159"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="5">
        <location>
            <begin position="216"/>
            <end position="429"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ74217.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="441" mass="47288" checksum="6433EE4CBA5BE25C" modified="2015-12-09" version="1">MADDPTSTVLLQHRHLKLDTLVRLRWLAIGGQTIALLAVHVGLGYPLPAVPAFALVAMSAWLNIFLKIRAPAVTRLSERGGVIQLGYDILQMSGLLFLTGGLGNPFAFLLMAPVMVSAAGLSARHTVLLGALATLCASILAVYHFPLPWPVGNEFRLPVVYSVGIWVALVLTLVFMAIYAFRVAEEARQMADALAATELVLAREQHLNALDGLATAAAHELGTPLATIYLVAKELSDEFDAEDPRGEDVALIRSQAERCRTILKQLTSLSSEEDKTYQSMPVSQLIEDVIDPYRGTGVPIHPVLEGEGPEPIGTRNAAIRYGLGNLVENAIDFAKSSVTVSAAWDDKTLSLTIEDDGPGFAQEILSKIGDPYVSIRGGKSRGKGTAGGLGLGIFIAKTLLERTGARVQLGNLGPGSRGAMIRVSWPREVFERHQGVDETAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJP2</accession>
    <name>A0A0M7AJP2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Bacterial extracellular solute-binding proteins, family 3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_03929</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74636.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03929"/>
    <dbReference type="EnsemblBacteria" id="CTQ74636">
        <property type="protein sequence ID" value="CTQ74636"/>
        <property type="gene ID" value="LAX5112_03929"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809694" evidence="2">
        <location>
            <begin position="20"/>
            <end position="255"/>
        </location>
    </feature>
    <feature type="domain" description="PBPb" evidence="3">
        <location>
            <begin position="30"/>
            <end position="248"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00497"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ74636.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="255" mass="29140" checksum="70DE4AD9C2A2D405" modified="2015-12-09" version="1">MRMFFVQLFIFLFAATAVADEKPTKIRLTNGEWAPYQSQDLPGYGVSSQLVTKAFEAVGIDVEYGFFPWNRAMLLVEQGAWDGTFMWVLTPERERLYLASEPLFVLREVIFYSKDNPVEAKELKDLNGKVMGALDSSAFGQQFAPLIDDGSIIVARVPNNQQLFQMLAMGRVDFVPELETSGYEAALAHLTEDQQKRIGHLERLTYPWSYHLLISRQTEHGPYFVDAFNRGMQIIRANGEFDRIIGPYIRPRSLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJU6</accession>
    <name>A0A0M7AJU6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04231</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75435.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04231"/>
    <dbReference type="EnsemblBacteria" id="CTQ75435">
        <property type="protein sequence ID" value="CTQ75435"/>
        <property type="gene ID" value="LAX5112_04231"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043708">
        <property type="entry name" value="DUF5648"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18885">
        <property type="entry name" value="DUF5648"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ75435.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="361" mass="39623" checksum="F5E9F247730FAD21" modified="2015-12-09" version="1">MVEIFKNDTEATATDLGTLAFASNLPTDVIAKTNIWTFDHVFSLIDPPISDDIYDYYSFDPFQLASVTVSFHARSTGDYANYVTVVPVQGVSKIEGYASGVWTGGEHVNSPYEAFAETLITDSLTAWKNSVASEIDTSGVTWQRDGFPDTEAIWHLTGEEVVLAVTGFEFDGTTDQISANGGNPERVDYRLAIDPHVGDIPDVTLPVDTPDADNSPYEVYRFFNTLTGSHFFTTSTTERDSIITNTPTMTYEGNVFDSNATAENGGSAVYRFYNTATGTHFYTANAEEAANISSNLPHFNAEGIVYYAHSASDSGGTALYRFYNTSNDSHFFTTSVTERDNIISTLGHYNYEGVSYYVDLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AK48</accession>
    <name>A0A0M7AK48_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Insertion element IS2 transposase InsD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04262</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75498.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673492.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000021.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75498">
        <property type="protein sequence ID" value="CTQ75498"/>
        <property type="gene ID" value="LAX5112_04262"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001584">
        <property type="entry name" value="Integrase_cat-core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13683">
        <property type="entry name" value="rve_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50994">
        <property type="entry name" value="INTEGRASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Integrase catalytic" evidence="1">
        <location>
            <begin position="1"/>
            <end position="117"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50994"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75498.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="120" mass="13515" checksum="AE46013D58D7CA34" modified="2015-12-09" version="1">MIKSIHVKQKARHGASLLNWPPFRSDNGSAYTAKDTRIFAQQIGLKSCFTPVKSPQSNGMSEAFVKTLKCDYIRVNPLPDAEHVLSLIGAWIEDYNENYPHSGLKWKSPHEFIKALTETA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKD6</accession>
    <name>A0A0M7AKD6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Lipopolysaccharide export system ATP-binding protein LptB</fullName>
            <ecNumber evidence="5">3.6.3.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">lptB_7</name>
        <name evidence="5" type="ORF">LAX5112_04293</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.6.3.-" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000022">
        <property type="protein sequence ID" value="CTQ75588.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673525.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000022.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04293"/>
    <dbReference type="EnsemblBacteria" id="CTQ75588">
        <property type="protein sequence ID" value="CTQ75588"/>
        <property type="gene ID" value="LAX5112_04293"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032823">
        <property type="entry name" value="BCA_ABC_TP_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12399">
        <property type="entry name" value="BCA_ABC_TP_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="6"/>
            <end position="247"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="38"/>
            <end position="45"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ75588.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="249" mass="26556" checksum="CBEE6FAC00908517" modified="2015-12-09" version="1">MTEAILATQGISKSFGALKASDDVSIDLMAGEIHAIIGPNGAGKSTLIKQICGGLKPDTGTVKLLGEDVTDLPTELRARAGLGRTFQISALAMEDTVLQNAVLGALGGQGNPWRFFKPVLKDKDLLDTAMEALERVGLQDHAKTRTAELSHGQRRQLEVAVALTLKPKAFVMDEPMAGLGTEGSKRLTGFLGDLRHQAPILLVEHDMDAVFALADRISVLVYGKVIATGTVEEIRANKDVRDAYLGDEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALI6</accession>
    <name>A0A0M7ALI6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Ribosomal RNA small subunit methyltransferase A</fullName>
            <ecNumber evidence="6">2.1.1.182</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">16S rRNA dimethyladenosine transferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">16S rRNA dimethylase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6 9" type="primary">rsmA</name>
        <name evidence="6" type="synonym">ksgA</name>
        <name evidence="9" type="ORF">LAX5112_03874</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>adenosine(1518)/adenosine(1519) in 16S rRNA + 4 S-adenosyl-L-methionine = 4 H(+) + N(6)-dimethyladenosine(1518)/N(6)-dimethyladenosine(1519) in 16S rRNA + 4 S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:19609"/>
            <dbReference type="Rhea" id="RHEA-COMP:10232"/>
            <dbReference type="Rhea" id="RHEA-COMP:10233"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:74411"/>
            <dbReference type="ChEBI" id="CHEBI:74493"/>
            <dbReference type="EC" id="2.1.1.182"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. RsmA subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.182" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74474.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673181.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03874"/>
    <dbReference type="EnsemblBacteria" id="CTQ74474">
        <property type="protein sequence ID" value="CTQ74474"/>
        <property type="gene ID" value="LAX5112_03874"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052908">
        <property type="term" value="F:16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00607">
        <property type="entry name" value="16SrRNA_methyltr_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001737">
        <property type="entry name" value="KsgA/Erm"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023165">
        <property type="entry name" value="rRNA_Ade_diMease-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020596">
        <property type="entry name" value="rRNA_Ade_Mease_Trfase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020598">
        <property type="entry name" value="rRNA_Ade_methylase_Trfase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011530">
        <property type="entry name" value="rRNA_adenine_dimethylase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11727">
        <property type="entry name" value="PTHR11727"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00398">
        <property type="entry name" value="RrnaAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00650">
        <property type="entry name" value="rADc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00755">
        <property type="entry name" value="ksgA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01131">
        <property type="entry name" value="RRNA_A_DIMETH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51689">
        <property type="entry name" value="SAM_RNA_A_N6_MT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2 6 7" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 6 7" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="1 6" id="KW-0698">rRNA processing</keyword>
    <keyword evidence="4 6 7" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="3 6 7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="rADc" evidence="8">
        <location>
            <begin position="35"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6 7">
        <location>
            <position position="28"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6 7">
        <location>
            <position position="30"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6 7">
        <location>
            <position position="55"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6 7">
        <location>
            <position position="77"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6 7">
        <location>
            <position position="103"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6 7">
        <location>
            <position position="123"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00607"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01026"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="SMART" id="SM00650"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ74474.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="283" mass="30026" checksum="876888B393DF5D43" modified="2015-12-09" version="1">MAQIDDLPPLRDVIATHGLNAKKSLGQNFLLDLNLTSRIARSAGSLEDHTVLEIGPGPGGLTRALLAAGAKKVVAIEKDSRCLPALAEIADHYPGRLEVIEGDALEIDPVAITGGGKVRIAANLPYNVGTQLLINWITTPDWPPFWSSLTLMFQKEVGERIAAAPGSKAYGRLGVLAGWRCKGGILFDISPKAFTPPPKVTSAVVHLTPNPAPLPCNLSSLEKLTAAAFGQRRKMLRASLKSLSPDAERLIEKAGLKPTARAEEIDIAGFVNLANTFHAAGTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALT1</accession>
    <name>A0A0M7ALT1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Protocatechuate 3,4-dioxygenase beta chain</fullName>
            <ecNumber evidence="7">1.13.11.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">pcaH</name>
        <name evidence="7" type="ORF">LAX5112_03954</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the intradiol ring-cleavage dioxygenase family.</text>
    </comment>
    <dbReference type="EC" id="1.13.11.3" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74733.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673255.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03954"/>
    <dbReference type="EnsemblBacteria" id="CTQ74733">
        <property type="protein sequence ID" value="CTQ74733"/>
        <property type="gene ID" value="LAX5112_03954"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008199">
        <property type="term" value="F:ferric iron binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018578">
        <property type="term" value="F:protocatechuate 3,4-dioxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019619">
        <property type="term" value="P:3,4-dihydroxybenzoate catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.130.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000627">
        <property type="entry name" value="Intradiol_dOase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015889">
        <property type="entry name" value="Intradiol_dOase_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024756">
        <property type="entry name" value="PCDO_beta_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012785">
        <property type="entry name" value="Protocat_dOase_b"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00775">
        <property type="entry name" value="Dioxygenase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12391">
        <property type="entry name" value="PCDO_beta_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49482">
        <property type="entry name" value="SSF49482"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02422">
        <property type="entry name" value="protocat_beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 7" id="KW-0223">Dioxygenase</keyword>
    <keyword evidence="3 7" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PCDO_beta_N" evidence="6">
        <location>
            <begin position="7"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="domain" description="INTRADIOL_DIOXYGENAS" evidence="5">
        <location>
            <begin position="44"/>
            <end position="227"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022964"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00775"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF12391"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ74733.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="241" mass="27216" checksum="90D94C7E8402A8EC" modified="2015-12-09" version="1">MQPGPYYQRDRQWQPPALTPDYKTSVSRSPQYSMISLETTVSEITGPVFGHNDIDPIDKDLLSNYAKPGESPIGERIILHGRVLDENAKPVPNTLVEIWQANSGGRYRHKKDTYLAPIDPNFGGCGRTLTDENGYYAFRTVKPGAYPWRNWVNNWRPAHVHISIFGSAFAQRLITQCYFEGDPLIAKCPIVNSIPDPDAVDQLVARLDLNATIPLDTIAYKFDIVLRGRRSTLFENRPEGN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AN55</accession>
    <name>A0A0M7AN55_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Flagella basal body P-ring formation protein FlgA</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">flgA</name>
        <name evidence="6" type="ORF">LAX5112_04097</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 4">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the FlgA family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ75044.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008189923.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04097"/>
    <dbReference type="EnsemblBacteria" id="CTQ75044">
        <property type="protein sequence ID" value="CTQ75044"/>
        <property type="gene ID" value="LAX5112_04097"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044780">
        <property type="term" value="P:bacterial-type flagellum assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017585">
        <property type="entry name" value="Flag_basal_body_FlgA_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039246">
        <property type="entry name" value="Flagellar_FlgA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013974">
        <property type="entry name" value="SAF"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36307">
        <property type="entry name" value="PTHR36307"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13144">
        <property type="entry name" value="ChapFlgA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00858">
        <property type="entry name" value="SAF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03170">
        <property type="entry name" value="flgA_cterm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1005">Bacterial flagellum biogenesis</keyword>
    <keyword evidence="6" id="KW-0966">Cell projection</keyword>
    <keyword evidence="6" id="KW-0969">Cilium</keyword>
    <keyword evidence="6" id="KW-0282">Flagellum</keyword>
    <keyword evidence="3 4" id="KW-0574">Periplasm</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005732214" description="Flagella basal body P-ring formation protein FlgA" evidence="4">
        <location>
            <begin position="24"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="domain" description="SAF" evidence="5">
        <location>
            <begin position="26"/>
            <end position="89"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU362063"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM00858"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ75044.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="152" mass="16336" checksum="BD7D50F3BAC8C956" modified="2015-12-09" version="1">MTKALKLVAFCLAMLTAAPSAFAASIELPVARQTIPAGSEIGHRDLVERKFPSRTATQFAVASHRSQLVGQVTRRTLLPGQPIPINSVEQPLLVKRGEPARLVFQEQGLVIVMQVEALQNGGAGSFVRVRNVDSGLVVSGRVQQDGTIRVEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AN74</accession>
    <name>A0A0M7AN74_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Argininosuccinate lyase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_04644</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UPF0065 (bug) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000027">
        <property type="protein sequence ID" value="CTQ76588.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673827.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000027.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04644"/>
    <dbReference type="EnsemblBacteria" id="CTQ76588">
        <property type="protein sequence ID" value="CTQ76588"/>
        <property type="gene ID" value="LAX5112_04644"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.190.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005064">
        <property type="entry name" value="BUG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042100">
        <property type="entry name" value="Bug_dom1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42928">
        <property type="entry name" value="PTHR42928"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03401">
        <property type="entry name" value="TctC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF017082">
        <property type="entry name" value="YflP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0456">Lyase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809609" evidence="2">
        <location>
            <begin position="22"/>
            <end position="316"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006987"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ76588.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="316" mass="33449" checksum="66BDD77B933AEF22" modified="2015-12-09" version="1">MKLKSALLAATLAVFAGAASAEEFPSGSVDYIIPFGPGGESDITARFQQPFFEKLYGEQMVVNYQPGGGGAVGWSQLNNMAGDGSVIMGINLPHIIIKPKQGDVGFQTEDLAAVYMFHYTPDAIVVTADSPYMTLQDLIDDAKANPKQVIFSGSGKGTANHLAQVQFDEMAGMESTYVSFKGTGASVTALLGKQVKAAWGYTTVGAAQGDKVRLLAVAMEDRHPAFPDVPTFRELGYDMVSGAYRGIAVPNSASEEVRTQVSDAIKAINADPDFQKQMLDGGFALVDVGYGAEMDAFISDKAEGYLNAARSAGIIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANQ8</accession>
    <name>A0A0M7ANQ8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Anaerobic benzoate catabolism transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04490</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000025">
        <property type="protein sequence ID" value="CTQ76161.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673698.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000025.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04490"/>
    <dbReference type="EnsemblBacteria" id="CTQ76161">
        <property type="protein sequence ID" value="CTQ76161"/>
        <property type="gene ID" value="LAX5112_04490"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013096">
        <property type="entry name" value="Cupin_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07883">
        <property type="entry name" value="Cupin_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01381">
        <property type="entry name" value="HTH_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00530">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="1">
        <location>
            <begin position="11"/>
            <end position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76161.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="182" mass="19250" checksum="36A8E784CDE478D1" modified="2015-12-09" version="1">MTPITLIAKAIQRERLKAGMSLSALAKTAGLAKSTLSQLEAGQGNPSVETLWAIASALNVPFSFLFETGTTDKTLIRAGEGEPVASEAAGFTAVLLANCPPGRRRDLYRTSLSGGALRTAEPHPAGTIEHVFVAKGEIRVGPAEELETLSAGDYFRFPGDVAHSYEVLSEEAIILLVMENPV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APA3</accession>
    <name>A0A0M7APA3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Hemin-binding lipoprotein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">hbpA_3</name>
        <name evidence="6" type="ORF">LAX5112_04686</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the bacterial solute-binding protein 5 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000028">
        <property type="protein sequence ID" value="CTQ76719.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04686"/>
    <dbReference type="EnsemblBacteria" id="CTQ76719">
        <property type="protein sequence ID" value="CTQ76719"/>
        <property type="gene ID" value="LAX5112_04686"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030288">
        <property type="term" value="C:outer membrane-bounded periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030678">
        <property type="entry name" value="Peptide/Ni-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039424">
        <property type="entry name" value="SBP_5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000914">
        <property type="entry name" value="SBP_5_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30290">
        <property type="entry name" value="PTHR30290"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00496">
        <property type="entry name" value="SBP_bac_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002741">
        <property type="entry name" value="MppA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="3" id="KW-0574">Periplasm</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809575" evidence="4">
        <location>
            <begin position="28"/>
            <end position="519"/>
        </location>
    </feature>
    <feature type="domain" description="SBP_bac_5" evidence="5">
        <location>
            <begin position="72"/>
            <end position="438"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ76719.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="519" mass="56919" checksum="7197DEAB6F5D0CB7" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQE9</accession>
    <name>A0A0M7AQE9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">LAX5112_04366</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="3">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75804.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673587.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000023.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04366"/>
    <dbReference type="EnsemblBacteria" id="CTQ75804">
        <property type="protein sequence ID" value="CTQ75804"/>
        <property type="gene ID" value="LAX5112_04366"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003726">
        <property type="entry name" value="HCY_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036589">
        <property type="entry name" value="HCY_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02574">
        <property type="entry name" value="S-methyl_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82282">
        <property type="entry name" value="SSF82282"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50970">
        <property type="entry name" value="HCY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="1 3 5" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3 5" id="KW-0808">Transferase</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Hcy-binding" evidence="4">
        <location>
            <begin position="5"/>
            <end position="308"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="225"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="293"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="294"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00333"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ75804.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="311" mass="33748" checksum="D7A3AF4D0FA77F7C" modified="2015-12-09" version="1">MTIYRDSFPPSSVDLFLAYVGMETDLIFNQGVDLPGFASYPLLKTTEGQELLKGYMKDLIALGKETSAGVILESPTWVANRDRGAALGYGFDELKKLNQDAIAMMAAVRLESDHAPIVISANIGPREDAYAPSAQMTPEEAERYHAEQIAVLAETDVDVISGYTLAYPTEAIGMVRAARQFGVPVVISFTVETNGRLPTGESLDEAISGVDTATAGYAAYFMINCAHPEHFSGVLEDASWMQRVRGIIANASRCSHADLDEADELDDGNPSELGVQLSELRRRFPHIKVLGGCCGTDMRHMKQIVTASHTP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARJ3</accession>
    <name>A0A0M7ARJ3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04516</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000025">
        <property type="protein sequence ID" value="CTQ76204.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76204">
        <property type="protein sequence ID" value="CTQ76204"/>
        <property type="gene ID" value="LAX5112_04516"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="50"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="51"/>
            <end position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76204.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="137" mass="16331" checksum="B7AAF32F4A892C26" modified="2015-12-09" version="1">MKLLYKNIEFDLDFHKGRGGEMPSGPGIYAEIHWPTNSLRIGESKNIKSRNRGHISWANRQRSGQISNRESRRKGPIVDLAKRWGAEGLEHFLISNDERLVDRELRVECEKYLHHWAKYHQRTYRNLNRQRGYRISF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARK3</accession>
    <name>A0A0M7ARK3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Biotin transport ATP-binding protein BioM</fullName>
            <ecNumber evidence="5">3.6.3.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">bioM</name>
        <name evidence="5" type="ORF">LAX5112_04792</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.6.3.-" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000031">
        <property type="protein sequence ID" value="CTQ77072.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04792"/>
    <dbReference type="EnsemblBacteria" id="CTQ77072">
        <property type="protein sequence ID" value="CTQ77072"/>
        <property type="gene ID" value="LAX5112_04792"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03225">
        <property type="entry name" value="ABC_cobalt_CbiO_domain1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015856">
        <property type="entry name" value="ABC_transpr_CbiO/EcfA_su"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="24"/>
            <end position="250"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="55"/>
            <end position="62"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ77072.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="258" mass="28089" checksum="8A3A25E686652373" modified="2015-12-09" version="1">MVLWPRKKDKEQTGGCNPDITPYARLENAGLTLGDRKILSGLSLDLQEHRIGVIGLNGSGKSSFARLLNGLHLADEGRVTLFGAVAASVRSELPRHVGFVFQNPDHQAIFPTVEEEIAFGLTQLGASKDESRAKALEFLDVHGCLHLAAKPFAELSGGQKQIVCILAVLVMRPAVLVLDEPMTSLDALASRLIFDKLMSLPQRIVMVSHDLSLLTGFDRVLWLEEGQLRMDGPAAKVIAAYRDDIERRSGTVMEAAAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARS3</accession>
    <name>A0A0M7ARS3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Heme chaperone HemW</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">hemN_2</name>
        <name evidence="4" type="ORF">LAX5112_04817</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the anaerobic coproporphyrinogen-III oxidase family. HemW subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000031">
        <property type="protein sequence ID" value="CTQ77142.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04817"/>
    <dbReference type="EnsemblBacteria" id="CTQ77142">
        <property type="protein sequence ID" value="CTQ77142"/>
        <property type="gene ID" value="LAX5112_04817"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004109">
        <property type="term" value="F:coproporphyrinogen oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006779">
        <property type="term" value="P:porphyrin-containing compound biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034505">
        <property type="entry name" value="Coproporphyrinogen-III_oxidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006638">
        <property type="entry name" value="Elp3/MiaB/NifB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010723">
        <property type="entry name" value="HemN_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004559">
        <property type="entry name" value="HemW-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007197">
        <property type="entry name" value="rSAM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13932">
        <property type="entry name" value="PTHR13932"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06969">
        <property type="entry name" value="HemN_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04055">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDF00562">
        <property type="entry name" value="HemN-like__clustered_with_heat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00029">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00729">
        <property type="entry name" value="Elp3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00539">
        <property type="entry name" value="hemN_rel"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51918">
        <property type="entry name" value="RADICAL_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="2" id="KW-0143">Chaperone</keyword>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2" id="KW-0349">Heme</keyword>
    <keyword evidence="2" id="KW-0408">Iron</keyword>
    <keyword evidence="2" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <feature type="domain" description="Radical SAM core" evidence="3">
        <location>
            <begin position="5"/>
            <end position="241"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006100"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU364116"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ77142.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="387" mass="42983" checksum="77FFEAE4A9A3C924" modified="2015-12-09" version="1">MALIQASDAGFGIYVHWPFCAAKCPYCDFNSHVRHQPVDQARFAAAFERELSHFAEMTKGKVVQSVFLGGGTPSLMEPATVERVLTAISDRWSMDSNVEISLEANPTSVEAERFKGYRAAGVNRVSLGVQSLHDADLKLLGRLHDAATARRAIETARATFPRLSFDLIYARPNQTLAQWEAELKDAIALAADHLSLYQLTIEEGTPFYTLYHAGKLTMPDQDLGAEFYELTQKVTEAEGLPAYEVSNHAKPGAECRHNLVYWRYGDYVGVGPGAHGRLSVGVNRMASSVERHPETWLEAVEQNGHGMIEFSGLNEEEQGDEFLLMGLRLTEGIDLKRYEAFAHRSVDPKRLNDLLEHGMVEELGENRVRATREGFFVLDAVVADLAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASS6</accession>
    <name>A0A0M7ASS6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Glycine betaine transport system permease protein OpuAB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">opuAB_2</name>
        <name evidence="7" type="ORF">LAX5112_04653</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000027">
        <property type="protein sequence ID" value="CTQ76614.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673834.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000027.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04653"/>
    <dbReference type="EnsemblBacteria" id="CTQ76614">
        <property type="protein sequence ID" value="CTQ76614"/>
        <property type="gene ID" value="LAX5112_04653"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="52"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="76"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="160"/>
            <end position="186"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="206"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="283"/>
            <end position="302"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="309"/>
            <end position="326"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="332"/>
            <end position="355"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="367"/>
            <end position="387"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="456"/>
            <end position="475"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="481"/>
            <end position="504"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="329"/>
            <end position="508"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ76614.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="513" mass="55560" checksum="A17BB9A0FDB97E1F" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASX5</accession>
    <name>A0A0M7ASX5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04665</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000028">
        <property type="protein sequence ID" value="CTQ76664.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673849.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000028.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76664">
        <property type="protein sequence ID" value="CTQ76664"/>
        <property type="gene ID" value="LAX5112_04665"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="179"/>
            <end position="214"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76664.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="285" mass="30523" checksum="3CE0BAFF6CB8F774" modified="2015-12-09" version="1">MEKIVTVVFDTEEEAFKGGEALRDLHWNGDVTVYSAGIIEKDANGQISLKKEADEGPINTALGMLVGAMIGVLAGPAAVASGAAVAGSAAAASAATGGLALGSLTGGTLGMIGDLYKSGVDLDILDEFSTALEPGKFALIASVEEYWTAPTDVKMSAAGGTVFRQSRNDVVDDMFVRDMEAFDRDLAQLDEELKQAHEENKAAIKKSIDKVKTRMKSSKEKIDKRLTELSDDFKERTDKLDEQITKAADDAKEKIENRKAEIKADYEERSAKLKKAGEIAKDALT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AT61</accession>
    <name>A0A0M7AT61_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Acyl-CoA dehydrogenase</fullName>
            <ecNumber evidence="9">1.3.99.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">mmgC_7</name>
        <name evidence="9" type="ORF">LAX5112_04763</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 5">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the acyl-CoA dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.3.99.-" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000030">
        <property type="protein sequence ID" value="CTQ76973.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04763"/>
    <dbReference type="EnsemblBacteria" id="CTQ76973">
        <property type="protein sequence ID" value="CTQ76973"/>
        <property type="gene ID" value="LAX5112_04763"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003995">
        <property type="term" value="F:acyl-CoA dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.540.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006089">
        <property type="entry name" value="Acyl-CoA_DH_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006091">
        <property type="entry name" value="Acyl-CoA_Oxase/DH_mid-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046373">
        <property type="entry name" value="Acyl-CoA_Oxase/DH_mid-dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036250">
        <property type="entry name" value="AcylCo_DH-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009075">
        <property type="entry name" value="AcylCo_DH/oxidase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013786">
        <property type="entry name" value="AcylCoA_DH/ox_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037069">
        <property type="entry name" value="AcylCoA_DH/ox_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009100">
        <property type="entry name" value="AcylCoA_DH/oxidase_NM_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00441">
        <property type="entry name" value="Acyl-CoA_dh_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02770">
        <property type="entry name" value="Acyl-CoA_dh_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02771">
        <property type="entry name" value="Acyl-CoA_dh_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47203">
        <property type="entry name" value="SSF47203"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56645">
        <property type="entry name" value="SSF56645"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00072">
        <property type="entry name" value="ACYL_COA_DH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00073">
        <property type="entry name" value="ACYL_COA_DH_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0274">FAD</keyword>
    <keyword evidence="3 5" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="5 9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Acyl-CoA_dh_N" evidence="8">
        <location>
            <begin position="31"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="domain" description="Acyl-CoA_dh_M" evidence="7">
        <location>
            <begin position="146"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="domain" description="Acyl-CoA_dh_1" evidence="6">
        <location>
            <begin position="254"/>
            <end position="397"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009347"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU362125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00441"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF02770"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF02771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ76973.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="405" mass="44359" checksum="1546152400AA9A86" modified="2015-12-09" version="1">MNAPANVKSAPAGGGVFDWQDPFRMRDQLKEDEQLIMDTARSYAQEKLLPRVIEAYREEKTDREIFNEMGELGLLGVTLPEEYGGSGASYVAYGLVAREVERVDSGYRSMMSVQSSLVMYPIYAYGSEEQRNKYLPKLSSGEYVGCFGLTEPDAGSDPAGMRTRAEKIDGGYKLTGSKMWISNSPIADVFVVWAKSEAHDGAIRGFVLEKGMKGLSAPKVGGKLSLRASITGEIVMDNVEVGEGALLPNVSGLKGPFGCLNRARYGISWGAMGAAEDCWTRARQYGLDREQFGRPLAQTQLFQKKLADMQTEIALGLQAALRVGQLFDAGQMAPEMISIVKRNNCGKALDIARQARDMHGGNGISEEYHVMRHAQNLETVNTYEGTHDVHALILGRAQTGLQAFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AUB0</accession>
    <name>A0A0M7AUB0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ParB/RepB/Spo0J family partition protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04887</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000034">
        <property type="protein sequence ID" value="CTQ77373.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674032.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000034.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04887"/>
    <dbReference type="EnsemblBacteria" id="CTQ77373">
        <property type="protein sequence ID" value="CTQ77373"/>
        <property type="gene ID" value="LAX5112_04887"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003115">
        <property type="entry name" value="ParB/Sulfiredoxin_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036086">
        <property type="entry name" value="ParB/Sulfiredoxin_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011111">
        <property type="entry name" value="Plasmid_RepB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02195">
        <property type="entry name" value="ParBc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07506">
        <property type="entry name" value="RepB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00470">
        <property type="entry name" value="ParB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF110849">
        <property type="entry name" value="SSF110849"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ParB" evidence="1">
        <location>
            <begin position="10"/>
            <end position="105"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00470"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77373.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="301" mass="33554" checksum="F9024C942CF215C3" modified="2015-12-09" version="1">MPDDREERVELIPINSVHILNPRDRNKRRFRSVVESIAAVGLKRPITVSRRQAANGRTNSGKQFDLVCGQGRLEAFKELGETSIPAIIIQVDPEECYLLSLVENLARRHHTPLELMRSIGVLSDTGYGPADIAAKTGLSREYVSGIINLISNGEDRLIAAVERSQIPVSVAVDIASADDDNAQQALTEAYARKELRGQKLQIAMRVVRNRARFGKKLAQGQGRQSRTLTAQAMVRAYRQETERQRNLVRKADLTENRLLVITNAMRVLFDDEHFVTLLRAEGLETLPRQLADRIIASGGGT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AV90</accession>
    <name>A0A0M7AV90_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_05026</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000042">
        <property type="protein sequence ID" value="CTQ77713.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_05026"/>
    <dbReference type="EnsemblBacteria" id="CTQ77713">
        <property type="protein sequence ID" value="CTQ77713"/>
        <property type="gene ID" value="LAX5112_05026"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ77713.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="37" mass="4066" checksum="996EC7F40640CBE4" modified="2015-12-09" version="1">MLFFCAAGLMYLTLTLVSNRVIAIIEKRARRGIAGPV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZLG3</accession>
    <name>A0A0M6ZLG3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Oxygen sensor protein DosP</fullName>
            <ecNumber evidence="3">3.1.4.52</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">dosP_1</name>
        <name evidence="3" type="ORF">LAX5112_00001</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.4.52" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63609.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00001"/>
    <dbReference type="EnsemblBacteria" id="CTQ63609">
        <property type="protein sequence ID" value="CTQ63609"/>
        <property type="gene ID" value="LAX5112_00001"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071111">
        <property type="term" value="F:cyclic-guanylate-specific phosphodiesterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd01948">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.450">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007890">
        <property type="entry name" value="CHASE2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001633">
        <property type="entry name" value="EAL_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035919">
        <property type="entry name" value="EAL_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000160">
        <property type="entry name" value="GGDEF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05226">
        <property type="entry name" value="CHASE2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00563">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00990">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01080">
        <property type="entry name" value="CHASE2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00052">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00267">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141868">
        <property type="entry name" value="SSF141868"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50883">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="277"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="308"/>
            <end position="326"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="332"/>
            <end position="351"/>
        </location>
    </feature>
    <feature type="domain" description="EAL" evidence="2">
        <location>
            <begin position="675"/>
            <end position="925"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ63609.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="925" mass="102210" checksum="5CD55245A35537F4" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZLP0</accession>
    <name>A0A0M6ZLP0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Gcv operon activator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">gcvA_1</name>
        <name evidence="3" type="ORF">LAX5112_00032</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63685.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00032"/>
    <dbReference type="EnsemblBacteria" id="CTQ63685">
        <property type="protein sequence ID" value="CTQ63685"/>
        <property type="gene ID" value="LAX5112_00032"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="11"/>
            <end position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ63685.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="296" mass="32329" checksum="6E614EFAB78AF125" modified="2015-12-09" version="1">MAVAPPRPKMPPLNALKAFEAAARLNSFSAAADELCVTPAAVAQQIKSLETWTGKKLFKRNAKGVQLTPLGATVLPGFIVAFDTMASSVQTLRATANPHEIRIAATPSISQLWISPRLPGLRATIPDLSLSLTAMEEPPNLAREPFDLSIFFSSKEDDCGNEIFIGSDTIYPVCSPETALKLRTLDDLASATFLYDTTWKSDWETWFSHISDGKRLLKSGPEFSLYSLALQECRNGAGVLIGHDLLVRQELKTGNLVAPFPEKVALQKKLTIKTLHQLDAKSPLGTVVEYLKKPDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZLU6</accession>
    <name>A0A0M6ZLU6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Single-stranded-DNA-specific exonuclease RecJ</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">recJ</name>
        <name evidence="9" type="ORF">LAX5112_00049</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the RecJ family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63739.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670109.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00049"/>
    <dbReference type="EnsemblBacteria" id="CTQ63739">
        <property type="protein sequence ID" value="CTQ63739"/>
        <property type="gene ID" value="LAX5112_00049"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008409">
        <property type="term" value="F:5'-3' exonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001667">
        <property type="entry name" value="DDH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038763">
        <property type="entry name" value="DHH_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003156">
        <property type="entry name" value="DHHA1_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004610">
        <property type="entry name" value="RecJ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041122">
        <property type="entry name" value="RecJ_OB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01368">
        <property type="entry name" value="DHH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02272">
        <property type="entry name" value="DHHA1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17768">
        <property type="entry name" value="RecJ_OB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64182">
        <property type="entry name" value="SSF64182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00644">
        <property type="entry name" value="recJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 9" id="KW-0269">Exonuclease</keyword>
    <keyword evidence="4 9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0540">Nuclease</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DHH" evidence="6">
        <location>
            <begin position="102"/>
            <end position="258"/>
        </location>
    </feature>
    <feature type="domain" description="DHHA1" evidence="7">
        <location>
            <begin position="346"/>
            <end position="472"/>
        </location>
    </feature>
    <feature type="domain" description="RecJ_OB" evidence="8">
        <location>
            <begin position="488"/>
            <end position="597"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005915"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00019841"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022839"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF01368"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF02272"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF17768"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ63739.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="606" mass="64307" checksum="2D45781CDE58F064" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZMT6</accession>
    <name>A0A0M6ZMT6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Beta-hexosaminidase</fullName>
            <ecNumber evidence="5">3.2.1.52</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">nagZ</name>
        <name evidence="5" type="ORF">LAX5112_00170</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the glycosyl hydrolase 3 family.</text>
    </comment>
    <dbReference type="EC" id="3.2.1.52" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64079.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00170"/>
    <dbReference type="EnsemblBacteria" id="CTQ64079">
        <property type="protein sequence ID" value="CTQ64079"/>
        <property type="gene ID" value="LAX5112_00170"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004563">
        <property type="term" value="F:beta-N-acetylhexosaminidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102148">
        <property type="term" value="F:N-acetyl-beta-D-galactosaminidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019800">
        <property type="entry name" value="Glyco_hydro_3_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001764">
        <property type="entry name" value="Glyco_hydro_3_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036962">
        <property type="entry name" value="Glyco_hydro_3_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00933">
        <property type="entry name" value="Glyco_hydro_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00775">
        <property type="entry name" value="GLYCOSYL_HYDROL_F3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="2 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glyco_hydro_3" evidence="4">
        <location>
            <begin position="17"/>
            <end position="297"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005336"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ64079.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="341" mass="36642" checksum="C84F134E4C1C6494" modified="2015-12-09" version="1">MVMIKAFISGCAGTSLSAAEKAFFNEHNPWGLILFARNVDNPDQVRELTRSFRDAVGRADAPVLVDQEGGRVQRLRPPHWRKYPAPKLFGDLYKTDKATGKRAAFLGAQLIAAELSEVGITIDCLPCLDVRFPDTADAIGDRALSEDPETVAILGREMINGAIAGGVLPVIKHIPGHGRAKVDSHLELPRVTDDKNALEAVDFLPFKALADISLGMTAHLLYESIDPENPGTQSSAVINGIIRDEIGFDGCLMSDDISMKALGGDVSSRSTKIWDAGCDVVLHCNGDMSEMQAVADAAPVLAGRSLERCNTALAGYKPLEPDFNADKAWAEFQSLTGWAGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZN15</accession>
    <name>A0A0M6ZN15_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Succinate-semialdehyde dehydrogenase [NADP(+)] GabD</fullName>
            <ecNumber evidence="8">1.2.1.79</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">gabD_1</name>
        <name evidence="8" type="ORF">LAX5112_00002</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="6">Belongs to the aldehyde dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.2.1.79" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63612.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670071.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ63612">
        <property type="protein sequence ID" value="CTQ63612"/>
        <property type="gene ID" value="LAX5112_00002"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0036243">
        <property type="term" value="F:succinate-semialdehyde dehydrogenase (NADP+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009450">
        <property type="term" value="P:gamma-aminobutyric acid catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.309.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.605.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016161">
        <property type="entry name" value="Ald_DH/histidinol_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016163">
        <property type="entry name" value="Ald_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016160">
        <property type="entry name" value="Ald_DH_CS_CYS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029510">
        <property type="entry name" value="Ald_DH_CS_GLU"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016162">
        <property type="entry name" value="Ald_DH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015590">
        <property type="entry name" value="Aldehyde_DH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010102">
        <property type="entry name" value="Succ_semiAld_DH"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00171">
        <property type="entry name" value="Aldedh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53720">
        <property type="entry name" value="SSF53720"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01780">
        <property type="entry name" value="SSADH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00070">
        <property type="entry name" value="ALDEHYDE_DEHYDR_CYS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00687">
        <property type="entry name" value="ALDEHYDE_DEHYDR_GLU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0521">NADP</keyword>
    <keyword evidence="3 6 8" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-0630">Potassium</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aldedh" evidence="7">
        <location>
            <begin position="18"/>
            <end position="476"/>
        </location>
    </feature>
    <feature type="active site" evidence="4">
        <location>
            <position position="254"/>
        </location>
    </feature>
    <feature type="active site" evidence="5">
        <location>
            <position position="288"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022958"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003345"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ63612.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="485" mass="51362" checksum="688D72194758A388" modified="2015-12-09" version="1">MSLNPALLKQQVYIDGSWVDADNGQTMEVTNPATGDVIGTIPVCGREETKRAIDAAHKALPAWKALTAEARATLMHKLCDEIMAVIDDLAVLLTTEMGKPLAEAKGEIALGVKYIRFFAEEGKRVYGDTIPSPWPDRRILVTKEPVGVVGAITPWNFPNSMIARKLGAALAAGCTMVMKPAEFTPYSALIYGILAEKAGIPAGVVNIVTGDAPAIGEEMCENPLLRKITFTGSTRVGKLLAGNAGKNMKKISMELGGNAPFIVFDDADLNKAVEGAIASKFRNSGQTCVCANRIYVQAGVYDAFAAKLKDAIAAQLKPGNGLEDGSTQGPLINEAALEKVADHVADALAKGGELISGGKRSEGPGTFYEPTLIVGATADMKVANEETFGPLAALFKFETEEDAIARANDTEYGLACYFYTQDLGRTFRVMEALQYGLVGINEGVITTEVAPFGGVKDSGIGNEGSKYGLDDYLNIKYSCLGGLGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPZ9</accession>
    <name>A0A0M6ZPZ9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Lipopolysaccharide export system ATP-binding protein LptB</fullName>
            <ecNumber evidence="6">3.6.3.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">lptB_1</name>
        <name evidence="6" type="ORF">LAX5112_00420</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.-" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64839.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451471.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00420"/>
    <dbReference type="EnsemblBacteria" id="CTQ64839">
        <property type="protein sequence ID" value="CTQ64839"/>
        <property type="gene ID" value="LAX5112_00420"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032823">
        <property type="entry name" value="BCA_ABC_TP_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12399">
        <property type="entry name" value="BCA_ABC_TP_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="2"/>
            <end position="250"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="34"/>
            <end position="41"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ64839.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="256" mass="28171" checksum="1560A970A74E47DA" modified="2015-12-09" version="1">MLELDQLVMDFSGFRAVNGCSFRVEEGSITGLIGPNGAGKTTLFNLIAGALQPTSGAIRFLGEDVTPLASHELFHKGLVRTFQIPHEFHKLTALENLMMVPPSQPGESLFSNWLSWGKVKSTEALVEKRAYETLDFLELSHIAHEPAGNLSGGQKKLLELGRTMMTDAKLVLLDEPAAGVNRTLLRKLESKIELLNKDRGYTFILIEHDMEMIEKLCEPVVCMAEGKVLIEGDFQTVRSNPEVLEAYLGETTGDAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQX9</accession>
    <name>A0A0M6ZQX9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Enolase</fullName>
            <ecNumber evidence="8">4.2.1.11</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">2-phospho-D-glycerate hydro-lyase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="8">2-phosphoglycerate dehydratase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8 13" type="primary">eno</name>
        <name evidence="13" type="ORF">LAX5112_00323</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>(2R)-2-phosphoglycerate = H2O + phosphoenolpyruvate</text>
            <dbReference type="Rhea" id="RHEA:10164"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:58289"/>
            <dbReference type="ChEBI" id="CHEBI:58702"/>
            <dbReference type="EC" id="4.2.1.11"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 8">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="activity regulation">
        <text evidence="8">The covalent binding to the substrate causes inactivation of the enzyme, and possibly serves as a signal for the export of the protein.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2 8">Carbohydrate degradation; glycolysis; pyruvate from D-glyceraldehyde 3-phosphate: step 4/5.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="8">Secreted</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="8">Cell surface</location>
        </subcellularLocation>
        <text evidence="8">Fractions of enolase are present in both the cytoplasm and on the cell surface. The export of enolase possibly depends on the covalent binding to the substrate; once secreted, it remains attached to the cell surface.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 8">Belongs to the enolase family.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.11" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64510.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040452025.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00323"/>
    <dbReference type="EnsemblBacteria" id="CTQ64510">
        <property type="protein sequence ID" value="CTQ64510"/>
        <property type="gene ID" value="LAX5112_00323"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00109">
        <property type="reaction ID" value="UER00187"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009986">
        <property type="term" value="C:cell surface"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000015">
        <property type="term" value="C:phosphopyruvate hydratase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004634">
        <property type="term" value="F:phosphopyruvate hydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006096">
        <property type="term" value="P:glycolytic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd03313">
        <property type="entry name" value="enolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.390.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00318">
        <property type="entry name" value="Enolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000941">
        <property type="entry name" value="Enolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036849">
        <property type="entry name" value="Enolase-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029017">
        <property type="entry name" value="Enolase-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020810">
        <property type="entry name" value="Enolase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020809">
        <property type="entry name" value="Enolase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020811">
        <property type="entry name" value="Enolase_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11902">
        <property type="entry name" value="PTHR11902"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00113">
        <property type="entry name" value="Enolase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03952">
        <property type="entry name" value="Enolase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001400">
        <property type="entry name" value="Enolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00148">
        <property type="entry name" value="ENOLASE"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDF00002">
        <property type="entry name" value="enolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01192">
        <property type="entry name" value="Enolase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01193">
        <property type="entry name" value="Enolase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51604">
        <property type="entry name" value="SSF51604"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54826">
        <property type="entry name" value="SSF54826"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01060">
        <property type="entry name" value="eno"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00164">
        <property type="entry name" value="ENOLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 8" id="KW-0324">Glycolysis</keyword>
    <keyword evidence="7 8 13" id="KW-0456">Lyase</keyword>
    <keyword evidence="5 8" id="KW-0460">Magnesium</keyword>
    <keyword evidence="8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8" id="KW-0964">Secreted</keyword>
    <feature type="domain" description="Enolase_N" evidence="12">
        <location>
            <begin position="4"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="domain" description="Enolase_C" evidence="11">
        <location>
            <begin position="138"/>
            <end position="424"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="8 10">
        <location>
            <begin position="363"/>
            <end position="366"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="8 9">
        <location>
            <position position="204"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="8 9">
        <location>
            <position position="336"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8 10">
        <location>
            <position position="154"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8 10">
        <location>
            <position position="163"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="241"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8 10">
        <location>
            <position position="284"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8 10">
        <location>
            <position position="311"/>
        </location>
    </feature>
    <feature type="binding site" description="covalent; in inhibited form" evidence="8">
        <location>
            <position position="336"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8 10">
        <location>
            <position position="387"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005031"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009604"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023152"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00318"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR001400-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR001400-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="SMART" id="SM01192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="SMART" id="SM01193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="CTQ64510.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="424" mass="45165" checksum="5C855008CA73EC94" modified="2015-12-09" version="1">MTAIIDITGRQIFDSRGNPTVEVDVFLEDGSFGRAAVPSGASTGAHEAVELRDGGDRYMGKGVQNAVDAVNGEIFETIGGLEAEDQLQIDRAMIDLDGTPNKARLGANAILGVSLAVSRAAAQATGLPLYRYVGGTSARTLPVPMMNIINGGEHADNPIDFQEFMIMPVGAESLSEAVRMGSEVFHTLKKALSAAGYNTNVGDEGGFAPNLASTDDAIGFVMKAIETAGYKPGEDMFLALDAASTEFFKDGKYVLEGEGKTLNPEEMAKYLEDLVNRYPIISIEDGLAEDDWDGWKAATDLFGDKCQLVGDDLFVTNSARLRQGIEMGVANSILVKVNQIGTLSETLDAVETAHKASYTAVMSHRSGETEDATIADLAVATNCGQIKTGSLARSDRLAKYNQLIRIEEELGPQAFYAGRSILKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRC9</accession>
    <name>A0A0M6ZRC9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Threonine-phosphate decarboxylase</fullName>
            <ecNumber evidence="5">4.1.1.81</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">L-threonine-O-3-phosphate decarboxylase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="primary">cobD</name>
        <name evidence="11" type="ORF">LAX5112_00137</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Decarboxylates L-threonine-O-3-phosphate to yield (R)-1-amino-2-propanol O-2-phosphate, the precursor for the linkage between the nucleotide loop and the corrin ring in cobalamin.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>H(+) + O-phospho-L-threonine = (R)-1-aminopropan-2-yl phosphate + CO2</text>
            <dbReference type="Rhea" id="RHEA:11492"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:58563"/>
            <dbReference type="ChEBI" id="CHEBI:58675"/>
            <dbReference type="EC" id="4.1.1.81"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="4">Cofactor biosynthesis; adenosylcobalamin biosynthesis.</text>
    </comment>
    <dbReference type="EC" id="4.1.1.81" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63983.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670162.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00137"/>
    <dbReference type="EnsemblBacteria" id="CTQ63983">
        <property type="protein sequence ID" value="CTQ63983"/>
        <property type="gene ID" value="LAX5112_00137"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00148"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048472">
        <property type="term" value="F:threonine-phosphate decarboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901605">
        <property type="term" value="P:alpha-amino acid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009236">
        <property type="term" value="P:cobalamin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004839">
        <property type="entry name" value="Aminotransferase_I/II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005860">
        <property type="entry name" value="CobD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004838">
        <property type="entry name" value="NHTrfase_class1_PyrdxlP-BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00155">
        <property type="entry name" value="Aminotran_1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01140">
        <property type="entry name" value="L_thr_O3P_dcar"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00105">
        <property type="entry name" value="AA_TRANSFER_CLASS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0169">Cobalamin biosynthesis</keyword>
    <keyword evidence="8 11" id="KW-0456">Lyase</keyword>
    <keyword evidence="7" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aminotran_1_2" evidence="10">
        <location>
            <begin position="74"/>
            <end position="324"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001790"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00003444"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00004953"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012285"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022573"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00029996"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF00155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ63983.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="333" mass="35707" checksum="B391A180E98DC482" modified="2015-12-09" version="1">MKHGGDLSEAIERFGGTPDQWLDLSTGINPHAYPVPDRFSDKAWTSLPAQSAQDQLIGAARQTYAVPDHLGLAAGPGTQLLLSVLPQLLPQGPVALAAPTYTSHADVWTRDGRKPVELSSIYALPADAKIVLLVNPNNPDGQLVDVKSLLEIARTLTERGGYLVVDEAFADVMPGSSLLPHIGNENILILRSFGKFFGLAGLRLGFLAGPKPMIAKVSALLESWCLSGPALELGTAALKDQAWQKSMTRQLADEMTDLTLALQQNMLSVFGGTPLYALAGTRSAAKLHDALAKQRIWTRIFDYAPTWIRFGLPGGAENLARLTDALAAAQKDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRG2</accession>
    <name>A0A0M6ZRG2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Succinate-semialdehyde dehydrogenase [NADP(+)] GabD</fullName>
            <ecNumber evidence="4">1.2.1.79</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">gabD_2</name>
        <name evidence="4" type="ORF">LAX5112_00449</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.2.1.79" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64927.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670408.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ64927">
        <property type="protein sequence ID" value="CTQ64927"/>
        <property type="gene ID" value="LAX5112_00449"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0036243">
        <property type="term" value="F:succinate-semialdehyde dehydrogenase (NADP+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.309.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.605.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016161">
        <property type="entry name" value="Ald_DH/histidinol_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016163">
        <property type="entry name" value="Ald_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016160">
        <property type="entry name" value="Ald_DH_CS_CYS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016162">
        <property type="entry name" value="Ald_DH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015590">
        <property type="entry name" value="Aldehyde_DH_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00171">
        <property type="entry name" value="Aldedh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53720">
        <property type="entry name" value="SSF53720"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00070">
        <property type="entry name" value="ALDEHYDE_DEHYDR_CYS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 4" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aldedh" evidence="3">
        <location>
            <begin position="30"/>
            <end position="488"/>
        </location>
    </feature>
    <feature type="active site" evidence="2">
        <location>
            <position position="300"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ64927.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="493" mass="53162" checksum="5BF09403D3AD1FA9" modified="2015-12-09" version="1">MTLALQHEPVSANLADMRLLRSFAYVDGHWVAGADNAAFEVSDPATGAVIGDVARLTAGDSAAAVDAATRAFPGWAALLPQDRARILRRWFELIIENKEDLAQLMTLEQGKPLSEARGEIDYGASFVEFYAEEAKRPNIEGITSHLPDAEVELWMEPAGVAALITPWNFPHAMITRKAAAALAAGCPVLVHPSCETPYSALALAELAERAGFPAGVFNVITGKPETIVSAWMDDTRVRVVSFTGSTEIGRLLYRQSADTVKKLVLELGGHAPFLVFADCDLERAIDEAVNAKFATSGQDCLGANRFFVERPVYDAFCQGFAERTQQLSVGPGITDPDIGPLMNLGAVNKQNAQVADALEKGAELLCGGGRHPAGNLFFQPTVLKDVPANALIMREETFGPVAAICPFDDEDGVIARANATDYGLIAYVHTSDPRRIYRASRQLQFGMVAINRTKVTGAPIPFGGMKQSGLGREGARMGMAEFMDIKYVCRDWA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRH7</accession>
    <name>A0A0M6ZRH7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 13">Flagellar biosynthetic protein FlhB</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="primary">flhB_1</name>
        <name evidence="13" type="synonym">flhB</name>
        <name evidence="15" type="ORF">LAX5112_00183</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="12 13">Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="13">Cell membrane</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 13">Belongs to the type III secretion exporter family.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64114.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670191.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00183"/>
    <dbReference type="EnsemblBacteria" id="CTQ64114">
        <property type="protein sequence ID" value="CTQ64114"/>
        <property type="gene ID" value="LAX5112_00183"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044780">
        <property type="term" value="P:bacterial-type flagellum assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009306">
        <property type="term" value="P:protein secretion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1690.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006136">
        <property type="entry name" value="FlhB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006135">
        <property type="entry name" value="T3SS_substrate_exporter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029025">
        <property type="entry name" value="T3SS_substrate_exporter_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30531">
        <property type="entry name" value="PTHR30531"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01312">
        <property type="entry name" value="Bac_export_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00950">
        <property type="entry name" value="TYPE3IMSPROT"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF160544">
        <property type="entry name" value="SSF160544"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00328">
        <property type="entry name" value="flhB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 13" id="KW-1005">Bacterial flagellum biogenesis</keyword>
    <keyword evidence="11 13" id="KW-1006">Bacterial flagellum protein export</keyword>
    <keyword evidence="5 13" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="15" id="KW-0966">Cell projection</keyword>
    <keyword evidence="15" id="KW-0969">Cilium</keyword>
    <keyword evidence="15" id="KW-0282">Flagellum</keyword>
    <keyword evidence="10 13" id="KW-0472">Membrane</keyword>
    <keyword evidence="8 13" id="KW-0653">Protein transport</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 13" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 13" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4 13" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="36"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="91"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="191"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="14">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="14">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010690"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00021622"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022795"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023225"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00025078"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU364091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="CTQ64114.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="358" mass="39415" checksum="73788790A819B759" modified="2015-12-09" version="1">MSEEADKDSKTEEPTEKKIQDAIEKGNTPVSKEAPVLAMLIGALLIGGFAITSGVRQLVSDMAHLLDVSGGLDLGNSADALMLSHSLSIKVGLFLAPIIAILSVSGLASAFLQNKPSIVPNRIKPELSKLSLKKGWSRIFGAQGFVEFLKAVFKFSTVSAIVYAQFRAHESDLINAMFTDPSALPEMILQISLRLISGVCIVTILLVTVDILWSRSHWRKNLRMTKQEVKDEHKQMEGDPIVKARQRSLARDRARNRMMSAVPQATLVVANPTHFAVALRYDGEKNPAPVVVAKGQDLIALKIREIAENNDIPVIEDRQLARSLYAATEVERMIPPEFYRAVAEIICFVYSRKSKTAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRL6</accession>
    <name>A0A0M6ZRL6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">L-lactate utilization operon repressor</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">lutR_1</name>
        <name evidence="5" type="ORF">LAX5112_00427</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64861.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008195721.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
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        <property type="gene ID" value="LAX5112_00427"/>
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        <property type="component" value="Unassembled WGS sequence"/>
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
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        <property type="match status" value="1"/>
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        <property type="match status" value="1"/>
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        <property type="entry name" value="GntR_C"/>
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        <property type="entry name" value="Tscrpt_reg_HTH_GntR"/>
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        <property type="entry name" value="WH-like_DNA-bd_sf"/>
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    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
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        <property type="entry name" value="FCD"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="GntR"/>
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    </dbReference>
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        <property type="entry name" value="HTHGNTR"/>
    </dbReference>
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        <property type="entry name" value="FCD"/>
        <property type="match status" value="1"/>
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        <property type="match status" value="1"/>
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    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH gntR-type" evidence="4">
        <location>
            <begin position="1"/>
            <end position="67"/>
        </location>
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    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="PROSITE" id="PS50949"/>
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    </evidence>
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        <source>
            <dbReference type="EMBL" id="CTQ64861.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="205" mass="22942" checksum="513E6AA8D5D94D85" modified="2015-12-09" version="1">MNGSEIYHRLIGLIEERTLKPGDRLREADLAESFGVSRTPIREGLKRLEAQGLAVHEPNRGMVIPTLDHNQINEVYFMREVLEGTAAGLAAKHASKPEIEILQDLVDADRKRVTDTDSLVRSNREFHRRLCLASHNRYLVDQIEHLRLSLILMAGTTLDTPERRETAVEEHAAIVTAIADGSSDAAEAAARLHIAHAHKTRLQQI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZS98</accession>
    <name>A0A0M6ZS98_9HYPH</name>
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        <submittedName>
            <fullName evidence="4">Benzoate 1,2-dioxygenase electron transfer component</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">benC_2</name>
        <name evidence="4" type="ORF">LAX5112_00249</name>
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        <name type="scientific">Roseibium alexandrii</name>
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            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
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        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
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                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
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        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
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            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
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        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
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        <property type="gene ID" value="LAX5112_00249"/>
    </dbReference>
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        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
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        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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    </dbReference>
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    </dbReference>
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        <property type="entry name" value="FNR_nucleotide-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017938">
        <property type="entry name" value="Riboflavin_synthase-like_b-brl"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08022">
        <property type="entry name" value="FAD_binding_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52343">
        <property type="entry name" value="SSF52343"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63380">
        <property type="entry name" value="SSF63380"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51384">
        <property type="entry name" value="FAD_FR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0223">Dioxygenase</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="29"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="72"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="108"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="133"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="161"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="296"/>
            <end position="314"/>
        </location>
    </feature>
    <feature type="domain" description="FAD-binding FR-type" evidence="3">
        <location>
            <begin position="186"/>
            <end position="286"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="429"/>
            <end position="479"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="463"/>
            <end position="479"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51384"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ64303.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="479" mass="52896" checksum="920920AD0B4D6334" modified="2015-12-09" version="1">MRLIYPHVGFLLFTAVVYSALLSGVPAENLIPATFGVGAFVAMTVCMVLAARIRIVDGLMGGPGRSYQVHRIFAHWAWIMTLAHWVLAEPRGESIVPGWEEFGSRAGTFAGIYLMILVLYGLIPAIPYHVWRWTHYAMGPIYLVTVAHVFLAAVPVEDFSAHWWVLAVLSVVGVAAMARVIAHHLHRPRRMQVSALKNNHDSIDIRLEPRDGKGAVAWCPGQHASLSCSKRGLREPHPFTIASAPNQNGMRFVIFDRGDYTKKLQTQLNVGDEVLLNRIAGDFAPQTDPKRIYRQIWVAGGAGITPFLAALGAMSPDHGPRIDLFYIYRSMNHAVDLNYLAAMAKRLPQLVLHFLGDAEGGRFNMETFDAHLPPGWQSSELFACGPDPLLTIACRSYRAAGGQLPINTEVFDFRNPIRTWRQVFGLGPKRTIQQRPPSEDAHPIGSKTIGAPAGMQPAWPQRRPQQAPEPDPLPSPAAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSJ8</accession>
    <name>A0A0M6ZSJ8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Inner membrane ABC transporter permease protein YnjC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ynjC</name>
        <name evidence="7" type="ORF">LAX5112_00578</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65297.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670506.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00578"/>
    <dbReference type="EnsemblBacteria" id="CTQ65297">
        <property type="protein sequence ID" value="CTQ65297"/>
        <property type="gene ID" value="LAX5112_00578"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="66"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="111"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="151"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="209"/>
            <end position="232"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="252"/>
            <end position="279"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="306"/>
            <end position="331"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="359"/>
            <end position="382"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="398"/>
            <end position="422"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="428"/>
            <end position="447"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="481"/>
            <end position="501"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="531"/>
            <end position="556"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="60"/>
            <end position="275"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="360"/>
            <end position="548"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ65297.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="566" mass="60658" checksum="518D79A3B375A395" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSU6</accession>
    <name>A0A0M6ZSU6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Inner membrane amino-acid ABC transporter permease protein YecS</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">yecS_1</name>
        <name evidence="10" type="ORF">LAX5112_00749</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="8">Cell membrane</location>
            <topology evidence="8">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65768.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008194224.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00749"/>
    <dbReference type="EnsemblBacteria" id="CTQ65768">
        <property type="protein sequence ID" value="CTQ65768"/>
        <property type="gene ID" value="LAX5112_00749"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006865">
        <property type="term" value="P:amino acid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010065">
        <property type="entry name" value="AA_ABC_transptr_permease_3TM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043429">
        <property type="entry name" value="ArtM/GltK/GlnP/TcyL/YhdX-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30614">
        <property type="entry name" value="PTHR30614"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01726">
        <property type="entry name" value="HEQRo_perm_3TM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0029">Amino-acid transport</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="8" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="21"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="70"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="152"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="191"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="9">
        <location>
            <begin position="22"/>
            <end position="207"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ65768.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="220" mass="24928" checksum="680717EAED421970" modified="2015-12-09" version="1">MFDYNFHWRPVMKSLPDLLEAGLLTLQVATLSMIIGIIIGLVLALIRLHLRGPLHWLASAWIELARNTPALFQLFFFGFGLGAFGLHLAPFTIVLAGLSFNCAGYLAENFRGGFQAVPDTQLRAARSLGMSAWQTYTRIIIPQVFRIVYHPLTNQLVWAVLMSSLGMLVGFRELSGETQFFASRTFRIFEYFAVTAIIYYVIVKVILGASRLLAWRLFRY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTK7</accession>
    <name>A0A0M6ZTK7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Stage 0 sporulation protein KD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">oppD_1</name>
        <name evidence="8" type="ORF">LAX5112_00613</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65420.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670569.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00613"/>
    <dbReference type="EnsemblBacteria" id="CTQ65420">
        <property type="protein sequence ID" value="CTQ65420"/>
        <property type="gene ID" value="LAX5112_00613"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015833">
        <property type="term" value="P:peptide transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013563">
        <property type="entry name" value="Oligopep_ABC_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08352">
        <property type="entry name" value="oligo_HPY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01727">
        <property type="entry name" value="oligo_HPY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ABC transporter" evidence="7">
        <location>
            <begin position="5"/>
            <end position="255"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="41"/>
            <end position="48"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ65420.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="324" mass="35131" checksum="B2891DAB2C0BBEF9" modified="2015-12-09" version="1">MTAVLEVAGLKTHFFTHAGVVKAVDGVDFTVNKGEVMGLVGESGSGKSITGFSILGLIDQPGRIVEGSIRFNGDEIANAPEEKLKSIRGNRISMIFQDPMMTLNPVLRIDSQMMEAIFAHEKVSKKEAWERSRDALGLVGIPSPEERLKAYPHQLSGGMRQRVSIAIAFLNKPDLIIADEPTTALDVTIQAQIIHEAQKLTRQTGTAMIWITHDLAVVAGLADRISVMYAGRIVEQGLTDDVIDRPLHPYTVGLLGSVPTANKRGERLFQIEGMTPNMLALPEGCAFAPRCRSASAACKTQPPITHVANRDIRCFNPQAQAAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZU01</accession>
    <name>A0A0M6ZU01_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Putative N-acetylmannosaminyltransferase</fullName>
            <ecNumber evidence="1">2.4.1.187</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">tagA_1</name>
        <name evidence="1" type="ORF">LAX5112_00724</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.4.1.187" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65696.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00724"/>
    <dbReference type="EnsemblBacteria" id="CTQ65696">
        <property type="protein sequence ID" value="CTQ65696"/>
        <property type="gene ID" value="LAX5112_00724"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047244">
        <property type="term" value="F:N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009058">
        <property type="term" value="P:biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06533">
        <property type="entry name" value="Glyco_transf_WecG_TagA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004629">
        <property type="entry name" value="WecG_TagA_CpsF"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34136">
        <property type="entry name" value="PTHR34136"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03808">
        <property type="entry name" value="Glyco_tran_WecG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00696">
        <property type="entry name" value="wecG_tagA_cpsF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ65696.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="278" mass="31160" checksum="B0FAEB1B388383B7" modified="2015-12-09" version="1">MSPQRPRHTQSDQKKHGPWDARQLAQLAQSYHVVEVLGGLPITWTDRKTAAETLIAQALANRGAAKAPFYSTSANGQVVVMCNEDNAVRQEFLQADQILADGMPMVWIARIKHGLQNIERVATTDLYHDVALVAQDIGASFYLLGADEKSNAAAVSNTQKLYPDLNVVGRRNGYFGANEEDAIVSEINDLAPDILWIGMGVPREQQFVSRNLKKLTNVGVIKTSGGLFDFLSLKNPRAPEWMQNLGLEWLYRTMQEPRRLGPRYLQTNHKAFFIMLRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZU44</accession>
    <name>A0A0M6ZU44_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">5-hydroxyisourate hydrolase</fullName>
            <shortName evidence="7">HIU hydrolase</shortName>
            <shortName evidence="7">HIUHase</shortName>
            <ecNumber evidence="7">3.5.2.17</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">pucM_2</name>
        <name evidence="9" type="ORF">LAX5112_00764</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Catalyzes the hydrolysis of 5-hydroxyisourate (HIU) to 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline (OHCU).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>5-hydroxyisourate + H2O = 5-hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:23736"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:18072"/>
            <dbReference type="ChEBI" id="CHEBI:58639"/>
            <dbReference type="EC" id="3.5.2.17"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="7">Homotetramer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 7">Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.</text>
    </comment>
    <dbReference type="EC" id="3.5.2.17" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65807.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670687.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00764"/>
    <dbReference type="EnsemblBacteria" id="CTQ65807">
        <property type="protein sequence ID" value="CTQ65807"/>
        <property type="gene ID" value="LAX5112_00764"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033971">
        <property type="term" value="F:hydroxyisourate hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006144">
        <property type="term" value="P:purine nucleobase metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd05822">
        <property type="entry name" value="TLP_HIUase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.180">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014306">
        <property type="entry name" value="Hydroxyisourate_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023418">
        <property type="entry name" value="Thyroxine_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000895">
        <property type="entry name" value="Transthyretin/HIU_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023416">
        <property type="entry name" value="Transthyretin/HIU_hydrolase_d"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036817">
        <property type="entry name" value="Transthyretin/HIU_hydrolase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023419">
        <property type="entry name" value="Transthyretin_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10395">
        <property type="entry name" value="PTHR10395"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00576">
        <property type="entry name" value="Transthyretin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00189">
        <property type="entry name" value="TRNSTHYRETIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49472">
        <property type="entry name" value="SSF49472"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02962">
        <property type="entry name" value="hdxy_isourate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00768">
        <property type="entry name" value="TRANSTHYRETIN_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00769">
        <property type="entry name" value="TRANSTHYRETIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 7 9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4 7" id="KW-0659">Purine metabolism</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TR_THY" evidence="8">
        <location>
            <begin position="5"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="8"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="46"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="114"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00002704"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022631"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR600895-51"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU361270"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00576"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ65807.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="117" mass="12990" checksum="E8849550E6308F68" modified="2015-12-09" version="1">MAGYLTTHVLDTAQGCPGRGIKIDLYRISGDSRIFVRSLVTNNDGRTDSHILPSEEFETGTYELEFHVGAYFDAAGISLPDPKFLDVVPLRFGMSEEAHYHVPLLVSPFSYSTYRGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUD9</accession>
    <name>A0A0M6ZUD9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Acetate operon repressor</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">iclR_1</name>
        <name evidence="6" type="ORF">LAX5112_00770</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
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            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65826.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670694.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00770"/>
    <dbReference type="EnsemblBacteria" id="CTQ65826">
        <property type="protein sequence ID" value="CTQ65826"/>
        <property type="gene ID" value="LAX5112_00770"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
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    </dbReference>
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        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029016">
        <property type="entry name" value="GAF-like_dom_sf"/>
    </dbReference>
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        <property type="entry name" value="Tscrpt_reg_IclR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005471">
        <property type="entry name" value="Tscrpt_reg_IclR_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09339">
        <property type="entry name" value="HTH_IclR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01614">
        <property type="entry name" value="IclR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00346">
        <property type="entry name" value="HTH_ICLR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51077">
        <property type="entry name" value="HTH_ICLR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51078">
        <property type="entry name" value="ICLR_ED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH iclR-type" evidence="4">
        <location>
            <begin position="30"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="domain" description="IclR-ED" evidence="5">
        <location>
            <begin position="92"/>
            <end position="275"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51077"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51078"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ65826.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="284" mass="30766" checksum="77074840A314B81C" modified="2015-12-09" version="1">MPERENDLIAGRKARGRPRAWDDKSGQNTIKSLDRAMAVFEHLSTQSGVSLSALSDQTGESTATLYRILFTLETRGLVEFDQAQQLWHIGPAAFIVGARFLRRTSLVERARPILRELMEETGETANLGIQKGDQVLFVSQVETHASIRAFFPPGSLSPLHASGIGKALLAFMPETQCEKILKSAKRERFTSYTLCDAGLLKADLAQAQTRGYSIDGEEKNLGMRCIAAPVFNHYGEIAAGLSISGPTSRLTEDKIQSLGSAVMNAAGTLTSALGGEPPIETSDQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUQ6</accession>
    <name>A0A0M6ZUQ6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative xanthine dehydrogenase subunit A</fullName>
            <ecNumber evidence="3">1.17.1.4</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">pucA_1</name>
        <name evidence="3" type="ORF">LAX5112_00823</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.17.1.4" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65972.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670730.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00823"/>
    <dbReference type="EnsemblBacteria" id="CTQ65972">
        <property type="protein sequence ID" value="CTQ65972"/>
        <property type="gene ID" value="LAX5112_00823"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004854">
        <property type="term" value="F:xanthine dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003777">
        <property type="entry name" value="XdhC_CoxI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027051">
        <property type="entry name" value="XdhC_Rossmann_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13478">
        <property type="entry name" value="XdhC_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02625">
        <property type="entry name" value="XdhC_CoxI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="XdhC_CoxI" evidence="1">
        <location>
            <begin position="28"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="domain" description="XdhC_C" evidence="2">
        <location>
            <begin position="140"/>
            <end position="274"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02625"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ65972.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="290" mass="30409" checksum="772363532DF05DBF" modified="2015-12-09" version="1">MKHSAPETLRAAQQASATDVSALAEQLRKDAEPYALATVVRTISVTAAKAGAKAVIAADGHIAGGWIGGGCARSAVIKAAKAAIEDGEPKLISLQPEDLLAELGVEAGDNRQGVQFAKNMCPSQGTMDIFVEPVLPRPKLVILGASPVAVALAQQGPNIGFECIAHASLEDLKTFPQECEVKDGFDIPENSNAERYLAVSTQGRGDLAALESALAANSKHIAFVGSHRKIAHLKSKLREKGISDESLERIDGPAGLDLGAITPEEIALSILAELVMVRRKGQRGADVHHI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUS4</accession>
    <name>A0A0M6ZUS4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Xanthine permease XanP</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">xanP</name>
        <name evidence="8" type="ORF">LAX5112_00765</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the nucleobase:cation symporter-2 (NCS2) (TC 2.A.40) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65810.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008195879.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00765"/>
    <dbReference type="EnsemblBacteria" id="CTQ65810">
        <property type="protein sequence ID" value="CTQ65810"/>
        <property type="gene ID" value="LAX5112_00765"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015205">
        <property type="term" value="F:nucleobase transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006043">
        <property type="entry name" value="NCS2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017588">
        <property type="entry name" value="UacT-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006042">
        <property type="entry name" value="Xan_ur_permease"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00860">
        <property type="entry name" value="Xan_ur_permease"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00801">
        <property type="entry name" value="ncs2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03173">
        <property type="entry name" value="pbuX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="29"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="64"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="91"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="119"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="146"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="186"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="212"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="255"/>
            <end position="276"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="330"/>
            <end position="355"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="367"/>
            <end position="387"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="399"/>
            <end position="416"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="428"/>
            <end position="448"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ65810.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="475" mass="48548" checksum="1881BEB70BA92A5A" modified="2015-12-09" version="1">MSNASIGSPEQLRDPNYTPPLAKAIPLGIQHVLAMFVSNVTPAIIVAGAAGFGFGSNSPDFPELLYLIQMSMLFAGVATLLQTITLGPVGAGLPIVQGTSFAFLPIMIPLVAGKGVDGLAAVFGGVIIGGMFHAVLGLFIGKIRFALPPLVTGLVVTMIGLSLVKVGIQYAAGGVPAIGTPEYGSLLNWSAALVVIFVTLGLKFYARGMLSVSAVLLGLIAGYIYALMTGMLTFDTIASSWSNASAFALPQPFKYGFEISAAAVIGFCLMGFVSAIETVGDVTGITKGGAGRDATDKEISGATYADGLGSTVAGLFGAFPNTSFSQNVGLIAMTGVMSRHVVTCGAVFLIICGLVPKVGGLIRTVPIEVLGGGVIVMFGMVVAAGVSMLSDVNWNRRNMVIFAIALTIGLGLKLDPGALQHMPDTARILLTTGLLPAAAIAIVLNLILPDELSEEATEEVSGGMSGHGKGSLPAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVK6</accession>
    <name>A0A0M6ZVK6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Hydantoin racemase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00656</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65503.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670606.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00656"/>
    <dbReference type="EnsemblBacteria" id="CTQ65503">
        <property type="protein sequence ID" value="CTQ65503"/>
        <property type="gene ID" value="LAX5112_00656"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0036361">
        <property type="term" value="F:racemase activity, acting on amino acids and derivatives"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006807">
        <property type="term" value="P:nitrogen compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015942">
        <property type="entry name" value="Asp/Glu/hydantoin_racemase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01177">
        <property type="entry name" value="Asp_Glu_race"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ65503.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="219" mass="22813" checksum="9D662F16927E7458" modified="2015-12-09" version="1">MTIYVINPNSSEHVTDGIDDAIAPMREVSPVPISCLTLKEGPPGIETQAHVDGVVGPLLELAGSLQGDASAFVVACFSDPGLAALREAHSVPVLGIAESAYLQAMMLGQRFGILSLGRTSIQRHIRYLGALGIRDRLAADLPLGLGVLDLADADRTIARLAEVGGTLRDQFGADVLITGCAGMAQYRTLLEEKTGLPVVDPCQAATAAAIGQLALRTCT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVV0</accession>
    <name>A0A0M6ZVV0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative enoyl-CoA hydratase echA8</fullName>
            <ecNumber evidence="2">4.2.1.17</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">echA8_1</name>
        <name evidence="2" type="ORF">LAX5112_00689</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the enoyl-CoA hydratase/isomerase family.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.17" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65593.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670827.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00689"/>
    <dbReference type="EnsemblBacteria" id="CTQ65593">
        <property type="protein sequence ID" value="CTQ65593"/>
        <property type="gene ID" value="LAX5112_00689"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004300">
        <property type="term" value="F:enoyl-CoA hydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029045">
        <property type="entry name" value="ClpP/crotonase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018376">
        <property type="entry name" value="Enoyl-CoA_hyd/isom_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001753">
        <property type="entry name" value="Enoyl-CoA_hydra/iso"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00378">
        <property type="entry name" value="ECH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52096">
        <property type="entry name" value="SSF52096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00166">
        <property type="entry name" value="ENOYL_COA_HYDRATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU003707"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65593.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="301" mass="33426" checksum="C21CFA2BC9CA03C9" modified="2015-12-09" version="1">MPAFSTLSIDLCPGNERVARLLLNRPERFNAVNDDTPREIRAAVEWAENNRDVHVIIVEGAGKGFCGGYDLTHYAENDADHPCQQESDPWDPMVDYAVMKRNTEDFMSLWRSRKPTIAKVHGAAVAGGSDIALCCDLLVMAEDARIGYMPTRVWGCPTTAMWTYRLGPARAKQLMFTGDLITGTTAAEWGLANISCPAGELDERTNALAARIAGVPSGHLAMHKMVVNQIMLTMGLEQAQMSATIFDGITRHNPEGLWFRRYAQTEGFKAAIDWRDSGRPIPEGDEARTLIREMDEKQQAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZW09</accession>
    <name>A0A0M6ZW09_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Phosphoserine phosphatase RsbU</fullName>
            <ecNumber evidence="4">3.1.3.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">rsbU_2</name>
        <name evidence="4" type="ORF">LAX5112_01151</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.3.3" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66945.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671002.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01151"/>
    <dbReference type="EnsemblBacteria" id="CTQ66945">
        <property type="protein sequence ID" value="CTQ66945"/>
        <property type="gene ID" value="LAX5112_01151"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0036424">
        <property type="term" value="F:L-phosphoserine phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004722">
        <property type="term" value="F:protein serine/threonine phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036457">
        <property type="entry name" value="PPM-type_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001932">
        <property type="entry name" value="PPM-type_phosphatase_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07228">
        <property type="entry name" value="SpoIIE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00331">
        <property type="entry name" value="PP2C_SIG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81606">
        <property type="entry name" value="SSF81606"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="31"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="446"/>
            <end position="465"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="3">
        <location>
            <begin position="467"/>
            <end position="519"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="518"/>
            <end position="563"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ66945.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="798" mass="87363" checksum="3F451CCDDDCF287C" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZW51</accession>
    <name>A0A0M6ZW51_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">TRAP-type C4-dicarboxylate transport system, small permease component</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">LAX5112_01171</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66995.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008195286.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01171"/>
    <dbReference type="EnsemblBacteria" id="CTQ66995">
        <property type="protein sequence ID" value="CTQ66995"/>
        <property type="gene ID" value="LAX5112_01171"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007387">
        <property type="entry name" value="TRAP_DctQ"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04290">
        <property type="entry name" value="DctQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="12"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="41"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="80"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="130"/>
            <end position="148"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ66995.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="165" mass="18128" checksum="6BD3CDECC4169428" modified="2015-12-09" version="1">MLDRLERIFVDVAVTATILLAVLIFADVVALNVFNASVPDTIIIVRELMVLAIIMPLAAATARRSHIAVEFVTNFLPDRVVNWFVVFGAAFGAVALIPLIWSAAHEFIYQWQTGNAFYGDLGLPQWPGRLAFVLGLVLCWIRLVLMLIGDAVSAIRGRVIITGTH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWC1</accession>
    <name>A0A0M6ZWC1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Glutamine transport ATP-binding protein GlnQ</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">glnQ_2</name>
        <name evidence="6" type="ORF">LAX5112_00751</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65773.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670676.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00751"/>
    <dbReference type="EnsemblBacteria" id="CTQ65773">
        <property type="protein sequence ID" value="CTQ65773"/>
        <property type="gene ID" value="LAX5112_00751"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015424">
        <property type="term" value="F:ABC-type amino acid transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030679">
        <property type="entry name" value="ABC_ATPase_HisP-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF039085">
        <property type="entry name" value="ABC_ATPase_HisP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="2"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="34"/>
            <end position="41"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ65773.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="240" mass="26295" checksum="FC968FEFCCA2A0DE" modified="2015-12-09" version="1">MIEIRGLEKYFGALQVLKGIDLDVAKGEVLSVIGASGSGKSTLLYCINGLEPIQKGSVVVDGTNVHDKATDINKLRQKLGMVFQQWNSFPHLTALENVALSPRIVKGKSRADAQEIAEQQLKHVGLADKLNVYPNALSGGQQQRLAIARALAMEPTYMLFDEATSALDPELVGEVLDTMRLLAEEGMTMICVTHEMGFARDVSDRVAYFHQGVMEEIGPPSQVFGDPQSEHTRKFLSNVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWR2</accession>
    <name>A0A0M6ZWR2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01262</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67199.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671097.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67199">
        <property type="protein sequence ID" value="CTQ67199"/>
        <property type="gene ID" value="LAX5112_01262"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="88"/>
            <end position="115"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67199.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="115" mass="12855" checksum="07751BEEC274965F" modified="2015-12-09" version="1">MNTKPNFNLDRTFFTVISALESGTIYQPEIDPDWNRSTVLEMAKEGQFETVLAIIESNPVEGGSRTIPAELIDDEIQIEARASQHRMHRFPNDEHRIGNFEAGTGSFGPYSGRAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXK1</accession>
    <name>A0A0M6ZXK1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Phosphoserine phosphatase RsbU</fullName>
            <ecNumber evidence="3">3.1.3.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">rsbU_1</name>
        <name evidence="3" type="ORF">LAX5112_01148</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.3.3" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66936.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ66936">
        <property type="protein sequence ID" value="CTQ66936"/>
        <property type="gene ID" value="LAX5112_01148"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0036424">
        <property type="term" value="F:L-phosphoserine phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004722">
        <property type="term" value="F:protein serine/threonine phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036457">
        <property type="entry name" value="PPM-type_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001932">
        <property type="entry name" value="PPM-type_phosphatase_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07228">
        <property type="entry name" value="SpoIIE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00331">
        <property type="entry name" value="PP2C_SIG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81606">
        <property type="entry name" value="SSF81606"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PPM-type phosphatase" evidence="2">
        <location>
            <begin position="91"/>
            <end position="310"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="15"/>
            <end position="42"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00331"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ66936.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="310" mass="33678" checksum="5F82C9E8E93521FA" modified="2015-12-09" version="1">MTDSFSSDSQTGGYSASMNDELETLRAELAELKAEHADLQLLYEATIEHGEAVEDQLAENNQLLLDTQSRLEAELADAGRYVLSILPEPRSEGPKADWLLVPSTELGGDSFGYHDLDGDHFAIYLIDVCGHGVGAALLSVSIINVLRSCALPETDFRIPSDVLFKLNNAFPMERQNNMFFTIWYGVFQRSTGKLSYASGGHPAAVLLPAVKDEGAFSLIGTSEGMVIGAIEDMTFDQSEVSVRSGDRLLVLSDGTYEVDDLEGDVLSLEGLANAALAANGSIPSHILEWVQKKSGQSELPDDYSMIEFQF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXN6</accession>
    <name>A0A0M6ZXN6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Extracytoplasmic solute receptor protein YiaO</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">yiaO_3</name>
        <name evidence="4" type="ORF">LAX5112_01164</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the bacterial solute-binding protein 7 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66976.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01164"/>
    <dbReference type="EnsemblBacteria" id="CTQ66976">
        <property type="protein sequence ID" value="CTQ66976"/>
        <property type="gene ID" value="LAX5112_01164"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071702">
        <property type="term" value="P:organic substance transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.190.170">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018389">
        <property type="entry name" value="DctP_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038404">
        <property type="entry name" value="TRAP_DctP_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33376">
        <property type="entry name" value="PTHR33376"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03480">
        <property type="entry name" value="DctP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0675">Receptor</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809180" evidence="3">
        <location>
            <begin position="24"/>
            <end position="328"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ66976.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="328" mass="35424" checksum="C88776F5EB5AE919" modified="2015-12-09" version="1">MTMKLTSAVAAAALLGSAFAANATELRLSHQWSTSDVRHKVAEIVANEVAAADVDLEIKIFPSKSLFKPREQYKPLSRGQLDMTVFPLSYAGGQQPAYNLTLMPGLVKNHDHAARLNESPFMGKIEEIMAGDDVMVLVHGYLAGGFVGKDKCITAPEHVKGQQTRAAGKAFEQMLAGAGASIASMASSEIYNAMQTGVLTAANTSSSSFVSYRIYEQVKCYTPASDFALWFMYQPLLMNKSAYDGLNDAQKAALQAGAAKAEAFYLEEAKKQDAASADIFAENGVEIAQMSQEEFDAWRALAQETSYKAFIEQTPGGQELLDMALSVQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXS2</accession>
    <name>A0A0M6ZXS2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Demethylmenaquinone methyltransferase</fullName>
            <ecNumber evidence="2">2.1.1.163</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ubiE_1</name>
        <name evidence="2" type="ORF">LAX5112_01150</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.1.1.163" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66942.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671001.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01150"/>
    <dbReference type="EnsemblBacteria" id="CTQ66942">
        <property type="protein sequence ID" value="CTQ66942"/>
        <property type="gene ID" value="LAX5112_01150"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043770">
        <property type="term" value="F:demethylmenaquinone methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102094">
        <property type="term" value="F:S-adenosylmethionine:2-demethylmenaquinol methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102955">
        <property type="term" value="F:S-adenosylmethionine:2-demethylmenaquinol-7 methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102027">
        <property type="term" value="F:S-adenosylmethionine:2-demethylquinol-8 methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013216">
        <property type="entry name" value="Methyltransf_11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08241">
        <property type="entry name" value="Methyltransf_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Methyltransf_11" evidence="1">
        <location>
            <begin position="165"/>
            <end position="262"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08241"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66942.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="392" mass="44483" checksum="EFF6482BBD71295A" modified="2015-12-09" version="1">MTSPATGHAFDWRFNENDQEFALQGCLRPQSADELNGCMEALDSATSTVKGRLYLNVRRLVRMNNVAFQAIARHLVDTCINRPDLNIQVTTSSCVGWSTRKFQALESANQNITVSEYDSDFYPGQTFLEEGGFIPILRTQTKLTWHHEREILGRHGLKPGMQMADICCGIGDFAVLAQKEYELGRLVALDHSKSSLDYARKVAAEFGVKGVEYVYGDASEMLLESNQFDFVTCRHALQVFDHPEEILKELYRICKPGGRVYITNEKNSHCLGEPRSETIQWTYNEVAKLWDHFDMDIELGPKSRRYLADGGFEDIKMESFMVTNLDGNPQDFADIIQSWENVYAGQMAVERGDSPEQIARFRQGFQDHIFAALHPKGYAGWPIWVASGRKPL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXU4</accession>
    <name>A0A0M6ZXU4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01209</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67091.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671048.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67091">
        <property type="protein sequence ID" value="CTQ67091"/>
        <property type="gene ID" value="LAX5112_01209"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67091.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="108" mass="11465" checksum="D6D93B6FC73E2C4D" modified="2015-12-09" version="1">MTLNAGVLIPSELAAGVQTDITGGGMASDDAGTFTINFCNDSDTDANLEAVYLTAGEAPGNQHKIHPAFIVAKRGWDLIQPVRIEAGWKLFIQSNIPISVQLIGDRRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYC3</accession>
    <name>A0A0M6ZYC3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Nitrile hydratase accessory protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01326</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67317.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01326"/>
    <dbReference type="EnsemblBacteria" id="CTQ67317">
        <property type="protein sequence ID" value="CTQ67317"/>
        <property type="gene ID" value="LAX5112_01326"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018822">
        <property type="term" value="F:nitrile hydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.472.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042262">
        <property type="entry name" value="CN_hydtase_beta_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024690">
        <property type="entry name" value="CN_hydtase_beta_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008990">
        <property type="entry name" value="Elect_transpt_acc-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023808">
        <property type="entry name" value="Nitrile_Hydratase_acc_put"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02211">
        <property type="entry name" value="NHase_beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50090">
        <property type="entry name" value="SSF50090"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03889">
        <property type="entry name" value="nitrile_acc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NHase_beta" evidence="1">
        <location>
            <begin position="19"/>
            <end position="96"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67317.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="115" mass="12489" checksum="74175058E41B5CDB" modified="2015-12-09" version="1">MTLPDPVLATPKLPLDQDGGPVFSEPWEARVFAMTVKAHENGVFSWSEWAETLGAELAKDGDGACLGYYDHWLNAFEALLSRKGVAAAGQLQGLRDAWDQAALATPHGEPIELKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYK4</accession>
    <name>A0A0M6ZYK4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Methylmalonyl-CoA mutase large subunit</fullName>
            <ecNumber evidence="7">5.4.99.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">mutB</name>
        <name evidence="7" type="ORF">LAX5112_01558</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>adenosylcob(III)alamin</name>
            <dbReference type="ChEBI" id="CHEBI:18408"/>
        </cofactor>
    </comment>
    <dbReference type="EC" id="5.4.99.2" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67888.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671351.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01558"/>
    <dbReference type="EnsemblBacteria" id="CTQ67888">
        <property type="protein sequence ID" value="CTQ67888"/>
        <property type="gene ID" value="LAX5112_01558"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031419">
        <property type="term" value="F:cobalamin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004494">
        <property type="term" value="F:methylmalonyl-CoA mutase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006159">
        <property type="entry name" value="Acid_CoA_mut_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016176">
        <property type="entry name" value="Cbl-dep_enz_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006158">
        <property type="entry name" value="Cobalamin-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036724">
        <property type="entry name" value="Cobalamin-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006099">
        <property type="entry name" value="MeMalonylCoA_mutase_a/b_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006098">
        <property type="entry name" value="MMCoA_mutase_a_cat"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02310">
        <property type="entry name" value="B12-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01642">
        <property type="entry name" value="MM_CoA_mutase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51703">
        <property type="entry name" value="SSF51703"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52242">
        <property type="entry name" value="SSF52242"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00640">
        <property type="entry name" value="acid_CoA_mut_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00641">
        <property type="entry name" value="acid_CoA_mut_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51332">
        <property type="entry name" value="B12_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00544">
        <property type="entry name" value="METMALONYL_COA_MUTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0846">Cobalamin</keyword>
    <keyword evidence="5" id="KW-0170">Cobalt</keyword>
    <keyword evidence="4 7" id="KW-0413">Isomerase</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="B12-binding" evidence="6">
        <location>
            <begin position="583"/>
            <end position="715"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001922"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022628"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023285"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51332"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ67888.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="721" mass="78065" checksum="05383F7CAFEA1C61" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYQ5</accession>
    <name>A0A0M6ZYQ5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Bacteriophage head-tail adaptor</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01388</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67431.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671191.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67431">
        <property type="protein sequence ID" value="CTQ67431"/>
        <property type="gene ID" value="LAX5112_01388"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.10.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008767">
        <property type="entry name" value="Phage_SPP1_head-tail_adaptor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038666">
        <property type="entry name" value="SSP1_head-tail_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05521">
        <property type="entry name" value="Phage_H_T_join"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67431.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="106" mass="11870" checksum="9FF6807327AE7ECB" modified="2015-12-09" version="1">MRAGDYRVPVVLQRPLETRSASGEITTSYEAAGSVFAALRLKSQSERFAESRTASSKTWEIRLRPFPGFSGGWRVLSGTRVFRVLSVCDPTGRRRELLCEAEEETT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYU9</accession>
    <name>A0A0M6ZYU9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Putative HTH-type transcriptional regulator YdcR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">ydcR_1</name>
        <name evidence="4" type="ORF">LAX5112_01573</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">In the C-terminal section; belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67925.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671361.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01573"/>
    <dbReference type="EnsemblBacteria" id="CTQ67925">
        <property type="protein sequence ID" value="CTQ67925"/>
        <property type="gene ID" value="LAX5112_01573"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009058">
        <property type="term" value="P:biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07377">
        <property type="entry name" value="WHTH_GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004839">
        <property type="entry name" value="Aminotransferase_I/II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000524">
        <property type="entry name" value="Tscrpt_reg_HTH_GntR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00155">
        <property type="entry name" value="Aminotran_1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00392">
        <property type="entry name" value="GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00345">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50949">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH gntR-type" evidence="3">
        <location>
            <begin position="13"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="91"/>
            <end position="111"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005384"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ67925.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="506" mass="54905" checksum="7E22C1746A326EC4" modified="2015-12-09" version="1">MTNWLPQIPDGQGPIYLRLADQISADIASGALTAGTKLPPQRDLAYDLGVTVGTIGRAYATIRQRGLVNGEVGRGTYVLGSAEPIQLQESTKPNLDAPAGNPAPSAPAVHQRTGDTSWVQGAMQPPKDRAFAGTRIAVPHESSIRFDSTSAPEIGQAKLIAQITLDITRDHPHEIASYTRAVPPDWRAAGKIWLSRGGWEPDEGSIVPTTGAQAAIMSIIAATTAPGDRIAFEDLTYSSIARGAALSGRRPVLVERDEEGPLPEDLARVCAQTHPRILFLMPTMHNPTTGFMSETRRHELIEVARQHNLWIIEDEVYGSLRDTSVPPVVSLAPERTFHVGSLSKSVTAGVRGGWLSSPQSYAQRIYTAHKMLTGGISFLLSELSSRLILSGAASDFREKVGAEIAARHALVRQHLNPFEYRSAADCPFLWLKVPEPWNPGTFKAAAAAENVLVDDEDEFKPGRTGKVYHCIRIGFSNPLTRDQTVEGLVAVRDLLNDNCACYDSFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZM5</accession>
    <name>A0A0M6ZZM5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 13">Flagellar biosynthetic protein FlhB</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="primary">flhB_3</name>
        <name evidence="13" type="synonym">flhB</name>
        <name evidence="15" type="ORF">LAX5112_01663</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="12 13">Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="13">Cell membrane</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 13">Belongs to the type III secretion exporter family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68175.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008191652.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01663"/>
    <dbReference type="EnsemblBacteria" id="CTQ68175">
        <property type="protein sequence ID" value="CTQ68175"/>
        <property type="gene ID" value="LAX5112_01663"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044780">
        <property type="term" value="P:bacterial-type flagellum assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009306">
        <property type="term" value="P:protein secretion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1690.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006136">
        <property type="entry name" value="FlhB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006135">
        <property type="entry name" value="T3SS_substrate_exporter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029025">
        <property type="entry name" value="T3SS_substrate_exporter_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30531">
        <property type="entry name" value="PTHR30531"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01312">
        <property type="entry name" value="Bac_export_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00950">
        <property type="entry name" value="TYPE3IMSPROT"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF160544">
        <property type="entry name" value="SSF160544"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00328">
        <property type="entry name" value="flhB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 13" id="KW-1005">Bacterial flagellum biogenesis</keyword>
    <keyword evidence="11 13" id="KW-1006">Bacterial flagellum protein export</keyword>
    <keyword evidence="5 13" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="15" id="KW-0966">Cell projection</keyword>
    <keyword evidence="15" id="KW-0969">Cilium</keyword>
    <keyword evidence="15" id="KW-0282">Flagellum</keyword>
    <keyword evidence="10 13" id="KW-0472">Membrane</keyword>
    <keyword evidence="8 13" id="KW-0653">Protein transport</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 13" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 13" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4 13" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="37"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="90"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="150"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="189"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="14">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="14">
        <location>
            <begin position="10"/>
            <end position="29"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010690"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00021622"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022795"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023225"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00025078"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU364091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="CTQ68175.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="359" mass="39698" checksum="16556730848531AF" modified="2015-12-09" version="1">MADETDDSEKTEDPTQKRLKDAHDKGDVPKSQEVSTWFTLAGATLMIAIMAPGAAASLGNLLKGYIEHAHQIPVDGYALKALWRDTGQSVALIVGLPLLALVVMAVFGNLIQHQPLLTAETIKPKLSKVSPLSGFKRLFSSESLVNFAKGMVKILVVGAVMVAVLWPHRDEAEIMIFADEMIILEEARILILQVLAAILAVMTVVAAADFVYQKNKWFNKQKMSLKEVKEEFKQTEGDPHVKGKIRQLRMERSRKRMMSAVPAATVVVTNPTHYAVALQYEEGMGAPLCVAKGTDALALRIRDVAKEHEVPVIENPPLARALYASVEIEQEVPEEHFKAVAEVIGFVFRMRKRAAWRAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1Z0</accession>
    <name>A0A0M7A1Z0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="13">ATP-binding/permease protein CydD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">cydD</name>
        <name evidence="13" type="ORF">LAX5112_01909</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68849.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01909"/>
    <dbReference type="EnsemblBacteria" id="CTQ68849">
        <property type="protein sequence ID" value="CTQ68849"/>
        <property type="gene ID" value="LAX5112_01909"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008643">
        <property type="term" value="P:carbohydrate transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042883">
        <property type="term" value="P:cysteine transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1560.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011527">
        <property type="entry name" value="ABC1_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036640">
        <property type="entry name" value="ABC1_TM_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014216">
        <property type="entry name" value="ABC_transptr_CydD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039421">
        <property type="entry name" value="Type_1_exporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24221">
        <property type="entry name" value="PTHR24221"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00664">
        <property type="entry name" value="ABC_membrane"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90123">
        <property type="entry name" value="SSF90123"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02857">
        <property type="entry name" value="CydD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50929">
        <property type="entry name" value="ABC_TM1F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 8 13" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="4 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0762">Sugar transport</keyword>
    <keyword evidence="3 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 10" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="54"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="94"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="179"/>
            <end position="195"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="279"/>
            <end position="304"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="310"/>
            <end position="331"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="12">
        <location>
            <begin position="67"/>
            <end position="350"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="11">
        <location>
            <begin position="390"/>
            <end position="613"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="9">
        <location>
            <begin position="1"/>
            <end position="16"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="422"/>
            <end position="429"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022597"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="CTQ68849.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="613" mass="64005" checksum="37AB7A8F2C7BB22C" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2B4</accession>
    <name>A0A0M7A2B4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02034</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69228.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671720.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ69228">
        <property type="protein sequence ID" value="CTQ69228"/>
        <property type="gene ID" value="LAX5112_02034"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="61"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="100"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="131"/>
            <end position="148"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69228.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="169" mass="19082" checksum="6B16F059CF42331C" modified="2015-12-09" version="1">MAILRQPVTAVVIAFWFCFWLLNGLDKFFARQDIGFVHWWGNHRVEKFTMYFDRLDIDPGFVTATLIFAGIVEFFAAALFLVAGIRLVKNQPGVAYRTDLAIAASIAVFLGFAIFDVVVGDRAELLEHSTYVGVLLVSFLAVAAESFFQHLRDLDSNSTINRRYPPELN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2L5</accession>
    <name>A0A0M7A2L5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02065</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69308.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02065"/>
    <dbReference type="EnsemblBacteria" id="CTQ69308">
        <property type="protein sequence ID" value="CTQ69308"/>
        <property type="gene ID" value="LAX5112_02065"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021727">
        <property type="entry name" value="DUF3299"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11736">
        <property type="entry name" value="DUF3299"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ69308.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="260" mass="28683" checksum="CCC227F4B439C0E7" modified="2015-12-09" version="1">MQVRVERARDYLLMAGSTPIGLRRATTAFVYAALTFAIAAGPAAAITPIDWPDLKDPAASQYEDPFEALYLSELRSLAAVYRIRNGLKSGGLTLEERTRLERRLNDEEAKLAAAGIQTDQLLAQRDMVARRRAEARLKGNSDLAGKDVAITGYVIPVLDETGAAKYGYLVSGYGMCSHVPAPAPNQIIFYRLEEEWAEAELYKPVLLQGRLDLNVSRQTINLLDGDVTITASFGMDVTDIRALEPQKSDVRGRGFRSFTR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2X1</accession>
    <name>A0A0M7A2X1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 5">Dihydrofolate reductase</fullName>
            <ecNumber evidence="3 5">1.5.1.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">dhfrIII</name>
        <name evidence="7" type="ORF">LAX5112_01621</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4 5">Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>(6S)-5,6,7,8-tetrahydrofolate + NADP(+) = 7,8-dihydrofolate + H(+) + NADPH</text>
            <dbReference type="Rhea" id="RHEA:15009"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57451"/>
            <dbReference type="ChEBI" id="CHEBI:57453"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="EC" id="1.5.1.3"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1 5">Cofactor biosynthesis; tetrahydrofolate biosynthesis; 5,6,7,8-tetrahydrofolate from 7,8-dihydrofolate: step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the dihydrofolate reductase family.</text>
    </comment>
    <dbReference type="EC" id="1.5.1.3" evidence="3 5"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68064.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671394.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01621"/>
    <dbReference type="EnsemblBacteria" id="CTQ68064">
        <property type="protein sequence ID" value="CTQ68064"/>
        <property type="gene ID" value="LAX5112_01621"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00077">
        <property type="reaction ID" value="UER00158"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004146">
        <property type="term" value="F:dihydrofolate reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050661">
        <property type="term" value="F:NADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006545">
        <property type="term" value="P:glycine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006730">
        <property type="term" value="P:one-carbon metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046654">
        <property type="term" value="P:tetrahydrofolate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd00209">
        <property type="entry name" value="DHFR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.430.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012259">
        <property type="entry name" value="DHFR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024072">
        <property type="entry name" value="DHFR-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001796">
        <property type="entry name" value="DHFR_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48069">
        <property type="entry name" value="PTHR48069"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00186">
        <property type="entry name" value="DHFR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000194">
        <property type="entry name" value="DHFR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53597">
        <property type="entry name" value="SSF53597"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51330">
        <property type="entry name" value="DHFR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0521">NADP</keyword>
    <keyword evidence="5" id="KW-0554">One-carbon metabolism</keyword>
    <keyword evidence="5 7" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DHFR" evidence="6">
        <location>
            <begin position="3"/>
            <end position="168"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004903"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009539"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012856"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00025067"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRNR" id="PIRNR000194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51330"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ68064.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="169" mass="18269" checksum="371CE527A126ED3C" modified="2015-12-09" version="1">MSEIVVIAAVAKNGIIGADNDMPWRLSSDLKRFKAMTLGKPVIMGRKTFLSFGGKPLPGRPHIVISRDPEYKPGGAEAATSLQCAIDRAREIAADTSADEIAIIGGGQIYAQAMDLADRLEITEVAAEPIGDTQFPEIDTAIWSETARVSGEQTEKDSAPFTFVTYRRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A395</accession>
    <name>A0A0M7A395_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01673</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68203.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671434.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01673"/>
    <dbReference type="EnsemblBacteria" id="CTQ68203">
        <property type="protein sequence ID" value="CTQ68203"/>
        <property type="gene ID" value="LAX5112_01673"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.60.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038076">
        <property type="entry name" value="MgtE_N_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="43"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="210"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="102"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="210"/>
            <end position="226"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ68203.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="241" mass="25612" checksum="9AC42CD18C4FA6C7" modified="2015-12-09" version="1">MNLRLLPLLGVAASALFGLKLLGLVVGPETGSLPINGAIAQESTEAAADGGETPPAPADGVAQAPGTVPPPAQPVLPDSLEIGGSAAERAVLESLGKRRQNLQKQEGQLDLRERLLQATEERIEQRVEELKLLEARIGAAVEEKKQQEENEIAGLVTMYENMKPKDAARIFDRLSLPILLKVVRQMKPRKMADILARMSPDAAEQLTVAIASQSSTPPQPEAQPVQAQAPTGGILPKIPSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3H3</accession>
    <name>A0A0M7A3H3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Flagellar basal-body rod protein FlgF</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">flgG_1</name>
        <name evidence="7" type="ORF">LAX5112_01677</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="4">The basal body constitutes a major portion of the flagellar organelle and consists of five rings (E,L,P,S, and M) mounted on a central rod. The rod consists of about 26 subunits of FlgG in the distal portion, and FlgB, FlgC and FlgF are thought to build up the proximal portion of the rod with about 6 subunits each.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 4">Bacterial flagellum basal body</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 4">Belongs to the flagella basal body rod proteins family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68214.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008196245.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01677"/>
    <dbReference type="EnsemblBacteria" id="CTQ68214">
        <property type="protein sequence ID" value="CTQ68214"/>
        <property type="gene ID" value="LAX5112_01677"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030694">
        <property type="term" value="C:bacterial-type flagellum basal body, rod"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071973">
        <property type="term" value="P:bacterial-type flagellum-dependent cell motility"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001444">
        <property type="entry name" value="Flag_bb_rod_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019776">
        <property type="entry name" value="Flagellar_basal_body_rod_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020013">
        <property type="entry name" value="Flagellar_FlgE/F/G"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010930">
        <property type="entry name" value="Flg_bb/hook_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037925">
        <property type="entry name" value="FlgE/F/G-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012836">
        <property type="entry name" value="FlgF"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00460">
        <property type="entry name" value="Flg_bb_rod"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06429">
        <property type="entry name" value="Flg_bbr_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF117143">
        <property type="entry name" value="SSF117143"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03506">
        <property type="entry name" value="FlgEFG_subfam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02490">
        <property type="entry name" value="flgF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00588">
        <property type="entry name" value="FLAGELLA_BB_ROD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0975">Bacterial flagellum</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Flg_bb_rod" evidence="5">
        <location>
            <begin position="7"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="domain" description="Flg_bbr_C" evidence="6">
        <location>
            <begin position="171"/>
            <end position="239"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009677"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023143"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU362116"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00460"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF06429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ68214.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="246" mass="27073" checksum="AC3F04DA58ACFA73" modified="2015-12-09" version="1">MENVHLIGLSRQSALRNQLDVVANNMANINTTGFKSQRLLFEEYLMPVAEATEFQTPDETLSYVLDYQSITDFDTGAFKMTGNDLDLAIEGEGFFVVQMGDGTEAYTRDGAFVIDQNGQLVTSDGRPVMTTGGPITFSAEDGSVEIAKDGTISTELGIRGVIRVASFEDPQELEKQGDNLYRGENPGIPQRFNVVQGALERSNVEGVYQVTQLIEVTRAYESITKMLKDVNDLRQQAIQVLGKLEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3S2</accession>
    <name>A0A0M7A3S2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Type III effector pipB2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">pipB2_3</name>
        <name evidence="1" type="ORF">LAX5112_01995</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69132.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01995"/>
    <dbReference type="EnsemblBacteria" id="CTQ69132">
        <property type="protein sequence ID" value="CTQ69132"/>
        <property type="gene ID" value="LAX5112_01995"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001646">
        <property type="entry name" value="5peptide_repeat"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00805">
        <property type="entry name" value="Pentapeptide"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13599">
        <property type="entry name" value="Pentapeptide_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ69132.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="273" mass="29642" checksum="A3680B9C9B0869BC" modified="2015-12-09" version="1">MKKSVFSFLAAGAVIVTLAPQTRAMELDPRVPQILEDGGCPRCDLSLATLRGMKLEGADFHRTNLREVDLKEAVMPRSNFERSDFRRTEAERADFSASDFAGASMRAVDLEKSNLNSSIFRDADLRDADLNAAVMTGSTFEGADLRNVTLIRAVAQNTSFKSAKLDNANLERMDLLNSVFQGARMRNVKLDRAQAVNADFSGADLTGARLVSTNLSGANLTDVDFDGALLRRTRLKGADLTGASNLDPSRIIDACGDENTKLPDGITLEPCSY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A470</accession>
    <name>A0A0M7A470_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02032</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69226.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671718.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ69226">
        <property type="protein sequence ID" value="CTQ69226"/>
        <property type="gene ID" value="LAX5112_02032"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="44"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="75"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="105"/>
            <end position="122"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69226.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="123" mass="12941" checksum="F6402069346FA49A" modified="2015-12-09" version="1">MNIFFASAGGLAAIVCLIHTFLGGRAIAEPLLNAPGLHPVPKLTTYYCWHIVTITLAVIAGMFGYAALFAGGTDLGWVATILTFGYCVLGLAVPVFKNQAFKDMPQGWLFLPIVILGALGGSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5E5</accession>
    <name>A0A0M7A5E5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Ketosteroid isomerase-related protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01907</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68844.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671680.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ68844">
        <property type="protein sequence ID" value="CTQ68844"/>
        <property type="gene ID" value="LAX5112_01907"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032710">
        <property type="entry name" value="NTF2-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037401">
        <property type="entry name" value="SnoaL-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12680">
        <property type="entry name" value="SnoaL_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54427">
        <property type="entry name" value="SSF54427"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0413">Isomerase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SnoaL-like" evidence="1">
        <location>
            <begin position="7"/>
            <end position="114"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12680"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68844.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="134" mass="15186" checksum="B54D251AF8DDC7BE" modified="2015-12-09" version="1">MLEKEAVRALFKNLETGHGDQFFNRVREDVDWTVMGTHPLAGHYLSKADFHSHTFTRLNKVLQDGILLSVVDIFVDGDVAIVELRAISTANNGKPFDNRYCWVCSFDADDMICKVRAYLDSAMVAQLFEENAEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5E9</accession>
    <name>A0A0M7A5E9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Ribonuclease Z</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01947</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68953.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671633.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ68953">
        <property type="protein sequence ID" value="CTQ68953"/>
        <property type="gene ID" value="LAX5112_01947"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.15.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001279">
        <property type="entry name" value="Metallo-B-lactamas"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036866">
        <property type="entry name" value="RibonucZ/Hydroxyglut_hydro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006311">
        <property type="entry name" value="TAT_signal"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00753">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00849">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56281">
        <property type="entry name" value="SSF56281"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809455" evidence="1">
        <location>
            <begin position="40"/>
            <end position="332"/>
        </location>
    </feature>
    <feature type="domain" description="Lactamase_B" evidence="2">
        <location>
            <begin position="101"/>
            <end position="305"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ68953.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="332" mass="35300" checksum="171F90D506C0B2F3" modified="2015-12-09" version="1">MTVETISMNRRGFLGGAMTGGAALGAASALSLVPATAHAAAPLAGSPMAGALRRKVGNFEVTALLDGYLQLGPELIVGYEEETAAKLRKAAFIESQALTGPVNAYLVNTGDKLVLIDAGTSDKMGPTLGHLGSALSAAGVTPEQIDAVLITHMHPDHLFGVLTPTGEKAFPNAELLLPELDNIFWYDDAAMNAAPEQFKPFFLGARASADAYKSTQTLFNPGKEVFPGITAKALPGHTPGHVGFVIESNGEQLIIAADIIHATTYQFENPEWAIAFDIDPAQAIETRKKFFDEISADRVMFAGMHIPFPGFGYLAKQGDGYRFVAADWPYTF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6X4</accession>
    <name>A0A0M7A6X4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Isoquinoline 1-oxidoreductase subunit alpha</fullName>
            <ecNumber evidence="3">1.3.99.16</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">iorA_1</name>
        <name evidence="3" type="ORF">LAX5112_02130</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.3.99.16" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69483.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671788.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02130"/>
    <dbReference type="EnsemblBacteria" id="CTQ69483">
        <property type="protein sequence ID" value="CTQ69483"/>
        <property type="gene ID" value="LAX5112_02130"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051537">
        <property type="term" value="F:2 iron, 2 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047121">
        <property type="term" value="F:isoquinoline 1-oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00207">
        <property type="entry name" value="fer2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002888">
        <property type="entry name" value="2Fe-2S-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036884">
        <property type="entry name" value="2Fe-2S-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036010">
        <property type="entry name" value="2Fe-2S_ferredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001041">
        <property type="entry name" value="2Fe-2S_ferredoxin-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006058">
        <property type="entry name" value="2Fe2S_fd_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012675">
        <property type="entry name" value="Beta-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00111">
        <property type="entry name" value="Fer2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01799">
        <property type="entry name" value="Fer2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47741">
        <property type="entry name" value="SSF47741"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54292">
        <property type="entry name" value="SSF54292"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00197">
        <property type="entry name" value="2FE2S_FER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51085">
        <property type="entry name" value="2FE2S_FER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="2Fe-2S ferredoxin-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ69483.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="150" mass="16340" checksum="09FF9450FECF5300" modified="2015-12-09" version="1">MTKFILNSRPVEYTNPPEEMLLLILRDTANLKGTKYGCGTAMCGACTVHVDGEAMFSCQMSLADVEGADVTTIEGLSEDGSHPVQKAWIEEQVPQCGYCQSGQIMRAAALLAENPQPSREEIVDTMSANLCRCGTYNRIFKAVERAAKEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A740</accession>
    <name>A0A0M7A740_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Putative relative of glutathione S-transferase, MAPEG superfamily</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">LAX5112_02437</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70262.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672040.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02437"/>
    <dbReference type="EnsemblBacteria" id="CTQ70262">
        <property type="protein sequence ID" value="CTQ70262"/>
        <property type="gene ID" value="LAX5112_02437"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.550">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023352">
        <property type="entry name" value="MAPEG-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001129">
        <property type="entry name" value="Membr-assoc_MAPEG"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01124">
        <property type="entry name" value="MAPEG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161084">
        <property type="entry name" value="SSF161084"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 4" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="1 4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2 4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="6"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="80"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="106"/>
            <end position="127"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ70262.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="128" mass="14394" checksum="0231C961EEFE2DE2" modified="2015-12-09" version="1">MTQILLPVTITFTSLLAISLIPLTGWIGLRRDKIGGVFRGDGDDATLFKRIRIHANLMENAPVFILVLGASEMVGLGQTWLWLAVAVFLIGRVLHFILFDSRTRGFAMLVTLLPGMLMGFWLLLRIWR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A880</accession>
    <name>A0A0M7A880_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Phytase-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02272</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69834.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671888.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02272"/>
    <dbReference type="EnsemblBacteria" id="CTQ69834">
        <property type="protein sequence ID" value="CTQ69834"/>
        <property type="gene ID" value="LAX5112_02272"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027372">
        <property type="entry name" value="Phytase-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014567">
        <property type="entry name" value="UCP031900"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13449">
        <property type="entry name" value="Phytase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF031900">
        <property type="entry name" value="UCP031900"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809190" description="Phytase-like domain-containing protein" evidence="1">
        <location>
            <begin position="30"/>
            <end position="344"/>
        </location>
    </feature>
    <feature type="domain" description="Phytase-like" evidence="2">
        <location>
            <begin position="76"/>
            <end position="327"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13449"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ69834.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="344" mass="37402" checksum="5A6548B37F38A045" modified="2015-12-09" version="1">MSAFFSKFIRTAAAGLAAAVLSFSAPVSAESLLDEAKQVRVKTRPIETFHIGHSNTEFGKLTFLGGFEILASDRKTGGLSGVISLDDGNRLLAVTDNGHWVAATVEQTDEGAPTGLSDLRYAVLLGADGKSLRARWGHDTEALTLNTTGLYVSAERNHAVYHYEWPLLTGDERMLGQLSLPKALDRLPRNTGIEALAAGPAGGLLDGKLIAISETTPSDEHDFLGFILGPDGAEEFSIKRNDRFDITDAAFLPDGDLLLMERRFNMKDLIGLRLRRLPGSDLKAGAALDGEILLEADFNYQIDNMEALAVHQNAVGDTILTLLSDNNRSLLQRTLLLRFRLNEQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8M1</accession>
    <name>A0A0M7A8M1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Killing trait</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02666</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70957.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008188621.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02666"/>
    <dbReference type="EnsemblBacteria" id="CTQ70957">
        <property type="protein sequence ID" value="CTQ70957"/>
        <property type="gene ID" value="LAX5112_02666"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021070">
        <property type="entry name" value="Killing_trait_RebB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11747">
        <property type="entry name" value="RebB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ70957.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="76" mass="7838" checksum="0AC79CE232106F76" modified="2015-12-09" version="1">MADLVNAQITDAVTQTNVKVVAEAPAQAIASLYQVASHASGLSIQNAVHSQQAMNQITTAVVSKACQLIMDIGETG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9E8</accession>
    <name>A0A0M7A9E8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Cytochrome c biogenesis protein CcmA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_02695</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71036.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672253.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ71036">
        <property type="protein sequence ID" value="CTQ71036"/>
        <property type="gene ID" value="LAX5112_02695"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003959">
        <property type="entry name" value="ATPase_AAA_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014555">
        <property type="entry name" value="RecF-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13304">
        <property type="entry name" value="AAA_21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF029347">
        <property type="entry name" value="RecF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ATPase_AAA_core" evidence="3">
        <location>
            <begin position="273"/>
            <end position="348"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF13304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ71036.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="385" mass="41957" checksum="28D8FE12C79411D7" modified="2015-12-09" version="1">MLLTFAVSGYRSLRDLILPLDRITLITGANGSGKSSLYRSIRLLAEVAQGRAIASLASEGGLNSTLWAGPETVSRAMKRGEVPVQGTVRKGTVALKLGFADEDYGYAIDLGLPADAGRSYFSMDPEIKCEALWAGEALSRSNEIAGRNGPSVRVLNQQGQRLPVVQNLARFDSMMTHAADPKDGLELLVLRERMRAWRFYDHLRTDREAPARFPKIGTRTPALSADGADLAAALQTILEIGDEVALAEAIDDAFPGAEIEITVNEGYFELLMRQKGLLRSLRAAELSDGTLRYLLLTAALLSPRPAPLIVLNEPETSLHPSLLEPLARLISKAAEKTQVLVVSHAEPLVNALAGERGCLHHHLHKELGETQVADAEPPRWRWPSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9I7</accession>
    <name>A0A0M7A9I7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02854</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71529.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672376.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ71529">
        <property type="protein sequence ID" value="CTQ71529"/>
        <property type="gene ID" value="LAX5112_02854"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0830">Ubiquinone</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ71529.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="261" mass="29613" checksum="3EE023ACC4E68878" modified="2015-12-09" version="1">MTDTTNELTVHSQYLVKKLSNSKQNLYGTVKFDTVSRKIKSWAKGRTETPKILDIGCSTSISKEYLAATGLEFEYCGADYEAAFQPDIVLDATKLSERKEDLPWRPDVITLLDVLEHLPGKAEAIESTMRQCCEVVAPGGLVLAVVPQLYRLDRLKFGHLHYPEHHVRFTLKEWMNIVEKAADIEEVHGIGYLSVLPYTPMFSPWYKENNRHGKLFHHLRSKTFEWGPLKPAEIGLTRTLGRLPGLRGWCNSTLLVCKAKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9P8</accession>
    <name>A0A0M7A9P8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DNA-binding protein Fis</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02942</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71828.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672457.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02942"/>
    <dbReference type="EnsemblBacteria" id="CTQ71828">
        <property type="protein sequence ID" value="CTQ71828"/>
        <property type="gene ID" value="LAX5112_02942"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002197">
        <property type="entry name" value="HTH_Fis"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000014">
        <property type="entry name" value="PAS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035965">
        <property type="entry name" value="PAS-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011785">
        <property type="entry name" value="Tscrpt_reg_PpsR-CrtJ"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02954">
        <property type="entry name" value="HTH_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13188">
        <property type="entry name" value="PAS_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01590">
        <property type="entry name" value="HTHFIS"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55785">
        <property type="entry name" value="SSF55785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02040">
        <property type="entry name" value="PpsR-CrtJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00229">
        <property type="entry name" value="sensory_box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50112">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PAS" evidence="1">
        <location>
            <begin position="159"/>
            <end position="230"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50112"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71828.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="478" mass="51810" checksum="C6D5218C3935C2A7" modified="2015-12-09" version="1">MTSPSTHGALQDIGVGTDLLDLLGADALTALIGLGADIVALVDEKGVVNRLHYRNTDLDAYGLSAIVGKPLRDCVTVESVPKIDALLAPARKPPARGYQVNHSASGQPDLPVAYTASRTDDFPFTIVVGHEMRQQMLDQQRLVEAQIAMEADYRELRQAEARYRTVFKMSETALVVLDSEKRTILEANTAAVSLLTGASGNLTGKAIRDLFKKGDRERLADAIGEARHSGEPVQLANLHNSAGSTFDAKLRAYREHGTTNLVITLENSQETDRVDAKRSSDRLNGTRVDLELLPEAALTIDGEGTVLSANTLFLDRVHAPTLNQVVGRNVSNWLGKSTVELSVLFTRVRDEKTLSGFSSVLTDTLGESQDVSLSAHYNKETDTTQLLVILQAASAGKMTLPPPATADQAEGFASLVGKVPLKELIRESLDVVERICIEAALDQTNNNRASAAEILGLSRQSLYIKLRRHGLENYRPGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9R4</accession>
    <name>A0A0M7A9R4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02521</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70473.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70473">
        <property type="protein sequence ID" value="CTQ70473"/>
        <property type="gene ID" value="LAX5112_02521"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="17"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70473.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="50" mass="5441" checksum="6FD16677FA73780F" modified="2015-12-09" version="1">MVSSTIRANQHSQRTNEFGPPGGVLRPIGYVAPLARPTRPTRATRLADEP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AA19</accession>
    <name>A0A0M7AA19_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Glycine betaine transporter OpuD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">opuD_1</name>
        <name evidence="7" type="ORF">LAX5112_02982</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71948.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672486.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02982"/>
    <dbReference type="EnsemblBacteria" id="CTQ71948">
        <property type="protein sequence ID" value="CTQ71948"/>
        <property type="gene ID" value="LAX5112_02982"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071705">
        <property type="term" value="P:nitrogen compound transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000060">
        <property type="entry name" value="BCCT_transptr"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30047">
        <property type="entry name" value="PTHR30047"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02028">
        <property type="entry name" value="BCCT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00842">
        <property type="entry name" value="bcct"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="41"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="78"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="120"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="181"/>
            <end position="198"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="219"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="262"/>
            <end position="283"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="295"/>
            <end position="319"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="349"/>
            <end position="367"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="379"/>
            <end position="402"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="434"/>
            <end position="453"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="480"/>
            <end position="499"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="505"/>
            <end position="528"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ71948.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="535" mass="57987" checksum="4468A0EAEEF16075" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAI9</accession>
    <name>A0A0M7AAI9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 4">Photosynthetic reaction center cytochrome c subunit</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">pufC</name>
        <name evidence="9" type="ORF">LAX5112_02959</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 4">The reaction center of purple bacteria contains a tightly bound cytochrome molecule which re-reduces the photo oxidized primary electron donor.</text>
    </comment>
    <comment type="PTM">
        <text evidence="4 5">Binds 4 heme groups per subunit.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71879.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672470.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02959"/>
    <dbReference type="EnsemblBacteria" id="CTQ71879">
        <property type="protein sequence ID" value="CTQ71879"/>
        <property type="gene ID" value="LAX5112_02959"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030077">
        <property type="term" value="C:plasma membrane light-harvesting complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019684">
        <property type="term" value="P:photosynthesis, light reaction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd09224">
        <property type="entry name" value="CytoC_RC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.468.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023119">
        <property type="entry name" value="Multihaem_cyt_PRC_cyt_su-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036280">
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    <sequence length="380" mass="41478" checksum="7D6DD7D73A327103" modified="2015-12-09" version="1">MQLWIPFAAAAGTLLGIASFVGADWDAPPVETTQMGYRGTGMNVIKDVDKVEALKALNAVPEPLWEADPEGDRASEIYENVQVLGDLSDDQFNLFMAAITEWVAPEEGCGYCHNLENLASDEVYTKVVSRRMIQMNQTINVDWEPHVGDVGVTCYTCHRGQAVPAYYWYDDQEPKPASASGRGRQNVVGQFVGNTSMPQNALAEYLLGDKDIRVHSLTALPDPANPNPAGTKETESTWALMMHMSEGLGVNCVTCHNSRAFNDWDQSPPQRVTAWHGIQMTRALNNDYMVGLTPVFPDNRKGPEGDVFKIGCSTCHQGVQKPLYGVSMLQNYVDALDKKGPTAVPDYSKYVPGETQTMAPDGPTNSSALPAKTTVAATQQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAX2</accession>
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        <submittedName>
            <fullName evidence="2">Putative integral membrane protein</fullName>
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        <name evidence="2" type="ORF">LAX5112_03119</name>
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        <name type="scientific">Roseibium alexandrii</name>
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        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
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                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
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            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
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            <begin position="1"/>
            <end position="32"/>
        </location>
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            <begin position="33"/>
            <end position="101"/>
        </location>
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            <dbReference type="SAM" id="SignalP"/>
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        <source>
            <dbReference type="EMBL" id="CTQ72268.1"/>
        </source>
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        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="101" mass="10170" checksum="09F84368BF99EADB" modified="2015-12-09" version="1">MKNKAMSAAVVAGAVATAIAGLSATTSTPAHAQAKEKCYGVSLKGQNDCKAGPGTTCAGSSTVDYQGNAWTLVPKGTCVSMELPDGRKGSLTELPRDLPEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AB01</accession>
    <name>A0A0M7AB01_9HYPH</name>
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            <fullName evidence="8">Polyribonucleotide nucleotidyltransferase</fullName>
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                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
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        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
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            <strain evidence="11">CECT 5112</strain>
        </source>
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        <text evidence="8">Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction.</text>
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        <reaction evidence="8">
            <text>phosphate + RNA(n+1) = a ribonucleoside 5'-diphosphate + RNA(n)</text>
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            <name>Mg(2+)</name>
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        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 8">Belongs to the polyribonucleotide nucleotidyltransferase family.</text>
    </comment>
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        <property type="project" value="UniProtKB-SubCell"/>
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        <property type="entry name" value="ExoRNase_PH_dom1"/>
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        <property type="entry name" value="ExoRNase_PH_dom2_sf"/>
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        <property type="entry name" value="KH_dom"/>
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        <property type="entry name" value="KH_dom_type_1"/>
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        <property type="entry name" value="NA-bd_OB-fold"/>
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        <property type="entry name" value="PNPase_PH_RNA-bd_bac/org-type"/>
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        <property type="entry name" value="RNase_PH"/>
        <property type="match status" value="2"/>
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        <property type="entry name" value="RNase_PH_C"/>
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        <property type="match status" value="1"/>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00322">
        <property type="entry name" value="KH"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="SSF54211"/>
        <property type="match status" value="2"/>
    </dbReference>
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        <property type="entry name" value="SSF54791"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55666">
        <property type="entry name" value="SSF55666"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03591">
        <property type="entry name" value="polynuc_phos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50126">
        <property type="entry name" value="S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 8" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 8" id="KW-0460">Magnesium</keyword>
    <keyword evidence="5 8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4 8 10" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 8" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="3 8 10" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="S1 motif" evidence="9">
        <location>
            <begin position="624"/>
            <end position="692"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="488"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="494"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007404"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01595"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50126"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ71400.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="710" mass="76075" checksum="94BBE9A90C63C5FD" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AB27</accession>
    <name>A0A0M7AB27_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Nitrogen fixation regulation protein FixK</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">fixK</name>
        <name evidence="4" type="ORF">LAX5112_03040</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72079.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03040"/>
    <dbReference type="EnsemblBacteria" id="CTQ72079">
        <property type="protein sequence ID" value="CTQ72079"/>
        <property type="gene ID" value="LAX5112_03040"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00038">
        <property type="entry name" value="CAP_ED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018490">
        <property type="entry name" value="cNMP-bd-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000595">
        <property type="entry name" value="cNMP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012318">
        <property type="entry name" value="HTH_CRP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018335">
        <property type="entry name" value="Tscrpt_reg_HTH_Crp-type_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00027">
        <property type="entry name" value="cNMP_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13545">
        <property type="entry name" value="HTH_Crp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00034">
        <property type="entry name" value="HTHCRP"/>
    </dbReference>
    <dbReference type="SMART" id="SM00100">
        <property type="entry name" value="cNMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00419">
        <property type="entry name" value="HTH_CRP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51206">
        <property type="entry name" value="SSF51206"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50042">
        <property type="entry name" value="CNMP_BINDING_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00042">
        <property type="entry name" value="HTH_CRP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51063">
        <property type="entry name" value="HTH_CRP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cyclic nucleotide-binding" evidence="2">
        <location>
            <begin position="39"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="domain" description="HTH crp-type" evidence="3">
        <location>
            <begin position="146"/>
            <end position="228"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51063"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ72079.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="237" mass="26507" checksum="5F7EAF080CBC2C2E" modified="2015-12-09" version="1">MAYYEADTFGHAVRTGRPVAEMCASKGTSFEHFGAKQAHYDNHAVIYYEGDPAKRLYELASGTVMLYKLLPDGRRQVVEVLRPGDLFGLSGAEENDCTAETLTNAKVNEIDLRHVEKSADLQRHLTKCLTKQMRVLHEHAVLLGRKSAVERVASFLMHLVPNRGGLGCVGPVDDTEDGYDLQLHMTRQEIADYLGLTIETVSRVVSDMKRRGIIRVDRSDKIHLNKVCGLCHMTGMH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABC4</accession>
    <name>A0A0M7ABC4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Fructose-1,6-bisphosphate aldolase</fullName>
            <shortName evidence="10">FBP aldolase</shortName>
            <ecNumber evidence="10">4.1.2.13</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">fda</name>
        <name evidence="11" type="ORF">LAX5112_03174</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2 10">Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 10">
            <text>beta-D-fructose 1,6-bisphosphate = D-glyceraldehyde 3-phosphate + dihydroxyacetone phosphate</text>
            <dbReference type="Rhea" id="RHEA:14729"/>
            <dbReference type="ChEBI" id="CHEBI:32966"/>
            <dbReference type="ChEBI" id="CHEBI:57642"/>
            <dbReference type="ChEBI" id="CHEBI:59776"/>
            <dbReference type="EC" id="4.1.2.13"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="9">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="9">Binds 2 Zn(2+) ions per subunit. One is catalytic and the other provides a structural contribution.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="10">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="10">One is catalytic and the other provides a structural contribution.</text>
    </comment>
    <comment type="pathway">
        <text evidence="4">Carbohydrate biosynthesis; Calvin cycle.</text>
    </comment>
    <comment type="pathway">
        <text evidence="3 10">Carbohydrate degradation; glycolysis; D-glyceraldehyde 3-phosphate and glycerone phosphate from D-glucose: step 4/4.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5 10">Belongs to the class II fructose-bisphosphate aldolase family.</text>
    </comment>
    <dbReference type="EC" id="4.1.2.13" evidence="10"/>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72418.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672621.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03174"/>
    <dbReference type="EnsemblBacteria" id="CTQ72418">
        <property type="protein sequence ID" value="CTQ72418"/>
        <property type="gene ID" value="LAX5112_03174"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00109">
        <property type="reaction ID" value="UER00183"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00116"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004332">
        <property type="term" value="F:fructose-bisphosphate aldolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006096">
        <property type="term" value="P:glycolytic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019253">
        <property type="term" value="P:reductive pentose-phosphate cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd00947">
        <property type="entry name" value="TBP_aldolase_IIB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000771">
        <property type="entry name" value="FBA_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006412">
        <property type="entry name" value="Fruct_bisP_Calv"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01116">
        <property type="entry name" value="F_bP_aldolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001359">
        <property type="entry name" value="F_bP_aldolase_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00167">
        <property type="entry name" value="cbbA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01521">
        <property type="entry name" value="FruBisAldo_II_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00602">
        <property type="entry name" value="ALDOLASE_CLASS_II_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00806">
        <property type="entry name" value="ALDOLASE_CLASS_II_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0113">Calvin cycle</keyword>
    <keyword evidence="10" id="KW-0324">Glycolysis</keyword>
    <keyword evidence="10 11" id="KW-0456">Lyase</keyword>
    <keyword evidence="9 10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9 10" id="KW-0862">Zinc</keyword>
    <feature type="region of interest" description="Dihydroxyacetone phosphate binding" evidence="8">
        <location>
            <begin position="233"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="region of interest" description="Dihydroxyacetone phosphate binding" evidence="8">
        <location>
            <begin position="275"/>
            <end position="278"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="7">
        <location>
            <position position="83"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="84"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>1</label>
            <note>catalytic</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="105"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="142"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="198"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>1</label>
            <note>catalytic</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="199"/>
        </location>
        <ligand>
            <name>dihydroxyacetone phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:57642"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="232"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>1</label>
            <note>catalytic</note>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000441"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00002181"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004714"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00005215"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00005812"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022567"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR001359-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR001359-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR001359-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU365019"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ72418.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="355" mass="38643" checksum="FB10C7EBD30C90A5" modified="2015-12-09" version="1">MARITLRQLLDHAAENDYGVPAFNINNMEQALAIMAAADQTDSPVIIQASRGARAYAHDVMLKHMMDAVVEIYPHIPVCVHLDHGNAAQTCMTAIQAGFTSVMMDGSLEADGKTPASWDYNVGVTKTVTDMAHLGGISVEGELGVLGSLETGMGDKEDGHGAEGKLTEDQLLTDPDEAVKFVKETKVDALAIAMGTSHGAYKFTRMPDGDILAMHVIEEIHRRLPDTHLVMHGSSSVPQDLQDIINQYGGEMPQTWGVPVEEIQRGIKNGVRKVNIDTDNRMAITGQIRKILQDNPGEFDPRKYLKPAREAMQKLCVARLEAFNTAGQASKIKKIVTLSDMAARYQNGSLDPKIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABV6</accession>
    <name>A0A0M7ABV6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 7">UDP-glucose 6-dehydrogenase</fullName>
            <ecNumber evidence="4 7">1.1.1.22</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">tuaD</name>
        <name evidence="12" type="ORF">LAX5112_03058</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>H2O + 2 NAD(+) + UDP-alpha-D-glucose = 3 H(+) + 2 NADH + UDP-alpha-D-glucuronate</text>
            <dbReference type="Rhea" id="RHEA:23596"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:58052"/>
            <dbReference type="ChEBI" id="CHEBI:58885"/>
            <dbReference type="EC" id="1.1.1.22"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Nucleotide-sugar biosynthesis; UDP-alpha-D-glucuronate biosynthesis; UDP-alpha-D-glucuronate from UDP-alpha-D-glucose: step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 7">Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.22" evidence="4 7"/>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72111.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672532.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03058"/>
    <dbReference type="EnsemblBacteria" id="CTQ72111">
        <property type="protein sequence ID" value="CTQ72111"/>
        <property type="gene ID" value="LAX5112_03058"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00038">
        <property type="reaction ID" value="UER00491"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003979">
        <property type="term" value="F:UDP-glucose 6-dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000271">
        <property type="term" value="P:polysaccharide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006065">
        <property type="term" value="P:UDP-glucuronate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008927">
        <property type="entry name" value="6-PGluconate_DH-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017476">
        <property type="entry name" value="UDP-Glc/GDP-Man"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014027">
        <property type="entry name" value="UDP-Glc/GDP-Man_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036220">
        <property type="entry name" value="UDP-Glc/GDP-Man_DH_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014026">
        <property type="entry name" value="UDP-Glc/GDP-Man_DH_dimer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001732">
        <property type="entry name" value="UDP-Glc/GDP-Man_DH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028357">
        <property type="entry name" value="UDPglc_DH_bac"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00984">
        <property type="entry name" value="UDPG_MGDP_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03720">
        <property type="entry name" value="UDPG_MGDP_dh_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03721">
        <property type="entry name" value="UDPG_MGDP_dh_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF500134">
        <property type="entry name" value="UDPglc_DH_bac"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000124">
        <property type="entry name" value="UDPglc_GDPman_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00984">
        <property type="entry name" value="UDPG_MGDP_dh_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48179">
        <property type="entry name" value="SSF48179"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52413">
        <property type="entry name" value="SSF52413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03026">
        <property type="entry name" value="NDP-sugDHase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7 10" id="KW-0520">NAD</keyword>
    <keyword evidence="5 7 12" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="UDPG_MGDP_dh_C" evidence="11">
        <location>
            <begin position="317"/>
            <end position="418"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="9">
        <location>
            <begin position="152"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="9">
        <location>
            <begin position="252"/>
            <end position="256"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="8">
        <location>
            <position position="263"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="30"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="35"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="86"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="122"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="155"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="207"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="260"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="266"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="324"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="331"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000874"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004701"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006601"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012954"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRNR" id="PIRNR000124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR500134-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR500134-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR500134-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="SMART" id="SM00984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ72111.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="435" mass="47026" checksum="B525C566A6045517" modified="2015-12-09" version="1">MRVAMIGTGYVGLVSGTCFADFGHIVTCIDKDAAKIDALNKGEIPIYEPGLQELVAKNVAEERLFFSTDAEEAVKGADAVFIAVGTPTRRGDGHADLTYVYAAAEEIATLIDGFTVVVTKSTVPVGTGDEVEAIIRKTRPDADFAVVSNPEFLREGAAIEDFKRPDRVVVGTDSSKAVDVMRELYRPLYLNETPILVTKRRTSELIKYAANAFLAVKITFINEIADLCEKVGGNVQEVSRGIGLDNRIGSKFLHAGPGYGGSCFPKDTLALSKIAADAESGLKIVDSVIEVNAARKKKMADKVIDFMGGDVDGKTIALLGLAFKPNTDDMREAPSIDIVQKLQAAGAKIRAFDPASMEEAAKLMQDVMFCDGPYHAIEGADAIVIVTEWDQFRALDLERVKSLVKTPKVADLRNIYTPVYMAEAGFDYTSVGRSY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACM6</accession>
    <name>A0A0M7ACM6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Hypoxic response protein 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">hrp1_2</name>
        <name evidence="4" type="ORF">LAX5112_03250</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72629.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672670.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03250"/>
    <dbReference type="EnsemblBacteria" id="CTQ72629">
        <property type="protein sequence ID" value="CTQ72629"/>
        <property type="gene ID" value="LAX5112_03250"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.580.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000644">
        <property type="entry name" value="CBS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046342">
        <property type="entry name" value="CBS_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00571">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00116">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54631">
        <property type="entry name" value="SSF54631"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51371">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0129">CBS domain</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="150"/>
            <end position="169"/>
        </location>
    </feature>
    <feature type="domain" description="CBS" evidence="3">
        <location>
            <begin position="10"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="domain" description="CBS" evidence="3">
        <location>
            <begin position="77"/>
            <end position="134"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00703"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51371"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ72629.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="170" mass="19383" checksum="0348A949F65494AC" modified="2015-12-09" version="1">MKIKERIEYLSKPKPYTASPDQTVLEASREMSTRNIGSVVVTDDENKVVGLVTERDLMRRIVAEDRKPGETKLSEIMTTSLRLASENDNVVDWLRVMSNERFRRLPVVDSEGRLVSIMTQGDFVSYTWPELLKMFSDNVEKRLGFNNQHLWIIGGVMVYGIAMAVIMAAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACX9</accession>
    <name>A0A0M7ACX9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Histidine kinase</fullName>
            <ecNumber evidence="4">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="primary">luxQ_2</name>
        <name evidence="14" type="ORF">LAX5112_03035</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.</text>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72070.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008196057.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03035"/>
    <dbReference type="EnsemblBacteria" id="CTQ72070">
        <property type="protein sequence ID" value="CTQ72070"/>
        <property type="gene ID" value="LAX5112_03035"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1730.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038377">
        <property type="entry name" value="Na/Glc_symporter_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001734">
        <property type="entry name" value="Na/solute_symporter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035965">
        <property type="entry name" value="PAS-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55785">
        <property type="entry name" value="SSF55785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50283">
        <property type="entry name" value="NA_SOLUT_SYMP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="14" id="KW-0418">Kinase</keyword>
    <keyword evidence="8 11" id="KW-0472">Membrane</keyword>
    <keyword evidence="5 9" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="14" id="KW-0808">Transferase</keyword>
    <keyword evidence="6 11" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 11" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="6"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="44"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="71"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="118"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="158"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="194"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="248"/>
            <end position="266"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="287"/>
            <end position="312"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="332"/>
            <end position="360"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="392"/>
            <end position="409"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="415"/>
            <end position="437"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="449"/>
            <end position="471"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="12">
        <location>
            <begin position="818"/>
            <end position="1030"/>
        </location>
    </feature>
    <feature type="domain" description="Response regulatory" evidence="13">
        <location>
            <begin position="1052"/>
            <end position="1168"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="10">
        <location>
            <begin position="770"/>
            <end position="797"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="9">
        <location>
            <position position="1103"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="CTQ72070.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="1175" mass="128667" checksum="76284F00890781A7" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACY4</accession>
    <name>A0A0M7ACY4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">DoxX</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_03122</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the DoxX family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72276.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672695.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03122"/>
    <dbReference type="EnsemblBacteria" id="CTQ72276">
        <property type="protein sequence ID" value="CTQ72276"/>
        <property type="gene ID" value="LAX5112_03122"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032808">
        <property type="entry name" value="DoxX"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07681">
        <property type="entry name" value="DoxX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="23"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="54"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="85"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="117"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="158"/>
            <end position="181"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ72276.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="192" mass="21273" checksum="232289276ECD2575" modified="2015-12-09" version="1">MVIGFFVRLYTLVFGAIERLTEGWFLGLASRLIFAAVLFQFFWNSALTKIGGSIMNIFTPTAGAYAQMLPAMMEQVSYDTSQIAFFPYGLIVLLGTWGEFILPVLVVVGLFTRAASLGMIVFIIVMTYVDITGHGADAKTIGALFDGDPYAIIADDRLLWIFLLLLPTLKGPGLISLDALLGVQYRKREMYY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AD45</accession>
    <name>A0A0M7AD45_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative GTPase/MT1543</fullName>
            <ecNumber evidence="2">3.6.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03402</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the SIMIBI class G3E GTPase family. ArgK/MeaB subfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.-.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ73008.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03402"/>
    <dbReference type="EnsemblBacteria" id="CTQ73008">
        <property type="protein sequence ID" value="CTQ73008"/>
        <property type="gene ID" value="LAX5112_03402"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005129">
        <property type="entry name" value="GTPase_ArgK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23408">
        <property type="entry name" value="PTHR23408"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00750">
        <property type="entry name" value="lao"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009625"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73008.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="316" mass="33744" checksum="C4A1397CB0AB82DD" modified="2015-12-09" version="1">MISGNRAALARAITLVESKKPEHRKIARELVQEVLPRTGKALRVGITGVPGAGKSTTIDTFGSNLTAAGHKVAVLAVDPSSTRTGGSILGDKTRMAQLAVDRNAFIRPSPSAGTLGGVAAKTRETMLLCEAAGFDVILVETVGIGQSETTVADMVDFFLVLMLPGAGDELQGIKKGVLEIADLIAVNKADGDGATRARAAASDYRAALHILAPKTPTWSPPVITISGLANEGLDHMWEQITVYRERMTASGEWQKRRADQQVSWMWDTLQQRLMESLKTNQKTANRLKTLEADVRDGTTAVSVAVDELSTLMGLND</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADA1</accession>
    <name>A0A0M7ADA1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">HxlR-like helix-turn-helix</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02883</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71614.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672399.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ71614">
        <property type="protein sequence ID" value="CTQ71614"/>
        <property type="gene ID" value="LAX5112_02883"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002577">
        <property type="entry name" value="HTH_HxlR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01638">
        <property type="entry name" value="HxlR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51118">
        <property type="entry name" value="HTH_HXLR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH hxlR-type" evidence="1">
        <location>
            <begin position="10"/>
            <end position="107"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51118"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71614.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="167" mass="18442" checksum="E37C859D0D5A2AED" modified="2015-12-09" version="1">MSRAPIEDDCGIGQALNIVGEWRTLLVLRNLFNGMRTFDAMQSHLGISSSVLAARLKTLSDAGIVEKRPLPEDGRSHEYRLTDKGLDLYPVLVALLHWGEKWTPNGRGPRMTLTERATGLPVRDMAVTAQDGRPLGPREVTPVPGPGASDYTRVLTARWANKREETV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADB0</accession>
    <name>A0A0M7ADB0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 8">Transketolase</fullName>
            <ecNumber evidence="3 8">2.2.1.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">tktA</name>
        <name evidence="10" type="ORF">LAX5112_03179</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>D-glyceraldehyde 3-phosphate + D-sedoheptulose 7-phosphate = aldehydo-D-ribose 5-phosphate + D-xylulose 5-phosphate</text>
            <dbReference type="Rhea" id="RHEA:10508"/>
            <dbReference type="ChEBI" id="CHEBI:57483"/>
            <dbReference type="ChEBI" id="CHEBI:57737"/>
            <dbReference type="ChEBI" id="CHEBI:58273"/>
            <dbReference type="ChEBI" id="CHEBI:59776"/>
            <dbReference type="EC" id="2.2.1.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="8">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <cofactor evidence="8">
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
        </cofactor>
        <cofactor evidence="8">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
        <cofactor evidence="8">
            <name>Co(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:48828"/>
        </cofactor>
        <text evidence="8">Binds 1 Mg(2+) ion per subunit. Can also utilize other divalent metal cations, such as Ca(2+), Mn(2+) and Co(2+).</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="8">
            <name>thiamine diphosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58937"/>
        </cofactor>
        <text evidence="8">Binds 1 thiamine pyrophosphate per subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2 8">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 8">Belongs to the transketolase family.</text>
    </comment>
    <dbReference type="EC" id="2.2.1.1" evidence="3 8"/>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72432.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672624.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03179"/>
    <dbReference type="EnsemblBacteria" id="CTQ72432">
        <property type="protein sequence ID" value="CTQ72432"/>
        <property type="gene ID" value="LAX5112_03179"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004802">
        <property type="term" value="F:transketolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd02012">
        <property type="entry name" value="TPP_TK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.920">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029061">
        <property type="entry name" value="THDP-binding"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009014">
        <property type="entry name" value="Transketo_C/PFOR_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005475">
        <property type="entry name" value="Transketolase-like_Pyr-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005478">
        <property type="entry name" value="Transketolase_bac-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020826">
        <property type="entry name" value="Transketolase_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033248">
        <property type="entry name" value="Transketolase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033247">
        <property type="entry name" value="Transketolase_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005474">
        <property type="entry name" value="Transketolase_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43522">
        <property type="entry name" value="PTHR43522"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02779">
        <property type="entry name" value="Transket_pyr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02780">
        <property type="entry name" value="Transketolase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00456">
        <property type="entry name" value="Transketolase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00861">
        <property type="entry name" value="Transket_pyr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52518">
        <property type="entry name" value="SSF52518"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52922">
        <property type="entry name" value="SSF52922"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00232">
        <property type="entry name" value="tktlase_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00801">
        <property type="entry name" value="TRANSKETOLASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00802">
        <property type="entry name" value="TRANSKETOLASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0106">Calcium</keyword>
    <keyword evidence="6 8" id="KW-0460">Magnesium</keyword>
    <keyword evidence="5 8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 8" id="KW-0786">Thiamine pyrophosphate</keyword>
    <keyword evidence="4 8 10" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="TRANSKETOLASE_1" evidence="9">
        <location>
            <begin position="15"/>
            <end position="35"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007131"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00013152"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU004996"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS00801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ72432.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="662" mass="71254" checksum="C34B4775BEE4224B" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AE03</accession>
    <name>A0A0M7AE03_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Inner membrane protein YnjF</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">ynjF</name>
        <name evidence="4" type="ORF">LAX5112_02992</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the CDP-alcohol phosphatidyltransferase class-I family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71973.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02992"/>
    <dbReference type="EnsemblBacteria" id="CTQ71973">
        <property type="protein sequence ID" value="CTQ71973"/>
        <property type="gene ID" value="LAX5112_02992"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016780">
        <property type="term" value="F:phosphotransferase activity, for other substituted phosphate groups"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008654">
        <property type="term" value="P:phospholipid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.1760">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000462">
        <property type="entry name" value="CDP-OH_P_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043130">
        <property type="entry name" value="CDP-OH_PTrfase_TM_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01066">
        <property type="entry name" value="CDP-OH_P_transf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00379">
        <property type="entry name" value="CDP_ALCOHOL_P_TRANSF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0464">Manganese</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="25"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="72"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="101"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="140"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="168"/>
            <end position="187"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU003750"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ71973.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="195" mass="20480" checksum="F11300C3DECA36F1" modified="2015-12-09" version="1">MIDPPLNAIGVRLANAGISANMVTVTGFCLGCLAAVSIAFGYFLAGFVLIALNRLFDGLDGAVARASQKTDLGGYLDITLDFFFYGAIPLAFAIQAPETNALPAAALLASFYANGSAFLAFAIMAEKRNLSTSHQGAKSLYYIGGLAEGTETIGLFLLMALLPTWFPVLAWVFACVCLVSAGARVLIGLRALKDR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEB8</accession>
    <name>A0A0M7AEB8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Thiol-disulfide oxidoreductase D</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">bdbD_2</name>
        <name evidence="5" type="ORF">LAX5112_03541</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">May be required for disulfide bond formation in some proteins.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the thioredoxin family. DsbA subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73428.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03541"/>
    <dbReference type="EnsemblBacteria" id="CTQ73428">
        <property type="protein sequence ID" value="CTQ73428"/>
        <property type="gene ID" value="LAX5112_03541"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041205">
        <property type="entry name" value="ScsC_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012336">
        <property type="entry name" value="Thioredoxin-like_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013766">
        <property type="entry name" value="Thioredoxin_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18312">
        <property type="entry name" value="ScsC_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13462">
        <property type="entry name" value="Thioredoxin_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51352">
        <property type="entry name" value="THIOREDOXIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809608" evidence="3">
        <location>
            <begin position="33"/>
            <end position="258"/>
        </location>
    </feature>
    <feature type="domain" description="Thioredoxin" evidence="4">
        <location>
            <begin position="53"/>
            <end position="252"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003565"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005791"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ73428.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="258" mass="28092" checksum="C6F91AC278AFED2E" modified="2015-12-09" version="1">MTPFSNLLRLPMARFAAALGLTISVLSTPAIAQDIDRGEIEKIVREYILKNPEIITEALTELERREQAAEEEARREVLTSSADILYNSTRQVVLGNPEGSVTLVEFFDYNCGYCKRAYGDMVRLMDENTDLRVVLKEFPVLGQPSVEAAQVAIAVNSVAPEKYHAFHEALMTRRGQANLASAMEAATGAGISTEDLQAAMTTDEAGQTIEEVYSLANRLGLTGTPSYVIGDEVVMGAVGYDQLNSKLSDLKNCGETTC</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AES4</accession>
    <name>A0A0M7AES4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Inner membrane protein YbbJ</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">ybbJ</name>
        <name evidence="4" type="ORF">LAX5112_03110</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72243.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672589.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03110"/>
    <dbReference type="EnsemblBacteria" id="CTQ72243">
        <property type="protein sequence ID" value="CTQ72243"/>
        <property type="gene ID" value="LAX5112_03110"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002810">
        <property type="entry name" value="NfeD-like_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01957">
        <property type="entry name" value="NfeD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="6"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="33"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="58"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="domain" description="NfeD" evidence="3">
        <location>
            <begin position="62"/>
            <end position="147"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01957"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ72243.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="156" mass="16611" checksum="F50E3FB12057F92C" modified="2015-12-09" version="1">MSLTESIVQALGSWSWVVLGLILLGLEILAPGTVFLWFGLSAIVVGVVALLFDFSWQVHVGLFVVLSIVSLLIGRKLMLKAASETGDPGLNKRGSRYIGREFTLTTPLSEGAGKLSIDDTIWRISGPDMPAGTKVRVDGVDGARLVVSDVNGEKTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFJ0</accession>
    <name>A0A0M7AFJ0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03208</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72513.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72513">
        <property type="protein sequence ID" value="CTQ72513"/>
        <property type="gene ID" value="LAX5112_03208"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ72513.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="35" mass="4059" checksum="AFBF84A7D67887FA" modified="2015-12-09" version="1">MSAYALMRRAHAAHQLCAVYKTKYPYALLFRSGRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFX3</accession>
    <name>A0A0M7AFX3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Tripartite tricarboxylate transporter TctA family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03426</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73110.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672837.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03426"/>
    <dbReference type="EnsemblBacteria" id="CTQ73110">
        <property type="protein sequence ID" value="CTQ73110"/>
        <property type="gene ID" value="LAX5112_03426"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002823">
        <property type="entry name" value="DUF112_TM"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01970">
        <property type="entry name" value="TctA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="26"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="110"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="151"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="211"/>
            <end position="230"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="324"/>
            <end position="344"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="365"/>
            <end position="388"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="394"/>
            <end position="412"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="419"/>
            <end position="437"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="479"/>
            <end position="500"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="521"/>
            <end position="538"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="550"/>
            <end position="568"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="599"/>
            <end position="628"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="634"/>
            <end position="655"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73110.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="675" mass="71117" checksum="D7464E6CB008C153" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGF9</accession>
    <name>A0A0M7AGF9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 5 7">Integration host factor subunit beta</fullName>
            <shortName evidence="5">IHF-beta</shortName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 8" type="primary">ihfB</name>
        <name evidence="5" type="synonym">himD</name>
        <name evidence="8" type="ORF">LAX5112_03563</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5 7">This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2 5 7">Heterodimer of an alpha and a beta chain.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 5 6">Belongs to the bacterial histone-like protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73522.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008191762.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03563"/>
    <dbReference type="EnsemblBacteria" id="CTQ73522">
        <property type="protein sequence ID" value="CTQ73522"/>
        <property type="gene ID" value="LAX5112_03563"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005694">
        <property type="term" value="C:chromosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030527">
        <property type="term" value="F:structural constituent of chromatin"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006417">
        <property type="term" value="P:regulation of translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.520.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00381">
        <property type="entry name" value="IHF_beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000119">
        <property type="entry name" value="Hist_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020816">
        <property type="entry name" value="Histone-like_DNA-bd_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010992">
        <property type="entry name" value="IHF-like_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005685">
        <property type="entry name" value="IHF_beta"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33175">
        <property type="entry name" value="PTHR33175"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00216">
        <property type="entry name" value="Bac_DNA_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01727">
        <property type="entry name" value="DNABINDINGHU"/>
    </dbReference>
    <dbReference type="SMART" id="SM00411">
        <property type="entry name" value="BHL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47729">
        <property type="entry name" value="SSF47729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00988">
        <property type="entry name" value="hip"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00045">
        <property type="entry name" value="HISTONE_LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 7" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="4 5 7" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 7" id="KW-0804">Transcription</keyword>
    <keyword evidence="5 7" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="5 7" id="KW-0810">Translation regulation</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010529"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011870"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00018700"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00381"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003939"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003941"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ73522.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="99" mass="11364" checksum="B34DC9B91C7A821A" modified="2015-12-09" version="1">MIKSELVQHIAEQNPHLYQRDVENIVNAILDEITEALMRGDRVELRGFGAFSVKNRPARIGRNPRTGQKVEVDEKHVPFFKTGKEMRIRLNDGVDHGDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGI9</accession>
    <name>A0A0M7AGI9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Cytidylate kinase</fullName>
            <shortName evidence="8">CK</shortName>
            <ecNumber evidence="8">2.7.4.25</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">Cytidine monophosphate kinase</fullName>
            <shortName evidence="8">CMP kinase</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8 10" type="primary">cmk</name>
        <name evidence="10" type="ORF">LAX5112_03568</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 8">
            <text>ATP + CMP = ADP + CDP</text>
            <dbReference type="Rhea" id="RHEA:11600"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:58069"/>
            <dbReference type="ChEBI" id="CHEBI:60377"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.4.25"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2 8">
            <text>ATP + dCMP = ADP + dCDP</text>
            <dbReference type="Rhea" id="RHEA:25094"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:57566"/>
            <dbReference type="ChEBI" id="CHEBI:58593"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.4.25"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 8">Belongs to the cytidylate kinase family. Type 1 subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.7.4.25" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73536.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672934.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03568"/>
    <dbReference type="EnsemblBacteria" id="CTQ73536">
        <property type="protein sequence ID" value="CTQ73536"/>
        <property type="gene ID" value="LAX5112_03568"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0036430">
        <property type="term" value="F:CMP kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0036431">
        <property type="term" value="F:dCMP kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006220">
        <property type="term" value="P:pyrimidine nucleotide metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd02020">
        <property type="entry name" value="CMPK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00238">
        <property type="entry name" value="Cytidyl_kinase_type1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003136">
        <property type="entry name" value="Cytidylate_kin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011994">
        <property type="entry name" value="Cytidylate_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02224">
        <property type="entry name" value="Cytidylate_kin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00017">
        <property type="entry name" value="cmk"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 8 10" id="KW-0418">Kinase</keyword>
    <keyword evidence="5 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8 10" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Cytidylate_kin" evidence="9">
        <location>
            <begin position="3"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="7"/>
            <end position="15"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001097"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001115"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009427"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00238"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF02224"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ73536.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="206" mass="22050" checksum="18D8722945C33CD3" modified="2015-12-09" version="1">MIIAIDGPAASGKGTLARRLAEHFELRHLDTGLTYRAVAAALLAKGLPLGDESVAIEIAQHLELAQMDKSVLSAHEIGEAASRIAVLGGLREELVNLQRKFAETPPGAVLDGRDIGTVVCPNATVKLFVTASPEARARRRTDEMISKGNEANYASVLDDLKRRDERDSQRTVAPLKQADDAVLLDTTEMDIEAAFQAAVDIVSKAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHI0</accession>
    <name>A0A0M7AHI0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Ribosomal silencing factor RsfS</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2 3" type="primary">rsfS</name>
        <name evidence="3" type="ORF">LAX5112_03618</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Interacts with ribosomal protein L14 (rplN).</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the Iojap/RsfS family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73670.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_050776181.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03618"/>
    <dbReference type="EnsemblBacteria" id="CTQ73670">
        <property type="protein sequence ID" value="CTQ73670"/>
        <property type="gene ID" value="LAX5112_03618"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042256">
        <property type="term" value="P:mature ribosome assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0090071">
        <property type="term" value="P:negative regulation of ribosome biogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017148">
        <property type="term" value="P:negative regulation of translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.460.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01477">
        <property type="entry name" value="Iojap_RsfS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004394">
        <property type="entry name" value="Iojap/RsfS/C7orf30"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043519">
        <property type="entry name" value="NT_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21043">
        <property type="entry name" value="PTHR21043"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81301">
        <property type="entry name" value="SSF81301"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00090">
        <property type="entry name" value="rsfS_iojap_ybeB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0678">Repressor</keyword>
    <keyword evidence="2" id="KW-0810">Translation regulation</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ73670.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="127" mass="13665" checksum="C908F45E7DBEF641" modified="2015-12-09" version="1">MSTPLKASVSADLTAGLLDTVLASLEDSKAEDLVTLDIAGKSSLADHMVIVSGRSHRHVGAIADHLQRDLKTAGHGNATVEGQTTCDWVLIDAGDVIVHIFRPEVRGFYNLEKMWAPEEDDAPQYIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIY9</accession>
    <name>A0A0M7AIY9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03919</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74607.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74607">
        <property type="protein sequence ID" value="CTQ74607"/>
        <property type="gene ID" value="LAX5112_03919"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809480" evidence="1">
        <location>
            <begin position="27"/>
            <end position="194"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74607.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="194" mass="20914" checksum="CFBC5A62E91721D1" modified="2015-12-09" version="1">MSARPVISTIAAAALSVFAFSGAASAMSEPTFEEAFAAAETISYKAQVVTTNPARNEIIVKAKDRNEFAVPVQPGFDIASVRENQFLNVTYLAGVVIDIEKSKNTKPEIDASKTVVLADEDRLPAGLTARQMTVTVKILTADTETGKVRFTGPDGEDRTYTVQNPDILSDLRIKGGDLFDITFFDAIGFEITNT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJ04</accession>
    <name>A0A0M7AJ04_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">DnaA regulatory inactivator Hda</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03903</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74561.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673207.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03903"/>
    <dbReference type="EnsemblBacteria" id="CTQ74561">
        <property type="protein sequence ID" value="CTQ74561"/>
        <property type="gene ID" value="LAX5112_03903"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ74561.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="226" mass="24575" checksum="6FF51A743C4FF132" modified="2015-12-09" version="1">MAETPRQLPLDLPHDAALGREDYLVGKSNQAAFELLERWPDWPSPVIILAGPVGSGKTHLVEAFRDETGAEVIQARDLTEAGVSALVAAPACVVEDAHRGVNNTALFHLLNAARQAGKTVLITSRTWPASWKISLPDLLSRLRAATPVEVLEPDDDLLRRVLVKLFADRQIGVDIGVVDYLVVRMERSLEVALRAVDSIDREALAGRVKITKPLAGRVLETVTGTD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJW4</accession>
    <name>A0A0M7AJW4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">D-malate degradation protein R</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">dmlR_11</name>
        <name evidence="3" type="ORF">LAX5112_03677</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ73874.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673024.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ73874">
        <property type="protein sequence ID" value="CTQ73874"/>
        <property type="gene ID" value="LAX5112_03677"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ73874.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="302" mass="32850" checksum="6FB28C339207E17E" modified="2015-12-09" version="1">MDTECLRLFVLAAEKSNISAAGKVLGLAPSIASARLAKLERSLGSDLLHRSTRKVSLSQEGAEFLPYAREILAQEDAARAALGHGKPEATGTLRFTAPSTFAQLYIVPLLPEFMERHPGIRLDLRLSDVKYDLIDGSFDLALRNSAMEDTSLKGRKLADDTRILCASPGYLAAHGVPTAPDELQQHQLIGFAARTAKPLMSPTGPEGVFDTRGHNARLTMDNGLSQKLATLAGAGISANSLWSVHRELKTGTLIRVLPDHIVDDPSMLWLIYPKSNVLTAKVRVFIDFLLEKIGKAPPWLKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJW5</accession>
    <name>A0A0M7AJW5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">3-hydroxyanthranilate 3,4-dioxygenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_04241</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75455.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673477.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000021.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04241"/>
    <dbReference type="EnsemblBacteria" id="CTQ75455">
        <property type="protein sequence ID" value="CTQ75455"/>
        <property type="gene ID" value="LAX5112_04241"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051213">
        <property type="term" value="F:dioxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013096">
        <property type="entry name" value="Cupin_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07883">
        <property type="entry name" value="Cupin_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0223">Dioxygenase</keyword>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cupin_2" evidence="2">
        <location>
            <begin position="31"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="99"/>
            <end position="118"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ75455.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="118" mass="13323" checksum="D19439D535E794E6" modified="2015-12-09" version="1">MKPINLSDKLSMFATHWDPHVVADYNTNDVMVVKFKGEFPFHQHEDTDDFFLVLEGEMIMDIEGEDPHVVKAGELFIVPTGVVHRPRAEEETKVLLIEPKGVPNTGDSDVKPATKPRI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AK06</accession>
    <name>A0A0M7AK06_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">MarR family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04150</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75219.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673402.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04150"/>
    <dbReference type="EnsemblBacteria" id="CTQ75219">
        <property type="protein sequence ID" value="CTQ75219"/>
        <property type="gene ID" value="LAX5112_04150"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000835">
        <property type="entry name" value="HTH_MarR-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023187">
        <property type="entry name" value="Tscrpt_reg_MarR-type_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12802">
        <property type="entry name" value="MarR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00347">
        <property type="entry name" value="HTH_MARR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01117">
        <property type="entry name" value="HTH_MARR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH marR-type" evidence="1">
        <location>
            <begin position="24"/>
            <end position="125"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00347"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75219.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="186" mass="20305" checksum="909D83B6631ACF6F" modified="2015-12-09" version="1">MTNDREHPRFISDLIDRLGRLNAAEEWNGPLNPSQFAALSYLARANRFSRAPSNVADYLATTRGTASQTLKALARKELIAESRLEEDKRSIRYDVTADGRALLAAQSAMSSAISALEAPNAAALKDGLTALVMKLLEQRGAKSFGLCKECRHHQSTESGGYCQLLDVPLKPPEAEQICHEHTPTTG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKF3</accession>
    <name>A0A0M7AKF3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Regulatory protein of adaptative response</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ada_3</name>
        <name evidence="7" type="ORF">LAX5112_03816</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>a 4-O-methyl-thymidine in DNA + L-cysteinyl-[protein] = a thymidine in DNA + S-methyl-L-cysteinyl-[protein]</text>
            <dbReference type="Rhea" id="RHEA:53428"/>
            <dbReference type="Rhea" id="RHEA-COMP:10131"/>
            <dbReference type="Rhea" id="RHEA-COMP:10132"/>
            <dbReference type="Rhea" id="RHEA-COMP:13555"/>
            <dbReference type="Rhea" id="RHEA-COMP:13556"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:82612"/>
            <dbReference type="ChEBI" id="CHEBI:137386"/>
            <dbReference type="ChEBI" id="CHEBI:137387"/>
            <dbReference type="EC" id="2.1.1.63"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>a 6-O-methyl-2'-deoxyguanosine in DNA + L-cysteinyl-[protein] = a 2'-deoxyguanosine in DNA + S-methyl-L-cysteinyl-[protein]</text>
            <dbReference type="Rhea" id="RHEA:24000"/>
            <dbReference type="Rhea" id="RHEA-COMP:10131"/>
            <dbReference type="Rhea" id="RHEA-COMP:10132"/>
            <dbReference type="Rhea" id="RHEA-COMP:11367"/>
            <dbReference type="Rhea" id="RHEA-COMP:11368"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:82612"/>
            <dbReference type="ChEBI" id="CHEBI:85445"/>
            <dbReference type="ChEBI" id="CHEBI:85448"/>
            <dbReference type="EC" id="2.1.1.63"/>
        </reaction>
    </comment>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74263.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673123.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03816"/>
    <dbReference type="EnsemblBacteria" id="CTQ74263">
        <property type="protein sequence ID" value="CTQ74263"/>
        <property type="gene ID" value="LAX5112_03816"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003908">
        <property type="term" value="F:methylated-DNA-[protein]-cysteine S-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06445">
        <property type="entry name" value="ATase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001497">
        <property type="entry name" value="MethylDNA_cys_MeTrfase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014048">
        <property type="entry name" value="MethylDNA_cys_MeTrfase_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036217">
        <property type="entry name" value="MethylDNA_cys_MeTrfase_DNAb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036631">
        <property type="entry name" value="MGMT_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01035">
        <property type="entry name" value="DNA_binding_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46767">
        <property type="entry name" value="SSF46767"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53155">
        <property type="entry name" value="SSF53155"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00589">
        <property type="entry name" value="ogt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00374">
        <property type="entry name" value="MGMT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0227">DNA damage</keyword>
    <keyword evidence="5" id="KW-0234">DNA repair</keyword>
    <keyword evidence="3" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="6">
        <location>
            <begin position="31"/>
            <end position="128"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001286"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001596"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ74263.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="305" mass="33405" checksum="7A3B918C08D5E8DE" modified="2015-12-09" version="1">MTKALDLSQLASDPKPISVGEEAAENYMVVRQTLKRITEDWRDQPTLELLAKEAGLQPIQLQRVFARWAGLTPKQFLQAITLDHAKALLRDTASVLDASYEVGLSGSSRLHDLFVTHEAMTPGDYRNRGAGLKIAYGFHPSPFGQVLIMATDKGLAGLGFADPGEEDSALSDMCERWPAASFRNDPEETAKYAGRVFDPKKWQEDQPLNIVMIGTDFEIRVWQTLLKIPMGKATTYSDIAACLGKPKASRAVGTAVGRNPISFVVPCHRVLAKGGKLGGYHWGLTRKRAILGWETGLSGPVLECV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKM1</accession>
    <name>A0A0M7AKM1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Chromosome segregation protein SMC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">LAX5112_03964</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74760.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03964"/>
    <dbReference type="EnsemblBacteria" id="CTQ74760">
        <property type="protein sequence ID" value="CTQ74760"/>
        <property type="gene ID" value="LAX5112_03964"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019133">
        <property type="entry name" value="Mt-IM_prot_Mitofilin"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09731">
        <property type="entry name" value="Mitofilin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0732">Signal</keyword>
    <keyword evidence="1 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="8">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809423" evidence="8">
        <location>
            <begin position="20"/>
            <end position="508"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="54"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="5">
        <location>
            <begin position="90"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="5">
        <location>
            <begin position="235"/>
            <end position="269"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ74760.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="508" mass="51266" checksum="9A509E19CEBA7128" modified="2015-12-09" version="1">MTPGADAGKSSSSSTSASAATSKPSSNSSSSAQKPASGSASFSNPPAAQESSGVGAFGVLIAAVIGGVLVLGGGFGLYQAGIVKLTPEQDQEMSRALTAAERKISDLESQLSALGTTVSGQDVSGALSDLESKVAAVEQSLAEAAQSGGADVSGAVDALKQDFDALKADLASGSATSSDGTSVNLAPLETRLSSLEDTVKSAAPVDLAPIESRLNELEGGTSAATSETEKLSGSVTDLEGQVKGFETQLTELQTRLQNTEATAKAAQTAVSTSDVSLKTLADSQARATETLSSLSADIQSVGAANNAALEDLRAELDSLSKRLVQVESTMGDATARETAARALSVSALKSAVDSGRPYETELAAVKAGLPADMDLSALEAHAKTGVEPVSVLIAQFPNVARSIYQTFAEPDESGDVLQSFLASARSLVAVRGPGNADGTGPDAVLRRMENAVSKGDLSAALAASKDLPQAGQDAAADWTNRAEARVEVDALTDKASQEVLSALAKNDS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKR1</accession>
    <name>A0A0M7AKR1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 9">Flagellar biosynthetic protein FliQ</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">fliQ_2</name>
        <name evidence="9" type="synonym">fliQ</name>
        <name evidence="10" type="ORF">LAX5112_04078</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Role in flagellar biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cell membrane</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="9">Bacterial flagellum basal body</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the FliQ/MopD/SpaQ family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ74996.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008188784.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04078"/>
    <dbReference type="EnsemblBacteria" id="CTQ74996">
        <property type="protein sequence ID" value="CTQ74996"/>
        <property type="gene ID" value="LAX5112_04078"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009425">
        <property type="term" value="C:bacterial-type flagellum basal body"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044780">
        <property type="term" value="P:bacterial-type flagellum assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009306">
        <property type="term" value="P:protein secretion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002191">
        <property type="entry name" value="Bac_export_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006305">
        <property type="entry name" value="FliQ"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34040">
        <property type="entry name" value="PTHR34040"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01313">
        <property type="entry name" value="Bac_export_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004669">
        <property type="entry name" value="FliQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00952">
        <property type="entry name" value="TYPE3IMQPROT"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01402">
        <property type="entry name" value="fliQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 9" id="KW-0975">Bacterial flagellum</keyword>
    <keyword evidence="4 9" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="10" id="KW-0966">Cell projection</keyword>
    <keyword evidence="10" id="KW-0969">Cilium</keyword>
    <keyword evidence="10" id="KW-0282">Flagellum</keyword>
    <keyword evidence="7 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 9" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="12"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="50"/>
            <end position="69"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006156"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00021718"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023143"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU364090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ74996.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="88" mass="9411" checksum="9E2A2AF845FAAB9B" modified="2015-12-09" version="1">MNEVDALDLVRTAIWTILIGSAPAIIPAMIVGIGIALLQALTQVQEITLTFIPKIVAILVMIVIAGPFIGGQMYALTTVIYSRIENGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKU0</accession>
    <name>A0A0M7AKU0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Cytochrome b/c1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">fbcH_1</name>
        <name evidence="10" type="ORF">LAX5112_04170</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75277.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008193504.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04170"/>
    <dbReference type="EnsemblBacteria" id="CTQ75277">
        <property type="protein sequence ID" value="CTQ75277"/>
        <property type="gene ID" value="LAX5112_04170"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.760.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009056">
        <property type="entry name" value="Cyt_c-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036909">
        <property type="entry name" value="Cyt_c-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002326">
        <property type="entry name" value="Cyt_c1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10266">
        <property type="entry name" value="PTHR10266"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02167">
        <property type="entry name" value="Cytochrom_C1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00603">
        <property type="entry name" value="CYTOCHROMEC1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46626">
        <property type="entry name" value="SSF46626"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51007">
        <property type="entry name" value="CYTC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 6" id="KW-0349">Heme</keyword>
    <keyword evidence="5 6" id="KW-0408">Iron</keyword>
    <keyword evidence="7" id="KW-0472">Membrane</keyword>
    <keyword evidence="3 6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0732">Signal</keyword>
    <keyword evidence="2 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="8">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809509" evidence="8">
        <location>
            <begin position="26"/>
            <end position="279"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="251"/>
            <end position="269"/>
        </location>
    </feature>
    <feature type="domain" description="Cytochrome c" evidence="9">
        <location>
            <begin position="49"/>
            <end position="177"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00433"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ75277.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="279" mass="31102" checksum="7611B22B6907AB0F" modified="2015-12-09" version="1">MKTMITMVRSLAAVAALAIASPAFAAGAKVEIDYQDWSFAGPFGYYDRAQLQRGFKVYVENCSACHALSRVAFRNLAEDGGPSFTEDQAKAIAADYTVVDGPDDFGDMYDRPAILADRFPSPFPNENAARAANNGAYPPDFSLLAKARAPQRGFPGFVFDIFTQYQENGPDYIYSLLTGYVDPPEGVEVPVGQYYNHSFLAGEFISMAPPLFEEAVEYTDGTPMTVENYARDVSAFMMWAAEPHLEDRKKIGFRVMLFLIVFAGMLYFTKKKIWRDVEH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AL25</accession>
    <name>A0A0M7AL25_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 6">Uronate isomerase</fullName>
            <ecNumber evidence="4 6">5.3.1.12</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Glucuronate isomerase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">Uronic isomerase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6 7" type="primary">uxaC</name>
        <name evidence="7" type="ORF">LAX5112_04290</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 6">
            <text>D-glucuronate = D-fructuronate</text>
            <dbReference type="Rhea" id="RHEA:13049"/>
            <dbReference type="ChEBI" id="CHEBI:58720"/>
            <dbReference type="ChEBI" id="CHEBI:59863"/>
            <dbReference type="EC" id="5.3.1.12"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>aldehydo-D-galacturonate = keto-D-tagaturonate</text>
            <dbReference type="Rhea" id="RHEA:27702"/>
            <dbReference type="ChEBI" id="CHEBI:12952"/>
            <dbReference type="ChEBI" id="CHEBI:17886"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 6">Carbohydrate metabolism; pentose and glucuronate interconversion.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 6">Belongs to the metallo-dependent hydrolases superfamily. Uronate isomerase family.</text>
    </comment>
    <dbReference type="EC" id="5.3.1.12" evidence="4 6"/>
    <dbReference type="EMBL" id="CXWD01000022">
        <property type="protein sequence ID" value="CTQ75579.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673523.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000022.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04290"/>
    <dbReference type="EnsemblBacteria" id="CTQ75579">
        <property type="protein sequence ID" value="CTQ75579"/>
        <property type="gene ID" value="LAX5112_04290"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00246"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008880">
        <property type="term" value="F:glucuronate isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006064">
        <property type="term" value="P:glucuronate catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00675">
        <property type="entry name" value="UxaC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032466">
        <property type="entry name" value="Metal_Hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003766">
        <property type="entry name" value="Uronate_isomerase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02614">
        <property type="entry name" value="UxaC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51556">
        <property type="entry name" value="SSF51556"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0413">Isomerase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001165"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008397"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012546"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00020555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00675"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ75579.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="470" mass="52295" checksum="1BB43DDF3E2FFF05" modified="2015-12-09" version="1">MTAPFLGPDFLLDTAASRRLYHDVAKHLPIVDFHNHLDPAAIAKNKSWRSIGEIWLEGDHYKWRAMRWNGVPEELVTGAADYRDKFDAFAQTIPHCLGNPLYHWTHLELQRYFEWDGIFGPDTADEVWELANAALTQPSHSAQGLLTAMNVEYVGTTDDPTDDLASHAALKSDPDFAVPVAPSFRPDKALVPTAPGFAAYCRKLGEASGIAVDSFDTLIAALLKRLDFFVSLGCKAADHGLNDLPAFEKRPPRELDIILRSGQNGWPMSAQDAADFKAAVLIELGEAYAERGIVMQYHIGVLRNQNSRLFRALGPDVGGDCMSDCGIGGSLNSVLDLINSRKGLPRTILYALNPIHNEMLVTIAGNFQDGSEPGKVQAGPGWWYNDQLDGMERQLTQVAQMGLLSRFVGMLTDSRSFLSFPRHEYYRRLVSRMVGRWVEDGSIPAHKELSDGLIRRISYENARDWFLPEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMT6</accession>
    <name>A0A0M7AMT6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Peptidyl-prolyl cis-trans isomerase</fullName>
            <shortName evidence="3">PPIase</shortName>
            <ecNumber evidence="3">5.2.1.8</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ppiB_1</name>
        <name evidence="5" type="ORF">LAX5112_04033</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 3">PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>[protein]-peptidylproline (omega=180) = [protein]-peptidylproline (omega=0)</text>
            <dbReference type="Rhea" id="RHEA:16237"/>
            <dbReference type="Rhea" id="RHEA-COMP:10747"/>
            <dbReference type="Rhea" id="RHEA-COMP:10748"/>
            <dbReference type="ChEBI" id="CHEBI:83833"/>
            <dbReference type="ChEBI" id="CHEBI:83834"/>
            <dbReference type="EC" id="5.2.1.8"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2 3">Belongs to the cyclophilin-type PPIase family.</text>
    </comment>
    <dbReference type="EC" id="5.2.1.8" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ74914.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04033"/>
    <dbReference type="EnsemblBacteria" id="CTQ74914">
        <property type="protein sequence ID" value="CTQ74914"/>
        <property type="gene ID" value="LAX5112_04033"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003755">
        <property type="term" value="F:peptidyl-prolyl cis-trans isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000413">
        <property type="term" value="P:protein peptidyl-prolyl isomerization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.100.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029000">
        <property type="entry name" value="Cyclophilin-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024936">
        <property type="entry name" value="Cyclophilin-type_PPIase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002130">
        <property type="entry name" value="Cyclophilin-type_PPIase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044666">
        <property type="entry name" value="Cyclophilin_A-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45625">
        <property type="entry name" value="PTHR45625"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00160">
        <property type="entry name" value="Pro_isomerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001467">
        <property type="entry name" value="Peptidylpro_ismrse"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00153">
        <property type="entry name" value="CSAPPISMRASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50891">
        <property type="entry name" value="SSF50891"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50072">
        <property type="entry name" value="CSA_PPIASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0413">Isomerase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0697">Rotamase</keyword>
    <feature type="domain" description="PPIase cyclophilin-type" evidence="4">
        <location>
            <begin position="7"/>
            <end position="156"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002388"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007365"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU363019"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ74914.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="156" mass="17109" checksum="8C7264185460C67E" modified="2015-12-09" version="1">MADIKDAENTLIMDTTQGEVVIEMRPDLAPNHVARIKELVREGFYDGIVFHRVIEGFMAQTGCPNGTGAGGSGTKLKAEFNAEPHVRGVCSMARAQDPNSGDSQFFICFDDATFLDRQYTAWGKVIEGMENVDKIKRGEPVQNPDKINSMKVAVDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANU2</accession>
    <name>A0A0M7ANU2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Replication initiation protein RepC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_04240</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75453.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04240"/>
    <dbReference type="EnsemblBacteria" id="CTQ75453">
        <property type="protein sequence ID" value="CTQ75453"/>
        <property type="gene ID" value="LAX5112_04240"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005090">
        <property type="entry name" value="Rep_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021760">
        <property type="entry name" value="RP-C_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03428">
        <property type="entry name" value="RP-C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11800">
        <property type="entry name" value="RP-C_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RP-C_C" evidence="2">
        <location>
            <begin position="358"/>
            <end position="456"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="308"/>
            <end position="358"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="311"/>
            <end position="325"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF11800"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ75453.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="457" mass="49788" checksum="4E4504320DEF579F" modified="2015-12-09" version="1">MTDRIATTPFGGGPFSIALFKAHEKLEADRAALKTSGNRTGKTDKWQFLRALTEARDVYALSDRTIAVLEALLSFHPEKELDGSEDIIVFPSNAELSLRTRGMSAPTLRRHIATLVKTGLLLRKDSANGKRFARKGPGGEVRDAFGFNLAPAALMAPEVFEHAEAARAHAAEVRKVRAEITLHLRDISKMIAAAYEDGQGTRSPGLWLGFTEELRALSGRVARNGALCDHKARCEALVTLRARVESAFLAGMDEADLRDRDCEEASAQTGDISNLDLEMSGNDARTERHIQNSNKDDSFEYCLDNNEAEGRASGGEQRAHFNHDGTEAGHGNPLADPQGTEAHENRGSAKADPEQVSLGDLKRACPSFADYALEGLGNWSDARKAAELIRPMLGISKDAWVRAQQHMGPAGAIVTMAYLVERAEEIKSAGGYLRALSEKAEAGKFRLRPMLDSLLNR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANX9</accession>
    <name>A0A0M7ANX9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04721</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000029">
        <property type="protein sequence ID" value="CTQ76838.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673914.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000029.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04721"/>
    <dbReference type="EnsemblBacteria" id="CTQ76838">
        <property type="protein sequence ID" value="CTQ76838"/>
        <property type="gene ID" value="LAX5112_04721"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009367">
        <property type="entry name" value="Elm1-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33986">
        <property type="entry name" value="PTHR33986"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06258">
        <property type="entry name" value="Mito_fiss_Elm1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ76838.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="333" mass="36126" checksum="143B26DFAE2027A6" modified="2015-12-09" version="1">MLNATASPRSLWILTDGKAGDVAQCVGVADTLNLPHEMRTVSPKPPYSWWMPFGPFPPADREDQPGSPIAPPFPDIAVASGRRAAAYLRRLKKASKGKTFTVFLKDPRSGTDAADLIWVPEHDPLRGENVLVTPTSPHKFSAARLAELKAELVQQIDDLPQPRVAVLVGGNSRHHTFTENDQTRFLDGLRETAEQDGTHFLITASRRTPELLVDGIKILVRNGGHFFWDGTGNNPYGHFLAKSDAIIATADSTNMIGEAAATGKPIHVFHPSGGHAKITRFLGTLEGMGCVHPFPGPLKTTTYDPIDATPVIAERILADYRALHQTGQISQGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AP42</accession>
    <name>A0A0M7AP42_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Choline-sulfatase</fullName>
            <ecNumber evidence="6">3.1.6.6</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">betC</name>
        <name evidence="6" type="ORF">LAX5112_04742</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="PTM">
        <text evidence="3">The conversion to 3-oxoalanine (also known as C-formylglycine, FGly), of a serine or cysteine residue in prokaryotes and of a cysteine residue in eukaryotes, is critical for catalytic activity.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the sulfatase family.</text>
    </comment>
    <dbReference type="EC" id="3.1.6.6" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000029">
        <property type="protein sequence ID" value="CTQ76898.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673911.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000029.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04742"/>
    <dbReference type="EnsemblBacteria" id="CTQ76898">
        <property type="protein sequence ID" value="CTQ76898"/>
        <property type="gene ID" value="LAX5112_04742"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047753">
        <property type="term" value="F:choline-sulfatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd16032">
        <property type="entry name" value="choline-sulfatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017850">
        <property type="entry name" value="Alkaline_phosphatase_core_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017785">
        <property type="entry name" value="Choline-sulfatase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025863">
        <property type="entry name" value="Choline_sulf_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024607">
        <property type="entry name" value="Sulfatase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000917">
        <property type="entry name" value="Sulfatase_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12411">
        <property type="entry name" value="Choline_sulf_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00884">
        <property type="entry name" value="Sulfatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53649">
        <property type="entry name" value="SSF53649"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03417">
        <property type="entry name" value="chol_sulfatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00149">
        <property type="entry name" value="SULFATASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Sulfatase" evidence="4">
        <location>
            <begin position="5"/>
            <end position="348"/>
        </location>
    </feature>
    <feature type="domain" description="Choline_sulf_C" evidence="5">
        <location>
            <begin position="450"/>
            <end position="501"/>
        </location>
    </feature>
    <feature type="modified residue" description="3-oxoalanine (Cys)" evidence="3">
        <location>
            <position position="53"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008779"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR600917-51"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF12411"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ76898.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="505" mass="57355" checksum="0F4C5D2CEFE8BFC6" modified="2015-12-09" version="1">MAGQKNILILMVDQLNGTLFPDGPADFLHAPHLKALAERSVRFQNSYTASPLCAPGRASFMSGQLPRRTGVYDNAAEFASDIPTYAHHLRRAGYTTCLSGKMHFVGPDQMHGFEERLTTDIYPADFGWTPDYRKPGERIDWWYHNMGSVTGAGVAEISNQMEYDDDVAFQAIRKIYDYGRGKYDRPFCLTVSFTHPHDPYVARKKYWDLYEDCDHLLPELPAKAHEDHDPHSKRIFDANDWRSFDITEDDIRRSRRAYFANISYLDDKIGEILAAIDAMALADDTTILFVSDHGDMLGERGLWFKMTFFEGSSRVPLMVCDKDLSPHLETAPVSTLDVLPTVCDLAGIDMSEIMPWTDGTSLVPLAKGTARAEPVLMEYAAEASYAPLVGIREGNWKYIHCDLDPPQLFNLADDPNEQTNLADDPTHAEVAASFATKVGEKWDMSAFDAEVRQSQARRWIVYEALRNGAYFPWDYQPLQKASERYMRNHMDLNEVEDGQRYPRGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQ92</accession>
    <name>A0A0M7AQ92_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04671</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000028">
        <property type="protein sequence ID" value="CTQ76681.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76681">
        <property type="protein sequence ID" value="CTQ76681"/>
        <property type="gene ID" value="LAX5112_04671"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="38"/>
            <end position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76681.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="66" mass="6898" checksum="28B6B8765F755406" modified="2015-12-09" version="1">MAMALTKHPLSIWMWVPAAVNVARGLVIIAGVLEGRAILLGIAIGVNFIVTGGAMIVVANMIEVED</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQL3</accession>
    <name>A0A0M7AQL3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Transport of quorum-sensing signal protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">tqsA_2</name>
        <name evidence="8" type="ORF">LAX5112_04687</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the autoinducer-2 exporter (AI-2E) (TC 2.A.86) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000028">
        <property type="protein sequence ID" value="CTQ76722.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673869.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000028.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76722">
        <property type="protein sequence ID" value="CTQ76722"/>
        <property type="gene ID" value="LAX5112_04687"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002549">
        <property type="entry name" value="AI-2E-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21716">
        <property type="entry name" value="PTHR21716"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01594">
        <property type="entry name" value="AI-2E_transport"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="21"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="66"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="143"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="202"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="233"/>
            <end position="259"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="265"/>
            <end position="285"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="297"/>
            <end position="315"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="350"/>
            <end position="372"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009773"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ76722.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="391" mass="42077" checksum="004F219A3A193D0A" modified="2015-12-09" version="1">MTGQKQQQNSVDIGGQFRTASLIILGICGLLGLLVIGRGFLVPIVVACIFTSLISAGISKLEERGLPGWASMLISVSGFFLLIYGLAQIFAVQSDTVTATLPKYAERFDQLLADLAALLGQNQVAQIRSAIAQMDFSAHIASLAESVSGLFGSLGLVLMYTAFLLSERGMLLSKLAHLFPDPDKAKEVQVVLRTVGFGIRRYMWIKTVVSLLTGGLCYLVLRYVKADFAEIQALLIFLLNFIPTIGSIVGVIIPALVTLAQFDTLTPFLIVVAVCGSVQFVVGNIIEPKFMGSTLNLSPFIVIVSLTFWGTVWGIEGAFLSVPIAASIIILCRDIPALRFVAVLMSADGDLSKGRKQPLPADQAVPSETKAEDVRIRELQEELKAIQNEGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AR05</accession>
    <name>A0A0M7AR05_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04751</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000030">
        <property type="protein sequence ID" value="CTQ76941.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673917.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000030.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76941">
        <property type="protein sequence ID" value="CTQ76941"/>
        <property type="gene ID" value="LAX5112_04751"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809867" evidence="1">
        <location>
            <begin position="24"/>
            <end position="162"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76941.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="162" mass="17465" checksum="92EBD48B7CBEA122" modified="2015-12-09" version="1">MKRWVIAACFCAAAAVAAAPAMAGKGDLKRSVPRSAPLLKGKTLDLRFADFAQGIWVRDLSNCPAPRIDRNDPGAAIAIYRGLLETPSRICQVYGAEKDKQFTQRAAINCLLNDGGEAIELVTVQPRGTNGLIVQEGERAPVHFRFCEAIQPVLQSAQSSDN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AR93</accession>
    <name>A0A0M7AR93_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Polyphosphate:AMP phosphotransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_04759</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>[phosphate](n) + ATP = [phosphate](n+1) + ADP</text>
            <dbReference type="Rhea" id="RHEA:19573"/>
            <dbReference type="Rhea" id="RHEA-COMP:9859"/>
            <dbReference type="Rhea" id="RHEA-COMP:14280"/>
            <dbReference type="ChEBI" id="CHEBI:16838"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
        </reaction>
        <physiologicalReaction direction="right-to-left" evidence="1">
            <dbReference type="Rhea" id="RHEA:19575"/>
        </physiologicalReaction>
    </comment>
    <dbReference type="EMBL" id="CXWD01000030">
        <property type="protein sequence ID" value="CTQ76962.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673924.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000030.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04759"/>
    <dbReference type="EnsemblBacteria" id="CTQ76962">
        <property type="protein sequence ID" value="CTQ76962"/>
        <property type="gene ID" value="LAX5112_04759"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043751">
        <property type="term" value="F:polyphosphate:AMP phosphotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006797">
        <property type="term" value="P:polyphosphate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022489">
        <property type="entry name" value="PolyP_AMP_Tfrase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022488">
        <property type="entry name" value="PPK2-related"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03976">
        <property type="entry name" value="PPK2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03708">
        <property type="entry name" value="poly_P_AMP_trns"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PPK2" evidence="2">
        <location>
            <begin position="17"/>
            <end position="231"/>
        </location>
    </feature>
    <feature type="domain" description="PPK2" evidence="2">
        <location>
            <begin position="265"/>
            <end position="485"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00024500"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF03976"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ76962.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="488" mass="56839" checksum="823F23DB12CD22AF" modified="2015-12-09" version="1">MFESARMPQKMTKKSFKKLEPELREALLAAQLPVIEKQQFSTLILVDGLDGAGKGEAVARLYGWMDARHLVCNAYGEPMDEARLRPPLWRYWRDLPAKGETAIVFGSWYQSLLRDRIYKKIDEDAFEKGLVRIRRFEEMLANEDVLILKFWFVLPKDVQKERLRKIEKKSAGRHVLADWAALKHHKKASETGEKIILETSMGFAPWFVIPSQDPEYRDVALGQTVARSMQLKLEDGEPSSVAAPPVVGGLKRETAVDAIDLTETLEKTEYEKLRKKYQDQLSELSDRKSMTKTGVVLVFQGNDAAGKGGAIRRLIRPLDPRIYKVHSISAPTDEEKARPYLWRFWRRVPRKGHFAIFDRSWYERVLVERVEGFAGHDDWLRAYNEINEFEQELTDFGYTVCKFWLAISEEEQLRRFKAREETVYKQHKITDEDWRNRLKWDQYAIAAGDMVDRTSTHYAPWTLVSAENKKHARVKVLKTICDRLDEVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARK8</accession>
    <name>A0A0M7ARK8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="11">D-alanyl-lipoteichoic acid biosynthesis protein DltB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">LAX5112_04861</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the membrane-bound acyltransferase family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000033">
        <property type="protein sequence ID" value="CTQ77287.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674009.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000033.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04861"/>
    <dbReference type="EnsemblBacteria" id="CTQ77287">
        <property type="protein sequence ID" value="CTQ77287"/>
        <property type="gene ID" value="LAX5112_04861"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016746">
        <property type="term" value="F:acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042121">
        <property type="term" value="P:alginic acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024194">
        <property type="entry name" value="Ac/AlaTfrase_AlgI/DltB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028362">
        <property type="entry name" value="AlgI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004299">
        <property type="entry name" value="MBOAT_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03062">
        <property type="entry name" value="MBOAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF500217">
        <property type="entry name" value="AlgI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF016636">
        <property type="entry name" value="AlgI_DltB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 9" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="3 9" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7 9 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 9" id="KW-0808">Transferase</keyword>
    <keyword evidence="5 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 10" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="7"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="32"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="76"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="115"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="145"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="177"/>
            <end position="198"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="312"/>
            <end position="332"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="366"/>
            <end position="383"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="420"/>
            <end position="438"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="472"/>
            <end position="492"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010323"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRNR" id="PIRNR016636"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ77287.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="502" mass="56767" checksum="BE0185FA92E44E49" modified="2015-12-09" version="1">MVFSSLEFIYLFLPPVFIGYLVLRHWGWENGIIWWLTIASLVFYAWWTPVYLPLLLGSVVINYGFHRVLRQVRDKFILIAGIVFNLALIAVFKYADFFIGNANLLAGADIPMLNLILPLAISFFTFQQISFLIDTYKGDIIQCDFGRYMLFVVFFPQLIAGPIVMQKETIPQFKLPVFRNKLVLNLAVGSTLFAIGLFKKIVLADGIAPYANQVFSLAETTNGVPLEAAWIGALAYTFQLYFDFSGYCDMALGLARLFGIRLPVNFNSPYKATSISDFWRRWHITLSHFLRDYLYIPLGGNRSGPIRRYSNLMITMLLGGLWHGASWTFVFWGGLHGAYLAINHGWDALSKNGYVPNVLPRPVGNLLSRGITLLAVVVAWVFFRAESFTGASNIIHGMTGFSTVYEPKLWEGALTGTMQVWAMMIALAAIVFLLPNAIEFTEKYNPVLGLKKLVAQRRSEGFLPVRWQPTTGWALGVSVLFGLALIQTYRLAEMTEFIYFNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARZ8</accession>
    <name>A0A0M7ARZ8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Ureidoglycolate lyase</fullName>
            <ecNumber evidence="2">4.3.2.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04783</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="4.3.2.3" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000030">
        <property type="protein sequence ID" value="CTQ77030.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673941.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000030.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04783"/>
    <dbReference type="EnsemblBacteria" id="CTQ77030">
        <property type="protein sequence ID" value="CTQ77030"/>
        <property type="gene ID" value="LAX5112_04783"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050385">
        <property type="term" value="F:ureidoglycolate lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.850.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011234">
        <property type="entry name" value="Fumarylacetoacetase-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036663">
        <property type="entry name" value="Fumarylacetoacetase_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01557">
        <property type="entry name" value="FAA_hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56529">
        <property type="entry name" value="SSF56529"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FAA_hydrolase" evidence="1">
        <location>
            <begin position="72"/>
            <end position="277"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01557"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77030.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="280" mass="29725" checksum="EB02C33612D11348" modified="2015-12-09" version="1">MKLLRHGAPGAEKPGLLDKDGKIRDLTGIVPDIAGAVLSDAGLSALRGIDVEQLPEVTPGTRLGPCVAGTGKFICIGLNYADHAEEAGMDVPPEPIIFMKATSAICGPNDPTLLPRGSEKTDWEAELAVVIGKTAKYVDDSDAIDHVAGYAVANDISERSYQIERSGQWTKGKSCDSFGPVGPWLVTRDDVADPQDLNMWLTVNGEKLQDGSTRTMVYSVAYLVSYLSRFMTLHPGDIISTGTPPGVGMGMKPPRYLMAGDVVELGIEGLGSQRQAVVAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASA8</accession>
    <name>A0A0M7ASA8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_04672</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000028">
        <property type="protein sequence ID" value="CTQ76683.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04672"/>
    <dbReference type="EnsemblBacteria" id="CTQ76683">
        <property type="protein sequence ID" value="CTQ76683"/>
        <property type="gene ID" value="LAX5112_04672"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="26"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="67"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="113"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="113"/>
            <end position="134"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ76683.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="160" mass="17625" checksum="E83F458CBF34D197" modified="2015-12-09" version="1">MSAGIENGDVPHHLPLFITGPGQTDILFVFVVCLVLIILLITGNFYFKLHALPEHMAHGRRSTQFQLVGILALLALFTHQNLYWVAALVLATVRLPDYLTPIESIAESLRLQRPGQSLRDNETKSTTNNSNDMSDVGDERTEGLPSNKVIEDSGSNGQET</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASF5</accession>
    <name>A0A0M7ASF5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Phasin protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04830</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000032">
        <property type="protein sequence ID" value="CTQ77190.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77190">
        <property type="protein sequence ID" value="CTQ77190"/>
        <property type="gene ID" value="LAX5112_04830"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="145"/>
            <end position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77190.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="164" mass="18716" checksum="98F50AFC8339B3DC" modified="2015-12-09" version="1">MPTKRNTTSFDFTGMMPEWPMPAFSNWAFAEREDRMEAKAVASFQKMGETMWTHAGKAFEGHMDFVNHRLHEDFECAKSLSQCTAPEETFATLQAFYSKMTSEYQAHFEKQATLMRESFTENAAAAEELNETAMKTVSELSKAVEESMQEVEKPKARRKTAATL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AT86</accession>
    <name>A0A0M7AT86_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">3-hydroxyacyl-CoA dehydrogenase</fullName>
            <ecNumber evidence="2">1.1.1.35</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">fadJ_3</name>
        <name evidence="10" type="ORF">LAX5112_04773</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>a (3S)-3-hydroxyacyl-CoA + NAD(+) = a 3-oxoacyl-CoA + H(+) + NADH</text>
            <dbReference type="Rhea" id="RHEA:22432"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57318"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:90726"/>
            <dbReference type="EC" id="1.1.1.35"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1">Lipid metabolism; fatty acid beta-oxidation.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.35" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000030">
        <property type="protein sequence ID" value="CTQ77003.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673936.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000030.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04773"/>
    <dbReference type="EnsemblBacteria" id="CTQ77003">
        <property type="protein sequence ID" value="CTQ77003"/>
        <property type="gene ID" value="LAX5112_04773"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00659"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003857">
        <property type="term" value="F:3-hydroxyacyl-CoA dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070403">
        <property type="term" value="F:NAD+ binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006635">
        <property type="term" value="P:fatty acid beta-oxidation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006176">
        <property type="entry name" value="3-OHacyl-CoA_DH_NAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006108">
        <property type="entry name" value="3HC_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008927">
        <property type="entry name" value="6-PGluconate_DH-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029045">
        <property type="entry name" value="ClpP/crotonase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001753">
        <property type="entry name" value="Enoyl-CoA_hydra/iso"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00725">
        <property type="entry name" value="3HCDH"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02737">
        <property type="entry name" value="3HCDH_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00378">
        <property type="entry name" value="ECH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48179">
        <property type="entry name" value="SSF48179"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52096">
        <property type="entry name" value="SSF52096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0276">Fatty acid metabolism</keyword>
    <keyword evidence="4" id="KW-0442">Lipid degradation</keyword>
    <keyword evidence="6" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="5" id="KW-0520">NAD</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="3HCDH_N" evidence="9">
        <location>
            <begin position="301"/>
            <end position="478"/>
        </location>
    </feature>
    <feature type="domain" description="3HCDH" evidence="8">
        <location>
            <begin position="483"/>
            <end position="576"/>
        </location>
    </feature>
    <feature type="domain" description="3HCDH" evidence="8">
        <location>
            <begin position="610"/>
            <end position="694"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00013000"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022832"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022963"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023693"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00725"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF02737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ77003.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="703" mass="75237" checksum="EE89651D77F38CB8" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ATY4</accession>
    <name>A0A0M7ATY4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_04849</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000032">
        <property type="protein sequence ID" value="CTQ77243.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673995.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000032.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04849"/>
    <dbReference type="EnsemblBacteria" id="CTQ77243">
        <property type="protein sequence ID" value="CTQ77243"/>
        <property type="gene ID" value="LAX5112_04849"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017039">
        <property type="entry name" value="Virul_fac_BrkB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30213">
        <property type="entry name" value="PTHR30213"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03631">
        <property type="entry name" value="Virul_fac_BrkB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF035875">
        <property type="entry name" value="RNase_BN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00765">
        <property type="entry name" value="yihY_not_rbn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="36"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="98"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="141"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="184"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="217"/>
            <end position="238"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="250"/>
            <end position="271"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ77243.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="293" mass="31762" checksum="D200D19D31EB1B97" modified="2015-12-09" version="1">MKPMSLYLFAKASFAVLKDAIGHFSRDDGFAMASHVALSGLLAIFPLLIFIASLAGFFGMVGAADTVSELVFDAWPKTVAAPVVREIENVLTVPRSDLLTFGAVAALWFASNGVEALRTALNRAYRQIEKRSFILLRIQSLALVILGAVILLAYTFLVVLAPLGIEALRGFVPQVETFLLSINIARYTLAGSLLIVGLFMTHWLLPSGQRSFSDIWPGVIATLFLWIVSGSAFGAYLARFANYVSTYGGLAGIMTALIFLYICSLAFILGGELNAAIARQRAFRDRQLGQQQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AU05</accession>
    <name>A0A0M7AU05_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative HTH-type transcriptional regulator YdcR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ydcR_2</name>
        <name evidence="3" type="ORF">LAX5112_04793</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">In the C-terminal section; belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000031">
        <property type="protein sequence ID" value="CTQ77074.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673974.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000031.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04793"/>
    <dbReference type="EnsemblBacteria" id="CTQ77074">
        <property type="protein sequence ID" value="CTQ77074"/>
        <property type="gene ID" value="LAX5112_04793"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009058">
        <property type="term" value="P:biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07377">
        <property type="entry name" value="WHTH_GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004839">
        <property type="entry name" value="Aminotransferase_I/II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000524">
        <property type="entry name" value="Tscrpt_reg_HTH_GntR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00155">
        <property type="entry name" value="Aminotran_1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00392">
        <property type="entry name" value="GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00345">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50949">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH gntR-type" evidence="2">
        <location>
            <begin position="11"/>
            <end position="79"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005384"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ77074.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="467" mass="50769" checksum="3E49B328E645E71A" modified="2015-12-09" version="1">MWVPNIEAASGPIYLAIADALEADILAGSLAQGDRLPPQRELAYQLGITLGTVTRAYAEAERRRLVKGETGRGTYVAPESQKVSPLIPKEGEPETCDLARNFAYPFLNPSLSDGLVRMAKTVGIERLNGFVPSEGLKAHRETGVLVFKDYGLDADPDRVAVTCGAQHGIQVTCQALFLPGDAVAVDQFTYPSIFSSLAAQGLKAIPVPALTGGGGGLGAMDPDVLAQAVRMHHVKGVFLMPNMQNPTTHTMSIDERTRLVEVARQFDLKVIEDDPYTPFLADPLPAFGALAPERTASIASISKVCSPGSRIGFVHVPAPFEDSIRNKIGESTWMASPITAELISGWVREGHLSKALRVKRRANSVRFDRARKILEPYFLQSGSHKVFGWLALPEDVDPDALQTALSHQGISVLSSRYFQAKGQKPAPYIRLTFGSEENEDRFDWALDRIKTTISTFAEPPDLIRPVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AUK4</accession>
    <name>A0A0M7AUK4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Putative beta-lactamase HcpC</fullName>
            <ecNumber evidence="1">3.5.2.6</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">hcpC</name>
        <name evidence="1" type="ORF">LAX5112_04860</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.5.2.6" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000033">
        <property type="protein sequence ID" value="CTQ77284.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674008.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000033.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04860"/>
    <dbReference type="EnsemblBacteria" id="CTQ77284">
        <property type="protein sequence ID" value="CTQ77284"/>
        <property type="gene ID" value="LAX5112_04860"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008800">
        <property type="term" value="F:beta-lactamase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006597">
        <property type="entry name" value="Sel1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08238">
        <property type="entry name" value="Sel1"/>
        <property type="match status" value="7"/>
    </dbReference>
    <dbReference type="SMART" id="SM00671">
        <property type="entry name" value="SEL1"/>
        <property type="match status" value="8"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ77284.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="408" mass="44675" checksum="232DDA6F0F70087F" modified="2015-12-09" version="1">MTRKPLNRNILKAAFVAAIIGGAGVVALSGDAVRPAAKAERIDPTIEEMIKQARGLQKVGRWEAAADLLTQLASDGHPVALYHLGRAYKNGWGVDADLDQARLVFMEAVRYSFAYRGETAYELGRLFQRSSGERCAEIALQWFRKALGWDYPKAHVQLAKHYERGIGTQRDLTLAFHHYEKAAIAGYPSSTINYARILLNGRYGSTPNPEQALFWAERAIAGLEKKARDGSASSAKTLGRLYRDGEFMTADRALARDWFLRSADLGDAGAMHDLALMMLATSDDKGSVQEALKWLRLAAKAEHGGALTGLARLHLKEKHGLDADAAVELLERGVAAGHPGAMEELGRLYAKGKLVEQDRTKAFELARKGADRGHQGSATLLEELQKTDEANLTILLRSTPQDTSKKEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZLH9</accession>
    <name>A0A0M6ZLH9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">CENP-V/GFA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_00008</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the Gfa family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63625.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670076.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00008"/>
    <dbReference type="EnsemblBacteria" id="CTQ63625">
        <property type="protein sequence ID" value="CTQ63625"/>
        <property type="gene ID" value="LAX5112_00008"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016846">
        <property type="term" value="F:carbon-sulfur lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006913">
        <property type="entry name" value="CENP-V/GFA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011057">
        <property type="entry name" value="Mss4-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04828">
        <property type="entry name" value="GFA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51316">
        <property type="entry name" value="SSF51316"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51891">
        <property type="entry name" value="CENP_V_GFA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CENP-V/GFA" evidence="3">
        <location>
            <begin position="1"/>
            <end position="115"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005495"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51891"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ63625.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="122" mass="13311" checksum="170836F44DA554C1" modified="2015-12-09" version="1">MKGSCLCGRVTYEVTGPLRPVIACHCVQCRKTSGHFVAATQAAKKDLRINGEDNLTWFQSSDSARRGFCTACGSQLFWEPDGQDVVSIMAGTLDGPTGLQISHHIHCETKGDYYLLTDRASD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZML1</accession>
    <name>A0A0M6ZML1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Outer membrane efflux protein BepC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">bepC_1</name>
        <name evidence="4" type="ORF">LAX5112_00143</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63998.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00143"/>
    <dbReference type="EnsemblBacteria" id="CTQ63998">
        <property type="protein sequence ID" value="CTQ63998"/>
        <property type="gene ID" value="LAX5112_00143"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019867">
        <property type="term" value="C:outer membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015562">
        <property type="term" value="F:efflux transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003423">
        <property type="entry name" value="OMP_efflux"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010130">
        <property type="entry name" value="T1SS_OMP_TolC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02321">
        <property type="entry name" value="OEP"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01844">
        <property type="entry name" value="type_I_sec_TolC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809140" evidence="3">
        <location>
            <begin position="36"/>
            <end position="463"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ63998.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="463" mass="49660" checksum="26805B5D115B0B6B" modified="2015-12-09" version="1">MSGRSSVKAMALTKGLMSGVAAVVLSGFIASSASADTIRDALSLAYANNPTLNAARAQLRGVNENVPQALAGWRPTASAALAAGGVRSSINGRQAYRNNAAISLTLSQAVFRGFRTVNSTRQAEAVVRAQRESLMSSEQDTLLSAATAYVDVIRDTALVSLQRSDLAFLQEQVRAARDRFDVGEGTRTDVSQAEARAAEAQASLNTALANLNTSRAIYRQVIGVDPKSLSADTSITRQVPKSLDVALQTSEEKQPLIQQALHLVDAAIFNVKTIEGELLPTVSVDASVGRNWNPSNTIDLSNEAQIFGNVSIPIYQGGGVYSRVRQAKEELGQTRLQLDVARDQVRANVITAWGIFQAAEASIVAARAAVEAQQLALEGVIEEQRVGQRTTLDVLDAQRELVIQQSNLVTAQRNRIVGGYQLVAAVGQLDAESLSLNVNVYNPEQHYRSVRGKWIGLRTPDGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZMR5</accession>
    <name>A0A0M6ZMR5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Deoxyguanosinetriphosphate triphosphohydrolase-like protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">dgt</name>
        <name evidence="3" type="ORF">LAX5112_00164</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the dGTPase family. Type 2 subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64059.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00164"/>
    <dbReference type="EnsemblBacteria" id="CTQ64059">
        <property type="protein sequence ID" value="CTQ64059"/>
        <property type="gene ID" value="LAX5112_00164"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016793">
        <property type="term" value="F:triphosphoric monoester hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00077">
        <property type="entry name" value="HDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01212">
        <property type="entry name" value="dGTPase_type2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006261">
        <property type="entry name" value="dNTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023023">
        <property type="entry name" value="dNTPase_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003607">
        <property type="entry name" value="HD/PDEase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006674">
        <property type="entry name" value="HD_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026875">
        <property type="entry name" value="PHydrolase_assoc_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01966">
        <property type="entry name" value="HD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13286">
        <property type="entry name" value="HD_assoc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00471">
        <property type="entry name" value="HDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01353">
        <property type="entry name" value="dGTP_triPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51831">
        <property type="entry name" value="HD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HD" evidence="2">
        <location>
            <begin position="79"/>
            <end position="227"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01212"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51831"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ64059.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="412" mass="47058" checksum="8B273981F0760104" modified="2015-12-09" version="1">MNDNWKKIQADIGYGAQSLAVYAQNPFKSRGRLFPEPESPTRTPFQRDRDRIIHSSAFRRLKHKTQVFVYHEGDHFRTRLTHTIEVSQIARSLARALRLDEDLAECLALAHDLGHTPFGHEGEDVMHECMAPYGGFDHNAQSLRVVTRLEHRYAEFDGLNLAWETLEGLVKHNGPLVDDAGAPLGKFKDGELPFAIREYQRQQDLMLGTWPSAEAQAAAIADDIAYDAHDLDDGLRAGLFAIDDMREVPFLADILAEVDHKYPGLEETRRIHEIVRRSITRMVEDVIQEGVRNIIEVDPQNVEDVRTAGKCLVGFSPSMIAAEKEVKRFLFARVYRHEDVLSVRRLVARVVRDLFARLLAEPNLMPAPWDRGLESLDETRKARRVCDYIAGMTDRYAIEEHRRLFDDTPDLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZNJ5</accession>
    <name>A0A0M6ZNJ5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Urea ABC transporter, substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00067</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63792.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008193215.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00067"/>
    <dbReference type="EnsemblBacteria" id="CTQ63792">
        <property type="protein sequence ID" value="CTQ63792"/>
        <property type="gene ID" value="LAX5112_00067"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028081">
        <property type="entry name" value="Leu-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006311">
        <property type="entry name" value="TAT_signal"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13458">
        <property type="entry name" value="Peripla_BP_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peripla_BP_6" evidence="1">
        <location>
            <begin position="47"/>
            <end position="408"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13458"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ63792.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="451" mass="48083" checksum="895B3219BAF24A58" modified="2015-12-09" version="1">MSLIYKPLNRRSILRAGALGGTALAMPTVFTSRAWSQGYLNEPTGSTVTLGFNVPQTGPYAEEGADELRAYELAVEHLNGEGDGGMMGTFSSKALKGNGILGKKVEYVTGDTQTKSDAARASAKSMIEKDGAIMITGGSSSGVAVAVQALCQEAGVIFMAGLTHSNDTTGKDKRANGFRHFFNSYMSGAALAPVLKNAYGDDRKAYHLTADYNWGYTTEQAVKESTEALGWETVETVKTPLAATDFSAYITPVLQSDADVLVLNHYGGNMVNSLTNAVQFGLRDKVVNGKNFEIIVPLYSRLMAKGAGANVKGIFGSTNWHWSLQDEGSKAFVKSFGQKYGFPPSQAAHTTYVQALLYADACERAGTFNPCGVVEALEGFEFDGLGNGKTLYRAEDHQCFKDVLVVKGKENPTSDFDLLEIVEVTPASQVTYAPDHPQFAGGALGTCNPGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPZ5</accession>
    <name>A0A0M6ZPZ5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Thiol:disulfide interchange protein DsbD</fullName>
            <ecNumber evidence="3">1.8.1.8</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">dsbD_1</name>
        <name evidence="3" type="ORF">LAX5112_00211</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.8.1.8" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64190.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670210.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ64190">
        <property type="protein sequence ID" value="CTQ64190"/>
        <property type="gene ID" value="LAX5112_00211"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047134">
        <property type="term" value="F:protein-disulfide reductase (NAD(P)) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017004">
        <property type="term" value="P:cytochrome complex assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003834">
        <property type="entry name" value="Cyt_c_assmbl_TM_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02683">
        <property type="entry name" value="DsbD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="56"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="91"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="132"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="166"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="211"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="domain" description="DsbD" evidence="2">
        <location>
            <begin position="10"/>
            <end position="225"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02683"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ64190.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="246" mass="26494" checksum="D36F20D28BDCF5E4" modified="2015-12-09" version="1">MIQDVTIIGALLAGVLSFVSPCVLPLVPPYLGYLAGVSLDQLTGEDDTDEAASRRVFFSALVFVLGFSTVFVLLGATASFLGQFIRMYLDYLGYIAGAAIVMMGLHFLGVFKIGFLYKEARVHVDQKPAGPMGAYVIGLAFGFGWTPCVGPILAAILFVAGAKDTVLQGTVLLAAYALGLGIPFLIAALFARPFLRFMKRFRKHMGTVEKAMGGVLVLTGIMFLTGQMAVFSYWLLETFPAFQYIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQ98</accession>
    <name>A0A0M6ZQ98_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Trk system potassium uptake protein TrkA</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">trkA</name>
        <name evidence="8" type="ORF">LAX5112_00245</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64290.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670233.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00245"/>
    <dbReference type="EnsemblBacteria" id="CTQ64290">
        <property type="protein sequence ID" value="CTQ64290"/>
        <property type="gene ID" value="LAX5112_00245"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015079">
        <property type="term" value="F:potassium ion transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1450">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006036">
        <property type="entry name" value="K_uptake_TrkA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006037">
        <property type="entry name" value="RCK_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036721">
        <property type="entry name" value="RCK_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003148">
        <property type="entry name" value="RCK_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02080">
        <property type="entry name" value="TrkA_C"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02254">
        <property type="entry name" value="TrkA_N"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00335">
        <property type="entry name" value="KUPTAKETRKA"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF116726">
        <property type="entry name" value="SSF116726"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51202">
        <property type="entry name" value="RCK_C"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51201">
        <property type="entry name" value="RCK_N"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0406">Ion transport</keyword>
    <keyword evidence="4" id="KW-0520">NAD</keyword>
    <keyword evidence="3" id="KW-0630">Potassium</keyword>
    <keyword evidence="2" id="KW-0633">Potassium transport</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="domain" description="RCK N-terminal" evidence="6">
        <location>
            <begin position="2"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="domain" description="RCK C-terminal" evidence="7">
        <location>
            <begin position="144"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="domain" description="RCK N-terminal" evidence="6">
        <location>
            <begin position="235"/>
            <end position="358"/>
        </location>
    </feature>
    <feature type="domain" description="RCK C-terminal" evidence="7">
        <location>
            <begin position="372"/>
            <end position="453"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00017378"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022538"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022958"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51201"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51202"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ64290.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="458" mass="49705" checksum="A00FF9ED466FD728" modified="2015-12-09" version="1">MKIVICGAGQVGYGIAERLAAEQNDVSVIDSSPKLIDAIGDQLDVRGFVGHGAHPDVLAQAGAEEADMIVAVTLYDEVNMVACQVAHSLFNVPTKVARIRAQSYLQGRWRNLFSRENMPIDVIISPEIEVGEMVLRRLALPGAVETVRFADDNVVVVGIMCEDDCPVVDTPLHQLTELFPDLGAVVVGLYRNNKLFVPKSSDSIYTGDLAYVVAKRDQVRRTLSIFGHEEPEAGKVVIAGGGNIGLYVARALEQRQAGTKIKLIEASRERAISVADDLKRSVILHGSALDLTILNEADAGDADTMVALTNEDEVNILSSVMAKKLGCKRSLSLLNNPSYPAFTNALGIDAFINPRAVTISKILQHVRRGRIRGVHTLQNGAAEIVEAEALDTSPLVGRPLRMIDLPSGIRIGAVFRDGEVLTPNGDLQIQAKDRIVIFAVASRVRQVEQMFRVSLDFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQJ1</accession>
    <name>A0A0M6ZQJ1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Trehalose utilisation</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00475</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64998.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670427.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00475"/>
    <dbReference type="EnsemblBacteria" id="CTQ64998">
        <property type="protein sequence ID" value="CTQ64998"/>
        <property type="gene ID" value="LAX5112_00475"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029010">
        <property type="entry name" value="ThuA-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06283">
        <property type="entry name" value="ThuA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="SSF52317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ThuA" evidence="1">
        <location>
            <begin position="5"/>
            <end position="230"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF06283"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64998.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="245" mass="27924" checksum="6D7452145053A3B9" modified="2015-12-09" version="1">MRAALFVGGWEGHAPTHFSDWYRDLLEKNGFTVDVYDTMGPLEHPEDLHDLDLITPIWSSARSGHQEEFGNMTKPQEDGLLKLIGDGCGIAGWHGHMGDAFRDRPTYHFLIGGQFVAHPPGWPDNLQPKEDYIDYDVTICRPDDPIVKGIKSFRLTSEQYYMLVDPSNEVLATTTFSGEHLWWIEGTVIPVVWKRRWDKGRVFYCSIGHELNDLKVPQVTEIIRRGSIWAAEGKQQSGYENTGCF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZR10</accession>
    <name>A0A0M6ZR10_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Flp pilus assembly protein TadG</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00546</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65205.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00546"/>
    <dbReference type="EnsemblBacteria" id="CTQ65205">
        <property type="protein sequence ID" value="CTQ65205"/>
        <property type="gene ID" value="LAX5112_00546"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012495">
        <property type="entry name" value="TadE"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07811">
        <property type="entry name" value="TadE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="37"/>
            <end position="60"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65205.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="189" mass="21124" checksum="785535B1A1D5CE39" modified="2015-12-09" version="1">MLNGSHNRNIKGLRRLAQRSCARKLARNKEGATAIEFALVALPFFTVVFAILELGLAFIVNRMVDNAVIEASRKIRTGQASQANFSTANFRDQVCASMPAFLCSAERIRVNVSVANDFVNVNSIDSLYDEDGNLKDDNAYTQSQKSEIVAVNVIYKWPMFTSFLNLSALDHGNERHLSSTMVFRNEPWS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRA4</accession>
    <name>A0A0M6ZRA4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="11">ATP-dependent RNA helicase RhlE</fullName>
            <ecNumber evidence="11">3.6.4.13</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">rhlE_1</name>
        <name evidence="11" type="ORF">LAX5112_00159</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="6">Belongs to the DEAD box helicase family.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.13" evidence="11"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64044.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670176.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00159"/>
    <dbReference type="EnsemblBacteria" id="CTQ64044">
        <property type="protein sequence ID" value="CTQ64044"/>
        <property type="gene ID" value="LAX5112_00159"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003724">
        <property type="term" value="F:RNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000629">
        <property type="entry name" value="RNA-helicase_DEAD-box_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014014">
        <property type="entry name" value="RNA_helicase_DEAD_Q_motif"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00039">
        <property type="entry name" value="DEAD_ATP_HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51195">
        <property type="entry name" value="Q_MOTIF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 6 11" id="KW-0347">Helicase</keyword>
    <keyword evidence="2 6 11" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Q_MOTIF" evidence="10">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase ATP-binding" evidence="8">
        <location>
            <begin position="32"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase C-terminal" evidence="9">
        <location>
            <begin position="234"/>
            <end position="383"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="386"/>
            <end position="480"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="Q motif" evidence="5">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="433"/>
            <end position="458"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU000492"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51195"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ64044.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="480" mass="53293" checksum="F2EA32EC56747898" modified="2015-12-09" version="1">MSFNTLGLSEKVLAAVDAAGYKDPTAIQAGAIPQVLERRDVLGIAQTGTGKTASFTLPMLTLLEKGRARARMPRTLILEPTRELAAQVQENFERYGTNHKLNVALLIGGVSFAEQDKKLDRGTDVLIATPGRLLDHFERGKLLLQGVEILVIDEADRMLDMGFIPDIERICKLIPFTRQTLFFSATMPPEIQRLTETFLQNPARIEVAPTSSTAENVTQQLKAAGGKDYDKRVALRELLEGAEDLQNAIVFCNRKRDISTLFRSLERHEYNVGALHGDMDQRTRMMMLDNFRKGAIKLLVASDVAARGLDIPEVSHVFNYDVPINAEDYVHRIGRTGRAGRSGTAYTLVTESDQKYLRAIEELTNQSIEWVGESIDFEAAAAERKAKRRSSKTSKADSSNDNDAAQSKPAPKKRGQSRRKTEEPAPETPVEETRPTSRVQKISQKPANKSQKQDNNAPAFSEGVHIPAFLLRDPRAKKAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRI0</accession>
    <name>A0A0M6ZRI0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Leucine/isoleucine/valine transporter permease subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_00417</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64831.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008194068.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00417"/>
    <dbReference type="EnsemblBacteria" id="CTQ64831">
        <property type="protein sequence ID" value="CTQ64831"/>
        <property type="gene ID" value="LAX5112_00417"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015658">
        <property type="term" value="F:branched-chain amino acid transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06581">
        <property type="entry name" value="TM_PBP1_LivM_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001851">
        <property type="entry name" value="ABC_transp_permease"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043428">
        <property type="entry name" value="LivM-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30482">
        <property type="entry name" value="PTHR30482"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02653">
        <property type="entry name" value="BPD_transp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="6"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="36"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="69"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="146"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="197"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="229"/>
            <end position="261"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ64831.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="320" mass="34831" checksum="CACBB84C993818AE" modified="2015-12-09" version="1">MEFLGLVNYALFMAIFIAIYALLVLGLNIQWGFAGLFNAGIAGFFAVGAYTSAILTTEAADGRIGGFDLHFVIGWIGAMIAAALVAWPIGKICLRFRSDYLAIASIGIAEIIRLVIKSEPALTNGARGIPGIPRPMSDIGYMESQVAYLIIVLAVLIAAYVLVERQFNAPWGRMMRAIRDNEDAAKAMGKDVEFRRLEAFIFGAALMGLGGALFAHFNRSITPEAIDPMVATFLVWIMLILGGSGNNRGAILGAAVVWIIWSVSEIATDRLPHEYAIQAKYIRLFLIGLMLQLVLRFRPEGLLPEPLRGDQRSAKDGADH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRT1</accession>
    <name>A0A0M6ZRT1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">HTH-type transcriptional regulator BetI</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">fadR_1</name>
        <name evidence="4" type="synonym">betI</name>
        <name evidence="7" type="ORF">LAX5112_00407</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Repressor involved in choline regulation of the bet genes.</text>
    </comment>
    <comment type="function">
        <text evidence="3">Repressor involved in the biosynthesis of the osmoprotectant glycine betaine. It represses transcription of the choline transporter BetT and the genes of BetAB involved in the synthesis of glycine betaine.</text>
    </comment>
    <comment type="pathway">
        <text evidence="1 4">Amine and polyamine biosynthesis; betaine biosynthesis via choline pathway [regulation].</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64800.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670380.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00407"/>
    <dbReference type="EnsemblBacteria" id="CTQ64800">
        <property type="protein sequence ID" value="CTQ64800"/>
        <property type="gene ID" value="LAX5112_00407"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00529"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019285">
        <property type="term" value="P:glycine betaine biosynthetic process from choline"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045892">
        <property type="term" value="P:negative regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00768">
        <property type="entry name" value="HTH_type_BetI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039538">
        <property type="entry name" value="BetI_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023772">
        <property type="entry name" value="DNA-bd_HTH_TetR-type_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036271">
        <property type="entry name" value="Tet_transcr_reg_TetR-rel_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017757">
        <property type="entry name" value="Tscrpt_rep_BetI"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13977">
        <property type="entry name" value="TetR_C_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00440">
        <property type="entry name" value="TetR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00455">
        <property type="entry name" value="HTHTETR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48498">
        <property type="entry name" value="SSF48498"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03384">
        <property type="entry name" value="betaine_BetI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01081">
        <property type="entry name" value="HTH_TETR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50977">
        <property type="entry name" value="HTH_TETR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4" id="KW-0678">Repressor</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="4" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH tetR-type" evidence="6">
        <location>
            <begin position="8"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="4 5">
        <location>
            <begin position="31"/>
            <end position="50"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004719"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00024936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00768"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ64800.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="200" mass="22121" checksum="8C692B093CD5DAB9" modified="2015-12-09" version="1">MPKVGMEEERRRSLINATVDAIHERGYSDVTMAQIAKRAGVSGGLVHHYFGSKDQLLAATMRHLLTELGREIQEGLSKASTPRERISAIIAGNFAVDQFQPAVIAAWLAFYVQSRTTTSNRRLLKIYAARLASNLTHNFKAFVPREDALRLAEGTASMIDGVWIRQALSDIKTDRQAAIALVENYVETQIAAVTAQRPSQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSH2</accession>
    <name>A0A0M6ZSH2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex</fullName>
            <ecNumber evidence="3">2.3.1.12</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">aceF</name>
        <name evidence="3" type="ORF">LAX5112_00489</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the 2-oxoacid dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.12" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65040.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670440.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00489"/>
    <dbReference type="EnsemblBacteria" id="CTQ65040">
        <property type="protein sequence ID" value="CTQ65040"/>
        <property type="gene ID" value="LAX5112_00489"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045254">
        <property type="term" value="C:pyruvate dehydrogenase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004742">
        <property type="term" value="F:dihydrolipoyllysine-residue acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006096">
        <property type="term" value="P:glycolytic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.559.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.320.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001078">
        <property type="entry name" value="2-oxoacid_DH_actylTfrase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006256">
        <property type="entry name" value="AcTrfase_Pyrv_DH_cplx"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023213">
        <property type="entry name" value="CAT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036625">
        <property type="entry name" value="E3-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004167">
        <property type="entry name" value="PSBD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43178:SF2">
        <property type="entry name" value="PTHR43178:SF2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00198">
        <property type="entry name" value="2-oxoacid_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51826">
        <property type="entry name" value="PSBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="3" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Peripheral subunit-binding (PSBD)" evidence="2">
        <location>
            <begin position="4"/>
            <end position="41"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007317"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51826"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ65040.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="300" mass="32240" checksum="19023C78F908CFB5" modified="2015-12-09" version="1">MTYIASPSVRSYAGRNGVDLDAVAAASGRRNLAKEDVDRHLSRDVSDTGASAAVSHGNRYWDVDHTLHGPVSDEPVSRMAQVAADNLSAANAHIPQVTHHDRADIRKVEAFRSKLTEEALDRGIKLTTLAFHVKALSACLKAFPKFNSSLSADGQTLHMKTYVHVGIAVDTPAGLMVPVVRDADRKGLWQIASDITDLAGRAQARKIRPDEMGGASMSISNLGGIGGTAFTPIVNPPEVAILGITRTETIAVWENESFVPVPMVPLDLSYDHRVINGADAARFLKHYAGLLADPRRLLIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSW7</accession>
    <name>A0A0M6ZSW7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Efflux pump periplasmic linker BepF</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">bepF_2</name>
        <name evidence="4" type="ORF">LAX5112_00585</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65316.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00585"/>
    <dbReference type="EnsemblBacteria" id="CTQ65316">
        <property type="protein sequence ID" value="CTQ65316"/>
        <property type="gene ID" value="LAX5112_00585"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032317">
        <property type="entry name" value="HlyD_D23"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006143">
        <property type="entry name" value="RND_pump_MFP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16576">
        <property type="entry name" value="HlyD_D23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01730">
        <property type="entry name" value="RND_mfp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="25"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="domain" description="HlyD_D23" evidence="3">
        <location>
            <begin position="93"/>
            <end position="288"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF16576"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ65316.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="401" mass="43515" checksum="96218E3AB0EA2286" modified="2015-12-09" version="1">MPKDHQTPAPNTTGSNSRLRRFGRMALSTATFSINVGLAAAAVMIGVTTIQMRAEEKPSVDPSPLAVVDVFTPDWETGYDVERSFVGRLEPARSTDLAFELSGTVREVRVDEGDLVEEGAVIAVLDTRSIEADRRRQVANRQAAESDRELAMLTLNRRQLLKDNGHVSAQVLDEARLTLSRLDATIAQIDAAIENIDINLDKAVLKAPFSGRVGERLLDDGATASPATPVLRLLESSRPTVRIGLSPEVVDRLDKSQTHDIQISARTFKASLSALRPDLQTRTRTIEALFILDTPEATPAFGRLAELSVFERVETEGAWIPVSALKEGPRGLWTVLTVAKDVDQAAPGQAYVVLREAVEVLHAEEGRAFVRGTLTPDSRIVRDGVHRVVVGQAVDLAKAGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTK5</accession>
    <name>A0A0M6ZTK5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">N-acetylglucosamine-6-phosphate deacetylase</fullName>
            <ecNumber evidence="8">3.5.1.25</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">nagA</name>
        <name evidence="8" type="ORF">LAX5112_00704</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </cofactor>
        <text evidence="6">Binds 1 divalent metal cation per subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the metallo-dependent hydrolases superfamily. NagA family.</text>
    </comment>
    <dbReference type="EC" id="3.5.1.25" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65637.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670643.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00704"/>
    <dbReference type="EnsemblBacteria" id="CTQ65637">
        <property type="protein sequence ID" value="CTQ65637"/>
        <property type="gene ID" value="LAX5112_00704"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047419">
        <property type="term" value="F:N-acetylgalactosamine-6-phosphate deacetylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008448">
        <property type="term" value="F:N-acetylglucosamine-6-phosphate deacetylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006044">
        <property type="term" value="P:N-acetylglucosamine metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00854">
        <property type="entry name" value="NagA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006680">
        <property type="entry name" value="Amidohydro-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003764">
        <property type="entry name" value="GlcNAc_6-P_deAcase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011059">
        <property type="entry name" value="Metal-dep_hydrolase_composite"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032466">
        <property type="entry name" value="Metal_Hydrolase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11113:SF14">
        <property type="entry name" value="PTHR11113:SF14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01979">
        <property type="entry name" value="Amidohydro_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF038994">
        <property type="entry name" value="NagA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51338">
        <property type="entry name" value="SSF51338"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51556">
        <property type="entry name" value="SSF51556"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00221">
        <property type="entry name" value="nagA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="3 8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Amidohydro-rel" evidence="7">
        <location>
            <begin position="53"/>
            <end position="346"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="5">
        <location>
            <begin position="221"/>
            <end position="222"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="5">
        <location>
            <begin position="310"/>
            <end position="312"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor/acceptor" evidence="4">
        <location>
            <position position="277"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="131"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="142"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="197"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="218"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="229"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="253"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010716"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRNR" id="PIRNR038994"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR038994-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR038994-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR038994-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF01979"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ65637.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="379" mass="39415" checksum="2B702C87938E35A6" modified="2015-12-09" version="1">MTQTIVFKAAAVFDGGKIHEGAAVRFGPDGLVAFGAGDEIFSGADVIDLGSQIISPGFVDLQVNGGGGVMLNDDPSVETLLRIAEAHWSLGTRAFLPTLITDTREKTKAAIAAVTQAVEKDIPGVAGLHLEGPHLSVARKGAHDAAYIRPMDDEDLDFLMAAARSLPALLLTIAPENTSHEQVRQLNQAGALVSIGHSDADFATVQAYAAAGARCVTHLFNAMSQMGNREPGVVGAALGTGALSAGLIADGIHVHPEMMRIALSAKSGPGEVFLVSDAMAVAGTSETSFELDGRKILRSDGRLTLEDGTLAGADLDLLTAVRVLVDQVDIPLADALRAATKTPAELIDGKPFNLLGRSKDSFIRISKDLQSLSPLAETG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZU10</accession>
    <name>A0A0M6ZU10_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">braC_2</name>
        <name evidence="3" type="ORF">LAX5112_00451</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64933.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670410.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00451"/>
    <dbReference type="EnsemblBacteria" id="CTQ64933">
        <property type="protein sequence ID" value="CTQ64933"/>
        <property type="gene ID" value="LAX5112_00451"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028081">
        <property type="entry name" value="Leu-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13458">
        <property type="entry name" value="Peripla_BP_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809073" evidence="1">
        <location>
            <begin position="24"/>
            <end position="418"/>
        </location>
    </feature>
    <feature type="domain" description="Peripla_BP_6" evidence="2">
        <location>
            <begin position="39"/>
            <end position="341"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13458"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ64933.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="418" mass="43106" checksum="EE9A1532DD535F23" modified="2015-12-09" version="1">MKKALVFAAVAAGMTTLSTGVQAQDCTTKIGAALPTSVDWGRPIAEVAQFAVDQVNEAGGAGGCSIEMVLRDTQVDPKVGVDAAKALVDLEGVKVLLGAVSSGVSMPILTSVTVPSGVMQMSCCSSSTAFTKLSEEGKTNGLWFRTFATTGVQSAMGAKVAADKGWKSVAILYKNDDWGQDMSRLIAADFAAAGVEVTANVAINDAQPSYRAEVTEALTSQPDALYLALYPTEGKSAVREWISLGGTQNMILANSLKSDEFRDSVGLQYLGNAFGTDTASPRVESADAFKAAYEAKFGSQPNGPGLANSYDAAMIALLAMEAAGKDASGADIAAAVTKVTDPNGTAITADIAGFNAAKTTLAEGGTVMYQGATGNVRFDANGDVSAPAVVWKFTDSGTEEVEYLSLTEVDAFIASLKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZU18</accession>
    <name>A0A0M6ZU18_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">LIV-I protein F</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">livF_4</name>
        <name evidence="6" type="ORF">LAX5112_00455</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64943.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670413.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00455"/>
    <dbReference type="EnsemblBacteria" id="CTQ64943">
        <property type="protein sequence ID" value="CTQ64943"/>
        <property type="gene ID" value="LAX5112_00455"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="6"/>
            <end position="253"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="38"/>
            <end position="45"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ64943.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="257" mass="27584" checksum="1D97A3888606DD7B" modified="2015-12-09" version="1">MGEPILRLLDVSRAFGDFRAVDGVSLDIRSGSITGLIGPNGAGKSTLFNVVAGDLMPSAGRVVFDGKDISSLAPERRFAAGLGRTFQIPRPFKRMSVLENVMLAPLDQSGEGLLAPVFGRARIRKEESTIRKRALEVLDFVTLRPLADQPAGKISGGQMKLLELARALMGDPKLILLDEPAAGVNPALTEVLIGKIEELNRSGKTFLIIEHDMDFVMRHCDPVIALAEGRVVFEGSAEEAQSNPVLLEAYLGAPVDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUI7</accession>
    <name>A0A0M6ZUI7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">HTH-type transcriptional regulatory protein GabR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">gabR_1</name>
        <name evidence="3" type="ORF">LAX5112_00736</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">In the C-terminal section; belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65730.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00736"/>
    <dbReference type="EnsemblBacteria" id="CTQ65730">
        <property type="protein sequence ID" value="CTQ65730"/>
        <property type="gene ID" value="LAX5112_00736"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009058">
        <property type="term" value="P:biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07377">
        <property type="entry name" value="WHTH_GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004839">
        <property type="entry name" value="Aminotransferase_I/II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000524">
        <property type="entry name" value="Tscrpt_reg_HTH_GntR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00155">
        <property type="entry name" value="Aminotran_1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00392">
        <property type="entry name" value="GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00345">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50949">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH gntR-type" evidence="2">
        <location>
            <begin position="20"/>
            <end position="88"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005384"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ65730.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="489" mass="55071" checksum="4B7BC2F9A63E3F7C" modified="2015-12-09" version="1">MDPDVAIKSEQFHLDPKFEGTLQQQIQHLVSQGVLSGRFLPGERMPSSRKLAEWLGVSRITVTLAYAELVANDYLTSRGRSGYFVSESAPPPPMLNQSEGDRQDAVAWDEMVSSRYSYRSSLVRPSDWRDYPYPFIYGQPDARLFDHDNWRRCALEALGRKNFESMTADPYEQDDPKLIEYIVRNILPRRGISAQQDEILVTMGAQNALWLCAQVLLNKDRVAAIENPCYPGLRDILDQTGCQIAEVRVDDDGLPPDELPGNCQVVFTTASHQCPTNTTMPIERRRALLNRSVEEGFVIVEDDYEFEMAFQKAPTPALKSLDRAGSVIYVGSFSKSLFPGLRLGYIVAAKPLIQEARSLRALVLRHPPGHIQRTTAYFLSLGYHDAMVNRMGQAYRRRRSVMDKAIRDHGLQIASGGSHGGSSFWMRAPEGVNTSELALKLRKSGVVIDQGRAFFGREDDNHQFYRLAYSSIPSARIPEGIQRIADVIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUU2</accession>
    <name>A0A0M6ZUU2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Uridylate kinase</fullName>
            <ecNumber evidence="4">2.7.4.22</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">Uridine monophosphate kinase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="10" type="primary">pyrH_1</name>
        <name evidence="10" type="ORF">LAX5112_00772</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + UMP = ADP + UDP</text>
            <dbReference type="Rhea" id="RHEA:24400"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:57865"/>
            <dbReference type="ChEBI" id="CHEBI:58223"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.4.22"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Pyrimidine metabolism; CTP biosynthesis via de novo pathway; UDP from UMP (UMPK route): step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the UMP kinase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.4.22" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65830.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00772"/>
    <dbReference type="EnsemblBacteria" id="CTQ65830">
        <property type="protein sequence ID" value="CTQ65830"/>
        <property type="gene ID" value="LAX5112_00772"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00159">
        <property type="reaction ID" value="UER00275"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033862">
        <property type="term" value="F:UMP kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044210">
        <property type="term" value="P:'de novo' CTP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1160.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036393">
        <property type="entry name" value="AceGlu_kinase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001048">
        <property type="entry name" value="Asp/Glu/Uridylate_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011817">
        <property type="entry name" value="Uridylate_kinase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00696">
        <property type="entry name" value="AA_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005650">
        <property type="entry name" value="Uridylate_kin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53633">
        <property type="entry name" value="SSF53633"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="10" id="KW-0418">Kinase</keyword>
    <keyword evidence="7" id="KW-0665">Pyrimidine biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="AA_kinase" evidence="9">
        <location>
            <begin position="1"/>
            <end position="211"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001018"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004791"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00016403"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00032092"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF00696"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ65830.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="241" mass="25741" checksum="D6427DD596CBC3C2" modified="2015-12-09" version="1">MRLLVKVSGEALAEGSAGVFSDAAISRVSSHFVALAERGHEVAVVVGGGNIFRGTSSSDWNIEHVEADNVGMLGTIANGILLRAKVEATSNLEVRLMSAVDIPAIGEKYIRRRALRHLEKGRLVILSGGIGQPFVTTDYPSVQRAVELECASVLCLKNGIDGVYDSDPKTNPDAKRYRTLSIETAITNSLGFMDRSALVLAKQHNVHVHVIGVDTGIDVVDAVASDAVGTRVSRDAESKFY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVE3</accession>
    <name>A0A0M6ZVE3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ParA-like protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01078</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66749.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040453249.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01078"/>
    <dbReference type="EnsemblBacteria" id="CTQ66749">
        <property type="protein sequence ID" value="CTQ66749"/>
        <property type="gene ID" value="LAX5112_01078"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002586">
        <property type="entry name" value="CobQ/CobB/MinD/ParA_Nub-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01656">
        <property type="entry name" value="CbiA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CbiA" evidence="1">
        <location>
            <begin position="6"/>
            <end position="183"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01656"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66749.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="213" mass="22281" checksum="90ED0F2F837EBDFB" modified="2015-12-09" version="1">MSGRILTVAQQKGGSGKTTLAAHLAVALAAKSGEPVAILDVDPQGSLGTWYEAREETLGEDETGLEFRTASGWGARREARSLARSHGYVIIDTPPKTDTDAKPAIDAADFVIVPIQPTPVDLWATSQTIDLAAREDTPALLVMNRVPPRASLTGEMADAIAASGYDTLGARLGNRTVFASAMGRGASVTENAPSSKAAQEVNLLIEELVSRVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZW11</accession>
    <name>A0A0M6ZW11_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Disulfide-bond oxidoreductase YghU</fullName>
            <ecNumber evidence="4">1.8.4.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">yghU_1</name>
        <name evidence="4" type="ORF">LAX5112_01161</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.8.4.-" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66969.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671009.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01161"/>
    <dbReference type="EnsemblBacteria" id="CTQ66969">
        <property type="protein sequence ID" value="CTQ66969"/>
        <property type="gene ID" value="LAX5112_01161"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006749">
        <property type="term" value="P:glutathione metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010987">
        <property type="entry name" value="Glutathione-S-Trfase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036282">
        <property type="entry name" value="Glutathione-S-Trfase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004045">
        <property type="entry name" value="Glutathione_S-Trfase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02798">
        <property type="entry name" value="GST_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47616">
        <property type="entry name" value="SSF47616"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50405">
        <property type="entry name" value="GST_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50404">
        <property type="entry name" value="GST_NTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GST N-terminal" evidence="2">
        <location>
            <begin position="47"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="domain" description="GST C-terminal" evidence="3">
        <location>
            <begin position="115"/>
            <end position="279"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="18"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="18"/>
            <end position="32"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50404"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50405"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ66969.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="291" mass="32205" checksum="5BE2DB944CDF4883" modified="2015-12-09" version="1">MSDTTTYTPPKVWTWEQPSGGQFASINRPVSGSTHEKELPVGKHPLQLYSLATPNGVKVTLMLEELLALGHKGAEYDAWLIKIGDGDQFGSGFVGANPNSKIPALVDHSTPAKTRVFESASILMYLAEKFGEFLPAEGPERTETLNWLFWQMGSAPYLGGGFGHFYAYAPEKFQYPIDRFSMETKRQLDVLDKALAERPFIAGENYSIADMAIWPWYGGLVLGRLYSAAEFLSVHEYKNLVAWAEKIDARPAAIRGRMVNRVFGDESGQLAERHDAADIDAQLEIAKAAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWH3</accession>
    <name>A0A0M6ZWH3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Soluble hydrogenase 42 kDa subunit</fullName>
            <ecNumber evidence="8">1.12.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">LAX5112_00769</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 4 6">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.</text>
    </comment>
    <dbReference type="EC" id="1.12.-.-" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65823.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670693.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00769"/>
    <dbReference type="EnsemblBacteria" id="CTQ65823">
        <property type="protein sequence ID" value="CTQ65823"/>
        <property type="gene ID" value="LAX5112_00769"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000192">
        <property type="entry name" value="Aminotrans_V_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020578">
        <property type="entry name" value="Aminotrans_V_PyrdxlP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024169">
        <property type="entry name" value="SP_NH2Trfase/AEP_transaminase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00266">
        <property type="entry name" value="Aminotran_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000524">
        <property type="entry name" value="SPT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00595">
        <property type="entry name" value="AA_TRANSFER_CLASS_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3 4" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aminotran_5" evidence="7">
        <location>
            <begin position="30"/>
            <end position="288"/>
        </location>
    </feature>
    <feature type="modified residue" description="N6-(pyridoxal phosphate)lysine" evidence="4">
        <location>
            <position position="196"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009236"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR000524-50"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU004075"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU004504"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00266"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ65823.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="396" mass="42214" checksum="2CE82254EA53C969" modified="2015-12-09" version="1">MSFQNPVFIPGPTNMPDALRKACDMPTLDHRSPLFGEILQPALSGVKKILKSELAEVFIFPSTGTGGWETVITNTLSPGDKILAARNGMFSHRWIDLCQRHGLDVVIVDAPWGTGLPADRYEEILAADTHHEIKAVLATHNETATGVKSDIAAVRRALNNAKHPALLYVDGVSSIASMDFRMDEWGVDAAVTGSQKGFMLPAGLAIVGLSPKAQTAVDQAKLPRTFFDIRDMRKSYAVNAYPYTPAVGLLNGLKHSCDMLLSEGLDNVFARHHRIAEGVRAAVHAWGLQLCAGSRDVYSDTVSAIRTPEGFNATGIVTHAAGKYGVAFGVGLGEVAGKVFRIGHLGSLTDVMTLSGLATAEMVMADLGLSIKLGSGVAAAQDYYRTEEAVSSKEAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWQ2</accession>
    <name>A0A0M6ZWQ2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Neu5Ac permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">siaT_6</name>
        <name evidence="5" type="ORF">LAX5112_00804</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65923.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670719.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00804"/>
    <dbReference type="EnsemblBacteria" id="CTQ65923">
        <property type="protein sequence ID" value="CTQ65923"/>
        <property type="gene ID" value="LAX5112_00804"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010656">
        <property type="entry name" value="DctM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004681">
        <property type="entry name" value="TRAP_DctM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33362">
        <property type="entry name" value="PTHR33362"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06808">
        <property type="entry name" value="DctM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006066">
        <property type="entry name" value="HI0050"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00786">
        <property type="entry name" value="dctM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="6"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="58"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="100"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="142"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="178"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="251"/>
            <end position="269"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="281"/>
            <end position="301"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="321"/>
            <end position="354"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="366"/>
            <end position="393"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="405"/>
            <end position="424"/>
        </location>
    </feature>
    <feature type="domain" description="DctM" evidence="4">
        <location>
            <begin position="11"/>
            <end position="427"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF06808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ65923.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="435" mass="46296" checksum="514B99C9CAC052B8" modified="2015-12-09" version="1">MSPFEIGIASVVAIVVLVYLGVYIPIALGLVSFVSIILMRDNFDLAINLLKIAIGDSVMEYTFATVPLFTFMGLIVSKAGLGADIYQVMNSGFRRVKGGIGMATVGANAVFAAVTGSSIASASVFSKVSVPQMLAFNYNPRFAVGVVAGSSVLGMIIPPSAMLIIYSFVAEQSVGDMFLAGVVPGLMLAAAYVVAIYLMGRFTPKYVGGRTSEETEWMSPLEIADKTIPTLLLIVAVLGGIYTGWLTPVEAGAAGSLLGLLIAAFRKKLTLQSLWQALLETGHITASILFLITAASIYSRMLGLAGLPNELGDLLTETQMTFFWVMVIYVLMMIFLGTILDTASIILIVVPLFLPLVEPMGMSLVWFGIVTVVGAEIGLLTPPLGISCFVIKATLNDPRISLKDVFIGAFPFALVMLIVLIALIRWPSLSLAILN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWZ9</accession>
    <name>A0A0M6ZWZ9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Proclavaminate amidinohydrolase</fullName>
            <ecNumber evidence="5">3.5.3.22</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">pah_2</name>
        <name evidence="5" type="ORF">LAX5112_01301</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="3 4">Belongs to the arginase family.</text>
    </comment>
    <dbReference type="EC" id="3.5.3.22" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67269.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01301"/>
    <dbReference type="EnsemblBacteria" id="CTQ67269">
        <property type="protein sequence ID" value="CTQ67269"/>
        <property type="gene ID" value="LAX5112_01301"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033972">
        <property type="term" value="F:proclavaminate amidinohydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006035">
        <property type="entry name" value="Ureohydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023696">
        <property type="entry name" value="Ureohydrolase_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020855">
        <property type="entry name" value="Ureohydrolase_Mn_BS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11358">
        <property type="entry name" value="PTHR11358"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00491">
        <property type="entry name" value="Arginase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00116">
        <property type="entry name" value="ARGINASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52768">
        <property type="entry name" value="SSF52768"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01053">
        <property type="entry name" value="ARGINASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51409">
        <property type="entry name" value="ARGINASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 4 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00742"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003684"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ67269.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="423" mass="46710" checksum="1CF671209A902BA5" modified="2015-12-09" version="1">MGKGLSLLSSLVILPLLVWPALAQVYGHEYEENAAPIRDGEQPVVPLDTQDPSFNAWRTPLPSYEGQKENREPGLVDPQRFFGQGYMQLPTFLHQPLAFTPEDLAAGEVDVAIMGAFTDMGGGARGASRGPNAVRNSSIYLGYGARQPHMHVMVDPLQDMTVVDYGNAPNDMMSTERTIHAVRSFVRQAAEVQHEDGSRVIPFIIGGDHSLMYPDVAALTDVYGKGNVGVVHFDAHYDAGKYGMGHLINHGMPVYRLIEEGLVEGKNFIQVALRGYYPDEKAFEWMRDNGFRYHTMAEIERRGFDAVMEDVIKEANDGPEYIFVSFDIDTLDPAFVPGTGTPEPGGLMPREVFPIVRRLCAESNVVGFELVELAPLMDPTYVSALNANRVIRECLTGIAMRKQGLTEPHYLSPLTVTHGQGEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZX76</accession>
    <name>A0A0M6ZX76_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01130</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66887.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670986.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ66887">
        <property type="protein sequence ID" value="CTQ66887"/>
        <property type="gene ID" value="LAX5112_01130"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ66887.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="116" mass="12700" checksum="D571E26E3F8EDB4A" modified="2015-12-09" version="1">MSAWRPATQEPDALHACIYDYLRNRTPQVYLDGKSESKSLGQTTELMSNGHKLTLDLVVTPVGSGQWSSRPVVEFAVTGHVADRAAGYSVDGRVVIDQKTLAFLAIEATPTRVNIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXL7</accession>
    <name>A0A0M6ZXL7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Type VI secretion system FHA domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01139</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66912.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670993.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01139"/>
    <dbReference type="EnsemblBacteria" id="CTQ66912">
        <property type="protein sequence ID" value="CTQ66912"/>
        <property type="gene ID" value="LAX5112_01139"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00060">
        <property type="entry name" value="FHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000253">
        <property type="entry name" value="FHA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008984">
        <property type="entry name" value="SMAD_FHA_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017735">
        <property type="entry name" value="T6SS_FHA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00498">
        <property type="entry name" value="FHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00240">
        <property type="entry name" value="FHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49879">
        <property type="entry name" value="SSF49879"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03354">
        <property type="entry name" value="VI_FHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50006">
        <property type="entry name" value="FHA_DOMAIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FHA" evidence="2">
        <location>
            <begin position="23"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="119"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="202"/>
            <end position="363"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="394"/>
            <end position="425"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="202"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="227"/>
            <end position="250"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="298"/>
            <end position="341"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="396"/>
            <end position="415"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50006"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ66912.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="644" mass="67716" checksum="1ABFAE2910A624A5" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXY9</accession>
    <name>A0A0M6ZXY9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01229</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67141.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671068.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01229"/>
    <dbReference type="EnsemblBacteria" id="CTQ67141">
        <property type="protein sequence ID" value="CTQ67141"/>
        <property type="gene ID" value="LAX5112_01229"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67141.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="156" mass="16370" checksum="62B3079F628D9E0F" modified="2015-12-09" version="1">MAVQTNYNETMDAARAGQIVNTEHKELISRTVEDAAGFGFGIPVAQGSNDKGATATLTGVSEIVGITVRERSTNPATPDKRGQYESTLLMRKGVIWVVVTDAGGVDAGDLVWINLTNGTFSNADVGSSNGLQLSGCRWETSAANGALAQLRVNLDV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYA3</accession>
    <name>A0A0M6ZYA3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">3-ketoacyl-CoA thiolase</fullName>
            <ecNumber evidence="7">2.3.1.16</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">fadA_2</name>
        <name evidence="7" type="ORF">LAX5112_01177</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the thiolase-like superfamily. Thiolase family.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.16" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67010.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671022.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01177"/>
    <dbReference type="EnsemblBacteria" id="CTQ67010">
        <property type="protein sequence ID" value="CTQ67010"/>
        <property type="gene ID" value="LAX5112_01177"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003988">
        <property type="term" value="F:acetyl-CoA C-acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd00751">
        <property type="entry name" value="thiolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.47.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002155">
        <property type="entry name" value="Thiolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016039">
        <property type="entry name" value="Thiolase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020615">
        <property type="entry name" value="Thiolase_acyl_enz_int_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020610">
        <property type="entry name" value="Thiolase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020617">
        <property type="entry name" value="Thiolase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020613">
        <property type="entry name" value="Thiolase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020616">
        <property type="entry name" value="Thiolase_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02803">
        <property type="entry name" value="Thiolase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00108">
        <property type="entry name" value="Thiolase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000429">
        <property type="entry name" value="Ac-CoA_Ac_transf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53901">
        <property type="entry name" value="SSF53901"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01930">
        <property type="entry name" value="AcCoA-C-Actrans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00098">
        <property type="entry name" value="THIOLASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00737">
        <property type="entry name" value="THIOLASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00099">
        <property type="entry name" value="THIOLASE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4 7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Thiolase_N" evidence="5">
        <location>
            <begin position="5"/>
            <end position="261"/>
        </location>
    </feature>
    <feature type="domain" description="Thiolase_C" evidence="6">
        <location>
            <begin position="270"/>
            <end position="390"/>
        </location>
    </feature>
    <feature type="active site" description="Acyl-thioester intermediate" evidence="3">
        <location>
            <position position="90"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="3">
        <location>
            <position position="348"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="3">
        <location>
            <position position="378"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR000429-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003557"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00108"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF02803"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ67010.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="392" mass="41466" checksum="2893FF91C564A43E" modified="2015-12-09" version="1">MKQAVIVSTARTGLAKSYRGAFNETHGATMAGHAIEHAVARSKVDPAIIEDAFIGCGYPEGWTGSNIARQSVLRAGLPVTTAAVTINRFCSSGLQAVAMAAHAISVEGAPATIAGGVESISQMPPSRPPAAREKWLDEHKPEVYLSMIETSDIVAKRYNISRDAQDELSLVSQQRTAAAQAAGKLDEEIVPITVTQAFKDRETGEVTRKEVTFSMDDCNRPNTTLEGLAKLEPVRGEGNFTTAGNASQLSDGAAALVLMDADLAEKQGLEPLGALKGFVTAGCEPDEMGIGPVYAVPRLLKRHGLSVDDIDLWELNEAFASQALYCREQLGIDPEKCNVNGGSISIGHPFGMTGARMTGHLLLEGRRRGSKLGVVTMCIGGGQGAAGLFEIY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYY4</accession>
    <name>A0A0M6ZYY4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">TRAP-type mannitol/chloroaromatic compound transport system, small permease component</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">LAX5112_01551</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67869.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671347.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01551"/>
    <dbReference type="EnsemblBacteria" id="CTQ67869">
        <property type="protein sequence ID" value="CTQ67869"/>
        <property type="gene ID" value="LAX5112_01551"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007387">
        <property type="entry name" value="TRAP_DctQ"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35011">
        <property type="entry name" value="PTHR35011"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04290">
        <property type="entry name" value="DctQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="6 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="12"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="41"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="185"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="251"/>
            <end position="272"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="329"/>
            <end position="353"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="408"/>
            <end position="426"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="7">
        <location>
            <begin position="96"/>
            <end position="161"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ67869.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="440" mass="49525" checksum="CD1592F711B7B65A" modified="2015-12-09" version="1">MPQLDFTLPHWAYWLGLILFPIIAATLAKRPKPKERKYSTVLGYFILITGGILGLHRLYLKSMIGLLYIPVFIVILFANSQGQDARSVTSDMSNLVRQAERTLDREGGRVTSAEAELPGMRQKLAEAETGSLAERRAQRDVRRAEQRIEQGRERMAAAEADLETGRPAAEEAQANLEFWQNIAKYAFWLILAGVAIDVFLLPGLVRKANANLPPEPELSEAELKLKALEAAERKDDASYVSSGWTGWIDRLSLFCGEFVAYWAVIAVIVYYFEVMSRYVFGSPTNWAHEAMYLMFGMQYLIAGSYAMLTESHVRVDIFYAPLSKRRKAIVDLLTSVFFFIFAGTLLVTSWIFAFDAIAVPSGNSLISDWARGEIGFAEVITSWNLAQWTDPNIRWGEISFNEWEVPLWPMKMVMIIGGLLLVLQGVSKFAQDLRALVGRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZI1</accession>
    <name>A0A0M6ZZI1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="12">Potassium efflux system KefA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">kefA</name>
        <name evidence="12" type="ORF">LAX5112_01645</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the MscS (TC 1.A.23) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68125.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671412.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01645"/>
    <dbReference type="EnsemblBacteria" id="CTQ68125">
        <property type="protein sequence ID" value="CTQ68125"/>
        <property type="gene ID" value="LAX5112_01645"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022249">
        <property type="entry name" value="DUF3772"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010920">
        <property type="entry name" value="LSM_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006685">
        <property type="entry name" value="MscS_channel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011066">
        <property type="entry name" value="MscS_channel_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011014">
        <property type="entry name" value="MscS_channel_TM-2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023408">
        <property type="entry name" value="MscS_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12607">
        <property type="entry name" value="DUF3772"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00924">
        <property type="entry name" value="MS_channel"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50182">
        <property type="entry name" value="SSF50182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82689">
        <property type="entry name" value="SSF82689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82861">
        <property type="entry name" value="SSF82861"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10" id="KW-0732">Signal</keyword>
    <keyword evidence="6" id="KW-0346">Stress response</keyword>
    <keyword evidence="4 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 9" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="10">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809152" evidence="10">
        <location>
            <begin position="27"/>
            <end position="810"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="207"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="246"/>
            <end position="275"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="287"/>
            <end position="307"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="327"/>
            <end position="344"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="356"/>
            <end position="377"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="423"/>
            <end position="442"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="448"/>
            <end position="472"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="484"/>
            <end position="511"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="531"/>
            <end position="555"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="576"/>
            <end position="599"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="605"/>
            <end position="634"/>
        </location>
    </feature>
    <feature type="domain" description="DUF3772" evidence="11">
        <location>
            <begin position="132"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="387"/>
            <end position="410"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008017"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF12607"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ68125.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="810" mass="88200" checksum="637FB2A582B19160" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZM3</accession>
    <name>A0A0M6ZZM3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcriptional regulatory protein ros</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ros</name>
        <name evidence="2" type="ORF">LAX5112_01515</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ros/MucR family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67777.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008190661.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01515"/>
    <dbReference type="EnsemblBacteria" id="CTQ67777">
        <property type="protein sequence ID" value="CTQ67777"/>
        <property type="gene ID" value="LAX5112_01515"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.1550">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041920">
        <property type="entry name" value="ROS/MUCR_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008807">
        <property type="entry name" value="ROS_MUCR"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05443">
        <property type="entry name" value="ROS_MUCR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007031"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67777.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="138" mass="15375" checksum="A3899111DC458DAB" modified="2015-12-09" version="1">MTDNLVEANLIDLTADIVSAYVSNNTVASTELPGLINEVYGALQKTAAASNEPEPEPLKPAVPVKKSVMPDFIICLEDGKKFKSLKRHLRTHYNMTPEEYREKWDLAPDYPMVAPNYAAARSELAKKMGLGQQRKRAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZW9</accession>
    <name>A0A0M6ZZW9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 10">Flagellar biosynthetic protein FliR</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">LAX5112_01664</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 10">Role in flagellar biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="10">Cell membrane</location>
            <topology evidence="10">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="10">Bacterial flagellum basal body</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 10">Belongs to the FliR/MopE/SpaR family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68179.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671428.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01664"/>
    <dbReference type="EnsemblBacteria" id="CTQ68179">
        <property type="protein sequence ID" value="CTQ68179"/>
        <property type="gene ID" value="LAX5112_01664"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009425">
        <property type="term" value="C:bacterial-type flagellum basal body"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044780">
        <property type="term" value="P:bacterial-type flagellum assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006605">
        <property type="term" value="P:protein targeting"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006303">
        <property type="entry name" value="FliR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002010">
        <property type="entry name" value="T3SS_IM_R"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30065">
        <property type="entry name" value="PTHR30065"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01311">
        <property type="entry name" value="Bac_export_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00953">
        <property type="entry name" value="TYPE3IMRPROT"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01400">
        <property type="entry name" value="fliR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 10" id="KW-0975">Bacterial flagellum</keyword>
    <keyword evidence="5 10" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="11" id="KW-0966">Cell projection</keyword>
    <keyword evidence="11" id="KW-0969">Cilium</keyword>
    <keyword evidence="11" id="KW-0282">Flagellum</keyword>
    <keyword evidence="8 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 10" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="43"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="73"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="131"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="179"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="216"/>
            <end position="244"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009772"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00021717"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023143"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU362071"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ68179.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="257" mass="27538" checksum="7B852F69A4F31AFC" modified="2015-12-09" version="1">MTIELDFLPDVAAAFMLMFARLGTMIMLLPALGESSIPTRFRLTIALALTLVLYPVGSQLYPADLVSNPAQLGVLLISEIVIGVAIGLCAKLVTSAVQIAGVIMANQSGLAFALGTDISNEGQQGALYGNFLALVGITLIFTTDTHYLVIAALHDSFTLFPPGSMPPVGDFSENFAETVAMVFSIAVRMSAPFLVVGLVFYFGLGLLNKLMPQMQIFFIAMPVNIAIGFFLLMVLISTLMMFYLEHVQQALGKFIAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZZ7</accession>
    <name>A0A0M6ZZZ7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01222</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67124.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671061.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01222"/>
    <dbReference type="EnsemblBacteria" id="CTQ67124">
        <property type="protein sequence ID" value="CTQ67124"/>
        <property type="gene ID" value="LAX5112_01222"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021808">
        <property type="entry name" value="DUF3383"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11863">
        <property type="entry name" value="DUF3383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67124.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="380" mass="41846" checksum="B6644183C9512778" modified="2015-12-09" version="1">MARIPYSRTVNVTLSRNDAFPSRRGFGVALFLTSKAVAGKLDADNLTKVYGSMEEVAADFASTDDFYKAANQAFAQNPRPLQVKAAFYNSATVTDAATMKTALDAIYDIDGDWYWLGIESALRDTAICDGIVEWTEAKNKQSGLDTNDANHEDPADATNISARHKGTVERTWTFYHDDADEFAAFALAAMLGTFNFDEADSAYTAKYKRLKTVSPINVGSAAVQAITGFTPQLGQSESAGHMANTYIDIGGRDFVVEGSTLTPDVFIDEIHATDWIIARTEEELLAILLNNARVPYTDPGMQQLASAARIVMKQAFRAGLVADDLNPETGEYEPAITYIIPSVFDVPESQRKKRIAPEIQVRFRYAGAVHYTTIRYQMTF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A009</accession>
    <name>A0A0M7A009_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Sarcosine oxidase subunit beta</fullName>
            <ecNumber evidence="2">1.5.3.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">soxB_2</name>
        <name evidence="2" type="ORF">LAX5112_01695</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.5.3.1" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68325.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671469.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01695"/>
    <dbReference type="EnsemblBacteria" id="CTQ68325">
        <property type="protein sequence ID" value="CTQ68325"/>
        <property type="gene ID" value="LAX5112_01695"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008115">
        <property type="term" value="F:sarcosine oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046653">
        <property type="term" value="P:tetrahydrofolate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006076">
        <property type="entry name" value="FAD-dep_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001763">
        <property type="entry name" value="Rhodanese-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006278">
        <property type="entry name" value="SoxB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01266">
        <property type="entry name" value="DAO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01373">
        <property type="entry name" value="soxB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50206">
        <property type="entry name" value="RHODANESE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Rhodanese" evidence="1">
        <location>
            <begin position="35"/>
            <end position="79"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50206"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68325.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="423" mass="46682" checksum="198FE55968B1224D" modified="2015-12-09" version="1">MTRFSAWSVFWNGVTGQKGWGRQWRDPEPKPYYDIVIVGGGLHGLATAYYLAANHGLKNIAVLEKGWLGGGNAGRNTTIVRSNYARPGNREFYEHSLKLWENLSHELNYNVMFSQRSHIALLHSPGAIDAAARNYNTMRLTGTPDAEIWDLPKLKRAVPHLNYSKTARFPIMGAAVQKRAGTARHDAVAWGYARGADARGVDIIQQCEVQGITRDGDSVSTLETSRGPIRAGKVAFAVAGSTSRLWSMAGLGKLPIESHKLQAFVSEPLKPLLDQVVVFGIGGAHFYISQSDKGGMVFGGDLDWYKSYAQRGNLPIVQDVSEAAMSILPCLGRVKLLRHWSGLVDMSMDGTHFICKTPLTNLYLNAGWNYGGFKATPASGWYFADLIANDRPHEQIRNFDLKRFERGLQIDERGAGPDPKLHG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A026</accession>
    <name>A0A0M7A026_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">FlaG protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01686</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68239.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671437.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ68239">
        <property type="protein sequence ID" value="CTQ68239"/>
        <property type="gene ID" value="LAX5112_01686"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.170">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005186">
        <property type="entry name" value="FlaG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035924">
        <property type="entry name" value="FlaG-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03646">
        <property type="entry name" value="FlaG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF160214">
        <property type="entry name" value="SSF160214"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="24"/>
            <end position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68239.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="145" mass="15906" checksum="DA65A9807C277736" modified="2015-12-09" version="1">MDTALVRPPSPTYTAITPVTRAPEKDQPASSTDLPAEDTVRPSADSSGSQRAATNEQNRASDGRADQSALERYTPAVTRQNVFDEDSESLIYVATNTETGDVIRQIPSETLLRLRAYSETVAAYRTQVEEQQRSSSENEAVQRTV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0I5</accession>
    <name>A0A0M7A0I5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Dipeptide transport system permease protein DppC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">dppC_1</name>
        <name evidence="8" type="ORF">LAX5112_01335</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="6">Cell membrane</location>
            <topology evidence="6">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67333.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008192674.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01335"/>
    <dbReference type="EnsemblBacteria" id="CTQ67333">
        <property type="protein sequence ID" value="CTQ67333"/>
        <property type="gene ID" value="LAX5112_01335"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025966">
        <property type="entry name" value="OppC_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12911">
        <property type="entry name" value="OppC_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="56"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="147"/>
            <end position="169"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="190"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="235"/>
            <end position="265"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="305"/>
            <end position="326"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="360"/>
            <end position="381"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="7">
        <location>
            <begin position="186"/>
            <end position="382"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ67333.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="393" mass="43905" checksum="225ACF92D18FD33A" modified="2015-12-09" version="1">MSDDLKNKTPVREVEHYVDPEPFNPAVVEELSPEQEQFYQASQWQIMWWKFKRHKLAVWSGVVLLIFYLCVPFAEIIAPYAPDTRDSYHLYAPPQPVHLFHDGSFVGPFVYGLKSEINMETLQWEYAPDLDKVQPLRFFCSGDDYEFWGLFPATVHLFCPAEGGTAFLLGTDRLGRDQFSGLVYGARLSLTIGLVGVTISIVLGLFFGGIAGYFGGIADTLIQRLIEIMRSLPELPLWMALSAALPVTWSPVWVYFGLTIILGLLDWPGLARAVRSKLLSLREEEYAKAAVMMGAKPKRVITRHLLPGFTSHIIASASLSIPAMILGETALSFLNLGLRRPAISWGVLLNEAQNISVVTVYPWLMAPVIPIIIVVLAFNFLGDGLRDAADPYK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0N9</accession>
    <name>A0A0M7A0N9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Peptide methionine sulfoxide reductase MsrB</fullName>
            <ecNumber evidence="3">1.8.4.12</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">Peptide-methionine (R)-S-oxide reductase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3 5" type="primary">msrB</name>
        <name evidence="5" type="ORF">LAX5112_01524</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 3">
            <text>[thioredoxin]-disulfide + H2O + L-methionyl-[protein] = [thioredoxin]-dithiol + L-methionyl-(R)-S-oxide-[protein]</text>
            <dbReference type="Rhea" id="RHEA:24164"/>
            <dbReference type="Rhea" id="RHEA-COMP:10698"/>
            <dbReference type="Rhea" id="RHEA-COMP:10700"/>
            <dbReference type="Rhea" id="RHEA-COMP:12313"/>
            <dbReference type="Rhea" id="RHEA-COMP:12314"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16044"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:45764"/>
            <dbReference type="ChEBI" id="CHEBI:50058"/>
            <dbReference type="EC" id="1.8.4.12"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="3">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="3">Binds 1 zinc ion per subunit. The zinc ion is important for the structural integrity of the protein.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the MsrB Met sulfoxide reductase family.</text>
    </comment>
    <dbReference type="EC" id="1.8.4.12" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67800.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008193288.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01524"/>
    <dbReference type="EnsemblBacteria" id="CTQ67800">
        <property type="protein sequence ID" value="CTQ67800"/>
        <property type="gene ID" value="LAX5112_01524"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033743">
        <property type="term" value="F:peptide-methionine (R)-S-oxide reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030091">
        <property type="term" value="P:protein repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006979">
        <property type="term" value="P:response to oxidative stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01400">
        <property type="entry name" value="MsrB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028427">
        <property type="entry name" value="Met_Sox_Rdtase_MsrB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002579">
        <property type="entry name" value="Met_Sox_Rdtase_MsrB_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011057">
        <property type="entry name" value="Mss4-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10173">
        <property type="entry name" value="PTHR10173"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01641">
        <property type="entry name" value="SelR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51316">
        <property type="entry name" value="SSF51316"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00357">
        <property type="entry name" value="TIGR00357"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51790">
        <property type="entry name" value="MSRB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2 3 5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="MsrB" evidence="4">
        <location>
            <begin position="13"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="3">
        <location>
            <position position="124"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="52"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="55"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="101"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="104"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001795"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01400"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51790"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ67800.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="136" mass="15428" checksum="11F9D7A42EEC1AA3" modified="2015-12-09" version="1">MSDDTDTKFKKSTAEWMAQLTPEQFYVTRQSGTERPYTGPYWNSFTAGRYDCVCCGAELFHSDTKFDSGCGWPSFFQAAQPEAIREIEDRSHGMIRTEIRCNKCDAHLGHVFPDGPPPTGLRYCLNGHAMSFEPKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1G3</accession>
    <name>A0A0M7A1G3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01437</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67573.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671265.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01437"/>
    <dbReference type="EnsemblBacteria" id="CTQ67573">
        <property type="protein sequence ID" value="CTQ67573"/>
        <property type="gene ID" value="LAX5112_01437"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019285">
        <property type="entry name" value="DUF2336"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014598">
        <property type="entry name" value="UCP035865"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10098">
        <property type="entry name" value="DUF2336"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF035865">
        <property type="entry name" value="UCP035865"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67573.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="386" mass="42169" checksum="5264E3A7402E4DD5" modified="2015-12-09" version="1">MTVHDILHLTDTDQGGLDIEAARTYAERYLAAEEGSLERKTMAAALTVLLDDPSRPVRKTVAKVLAASAHAPGHVIRFLAQDVDEIAVLVLKSSPLLNETELVDLLAEGSPAVQCAIAEREFVPAGVSAAMCEVADEAACMALLKNPGATVLKSSLVRLAERFEQHPDLCEQLLKLGDLPIPVRYELLMGLAQNLENHPVVLERVPEHQRDVFLSDAIDKVVLRLALEAKDDDLPEFVEHLRACGRLNTRLLLRAVCCGRLRFFAAALANLGNMPLPRLCKVLLTVRRAALQAVLRKAGLPIRSHQAFLLAIDITRKAEADFSYDLALEEARSLTEALLSEMQDGAFGADEDINAFLRRFAIDVARLEARSVLKKSAGDLRSVNAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1Y2</accession>
    <name>A0A0M7A1Y2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Chromosomal replication initiation protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01514</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67774.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01514"/>
    <dbReference type="EnsemblBacteria" id="CTQ67774">
        <property type="protein sequence ID" value="CTQ67774"/>
        <property type="gene ID" value="LAX5112_01514"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006270">
        <property type="term" value="P:DNA replication initiation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006275">
        <property type="term" value="P:regulation of DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06571">
        <property type="entry name" value="Bac_DnaA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1750.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013159">
        <property type="entry name" value="DnaA_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010921">
        <property type="entry name" value="Trp_repressor/repl_initiator"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08299">
        <property type="entry name" value="Bac_DnaA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00760">
        <property type="entry name" value="Bac_DnaA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48295">
        <property type="entry name" value="SSF48295"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Bac_DnaA_C" evidence="1">
        <location>
            <begin position="39"/>
            <end position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00760"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67774.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="137" mass="15759" checksum="22D1F46C156A41A5" modified="2015-12-09" version="1">MFNDRGGVIHDTYGPLRAKPLCLLEENRLEAHLHLAEGYVSRAFCIKPMDFFTLNRGPKHVSDARQLMMYLAHVEFGLSLALVGRRYFRDRSTASHACKKIEIMREDPFFDELVSEIEALITLRRDPLFGASFWGAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A245</accession>
    <name>A0A0M7A245_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="10">ATP-dependent Clp protease ATP-binding subunit ClpA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">clpA</name>
        <name evidence="10" type="ORF">LAX5112_01834</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 7">Belongs to the ClpA/ClpB family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68667.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671547.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01834"/>
    <dbReference type="EnsemblBacteria" id="CTQ68667">
        <property type="protein sequence ID" value="CTQ68667"/>
        <property type="gene ID" value="LAX5112_01834"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008233">
        <property type="term" value="F:peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043335">
        <property type="term" value="P:protein unfolding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1780.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003959">
        <property type="entry name" value="ATPase_AAA_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019489">
        <property type="entry name" value="Clp_ATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036628">
        <property type="entry name" value="Clp_N_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004176">
        <property type="entry name" value="Clp_R_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013461">
        <property type="entry name" value="ClpA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001270">
        <property type="entry name" value="ClpA/B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018368">
        <property type="entry name" value="ClpA/B_CS1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028299">
        <property type="entry name" value="ClpA/B_CS2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041546">
        <property type="entry name" value="ClpA/ClpB_AAA_lid"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00004">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07724">
        <property type="entry name" value="AAA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17871">
        <property type="entry name" value="AAA_lid_9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02861">
        <property type="entry name" value="Clp_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10431">
        <property type="entry name" value="ClpB_D2-small"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00300">
        <property type="entry name" value="CLPPROTEASEA"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM01086">
        <property type="entry name" value="ClpB_D2-small"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81923">
        <property type="entry name" value="SSF81923"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02639">
        <property type="entry name" value="ClpA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51903">
        <property type="entry name" value="CLP_R"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00870">
        <property type="entry name" value="CLPAB_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00871">
        <property type="entry name" value="CLPAB_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 7" id="KW-0143">Chaperone</keyword>
    <keyword evidence="10" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3 7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-0645">Protease</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="Clp R" evidence="9">
        <location>
            <begin position="1"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="147"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="756"/>
            <end position="814"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="152"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="8">
        <location>
            <begin position="771"/>
            <end position="787"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008675"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU004432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51903"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ68667.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="814" mass="89751" checksum="DC8A59F98EA17650" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2R4</accession>
    <name>A0A0M7A2R4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Cupin_5 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02079</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69345.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671751.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02079"/>
    <dbReference type="EnsemblBacteria" id="CTQ69345">
        <property type="protein sequence ID" value="CTQ69345"/>
        <property type="gene ID" value="LAX5112_02079"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd06121">
        <property type="entry name" value="cupin_YML079wp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009327">
        <property type="entry name" value="Cupin_DUF985"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039935">
        <property type="entry name" value="YML079W-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33387">
        <property type="entry name" value="PTHR33387"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06172">
        <property type="entry name" value="Cupin_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cupin_5" evidence="1">
        <location>
            <begin position="11"/>
            <end position="138"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF06172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69345.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="147" mass="16009" checksum="7A37C6F5ABE61D24" modified="2015-12-09" version="1">MPVDPTLSADDIVDLLKLQPHPEGGFYAETFRDDVTDAQGRAASTLIYFLLPDGIVSRWHKVDAVETWHWYAGAALELSISLDGNDKQVILLGNDLAGGERPQGIVPREAWQQARSLGAWTLVGCTVAPGFQFEGFEMAPEGWEPGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2T4</accession>
    <name>A0A0M7A2T4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcriptional repressor SdpR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">sdpR</name>
        <name evidence="2" type="ORF">LAX5112_01608</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68024.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671387.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01608"/>
    <dbReference type="EnsemblBacteria" id="CTQ68024">
        <property type="protein sequence ID" value="CTQ68024"/>
        <property type="gene ID" value="LAX5112_01608"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001845">
        <property type="entry name" value="HTH_ArsR_DNA-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00778">
        <property type="entry name" value="HTHARSR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00418">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50987">
        <property type="entry name" value="HTH_ARSR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH arsR-type" evidence="1">
        <location>
            <begin position="1"/>
            <end position="93"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50987"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68024.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="110" mass="12205" checksum="A18BE0914D4B6237" modified="2015-12-09" version="1">MSDMQQLDATFSALSDGTRRAIVARLANGEATLSDLAAPFDMSLTAVSKHMRVLSEAGLVDIEKRGRTKHCRLKGAPIKEAVDWLSKYEAFWLDRFDALALHLANKDTQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A463</accession>
    <name>A0A0M7A463_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01771</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68523.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ68523">
        <property type="protein sequence ID" value="CTQ68523"/>
        <property type="gene ID" value="LAX5112_01771"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ68523.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="159" mass="18128" checksum="21628FFAF215BC4B" modified="2015-12-09" version="1">MFTRLFLIAMFIGLSITPGISETVGSWHSEKVNGYQHYWTKNKLGSRFSIWCPASKKAVLPLISIDIKGRLPVPKTLIRVELDHRLIKFTADRDGYIRPDCPACADNMRYFWQLLRNSARFAVLFDEDRRYAGFSTRGVGEVIPPTVCEPDPGLQANHQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4H8</accession>
    <name>A0A0M7A4H8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Citrate synthase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">citA</name>
        <name evidence="9" type="ORF">LAX5112_02009</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>acetyl-CoA + H2O + oxaloacetate = citrate + CoA + H(+)</text>
            <dbReference type="Rhea" id="RHEA:16845"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16452"/>
            <dbReference type="ChEBI" id="CHEBI:16947"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57288"/>
            <dbReference type="EC" id="2.3.3.16"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Carbohydrate metabolism; tricarboxylic acid cycle; isocitrate from oxaloacetate: step 1/2.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 6 8">Belongs to the citrate synthase family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69170.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671900.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02009"/>
    <dbReference type="EnsemblBacteria" id="CTQ69170">
        <property type="protein sequence ID" value="CTQ69170"/>
        <property type="gene ID" value="LAX5112_02009"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00223">
        <property type="reaction ID" value="UER00717"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0036440">
        <property type="term" value="F:citrate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006099">
        <property type="term" value="P:tricarboxylic acid cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.580.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016142">
        <property type="entry name" value="Citrate_synth-like_lrg_a-sub"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016143">
        <property type="entry name" value="Citrate_synth-like_sm_a-sub"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002020">
        <property type="entry name" value="Citrate_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019810">
        <property type="entry name" value="Citrate_synthase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024176">
        <property type="entry name" value="Citrate_synthase_bac-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036969">
        <property type="entry name" value="Citrate_synthase_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11739">
        <property type="entry name" value="PTHR11739"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00285">
        <property type="entry name" value="Citrate_synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001369">
        <property type="entry name" value="Citrate_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00143">
        <property type="entry name" value="CITRTSNTHASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48256">
        <property type="entry name" value="SSF48256"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00480">
        <property type="entry name" value="CITRATE_SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 6 8" id="KW-0808">Transferase</keyword>
    <keyword evidence="4" id="KW-0816">Tricarboxylic acid cycle</keyword>
    <feature type="active site" evidence="7">
        <location>
            <position position="257"/>
        </location>
    </feature>
    <feature type="active site" evidence="7">
        <location>
            <position position="312"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000308"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004751"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010566"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022532"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRNR" id="PIRNR001369"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR001369-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU003406"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ69170.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="367" mass="39239" checksum="3ECEF69B8A0BF415" modified="2015-12-09" version="1">MTKAPDPGTLTADPASGLEGVVAAHTGLSDVDGQNGQLVLRGKRIEDLAGKVWFEEAVLHLWHSYVFCDADEIKKALGAARSAAYFSVPLIEASSGKLSIYERMQVGLAALPLDPDRPQAITISGALPVFLAAAFRVSEGEHPIAPDPNLTTAEDLLRMMGDEEPDAEHIAALDRYLVTILDHGLNASTFTARVIGSTEADMKQAVLGAMGALSGPLHGGAPGPVLDMIDAIGAPENAADWISEALKRKERLMGFGHRIYRTRDPRADVLKAGLKTLQARNQKVSLAEKIEEAALTALRKAKPDRALDTNVEFYTAVLLDAIGIDRTLFTPLFAVGRTPGWCAHVMEQQATGKLIRPASLYVGPKPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A563</accession>
    <name>A0A0M7A563_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Purine nucleoside receptor A</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">tmpC_3</name>
        <name evidence="4" type="ORF">LAX5112_01914</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the BMP lipoprotein family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68863.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671606.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01914"/>
    <dbReference type="EnsemblBacteria" id="CTQ68863">
        <property type="protein sequence ID" value="CTQ68863"/>
        <property type="gene ID" value="LAX5112_01914"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003760">
        <property type="entry name" value="PnrA-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02608">
        <property type="entry name" value="Bmp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0675">Receptor</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="domain" description="Bmp" evidence="3">
        <location>
            <begin position="30"/>
            <end position="304"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008610"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF02608"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ68863.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="336" mass="35727" checksum="BC8282985DB3B728" modified="2015-12-09" version="1">MQKFTLLRLIAVSIFLVFYGVVPARPETVGAVIFTNAKMDGSFNQLAAIGSERAAVEFGLEIREWISTDPDETMNVIRQFAKSGVNHILTLGFESSELVRTTALEFPDVKFTSIDGVISDLPNVRSILFADDESGFLAGYVAGLKTRTGTVGTIGGMDIPPVRRFMCGFEAGARYANADVSVLSSFVGQDMYAFRNIQGGKAIADKMFADGADVIFAPAGMAAEGVARAAREQDAHVIMVDANKNGFLPGTVLTSALKRVDEAAYATWKAAIDDTWTPGLVVMTTRDKGVGWAVDEHNRDLVSDVEDQVNAIVDGLAAGSVAIVPGDSVAGCADVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A587</accession>
    <name>A0A0M7A587_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">2-oxoglutarate-dependent ethylene/succinate-forming enzyme</fullName>
            <ecNumber evidence="3">1.13.12.19</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">efe</name>
        <name evidence="3" type="ORF">LAX5112_02104</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the iron/ascorbate-dependent oxidoreductase family.</text>
    </comment>
    <dbReference type="EC" id="1.13.12.19" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69410.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02104"/>
    <dbReference type="EnsemblBacteria" id="CTQ69410">
        <property type="protein sequence ID" value="CTQ69410"/>
        <property type="gene ID" value="LAX5112_02104"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102276">
        <property type="term" value="F:2-oxoglutarate oxygenase/decarboxylase (ethylene-forming) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026992">
        <property type="entry name" value="DIOX_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044861">
        <property type="entry name" value="IPNS-like_FE2OG_OXY"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027443">
        <property type="entry name" value="IPNS-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005123">
        <property type="entry name" value="Oxoglu/Fe-dep_dioxygenase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03171">
        <property type="entry name" value="2OG-FeII_Oxy"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14226">
        <property type="entry name" value="DIOX_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51471">
        <property type="entry name" value="FE2OG_OXY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0408">Iron</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="1 3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Fe2OG dioxygenase" evidence="2">
        <location>
            <begin position="170"/>
            <end position="276"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU003682"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ69410.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="321" mass="34755" checksum="F3D7784B282E97B7" modified="2015-12-09" version="1">MDNAHIPIIDLGGLVGGAPGGLEQAAQKIGEAAREAGFFYLKNHGIDADLIAAINAAAHAVFALPDVDKLALTKDFHTTNRGYVPMEGENLDPSKPADLKEAFNVGLELASDDPRILAGEPFRALNQWPHIPGWRDTVLKYFNAVWGLGRTIHRAIALDLKAAPDFFEDKLDAPMATLRLLHYPPQPADAAAGQIGAGTHTDYGNITILLPDEVGGLEVRRRDGEWIQAPTVDGTFICNIGDCLMRWTNDVYVSTPHRVVNGSGRERYSIAFFLDPNPDAEVSCLPGCVSADRAPRYAPVSGAAYLWSRLDATYEQAKKGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5I8</accession>
    <name>A0A0M7A5I8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Ski2-like helicase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02140</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69510.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671796.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02140"/>
    <dbReference type="EnsemblBacteria" id="CTQ69510">
        <property type="protein sequence ID" value="CTQ69510"/>
        <property type="gene ID" value="LAX5112_02140"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004386">
        <property type="term" value="F:helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0347">Helicase</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="1">
        <location>
            <begin position="195"/>
            <end position="368"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase C-terminal" evidence="2">
        <location>
            <begin position="473"/>
            <end position="640"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ69510.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="971" mass="105843" checksum="52D72CB570E09563" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5U1</accession>
    <name>A0A0M7A5U1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Beta-lactamase hydrolase-like protein</fullName>
            <ecNumber evidence="2">3.-.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">blh_1</name>
        <name evidence="2" type="ORF">LAX5112_02533</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.-.-.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70505.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672106.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02533"/>
    <dbReference type="EnsemblBacteria" id="CTQ70505">
        <property type="protein sequence ID" value="CTQ70505"/>
        <property type="gene ID" value="LAX5112_02533"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.15.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041516">
        <property type="entry name" value="LACTB2_WH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001279">
        <property type="entry name" value="Metallo-B-lactamas"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036866">
        <property type="entry name" value="RibonucZ/Hydroxyglut_hydro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17778">
        <property type="entry name" value="BLACT_WH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00753">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00849">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56281">
        <property type="entry name" value="SSF56281"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lactamase_B" evidence="1">
        <location>
            <begin position="36"/>
            <end position="212"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70505.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="300" mass="32551" checksum="2154CFBC3F715EAA" modified="2015-12-09" version="1">MKHDRSFDPRYGERVELLPGLCRVTARNPGPFTFHGTNSYILGQKHLVVVDPGPADEEHVNTLLSLTDGAQIEAILVTHTHVDHSPAARMLQERSGAKIIGCAPHRAARPLMEGEVNPLDASGDKDYAPDQEYQDGDVFEAAAIKFEAIATPGHTANHMCFALPGEDVLISGDHVMAWSTSIVAAPDGSMRDYMASIEKLLARSETTYLPGHGGIVSDAPIYVEQLKQHRLSREATILNELSTQPRSIPEIVAKLYADVDPKLHGAAGLSVFAHLEDLTERGRTTAAPSLALDATFRLKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A666</accession>
    <name>A0A0M7A666_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01992</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69124.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671694.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01992"/>
    <dbReference type="EnsemblBacteria" id="CTQ69124">
        <property type="protein sequence ID" value="CTQ69124"/>
        <property type="gene ID" value="LAX5112_01992"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="24"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="64"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="107"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="131"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="183"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="229"/>
            <end position="253"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="273"/>
            <end position="299"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="273"/>
            <end position="287"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ69124.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="299" mass="32326" checksum="77A07BFADE883705" modified="2015-12-09" version="1">MFITVLERSLSLAQHNIGTLFKTGWAYILVLVALNFAIGSSLMPSGGFSTISYMTEPVETVDEGALRALAALANLLVGFSIAIAYVRKLLIDARDFPLFVGPRTFKVIINMIVLNLIGFLSLIPLGIAASILAAITGGLGAIAFLAAPFIALMVTQKFSLVLPAAAVDDPLTFKESWRATNGLGWPMAFAALVMSLLAAVLVAGVGLILSLMENFLAANVFWQQIRSAAFPMATMLITVWVFANLHATFYGMVRERFAARIGLRAEDLKQVEETRSAADEKTRSKARKALAGAQKMRRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6E1</accession>
    <name>A0A0M7A6E1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Neu5Ac permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">siaT_18</name>
        <name evidence="5" type="ORF">LAX5112_02582</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70705.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040450868.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02582"/>
    <dbReference type="EnsemblBacteria" id="CTQ70705">
        <property type="protein sequence ID" value="CTQ70705"/>
        <property type="gene ID" value="LAX5112_02582"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010656">
        <property type="entry name" value="DctM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004681">
        <property type="entry name" value="TRAP_DctM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33362">
        <property type="entry name" value="PTHR33362"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06808">
        <property type="entry name" value="DctM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006066">
        <property type="entry name" value="HI0050"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00786">
        <property type="entry name" value="dctM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="29"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="99"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="140"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="176"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="221"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="248"/>
            <end position="266"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="278"/>
            <end position="301"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="321"/>
            <end position="354"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="361"/>
            <end position="383"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="403"/>
            <end position="427"/>
        </location>
    </feature>
    <feature type="domain" description="DctM" evidence="4">
        <location>
            <begin position="14"/>
            <end position="422"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF06808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ70705.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="434" mass="46256" checksum="11C0221AE44BFC0A" modified="2015-12-09" version="1">MDFSLLSFLLGLGMLAALATGIWVAVALFAVALATMMLLVSVPAGPVMATTVWGASHHWDLTALPMFIWMGEILFRSRLSEDMFAGLSPWMRNLPGRLLHVNILGCGIFAAVSGSSAATAATVGRMSLPELRSRGYDEKLAIGTLAGSATLGLLIPPSIILIVYGAATEQSIARLFMAGVLPGAMLCLLFMGYVAVWAMLNRDKMPAKEEKLPLWTQIKATRRLFPVIGLIIGVIGSIYAGLASPTEAAAIGVVLALLLSWVSGTLNRKSFADGLLGATRTSCMIAFILAGAAFLTVAMGYTGIPRELASWIGGMDMSPYVLLFALTIFFVVLGCFLDGISVVVLTTSVILPMVEQAGLDLIWFGIFIVLVVEMSQITPPVGFNLFVIQGMTGRNIFSVARMALPFFLLMVVALVLLVAFPGLALWLPQTMLSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6S0</accession>
    <name>A0A0M7A6S0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Chorismate mutase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02075</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69334.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671749.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02075"/>
    <dbReference type="EnsemblBacteria" id="CTQ69334">
        <property type="protein sequence ID" value="CTQ69334"/>
        <property type="gene ID" value="LAX5112_02075"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046417">
        <property type="term" value="P:chorismate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.59.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036263">
        <property type="entry name" value="Chorismate_II_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036979">
        <property type="entry name" value="CM_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48600">
        <property type="entry name" value="SSF48600"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ69334.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="290" mass="30677" checksum="68E11068170C133C" modified="2015-12-09" version="1">MTRSPDNCASIDTARARLAEIDARIYDALVERHQTETDLAALHESADASSQTQDFDHDTDLIRSLAELNQGALPLVALEEIWRAILATSAERPAGSAIHLDGSGDLVGMLDLARYYFSFSAELVPGSDAADVAGAVSDAVFDIGLVALSDRADLPWWRGLNESGAQIRARLPLVLVDERPADLPALVLAKSDRIVDKPEIAVYDARWSDRLPGKLMDQGIEVLSFYRSATGVDALLAVSGDLPEDAVLAACLEAGAAPDVLRAVGGYAAPIDGASDPDDVFDPADAGDLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6V9</accession>
    <name>A0A0M7A6V9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Na(+)/H(+) antiporter regulatory protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">nhaR</name>
        <name evidence="3" type="ORF">LAX5112_02384</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70156.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672001.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02384"/>
    <dbReference type="EnsemblBacteria" id="CTQ70156">
        <property type="protein sequence ID" value="CTQ70156"/>
        <property type="gene ID" value="LAX5112_02384"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00039">
        <property type="entry name" value="HTHLYSR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="4"/>
            <end position="61"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ70156.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="290" mass="31895" checksum="77D49F139601DBD4" modified="2015-12-09" version="1">MDNLNYHHLRYFREVAHEGNLTRTAERVNLSQSALSTQIRQLEARLGHDLFERSGRQLVLTEVGRIVLDHADRIFGTGEELIATLQRSSQSTPPLRVGAQSTLSRNFQIRFLKPLLSSGEVDFTLRSGSASVLLEALESLALDIVLTTDPPDSSLSGDFTAHRLAEQKVTIHGTPERIAGKTLHQLLSDEPLIVPNESSIRTGFDSLVARLGITPRIVADVDDMAMVRLLARADVGIAIAPPVVMADEIASGLLESAPFDLQIFEAFYAVTVTRSFPHPILRELLTGQMD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7L7</accession>
    <name>A0A0M7A7L7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02224</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69723.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02224"/>
    <dbReference type="EnsemblBacteria" id="CTQ69723">
        <property type="protein sequence ID" value="CTQ69723"/>
        <property type="gene ID" value="LAX5112_02224"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021252">
        <property type="entry name" value="DUF2794"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10984">
        <property type="entry name" value="DUF2794"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="7"/>
            <end position="27"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69723.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="129" mass="14564" checksum="679D7B7E3C8FDE00" modified="2015-12-09" version="1">MSEADDSASQHSRSLSLNGSGQKAPPSLPVVSFNRRELDIILRLYGRMVADGEWRDYAIDILNDRAVFSIFRRASEMPLYRIEKDPKLARRQGAYSVVATGGMILKRGHDLAQVLRVLEKKKHLRVVDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7Y1</accession>
    <name>A0A0M7A7Y1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Endolytic peptidoglycan transglycosylase RlpA</fullName>
            <ecNumber evidence="3">4.2.2.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">rlpA</name>
        <name evidence="6" type="ORF">LAX5112_02761</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 4">Belongs to the RlpA family.</text>
    </comment>
    <dbReference type="EC" id="4.2.2.-" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71265.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672319.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02761"/>
    <dbReference type="EnsemblBacteria" id="CTQ71265">
        <property type="protein sequence ID" value="CTQ71265"/>
        <property type="gene ID" value="LAX5112_02761"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008932">
        <property type="term" value="F:lytic endotransglycosylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000270">
        <property type="term" value="P:peptidoglycan metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02071">
        <property type="entry name" value="RlpA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034718">
        <property type="entry name" value="RlpA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009009">
        <property type="entry name" value="RlpA-like_DPBB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036908">
        <property type="entry name" value="RlpA-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012997">
        <property type="entry name" value="RplA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03330">
        <property type="entry name" value="DPBB_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50685">
        <property type="entry name" value="SSF50685"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00413">
        <property type="entry name" value="rlpA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="1 3" id="KW-0456">Lyase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5009984373" description="Endolytic peptidoglycan transglycosylase RlpA" evidence="3">
        <location>
            <begin position="26"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="domain" description="DPBB_1" evidence="5">
        <location>
            <begin position="36"/>
            <end position="122"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02071"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003495"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF03330"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ71265.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="138" mass="14689" checksum="E72037EA17D1A67A" modified="2015-12-09" version="1" precursor="true">MTQPTFLKAWSSVFATLVFSSVVWAAPAKAEESFVQCGKASWYNLRGTTASGEQADPNKLAAAHPSLPFGTLATVTNLRNGKSVVVRINDRGPFVKRRIIDVTQAAAQKLGFVQQGIAKVKVTSAAPLAGKNTPDNCQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7Z5</accession>
    <name>A0A0M7A7Z5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Beta-methylmalyl-CoA dehydratase</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="1">2-methylfumaryl-CoA hydratase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="1">Mesaconyl-CoA hydratase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02279</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>(2R,3S)-beta-methylmalyl-CoA = 2-methylfumaryl-CoA + H2O</text>
            <dbReference type="Rhea" id="RHEA:38263"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:75634"/>
            <dbReference type="ChEBI" id="CHEBI:75635"/>
            <dbReference type="EC" id="4.2.1.148"/>
        </reaction>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69853.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671891.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02279"/>
    <dbReference type="EnsemblBacteria" id="CTQ69853">
        <property type="protein sequence ID" value="CTQ69853"/>
        <property type="gene ID" value="LAX5112_02279"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016833">
        <property type="term" value="F:oxo-acid-lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029069">
        <property type="entry name" value="HotDog_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002539">
        <property type="entry name" value="MaoC-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016790">
        <property type="entry name" value="Thiol_ester_hydratase_Rv0216"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01575">
        <property type="entry name" value="MaoC_dehydratas"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF021494">
        <property type="entry name" value="Rv0216_prd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54637">
        <property type="entry name" value="SSF54637"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0456">Lyase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MaoC-like" evidence="2">
        <location>
            <begin position="14"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="domain" description="MaoC-like" evidence="2">
        <location>
            <begin position="201"/>
            <end position="309"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRNR" id="PIRNR021494"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01575"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ69853.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="350" mass="38190" checksum="DBBA22FD653AD0A5" modified="2015-12-09" version="1">MSKTNAGNFFEDFQIGQVIKHATPRTITSGDQALYTALYGSRFAVQSSDAFARALGYAHAPVDDLLTFHVVFGKTVPDISLNAVANLGYSGGRFLAPVYPGDTLSTVSEVIGKKENSNGKTGVVYVRSTGYSDDGTEVLDYVRWVMVKKRDVASPHADAVVPDLPAAIDPQALGNAVPLLDTVHWENDLCGSPFRWADYETGEKIDHVDGMTVEEAEHQMATRLYQNTAKVHFNLHTESESRFGKRLIYGGHVISLARALSFNGLSNAFHVAGINGGRHVAPLFAGDTVYAWSEVLEKAEIDGRSDVAALRLRLVATKNRACADFPLKDADGKYEDGVILDFDYWALMPK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A846</accession>
    <name>A0A0M7A846_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Bacteriophytochrome cph2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">cph2_14</name>
        <name evidence="3" type="ORF">LAX5112_02762</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71268.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02762"/>
    <dbReference type="EnsemblBacteria" id="CTQ71268">
        <property type="protein sequence ID" value="CTQ71268"/>
        <property type="gene ID" value="LAX5112_02762"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd01948">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01949">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.450">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001633">
        <property type="entry name" value="EAL_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035919">
        <property type="entry name" value="EAL_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000160">
        <property type="entry name" value="GGDEF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00563">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00990">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00052">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00267">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141868">
        <property type="entry name" value="SSF141868"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00254">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50883">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50887">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GGDEF" evidence="2">
        <location>
            <begin position="307"/>
            <end position="444"/>
        </location>
    </feature>
    <feature type="domain" description="EAL" evidence="1">
        <location>
            <begin position="454"/>
            <end position="697"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ71268.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="697" mass="75484" checksum="C1A88004480ADD65" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A864</accession>
    <name>A0A0M7A864_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02559</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70642.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672158.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02559"/>
    <dbReference type="EnsemblBacteria" id="CTQ70642">
        <property type="protein sequence ID" value="CTQ70642"/>
        <property type="gene ID" value="LAX5112_02559"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="33"/>
            <end position="55"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70642.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="173" mass="19039" checksum="5DFA2CFD8880ECF4" modified="2015-12-09" version="1">MFVELIATIVAGIAAAGLVMLINRSLGGRMPKWLAPVMAGVAMLATTISSEYGWYERTRETLPEGLIVAQTVENRSFYRPWTFALPYVERFVAIDTLSIKTHDAQPGMKLADAYYFGRWSTVNKLPVLTDCTETRRAALIDAVTFEDSGTIDGIQWVQVPESDPMVSTICGVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A889</accession>
    <name>A0A0M7A889_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha</fullName>
            <shortName evidence="10">ACCase subunit alpha</shortName>
            <shortName evidence="10">Acetyl-CoA carboxylase carboxyltransferase subunit alpha</shortName>
            <ecNumber evidence="10">2.1.3.15</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10 12" type="primary">accA</name>
        <name evidence="12" type="ORF">LAX5112_02276</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 10">
            <text>acetyl-CoA + N(6)-carboxybiotinyl-L-lysyl-[protein] = malonyl-CoA + N(6)-biotinyl-L-lysyl-[protein]</text>
            <dbReference type="Rhea" id="RHEA:54728"/>
            <dbReference type="Rhea" id="RHEA-COMP:10505"/>
            <dbReference type="Rhea" id="RHEA-COMP:10506"/>
            <dbReference type="ChEBI" id="CHEBI:57288"/>
            <dbReference type="ChEBI" id="CHEBI:57384"/>
            <dbReference type="ChEBI" id="CHEBI:83144"/>
            <dbReference type="ChEBI" id="CHEBI:83145"/>
            <dbReference type="EC" id="2.1.3.15"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 10">Lipid metabolism; malonyl-CoA biosynthesis; malonyl-CoA from acetyl-CoA: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="10">Acetyl-CoA carboxylase is a heterohexamer composed of biotin carboxyl carrier protein (AccB), biotin carboxylase (AccC) and two subunits each of ACCase subunit alpha (AccA) and ACCase subunit beta (AccD).</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="10">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="10">Belongs to the AccA family.</text>
    </comment>
    <dbReference type="EC" id="2.1.3.15" evidence="10"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69844.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02276"/>
    <dbReference type="EnsemblBacteria" id="CTQ69844">
        <property type="protein sequence ID" value="CTQ69844"/>
        <property type="gene ID" value="LAX5112_02276"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00655">
        <property type="reaction ID" value="UER00711"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009317">
        <property type="term" value="C:acetyl-CoA carboxylase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003989">
        <property type="term" value="F:acetyl-CoA carboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016743">
        <property type="term" value="F:carboxyl- or carbamoyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006633">
        <property type="term" value="P:fatty acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:2001295">
        <property type="term" value="P:malonyl-CoA biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00823">
        <property type="entry name" value="AcetylCoA_CT_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001095">
        <property type="entry name" value="Acetyl_CoA_COase_a_su"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029045">
        <property type="entry name" value="ClpP/crotonase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011763">
        <property type="entry name" value="COA_CT_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42853">
        <property type="entry name" value="PTHR42853"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03255">
        <property type="entry name" value="ACCA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01069">
        <property type="entry name" value="ACCCTRFRASEA"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52096">
        <property type="entry name" value="SSF52096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00513">
        <property type="entry name" value="accA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50989">
        <property type="entry name" value="COA_CT_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="10" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="9 10" id="KW-0275">Fatty acid biosynthesis</keyword>
    <keyword evidence="6 10" id="KW-0276">Fatty acid metabolism</keyword>
    <keyword evidence="12" id="KW-0436">Ligase</keyword>
    <keyword evidence="3 10" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="8 10" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="5 10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 10 12" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="CoA carboxyltransferase C-terminal" evidence="11">
        <location>
            <begin position="62"/>
            <end position="323"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004956"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022832"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023160"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00823"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ69844.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="348" mass="37606" checksum="18B9DDC1F9ED4B4A" modified="2015-12-09" version="1">MPMGHLCSRFLIFGSAESCGSDMFQVSEYMHSYLEFEKPVADIEGKIQELRALAAEDGEAVHVESEIDRLKTKSAQTLKDIYAKLTPWQKTLVARHPDRPHAIEYITGLIEDFTPLAGDRNFAEDHALVAGIGRFRGQSVAVLGQEKGHDTETRLKHNFGMVRPEGYRKAVRVMEMAERFGLPLISFVDTSGAYPGRGAEERGQSEAIARSTDAGLGLGTPSVAVVIGEGGSGGAIAVATANKVLMMEHAIYSVISPEGAASILWRDSAKAQDAATALKITAQDLKQLGVIDSIVDEPVGGAHRAREIVIDTAGSAIEEELKHLAGLSADQLRKQRREKFIAIGRTLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8Q5</accession>
    <name>A0A0M7A8Q5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">Riboflavin biosynthesis protein</fullName>
        </recommendedName>
        <domain>
            <recommendedName>
                <fullName evidence="12">Riboflavin kinase</fullName>
                <ecNumber evidence="12">2.7.1.26</ecNumber>
            </recommendedName>
            <alternativeName>
                <fullName evidence="12">Flavokinase</fullName>
            </alternativeName>
        </domain>
        <domain>
            <recommendedName>
                <fullName evidence="12">FMN adenylyltransferase</fullName>
                <ecNumber evidence="12">2.7.7.2</ecNumber>
            </recommendedName>
            <alternativeName>
                <fullName evidence="12">FAD pyrophosphorylase</fullName>
            </alternativeName>
            <alternativeName>
                <fullName evidence="12">FAD synthase</fullName>
            </alternativeName>
        </domain>
    </protein>
    <gene>
        <name evidence="14" type="primary">ribF</name>
        <name evidence="14" type="ORF">LAX5112_02321</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Catalyzes the phosphorylation of riboflavin to FMN followed by the adenylation of FMN to FAD.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2 12">
            <text>ATP + FMN + H(+) = diphosphate + FAD</text>
            <dbReference type="Rhea" id="RHEA:17237"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
            <dbReference type="EC" id="2.7.7.2"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 12">
            <text>ATP + riboflavin = ADP + FMN + H(+)</text>
            <dbReference type="Rhea" id="RHEA:14357"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:57986"/>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.1.26"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="4 12">Cofactor biosynthesis; FAD biosynthesis; FAD from FMN: step 1/1.</text>
    </comment>
    <comment type="pathway">
        <text evidence="5 12">Cofactor biosynthesis; FMN biosynthesis; FMN from riboflavin (ATP route): step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="12">Belongs to the ribF family.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.26" evidence="12"/>
    <dbReference type="EC" id="2.7.7.2" evidence="12"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70014.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671951.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02321"/>
    <dbReference type="EnsemblBacteria" id="CTQ70014">
        <property type="protein sequence ID" value="CTQ70014"/>
        <property type="gene ID" value="LAX5112_02321"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00276">
        <property type="reaction ID" value="UER00406"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00277">
        <property type="reaction ID" value="UER00407"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003919">
        <property type="term" value="F:FMN adenylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008531">
        <property type="term" value="F:riboflavin kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006747">
        <property type="term" value="P:FAD biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009398">
        <property type="term" value="P:FMN biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009231">
        <property type="term" value="P:riboflavin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd02064">
        <property type="entry name" value="FAD_synthetase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.30.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015864">
        <property type="entry name" value="FAD_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023468">
        <property type="entry name" value="Riboflavin_kinase"/>
    </dbReference>
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        <property type="entry name" value="Riboflavin_kinase_bac"/>
    </dbReference>
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        <property type="entry name" value="Riboflavin_kinase_bac/euk"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023465">
        <property type="entry name" value="Riboflavin_kinase_dom_sf"/>
    </dbReference>
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        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22749">
        <property type="entry name" value="PTHR22749"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06574">
        <property type="entry name" value="FAD_syn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01687">
        <property type="entry name" value="Flavokinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004491">
        <property type="entry name" value="FAD_Synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00904">
        <property type="entry name" value="Flavokinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82114">
        <property type="entry name" value="SSF82114"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00083">
        <property type="entry name" value="ribF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11 12" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="10 12" id="KW-0274">FAD</keyword>
    <keyword evidence="6 12" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="7 12" id="KW-0288">FMN</keyword>
    <keyword evidence="12" id="KW-0418">Kinase</keyword>
    <keyword evidence="9 12" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 12" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Flavokinase" evidence="13">
        <location>
            <begin position="192"/>
            <end position="315"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000372"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001332"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00002121"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00004726"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00005201"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRNR" id="PIRNR004491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="SMART" id="SM00904"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="CTQ70014.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="332" mass="36422" checksum="7108CC4504927518" modified="2015-12-09" version="1">MNRTPSSEFQIAESLESFPASLKGGVVAIGNFDGVHRGHRAVLDAALGLGRGTHHPVFAMSFEPHPRTVFNPAKPVFRLTPPPLKTEMLRVCGLDGALILPFTKDFAAVDANAFVQDILIDTLGISHAVTGYDFHFGRARQGTPDYLRAAGAQHGFGVTIVQREEDENADVISSSRIRDNLATGDMAEANALLGYRWFFESQVQHGDKRGRDLGYPTANLRMPEDCPLLQGIYAVKIKVGENWYGGVASYGRRPTFDNGAALFEVYLFDFKGDLYGKTLRVHVVSYLRGEAKFDNAEALISQMDQDSEEARAALASLQPLSEIDLKLLDFAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABA5</accession>
    <name>A0A0M7ABA5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02975</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71927.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008196829.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02975"/>
    <dbReference type="EnsemblBacteria" id="CTQ71927">
        <property type="protein sequence ID" value="CTQ71927"/>
        <property type="gene ID" value="LAX5112_02975"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="40"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="85"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="127"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="152"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="183"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="211"/>
            <end position="231"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71927.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="259" mass="28938" checksum="7474576EA890A697" modified="2015-12-09" version="1">MTEHDLFVVLIAIHITTGAPGLIGFWIPVLAQKGGERHKWWGKIFSVLMLITGTVAMMMATLTLLYPMPTHPHLVDHPEFSDPVLVQGIFGWMMFYLGLLTVNLTWYGWRCAVNKRDQRKNQTALNWGLQAALLAASANCALQGVLISQPMMIGISMVGFATVATNVWFLMKTDPSPIEWLLEHIKAIVGTGISVYTAFFAFGAVRLMPELALAPGLWAIPLVTGLALIFYHRHKVTQRFTQRTARPHQRRSMDLDAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABS0</accession>
    <name>A0A0M7ABS0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="20">Cbb3-type cytochrome c oxidase subunit</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="25" type="primary">fixP</name>
        <name evidence="25" type="ORF">LAX5112_03050</name>
    </gene>
    <organism evidence="25 26">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="26" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="26">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="19">C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. FixP subunit is required for transferring electrons from donor cytochrome c via its heme groups to FixO subunit. From there, electrons are shuttled to the catalytic binuclear center of FixN subunit where oxygen reduction takes place. The complex also functions as a proton pump.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="20 22">
            <name>heme c</name>
            <dbReference type="ChEBI" id="CHEBI:61717"/>
        </cofactor>
        <text evidence="20 22">Binds 2 heme C groups per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="3 20">Energy metabolism; oxidative phosphorylation.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Component of the cbb3-type cytochrome c oxidase at least composed of FixN, FixO, FixQ and FixP.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Single-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 20">Belongs to the CcoP / FixP family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72097.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008194386.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03050"/>
    <dbReference type="EnsemblBacteria" id="CTQ72097">
        <property type="protein sequence ID" value="CTQ72097"/>
        <property type="gene ID" value="LAX5112_03050"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00705"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070469">
        <property type="term" value="C:respirasome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006811">
        <property type="term" value="P:ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006119">
        <property type="term" value="P:oxidative phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.760.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.280.130">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032858">
        <property type="entry name" value="CcoP_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038414">
        <property type="entry name" value="CcoP_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009056">
        <property type="entry name" value="Cyt_c-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036909">
        <property type="entry name" value="Cyt_c-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008168">
        <property type="entry name" value="Cyt_C_IC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004678">
        <property type="entry name" value="Cyt_c_oxidase_cbb3_su3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13442">
        <property type="entry name" value="Cytochrome_CBB3"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14715">
        <property type="entry name" value="FixP_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000006">
        <property type="entry name" value="Cbb3-Cox_fixP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00605">
        <property type="entry name" value="CYTCHROMECIC"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46626">
        <property type="entry name" value="SSF46626"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00782">
        <property type="entry name" value="ccoP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51007">
        <property type="entry name" value="CYTC"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 20" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="6 20" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="20" id="KW-0249">Electron transport</keyword>
    <keyword evidence="8 20 22" id="KW-0349">Heme</keyword>
    <keyword evidence="13 20" id="KW-0375">Hydrogen ion transport</keyword>
    <keyword evidence="17 20" id="KW-0406">Ion transport</keyword>
    <keyword evidence="16 20 21" id="KW-0408">Iron</keyword>
    <keyword evidence="18 20 23" id="KW-0472">Membrane</keyword>
    <keyword evidence="11 20 21" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="15 20" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="26" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="12" id="KW-0677">Repeat</keyword>
    <keyword evidence="9 20" id="KW-0679">Respiratory chain</keyword>
    <keyword evidence="10 23" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="14 23" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="20" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="23">
        <location>
            <begin position="35"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="domain" description="Cytochrome c" evidence="24">
        <location>
            <begin position="111"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="domain" description="Cytochrome c" evidence="24">
        <location>
            <begin position="208"/>
            <end position="289"/>
        </location>
    </feature>
    <feature type="binding site" description="covalent" evidence="22">
        <location>
            <position position="124"/>
        </location>
        <ligand>
            <name>heme c</name>
            <dbReference type="ChEBI" id="CHEBI:61717"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" description="covalent" evidence="22">
        <location>
            <position position="127"/>
        </location>
        <ligand>
            <name>heme c</name>
            <dbReference type="ChEBI" id="CHEBI:61717"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="21">
        <location>
            <position position="128"/>
        </location>
        <ligand>
            <name>heme c</name>
            <dbReference type="ChEBI" id="CHEBI:61717"/>
            <label>1</label>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="21">
        <location>
            <position position="175"/>
        </location>
        <ligand>
            <name>heme c</name>
            <dbReference type="ChEBI" id="CHEBI:61717"/>
            <label>2</label>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <feature type="binding site" description="covalent" evidence="22">
        <location>
            <position position="221"/>
        </location>
        <ligand>
            <name>heme c</name>
            <dbReference type="ChEBI" id="CHEBI:61717"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" description="covalent" evidence="22">
        <location>
            <position position="224"/>
        </location>
        <ligand>
            <name>heme c</name>
            <dbReference type="ChEBI" id="CHEBI:61717"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="21">
        <location>
            <position position="225"/>
        </location>
        <ligand>
            <name>heme c</name>
            <dbReference type="ChEBI" id="CHEBI:61717"/>
            <label>2</label>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="21">
        <location>
            <position position="266"/>
        </location>
        <ligand>
            <name>heme c</name>
            <dbReference type="ChEBI" id="CHEBI:61717"/>
            <label>1</label>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004377"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004673"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00006113"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00011203"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022519"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022660"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00022781"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="ARBA" id="ARBA00025525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="20">
        <source>
            <dbReference type="PIRNR" id="PIRNR000006"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="21">
        <source>
            <dbReference type="PIRSR" id="PIRSR000006-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="22">
        <source>
            <dbReference type="PIRSR" id="PIRSR000006-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="23">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="24">
        <source>
            <dbReference type="PROSITE" id="PS51007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="25">
        <source>
            <dbReference type="EMBL" id="CTQ72097.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="26">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="292" mass="31717" checksum="E117BF9951267723" modified="2015-12-09" version="1">MSDTHQKEVDQVSGVETTGHEWDGLKELNNPLPKWWLYLFYITIVWAVIYWVLYPSWPLISSYTTGVLGSSQRAEALAAVEEGVAGRSQFADQIVATPLADISNDQQLLQFAMANGRAAFGDNCAPCHGAGGTGFEGYPNLQDDTWIWGGTLDDIHTTLLHGIRVDNDNARFGEMPAYGRDELLSKEEISQVANYVASRTGLETDEGVDLAAGETLYVDNCAACHGDNLEGIQDVGAPSLVSANYLYGKSLDAIKAQITNPRNGVMPAWEDRLDPATIKSLTVYVHAFGGGQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AC29</accession>
    <name>A0A0M7AC29_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Glycine betaine/carnitine transport permease protein GbuB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">gbuB</name>
        <name evidence="7" type="ORF">LAX5112_03270</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72685.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451003.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03270"/>
    <dbReference type="EnsemblBacteria" id="CTQ72685">
        <property type="protein sequence ID" value="CTQ72685"/>
        <property type="gene ID" value="LAX5112_03270"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="54"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="80"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="103"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="147"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="226"/>
            <end position="245"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="257"/>
            <end position="275"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="100"/>
            <end position="279"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ72685.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="295" mass="32281" checksum="230D67FD28862B07" modified="2015-12-09" version="1">MEWLQEFPAMSRDNLRVMRQTIDGAFKDFTRAYGDAIESAFDPIKDFLIFLEHLLINSPWPIILAVLVGIVYLMSRNTKITIGSLVALCVIGYLGMWEDTMRTIAMVTVCTMMAIVLGIPLGILMARSDRIQSIINPVLDLMQTMPSFVYLIPVVMIFGLGKVPGMIAVVIYAIPPMIRLTNLGIRLVDTDVLEAADAFGSSSWQKLTNVQLPLALPTIMAGVNQTIMMALAMVVVAALIGVKGLGQPVLNAIANQYLTMGVMNGLAIVAIAIIFDRATQAYGKRLQKHSEVIHG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACM7</accession>
    <name>A0A0M7ACM7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Minor outer membrane protein Omp16</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_03080</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72166.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03080"/>
    <dbReference type="EnsemblBacteria" id="CTQ72166">
        <property type="protein sequence ID" value="CTQ72166"/>
        <property type="gene ID" value="LAX5112_03080"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07185">
        <property type="entry name" value="OmpA_C-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006664">
        <property type="entry name" value="OMP_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006665">
        <property type="entry name" value="OmpA-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036737">
        <property type="entry name" value="OmpA-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00691">
        <property type="entry name" value="OmpA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01021">
        <property type="entry name" value="OMPADOMAIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103088">
        <property type="entry name" value="SSF103088"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51123">
        <property type="entry name" value="OMPA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="OmpA-like" evidence="3">
        <location>
            <begin position="65"/>
            <end position="182"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00473"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ72166.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="190" mass="20621" checksum="652E82D344997F9A" modified="2015-12-09" version="1">MNPVINEKQLGAFLTIRFGRTTGGICLAVVFGLGLASCNTASNLASPNVTNAPAAGFAEIRPGSEEEFIINVGRRIYFDRGSATVSDEAKMTLDNQAKWLKQNKSWLVKVQGHADDPGSEAAQKTLSTQRATAVYNALIERGVNAKRMWVKGYGVERPVTDCDAVTCQSQNRRVVVNLREEFDASAPQSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACT4</accession>
    <name>A0A0M7ACT4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Glutamate synthase [NADPH] small chain</fullName>
            <ecNumber evidence="7">1.4.1.13</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">gltB_1</name>
        <name evidence="7" type="ORF">LAX5112_03117</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="4">Amino-acid biosynthesis.</text>
    </comment>
    <dbReference type="EC" id="1.4.1.13" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72262.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672694.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03117"/>
    <dbReference type="EnsemblBacteria" id="CTQ72262">
        <property type="protein sequence ID" value="CTQ72262"/>
        <property type="gene ID" value="LAX5112_03117"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00060"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004355">
        <property type="term" value="F:glutamate synthase (NADPH) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006537">
        <property type="term" value="P:glutamate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1060.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028261">
        <property type="entry name" value="DPD_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023753">
        <property type="entry name" value="FAD/NAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006005">
        <property type="entry name" value="Glut_synth_ssu1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009051">
        <property type="entry name" value="Helical_ferredxn"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14691">
        <property type="entry name" value="Fer4_20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07992">
        <property type="entry name" value="Pyr_redox_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01317">
        <property type="entry name" value="GOGAT_sm_gam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="3" id="KW-0314">Glutamate biosynthesis</keyword>
    <keyword evidence="2 7" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Fer4_20" evidence="6">
        <location>
            <begin position="23"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="domain" description="Pyr_redox_2" evidence="5">
        <location>
            <begin position="147"/>
            <end position="458"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023164"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00029440"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF07992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF14691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ72262.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="477" mass="52194" checksum="AAA30AC20DC581BB" modified="2015-12-09" version="1">MGKVTGFLEIDRQEQKYQPASDRIRHFREFTIPLNDQEVANQAARCMDCGIPFCHGPSGCPVNNQIPDWNDLVFQGDWDIALRNLHTTNNFPEFTGRICPAPCEEACTLNLEDIPVNIKSIEQAIADKGWEEGWIAPEPSATKTGKAVAIIGSGPAGMAAAQQLARAGHTVHVYERAAKAGGLLRYGIPDFKMEKHFIDRRVKQMEGEGVTFHYNVDVGVTVSMDELTERHDAVILCAGAERPRDPGVEGMDLQGCHWAMDYLVQQNRRVGGEPEGDEAPIWAGGKHVVVIGGGDTASDCVGTAFRQGALSVTQLDIRPIPPLKEDKLTIWPYWPTKFRTSSSQAEGAEREFSAATLGLVADEDGVVTGVKCARVDEKRKPIEGTEFILRADLVFAAIGFSGPRLDTYIAQAGEKLELDGRTNVKANTDDYKTSIDKVFAAGDVRKGQSLVVWAIREGRQAARAVDEYLTGSSDLPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADM0</accession>
    <name>A0A0M7ADM0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">2-vinyl bacteriochlorophyllide hydratase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02944</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71833.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672459.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02944"/>
    <dbReference type="EnsemblBacteria" id="CTQ71833">
        <property type="protein sequence ID" value="CTQ71833"/>
        <property type="gene ID" value="LAX5112_02944"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016836">
        <property type="term" value="F:hydro-lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030494">
        <property type="term" value="P:bacteriochlorophyll biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019685">
        <property type="term" value="P:photosynthesis, dark reaction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009905">
        <property type="entry name" value="BCHF"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07284">
        <property type="entry name" value="BCHF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02020">
        <property type="entry name" value="BchF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="35"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="68"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="105"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="132"/>
            <end position="150"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71833.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="185" mass="20394" checksum="F41F1B9EA802F1C4" modified="2015-12-09" version="1">MSVSGNRNSIKPGFLYTDEERRRRDETVWTLVQGVLAPVQFVVFLISLALIVVFLISGEMQGAAELSVVIKTLTLYAIMITGSIWEKEVFGCYLFARPFFWEDVFSMLVLALHTAYLAALFTEALTANQLMALALAAYATYVLNAGQFVWKLRLARLDQTARKTGVESGVRSAGVSDLQIAGGSQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADS2</accession>
    <name>A0A0M7ADS2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Long-chain-fatty-acid--CoA ligase</fullName>
            <ecNumber evidence="4">6.2.1.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_03157</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="6.2.1.3" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72370.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672617.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03157"/>
    <dbReference type="EnsemblBacteria" id="CTQ72370">
        <property type="protein sequence ID" value="CTQ72370"/>
        <property type="gene ID" value="LAX5112_03157"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004467">
        <property type="term" value="F:long-chain fatty acid-CoA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12780">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025110">
        <property type="entry name" value="AMP-bd_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045851">
        <property type="entry name" value="AMP-bd_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020845">
        <property type="entry name" value="AMP-binding_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000873">
        <property type="entry name" value="AMP-dep_Synth/Lig"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042099">
        <property type="entry name" value="ANL_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00501">
        <property type="entry name" value="AMP-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13193">
        <property type="entry name" value="AMP-binding_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00455">
        <property type="entry name" value="AMP_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0007">Acetylation</keyword>
    <keyword evidence="4" id="KW-0436">Ligase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AMP-binding" evidence="2">
        <location>
            <begin position="29"/>
            <end position="447"/>
        </location>
    </feature>
    <feature type="domain" description="AMP-binding_C" evidence="3">
        <location>
            <begin position="456"/>
            <end position="530"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022990"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF13193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ72370.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="543" mass="60045" checksum="861986EF5BA28A57" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AE62</accession>
    <name>A0A0M7AE62_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03207</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72510.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03207"/>
    <dbReference type="EnsemblBacteria" id="CTQ72510">
        <property type="protein sequence ID" value="CTQ72510"/>
        <property type="gene ID" value="LAX5112_03207"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="250"/>
            <end position="271"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="76"/>
            <end position="249"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="281"/>
            <end position="410"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="91"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="120"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="146"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="228"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="336"/>
            <end position="369"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="379"/>
            <end position="393"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ72510.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="589" mass="61084" checksum="AE49FF94DBC8E065" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEA9</accession>
    <name>A0A0M7AEA9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">HxlR-like helix-turn-helix</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03384</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72957.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672790.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72957">
        <property type="protein sequence ID" value="CTQ72957"/>
        <property type="gene ID" value="LAX5112_03384"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002577">
        <property type="entry name" value="HTH_HxlR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01638">
        <property type="entry name" value="HxlR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51118">
        <property type="entry name" value="HTH_HXLR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH hxlR-type" evidence="1">
        <location>
            <begin position="18"/>
            <end position="110"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51118"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72957.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="118" mass="12551" checksum="CA5A362607671747" modified="2015-12-09" version="1">MTDIPIPGKAVRGSRSGAPIMALFDLLGRRWAMGVVWTLSEQGPCTFRALQAACETISPAVLNARLKELRAAGFVTQGDGGYCVSPLGQEVYEALLPLSKVSKVWAARIEQSGSDASE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AF32</accession>
    <name>A0A0M7AF32_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03114</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72254.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672591.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03114"/>
    <dbReference type="EnsemblBacteria" id="CTQ72254">
        <property type="protein sequence ID" value="CTQ72254"/>
        <property type="gene ID" value="LAX5112_03114"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018759">
        <property type="entry name" value="BBP2_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011250">
        <property type="entry name" value="OMP/PagP_b-brl"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10082">
        <property type="entry name" value="BBP2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56925">
        <property type="entry name" value="SSF56925"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809447" evidence="2">
        <location>
            <begin position="26"/>
            <end position="490"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="28"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="37"/>
            <end position="52"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ72254.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="490" mass="51851" checksum="80EF3C2DB796D200" modified="2015-12-09" version="1">MTRFLTCIICLPLAFALAESSFAQTAVPGLRGSDDPGRANAADEDGREEAETRAGMNPAQSNVFALRPSVNIAEEEDGSTGLGAAGRVQPVRPFSDRITAVTRAVPLAQGGIDDTVFGGDTTFDAPDGIRLGSFILTPQLTVTTGYTDNTSRSATGGAGSLYRIAPDISLTSDWVRHQFDASLRGSYIGYPGNPDDDDIFGSAAAGLRLDITEATRVDADISYGISREEDGSAESLGNDTFIHEGNIDLGVTRNVGLLAATAAVGADRRVYDSDSTIESGRDNTVYSASLRLGSNAGGLLSPFAQGSLLFRRFDQTCSDSICEIRDADGYELRGGLAIAAGPKLVGEVSAGWRLEDIEDSRLKNLSGLVIDGSLVWSPSRLTTVTAGVGTSFDATDIDNASGSIIYSGDLRLAHAFSDRWVGEAGLGYSYRTYEGVSIEENTLTGFGGMTYALTQNVALTANYIHRRFESSQDGGDYTENAIEAGLRFRH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGP4</accession>
    <name>A0A0M7AGP4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03294</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72774.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672720.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72774">
        <property type="protein sequence ID" value="CTQ72774"/>
        <property type="gene ID" value="LAX5112_03294"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="80"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="122"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="148"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="15"/>
            <end position="29"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ72774.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="178" mass="19753" checksum="8EE7F4439856938A" modified="2015-12-09" version="1">MGIASLGRAAAKRQWQSKPIDDGKTATDDSEPTPFEQLTKYIPTETITFFVAAIGARQVVIDSWRAGHPDQDLPWWGDPWLLLIVFVILTPLMLWLTAASAFKRGQNSGQIPPDAKFETPWFDMIASTIAFFVWSFSVPGLWEAVNPGVNAIAGLSALVVSWFLAMIEPFFNKKDIPV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AH64</accession>
    <name>A0A0M7AH64_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03577</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73560.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ73560">
        <property type="protein sequence ID" value="CTQ73560"/>
        <property type="gene ID" value="LAX5112_03577"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ73560.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="253" mass="27588" checksum="03D1CA88BE2FBC22" modified="2015-12-09" version="1">MLAFFEISPISILKAAFLALSVLITSVSVTEIAKADPITIYTTELDGHHQQDLRGRYDQIVLSAARQQDLKVDFRFMPPARAILQFSKCEDCCVSPCNEDPEISHCPGATLSDVWDKVELHAFSLRPDAPDLAIDNLKTLNVGAIQGMPLGSKVETNLTGIRRVDTPRAAVNMLTLGRLDVFLGWIPETLVYFRVNDIPVPDYDAKNPLKSVPIGIACKGSQSLRLIDAVNTYLHQAPQTSGTTPGTSSNPDG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AI63</accession>
    <name>A0A0M7AI63_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">3-isopropylmalate dehydratase small subunit</fullName>
            <ecNumber evidence="10">4.2.1.33</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10">Alpha-IPM isomerase</fullName>
            <shortName evidence="10">IPMI</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="10">Isopropylmalate isomerase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="12" type="primary">leuD_1</name>
        <name evidence="10" type="synonym">leuD</name>
        <name evidence="12" type="ORF">LAX5112_03690</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2 10">Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 10">
            <text>(2R,3S)-3-isopropylmalate = (2S)-2-isopropylmalate</text>
            <dbReference type="Rhea" id="RHEA:32287"/>
            <dbReference type="ChEBI" id="CHEBI:1178"/>
            <dbReference type="ChEBI" id="CHEBI:35121"/>
            <dbReference type="EC" id="4.2.1.33"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3 10">Amino-acid biosynthesis; L-leucine biosynthesis; L-leucine from 3-methyl-2-oxobutanoate: step 2/4.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5 10">Heterodimer of LeuC and LeuD.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4 10">Belongs to the LeuD family. LeuD type 1 subfamily.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.33" evidence="10"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ73910.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008193412.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03690"/>
    <dbReference type="EnsemblBacteria" id="CTQ73910">
        <property type="protein sequence ID" value="CTQ73910"/>
        <property type="gene ID" value="LAX5112_03690"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00048">
        <property type="reaction ID" value="UER00071"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009316">
        <property type="term" value="C:3-isopropylmalate dehydratase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003861">
        <property type="term" value="F:3-isopropylmalate dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009098">
        <property type="term" value="P:leucine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01577">
        <property type="entry name" value="IPMI_Swivel"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.19.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01031">
        <property type="entry name" value="LeuD_type1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004431">
        <property type="entry name" value="3-IsopropMal_deHydase_ssu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015928">
        <property type="entry name" value="Aconitase/3IPM_dehydase_swvl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000573">
        <property type="entry name" value="AconitaseA/IPMdHydase_ssu_swvl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033940">
        <property type="entry name" value="IPMI_Swivel"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00694">
        <property type="entry name" value="Aconitase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00171">
        <property type="entry name" value="leuD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 10" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="9 10" id="KW-0100">Branched-chain amino acid biosynthesis</keyword>
    <keyword evidence="6 10" id="KW-0432">Leucine biosynthesis</keyword>
    <keyword evidence="8 10 12" id="KW-0456">Lyase</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aconitase_C" evidence="11">
        <location>
            <begin position="1"/>
            <end position="123"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00002695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00009845"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00011271"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022430"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01031"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF00694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ73910.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="201" mass="22414" checksum="565EC17F4A6424E0" modified="2015-12-09" version="1">MEKFETLTGVAAPMPIVNIDTDMIIPKQFLKTIKRTGLGTALFHEMRTNDDGSENADFVLNKAAYRDAKILIAGDNFGCGSSREHAPWALLDFGIRCVISTSFADIFYNNCFKNGILPIQVSEDELETLMHASERGANFTLTIDLENQEIKGLESGDIAFKIDQFRKHCLINGLDDIGLTMEKAGQIDTFEDKMGESRPWV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AII9</accession>
    <name>A0A0M7AII9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04061</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ74965.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673377.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04061"/>
    <dbReference type="EnsemblBacteria" id="CTQ74965">
        <property type="protein sequence ID" value="CTQ74965"/>
        <property type="gene ID" value="LAX5112_04061"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809374" evidence="1">
        <location>
            <begin position="24"/>
            <end position="213"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74965.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="213" mass="23085" checksum="6098AE759E5A56D3" modified="2015-12-09" version="1">MFSPLSPTAIIAVAALLIVTACASQSTSEATGWFGTHDGVPPKANKVYICHGFGCVYKTPVEYSRQDLARLRVILASGRASPSAERQAIAHAVAWQERRVAVTVGSEEDVGGFDIENAGVSGQMDCIDESTNTTSLLLVTQKHKMLRHHDVSAPVARGFFLDGRYPHATATVTEKKTGTVYAVDSWVNANGKRPDIMPIDHWLAEGDRWFVST</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="31" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIS8</accession>
    <name>A0A0M7AIS8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DNA helicase</fullName>
            <ecNumber evidence="2">3.6.4.12</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">addA</name>
        <name evidence="13" type="ORF">LAX5112_03556</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + H2O = ADP + H(+) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="3.6.4.12"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="3.6.4.12" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73504.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672926.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03556"/>
    <dbReference type="EnsemblBacteria" id="CTQ73504">
        <property type="protein sequence ID" value="CTQ73504"/>
        <property type="gene ID" value="LAX5112_03556"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003678">
        <property type="term" value="F:DNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004527">
        <property type="term" value="F:exonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.320.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014151">
        <property type="entry name" value="DNA_helicase_AddA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014017">
        <property type="entry name" value="DNA_helicase_UvrD-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000212">
        <property type="entry name" value="DNA_helicase_UvrD/REP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011604">
        <property type="entry name" value="PDDEXK-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038726">
        <property type="entry name" value="PDDEXK_AddAB-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011335">
        <property type="entry name" value="Restrct_endonuc-II-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014016">
        <property type="entry name" value="UvrD-like_ATP-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11070">
        <property type="entry name" value="PTHR11070"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12705">
        <property type="entry name" value="PDDEXK_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00580">
        <property type="entry name" value="UvrD-helicase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13361">
        <property type="entry name" value="UvrD_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52980">
        <property type="entry name" value="SSF52980"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02784">
        <property type="entry name" value="addA_alphas"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51198">
        <property type="entry name" value="UVRD_HELICASE_ATP_BIND"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51217">
        <property type="entry name" value="UVRD_HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0227">DNA damage</keyword>
    <keyword evidence="8" id="KW-0234">DNA repair</keyword>
    <keyword evidence="6" id="KW-0269">Exonuclease</keyword>
    <keyword evidence="9 13" id="KW-0347">Helicase</keyword>
    <keyword evidence="9 13" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0540">Nuclease</keyword>
    <keyword evidence="4 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="UvrD-like helicase ATP-binding" evidence="11">
        <location>
            <begin position="7"/>
            <end position="490"/>
        </location>
    </feature>
    <feature type="domain" description="UvrD-like helicase C-terminal" evidence="12">
        <location>
            <begin position="512"/>
            <end position="789"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="914"/>
            <end position="936"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="28"/>
            <end position="35"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001665"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012551"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022839"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00560"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS51198"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS51217"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="CTQ73504.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="1171" mass="129444" checksum="EB44446C36C983B5" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIY2</accession>
    <name>A0A0M7AIY2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 11">sn-glycerol-3-phosphate transport system permease protein UgpE</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">araQ_5</name>
        <name evidence="11" type="synonym">ugpE</name>
        <name evidence="13" type="ORF">LAX5112_03575</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Part of the ABC transporter complex UgpABCE involved in sn-glycerol-3-phosphate import. Probably responsible for the translocation of the substrate across the membrane.</text>
    </comment>
    <comment type="function">
        <text evidence="11">Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3 11">The complex is composed of two ATP-binding proteins (UgpC), two transmembrane proteins (UgpA and UgpE) and a solute-binding protein (UgpB).</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 11">Cell inner membrane</location>
            <topology evidence="1 11">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="10">Cell membrane</location>
            <topology evidence="10">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 10">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73554.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008188752.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03575"/>
    <dbReference type="EnsemblBacteria" id="CTQ73554">
        <property type="protein sequence ID" value="CTQ73554"/>
        <property type="gene ID" value="LAX5112_03575"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055052">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008643">
        <property type="term" value="P:carbohydrate transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015794">
        <property type="term" value="P:glycerol-3-phosphate transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0001407">
        <property type="term" value="P:glycerophosphodiester transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030165">
        <property type="entry name" value="UgpE"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43744:SF8">
        <property type="entry name" value="PTHR43744:SF8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="11" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0762">Sugar transport</keyword>
    <keyword evidence="6 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 10" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="10" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="79"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="109"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="139"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="188"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="249"/>
            <end position="272"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="12">
        <location>
            <begin position="74"/>
            <end position="267"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011557"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00020515"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022597"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00025342"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU363056"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="CTQ73554.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="280" mass="31502" checksum="F8C70D4BD2FFBA45" modified="2015-12-09" version="1">MRKVQILDHVILLLGVFFMVTPVALAFMTSTHDAITIYKEGIQFLPGDKFLENYETVLFRAGGFTKEVDGFVMLMNSMILGFGFAIGKIIISMIAAYAIVYFRFPMATFCFWIIFATLLLPLEVRILPSYEIVQSLGLVNTYTGLIVPLIASATGTFFFRQFFMSVPDELLEAARIDGAGPWKFFKDILVPLSQTMIAAIFIIMFVYGWNQYLWPTLITTEESLFTLVRGIKQIMQVWVGAQIPALNEAMALAILAIVPPVLIVVVFQSWFVKGLVESDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJL4</accession>
    <name>A0A0M7AJL4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Cyclic di-GMP phosphodiesterase response regulator RpfG</fullName>
            <ecNumber evidence="2">3.1.4.52</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">rpfG_3</name>
        <name evidence="2" type="ORF">LAX5112_04180</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.4.52" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75308.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673444.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04180"/>
    <dbReference type="EnsemblBacteria" id="CTQ75308">
        <property type="protein sequence ID" value="CTQ75308"/>
        <property type="gene ID" value="LAX5112_04180"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071111">
        <property type="term" value="F:cyclic-guanylate-specific phosphodiesterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd00077">
        <property type="entry name" value="HDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003607">
        <property type="entry name" value="HD/PDEase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006674">
        <property type="entry name" value="HD_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037522">
        <property type="entry name" value="HD_GYP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006675">
        <property type="entry name" value="HDIG_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01966">
        <property type="entry name" value="HD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00471">
        <property type="entry name" value="HDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00277">
        <property type="entry name" value="HDIG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51832">
        <property type="entry name" value="HD_GYP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HD-GYP" evidence="1">
        <location>
            <begin position="169"/>
            <end position="365"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51832"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75308.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="373" mass="40896" checksum="3FB354EE519C203C" modified="2015-12-09" version="1">MPHSEVILISDGPLPMDSPVRKIPFFFGARLIDMAKVSPKTAGDASVAIIELLGSSKPGMSALKSSWGSIAEIPVIGIIDKSDRREMTQAAALGEMDLVDREAPLALLLHQVKKYLKTDILKDLPKDTPERTAQAFSKANAFLETLCMSAVSDASIQIRAMEDSAKDALSAIDLEGLLAWMQAVESHHSPTYSHSLKVAGLAGAFARHLKWSEADCREMVAGGLVHDIGKMRIPLTILDKPGRLTDEERSLIAKHPVFGQEILKPRLEVPYEIKRMAIQHHEYLDGSGYPNHLKADRISQKVRVMTICDIFTALTEERAYKEPIPPRQAIAMMKNMGPKLDQDLLRQFSDMILDRVFAELSKPVSAAGGGAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJL6</accession>
    <name>A0A0M7AJL6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Alanine racemase</fullName>
            <ecNumber evidence="4">5.1.1.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">dadX</name>
        <name evidence="8" type="ORF">LAX5112_03861</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>L-alanine = D-alanine</text>
            <dbReference type="Rhea" id="RHEA:20249"/>
            <dbReference type="ChEBI" id="CHEBI:57416"/>
            <dbReference type="ChEBI" id="CHEBI:57972"/>
            <dbReference type="EC" id="5.1.1.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 4 5">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="4">Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 4">Belongs to the alanine racemase family.</text>
    </comment>
    <dbReference type="EC" id="5.1.1.1" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74430.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673171.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03861"/>
    <dbReference type="EnsemblBacteria" id="CTQ74430">
        <property type="protein sequence ID" value="CTQ74430"/>
        <property type="gene ID" value="LAX5112_03861"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00042">
        <property type="reaction ID" value="UER00497"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008784">
        <property type="term" value="F:alanine racemase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030632">
        <property type="term" value="P:D-alanine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.37.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01201">
        <property type="entry name" value="Ala_racemase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000821">
        <property type="entry name" value="Ala_racemase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009006">
        <property type="entry name" value="Ala_racemase/Decarboxylase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011079">
        <property type="entry name" value="Ala_racemase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001608">
        <property type="entry name" value="Ala_racemase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029066">
        <property type="entry name" value="PLP-binding_barrel"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00842">
        <property type="entry name" value="Ala_racemase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01168">
        <property type="entry name" value="Ala_racemase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00992">
        <property type="entry name" value="ALARACEMASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM01005">
        <property type="entry name" value="Ala_racemase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50621">
        <property type="entry name" value="SSF50621"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51419">
        <property type="entry name" value="SSF51419"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00492">
        <property type="entry name" value="alr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 8" id="KW-0413">Isomerase</keyword>
    <keyword evidence="4 5" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ala_racemase_C" evidence="7">
        <location>
            <begin position="246"/>
            <end position="377"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor; specific for D-alanine" evidence="4">
        <location>
            <position position="47"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor; specific for L-alanine" evidence="4">
        <location>
            <position position="267"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4 6">
        <location>
            <position position="145"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4 6">
        <location>
            <position position="320"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="modified residue" description="N6-(pyridoxal phosphate)lysine" evidence="4 5">
        <location>
            <position position="47"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007880"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01201"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR600821-50"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR600821-52"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="SMART" id="SM01005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ74430.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="380" mass="40687" checksum="0C58EE19BCF516D9" modified="2015-12-09" version="1">MSEKPINAYSSALYGGRLTVDLDAIAANWSLLRSRLAPGSECAATIKANAYGTGQAETAKRLFEEGCRTFFVAVPTEAMALRQTLPSATIYALDGLFPDTADLLLQHDVRPVLGSLDELKEWAALCKTAGKSFPAAVHVDTGIHRLGLSGDEFVTALADLELMGPFKPSLFMSHLACGSDPDHPMNQEQLARFTELTSPFKGVPRSLANSAGVLMGPDYHFDLVRPGISLYGGRAFDHGDNPMQPVAKVEARIMIVRNVPKGDAIGYGATQTAKRALRNAVVAAGYADGLLRRASSSDDRPGGFGMIGGHKASILGRISMDMITLDVTDIPEHLVQRGGLVEMLGPNVAAADMAAYAETIDYEYLTSLGRRFERIYGPLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AL19</accession>
    <name>A0A0M7AL19_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04371</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75818.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008193003.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000023.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75818">
        <property type="protein sequence ID" value="CTQ75818"/>
        <property type="gene ID" value="LAX5112_04371"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="9"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="46"/>
            <end position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75818.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="80" mass="9149" checksum="C040116124F149C9" modified="2015-12-09" version="1">MSAKTAEQELLIIRLLLIIPVLNWFVKDAIYGEDDAKYWFVGNLAMVWAVCIFLFGYPAIILPALAMVPMAFLWILDVCR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALG1</accession>
    <name>A0A0M7ALG1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6 17">Ubiquinol-cytochrome c reductase iron-sulfur subunit</fullName>
            <ecNumber evidence="5 17">7.1.1.8</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="20" type="primary">petA</name>
        <name evidence="20" type="ORF">LAX5112_04172</name>
    </gene>
    <organism evidence="20 21">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="21" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="21">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="16 17">
            <text>a quinol + 2 Fe(III)-[cytochrome c](out) = a quinone + 2 Fe(II)-[cytochrome c](out) + 2 H(+)(out)</text>
            <dbReference type="Rhea" id="RHEA:11484"/>
            <dbReference type="Rhea" id="RHEA-COMP:10350"/>
            <dbReference type="Rhea" id="RHEA-COMP:14399"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:24646"/>
            <dbReference type="ChEBI" id="CHEBI:29033"/>
            <dbReference type="ChEBI" id="CHEBI:29034"/>
            <dbReference type="ChEBI" id="CHEBI:132124"/>
            <dbReference type="EC" id="7.1.1.8"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="17">
            <name>2Fe-2S cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49601"/>
        </cofactor>
        <text evidence="17">Binds 1 [2Fe-2S] cluster per subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4 18">The main subunits of complex b-c1 are: cytochrome b, cytochrome c1 and the Rieske protein.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="miscellaneous">
        <text evidence="17">The Rieske protein is a high potential 2Fe-2S protein.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the Rieske iron-sulfur protein family.</text>
    </comment>
    <dbReference type="EC" id="7.1.1.8" evidence="5 17"/>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75282.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008191519.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04172"/>
    <dbReference type="EnsemblBacteria" id="CTQ75282">
        <property type="protein sequence ID" value="CTQ75282"/>
        <property type="gene ID" value="LAX5112_04172"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051537">
        <property type="term" value="F:2 iron, 2 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008121">
        <property type="term" value="F:ubiquinol-cytochrome-c reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.102.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017941">
        <property type="entry name" value="Rieske_2Fe-2S"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036922">
        <property type="entry name" value="Rieske_2Fe-2S_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014349">
        <property type="entry name" value="Rieske_Fe-S_prot"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005805">
        <property type="entry name" value="Rieske_Fe-S_prot_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006311">
        <property type="entry name" value="TAT_signal"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019546">
        <property type="entry name" value="TAT_signal_bac_arc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019470">
        <property type="entry name" value="Ubiq_cytC_Rdtase_Fe-S_su_TAT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006317">
        <property type="entry name" value="Ubiquinol_cyt_c_Rdtase_Fe-S-su"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10134">
        <property type="entry name" value="PTHR10134"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00355">
        <property type="entry name" value="Rieske"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10399">
        <property type="entry name" value="UCR_Fe-S_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00162">
        <property type="entry name" value="RIESKE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50022">
        <property type="entry name" value="SSF50022"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01416">
        <property type="entry name" value="Rieske_proteo"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01409">
        <property type="entry name" value="TAT_signal_seq"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51296">
        <property type="entry name" value="RIESKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0001">2Fe-2S</keyword>
    <keyword evidence="7" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="15" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="17" id="KW-0249">Electron transport</keyword>
    <keyword evidence="12" id="KW-0408">Iron</keyword>
    <keyword evidence="13" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="14 17" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="20" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="21" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 17" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="11 17" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="17" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="17">
        <location>
            <begin position="14"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="domain" description="Rieske" evidence="19">
        <location>
            <begin position="85"/>
            <end position="184"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002444"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011649"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012951"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00019816"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022714"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00029351"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="RuleBase" id="RU004494"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="RuleBase" id="RU004497"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="19">
        <source>
            <dbReference type="PROSITE" id="PS51296"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="EMBL" id="CTQ75282.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="21">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="186" mass="19696" checksum="DA920C8419138003" modified="2015-12-09" version="1">MANTDQAEPTRRDFLYIATGAMGVVGAGALVWPFIDQMNPDASALALASIEVDVSAVEEGQSISVKWRGKPVFIRNRTDAEVEDANAVAVSDLPDPLARNANLPADAEATDVNRGIEGNEKLLVQVGICTHLGCVPVGDAGEYGGWFCPCHGSHYDTAGRIRKGPAPENLLIPPLEMVSETTIKIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMB5</accession>
    <name>A0A0M7AMB5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Aliphatic sulfonates import ATP-binding protein SsuB</fullName>
            <ecNumber evidence="6">3.6.3.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">ssuB_4</name>
        <name evidence="6" type="ORF">LAX5112_04545</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.-" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000025">
        <property type="protein sequence ID" value="CTQ76275.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673733.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000025.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04545"/>
    <dbReference type="EnsemblBacteria" id="CTQ76275">
        <property type="protein sequence ID" value="CTQ76275"/>
        <property type="gene ID" value="LAX5112_04545"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="3"/>
            <end position="232"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="35"/>
            <end position="42"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ76275.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="255" mass="27972" checksum="9639D5C6D30C3F79" modified="2015-12-09" version="1">MDLRLEGVGHAYDTVTVLEDITLDVPSGHIVCIVGPSGCGKSTLLRFIGGLEQPTKGRVVQVGSPPPGSLNPLTYVFQDFALLPWRTVEGNVSLVLEDHGIKGPETREIISDVLARTNLTGFEKALPKQLSGGMKQRVAIARALAVRPAVMLMDEPLSALDSQTRELLMDDLVGLWTRTPFTSVYVTHNLAEAVRLGHSIVVLSRRPGKIREIVTLDKPLEDRQLGDTDLEKTQKHLWSLLREEARTADTELLDG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AN09</accession>
    <name>A0A0M7AN09_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Copper export regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">hmrR_2</name>
        <name evidence="2" type="ORF">LAX5112_04369</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75812.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04369"/>
    <dbReference type="EnsemblBacteria" id="CTQ75812">
        <property type="protein sequence ID" value="CTQ75812"/>
        <property type="gene ID" value="LAX5112_04369"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009061">
        <property type="entry name" value="DNA-bd_dom_put_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000551">
        <property type="entry name" value="MerR-type_HTH_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13411">
        <property type="entry name" value="MerR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00040">
        <property type="entry name" value="HTHMERR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00422">
        <property type="entry name" value="HTH_MERR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46955">
        <property type="entry name" value="SSF46955"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00552">
        <property type="entry name" value="HTH_MERR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50937">
        <property type="entry name" value="HTH_MERR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH merR-type" evidence="1">
        <location>
            <begin position="1"/>
            <end position="70"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50937"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75812.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="133" mass="14639" checksum="BDC7DA3449A99E42" modified="2015-12-09" version="1">MIAIGEASRLSGVSIETIRYYEREGIISKAGRTKSGRRTYSDAEISELRFIKRCRDLGFSIHDAVALRDLANEPTDACETVENLGQKHLAKVQAKITELRQLESALTELVTNCAKGQSSCPMLEALANGQEHS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANE5</accession>
    <name>A0A0M7ANE5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Ribonuclease I</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_04122</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the RNase T2 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75134.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673386.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04122"/>
    <dbReference type="EnsemblBacteria" id="CTQ75134">
        <property type="protein sequence ID" value="CTQ75134"/>
        <property type="gene ID" value="LAX5112_04122"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033897">
        <property type="term" value="F:ribonuclease T2 activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01062">
        <property type="entry name" value="RNase_T2_prok"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.730.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001568">
        <property type="entry name" value="RNase_T2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036430">
        <property type="entry name" value="RNase_T2-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018188">
        <property type="entry name" value="RNase_T2_His_AS_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033130">
        <property type="entry name" value="RNase_T2_His_AS_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039378">
        <property type="entry name" value="RNase_T2_prok"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11240">
        <property type="entry name" value="PTHR11240"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00445">
        <property type="entry name" value="Ribonuclease_T2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55895">
        <property type="entry name" value="SSF55895"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00530">
        <property type="entry name" value="RNASE_T2_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00531">
        <property type="entry name" value="RNASE_T2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809556" evidence="3">
        <location>
            <begin position="27"/>
            <end position="219"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007469"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU004328"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ75134.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="219" mass="24504" checksum="FDF587DE01399D9B" modified="2015-12-09" version="1">MRLAKFLQHVAVAAIVAFGFSPTVQADTPGDFDFYVLAMSWSPAYCREAGPNASPHQCDARTPFRFIVHGLWPQYDRGYPESCDTSQRRIDRQIAFDMDDIMPSHGLIFHQWRKHGTCSGLTPEDYFDLTRDAFEKVQIPKAFRTINKRGQAAPSKIEAAFSSVNPGLSKDGIAVVCERGELQEVRICMSKDLEFRSCPSVDRNGCRSGTLTVVPPLAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANW6</accession>
    <name>A0A0M7ANW6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Phage Tail Protein X</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04409</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75920.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673620.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000023.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04409"/>
    <dbReference type="EnsemblBacteria" id="CTQ75920">
        <property type="protein sequence ID" value="CTQ75920"/>
        <property type="gene ID" value="LAX5112_04409"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008861">
        <property type="entry name" value="GpX-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05489">
        <property type="entry name" value="Phage_tail_X"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ75920.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="74" mass="8011" checksum="C9DD3335620F55DD" modified="2015-12-09" version="1">MPQTVPVRGDNLTADLLLWRIHGVRGQELLEEMLELNPGLAAKGVLLVPGDSVIVPDLPPEEPFAAREVVTLFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANZ4</accession>
    <name>A0A0M7ANZ4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Cold shock protein CspA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">cspA_3</name>
        <name evidence="3" type="ORF">LAX5112_04480</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ76136.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040452710.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000024.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04480"/>
    <dbReference type="EnsemblBacteria" id="CTQ76136">
        <property type="protein sequence ID" value="CTQ76136"/>
        <property type="gene ID" value="LAX5112_04480"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd04458">
        <property type="entry name" value="CSP_CDS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012156">
        <property type="entry name" value="Cold_shock_CspA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011129">
        <property type="entry name" value="CSD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002059">
        <property type="entry name" value="CSP_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00313">
        <property type="entry name" value="CSD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002599">
        <property type="entry name" value="Cold_shock_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00050">
        <property type="entry name" value="COLDSHOCK"/>
    </dbReference>
    <dbReference type="SMART" id="SM00357">
        <property type="entry name" value="CSP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51857">
        <property type="entry name" value="CSD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CSD" evidence="2">
        <location>
            <begin position="1"/>
            <end position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ76136.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="69" mass="7451" checksum="36F6C4314EAE868B" modified="2015-12-09" version="1">MTTGTVKWFNSTKGFGFIQPDNGGPDAFVHISAVERAGMHEIVEGQKIGYDMERDSKSGKMSACNLQAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APS7</accession>
    <name>A0A0M7APS7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04536</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000025">
        <property type="protein sequence ID" value="CTQ76250.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76250">
        <property type="protein sequence ID" value="CTQ76250"/>
        <property type="gene ID" value="LAX5112_04536"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ76250.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="43" mass="5147" checksum="7644CD1F253C437C" modified="2015-12-09" version="1">MIVQVAKTLLVNHRQDYNRDRLPWLPARLYRSLREARQGRKAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQ27</accession>
    <name>A0A0M7AQ27_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04655</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000027">
        <property type="protein sequence ID" value="CTQ76621.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76621">
        <property type="protein sequence ID" value="CTQ76621"/>
        <property type="gene ID" value="LAX5112_04655"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ76621.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="194" mass="21670" checksum="D5843BCA8765AFA9" modified="2015-12-09" version="1">MQCGGFGEGCHALGRGEGPGQQARRDRVDLRPAWKQPAVGPCLTPVIAQHVQKIGRQHGLVILAALALIDMDQLRDFLHAQHNGQWPRLALKLHMPLHVLAPAGHAAKEPKGNDPDIECRRRHPRIRHVQLIAAQLFRSRRIGWTAKVRCKILDGPDMALLSLLAYATNVHVFDHSLAQWRGSLLRHENLLSDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQ31</accession>
    <name>A0A0M7AQ31_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Gcv operon activator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">gcvA_14</name>
        <name evidence="3" type="ORF">LAX5112_04631</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000027">
        <property type="protein sequence ID" value="CTQ76552.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673817.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000027.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04631"/>
    <dbReference type="EnsemblBacteria" id="CTQ76552">
        <property type="protein sequence ID" value="CTQ76552"/>
        <property type="gene ID" value="LAX5112_04631"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="4"/>
            <end position="61"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ76552.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="289" mass="32042" checksum="08A98719DB73209E" modified="2015-12-09" version="1">MPRIDLNAIDLFVTSARAGSLSKAARSIGQPLPTVSRKIRQLEQDLGLRLFERSQKGLVLTNAGTRLLSNAEPAIGMLSQSVQGISDAAGIAGTLRLSIPPHMRPLWPVLSRFRDRHQAVHLDILVTNRRVDMIEDGIDVVLRIGEGGGRNYVGRTLTRYRHKVLATRDFLDIQRVNAPSDLEQAVTACWQTDGPPVWVLGDTSVQLSPIVMTNDYEHLLQLALDGQAIVEVPPFMAKNALTNGRLVEVLPDKPMPLRDVRLLVIEKRELAPLIREFFDFAAKAIPEAF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQF6</accession>
    <name>A0A0M7AQF6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">N-glycosyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04694</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000028">
        <property type="protein sequence ID" value="CTQ76741.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673875.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000028.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04694"/>
    <dbReference type="EnsemblBacteria" id="CTQ76741">
        <property type="protein sequence ID" value="CTQ76741"/>
        <property type="gene ID" value="LAX5112_04694"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="18"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="297"/>
            <end position="330"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="336"/>
            <end position="360"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76741.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="408" mass="44057" checksum="08D9E6749D3AB24F" modified="2015-12-09" version="1">MPATDTIALLEAVTYTGLLVWVSITLVLTAVYCIEVLAAAFLPKRQIQCSEERVPMVVLIPAHNEEAGLAKTLKASQKGLYPCDRILVVADNCTDNTASVARRNGAEVIERNDPDHRGKGYALDFGVRHLEQNPPGCVVILDADCVPEASALDRTRQVAGHLVRPVQARYLMTQSEDTIAQKVSVFTFRLKNWVRLLGVCNLGGPSLLTGSGMAFPWNVLAKADLAHGHLVEDMKLGMDLASQGTPPIFCDEAIILSPLPQSVDGAATQRSRWVRGHLSLMGVALSRLPKNLAQGKWSAAVLAVSVLVPPLTILIILQGVAAVSSLILTALLKLPFLPLGMAFGTMVAFLIATLVAWWGYGRDVIPARSLLGLVAHVLVRIAKYPAAVFRPKRTGWARTERDADSSEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQL1</accession>
    <name>A0A0M7AQL1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Formyl-coenzyme A transferase</fullName>
            <ecNumber evidence="1">2.8.3.16</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">frc_4</name>
        <name evidence="1" type="ORF">LAX5112_04460</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.8.3.16" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ76083.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673665.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000024.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04460"/>
    <dbReference type="EnsemblBacteria" id="CTQ76083">
        <property type="protein sequence ID" value="CTQ76083"/>
        <property type="gene ID" value="LAX5112_04460"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033608">
        <property type="term" value="F:formyl-CoA transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1540.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10540">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003673">
        <property type="entry name" value="CoA-Trfase_fam_III"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044855">
        <property type="entry name" value="CoA-Trfase_III_dom3_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023606">
        <property type="entry name" value="CoA-Trfase_III_dom_1_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02515">
        <property type="entry name" value="CoA_transf_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89796">
        <property type="entry name" value="SSF89796"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ76083.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="400" mass="43146" checksum="861991CC0C9AF786" modified="2015-12-09" version="1">MRAFKGLRVIDFTRALSGPMAAQMLALLDADVVKVEPPGVGDQLRGVLASPEMAEKRLSPAFLTGNLRKRSLALDLKSELGQEAAERLVSAADVVIENFVPGTAKKLGIDYETVRKANSDVIYCSISGYGQTGPRASEKAYDSAIQADSGMMSLTGFPETGPTRIGFMLVDVTTGVSAAYAIAAALYRRAMTGKGQFLDVAMYDTALQLMCCQGADYLVRGHLPPLMGNESPMTQPTAGTFETLDGMILLATLTSDQQEGAFKALGLAELLEDPRFSSELARHKHHEEGRELIRRVLRGQTTQDWLKILKAYGVPVQAVRDLGQALSDPQLDHRGLLVEAGKLDETSDPVTLLGAPFVANEDGPHQKAEPPFQVGQHSREVLEELGFSASEITKCLETTP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQR2</accession>
    <name>A0A0M7AQR2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Mycofactocin system glycosyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_04701</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000028">
        <property type="protein sequence ID" value="CTQ76762.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04701"/>
    <dbReference type="EnsemblBacteria" id="CTQ76762">
        <property type="protein sequence ID" value="CTQ76762"/>
        <property type="gene ID" value="LAX5112_04701"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001173">
        <property type="entry name" value="Glyco_trans_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13632">
        <property type="entry name" value="Glyco_trans_2_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00535">
        <property type="entry name" value="Glycos_transf_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="263"/>
            <end position="291"/>
        </location>
    </feature>
    <feature type="domain" description="Glyco_trans_2-like" evidence="2">
        <location>
            <begin position="29"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="domain" description="Glyco_trans_2-like" evidence="3">
        <location>
            <begin position="171"/>
            <end position="295"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00535"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF13632"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ76762.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="346" mass="39262" checksum="C45AE32303D309C1" modified="2015-12-09" version="1">MAPRSTPYYRSFPLAACNGNGPAQMTIGIVIIGRNEGERFQNCIRSLQGGPDRVVYVDSGSTDQSVSTAKDAGFQVETLPADRPFTAARARNAGYRRLVQKFPDTTFIQFMDGDCQLDAGWLKAGLEFLNNQPDVALAFGRRRELFPDASIYNAMCDLEWNTPIGERQECGGDCLVRRTAFDDAGGYRDDLIAGEEPEMCLRLREKGWRIWRLDAEMTLHDADLQRFSQWWKRSVRAGHAFAEVSWLHRNSPKRIWQRNVVRAVLWGAGLPTVTLVAGLFHPAFLLLFLLYPLQLVRLILRSIRAGHPAAIGCFELLGKSAELQGVLKYHWNRLLMRRTKLIEYKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQW5</accession>
    <name>A0A0M7AQW5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04743</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000029">
        <property type="protein sequence ID" value="CTQ76901.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76901">
        <property type="protein sequence ID" value="CTQ76901"/>
        <property type="gene ID" value="LAX5112_04743"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="316"/>
            <end position="339"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76901.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="397" mass="43434" checksum="27DF6BA4382339F6" modified="2015-12-09" version="1">MGIQLFQTAFQFGLDRLGCLLQRRFRRHIVRVGVDLHRLHVAGFLARQRVELGDLLDLVAEQRNPPRPVLIVRRKEFNCVPADAKSAALERGVVAFVLQGDQIGDQLALVDPLSDLDGEGHRRVGLDRADTVDAGDGGDDDDVVTLQQRAGGRVAHPVDLLVDRAFLLDIGVGTRDVGLRLVIVVVGDEILDRIVREETLELAIKLGRQRLVRRQDQRRALGALDDLRHGVGLARAGDPEQHLGLLAGRDATHKFGNRGRLVALRLVLGGQVDRDAAFGFFWPVRPVWHPEFAILVQRVAAFDQGRQGLDGRGCALLAAQLAIAAIGGGFLFVVFLVLFELGLEFLGLLQRHVQPGHGIKTPGSPLARRVRLAHTGSARGFGWFLLFCARGRTGLAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AR41</accession>
    <name>A0A0M7AR41_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Ketosteroid isomerase-related protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04980</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000037">
        <property type="protein sequence ID" value="CTQ77615.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008194415.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000037.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04980"/>
    <dbReference type="EnsemblBacteria" id="CTQ77615">
        <property type="protein sequence ID" value="CTQ77615"/>
        <property type="gene ID" value="LAX5112_04980"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011721">
        <property type="entry name" value="CHP02096"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032710">
        <property type="entry name" value="NTF2-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037401">
        <property type="entry name" value="SnoaL-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12680">
        <property type="entry name" value="SnoaL_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54427">
        <property type="entry name" value="SSF54427"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02096">
        <property type="entry name" value="TIGR02096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0413">Isomerase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SnoaL-like" evidence="1">
        <location>
            <begin position="12"/>
            <end position="120"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12680"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77615.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="142" mass="15964" checksum="AB1F9189829A669F" modified="2015-12-09" version="1">MPNKQSRFLIDTYFAAFNAGDTKKMESLVAEDLIHDVNQGGRRLGKDAFWSFNVHMTRCYKERLTDIVLFVNEEGTRAAAEFIVHGTYIATDEGLPEADGQTYALPAGSFFEIRDGQIARITTYYNLQDWIAQVGGEVKEAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AR98</accession>
    <name>A0A0M7AR98_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">2-deoxystreptamine glucosyltransferase</fullName>
            <ecNumber evidence="2">2.4.1.284</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">kanF_1</name>
        <name evidence="2" type="ORF">LAX5112_04704</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.4.1.284" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000028">
        <property type="protein sequence ID" value="CTQ76770.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673889.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000028.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04704"/>
    <dbReference type="EnsemblBacteria" id="CTQ76770">
        <property type="protein sequence ID" value="CTQ76770"/>
        <property type="gene ID" value="LAX5112_04704"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102318">
        <property type="term" value="F:2-deoxystreptamine glucosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001296">
        <property type="entry name" value="Glyco_trans_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00534">
        <property type="entry name" value="Glycos_transf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glycos_transf_1" evidence="1">
        <location>
            <begin position="229"/>
            <end position="384"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00534"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76770.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="430" mass="48421" checksum="1A93532527E8739B" modified="2015-12-09" version="1">MKKPRVLILADDCNPDWPSLPVVGYKYALSLAKFCDVTIATHVRNRENIEKDPRSKGVEFRYVDNEYVAKPIHRFSTWIRGGGKVAWSMAMIFQYPTYLAFEWEVWKAFKGALQSGEFDLVHRITPMSPTMPSYIAGKSPVPFVIGPLNGNLDWPKEFRSEQTREKERARALRDFYKYLPYSSATYRNAELILAAFDHTAKDLPEGAASKVVSFPEVGFDPEWFDGTDRKPAFSGDGPYNFAFIGRLVPYKVPEVAVRAFCKSEILAEHKLHIVGDGPERERLEAIVEQTGRSDSVIFHGWIEQRDVGQFLQSVDGFVFPSIRELGAGVVVEAMASGCVNFVTNYGAPGDLVSEGRGFRIELNTLDAMVAGYQHAMEEAVTKPADQLSKANSAVEYAKDCFTWDRKAALTVPYYEDLIAGRPMTDRRDYS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARW0</accession>
    <name>A0A0M7ARW0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Dipeptide transport system permease protein DppC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">dppC_2</name>
        <name evidence="8" type="ORF">LAX5112_04553</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="6">Cell membrane</location>
            <topology evidence="6">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000026">
        <property type="protein sequence ID" value="CTQ76314.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673748.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000026.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04553"/>
    <dbReference type="EnsemblBacteria" id="CTQ76314">
        <property type="protein sequence ID" value="CTQ76314"/>
        <property type="gene ID" value="LAX5112_04553"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025966">
        <property type="entry name" value="OppC_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12911">
        <property type="entry name" value="OppC_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="42"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="177"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="239"/>
            <end position="257"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="293"/>
            <end position="312"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="348"/>
            <end position="368"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="7">
        <location>
            <begin position="173"/>
            <end position="369"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ76314.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="383" mass="42474" checksum="05106218513230EF" modified="2015-12-09" version="1">MTDATAGQLSAQEEKERQKRLKYYSASQWTLIWWRFKRHRTAMIASIILGLMALMGIFAEFVAPYGPTTRDTKYIDGAPQIPVFCDQNGCSIQPFIHGVSTKRDPVTLRAISIPDPEKRVYVTFFATGEETRVLGFIPTKRHLFGLSDAEAKLHLWGTDSLGRDVFSRTMYATRTSLSIGVIGVLISFVMALLIGGIAGYAGGMTDNVIQRVTEVVRVVPIIPLYMGLAAAMPKEWSTMQVYFAMTLILGFFGWPTLARRIRSQLLSIRNEDYVVAARLAGARPGRIIGQHMLPSFTSFIIVDLVISFPYMILAETALSFVGLGLRPPTVSWGVLLQQAQSVRVIEQTPWLFIPALFVVVAVLAFTVIGDGLRDAADPYSEAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARW7</accession>
    <name>A0A0M7ARW7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Levodione reductase</fullName>
            <ecNumber evidence="1">1.1.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">lvr</name>
        <name evidence="1" type="ORF">LAX5112_04772</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.1.1.-" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000030">
        <property type="protein sequence ID" value="CTQ77000.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673935.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000030.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04772"/>
    <dbReference type="EnsemblBacteria" id="CTQ77000">
        <property type="protein sequence ID" value="CTQ77000"/>
        <property type="gene ID" value="LAX5112_04772"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ77000.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="262" mass="27662" checksum="1148152FF6E01302" modified="2015-12-09" version="1">MADQRFAGQTVMITGAAGGFGAEAARKFAALGARLALSDRDESGLEQFRTELQDIGADVWVEAYDVGNEDQTKAHIDQILKRFGSLDIALNNAGVCHDLKPLTQLAVDDLDRMFAVNVRGVFLGMKYQIPVMAKAGRGAIINMASAAGLVGAGMLSAYAASKHAVVGLTRSAADETGRIGVRINAVCPSFAQTAMYQNFSEALAESQNRPASEIDAAFTKRSPMGRVIRSDEVISAVLWLADPHNTAVHGQAIPVDGGLTAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASN6</accession>
    <name>A0A0M7ASN6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Spermidine/putrescine import ATP-binding protein PotA</fullName>
            <ecNumber evidence="8">3.6.3.31</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">potA_4</name>
        <name evidence="8" type="ORF">LAX5112_04639</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.31" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000027">
        <property type="protein sequence ID" value="CTQ76574.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673824.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000027.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76574">
        <property type="protein sequence ID" value="CTQ76574"/>
        <property type="gene ID" value="LAX5112_04639"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008995">
        <property type="entry name" value="Mo/tungstate-bd_C_term_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013611">
        <property type="entry name" value="Transp-assoc_OB_typ2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08402">
        <property type="entry name" value="TOBE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50331">
        <property type="entry name" value="SSF50331"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ABC transporter" evidence="7">
        <location>
            <begin position="7"/>
            <end position="237"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="39"/>
            <end position="46"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ76574.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="330" mass="35623" checksum="ECFB6A3B31DC75FC" modified="2015-12-09" version="1">MVQSLELELAAVTKAYGATIAVDAIDHRFSAGSYSCLLGPSGCGKSSTLRMIAGHEGVSAGDIIFGGTNITDLPPAKRGTAMMFQNYALFPHLSVLDNVGFSQKMRGVGLADRNKKALQLLELVDMADYAVRLPAQLSGGQQQRVALARALITEPSVLLLDEPLSALDPFLRIKMRLELKRLQRELGISFIHVTHSQDEALALADDIIVMNNGRIEQADSPRVVFNAPTTEFVARFIGGHNVLQHQNARVALRADRLQVLKSAPQAADHLTASVVDVEYLGSTVNLALDADGAGDLTAALSEETFFQDPIEIGTTVFLKWEPEDVHQLAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AT29</accession>
    <name>A0A0M7AT29_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04904</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000034">
        <property type="protein sequence ID" value="CTQ77420.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674047.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000034.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77420">
        <property type="protein sequence ID" value="CTQ77420"/>
        <property type="gene ID" value="LAX5112_04904"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ77420.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="205" mass="22095" checksum="693F30AABA5440FC" modified="2015-12-09" version="1">MTILQNTLNHLLENVIPASQDYIAAEEKLSRAFNNSPNRDDPHTWQKEAAGAKRNAANLAIAIDGLADRAAKETGISKSQIRRELRPLCLFGAGGYLREDAHDRVRGVANIYKHDEANDTSIPISSSGEVLAVGLGYGLDAFGVGKMSGPEVLVGRDPENQKKFLGDFLAAITAWFAWLHAKGVDVSDHPVKLCGVQVNPAPVSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AT73</accession>
    <name>A0A0M7AT73_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Probable membrane transporter protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">LAX5112_05001</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the 4-toluene sulfonate uptake permease (TSUP) (TC 2.A.102) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000039">
        <property type="protein sequence ID" value="CTQ77662.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674132.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000039.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77662">
        <property type="protein sequence ID" value="CTQ77662"/>
        <property type="gene ID" value="LAX5112_05001"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002781">
        <property type="entry name" value="TM_pro_TauE-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01925">
        <property type="entry name" value="TauE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="6"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="35"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="75"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="101"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="131"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="166"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="223"/>
            <end position="242"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363041"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ77662.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="243" mass="25516" checksum="4CF55B9232484698" modified="2015-12-09" version="1">MEVSHALDAFLLANCAVVIAALIQTSTGMGFAMIAAPLLALVSISFVPGPMLFINLFLSVFMLGDGRSHVVRREILALGPAILVGTLIGAAILSRIPGDRLAVVFASLILLAVAISIFAKAPPFTSRNLSICGVAVGIMGSTSGIPGAPLVIMYQNEPLEKTRPTMALVFTFSYITSLCALAYVGVFNVRLALDGLMLFPGLLIGYGFGRWARRFMTQAVGRILMLSIASTGSVLLIAKSVLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AU39</accession>
    <name>A0A0M7AU39_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Dipeptide transport system permease protein DppC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">dppC_3</name>
        <name evidence="8" type="ORF">LAX5112_04807</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="6">Cell membrane</location>
            <topology evidence="6">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000031">
        <property type="protein sequence ID" value="CTQ77114.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451208.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000031.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04807"/>
    <dbReference type="EnsemblBacteria" id="CTQ77114">
        <property type="protein sequence ID" value="CTQ77114"/>
        <property type="gene ID" value="LAX5112_04807"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025966">
        <property type="entry name" value="OppC_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12911">
        <property type="entry name" value="OppC_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="32"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="104"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="146"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="172"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="225"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="281"/>
            <end position="305"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="7">
        <location>
            <begin position="102"/>
            <end position="302"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ77114.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="314" mass="33945" checksum="A8B4E532D93983ED" modified="2015-12-09" version="1">MADVSTPNSEPKGRLARIIDSDLFHSFLRSKVTVVAAVMTLILFLVAFLAPWVAPHNPFDLATISILDARVPPVWMEFADPRFLLGTDDQGRDLLSGIFYGMRISLIVGFCSVISAAIIGITAGLVAGYMGGRVDAIIMRIADVQLTFPAILIALLIDGVAAGIFGGIDREIFAFYILIVALALSFWVQYARTVRGSTMVEKNKEYVQAARVIGIPSVIIMVRHILPNVMGPVLVIATINLALAIVTESSLSFLGVGMPPTQPSLGTLIAIGNDFLYSGEWWIAIFPGIALALLVLNVNLLGDWLRDALNPKLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZLV6</accession>
    <name>A0A0M6ZLV6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">C-N hydrolase family amidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00051</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63745.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00051"/>
    <dbReference type="EnsemblBacteria" id="CTQ63745">
        <property type="protein sequence ID" value="CTQ63745"/>
        <property type="gene ID" value="LAX5112_00051"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006807">
        <property type="term" value="P:nitrogen compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003010">
        <property type="entry name" value="C-N_Hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036526">
        <property type="entry name" value="C-N_Hydrolase_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00795">
        <property type="entry name" value="CN_hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56317">
        <property type="entry name" value="SSF56317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50263">
        <property type="entry name" value="CN_HYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CN hydrolase" evidence="1">
        <location>
            <begin position="21"/>
            <end position="280"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50263"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ63745.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="308" mass="32906" checksum="4B027214B8D3C659" modified="2015-12-09" version="1">MSAAWYSNGAGSMTEYPISLWSFNLGRAPKSVAALAGMIAEGLEKAASEGAKLLVLPEYLAETCLAFKPDGLRPDQEMGFLTDVGEDLFPMLSELPQKTGVSLLAGTWPVKTPRGITNTAVLLTVDGREIRQDKLSLTPFEQEEDIWHLVPGTELKVFELDGLKMAILICLDIEMPALSCLLAKEKVDLILVPSMTEKLSGYHRVFGCAKARAVELMCAVAACGVVGKAEGTTQNDTNVSGAALYLPCEEELEFEGVGAELQPTGGVGGEELFLTTSVPVGVIRALRDGGAEVWPGAWTAENVTLLKM</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZLW9</accession>
    <name>A0A0M6ZLW9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">NUDIX domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00052</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63748.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008188578.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ63748">
        <property type="protein sequence ID" value="CTQ63748"/>
        <property type="gene ID" value="LAX5112_00052"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015797">
        <property type="entry name" value="NUDIX_hydrolase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000086">
        <property type="entry name" value="NUDIX_hydrolase_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00293">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55811">
        <property type="entry name" value="SSF55811"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51462">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nudix hydrolase" evidence="1">
        <location>
            <begin position="25"/>
            <end position="158"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51462"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ63748.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="161" mass="18208" checksum="2C60ED1C6CC963C2" modified="2015-12-09" version="1">MAFAPTISAFDASWLRGLSGLFVKPARLQIAALCCRKGEREPEILLVSTRDTGRLILPKGWPEADMPAFETALLEAYEEAGVIGKADRRPLGSFRSYKGLASGLKLRTKVLVFKVEFESQVDNFPELGQRKRIWMTVSEAIEKADEPALRRFLKRHRNQLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZN97</accession>
    <name>A0A0M6ZN97_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Transglycosylase associated protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">LAX5112_00230</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the UPF0410 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64245.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670225.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00230"/>
    <dbReference type="EnsemblBacteria" id="CTQ64245">
        <property type="protein sequence ID" value="CTQ64245"/>
        <property type="gene ID" value="LAX5112_00230"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007341">
        <property type="entry name" value="Transgly_assoc"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04226">
        <property type="entry name" value="Transgly_assoc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="27"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="56"/>
            <end position="74"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011006"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ64245.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="79" mass="8185" checksum="801220713D9FB2DF" modified="2015-12-09" version="1">MGLIITIIIGLIAGAVAHRVLNSRGGFLGSLIVGLVGALIGGEFASILNLNVTGGVLDRLIIAVIGAILFLFVWKKVFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPP2</accession>
    <name>A0A0M6ZPP2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Acetyltransferase YpeA</fullName>
            <ecNumber evidence="2">2.3.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ypeA_1</name>
        <name evidence="2" type="ORF">LAX5112_00215</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.3.1.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64201.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670214.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00215"/>
    <dbReference type="EnsemblBacteria" id="CTQ64201">
        <property type="protein sequence ID" value="CTQ64201"/>
        <property type="gene ID" value="LAX5112_00215"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="7"/>
            <end position="145"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64201.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="145" mass="16450" checksum="10DA8CCD108F1C92" modified="2015-12-09" version="1">MPDADKSVIVLFEEQHRQDVIALWKKCGLVRAWNDPDKDIDRCLNVDDSRLFVLMKDQTVIGSVMTGYDGHRGAVYYLSVDPAHQGGGYGRKLMKQCEDYLTGLSCPKINLFVRKDNDAVHRFYGDMDYALETSAAFGKRLIPDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQB6</accession>
    <name>A0A0M6ZQB6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">General stress protein 69</fullName>
            <ecNumber evidence="2">1.1.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yhdN_2</name>
        <name evidence="2" type="ORF">LAX5112_00459</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.1.1.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64955.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670415.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00459"/>
    <dbReference type="EnsemblBacteria" id="CTQ64955">
        <property type="protein sequence ID" value="CTQ64955"/>
        <property type="gene ID" value="LAX5112_00459"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020471">
        <property type="entry name" value="AKR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023210">
        <property type="entry name" value="NADP_OxRdtase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036812">
        <property type="entry name" value="NADP_OxRdtase_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035959">
        <property type="entry name" value="RutC-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006175">
        <property type="entry name" value="YjgF/YER057c/UK114"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00248">
        <property type="entry name" value="Aldo_ket_red"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01042">
        <property type="entry name" value="Ribonuc_L-PSP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00069">
        <property type="entry name" value="ALDKETRDTASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51430">
        <property type="entry name" value="SSF51430"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55298">
        <property type="entry name" value="SSF55298"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aldo_ket_red" evidence="1">
        <location>
            <begin position="22"/>
            <end position="312"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00248"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64955.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="490" mass="53414" checksum="4ED46A194AA2D685" modified="2015-12-09" version="1">MTLHPPRQMLADDLEISRVLTGLWQIADIEKDGAELDPEKGADHLEAYLKAGFSTFDMADHYGSAEIISGRLLARHDGQDRPQVFTKWCPEPGPMTADVVRAGVQERLARLGTDCVDLLQFHWWSFGHPAWLDALHEMAKLKDEGLIKALGVTNFDAAHLRLALSDGIPLVSNQVSFSMVDRRALGPLSDLCAEREVRLLGYGTLCGGFLSDRWLGKPEPADITDWSKMKYKRFIDAAGGWDGFQAILKTANSIAQKHNVSLANVATRWVLEQPAVAGVIVGARLGESEHMADNAKLFSFALDEEDTAQLDAAFSQTTPVPGDCGDEYRRPPFLTASGDLSHHLSEMPRAHKAAPAPHRPDATHVLTGSDWEEIAGYCRAHRIGNRILVSGTTAVAWASRAVAPEDAAAQTTFILDKILAALSALGATANDVVRTRIFITDEADVFDISRAHGRVFSDIKPANTLVVVAGLIGDHKVEIEAEALLQNQDQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRF3</accession>
    <name>A0A0M6ZRF3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00599</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65359.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ65359">
        <property type="protein sequence ID" value="CTQ65359"/>
        <property type="gene ID" value="LAX5112_00599"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="22"/>
            <end position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65359.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="56" mass="6735" checksum="7F368D8CB01B967D" modified="2015-12-09" version="1">MRKTTRRKIKIMLNLFKRRQLTAQSGNSFDRRDPLAHPAIQRMSPRELADLPFNRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRW4</accession>
    <name>A0A0M6ZRW4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Energy-coupling factor transporter transmembrane protein NikQ</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">nikQ</name>
        <name evidence="7" type="ORF">LAX5112_00461</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the CbiQ family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64961.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670417.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00461"/>
    <dbReference type="EnsemblBacteria" id="CTQ64961">
        <property type="protein sequence ID" value="CTQ64961"/>
        <property type="gene ID" value="LAX5112_00461"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006824">
        <property type="term" value="P:cobalt ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003339">
        <property type="entry name" value="ABC/ECF_trnsptr_transmembrane"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012809">
        <property type="entry name" value="ECF_CbiQ"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02361">
        <property type="entry name" value="CbiQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02454">
        <property type="entry name" value="ECF_T_CbiQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="33"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="121"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="241"/>
            <end position="259"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008564"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ64961.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="265" mass="29035" checksum="6D13011655C8B407" modified="2015-12-09" version="1">MGHFVSSGPKILISADTAQSTRTLDGLDPRSRVLAALCFAILTVSLNSFPVLILAFGVSVATLLATRLPIKATLLRMAAMDGFIIFMLALLPFTVPGQPLFFVFGFGFSLEGLLKAAEIGLTANAVILMLMVLVGTLEPVTLGHALHRLKTPETLVHLLMFTVRYISVLHQEYLRLRSAMKVRSFRLSNSIHTYRTIGYLVGMMLVRSIDRSERILAAMKCRGFTGTIPLLDTMRFTSCDGVFAVCALFVGTALFILEWKIGAAY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRY6</accession>
    <name>A0A0M6ZRY6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Putative aliphatic sulfonates transport permease protein SsuC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ssuC_2</name>
        <name evidence="7" type="ORF">LAX5112_00669</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65539.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670617.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00669"/>
    <dbReference type="EnsemblBacteria" id="CTQ65539">
        <property type="protein sequence ID" value="CTQ65539"/>
        <property type="gene ID" value="LAX5112_00669"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="79"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="110"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="141"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="203"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="237"/>
            <end position="258"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="79"/>
            <end position="259"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ65539.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="273" mass="30125" checksum="075AB0E243C73853" modified="2015-12-09" version="1">MRLINRTPSRFAAVALGLLPFVATIVTYAIASHYRRLDNPADKLLPSLESMGQAFWRMAAVPDRRSGDLLLWIDTFDSLMRLGTGMAVSTLLAIFFGIGIGFIPHIRSALAPYIATFSLIPPITILPILFITFGLGEVSKIALIVIGTAPVMIRATAQAVLDIPREMIIKAETLGASVWQMITRLVLPQVLPKLITALRLGLVPAWIFLISAEAIASTTGLGYRIFLVRRYLAMDVILPYVVWITLMAFILDRLLLLLSKRAFRWNHMGGAAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSS6</accession>
    <name>A0A0M6ZSS6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Glucokinase</fullName>
            <ecNumber evidence="1">2.7.1.2</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="1">Glucose kinase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="1 3" type="primary">glk</name>
        <name evidence="3" type="ORF">LAX5112_00572</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + D-glucose = ADP + D-glucose 6-phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17825"/>
            <dbReference type="ChEBI" id="CHEBI:4167"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61548"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.1.2"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the bacterial glucokinase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.2" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65281.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670501.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00572"/>
    <dbReference type="EnsemblBacteria" id="CTQ65281">
        <property type="protein sequence ID" value="CTQ65281"/>
        <property type="gene ID" value="LAX5112_00572"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004340">
        <property type="term" value="F:glucokinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005536">
        <property type="term" value="F:glucose binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006096">
        <property type="term" value="P:glycolytic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00524">
        <property type="entry name" value="Glucokinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003836">
        <property type="entry name" value="Glucokinase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02685">
        <property type="entry name" value="Glucokinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="SSF53067"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00749">
        <property type="entry name" value="glk"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="1" id="KW-0324">Glycolysis</keyword>
    <keyword evidence="1 3" id="KW-0418">Kinase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 3" id="KW-0808">Transferase</keyword>
    <feature type="binding site" evidence="1">
        <location>
            <begin position="16"/>
            <end position="21"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00524"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU004046"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ65281.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="345" mass="36931" checksum="02A6B28688B47A59" modified="2015-12-09" version="1">MTFQSQAPFSYPVLVADIGGTNARFAMVENETAPTRMCGKTATADHADISSAIRQTVLPSTSENPRTAIIAVAGPVTGDTIPLTNAAWVIEPLRMISDLGVDRVIVLNDFEAQALALPGYQGADIEQVGKGEARPNATKFVLGPGTGLGAASMIYAADTWVPVPGEGGHVELGPVTPEDFEIWPFIIKRNGRIGAEEVLSGTGLPRLARAVSTWMDMTRDFTTPAMITKAAEENDPVALKTLQVFARALGRVAGDFALTTLARGGVYLTGGITPRIPQFLTDGNFRAAFEAKAPHEQLMHKIPTFIVRHSDPALEGLAAYARQPEQFAVDRRGREWMLNPATIPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZT76</accession>
    <name>A0A0M6ZT76_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Phosphate-import permease protein PhnE</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">phnE_1</name>
        <name evidence="7" type="ORF">LAX5112_00616</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65426.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670572.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00616"/>
    <dbReference type="EnsemblBacteria" id="CTQ65426">
        <property type="protein sequence ID" value="CTQ65426"/>
        <property type="gene ID" value="LAX5112_00616"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015416">
        <property type="term" value="F:ABC-type phosphonate transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005769">
        <property type="entry name" value="PhnE/PtxC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01097">
        <property type="entry name" value="PhnE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="79"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="127"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="242"/>
            <end position="261"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="75"/>
            <end position="258"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ65426.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="266" mass="28058" checksum="B2DAA42F6F070219" modified="2015-12-09" version="1">MSGVAPDFRSRFSGMSSINFVLIIVVAAIILSSINSVAPSVGQLANGLPSMVNLLDRMWPPNTEASFLTRVGMRLVETFQIALAGAAIGIALSLPIGWLAAKKVSPIGPASWLVKAIISLLRTIPDLVWALLFVVTVGLGAVAGTMTIVVDTIGFCGRFFAEAMEDADKEPQEALSAIGANKVSILMAGILPDAAPSMINTALFALEKAVRSSVVLGLVGAGGIGQELKAAFDLFQYKNASAIILVIFVIVLVMEFITDWLRTKLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="32" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTV8</accession>
    <name>A0A0M6ZTV8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6 13">5-aminolevulinate synthase</fullName>
            <ecNumber evidence="6 13">2.3.1.37</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9 13">5-aminolevulinic acid synthase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="10 13">Delta-ALA synthase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="11 13">Delta-aminolevulinate synthase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="15" type="primary">hemA_1</name>
        <name evidence="15" type="ORF">LAX5112_00913</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 13">
            <text>glycine + H(+) + succinyl-CoA = 5-aminolevulinate + CO2 + CoA</text>
            <dbReference type="Rhea" id="RHEA:12921"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57292"/>
            <dbReference type="ChEBI" id="CHEBI:57305"/>
            <dbReference type="ChEBI" id="CHEBI:356416"/>
            <dbReference type="EC" id="2.3.1.37"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 12">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="3 13">Porphyrin-containing compound metabolism; protoporphyrin-IX biosynthesis; 5-aminolevulinate from glycine: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4 12">Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.37" evidence="6 13"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66219.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670798.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00913"/>
    <dbReference type="EnsemblBacteria" id="CTQ66219">
        <property type="protein sequence ID" value="CTQ66219"/>
        <property type="gene ID" value="LAX5112_00913"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00251">
        <property type="reaction ID" value="UER00375"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003870">
        <property type="term" value="F:5-aminolevulinate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006782">
        <property type="term" value="P:protoporphyrinogen IX biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010961">
        <property type="entry name" value="4pyrrol_synth_NH2levulA_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001917">
        <property type="entry name" value="Aminotrans_II_pyridoxalP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004839">
        <property type="entry name" value="Aminotransferase_I/II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00155">
        <property type="entry name" value="Aminotran_1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01821">
        <property type="entry name" value="5aminolev_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00599">
        <property type="entry name" value="AA_TRANSFER_CLASS_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 13 15" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="7 13" id="KW-0350">Heme biosynthesis</keyword>
    <keyword evidence="12" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="13 15" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Aminotran_1_2" evidence="14">
        <location>
            <begin position="47"/>
            <end position="391"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001588"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005029"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00008392"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00013257"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023133"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00031691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00031945"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00032773"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU003693"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU910713"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF00155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="CTQ66219.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="405" mass="44085" checksum="00B59DE0A3C360C9" modified="2015-12-09" version="1">MDVNAYLEDRLSKLHDNGNYRVFADLERHSGDFPKATRYREDGSTQEVTVWCSNDYLGMGQHEKVTNAMQDVLSKCGAGAGGTRNISGTNHYHVLLEKELADLHAKDAALIFTSGYVSNWAALGTLASEVPGMIVYSDALNHASMIEGIRHARCEKRIFKHNDVADLERLMAADDPNAPKLVAFESVYSMDGDIAPIEEICDVADKFGAMTYLDEVHAVGMYGPRGGGVAEQEGLMDRLTIIEGTLGKAFGVMGGYITGSKTVVDFIRSFASGFIFTTALPPALAAGAAASIKHLKASPFERKAHKDRVAQVRAALDKSGIPHMDNPSHIVPVMVGDAKKCKWISDILLDTYGIYVQPINYPTVPVGTERLRFTPTPLHTADDIERLVNAINDLWSQCALARAVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZU85</accession>
    <name>A0A0M6ZU85_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Glutamine--fructose-6-phosphate aminotransferase [isomerizing]</fullName>
            <ecNumber evidence="3">2.6.1.16</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">glmS</name>
        <name evidence="3" type="ORF">LAX5112_00705</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.6.1.16" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65640.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00705"/>
    <dbReference type="EnsemblBacteria" id="CTQ65640">
        <property type="protein sequence ID" value="CTQ65640"/>
        <property type="gene ID" value="LAX5112_00705"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0097367">
        <property type="term" value="F:carbohydrate derivative binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004360">
        <property type="term" value="F:glutamine-fructose-6-phosphate transaminase (isomerizing) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901135">
        <property type="term" value="P:carbohydrate derivative metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd05008">
        <property type="entry name" value="SIS_GlmS_GlmD_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd05009">
        <property type="entry name" value="SIS_GlmS_GlmD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035466">
        <property type="entry name" value="GlmS/AgaS_SIS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035490">
        <property type="entry name" value="GlmS/FrlB_SIS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001347">
        <property type="entry name" value="SIS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046348">
        <property type="entry name" value="SIS_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01380">
        <property type="entry name" value="SIS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53697">
        <property type="entry name" value="SSF53697"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51464">
        <property type="entry name" value="SIS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="SIS" evidence="2">
        <location>
            <begin position="49"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="domain" description="SIS" evidence="2">
        <location>
            <begin position="212"/>
            <end position="348"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ65640.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="358" mass="37569" checksum="08417BF1D3784F96" modified="2015-12-09" version="1">MTLLQSSGYLIGEDPRVTSSLTKMKQEIAEIPSAVDRLLTSGNADISRISAELRSSDLRCLLSVARGSSDHACTYLKYAAELLLGLPMASVGPSLASVYGASLKADGMLCFSVSQSGKSPDITRMTRSLTKSGATTLAITNHPGSPLSEAASATVPIHAGPELSVAATKTFVTSLVAGLWLLAELKADAGLLAAIRNLPAHLEDAVACDWREAAPEKDIGSLFTLGRGPSWAVSNEAALKFKETCQIHAESYSSAEVLHGPVSIVSQGFPVIAFAAADAAEQAVVDVADKLSQMGATVFVNSDKAHRANVLPIVRTDHWLTDPIASIVSFYGLVEHVAGLQGINPDAPRHLNKVTETV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUB5</accession>
    <name>A0A0M6ZUB5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase</fullName>
            <ecNumber evidence="1">1.1.1.127</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">kduD_1</name>
        <name evidence="1" type="ORF">LAX5112_00490</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.1.1.127" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65043.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670441.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00490"/>
    <dbReference type="EnsemblBacteria" id="CTQ65043">
        <property type="protein sequence ID" value="CTQ65043"/>
        <property type="gene ID" value="LAX5112_00490"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047001">
        <property type="term" value="F:2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ65043.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="254" mass="26465" checksum="C1CAFD6124102D19" modified="2015-12-09" version="1">MALTIDLSGKTALVTGASRGIGTAISKGLAKAGANVVGIGTTIETGVPDLKAEFNTYGVRFTPINCDLSSRDQISGLVKRLARDQVQIDILVNNAGIIRRTEAASHAVEDWDAVMAVNLDAAFLLSRDFGGKMVERGSGKIINIASVLSFQGGILVPGYAAAKGAIAQLTRSIANEWASKGVNVNAVAPGYIATDNTAALQADEKRTADLMARVPAGRWGTPKDIASPVTFLASDHARFIHGAVLPVDGGWLAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUL1</accession>
    <name>A0A0M6ZUL1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">1,2-phenylacetyl-CoA monooxygenase, subunit C</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">paaC</name>
        <name evidence="1" type="ORF">LAX5112_00798</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65906.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670714.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00798"/>
    <dbReference type="EnsemblBacteria" id="CTQ65906">
        <property type="protein sequence ID" value="CTQ65906"/>
        <property type="gene ID" value="LAX5112_00798"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004497">
        <property type="term" value="F:monooxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010124">
        <property type="term" value="P:phenylacetate catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1260.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012347">
        <property type="entry name" value="Ferritin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009078">
        <property type="entry name" value="Ferritin-like_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007814">
        <property type="entry name" value="PaaA_PaaC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011882">
        <property type="entry name" value="PaaC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05138">
        <property type="entry name" value="PaaA_PaaC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF037834">
        <property type="entry name" value="PA_CoA_Oase3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47240">
        <property type="entry name" value="SSF47240"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02158">
        <property type="entry name" value="PA_CoA_Oxy3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0503">Monooxygenase</keyword>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ65906.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="272" mass="29882" checksum="5D06DF3B774BC678" modified="2015-12-09" version="1">MSDQTVASGAAHDSFVSDAALKPAFFEWLCRMGDNALVLGHRTSEWCGHGPVLEEDIALANTALDLIGHTQMWLGLAGEVEGEGRDADKLAYLRDAFKFRNVLLVELPKGDMAVTVMREFLFDAYHHLLLSWLAENSKSPRVAEIAAKALKEVSYHLERASDLVVRLGDGTAESHRRMQDALDLLWPYTGEMFEGDALDAAVADAGIAPKPEDLKAGWEASVREILDEAKLKAPEAAGFVHKGGKQGRHTEHLGFILAEMQFLQRAYPGASW</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUR2</accession>
    <name>A0A0M6ZUR2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Bacteriophytochrome cph2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">cph2_3</name>
        <name evidence="5" type="ORF">LAX5112_00996</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66515.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670903.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00996"/>
    <dbReference type="EnsemblBacteria" id="CTQ66515">
        <property type="protein sequence ID" value="CTQ66515"/>
        <property type="gene ID" value="LAX5112_00996"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd01948">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01949">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00130">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.450">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001633">
        <property type="entry name" value="EAL_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035919">
        <property type="entry name" value="EAL_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000160">
        <property type="entry name" value="GGDEF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001610">
        <property type="entry name" value="PAC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000014">
        <property type="entry name" value="PAS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000700">
        <property type="entry name" value="PAS-assoc_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035965">
        <property type="entry name" value="PAS-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013655">
        <property type="entry name" value="PAS_fold_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00563">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00990">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08447">
        <property type="entry name" value="PAS_3"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00052">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00267">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00086">
        <property type="entry name" value="PAC"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00091">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141868">
        <property type="entry name" value="SSF141868"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55785">
        <property type="entry name" value="SSF55785"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00254">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00229">
        <property type="entry name" value="sensory_box"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50883">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50887">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50113">
        <property type="entry name" value="PAC"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50112">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PAS" evidence="1">
        <location>
            <begin position="36"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="domain" description="PAC" evidence="2">
        <location>
            <begin position="96"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="domain" description="PAS" evidence="1">
        <location>
            <begin position="167"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="domain" description="PAC" evidence="2">
        <location>
            <begin position="242"/>
            <end position="294"/>
        </location>
    </feature>
    <feature type="domain" description="GGDEF" evidence="4">
        <location>
            <begin position="326"/>
            <end position="460"/>
        </location>
    </feature>
    <feature type="domain" description="EAL" evidence="3">
        <location>
            <begin position="469"/>
            <end position="724"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50112"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50113"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ66515.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="724" mass="81298" checksum="34E9300A446EBA55" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZV57</accession>
    <name>A0A0M6ZV57_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Putative aminopeptidase YsdC</fullName>
            <ecNumber evidence="9">3.4.11.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">ysdC</name>
        <name evidence="9" type="ORF">LAX5112_00594</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="8">
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </cofactor>
        <text evidence="8">Binds 2 divalent metal cations per subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the peptidase M42 family.</text>
    </comment>
    <dbReference type="EC" id="3.4.11.-" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65343.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670521.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00594"/>
    <dbReference type="EnsemblBacteria" id="CTQ65343">
        <property type="protein sequence ID" value="CTQ65343"/>
        <property type="gene ID" value="LAX5112_00594"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004177">
        <property type="term" value="F:aminopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.30.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008007">
        <property type="entry name" value="Peptidase_M42"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023367">
        <property type="entry name" value="Peptidase_M42_dom2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05343">
        <property type="entry name" value="Peptidase_M42"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001123">
        <property type="entry name" value="PepA_GA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 9" id="KW-0031">Aminopeptidase</keyword>
    <keyword evidence="5 9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4 8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3" id="KW-0645">Protease</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" description="Proton acceptor" evidence="7">
        <location>
            <position position="211"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="68"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="179"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="212"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="234"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="322"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
            <label>2</label>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006272"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRNR" id="PIRNR001123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR001123-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR001123-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ65343.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="347" mass="37744" checksum="9E33C5AF42521AB0" modified="2015-12-09" version="1">MNIDLLRRLCETPGVPGHEHRVRDLIKSEIEGLFDEVTTDPMGSLLCRRNSRKKPKKGDPKKVMLLCHMDEIGFLVSHVTDKGFVHVQPVGGFDARNLFSRRVLVSTDDGDYKGVMNPGGKPIHISSPEERKKVPEPKDFVVDLGLGDSTKDLIKVGDMVTMDEPMIEIGEKVVSKALDNRIACWLGIEAIKALGKSKHECEIHVAFTCQEEVGLRGARTASFAIKPDIGLGIDVTLACDTPGVPEQDRTTVQGEGFGLHVKDSSFIADRDLVKEIEALAQKEEISYQRTMLAAGGQDGAAAQQAAAGAKAVGIVVGTRYIHTVTEMIHKSDLQAALDILAAYLKKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVG4</accession>
    <name>A0A0M6ZVG4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glyoxalase-like domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01086</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66769.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670954.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01086"/>
    <dbReference type="EnsemblBacteria" id="CTQ66769">
        <property type="protein sequence ID" value="CTQ66769"/>
        <property type="gene ID" value="LAX5112_01086"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.180.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029068">
        <property type="entry name" value="Glyas_Bleomycin-R_OHBP_Dase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004360">
        <property type="entry name" value="Glyas_Fos-R_dOase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037523">
        <property type="entry name" value="VOC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00903">
        <property type="entry name" value="Glyoxalase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54593">
        <property type="entry name" value="SSF54593"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51819">
        <property type="entry name" value="VOC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="VOC" evidence="1">
        <location>
            <begin position="4"/>
            <end position="115"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51819"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66769.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="120" mass="13133" checksum="9A56C65DB7D0B36B" modified="2015-12-09" version="1">MTYLLNRLTLYVRDVEAVAEFYCRHFGYTARPADGGLIELHSLDEGCQLLLHPLAKGRKAGQTLVKLVFQVEDVVSEKSVLAKKGLEFGPIHHGNGYQFANTKDPAGNAVSISNRVFGGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVW5</accession>
    <name>A0A0M6ZVW5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Ribose-5-phosphate isomerase A</fullName>
            <ecNumber evidence="2">5.3.1.6</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="2">Phosphoriboisomerase A</fullName>
            <shortName evidence="2">PRI</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="2 3" type="primary">rpiA</name>
        <name evidence="3" type="ORF">LAX5112_00964</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>aldehydo-D-ribose 5-phosphate = D-ribulose 5-phosphate</text>
            <dbReference type="Rhea" id="RHEA:14657"/>
            <dbReference type="ChEBI" id="CHEBI:58121"/>
            <dbReference type="ChEBI" id="CHEBI:58273"/>
            <dbReference type="EC" id="5.3.1.6"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Carbohydrate degradation; pentose phosphate pathway; D-ribose 5-phosphate from D-ribulose 5-phosphate (non-oxidative stage): step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ribose 5-phosphate isomerase family.</text>
    </comment>
    <dbReference type="EC" id="5.3.1.6" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66427.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670882.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00964"/>
    <dbReference type="EnsemblBacteria" id="CTQ66427">
        <property type="protein sequence ID" value="CTQ66427"/>
        <property type="gene ID" value="LAX5112_00964"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00115">
        <property type="reaction ID" value="UER00412"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004751">
        <property type="term" value="F:ribose-5-phosphate isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009052">
        <property type="term" value="P:pentose-phosphate shunt, non-oxidative branch"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01398">
        <property type="entry name" value="RPI_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00170">
        <property type="entry name" value="Rib_5P_isom_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037171">
        <property type="entry name" value="NagB/RpiA_transferase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020672">
        <property type="entry name" value="Ribose5P_isomerase_typA_subgr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004788">
        <property type="entry name" value="Ribose5P_isomerase_type_A"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06026">
        <property type="entry name" value="Rib_5-P_isom_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100950">
        <property type="entry name" value="SSF100950"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00021">
        <property type="entry name" value="rpiA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 2 3" id="KW-0413">Isomerase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Substrate binding" evidence="2">
        <location>
            <begin position="27"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="2">
        <location>
            <begin position="82"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="2">
        <location>
            <begin position="95"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="2">
        <location>
            <position position="104"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="122"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ66427.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="232" mass="24372" checksum="BC0B06184689F4CA" modified="2015-12-09" version="1">MSDNLKQQAAERAAEDVTSGMRLGIGTGSTAEFFVHALAKRVADGLDVIGVPTSERTAELAASLGIKLTTLEELPELDLTVDGADELDANLALIKGGGGALLREKIVAAASGKMIVIADGTKNVDTLGQFPLPIEVVPFGQEATRRAILALLREMGLPQNLQLRMAGEHPFVTDGGHHIFDAHLLKIEDPETLAQALVKIPGVVEHGLFLNLASKAYVAGEDGVKTITPASI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVY5</accession>
    <name>A0A0M6ZVY5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">D-inositol 3-phosphate glycosyltransferase</fullName>
            <ecNumber evidence="3">2.4.1.250</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">mshA_1</name>
        <name evidence="3" type="ORF">LAX5112_00720</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.4.1.250" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65684.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670655.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00720"/>
    <dbReference type="EnsemblBacteria" id="CTQ65684">
        <property type="protein sequence ID" value="CTQ65684"/>
        <property type="gene ID" value="LAX5112_00720"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102710">
        <property type="term" value="F:D-inositol-3-phosphate glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001296">
        <property type="entry name" value="Glyco_trans_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028098">
        <property type="entry name" value="Glyco_trans_4-like_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13439">
        <property type="entry name" value="Glyco_transf_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00534">
        <property type="entry name" value="Glycos_transf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glyco_trans_4-like_N" evidence="2">
        <location>
            <begin position="17"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="domain" description="Glycos_transf_1" evidence="1">
        <location>
            <begin position="179"/>
            <end position="339"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00534"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13439"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ65684.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="378" mass="41300" checksum="8CFBC845C9CAC5F5" modified="2015-12-09" version="1">MSGQRILFVQTQAENAGAQEVSRLLGEHLTNRGHTVRHLFFYKKSEDFSAPPDTIIVRQTRPSKWRFFSFLGELYKAIRDFKPDCVFCFQHFGNVIGAPVARLAGCPFIVANQVTAPSLINPVVALLDKGLGMAGIYDRVTVNSNFLLDTYGRYPIRYVSRLDFIPQGFETKDCAMDIASAREELGLPNGVPLLGVSARLNPAKQIDKVLAILATQPEWHFAIAGQGPDFTRLQNEAAKLEITNRVHFLGEFAPSQIGEFLACLDVFTFPSAAESFGLAAIEAAQAGVPVVANDLPVLQEVLQANGKPCALFVDVMDPEAFASAIATVLNKPKVAQTLRDRSGDLKERYSLKAMVDAYEALATGKDPAADKHQVMAVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWK4</accession>
    <name>A0A0M6ZWK4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">1,2-phenylacetyl-CoA monooxygenase, subunit D</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">paaD</name>
        <name evidence="2" type="ORF">LAX5112_00797</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65904.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008197396.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00797"/>
    <dbReference type="EnsemblBacteria" id="CTQ65904">
        <property type="protein sequence ID" value="CTQ65904"/>
        <property type="gene ID" value="LAX5112_00797"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004497">
        <property type="term" value="F:monooxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.130">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034904">
        <property type="entry name" value="FSCA_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002744">
        <property type="entry name" value="MIP18-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011883">
        <property type="entry name" value="PA_CoA_Oase4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01883">
        <property type="entry name" value="FeS_assembly_P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF117916">
        <property type="entry name" value="SSF117916"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02159">
        <property type="entry name" value="PA_CoA_Oxy4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0503">Monooxygenase</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FeS_assembly_P" evidence="1">
        <location>
            <begin position="10"/>
            <end position="78"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65904.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="173" mass="19024" checksum="E2CB32BC36C9AEDE" modified="2015-12-09" version="1">MSAPQTTPTEQVWDWLAEVPDPEIPVVSVTELGIIRDVQYDGDTLVVAVTPTYSGCPATAVIDLMIEDKLREKGMENVRLERRLSPPWTTDWVTPEAREKLKQFGIAPPIDGTAADGMGAKAARLSGQTNLVVPCPRCGSAHTERVSQFGSTPCKAAWRCKDCLEPFDYFKCI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWQ0</accession>
    <name>A0A0M6ZWQ0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01256</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67188.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671091.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67188">
        <property type="protein sequence ID" value="CTQ67188"/>
        <property type="gene ID" value="LAX5112_01256"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67188.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="192" mass="21461" checksum="3129B2FA14D6A4E2" modified="2015-12-09" version="1">MKIAGLDVATNTGWCIAEGQSFETGLFRNKPKSNCKITREAERNYNFRRWLWGFLKIKEIEFVAIEERIKGEMTKTEVDRFGRKSKKSISNDSAKATAAYLNGCAQEVCFSLSIPFVLVPVQTWRAAFNGGQKPDLGEDQKDVTRRICEMMKIDVKSKDAADAAGIAFWAQIHTKTERLQGAAGPLFEGEAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZX30</accession>
    <name>A0A0M6ZX30_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Putative glycosyl transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01320</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67305.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01320"/>
    <dbReference type="EnsemblBacteria" id="CTQ67305">
        <property type="protein sequence ID" value="CTQ67305"/>
        <property type="gene ID" value="LAX5112_01320"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011330">
        <property type="entry name" value="Glyco_hydro/deAcase_b/a-brl"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88713">
        <property type="entry name" value="SSF88713"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67305.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="270" mass="30639" checksum="B6322AA51C8B0D38" modified="2015-12-09" version="1">MTAPSTPGDLDRFKASLTTHLDWFADRGRKVRFWWRDDDAIEPTPQLEKLLSLANNHDVDVALAVIPKQATSALADRLKDERHAPVLQHGWQHKNFQRKDLGERAAELGFRRDLEELGAQLTEGKAKLDELFGEKFIPAIVPPWNRIAPDVSRALPGLGLPGLSTFTWHNFPKAHQVQCHVDIIKWKKQVRFIGWGSALRKFDLELCRRRTNPDEPLGLLTHHLVHDVGCWEFLQEFLTIAAHHPGAEWPEVKDLFGCARVAEPSKSTAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZX71</accession>
    <name>A0A0M6ZX71_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Secreted protein hcp</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">hcpA_1</name>
        <name evidence="1" type="ORF">LAX5112_01120</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66861.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451785.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01120"/>
    <dbReference type="EnsemblBacteria" id="CTQ66861">
        <property type="protein sequence ID" value="CTQ66861"/>
        <property type="gene ID" value="LAX5112_01120"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.110.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036624">
        <property type="entry name" value="Hcp1-lik_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008514">
        <property type="entry name" value="T6SS_Hcp"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05638">
        <property type="entry name" value="T6SS_HCP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141452">
        <property type="entry name" value="SSF141452"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03344">
        <property type="entry name" value="VI_effect_Hcp1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ66861.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="170" mass="18789" checksum="A834C968E87CFF1B" modified="2015-12-09" version="1">MANVAYMTISGSTQGEITSDATTADSIGNNWQEGHEGESLIYKFESNAIVPRDPNSGTAIGTRRHQPTTIIKPLDKASPLMWQALATGESLEITVNFWRTSTSGVQEHYYTIKYTDAVLVEGKTILPDVLDDANSSRGDQEQWSFTYRKAEWTHEKAGTSASDDWRAPVT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZX78</accession>
    <name>A0A0M6ZX78_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Cytochrome c-type biogenesis protein CcmF</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">ccmF</name>
        <name evidence="10" type="ORF">LAX5112_01360</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the CcmF/CycK/Ccl1/NrfE/CcsA family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67378.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671168.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01360"/>
    <dbReference type="EnsemblBacteria" id="CTQ67378">
        <property type="protein sequence ID" value="CTQ67378"/>
        <property type="gene ID" value="LAX5112_01360"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015232">
        <property type="term" value="F:heme transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017004">
        <property type="term" value="P:cytochrome complex assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032523">
        <property type="entry name" value="CcmF_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002541">
        <property type="entry name" value="Cyt_c_assembly"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003567">
        <property type="entry name" value="Cyt_c_biogenesis"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003568">
        <property type="entry name" value="Cyt_c_biogenesis_CcmF"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43653">
        <property type="entry name" value="PTHR43653"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16327">
        <property type="entry name" value="CcmF_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01578">
        <property type="entry name" value="Cytochrom_C_asm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01410">
        <property type="entry name" value="CCBIOGENESIS"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01411">
        <property type="entry name" value="CCMFBIOGNSIS"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00353">
        <property type="entry name" value="nrfE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6" id="KW-0201">Cytochrome c-type biogenesis</keyword>
    <keyword evidence="7" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="6"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="38"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="96"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="126"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="177"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="209"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="249"/>
            <end position="266"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="273"/>
            <end position="292"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="312"/>
            <end position="331"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="352"/>
            <end position="374"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="394"/>
            <end position="413"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="425"/>
            <end position="443"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="449"/>
            <end position="470"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="491"/>
            <end position="516"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="618"/>
            <end position="638"/>
        </location>
    </feature>
    <feature type="domain" description="Cytochrom_C_asm" evidence="8">
        <location>
            <begin position="89"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="domain" description="CcmF_C" evidence="9">
        <location>
            <begin position="315"/>
            <end position="640"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022519"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022748"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF01578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF16327"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ67378.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="662" mass="71698" checksum="A883C95924A7E2F2" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXH3</accession>
    <name>A0A0M6ZXH3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Neu5Ac permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">siaT_10</name>
        <name evidence="5" type="ORF">LAX5112_01166</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66981.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008196638.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01166"/>
    <dbReference type="EnsemblBacteria" id="CTQ66981">
        <property type="protein sequence ID" value="CTQ66981"/>
        <property type="gene ID" value="LAX5112_01166"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010656">
        <property type="entry name" value="DctM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004681">
        <property type="entry name" value="TRAP_DctM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33362">
        <property type="entry name" value="PTHR33362"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06808">
        <property type="entry name" value="DctM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006066">
        <property type="entry name" value="HI0050"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00786">
        <property type="entry name" value="dctM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="6"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="59"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="99"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="175"/>
            <end position="199"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="220"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="248"/>
            <end position="267"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="287"/>
            <end position="309"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="329"/>
            <end position="352"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
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            <end position="387"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="407"/>
            <end position="429"/>
        </location>
    </feature>
    <feature type="domain" description="DctM" evidence="4">
        <location>
            <begin position="15"/>
            <end position="424"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF06808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ66981.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="438" mass="46380" checksum="BC8FCD5F4072AED6" modified="2015-12-09" version="1">MDPLLLGALVAFFTIFVLFSGVSVALGLLIVSAGFLIIFDGMRSLELMPEILFGKLDNFALLSIPMFIIMGASIASTRAGADLYEALERWLTRVPGGLVVSNLGACALFAAMSGSSPATCAAIGKMGIPEMRKRGYPDGVAAGSIAAGGTLGILIPPSVTMIVYGIATETSIGRLFLAGVIPGLLLVGLFMAWSLYSTWRSGDASVLSAGSYTWKERFEILPRVLPFLAIIVGVLYAMYGGIATPSETAAVGALMCLVIAMVIYKLWNPGDLWVVLRDSTKESVMILFIIAAAGVFSYMLSSLFITQAIAEWIGTLDVNRWVLMGAVNIFLLIAGFFLPPVAVILMAAPILLPIITTAGFDPIWFAVVLTINMEIGLISPPVGLNLYVINGIAPDISLKTILKGSLPFVGCMVVAIILLCLFPGLATWLPDAVMGPTR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZY15</accession>
    <name>A0A0M6ZY15_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01255</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67187.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671090.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67187">
        <property type="protein sequence ID" value="CTQ67187"/>
        <property type="gene ID" value="LAX5112_01255"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67187.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="80" mass="8792" checksum="22BC65A901C45EA6" modified="2015-12-09" version="1">MTKPLSQYSSRELQQFSEVIAKAADLREQSAIALETLVKSGQVSKSQQITAICYRHEAWIMAEAAQIFDSMAATKSKVAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZY68</accession>
    <name>A0A0M6ZY68_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">L-cystine-binding protein TcyA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">tcyA_1</name>
        <name evidence="5" type="ORF">LAX5112_01286</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the bacterial solute-binding protein 3 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67241.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671116.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01286"/>
    <dbReference type="EnsemblBacteria" id="CTQ67241">
        <property type="protein sequence ID" value="CTQ67241"/>
        <property type="gene ID" value="LAX5112_01286"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018313">
        <property type="entry name" value="SBP_3_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00062">
        <property type="entry name" value="PBPb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01039">
        <property type="entry name" value="SBP_BACTERIAL_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="domain" description="PBPb" evidence="4">
        <location>
            <begin position="28"/>
            <end position="251"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010333"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU003744"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00062"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ67241.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="252" mass="28227" checksum="514E58F5B5A2EFC4" modified="2015-12-09" version="1">MYIRNAVGLVVIGLTLFGASTKPLHADAIRAATDEWPPFRILTDEGFTGLDLDLIHEVGKRIGTEIDVVRMPWGRGLASMQTGAVDVMTGLAYRKERAEYIAYTDTPYYACETAFYTPASRPVSIASYEDLQEHAVGFVLHSAYFEQFDQDTTLDKLGVAAENILIDMTKRGRLDVMIGTDCQVDYYLKTQGLGDRIVKTEYRPGNTVNLFLGVSRQSEWAERVEELNTIVKDLVDEGVVDGFARRYYDNPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYF2</accession>
    <name>A0A0M6ZYF2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01283</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67236.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67236">
        <property type="protein sequence ID" value="CTQ67236"/>
        <property type="gene ID" value="LAX5112_01283"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67236.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="40" mass="5088" checksum="FE4E0B2A366BD1E6" modified="2015-12-09" version="1">MRYETHRRDRNLTEFGRILQLWMDFSELGTIRFTLRRQPF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZ87</accession>
    <name>A0A0M6ZZ87_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Homoserine/homoserine lactone efflux protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">rhtB_2</name>
        <name evidence="6" type="ORF">LAX5112_01114</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66844.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670975.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01114"/>
    <dbReference type="EnsemblBacteria" id="CTQ66844">
        <property type="protein sequence ID" value="CTQ66844"/>
        <property type="gene ID" value="LAX5112_01114"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006865">
        <property type="term" value="P:amino acid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001123">
        <property type="entry name" value="LeuE-type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30086">
        <property type="entry name" value="PTHR30086"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01810">
        <property type="entry name" value="LysE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006324">
        <property type="entry name" value="LeuE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="6"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="41"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="72"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="112"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="149"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="187"/>
            <end position="205"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ66844.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="208" mass="21601" checksum="87F25AD49D793EE7" modified="2015-12-09" version="1">MIPLDVLGVFFVAAIALGLAPGPDNIFVLTQSALYGRLAGLVVTLGLCTGLIFHSAAVALGVAAIFQTSALAFTLLKFAGAAYLVYLAVQAFRAGTSKINGNSAPEMSLPALYLRGIIMNVTNPKVAIFFLAFLPQFADPARGSVPFQILIFGGLFIVATILVFGAVALGAGSLGGYLKRSPSAQVWLNRLAGVVFVGLAVRLAISER</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZA9</accession>
    <name>A0A0M6ZZA9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Glutathione transport system permease protein GsiC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">gsiC_2</name>
        <name evidence="8" type="ORF">LAX5112_01408</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="6">Cell membrane</location>
            <topology evidence="6">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67512.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008194311.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01408"/>
    <dbReference type="EnsemblBacteria" id="CTQ67512">
        <property type="protein sequence ID" value="CTQ67512"/>
        <property type="gene ID" value="LAX5112_01408"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045621">
        <property type="entry name" value="BPD_transp_1_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19300">
        <property type="entry name" value="BPD_transp_1_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="104"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="138"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="180"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="238"/>
            <end position="264"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="284"/>
            <end position="309"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="7">
        <location>
            <begin position="98"/>
            <end position="303"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ67512.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="318" mass="34210" checksum="7FB83FCE87F9E8B6" modified="2015-12-09" version="1">MGDILQLVLKRLGLGLVTLLVVSILIFFAVELLPGDIAQAVLGQGATPETVAALRDKLGLDQPAIFRYFQWLGGALTGDFGVSLVSGVSVGDAIGERFVNTLFLATYAAVIAVPISIILGVIVALLRNTLFDRVANVATLTSISSPEFFLGYILILYLAVKTQYFPAIASISPDMTFGELLHRTFLPALTLVLVVTAHMMRMTRAAIINLLASPYIEMARLKGVPPWKIIVKHALPNAWAPIINVVALNLAYLITGVVLVEVVFVYPGIGQLLVDAVAKRDFPIVQACCLIFAATFILLNLAADVGAILTNPRLRHPK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZM7</accession>
    <name>A0A0M6ZZM7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative GTPase/MT1543</fullName>
            <ecNumber evidence="2">3.6.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01477</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the SIMIBI class G3E GTPase family. ArgK/MeaB subfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.-.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67676.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671447.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01477"/>
    <dbReference type="EnsemblBacteria" id="CTQ67676">
        <property type="protein sequence ID" value="CTQ67676"/>
        <property type="gene ID" value="LAX5112_01477"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005129">
        <property type="entry name" value="GTPase_ArgK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23408">
        <property type="entry name" value="PTHR23408"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009625"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67676.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="316" mass="33330" checksum="FCE90E502B8AAE5E" modified="2015-12-09" version="1">MPEPFPDVDALRSGGKRVLSRVLTRIETDTDKPETAAFLDRIAAQAKGHVLGLTGPPGVGKSTLTDALIRAFRDAGGGVAVLAVDPSSAITGGALLGDRTRLKTDPNDDQIFVRSMAARDRLGGLSDHSVAAIAVLRAAFDHVIVETVGIGQSEGDLKQAADTVLLCIQPGSGDSLQFMKAGIMELPDVVAVTKADMGAAARRAAADVKGALTLSPTGSKNWIVPVGLVSSQTGEGMEALIDQVKAHLDYLQTNGRLAARRASQHSAWFRDRVLSEYGQSGLRICQDLAEGQARHAPFSCFFEFSEKMDACLPPVT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZV4</accession>
    <name>A0A0M6ZZV4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01210</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67093.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671049.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01210"/>
    <dbReference type="EnsemblBacteria" id="CTQ67093">
        <property type="protein sequence ID" value="CTQ67093"/>
        <property type="gene ID" value="LAX5112_01210"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021251">
        <property type="entry name" value="DUF2793"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10983">
        <property type="entry name" value="DUF2793"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67093.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="143" mass="15877" checksum="E7C80B41C196A700" modified="2015-12-09" version="1">MTELTNWAANGTPRAPTQEEIDGGFECGPADKDLFDWLFQQLALRSNLISLVGFYQSVEAIENHPPADPEAGQSWLIGAAPTGDWVGHIDKIAIWTGLDWITVTPKPRMLVGVRNGPDLRWRDDLSTPGWMPEISSIAYRSMI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A000</accession>
    <name>A0A0M7A000_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Bacteriophytochrome cph2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">cph2_6</name>
        <name evidence="3" type="ORF">LAX5112_01523</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67796.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671325.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01523"/>
    <dbReference type="EnsemblBacteria" id="CTQ67796">
        <property type="protein sequence ID" value="CTQ67796"/>
        <property type="gene ID" value="LAX5112_01523"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd01949">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00130">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000160">
        <property type="entry name" value="GGDEF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000014">
        <property type="entry name" value="PAS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035965">
        <property type="entry name" value="PAS-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00990">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00267">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00091">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55785">
        <property type="entry name" value="SSF55785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00254">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00229">
        <property type="entry name" value="sensory_box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50887">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50112">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PAS" evidence="1">
        <location>
            <begin position="19"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="domain" description="GGDEF" evidence="2">
        <location>
            <begin position="179"/>
            <end position="320"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50112"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ67796.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="324" mass="34384" checksum="4A539F3A6F0F27D7" modified="2015-12-09" version="1">MALDQNGGTASGAAASQPSNLNFETLLSLSGDAILQLGLTGTLEYASPSAARLFGWDSEKLPEHLSDLVYLGPPNPEAETLHKILSGAATPDVSLPHADLQLRSAHGSLVWAEVTTHLIEKGGEPAAFAVFFRSIARQKELEGLLEAATQTDTLTGLFNRRAFEDTLNREWAIALRENTHTTLIKVSVDKFDAISEQYGQSAADDCVTKVADVLKDTARRPADVAARISMSEFALLLPRTHEMGAETISAYIQVAIQDLGIPNPGNTAHNGVVTASVGTACAVAEHKGVLESSEFLLAASESCVFQARQKGGNRVNFSMSVLGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A010</accession>
    <name>A0A0M7A010_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">2-keto-3-deoxy-L-rhamnonate aldolase</fullName>
            <ecNumber evidence="3">4.1.2.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">rhmA</name>
        <name evidence="3" type="ORF">LAX5112_01563</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the HpcH/HpaI aldolase family.</text>
    </comment>
    <dbReference type="EC" id="4.1.2.-" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67901.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01563"/>
    <dbReference type="EnsemblBacteria" id="CTQ67901">
        <property type="protein sequence ID" value="CTQ67901"/>
        <property type="gene ID" value="LAX5112_01563"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005000">
        <property type="entry name" value="Aldolase/citrate-lyase_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015813">
        <property type="entry name" value="Pyrv/PenolPyrv_Kinase-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040442">
        <property type="entry name" value="Pyrv_Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03328">
        <property type="entry name" value="HpcH_HpaI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51621">
        <property type="entry name" value="SSF51621"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0456">Lyase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HpcH_HpaI" evidence="2">
        <location>
            <begin position="45"/>
            <end position="267"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005568"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF03328"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ67901.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="290" mass="30423" checksum="96CFA1A94CF74BE6" modified="2015-12-09" version="1">MRHISGLREARDPCLMAANQEETTVTDPKTLADKLRSGQPVITGWSMLAAPIVAELFARSGYEAVTLDLQHGMHDFKSASDGFAALVLGGAHRIARIPVGGNATASRLADMGAECLIAPMINSRADAEAFVKAVKYPPVGERSWAPFRVVTLNQQTPDAYLKTANEQTLALAMVETRTSVDALEDILAVPGLDGVFVGPSDLSLALSSGEKLDPNGAETARVCGEIAARAKAAGKIAGIFCIGAAKVEEAIAQGFRLMAHGTDMMMFDEAARAHLQEVDAATGSGPAASY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A030</accession>
    <name>A0A0M7A030_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative domain 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01703</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68345.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008192655.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01703"/>
    <dbReference type="EnsemblBacteria" id="CTQ68345">
        <property type="protein sequence ID" value="CTQ68345"/>
        <property type="gene ID" value="LAX5112_01703"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029069">
        <property type="entry name" value="HotDog_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003736">
        <property type="entry name" value="PAAI_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006683">
        <property type="entry name" value="Thioestr_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03061">
        <property type="entry name" value="4HBT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54637">
        <property type="entry name" value="SSF54637"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00369">
        <property type="entry name" value="unchar_dom_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="4HBT" evidence="1">
        <location>
            <begin position="77"/>
            <end position="154"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03061"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68345.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="174" mass="18714" checksum="67C66502041E9E01" modified="2015-12-09" version="1">MTTAQTVTENGKTYQFDALPKEQVAGISGMDVFKLMLDGQLPAPPIMLQSNIRLKEFDHGRAVFVGQPEKQFLNPLGTIHGGWISTILDSALSCAVHTCLEPGEFYTTTSLTVNMVRPLMPGSGEVTCEGRIVHRGSRLATSEGELKDARGKLIAHATVSCMIFPNPAASSPGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0X1</accession>
    <name>A0A0M7A0X1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01816</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68635.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01816"/>
    <dbReference type="EnsemblBacteria" id="CTQ68635">
        <property type="protein sequence ID" value="CTQ68635"/>
        <property type="gene ID" value="LAX5112_01816"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="39"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="75"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="98"/>
            <end position="119"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68635.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="132" mass="14676" checksum="A56C329A1A5D5CD4" modified="2015-12-09" version="1">MKGYFYGCVTAALVLLIFLLLLSGYFSEAIDRPTGSIFAVFMVTLVLVFFAYALSILPVTFILITAEIFHIRHSIFYTLSGAVIGFGVTRVIDDQVYTLFDLVSFMSSGALAGLVYWHIAGRDAGRGRWPRF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A129</accession>
    <name>A0A0M7A129_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">SnoaL-like domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01855</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68705.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671560.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ68705">
        <property type="protein sequence ID" value="CTQ68705"/>
        <property type="gene ID" value="LAX5112_01855"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027843">
        <property type="entry name" value="DUF4440"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032710">
        <property type="entry name" value="NTF2-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14534">
        <property type="entry name" value="DUF4440"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54427">
        <property type="entry name" value="SSF54427"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF4440" evidence="1">
        <location>
            <begin position="10"/>
            <end position="119"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF14534"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68705.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="140" mass="15583" checksum="6072CC754C9B9356" modified="2015-12-09" version="1">MEAIDELSEVREVMNTWLAAFETHDLDALMRVYHAECVYANAQSPLMQGVSEIRPWFATAFEMLDGSMMFQEEGHVITGEIAILYGKYCLKKSKGSAGTDDAGRVALVMKKDPNGAWRIVFDMDNTPPDAAPADFNKSEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A185</accession>
    <name>A0A0M7A185_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Bacterial extracellular solute-binding proteins, family 3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_01894</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68808.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01894"/>
    <dbReference type="EnsemblBacteria" id="CTQ68808">
        <property type="protein sequence ID" value="CTQ68808"/>
        <property type="gene ID" value="LAX5112_01894"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809177" evidence="2">
        <location>
            <begin position="27"/>
            <end position="268"/>
        </location>
    </feature>
    <feature type="domain" description="PBPb" evidence="3">
        <location>
            <begin position="44"/>
            <end position="250"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00497"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ68808.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="268" mass="30126" checksum="15349F81D4ECBD31" modified="2015-12-09" version="1">MLRLRRAKLACQFILMLLMLSASAFAQTLTFAADEWCPVNCEPGSERPGYMVEIASRILDPLGYEVRYQQITWARALLFARQGRFDGVFAGTPEEATGFVFPSEAQGRYTIGMFVAKDDSWRYDGPSSLKNKRAGLIIDYGYGEEIEAAVNRYSEVVRTGGNNALEQNIRTLAAGRLDYMLEDINTFSYKAEEMGLADRFRLEKTFTQDDLFIALSPAHANSHEIAKALSDGMHRLRDSGELSQILQRYGLRDWIVPTSQGHSSKVPN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1C2</accession>
    <name>A0A0M7A1C2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Adenylate cyclase 1</fullName>
            <ecNumber evidence="2">4.6.1.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">cyaA_10</name>
        <name evidence="2" type="ORF">LAX5112_01823</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="4.6.1.1" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68649.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671541.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01823"/>
    <dbReference type="EnsemblBacteria" id="CTQ68649">
        <property type="protein sequence ID" value="CTQ68649"/>
        <property type="gene ID" value="LAX5112_01823"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004016">
        <property type="term" value="F:adenylate cyclase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009190">
        <property type="term" value="P:cyclic nucleotide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035556">
        <property type="term" value="P:intracellular signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07302">
        <property type="entry name" value="CHD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.450.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1230">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001054">
        <property type="entry name" value="A/G_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029016">
        <property type="entry name" value="GAF-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00211">
        <property type="entry name" value="Guanylate_cyc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00044">
        <property type="entry name" value="CYCc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50125">
        <property type="entry name" value="GUANYLATE_CYCLASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Guanylate cyclase" evidence="1">
        <location>
            <begin position="214"/>
            <end position="348"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68649.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="415" mass="45035" checksum="068D1B5249C2402C" modified="2015-12-09" version="1">MVLEAPLVAADVVQWLYSDAPQLDGTLEIVSELAQRLRAGGVPVDRATTGIWIVHPNVRAEGSIWDSEGTRELRRYVPGEDADANYESSPIKRVHETKQPVRVDIANCAGTDDDFPVCQELREEGYTDYIALPMPFSDGSVKVATFATKAPKGFSGGNLSVFDSIMRPLALVCELKTLRRTAETVLDTYVGPRAGLKVLDGTTRRGEGEWIKAVISFADIRGFTRLSNTLPADKLVLFLNKYFGAMTEAVEAHGGEVLKFIGDEVMAIFPYETEEEAKSAAYNALLAARDTLKKIGEINQQKTCMVTPDMSVGIALHAGDVFYGNVGSETRLDFTVVGPAVNLAARIAELAKDLGREVLVSDNVAGLMGCRSGLFGSYHVKGFDDPVSVYSPNLTSGEKFDNCPDITVARALEEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A269</accession>
    <name>A0A0M7A269_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01845</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68687.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01845"/>
    <dbReference type="EnsemblBacteria" id="CTQ68687">
        <property type="protein sequence ID" value="CTQ68687"/>
        <property type="gene ID" value="LAX5112_01845"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007434">
        <property type="entry name" value="FemAB-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04339">
        <property type="entry name" value="FemAB_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="32"/>
            <end position="52"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68687.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="474" mass="52652" checksum="6C5696F6666BC90B" modified="2015-12-09" version="1">MDDHSWTGIPSCGAAKRLYILVNNPFMAGRHTDMTSSISPDNEQPQKPGAGDAETTLSIRLLSSLADVPANKWDAVANPGWILSQGGKLTRTPGAGESQDLTSALAPEADSFSEETDFNPFLSHAFLEALEASGCATRQTGWMPRHMVLEDGNGAVLGAVPAYLKSHSQGEYVFDHGWADAFYRAGGDYYPKLQISVPFTPATGRRFLTSPDINREAGLQALAAGLVQVCQRTGASSVHATFLTKPEWQSLGDLGYLRRTDQQFHWDNNGYDTFDQFLGDLASRKRKAIKKERREALSAEGLEIEWVTGSDLTEAHWDAFYGFYMDTGARKWGRPYLNRAFFSLISERMADRILLVLAKRNGRYVAGALNFIGSETLFGRHWGCTEHHPFLHFELCYYQAIDFAISKGLKRVEAGAQGAHKLARGYLPQTTYSAHWIAHEGLHDAVADFLEQERRAVQRENEALAEHAPFRKDS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2J0</accession>
    <name>A0A0M7A2J0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative diguanylate cyclase YedQ</fullName>
            <ecNumber evidence="3">2.7.7.65</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yedQ_1</name>
        <name evidence="3" type="ORF">LAX5112_01884</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.7.7.65" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68781.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671582.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01884"/>
    <dbReference type="EnsemblBacteria" id="CTQ68781">
        <property type="protein sequence ID" value="CTQ68781"/>
        <property type="gene ID" value="LAX5112_01884"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052621">
        <property type="term" value="F:diguanylate cyclase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd01949">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000160">
        <property type="entry name" value="GGDEF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00990">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00267">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00254">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50887">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="39"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="66"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="99"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="125"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="156"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="193"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="domain" description="GGDEF" evidence="2">
        <location>
            <begin position="255"/>
            <end position="387"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ68781.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="410" mass="44809" checksum="73EEE2DBCA9611AE" modified="2015-12-09" version="1">MTLDTPTLLIALAAAEFASALILLAFLVSLKKANRATRLAFAIYAPAMFLVACGTVLVAFRSEISAFWSITFANALFLIGFALRPEAIAVFYGRPARGWMLLAALSGWTVICIVPDFFASFTLRLIFVQSMLLAAAAYSVWRVFRLNSEHLTSVRLFMVGSFLEASAYLMTIGSQIIYQHESLKVFANPIQPLAYLVLLMVAIVIVSASFVAMAIERIQVRFEKQALTDSLTGLANRRAFIKAAKRWFSSTAQTQAYTLILIDIDHFKSINDQFGHTAGDRVLASFGTAMKSIFARAIPPGRIGGEEFAVLLPETEKADAVHLLGRLREVISQCAICPKSEASGITVSAGLITATTSHDFEQAFDHADQLLYEAKKTGRNRHVALDKTVPSDELTIVNTANQPRGMVASL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2U7</accession>
    <name>A0A0M7A2U7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Phosphoserine phosphatase</fullName>
            <ecNumber evidence="6">3.1.3.3</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="13">O-phosphoserine phosphohydrolase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="15" type="primary">serB</name>
        <name evidence="15" type="ORF">LAX5112_01615</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>H2O + O-phospho-D-serine = D-serine + phosphate</text>
            <dbReference type="Rhea" id="RHEA:24873"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:35247"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58680"/>
            <dbReference type="EC" id="3.1.3.3"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>H2O + O-phospho-L-serine = L-serine + phosphate</text>
            <dbReference type="Rhea" id="RHEA:21208"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:33384"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57524"/>
            <dbReference type="EC" id="3.1.3.3"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="3">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="4">Amino-acid biosynthesis; L-serine biosynthesis; L-serine from 3-phospho-D-glycerate: step 3/3.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the HAD-like hydrolase superfamily. SerB family.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.3" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68044.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671393.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01615"/>
    <dbReference type="EnsemblBacteria" id="CTQ68044">
        <property type="protein sequence ID" value="CTQ68044"/>
        <property type="gene ID" value="LAX5112_01615"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00135">
        <property type="reaction ID" value="UER00198"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0036424">
        <property type="term" value="F:L-phosphoserine phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006564">
        <property type="term" value="P:L-serine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004469">
        <property type="entry name" value="PSP"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDF00029">
        <property type="entry name" value="phosphoserine_phosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00338">
        <property type="entry name" value="serB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="10 15" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="11" id="KW-0460">Magnesium</keyword>
    <keyword evidence="9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="12" id="KW-0718">Serine biosynthesis</keyword>
    <feature type="active site" description="Nucleophile" evidence="14">
        <location>
            <position position="86"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="14">
        <location>
            <position position="88"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000860"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001197"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00005135"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00009184"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00012640"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00015196"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023299"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00031693"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="PIRSR" id="PIRSR604469-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="CTQ68044.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="296" mass="31289" checksum="865CE7D55C20E83A" modified="2015-12-09" version="1">MSLVATLVSKPTAPAVGGDLAQRAAEALKSDTPPTTLNPGVAADIFFDGVDARAADTKLREIIAAAPVDVFVQPVKSRKKKLLIADMDSTMIRQECIDELAAELGLKEKISEITERAMRGEIDFEPALRERVGLLKGLPLSAIDSVLSNRITLMPGGRTLVQTMKANGAYCALVSGGFTHFTGTIAAMIGFDENQANILLADDGKLSGLVAEPILGRDAKRDRLEALVADKGLSFDDTIAVGDGANDLAMIERAGAGVAYRAKPAVAAAADFRIDHGDLTALLYFQGYADQDFVLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A477</accession>
    <name>A0A0M7A477_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Copper resistance protein C</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">pcoC</name>
        <name evidence="6" type="ORF">LAX5112_02212</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the CopC family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69689.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671849.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02212"/>
    <dbReference type="EnsemblBacteria" id="CTQ69689">
        <property type="protein sequence ID" value="CTQ69689"/>
        <property type="gene ID" value="LAX5112_02212"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005507">
        <property type="term" value="F:copper ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006825">
        <property type="term" value="P:copper ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046688">
        <property type="term" value="P:response to copper ion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1220">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032694">
        <property type="entry name" value="CopC/D"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007348">
        <property type="entry name" value="CopC_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014755">
        <property type="entry name" value="Cu-Rt/internalin_Ig-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014756">
        <property type="entry name" value="Ig_E-set"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34820">
        <property type="entry name" value="PTHR34820"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04234">
        <property type="entry name" value="CopC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81296">
        <property type="entry name" value="SSF81296"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0186">Copper</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809269" evidence="4">
        <location>
            <begin position="25"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="domain" description="CopC" evidence="5">
        <location>
            <begin position="25"/>
            <end position="117"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010509"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF04234"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ69689.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="119" mass="12463" checksum="00457A14C49D5E9D" modified="2015-12-09" version="1">MMTRFMYLALAAALGTAVATSALAHSSKETTSPPDGSTVAQSPDAIVMTFDAPMRITLIQVTGQDGTDYPVTRTDNMAPSKTFQAVPAALPDGSYTVNWRGLAEDGHAMDGSFTFSVGN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4C5</accession>
    <name>A0A0M7A4C5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Efflux pump periplasmic linker BepF</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">bepF_4</name>
        <name evidence="4" type="ORF">LAX5112_02128</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69477.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671786.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02128"/>
    <dbReference type="EnsemblBacteria" id="CTQ69477">
        <property type="protein sequence ID" value="CTQ69477"/>
        <property type="gene ID" value="LAX5112_02128"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032317">
        <property type="entry name" value="HlyD_D23"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006143">
        <property type="entry name" value="RND_pump_MFP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16576">
        <property type="entry name" value="HlyD_D23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01730">
        <property type="entry name" value="RND_mfp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809228" evidence="2">
        <location>
            <begin position="32"/>
            <end position="288"/>
        </location>
    </feature>
    <feature type="domain" description="HlyD_D23" evidence="3">
        <location>
            <begin position="42"/>
            <end position="273"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF16576"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ69477.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="288" mass="30898" checksum="288799602B80955C" modified="2015-12-09" version="1">MLVFRMHGIGKGRALLLAALCTIGLMVSADAETLEFDGQVEAVHQADVYSRAEGIVAEVLVAQGDFVDAGTVLARLQQDVPKLKVAVSEARLARANALLEQAHGRLARIQRLTTSGTASDVALTEAKTDLVLAEAAQRAESAELSLARTSLDDTVIRAPIAGFVEDPRVRVGALLEFSSGDPPIFQIVNLDPVQIVYEVPYEIRLRQMKESGASTSDEFLQTVRLQVMTTDGELLARGLVPTATAVWVEPDTGTIRVWATLENSAGVLRPGMRVRVLSEVIKSGSATQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4N2</accession>
    <name>A0A0M7A4N2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Cysteine synthase</fullName>
            <ecNumber evidence="3">2.5.1.47</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">cysK1</name>
        <name evidence="8" type="ORF">LAX5112_02095</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>hydrogen sulfide + O-acetyl-L-serine = acetate + L-cysteine</text>
            <dbReference type="Rhea" id="RHEA:14829"/>
            <dbReference type="ChEBI" id="CHEBI:29919"/>
            <dbReference type="ChEBI" id="CHEBI:30089"/>
            <dbReference type="ChEBI" id="CHEBI:35235"/>
            <dbReference type="ChEBI" id="CHEBI:58340"/>
            <dbReference type="EC" id="2.5.1.47"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 5">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <dbReference type="EC" id="2.5.1.47" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69386.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671762.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02095"/>
    <dbReference type="EnsemblBacteria" id="CTQ69386">
        <property type="protein sequence ID" value="CTQ69386"/>
        <property type="gene ID" value="LAX5112_02095"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004124">
        <property type="term" value="F:cysteine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006535">
        <property type="term" value="P:cysteine biosynthetic process from serine"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1100">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005856">
        <property type="entry name" value="Cys_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005859">
        <property type="entry name" value="CysK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001926">
        <property type="entry name" value="PLP-dep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036052">
        <property type="entry name" value="Trypto_synt_PLP_dependent"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00291">
        <property type="entry name" value="PALP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53686">
        <property type="entry name" value="SSF53686"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01139">
        <property type="entry name" value="cysK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01136">
        <property type="entry name" value="cysKM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PALP" evidence="7">
        <location>
            <begin position="15"/>
            <end position="304"/>
        </location>
    </feature>
    <feature type="region of interest" description="Pyridoxal phosphate binding" evidence="5">
        <location>
            <begin position="189"/>
            <end position="193"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="85"/>
        </location>
        <ligand>
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="277"/>
        </location>
        <ligand>
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </ligand>
    </feature>
    <feature type="modified residue" description="N6-(pyridoxal phosphate)lysine" evidence="6">
        <location>
            <position position="54"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000298"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012681"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR605856-50"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR605856-51"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00291"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ69386.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="319" mass="33564" checksum="2896591D4A87A4E0" modified="2015-12-09" version="1">MTIKTHGRGKIYSSITDTIGDTPLVRLDRLANAHGVKATLLGKLEFFNPIASVKDRIGVAMIDAMERDGKIEAGKTTLVEPTSGNTGIALAFVAAAKGYRLILVMPETMSVERRKMFKILGAELELTEGAKGMKGAIARAEELLGEIDGAVMPQQFENPANPEIHRNTTAEEIWNDTSGAVDVFVSGIGTGGTITGVSQVLKDRKPDLHVVAVEPEDSPILSGGQPGPHKIQGIGAGFVPGVLDTGVFDEIAKVSNEDAFAMAREVAKTEGIPVGISSGAALSAAIKAGQRDEMAGKTIVVIIPSFAERYLSTALFEGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4U2</accession>
    <name>A0A0M7A4U2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01820</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68644.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ68644">
        <property type="protein sequence ID" value="CTQ68644"/>
        <property type="gene ID" value="LAX5112_01820"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019825">
        <property type="term" value="F:oxygen binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.490.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009050">
        <property type="entry name" value="Globin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012292">
        <property type="entry name" value="Globin/Proto"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46458">
        <property type="entry name" value="SSF46458"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ68644.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="134" mass="15064" checksum="268B392CE0546C55" modified="2015-12-09" version="1">MTLYMKIGGRKAVLAAIPPLRDRLESDPCFDLAPLRGEFDAPGDFCEFLVFLFGGSPFYDGKPVTDLLSPLCDCDDVYRRFVDHLVTVLLHGDQNEENEAELRSLMERLQPHVLAPRPTAPVLVYSVDNDQLRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4U7</accession>
    <name>A0A0M7A4U7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Peroxiredoxin, subfamily</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02379</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70145.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671996.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02379"/>
    <dbReference type="EnsemblBacteria" id="CTQ70145">
        <property type="protein sequence ID" value="CTQ70145"/>
        <property type="gene ID" value="LAX5112_02379"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015946">
        <property type="entry name" value="KH_dom-like_a/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003718">
        <property type="entry name" value="OsmC/Ohr_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036102">
        <property type="entry name" value="OsmC/Ohrsf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02566">
        <property type="entry name" value="OsmC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82784">
        <property type="entry name" value="SSF82784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ70145.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="161" mass="17564" checksum="488AD88BEEDAC0A9" modified="2015-12-09" version="1">MAGHYYTAVVEWACDGDYAANKYSRGHIWQFDGGLKIPASASPTVVPQPYSIEAAVDPEEALVAAISSCHMMSFLDLARRAGYVVASYRDSAKGEMSRIARGKMAITKVVLKPEIVLVADRDPDPSWITDLHEKAHDVCFIANSVKCEIVVDPEPVRTVAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4Z6</accession>
    <name>A0A0M7A4Z6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02385</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70158.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672002.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02385"/>
    <dbReference type="EnsemblBacteria" id="CTQ70158">
        <property type="protein sequence ID" value="CTQ70158"/>
        <property type="gene ID" value="LAX5112_02385"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010293">
        <property type="entry name" value="Sbt_1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR40400">
        <property type="entry name" value="PTHR40400"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05982">
        <property type="entry name" value="Sbt_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="45"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="70"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="105"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="130"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="262"/>
            <end position="281"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="325"/>
            <end position="346"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70158.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="355" mass="36470" checksum="4E6290E3BA00A459" modified="2015-12-09" version="1">MDIFFEIITTLAAQFQKPTLAFLMGGMLIAAMGSKLEVPEPVYKFVVLLLLLKVGLGAGISVRSADAMSFAVPAICAALLGVVIVVFGGKILAMWRGVSNADAMATAGLFGAVSASTLAAGMAMLDSEGIYYEGFIGALYPFMDVAALVTAIFLARMSAERRAAGTVQSDGTATMSTGGGGFGLGGGFDGQLAKGIIVDTIKSPAISALLLGIGIGLLARPEAVYESFYEPLFRGLLSILMLVMGMEAWARLSELKKVAHAYLIYGLTAPLLHGLLGFGMGLVAHHFTGFSAGGVVLLSIMAASSSDISGPPTMRAALPDANPSAYIGSSTGLGTPVAILSIPLFITLAELVIGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A545</accession>
    <name>A0A0M7A545_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">HTH-type transcriptional activator HxlR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">hxlR_2</name>
        <name evidence="2" type="ORF">LAX5112_02428</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70245.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672033.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70245">
        <property type="protein sequence ID" value="CTQ70245"/>
        <property type="gene ID" value="LAX5112_02428"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002577">
        <property type="entry name" value="HTH_HxlR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01638">
        <property type="entry name" value="HxlR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51118">
        <property type="entry name" value="HTH_HXLR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH hxlR-type" evidence="1">
        <location>
            <begin position="15"/>
            <end position="113"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51118"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70245.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="125" mass="13898" checksum="9477A302CDD016DE" modified="2015-12-09" version="1">MLPIGVETKAEASNCPIRSVLSNVTGKWRMIIVLALEDGPMRFGEIKRCIGDVTQRVLTENLRGLQRDGYLTRTVDPGPPVAVSYELTPLGQSLVATLKPLVFWSGEQMEQVKTARLEYDRANPK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A699</accession>
    <name>A0A0M7A699_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02295</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ69946.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008192874.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ69946">
        <property type="protein sequence ID" value="CTQ69946"/>
        <property type="gene ID" value="LAX5112_02295"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="50"/>
            <end position="69"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69946.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="72" mass="7843" checksum="F9A656D1A51576A8" modified="2015-12-09" version="1">MLPAIVLVAEGLVVLWFTVFIGMMVSMYLDSRSMPLPRLDVAGRTLIGSAKLAFAVGMTALAALTYYEIPMF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6T8</accession>
    <name>A0A0M7A6T8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">4-hydroxyphenylpyruvate dioxygenase</fullName>
            <ecNumber evidence="8">1.13.11.27</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">hpd</name>
        <name evidence="8" type="ORF">LAX5112_02083</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="5">
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
        </cofactor>
        <text evidence="5">Binds 1 Fe cation per subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the 4HPPD family.</text>
    </comment>
    <dbReference type="EC" id="1.13.11.27" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69354.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671755.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02083"/>
    <dbReference type="EnsemblBacteria" id="CTQ69354">
        <property type="protein sequence ID" value="CTQ69354"/>
        <property type="gene ID" value="LAX5112_02083"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003868">
        <property type="term" value="F:4-hydroxyphenylpyruvate dioxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009072">
        <property type="term" value="P:aromatic amino acid family metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07250">
        <property type="entry name" value="HPPD_C_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd08342">
        <property type="entry name" value="HPPD_N_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.180.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005956">
        <property type="entry name" value="4OHPhenylPyrv_dOase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041735">
        <property type="entry name" value="4OHPhenylPyrv_dOase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041736">
        <property type="entry name" value="4OHPhenylPyrv_dOase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029068">
        <property type="entry name" value="Glyas_Bleomycin-R_OHBP_Dase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004360">
        <property type="entry name" value="Glyas_Fos-R_dOase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037523">
        <property type="entry name" value="VOC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11959">
        <property type="entry name" value="PTHR11959"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00903">
        <property type="entry name" value="Glyoxalase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF009283">
        <property type="entry name" value="HPP_dOase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54593">
        <property type="entry name" value="SSF54593"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01263">
        <property type="entry name" value="4HPPD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51819">
        <property type="entry name" value="VOC"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0223">Dioxygenase</keyword>
    <keyword evidence="4 5" id="KW-0408">Iron</keyword>
    <keyword evidence="2 5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="8" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="VOC" evidence="7">
        <location>
            <begin position="23"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="domain" description="VOC" evidence="7">
        <location>
            <begin position="167"/>
            <end position="323"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="170"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="248"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="332"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005877"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR009283-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51819"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ69354.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="370" mass="41698" checksum="056E4B980F5257F3" modified="2015-12-09" version="1">MGPFPHDAPPAQITPQNPAGTDGFEFVEFAHPEPEKLDALFRRMGYVPVAKHKTKAITLYRQGDITYVLNAEPGSHAMRFVEDHGPCAPSMAWRVVDAQKAYDHAISKGAEPYADNDKTLNVPAIKGIGGSLLYFIEAYGDKGSAYSAEFDWLGEVDPKPEGVGFYYLDHLTHNVYRGNMDKWWDFYRDLFNFKQIHFFDIDGRITGLVSRAITSPCGKIRIPLNESKDDTSQIEEYLRKYKGEGIQHIAVGSDDIYTSTDKLADNELKFMPGPPDTYYEMSRDRVHGHDEPIERMKLHGILIDGEGVIDGGMTKILLQIFSKTVIGPIFFEFIQRKGDEGFGEGNFRALFESIEEDQIRRGVLNTEAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7Q6</accession>
    <name>A0A0M7A7Q6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Maltose/maltodextrin import ATP-binding protein MalK</fullName>
            <ecNumber evidence="10">3.6.3.19</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">malK_4</name>
        <name evidence="10" type="ORF">LAX5112_02562</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.19" evidence="10"/>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70651.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672161.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02562"/>
    <dbReference type="EnsemblBacteria" id="CTQ70651">
        <property type="protein sequence ID" value="CTQ70651"/>
        <property type="gene ID" value="LAX5112_02562"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015408">
        <property type="term" value="F:ABC-type ferric iron transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd03259">
        <property type="entry name" value="ABC_Carb_Solutes_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015853">
        <property type="entry name" value="ABC_transpr_FbpC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008995">
        <property type="entry name" value="Mo/tungstate-bd_C_term_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013611">
        <property type="entry name" value="Transp-assoc_OB_typ2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08402">
        <property type="entry name" value="TOBE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50331">
        <property type="entry name" value="SSF50331"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 8 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="10" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-0472">Membrane</keyword>
    <keyword evidence="5 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ABC transporter" evidence="9">
        <location>
            <begin position="3"/>
            <end position="233"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="35"/>
            <end position="42"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ70651.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="354" mass="38463" checksum="CCD8F054C0D962DC" modified="2015-12-09" version="1">MSLQLKNVSKRVGSITHVKETTLSLEPGHFNVLLGETGSGKTSLIKMMAGLDSLATGEIFINGKNVSGLSAQKRNISLVHQFFVNYPHMTVFDNIASPLKVAGVAKSEIADRVAEAAGLMKLGPYLKRNPHELSGGQQQRCALARAIVKESDAVFLDEPLANLDYKLREELRDQLPELFAGRGAVVVYATSEPEEALLLGGRTALMTDGNVVQFGPTAEIYRQPKDLDAAKVFSNPPINTAEVSKQGDEVILNDQTRWKLSGAAAGLSDGLYMLAIRPHHVMPVETEHNTVRLEGHVQVTELSGSESSAHFDMDGQSWVSLSPGVHPYFVGEVHTFYLDPNHCFFFAPSGELVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A882</accession>
    <name>A0A0M7A882_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">HTH-type transcriptional repressor NsrR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">nsrR_2</name>
        <name evidence="1" type="ORF">LAX5112_02293</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ69943.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672116.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02293"/>
    <dbReference type="EnsemblBacteria" id="CTQ69943">
        <property type="protein sequence ID" value="CTQ69943"/>
        <property type="gene ID" value="LAX5112_02293"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030489">
        <property type="entry name" value="TR_Rrf2-type_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000944">
        <property type="entry name" value="Tscrpt_reg_Rrf2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33221">
        <property type="entry name" value="PTHR33221"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02082">
        <property type="entry name" value="Rrf2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00738">
        <property type="entry name" value="rrf2_super"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01332">
        <property type="entry name" value="HTH_RRF2_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51197">
        <property type="entry name" value="HTH_RRF2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ69943.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="136" mass="14420" checksum="F4AE27B842BE743B" modified="2015-12-09" version="1">MRLSQASDFALRLLMAISQSDAPQTVDKLTAQLGLAKSHVMKIVAQLAKAGYLETTRGRGGGIRIAKEADDIRIGDVVRLIEPDLGVVACLKDEPASCPFLPRCALKGAMARAAEAFLDSLNEQSLGSILAGTQKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9H4</accession>
    <name>A0A0M7A9H4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Glycine--tRNA ligase alpha subunit</fullName>
            <ecNumber evidence="9">6.1.1.14</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">Glycyl-tRNA synthetase alpha subunit</fullName>
            <shortName evidence="9">GlyRS</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9 10" type="primary">glyQ</name>
        <name evidence="10" type="ORF">LAX5112_02443</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 9">
            <text>ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-tRNA(Gly)</text>
            <dbReference type="Rhea" id="RHEA:16013"/>
            <dbReference type="Rhea" id="RHEA-COMP:9664"/>
            <dbReference type="Rhea" id="RHEA-COMP:9683"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57305"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78522"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.14"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="3 9">Tetramer of two alpha and two beta subunits.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the class-II aminoacyl-tRNA synthetase family.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.14" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70274.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672045.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02443"/>
    <dbReference type="EnsemblBacteria" id="CTQ70274">
        <property type="protein sequence ID" value="CTQ70274"/>
        <property type="gene ID" value="LAX5112_02443"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004820">
        <property type="term" value="F:glycine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006426">
        <property type="term" value="P:glycyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00733">
        <property type="entry name" value="GlyRS_alpha_core"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.930.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00254">
        <property type="entry name" value="Gly_tRNA_synth_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045864">
        <property type="entry name" value="aa-tRNA-synth_II/BPL/LPL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006194">
        <property type="entry name" value="Gly-tRNA-synth_heterodimer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002310">
        <property type="entry name" value="Gly-tRNA_ligase_asu"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02091">
        <property type="entry name" value="tRNA-synt_2e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01044">
        <property type="entry name" value="TRNASYNTHGA"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55681">
        <property type="entry name" value="SSF55681"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00388">
        <property type="entry name" value="glyQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50861">
        <property type="entry name" value="AA_TRNA_LIGASE_II_GLYAB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 9" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="6 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 9 10" id="KW-0436">Ligase</keyword>
    <keyword evidence="5 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7 9" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000201"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008226"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011209"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00254"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ70274.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="321" mass="36077" checksum="063A34E2218DAD70" modified="2015-12-09" version="1">MSSDVPAHMRPENSFQGLILTLQRFWADQGCVVLQPYDMEVGAGTFHPATTLRSLGPRPWKAAYVQPSRRPTDGRYGENPNRLQHYYQFQVLLKPSPSNLQELYLNSLYAIGLDPKVHDIRFVEDDWESPTLGAWGLGWECWCDGMEVSQFTYFQQVAGFECSPVSGELTYGLERLAMYIQGVDNVYDLNYNGMEGADKVTYGDVFLQAEQEYSRYNFEHANTEALFQHFKDAEAECRAILDAGAKARDDNGLSVHQVVLPAYDQCIKASHAFNLLDARGVISVTERQSYILRVRELAKACGAAFLETEAGGVGYHNQAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9N1</accession>
    <name>A0A0M7A9N1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Abasic site processing protein</fullName>
            <ecNumber evidence="7">3.4.-.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">LAX5112_02472</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 7">Belongs to the SOS response-associated peptidase family.</text>
    </comment>
    <dbReference type="EC" id="3.4.-.-" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70334.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672063.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02472"/>
    <dbReference type="EnsemblBacteria" id="CTQ70334">
        <property type="protein sequence ID" value="CTQ70334"/>
        <property type="gene ID" value="LAX5112_02472"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008233">
        <property type="term" value="F:peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003697">
        <property type="term" value="F:single-stranded DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006974">
        <property type="term" value="P:cellular response to DNA damage stimulus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018142">
        <property type="term" value="P:protein-DNA covalent cross-linking"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1680.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003738">
        <property type="entry name" value="SRAP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036590">
        <property type="entry name" value="SRAP-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13604">
        <property type="entry name" value="PTHR13604"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02586">
        <property type="entry name" value="SRAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF143081">
        <property type="entry name" value="SSF143081"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0190">Covalent protein-DNA linkage</keyword>
    <keyword evidence="3" id="KW-0227">DNA damage</keyword>
    <keyword evidence="6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4 7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 7" id="KW-0645">Protease</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="220"/>
            <end position="248"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU364100"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ70334.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="248" mass="27802" checksum="66B110834B3E4C79" modified="2015-12-09" version="1">MCGRYSLTATPDDVRALFGYIDQPNFPARYNIAPTQPVATVINAHGQRRFQLVRWGLIPSWVKDPASFTLLINARAETAAEKPSFRSAMKHHRCLFPASGFYEWRRTPEGKQPFYISPADGGLMAFAGLWETWSDPDGGDMDSGAMLTTQSNRMMSEIHHRMPVILKPESFETWLDTGNVAVRDVKQLMLPIEDDYLKAVPVSSRVNKVVNDDLDLQVEVPLEQTDAPEKTSRTQKKTATGGGQLDLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AA11</accession>
    <name>A0A0M7AA11_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">L-lactate utilization operon repressor</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">lutR_2</name>
        <name evidence="5" type="ORF">LAX5112_02774</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71302.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672326.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02774"/>
    <dbReference type="EnsemblBacteria" id="CTQ71302">
        <property type="protein sequence ID" value="CTQ71302"/>
        <property type="gene ID" value="LAX5112_02774"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07377">
        <property type="entry name" value="WHTH_GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.530">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011711">
        <property type="entry name" value="GntR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008920">
        <property type="entry name" value="TF_FadR/GntR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000524">
        <property type="entry name" value="Tscrpt_reg_HTH_GntR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07729">
        <property type="entry name" value="FCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00392">
        <property type="entry name" value="GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00895">
        <property type="entry name" value="FCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00345">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48008">
        <property type="entry name" value="SSF48008"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50949">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH gntR-type" evidence="4">
        <location>
            <begin position="1"/>
            <end position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ71302.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="214" mass="24190" checksum="B70AE9FD0E8591DD" modified="2015-12-09" version="1">MSAEYIADSLQAEIIAGRYRPGAELKQGEIAERFQVSRIPIRDALQLLAARGLIVLVPNRRARVISLKRDEIEEIYDIRVLLECNCLKAAIDQMRDADLERISAAFRHSSIDAKTANWSEGDWAFHKALYLPSGKARQIGMIDQLRQTCRIHISGYGILPDQTAQWLKDHQDIVDACHTRDSEKATRVLKLHIEGAGKTLLDAIPRQPNSIIER</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AA25</accession>
    <name>A0A0M7AA25_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">CysZ-like protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02834</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71471.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02834"/>
    <dbReference type="EnsemblBacteria" id="CTQ71471">
        <property type="protein sequence ID" value="CTQ71471"/>
        <property type="gene ID" value="LAX5112_02834"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="55"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="107"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="133"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="174"/>
            <end position="196"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71471.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="218" mass="22879" checksum="8C37E45464FDECC1" modified="2015-12-09" version="1">MFSVAGLDGISRALGWAIVGALVLGMLAAALSAAAISTFAEEYFLHLVFNAAQSIGLVITLIVSTYIFAPTSVLYGLLFQDRVARSIETSDYPQDAPGIRVSGLGPLFRAVLALVGLMVVFIVTALVAVSAGALVGACFFVCVAGALMGRDQFVSIGQRHVSRLEAKRLRKANGWGVLFAGISTALLLLVPVLNLMTPVYSTILMTHLFKKVACASSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AB54</accession>
    <name>A0A0M7AB54_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase</fullName>
            <ecNumber evidence="5">2.7.8.31</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">wcaJ_2</name>
        <name evidence="5" type="ORF">LAX5112_03057</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the bacterial sugar transferase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.8.31" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72109.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672531.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03057"/>
    <dbReference type="EnsemblBacteria" id="CTQ72109">
        <property type="protein sequence ID" value="CTQ72109"/>
        <property type="gene ID" value="LAX5112_03057"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000271">
        <property type="term" value="P:polysaccharide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003362">
        <property type="entry name" value="Bact_transf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02397">
        <property type="entry name" value="Bac_transf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0270">Exopolysaccharide synthesis</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="81"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="domain" description="Bac_transf" evidence="4">
        <location>
            <begin position="79"/>
            <end position="264"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF02397"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ72109.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="273" mass="30622" checksum="E40F96B3251D04CA" modified="2015-12-09" version="1">MADETLTDDRKEARKLYRFGFGTPSSGLFRGTSSGRMQKIRGGAANRIMTARQLRKAASPYAEVKRPVYAARPLQRALKRVFDITGAVAGLVFLFPLLAGIALTIKLTSRGPVFFRQTRLGINGQPFSILKYRTMFVDQCDHTGLQHTIVGDQRVTWVGRFLRQSSFDELPQLWNVLRGQMSLVGPRPYVPGMQAGGVPYECLDYRYYDRLQVLPGITGLAQVNGHRGDASDADMARMRLEYDLAYIENVNLWLDVKIVVRTIAREFLKGSGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AB84</accession>
    <name>A0A0M7AB84_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative xanthine dehydrogenase subunit A</fullName>
            <ecNumber evidence="2">1.17.1.4</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">pucA_3</name>
        <name evidence="2" type="ORF">LAX5112_02901</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.17.1.4" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71666.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02901"/>
    <dbReference type="EnsemblBacteria" id="CTQ71666">
        <property type="protein sequence ID" value="CTQ71666"/>
        <property type="gene ID" value="LAX5112_02901"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004854">
        <property type="term" value="F:xanthine dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003777">
        <property type="entry name" value="XdhC_CoxI"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02625">
        <property type="entry name" value="XdhC_CoxI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="XdhC_CoxI" evidence="1">
        <location>
            <begin position="21"/>
            <end position="88"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02625"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71666.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="113" mass="11619" checksum="6031876EFB023946" modified="2015-12-09" version="1">MSSDVIPPSDGLDVLSTTQSWKEAGRTVALATVVETWGSAPRPAGSHLVIDADGNFEGSVSGGCVEGAVVAEAIDVIETGKAAMLEFGVADETAWRVGLSCGGRIRVYVEPVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABF2</accession>
    <name>A0A0M7ABF2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Alpha/beta hydrolase family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02920</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71762.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672440.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02920"/>
    <dbReference type="EnsemblBacteria" id="CTQ71762">
        <property type="protein sequence ID" value="CTQ71762"/>
        <property type="gene ID" value="LAX5112_02920"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ71762.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="213" mass="22467" checksum="89C1C9337D46F902" modified="2015-12-09" version="1">MTDFLWTRPDTDPLATLLLAHGAGAPMDSTFMEKLAGALAESRIASARFEFAYMAGRRTGGPKKPPPKADKLIGEFQTALQKLMSEAEGPLLVGGKSMGGRVAAMLSGGGSLPSRVKGVGCFGYPFHPTGKPDVEWRLSPLQEAKRPVIILQGDRDPFGNQSEIAEITLPTSVTLTYLEDGNHDFGPRGKSPATLDGNINAAAQAVAEFAAGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABJ9</accession>
    <name>A0A0M7ABJ9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 13">Dihydrolipoyl dehydrogenase</fullName>
            <ecNumber evidence="3 13">1.8.1.4</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="16" type="primary">lpd3</name>
        <name evidence="16" type="ORF">LAX5112_02872</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="17" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 13">
            <text>(R)-N(6)-dihydrolipoyl-L-lysyl-[protein] + NAD(+) = (R)-N(6)-lipoyl-L-lysyl-[protein] + H(+) + NADH</text>
            <dbReference type="Rhea" id="RHEA:15045"/>
            <dbReference type="Rhea" id="RHEA-COMP:10474"/>
            <dbReference type="Rhea" id="RHEA-COMP:10475"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:83099"/>
            <dbReference type="ChEBI" id="CHEBI:83100"/>
            <dbReference type="EC" id="1.8.1.4"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="11 13">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
        <text evidence="11 13">Binds 1 FAD per subunit.</text>
    </comment>
    <comment type="miscellaneous">
        <text evidence="13">The active site is a redox-active disulfide bond.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 13">Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.</text>
    </comment>
    <dbReference type="EC" id="1.8.1.4" evidence="3 13"/>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71580.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672390.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02872"/>
    <dbReference type="EnsemblBacteria" id="CTQ71580">
        <property type="protein sequence ID" value="CTQ71580"/>
        <property type="gene ID" value="LAX5112_02872"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004148">
        <property type="term" value="F:dihydrolipoyl dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045454">
        <property type="term" value="P:cell redox homeostasis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.390.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023753">
        <property type="entry name" value="FAD/NAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016156">
        <property type="entry name" value="FAD/NAD-linked_Rdtase_dimer_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006258">
        <property type="entry name" value="Lipoamide_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001100">
        <property type="entry name" value="Pyr_nuc-diS_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004099">
        <property type="entry name" value="Pyr_nucl-diS_OxRdtase_dimer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012999">
        <property type="entry name" value="Pyr_OxRdtase_I_AS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07992">
        <property type="entry name" value="Pyr_redox_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02852">
        <property type="entry name" value="Pyr_redox_dim"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000350">
        <property type="entry name" value="Mercury_reductase_MerA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55424">
        <property type="entry name" value="SSF55424"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01350">
        <property type="entry name" value="lipoamide_DH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00076">
        <property type="entry name" value="PYRIDINE_REDOX_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="5 11 13" id="KW-0274">FAD</keyword>
    <keyword evidence="4 13" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="7 11 13" id="KW-0520">NAD</keyword>
    <keyword evidence="11" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6 13 16" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="9 13" id="KW-0676">Redox-active center</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Pyr_redox_2" evidence="15">
        <location>
            <begin position="4"/>
            <end position="329"/>
        </location>
    </feature>
    <feature type="domain" description="Pyr_redox_dim" evidence="14">
        <location>
            <begin position="348"/>
            <end position="457"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="10">
        <location>
            <position position="446"/>
        </location>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="51"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="115"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <begin position="144"/>
            <end position="146"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <begin position="181"/>
            <end position="188"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="204"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="273"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="314"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <begin position="320"/>
            <end position="323"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="disulfide bond" description="Redox-active" evidence="12">
        <location>
            <begin position="42"/>
            <end position="47"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001492"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007532"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012608"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR000350-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRSR" id="PIRSR000350-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRSR" id="PIRSR000350-4"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU003692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF02852"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="Pfam" id="PF07992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="CTQ71580.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="467" mass="48752" checksum="7DDA969ABA426F08" modified="2015-12-09" version="1">MSQYDLVVIGTGPGGYVCAIKAAQLGLKTAVVEKEATLGGTCLNIGCIPSKALLHASEMFHEAGHGFEKLGIKVAKPKLDLPGMMKHKSDVVDANVSGISFLMKKNKIDVHTGMGKILGAGKVEVTDNDGKASVIETKNIVIATGSDVMPLPGVEIDEKQIVSSTGALDIEKVPSKMIVVGGGVIGLELGSVWNRLGAEVTVVEFMPKILGPMDGDISKNFQRILKKQGMAFKLSSKVTGVEKKGKGLAVSVEPAAGGDTEVLEADIVLVAIGRRAYTEGLGLDQAGVVVDDRGRVQIDTHYKTNVDGIYAIGDVVVGPMLAHKAEDEGVAVAEILAGQAGHVNYDVIPGVVYTQPEVASVGKTEEELKAAGVEYKTGKFNFTANGRARAMNATDGFAKVLSDAKTDQVLGVHIVGFGAGEMIHEAAVLMEFGGSAEDLGRTCHAHPTMSEAVKEAAMGAFAKPIHS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABL9</accession>
    <name>A0A0M7ABL9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Zinc transporter ZitB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_02879</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71600.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672395.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02879"/>
    <dbReference type="EnsemblBacteria" id="CTQ71600">
        <property type="protein sequence ID" value="CTQ71600"/>
        <property type="gene ID" value="LAX5112_02879"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008324">
        <property type="term" value="F:cation transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1510.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002524">
        <property type="entry name" value="Cation_efflux"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027469">
        <property type="entry name" value="Cation_efflux_TMD_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01545">
        <property type="entry name" value="Cation_efflux"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161111">
        <property type="entry name" value="SSF161111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="22"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="55"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="80"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="112"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="152"/>
            <end position="169"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="175"/>
            <end position="193"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008114"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ71600.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="222" mass="23403" checksum="E5E8CE94B6BED56D" modified="2015-12-09" version="1">MAGCCGSNAKFDGVSQDYKRRLWLVIALNATMFVVEMAAGHAARSQALQADALDFFGDAITYGISLAVIGASLRTRAIAALFKGGSLLLMGLWVGGSTAYQFLVHGTPKAEIMGAIGFLALAVNLISVLVLVRYKDGDANVRSVWLCSRNDAIGNVAVMLAALGVWGTATGWPDLIVAGLMASLFINSAVQILKQAIAEYKQTDIETGSDHEHGNTPDGVVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABS3</accession>
    <name>A0A0M7ABS3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Flagellar biosynthesis repressor FlbT</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02747</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71183.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672294.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02747"/>
    <dbReference type="EnsemblBacteria" id="CTQ71183">
        <property type="protein sequence ID" value="CTQ71183"/>
        <property type="gene ID" value="LAX5112_02747"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048027">
        <property type="term" value="F:mRNA 5'-UTR binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006402">
        <property type="term" value="P:mRNA catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:1902209">
        <property type="term" value="P:negative regulation of bacterial-type flagellum assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009967">
        <property type="entry name" value="Flagellum_FlbT"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07378">
        <property type="entry name" value="FlbT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0966">Cell projection</keyword>
    <keyword evidence="2" id="KW-0969">Cilium</keyword>
    <keyword evidence="2" id="KW-0282">Flagellum</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="130"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="130"/>
            <end position="159"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71183.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="165" mass="17761" checksum="75BFD5D9DD4C151F" modified="2015-12-09" version="1">MALKVELKPGERIIIGESVITNDNQRTRLFIEGDAPILREKDILTPETADTPAKRVYLAVQLMYLSTDLERVKESYFTLVNDIVKAAPSTIPYVTRISNSIISGSFYKALKEARKLIEYEGTLISHVQTGSAGLSENQSGGTGITAGTGSDSADESRSPAPAGQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABS5</accession>
    <name>A0A0M7ABS5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Putative MscS family protein YkuT</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">ykuT_2</name>
        <name evidence="11" type="ORF">LAX5112_03234</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the MscS (TC 1.A.23) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72585.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03234"/>
    <dbReference type="EnsemblBacteria" id="CTQ72585">
        <property type="protein sequence ID" value="CTQ72585"/>
        <property type="gene ID" value="LAX5112_03234"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008381">
        <property type="term" value="F:mechanosensitive ion channel activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010920">
        <property type="entry name" value="LSM_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006685">
        <property type="entry name" value="MscS_channel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011066">
        <property type="entry name" value="MscS_channel_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011014">
        <property type="entry name" value="MscS_channel_TM-2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023408">
        <property type="entry name" value="MscS_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045276">
        <property type="entry name" value="YbiO_bact"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30460">
        <property type="entry name" value="PTHR30460"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00924">
        <property type="entry name" value="MS_channel"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50182">
        <property type="entry name" value="SSF50182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82689">
        <property type="entry name" value="SSF82689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82861">
        <property type="entry name" value="SSF82861"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10" id="KW-0732">Signal</keyword>
    <keyword evidence="6" id="KW-0346">Stress response</keyword>
    <keyword evidence="4 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 9" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="10">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809385" evidence="10">
        <location>
            <begin position="24"/>
            <end position="756"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="139"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="182"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="223"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="271"/>
            <end position="290"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="296"/>
            <end position="313"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="345"/>
            <end position="366"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="372"/>
            <end position="393"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="431"/>
            <end position="454"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="466"/>
            <end position="489"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="509"/>
            <end position="528"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="534"/>
            <end position="556"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="60"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="729"/>
            <end position="756"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="741"/>
            <end position="756"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008017"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ72585.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="756" mass="82732" checksum="8D0C3B51DBFDDA06" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AC15</accession>
    <name>A0A0M7AC15_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Thiosulfate sulfurtransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02767</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71283.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02767"/>
    <dbReference type="EnsemblBacteria" id="CTQ71283">
        <property type="protein sequence ID" value="CTQ71283"/>
        <property type="gene ID" value="LAX5112_02767"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.250.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001763">
        <property type="entry name" value="Rhodanese-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036873">
        <property type="entry name" value="Rhodanese-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044240">
        <property type="entry name" value="STR4-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47377">
        <property type="entry name" value="PTHR47377"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00581">
        <property type="entry name" value="Rhodanese"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00450">
        <property type="entry name" value="RHOD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52821">
        <property type="entry name" value="SSF52821"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50206">
        <property type="entry name" value="RHODANESE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Rhodanese" evidence="1">
        <location>
            <begin position="22"/>
            <end position="132"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50206"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71283.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="146" mass="15851" checksum="09452C2E3A5EA7BB" modified="2015-12-09" version="1">MFSELGYAGNVDVQTAFTALTDNTQAVLVDVRTQAEWTFVGVPDLRTLGKETIFAEWQSFPPSGLNPAFVQDLSDRLSKKELDPETPIYFLCRSGARSQAAAQAMTQAGYTNCYNVSEGFEGGLDAHAHRGTQSGWKAAGLPWVQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AC73</accession>
    <name>A0A0M7AC73_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Tol-Pal system protein TolB</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">tolB</name>
        <name evidence="9" type="ORF">LAX5112_03196</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">The Tol-Pal system is composed of five core proteins: the inner membrane proteins TolA, TolQ and TolR, the periplasmic protein TolB and the outer membrane protein Pal. They form a network linking the inner and outer membranes and the peptidoglycan layer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 7">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the TolB family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72479.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672633.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03196"/>
    <dbReference type="EnsemblBacteria" id="CTQ72479">
        <property type="protein sequence ID" value="CTQ72479"/>
        <property type="gene ID" value="LAX5112_03196"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007049">
        <property type="term" value="P:cell cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017038">
        <property type="term" value="P:protein import"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.120.10.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00671">
        <property type="entry name" value="TolB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011042">
        <property type="entry name" value="6-blade_b-propeller_TolB-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011659">
        <property type="entry name" value="PD40"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014167">
        <property type="entry name" value="Tol-Pal_TolB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007195">
        <property type="entry name" value="TolB_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07676">
        <property type="entry name" value="PD40"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04052">
        <property type="entry name" value="TolB_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02800">
        <property type="entry name" value="propeller_TolB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="3 7" id="KW-0132">Cell division</keyword>
    <keyword evidence="5 7" id="KW-0574">Periplasm</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0732">Signal</keyword>
    <feature type="domain" description="TolB_N" evidence="8">
        <location>
            <begin position="38"/>
            <end position="144"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009820"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00671"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF04052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ72479.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="449" mass="49486" checksum="AEDA44A3EAB9FBEF" modified="2015-12-09" version="1">MRQIWKQFLGIVGSSARVRGGFVFLFAALTPLPAAALVEIDITQGNVEPLPIALPQFSAEGGDSKLAADMTAVIAADLKRSGLFNPLDPASFIQKNMSVNSTPRFGDWRTISAQALVTGTVTKQADGRLRAEFRLWDVFAAEQMLGQQFYTTPENWRRLAHIIADAVYERITGEKGYFDTRIVFVDETGPKDKRVKRLALMDQDGANVRYLTRGDDLVLTPRFSPTSQEITYMSYAGADPSVYLLNIETGQREIVGNFPGMTFAPRFSPDGQSVVMSLQQGSNANIFKMDLRSRQTTRLTNSAAIDTSPSFSPDSQRIVFESDRGGSQQLYVMSASGGQAQRISFGPGRYSTPVWSPRGDLIAFTKQHQGRFMIGVMRPDGKGERVLTEGYHNEGPAWAPNGRVLVFFRDTPGANGGPQVWTVDLTGYNEQRLETPAFASDPSWSPLID</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AD27</accession>
    <name>A0A0M7AD27_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">ATP synthase gamma chain</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">ATP synthase F1 sector gamma subunit</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="9">F-ATPase gamma subunit</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9 10" type="primary">atpG</name>
        <name evidence="10" type="ORF">LAX5112_02893</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 9">Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.</text>
    </comment>
    <comment type="subunit">
        <text evidence="9">F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a, b and c.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cell membrane</location>
            <topology evidence="9">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the ATPase gamma chain family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71643.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008192076.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02893"/>
    <dbReference type="EnsemblBacteria" id="CTQ71643">
        <property type="protein sequence ID" value="CTQ71643"/>
        <property type="gene ID" value="LAX5112_02893"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045261">
        <property type="term" value="C:proton-transporting ATP synthase complex, catalytic core F(1)"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046933">
        <property type="term" value="F:proton-transporting ATP synthase activity, rotational mechanism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042777">
        <property type="term" value="P:proton motive force-driven plasma membrane ATP synthesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd12151">
        <property type="entry name" value="F1-ATPase_gamma"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00815">
        <property type="entry name" value="ATP_synth_gamma_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035968">
        <property type="entry name" value="ATP_synth_F1_ATPase_gsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000131">
        <property type="entry name" value="ATP_synth_F1_gsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023632">
        <property type="entry name" value="ATP_synth_F1_gsu_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11693">
        <property type="entry name" value="PTHR11693"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00231">
        <property type="entry name" value="ATP-synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00126">
        <property type="entry name" value="ATPASEGAMMA"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52943">
        <property type="entry name" value="SSF52943"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01146">
        <property type="entry name" value="ATPsyn_F1gamma"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00153">
        <property type="entry name" value="ATPASE_GAMMA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 9" id="KW-0066">ATP synthesis</keyword>
    <keyword evidence="9" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7 9" id="KW-0139">CF(1)</keyword>
    <keyword evidence="4 9" id="KW-0375">Hydrogen ion transport</keyword>
    <keyword evidence="5 9" id="KW-0406">Ion transport</keyword>
    <keyword evidence="6 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 9" id="KW-0813">Transport</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003456"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007681"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022781"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023196"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023310"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00815"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ71643.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="294" mass="31947" checksum="0E95BBBB3FDC49D6" modified="2015-12-09" version="1">MPSLKDLRNRIASVKATQKITKAMQMVAAAKLRRAQEAAEAARPYAERMESVLANLAVAFEGRDDAPKLMSGTGNDQVHLLVVATAERGLCGGFNTNIAKLAREKAKSLIGQGKTVKILCVGKKGFDAIKRDLGQHVIETIELRGVKNVGFSNADEIGRKILSMYENGEFDVCTLFYATFQSVIAQVPTAQQLIPAHFEASEGTDEGGASAVYEYEPDEAEILADLLPRNISIQVFRALLENAASEQGARMSAMDNATRNAGDMIDKLTIKYNRQRQAQITTELIEIISGAEAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADN5</accession>
    <name>A0A0M7ADN5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Zinc metalloprotease</fullName>
            <ecNumber evidence="9">3.4.24.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">mmpA</name>
        <name evidence="11" type="ORF">LAX5112_03457</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 9">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 9">Belongs to the peptidase M50B family.</text>
    </comment>
    <dbReference type="EC" id="3.4.24.-" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73198.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008193007.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03457"/>
    <dbReference type="EnsemblBacteria" id="CTQ73198">
        <property type="protein sequence ID" value="CTQ73198"/>
        <property type="gene ID" value="LAX5112_03457"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004222">
        <property type="term" value="F:metalloendopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.42.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001478">
        <property type="entry name" value="PDZ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041489">
        <property type="entry name" value="PDZ_6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036034">
        <property type="entry name" value="PDZ_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004387">
        <property type="entry name" value="Pept_M50_Zn"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008915">
        <property type="entry name" value="Peptidase_M50"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42837">
        <property type="entry name" value="PTHR42837"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17820">
        <property type="entry name" value="PDZ_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02163">
        <property type="entry name" value="Peptidase_M50"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00228">
        <property type="entry name" value="PDZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50156">
        <property type="entry name" value="SSF50156"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00054">
        <property type="entry name" value="TIGR00054"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50106">
        <property type="entry name" value="PDZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 9 11" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9 11" id="KW-0482">Metalloprotease</keyword>
    <keyword evidence="11" id="KW-0645">Protease</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6 9" id="KW-0862">Zinc</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="7"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="115"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="304"/>
            <end position="325"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="351"/>
            <end position="369"/>
        </location>
    </feature>
    <feature type="domain" description="PDZ" evidence="10">
        <location>
            <begin position="135"/>
            <end position="178"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU362031"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50106"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ73198.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="378" mass="41567" checksum="C53A2CB3FE4ADC9C" modified="2015-12-09" version="1">MEIFGSAYDLLIGYMAPFLFVLTIVVFFHELGHFAVARWCNVKVDAFSVGFGRELFGWYDKHGTRWKVSLIPLGGYVKFAGDENAASVPDREYIASMSEEERRTAFIAKPVWQRAAIVAAGPIANFILAVIIFAGIFMAYGKPQLLPVVSTVIEGSAAETAGIQTGDRILSINDKPLSYFEDLKWTVRHNPDQPLVLGIERDGAELTATVVPVYVTDVNQFGVEYREPRIGVAIASDENTRILKQLGVGGALWEGVLRTYKIIYDTINFIGEMFAGEQSPQQLGGPIQIAQVSGTVAQFGLIELISLAGFLSVSIGFINLLPIPILDGGHLVFYAAEAIRGKPLNEKVQEVGFRIGLGLVLMLMVFATWNDIWRLMSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADR1</accession>
    <name>A0A0M7ADR1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03233</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72582.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72582">
        <property type="protein sequence ID" value="CTQ72582"/>
        <property type="gene ID" value="LAX5112_03233"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ72582.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="58" mass="6595" checksum="7ECAAFAD0CF81544" modified="2015-12-09" version="1">MTLRKFRIFLDILRRILSEIAIFLNLAAGTTPVEQTGEDIKPGLPRTYVPSSMLSFQQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADW0</accession>
    <name>A0A0M7ADW0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Xaa-Pro dipeptidase</fullName>
            <ecNumber evidence="3">3.4.13.9</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">pepQ_4</name>
        <name evidence="3" type="ORF">LAX5112_03251</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.4.13.9" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72632.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672671.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03251"/>
    <dbReference type="EnsemblBacteria" id="CTQ72632">
        <property type="protein sequence ID" value="CTQ72632"/>
        <property type="gene ID" value="LAX5112_03251"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102009">
        <property type="term" value="F:proline dipeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.350.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029149">
        <property type="entry name" value="Creatin/AminoP/Spt16_NTD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036005">
        <property type="entry name" value="Creatinase/aminopeptidase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000587">
        <property type="entry name" value="Creatinase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000994">
        <property type="entry name" value="Pept_M24"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01321">
        <property type="entry name" value="Creatinase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00557">
        <property type="entry name" value="Peptidase_M24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53092">
        <property type="entry name" value="SSF53092"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55920">
        <property type="entry name" value="SSF55920"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0224">Dipeptidase</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0645">Protease</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Creatinase_N" evidence="2">
        <location>
            <begin position="74"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_M24" evidence="1">
        <location>
            <begin position="229"/>
            <end position="438"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00557"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01321"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ72632.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="458" mass="51060" checksum="ED56B99F499B4917" modified="2015-12-09" version="1">MNTEHFGRHRRKIMPAVLPDHPGDAAGYEALSAYATEKASALNRHVLGYGELAETEWSALALAAPDLDAVREYRLQRIRQQLQSFDLSAAILCDPLNVRYATDSTNMQVWSTHNAVRYTLVTLNGPVIAFDFHNCEHLSAHNMLVDEVRHGVPWFYFESGPRSAELAQKWADELADLIKTYCGPNARVAVDKCRREGVAALQGHSLKLHDGEEVMELARAVKCSDEIKAMRRSIAACEAAMSEMEAALCPGMTEWDLWALLHAGNIRRGGEWIETHLLASGPRTNPWFQEASAREIQSGELVAFDTDLVGPYGMCCDISRTWLCGDRQPTNEQKSLYQMAVDQIEANIEMLAPGRSFHELSHSAKNLPEDYQANRYSVLFHGVGLCDEYPAVPYPADWASGGYDGVLVPGMVVCVESYVGRHGGHEGVKLEEQLLITETGYERLSTYPYDARLMGRQI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AE63</accession>
    <name>A0A0M7AE63_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Phytoene desaturase (Neurosporene-forming)</fullName>
            <ecNumber evidence="6">1.3.99.28</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">crtI</name>
        <name evidence="6" type="ORF">LAX5112_02974</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1 4">Carotenoid biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 4">Belongs to the carotenoid/retinoid oxidoreductase family.</text>
    </comment>
    <dbReference type="EC" id="1.3.99.28" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71924.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672480.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02974"/>
    <dbReference type="EnsemblBacteria" id="CTQ71924">
        <property type="protein sequence ID" value="CTQ71924"/>
        <property type="gene ID" value="LAX5112_02974"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00074">
        <property type="reaction ID" value="UER00135"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016117">
        <property type="term" value="P:carotenoid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002937">
        <property type="entry name" value="Amino_oxidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014105">
        <property type="entry name" value="Carotenoid/retinoid_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008150">
        <property type="entry name" value="Phytoene_DH_bac_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01593">
        <property type="entry name" value="Amino_oxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02734">
        <property type="entry name" value="crtI_fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00982">
        <property type="entry name" value="PHYTOENE_DH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0125">Carotenoid biosynthesis</keyword>
    <keyword evidence="4 6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Amino_oxidase" evidence="5">
        <location>
            <begin position="29"/>
            <end position="502"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006046"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022746"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU362075"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF01593"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ71924.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="521" mass="57061" checksum="11D4CE38B7C7E11D" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEZ1</accession>
    <name>A0A0M7AEZ1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">LAX5112_03100</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72214.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03100"/>
    <dbReference type="EnsemblBacteria" id="CTQ72214">
        <property type="protein sequence ID" value="CTQ72214"/>
        <property type="gene ID" value="LAX5112_03100"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000014">
        <property type="entry name" value="PAS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000700">
        <property type="entry name" value="PAS-assoc_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035965">
        <property type="entry name" value="PAS-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013656">
        <property type="entry name" value="PAS_4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08448">
        <property type="entry name" value="PAS_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00091">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55785">
        <property type="entry name" value="SSF55785"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00229">
        <property type="entry name" value="sensory_box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50113">
        <property type="entry name" value="PAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 4" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PAC" evidence="7">
        <location>
            <begin position="250"/>
            <end position="302"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="5">
        <location>
            <begin position="315"/>
            <end position="539"/>
        </location>
    </feature>
    <feature type="domain" description="Response regulatory" evidence="6">
        <location>
            <begin position="562"/>
            <end position="678"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="4">
        <location>
            <position position="612"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50113"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ72214.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="680" mass="74754" checksum="738A683AAA6E6E64" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFA4</accession>
    <name>A0A0M7AFA4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">ATP-dependent Clp protease ATP-binding subunit ClpX</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6 9" type="primary">clpX</name>
        <name evidence="9" type="ORF">LAX5112_03501</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Component of the ClpX-ClpP complex. Forms a hexameric ring that, in the presence of ATP, binds to fourteen ClpP subunits assembled into a disk-like structure with a central cavity, resembling the structure of eukaryotic proteasomes.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6 7">Belongs to the ClpX chaperone family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73317.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
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    <dbReference type="EnsemblBacteria" id="CTQ73317">
        <property type="protein sequence ID" value="CTQ73317"/>
        <property type="gene ID" value="LAX5112_03501"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
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        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
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        <property type="term" value="F:ATP hydrolysis activity"/>
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        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140662">
        <property type="term" value="F:ATP-dependent protein folding chaperone"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008233">
        <property type="term" value="F:peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046983">
        <property type="term" value="F:protein dimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051082">
        <property type="term" value="F:unfolded protein binding"/>
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        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.20.220.10">
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
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        <property type="entry name" value="ATPase_AAA_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019489">
        <property type="entry name" value="Clp_ATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004487">
        <property type="entry name" value="Clp_protease_ATP-bd_su_ClpX"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046425">
        <property type="entry name" value="ClpX_bact"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010603">
        <property type="entry name" value="Znf_CppX_C4"/>
    </dbReference>
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        <property type="entry name" value="Znf_CppX_C4_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07724">
        <property type="entry name" value="AAA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10431">
        <property type="entry name" value="ClpB_D2-small"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="zf-C4_ClpX"/>
        <property type="match status" value="1"/>
    </dbReference>
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    </dbReference>
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    </dbReference>
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    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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    <keyword evidence="4 6 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 6 7" id="KW-0143">Chaperone</keyword>
    <keyword evidence="9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1 6 7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-0645">Protease</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6 7" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="ClpX-type ZB" evidence="8">
        <location>
            <begin position="3"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6 7">
        <location>
            <position position="15"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
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        <location>
            <position position="18"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
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        </ligand>
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        <location>
            <position position="37"/>
        </location>
        <ligand>
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        </ligand>
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        <location>
            <position position="40"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
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        <location>
            <begin position="119"/>
            <end position="126"/>
        </location>
        <ligand>
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            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
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        </source>
    </evidence>
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        <source>
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        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
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        <source>
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        <source>
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        </source>
    </evidence>
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            <dbReference type="PROSITE" id="PS51902"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="EMBL" id="CTQ73317.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
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        </source>
    </evidence>
    <sequence length="421" mass="46431" checksum="A79AE182FA0E6CBC" modified="2015-12-09" version="1">MTKASGSDSKNTLYCSFCGKSQHEVRKLIAGPTVFICDECVELCMDIIREENKSSLVKSRDGIPTPQEIRDVLDDYVIGQGSAKKVLSVAVHNHYKRLNHASKNNDVELAKSNILLVGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQSADYNVERAQRGIVYIDEIDKISRKADNPSITRDVSGEGVQQALLKIMEGTVASVPPQGGRKHPQQEFLQVDTTNMLFICGGAFAGLDKIISDRGTQTSIGFQAQVHAPEDRRIGELFSELEPEDLLKFGLIPEFVGRLPVIATLEDLDEDALITILTEPKNALVKQYQRLFEMEQVELSFHEEALRAIANRAIERKTGARGLRSILESILLDTMYELPGLKGVKEVVISPEVVKGEARPLYIYEDREETSATSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AG41</accession>
    <name>A0A0M7AG41_9HYPH</name>
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        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
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        <name evidence="1" type="ORF">LAX5112_03581</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
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    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
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    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ73571.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="119" mass="13168" checksum="BC86744EB3D8CB8D" modified="2015-12-09" version="1">MNRNEFDAYCKALPATANVVQWGNASVWKVGGKIFAICSGWGEGTHEKFSFKCSDISYSLLIQQDGVIPAPYLARAKWVQREDDSSISDDDLKAYISAAHEIVARKLSKKLQKDLGLAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AG54</accession>
    <name>A0A0M7AG54_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">D-amino acid dehydrogenase small subunit</fullName>
            <ecNumber evidence="2">1.4.99.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">dadA_2</name>
        <name evidence="2" type="ORF">LAX5112_03241</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.4.99.1" evidence="2"/>
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        <property type="protein sequence ID" value="CTQ72604.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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    </dbReference>
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        <property type="protein sequence ID" value="CTQ72604"/>
        <property type="gene ID" value="LAX5112_03241"/>
    </dbReference>
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        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
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        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="match status" value="2"/>
    </dbReference>
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        <property type="entry name" value="FAD-dep_OxRdtase"/>
    </dbReference>
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        <property type="entry name" value="FAD/NAD-bd_sf"/>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DAO" evidence="1">
        <location>
            <begin position="5"/>
            <end position="395"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01266"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72604.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="413" mass="44535" checksum="DCEB52542241C346" modified="2015-12-09" version="1">MSKPDVTIVGAGIIGLATAANLLQRGYRVTILDREGPAAGASQGNAGAIAWTDVAPLASPGLWKQAIKWLMDPLGPLTVRPAYAVKILPWMLRFMAASNHSQMKRSTEALAALNAEAWPSWERLWRVSGTHNQVRNDGCLELFDTVSSLKDAHLGWEEQRAFGIDIQELDLAAIRDMEPALSDRVVGGALVPEWAQVDDPKLLCLSLADWLKSQGVVFDVGEVVGVQSKPSGVLVTLADGRTVHPDRLVIACGAWSKKLAAQLGDKIPLDTERGYNITIPEPGVTVNRFIMLPGHGFVLSPLSTGLRVGGAVEFGGLDLPENWKRVDAMVAKARRFFPDLKTEGGKRWMGFRPSIPDSLPVIGAAPQADGVYYAFGHAHHGLTEAAVTGEMITDMIDGATPSVDPNPFRADRF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AI10</accession>
    <name>A0A0M7AI10_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Bacillibactin transport regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">btr_1</name>
        <name evidence="3" type="ORF">LAX5112_03889</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74519.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673194.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74519">
        <property type="protein sequence ID" value="CTQ74519"/>
        <property type="gene ID" value="LAX5112_03889"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="36"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="67"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="93"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="115"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="157"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="186"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="domain" description="HTH araC/xylS-type" evidence="2">
        <location>
            <begin position="235"/>
            <end position="335"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ74519.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="340" mass="37403" checksum="88F6553BA55E750B" modified="2015-12-09" version="1">MISIPVSFLLAALFLGLLLSVVFWRGLPRIARLCFALLLALLVLETVFVGLRFAFGIFSFLPLQRVLPLWIAPLAFLSFLSLTEALERLRKSFLFHGVIASVAAMLVLFPQEARVLPDVVIALSFTAYAVLLARHWHRGPDELSQIPVQLTGRWHRIEAVVLATMIATLIVDGGIAVLFAHSEDRAAAWLVSLATLGLITTVAAVLMWVNLGAKGGLRAAARPALNGGNEKIVQKAHSVLVEQELFRDTGLTATRLARRVGVPDRELSRAINAGKGQSVSQFVNHLRVEEAARLLTTTDAPATQVMEKAGFLTRSNFYREFQKRYGMPPGDYRKKMQAAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIB2</accession>
    <name>A0A0M7AIB2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Arylmalonate decarboxylase</fullName>
            <ecNumber evidence="1">4.1.1.76</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03991</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="4.1.1.76" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74828.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673283.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03991"/>
    <dbReference type="EnsemblBacteria" id="CTQ74828">
        <property type="protein sequence ID" value="CTQ74828"/>
        <property type="gene ID" value="LAX5112_03991"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047436">
        <property type="term" value="F:arylmalonate decarboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026286">
        <property type="entry name" value="MaiA/AMDase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR40267">
        <property type="entry name" value="PTHR40267"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17645">
        <property type="entry name" value="Amdase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF015736">
        <property type="entry name" value="MI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0456">Lyase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ74828.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="246" mass="25683" checksum="65A6463DB9DB8581" modified="2015-12-09" version="1">MQLSFETDAGLAHKAALGLIVLQADETIENEFRPLFDQDGVTLNHTRIESAPEVTSETLMRMKSQLTGTAALLPGARDLDVIGYACTSASTVIGSDAVAAAVRKAHPTTKVTNPAAAVLAALEHLNAKKIGVVTPYIAEVSEAVVSLLKDNSLTVANLGSFGQSEEAVVARISPASVEEAICSVGSAPEIDAVFASCTNLRTFPVLKACEAKLGKPVISSNSALAWHMMLLAGLETKGRGPGRLFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIC5</accession>
    <name>A0A0M7AIC5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">HTH-type transcriptional repressor SmtB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">smtB</name>
        <name evidence="2" type="ORF">LAX5112_03831</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74341.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673148.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74341">
        <property type="protein sequence ID" value="CTQ74341"/>
        <property type="gene ID" value="LAX5112_03831"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001845">
        <property type="entry name" value="HTH_ArsR_DNA-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00778">
        <property type="entry name" value="HTHARSR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00418">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50987">
        <property type="entry name" value="HTH_ARSR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH arsR-type" evidence="1">
        <location>
            <begin position="18"/>
            <end position="111"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50987"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74341.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="129" mass="13867" checksum="E6A0FC6EC134CC32" modified="2015-12-09" version="1">MSDQVCPHTASGENTSGLSGCESLAAQFRALGHPARLAILRRLAGEKEACCGEIVSALPLAQSTVSQHLQVLKDAGFLTCDTRGRNCHYVLNWDQISKTQEASDAFWKLLNSEHDNGVLSAVNELAANE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJB3</accession>
    <name>A0A0M7AJB3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO</fullName>
            <ecNumber evidence="10">2.1.1.74</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10">Folate-dependent tRNA (uracil-5-)-methyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="10">Folate-dependent tRNA(M-5-U54)-methyltransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="10 12" type="primary">trmFO</name>
        <name evidence="12" type="ORF">LAX5112_04063</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>(6R)-5,10-methylene-5,6,7,8-tetrahydrofolate + H(+) + NADH + uridine(54) in tRNA = (6S)-5,6,7,8-tetrahydrofolate + 5-methyluridine(54) in tRNA + NAD(+)</text>
            <dbReference type="Rhea" id="RHEA:16873"/>
            <dbReference type="Rhea" id="RHEA-COMP:10167"/>
            <dbReference type="Rhea" id="RHEA-COMP:10193"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15636"/>
            <dbReference type="ChEBI" id="CHEBI:57453"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:65315"/>
            <dbReference type="ChEBI" id="CHEBI:74447"/>
            <dbReference type="EC" id="2.1.1.74"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>(6R)-5,10-methylene-5,6,7,8-tetrahydrofolate + H(+) + NADPH + uridine(54) in tRNA = (6S)-5,6,7,8-tetrahydrofolate + 5-methyluridine(54) in tRNA + NADP(+)</text>
            <dbReference type="Rhea" id="RHEA:62372"/>
            <dbReference type="Rhea" id="RHEA-COMP:10167"/>
            <dbReference type="Rhea" id="RHEA-COMP:10193"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15636"/>
            <dbReference type="ChEBI" id="CHEBI:57453"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="ChEBI" id="CHEBI:65315"/>
            <dbReference type="ChEBI" id="CHEBI:74447"/>
            <dbReference type="EC" id="2.1.1.74"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 10">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="10">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="10">Belongs to the MnmG family. TrmFO subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.74" evidence="10"/>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ74969.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673345.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04063"/>
    <dbReference type="EnsemblBacteria" id="CTQ74969">
        <property type="protein sequence ID" value="CTQ74969"/>
        <property type="gene ID" value="LAX5112_04063"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030698">
        <property type="term" value="F:5,10-methylenetetrahydrofolate-dependent tRNA (m5U54) methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047151">
        <property type="term" value="F:methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase (FADH2-oxidizing) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01037">
        <property type="entry name" value="TrmFO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002218">
        <property type="entry name" value="MnmG-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040131">
        <property type="entry name" value="MnmG_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004417">
        <property type="entry name" value="TrmFO"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11806">
        <property type="entry name" value="PTHR11806"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11806:SF2">
        <property type="entry name" value="PTHR11806:SF2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01134">
        <property type="entry name" value="GIDA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00137">
        <property type="entry name" value="gid_trmFO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 10" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7 10" id="KW-0274">FAD</keyword>
    <keyword evidence="4 10" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="3 10 12" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="9 10" id="KW-0520">NAD</keyword>
    <keyword evidence="8 10" id="KW-0521">NADP</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 10 12" id="KW-0808">Transferase</keyword>
    <keyword evidence="6 10" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="GIDA" evidence="11">
        <location>
            <begin position="4"/>
            <end position="376"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <begin position="8"/>
            <end position="13"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01037"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF01134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ74969.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="472" mass="51002" checksum="6B66B6F8A9916463" modified="2015-12-09" version="1">MPPIHVIGGGLAGSEAAWQIAKAGFDVVLHEMRPVRKTEAHQTDGLAELVCSNSFRSDDSEQNAVGLIHHELRQLGSLIMACADANQVPAGSALAVDRHGFSDAVTKALEEHPRITISRDEVAGLPPEDWEKVIIATGPLTSPALSEAVLAKSGEDALAFFDAIAPIVHFDSIDLDKAWFQSRYDKVGPGGTGKDYLNCPLDKQQYEAFIDALIEGDTADFKEWEENTPYFDGCLPIEVMAARGRETLRHGPMKPMGLTNAHNPDVKAYAVVQLRQDNALGTLYNMVGFQTKLKYGAQGDIFKMIPGLENAQFARLGGLHRNTFLNSPKVLDDTLRLKADPRLRFAGQITGCEGYVESASVGCMAGLFAVMEAKGQDIITPPQTTAMGALLGHITGGHISRDDGAGKPRSFQPMNVNFGLFPLVEAPTKDADGKRIKGKEKSKAKKLAMTQRAKADFAAWQAEIGPVREAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKK9</accession>
    <name>A0A0M7AKK9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Zinc-type alcohol dehydrogenase-like protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04318</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000022">
        <property type="protein sequence ID" value="CTQ75658.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75658">
        <property type="protein sequence ID" value="CTQ75658"/>
        <property type="gene ID" value="LAX5112_04318"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013149">
        <property type="entry name" value="ADH-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011032">
        <property type="entry name" value="GroES-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020843">
        <property type="entry name" value="PKS_ER"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00107">
        <property type="entry name" value="ADH_zinc_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00829">
        <property type="entry name" value="PKS_ER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50129">
        <property type="entry name" value="SSF50129"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PKS_ER" evidence="1">
        <location>
            <begin position="63"/>
            <end position="368"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75658.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="373" mass="39680" checksum="9509350B14DF76F6" modified="2015-12-09" version="1">MGAAMRQYAGETNLFSGSVLFAHHINAQRPTNRPPAETKSRNKDMKAAYYEKNGPASEVIIVGDLDDPKPAAGEVLVQVATSAPNPSDVKSRAGARGPMAFERIIPHSDGAGRIVAVGEGVNEERIGERVWLWNAAWKRPHGSNATMVALHEEQAVYLPTEASFEAGACLGIPAMTAHRCLFADGPIDGQDILVTGGAGTVGSYAIQMAKLRGARVFTTVSSEEKAEHARKMGADVVLNYRTDDVAAAILDATDGKGVDRIVEVEFGGNLSVTQKVLAQNGTVAAYGSMADPEPKLPFYPIMFAGQTLRMVLVYVLPEAARTAAVVDITGWLTNNELQHPVARTFSLDQTAEAHAFVEAGTKIGTTVIKVADL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKW5</accession>
    <name>A0A0M7AKW5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Imidazole glycerol phosphate synthase subunit HisH</fullName>
            <ecNumber evidence="9">4.3.2.10</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">IGP synthase glutaminase subunit</fullName>
            <ecNumber evidence="9">3.5.1.2</ecNumber>
        </alternativeName>
        <alternativeName>
            <fullName evidence="9">IGP synthase subunit HisH</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="9">ImGP synthase subunit HisH</fullName>
            <shortName evidence="9">IGPS subunit HisH</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="12" type="primary">hisH1</name>
        <name evidence="9" type="synonym">hisH</name>
        <name evidence="12" type="ORF">LAX5112_03809</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 9">
            <text>5-[(5-phospho-1-deoxy-D-ribulos-1-ylimino)methylamino]-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamide + L-glutamine = 5-amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamide + D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate + H(+) + L-glutamate</text>
            <dbReference type="Rhea" id="RHEA:24793"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:58278"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="ChEBI" id="CHEBI:58475"/>
            <dbReference type="ChEBI" id="CHEBI:58525"/>
            <dbReference type="EC" id="4.3.2.10"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2 9">
            <text>H2O + L-glutamine = L-glutamate + NH4(+)</text>
            <dbReference type="Rhea" id="RHEA:15889"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="EC" id="3.5.1.2"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3 9">Amino-acid biosynthesis; L-histidine biosynthesis; L-histidine from 5-phospho-alpha-D-ribose 1-diphosphate: step 5/9.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4 9">Heterodimer of HisH and HisF.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EC" id="4.3.2.10" evidence="9"/>
    <dbReference type="EC" id="3.5.1.2" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74244.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008195236.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03809"/>
    <dbReference type="EnsemblBacteria" id="CTQ74244">
        <property type="protein sequence ID" value="CTQ74244"/>
        <property type="gene ID" value="LAX5112_03809"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00031">
        <property type="reaction ID" value="UER00010"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004359">
        <property type="term" value="F:glutaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000107">
        <property type="term" value="F:imidazoleglycerol-phosphate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006541">
        <property type="term" value="P:glutamine metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000105">
        <property type="term" value="P:histidine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01748">
        <property type="entry name" value="GATase1_IGP_Synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00278">
        <property type="entry name" value="HisH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017926">
        <property type="entry name" value="GATASE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010139">
        <property type="entry name" value="Imidazole-glycPsynth_HisH"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42701">
        <property type="entry name" value="PTHR42701"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00117">
        <property type="entry name" value="GATase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000495">
        <property type="entry name" value="Amidotransf_hisH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="SSF52317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01855">
        <property type="entry name" value="IMP_synth_hisH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 9" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="9" id="KW-0315">Glutamine amidotransferase</keyword>
    <keyword evidence="12" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="7 9" id="KW-0368">Histidine biosynthesis</keyword>
    <keyword evidence="6 9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="8 9" id="KW-0456">Lyase</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="12" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="GATase" evidence="11">
        <location>
            <begin position="6"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="9 10">
        <location>
            <position position="88"/>
        </location>
    </feature>
    <feature type="active site" evidence="9 10">
        <location>
            <position position="197"/>
        </location>
    </feature>
    <feature type="active site" evidence="9 10">
        <location>
            <position position="199"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000619"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001062"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011152"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00278"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR000495-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF00117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ74244.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="217" mass="23812" checksum="CFB9D5898792421E" modified="2015-12-09" version="1">MTIAIIDYGSGNLRSAEKAFERAARAHAHVPDVIVTADPDRVRAADRIVLPGVGAFADCKRGLWAVDGMPDALEEAVHKQGKPFFGICVGMQLMASRGLEFETIDGFDWISGDVTEMKPADQTLKIPHMGWNTIDVSSDSHPVFKGIETGPNGLHAYFVHSYHFSCANDADRLATFDYAGTFTAMVARDNMIGTQFHPEKSQRLGLELIANFLDWTP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALE6</accession>
    <name>A0A0M7ALE6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Flagellar assembly protein H</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_04202</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75361.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673436.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04202"/>
    <dbReference type="EnsemblBacteria" id="CTQ75361">
        <property type="protein sequence ID" value="CTQ75361"/>
        <property type="gene ID" value="LAX5112_04202"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018035">
        <property type="entry name" value="Flagellar_FliH/T3SS_HrpE"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02108">
        <property type="entry name" value="FliH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0966">Cell projection</keyword>
    <keyword evidence="4" id="KW-0969">Cilium</keyword>
    <keyword evidence="4" id="KW-0282">Flagellum</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <feature type="domain" description="FliH" evidence="3">
        <location>
            <begin position="85"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="222"/>
            <end position="243"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF02108"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ75361.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="243" mass="26698" checksum="43C55CD504B02405" modified="2015-12-09" version="1">MRHEAGTYTRLGTMTNPSKFLFNTDFAEPEEPEVVEPPKPEIPMMPVADHKAQLQKAKAQAFEEGRVQALKDLQTKQETLLTEEVGHLVAAVGRVLETIDDSVANQEKDAVGLAFLVARRLCAHLIARQPLAETVALVSECLGPLRRAPHLVIRVAERDVEVLKAKVDPIIHEKGFEGRLVILGEPEIARGDCHIEWADGGIRRDRKALEAEIDGSIRAYLKAGRTPKPAPKADGASEKDTEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALT8</accession>
    <name>A0A0M7ALT8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ParA-like protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03907</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74574.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673210.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03907"/>
    <dbReference type="EnsemblBacteria" id="CTQ74574">
        <property type="protein sequence ID" value="CTQ74574"/>
        <property type="gene ID" value="LAX5112_03907"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002586">
        <property type="entry name" value="CobQ/CobB/MinD/ParA_Nub-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01656">
        <property type="entry name" value="CbiA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CbiA" evidence="1">
        <location>
            <begin position="4"/>
            <end position="181"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01656"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74574.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="208" mass="22549" checksum="E3885ADBBD600A7B" modified="2015-12-09" version="1">MRKILVVNSKGGCGKTTIATNLAVALAARGEDVALADADRQKSSLSWVKRRPKKMTSIEGLDWTKESSIGDKSKGLDAVVIDGPGGLRSELAKTLIAEASDILVPVLASAFDWNATLKFLDGISEIKRVRKGKAEIHVIANRINRRSTQVGELEQTLSKKGYPILCRITDRVAYAKHAAAGSGIFDYSDAQSHEIRGQWHPLLQAVDT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALZ3</accession>
    <name>A0A0M7ALZ3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Proline porter II</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">proP</name>
        <name evidence="7" type="ORF">LAX5112_04161</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75250.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673412.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04161"/>
    <dbReference type="EnsemblBacteria" id="CTQ75250">
        <property type="protein sequence ID" value="CTQ75250"/>
        <property type="gene ID" value="LAX5112_04161"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005828">
        <property type="entry name" value="MFS_sugar_transport-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00083">
        <property type="entry name" value="Sugar_tr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="21"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="48"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="84"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="108"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="149"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="184"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="237"/>
            <end position="261"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="273"/>
            <end position="292"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="299"/>
            <end position="320"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="326"/>
            <end position="350"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="362"/>
            <end position="385"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="391"/>
            <end position="412"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="6">
        <location>
            <begin position="12"/>
            <end position="417"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ75250.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="427" mass="45713" checksum="BDFC07F2AF3F2524" modified="2015-12-09" version="1">MTTQIKQSRGRSILAAASGNVLEWYDFTVYGFMASTIAVLFFPSEDKVASLLSAFAVLAVGYAARPVGSLLFGHIGDRFGRKPVLIASVMMMGLGSVAIAALPTYDQIGITAAVLLVLIRIAQGISVAGEYTTSGVLIVEQAPADRRALTGSWIAFAMMWGCVLGSAVPTLISNLLTDEQMHSWGWRIPFVIGGLIAFLSTVLRRHLTEAAPKAQEWELGSPVLHTLKRFPGLIFEMVVLVIPVSVIYFVIFVYAVTYIGSEPGFTSAEALDITTVNLVIMALFVPVCGYIADKVGLRAAMMGAAISAIVLALPCWWLMLSTKLELVFIGQLGLTLASTAGWALSITALTQMAPQHLRCSTVAIGYNICLAVFGGTTPFVATYLVHETGDTFAPAYYIVLVSILSAIVIWRIPKHIARAGPMSVASE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMQ8</accession>
    <name>A0A0M7AMQ8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">D-galactonate dehydratase</fullName>
            <ecNumber evidence="2">4.2.1.6</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">dgoD_2</name>
        <name evidence="2" type="ORF">LAX5112_04108</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="4.2.1.6" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ75073.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673367.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04108"/>
    <dbReference type="EnsemblBacteria" id="CTQ75073">
        <property type="protein sequence ID" value="CTQ75073"/>
        <property type="gene ID" value="LAX5112_04108"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008869">
        <property type="term" value="F:galactonate dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009063">
        <property type="term" value="P:cellular amino acid catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.390.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036849">
        <property type="entry name" value="Enolase-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029017">
        <property type="entry name" value="Enolase-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029065">
        <property type="entry name" value="Enolase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018110">
        <property type="entry name" value="Mandel_Rmase/mucon_lact_enz_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013342">
        <property type="entry name" value="Mandelate_racemase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034593">
        <property type="entry name" value="Mandelate_racemase_DgoD-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013341">
        <property type="entry name" value="Mandelate_racemase_N_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48080">
        <property type="entry name" value="PTHR48080"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13378">
        <property type="entry name" value="MR_MLE_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02746">
        <property type="entry name" value="MR_MLE_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00922">
        <property type="entry name" value="MR_MLE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51604">
        <property type="entry name" value="SSF51604"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54826">
        <property type="entry name" value="SSF54826"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00908">
        <property type="entry name" value="MR_MLE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MR_MLE" evidence="1">
        <location>
            <begin position="125"/>
            <end position="230"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00922"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75073.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="368" mass="41324" checksum="9BD08E13F2390846" modified="2015-12-09" version="1">MKIQSIETFTNEFVCFTRVTTDSGETGWGQVAPYYADITAEVVHRQVAPYALGEDALDIDHLMDIIPDREHKFPGSYLRRAMGGLDTALYDLRGKIEGKPVCELLGGTPGKVRAYGSSMKRDITAQDEADRLKRHQDERGFTAFKFRIGAECGRDQDEWPGRTEEIVPLMRKSFADDTALLVDANSCYSPGKAIEVGRFLEANGISHYEEPCPYWHFDQTKQVTDALDIDVTGGEQDCSMVDWKRMIDHKVVDIIQPDICYLGGMVRTMKVAQMAHEAGIPCTPHAANLSLVTLFTMHLLRAIPNAGKYLEFSIEEEDYYPWQYDLFVKSPFDIIDGNAIVTDAPGWGVEVNPEWLAKSTYKISTLEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMV7</accession>
    <name>A0A0M7AMV7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">V-type ATP synthase alpha chain</fullName>
            <ecNumber evidence="7">7.1.2.2</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">V-ATPase subunit A</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="primary">ntpA</name>
        <name evidence="7" type="synonym">atpA</name>
        <name evidence="11" type="ORF">LAX5112_04426</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>ATP + 4 H(+)(in) + H2O = ADP + 5 H(+)(out) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:57720"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="7.1.2.2"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1 7">Belongs to the ATPase alpha/beta chains family.</text>
    </comment>
    <dbReference type="EC" id="7.1.2.2" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ75987.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673641.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000024.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04426"/>
    <dbReference type="EnsemblBacteria" id="CTQ75987">
        <property type="protein sequence ID" value="CTQ75987"/>
        <property type="gene ID" value="LAX5112_04426"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046933">
        <property type="term" value="F:proton-transporting ATP synthase activity, rotational mechanism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046961">
        <property type="term" value="F:proton-transporting ATPase activity, rotational mechanism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042777">
        <property type="term" value="P:proton motive force-driven plasma membrane ATP synthesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1140.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00309">
        <property type="entry name" value="ATP_synth_A_arch"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031686">
        <property type="entry name" value="ATP-synth_a_Xtn"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020003">
        <property type="entry name" value="ATPase_a/bsu_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004100">
        <property type="entry name" value="ATPase_F1/V1/A1_a/bsu_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000194">
        <property type="entry name" value="ATPase_F1/V1/A1_a/bsu_nucl-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024034">
        <property type="entry name" value="ATPase_F1/V1_b/a_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022878">
        <property type="entry name" value="V-ATPase_asu"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43607">
        <property type="entry name" value="PTHR43607"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00006">
        <property type="entry name" value="ATP-synt_ab"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02874">
        <property type="entry name" value="ATP-synt_ab_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16886">
        <property type="entry name" value="ATP-synt_ab_Xtn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00152">
        <property type="entry name" value="ATPASE_ALPHA_BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0066">ATP synthesis</keyword>
    <keyword evidence="4 7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7" id="KW-0375">Hydrogen ion transport</keyword>
    <keyword evidence="11" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6 7" id="KW-0406">Ion transport</keyword>
    <keyword evidence="3 7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 7" id="KW-1278">Translocase</keyword>
    <keyword evidence="2 7" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ATP-synt_ab_N" evidence="9">
        <location>
            <begin position="55"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="domain" description="ATP-synt_ab_Xtn" evidence="10">
        <location>
            <begin position="104"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="domain" description="ATP-synt_ab" evidence="8">
        <location>
            <begin position="241"/>
            <end position="461"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="260"/>
            <end position="267"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00309"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00006"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF02874"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF16886"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ75987.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="611" mass="67595" checksum="15C75B31C28ADEE7" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AN36</accession>
    <name>A0A0M7AN36_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Flagellar M-ring protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="primary">fliF_1</name>
        <name evidence="14" type="ORF">LAX5112_04090</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">The M ring may be actively involved in energy transduction.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 9">Bacterial flagellum basal body</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 9">Belongs to the FliF family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ75024.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673358.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04090"/>
    <dbReference type="EnsemblBacteria" id="CTQ75024">
        <property type="protein sequence ID" value="CTQ75024"/>
        <property type="gene ID" value="LAX5112_04090"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009431">
        <property type="term" value="C:bacterial-type flagellum basal body, MS ring"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003774">
        <property type="term" value="F:cytoskeletal motor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071973">
        <property type="term" value="P:bacterial-type flagellum-dependent cell motility"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045851">
        <property type="entry name" value="AMP-bd_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013556">
        <property type="entry name" value="Flag_M-ring_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000067">
        <property type="entry name" value="FlgMring_FliF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006182">
        <property type="entry name" value="FliF_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043427">
        <property type="entry name" value="YscJ/FliF"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30046">
        <property type="entry name" value="PTHR30046"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30046:SF0">
        <property type="entry name" value="PTHR30046:SF0"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01514">
        <property type="entry name" value="YscJ_FliF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08345">
        <property type="entry name" value="YscJ_FliF_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004862">
        <property type="entry name" value="FliF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01009">
        <property type="entry name" value="FLGMRINGFLIF"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00206">
        <property type="entry name" value="fliF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 9" id="KW-0975">Bacterial flagellum</keyword>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="14" id="KW-0966">Cell projection</keyword>
    <keyword evidence="14" id="KW-0969">Cilium</keyword>
    <keyword evidence="14" id="KW-0282">Flagellum</keyword>
    <keyword evidence="7 11" id="KW-0472">Membrane</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 11" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 11" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="21"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="domain" description="YscJ_FliF" evidence="12">
        <location>
            <begin position="44"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="domain" description="YscJ_FliF_C" evidence="13">
        <location>
            <begin position="249"/>
            <end position="413"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="293"/>
            <end position="335"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="10">
        <location>
            <begin position="294"/>
            <end position="311"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="10">
        <location>
            <begin position="317"/>
            <end position="335"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007971"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023143"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRNR" id="PIRNR004862"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF01514"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF08345"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="CTQ75024.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="548" mass="59342" checksum="83AA0CCF7F9A8CA3" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AN76</accession>
    <name>A0A0M7AN76_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04395</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75882.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673611.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000023.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75882">
        <property type="protein sequence ID" value="CTQ75882"/>
        <property type="gene ID" value="LAX5112_04395"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75882.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="70" mass="8030" checksum="BDE53904ACC90F41" modified="2015-12-09" version="1">MSLQSNSLDSGRTHSRARRGTKTTLLQRFGVKASGHRTEHLPVFRDFSGRLYHLAIQVREDVKPSHEDRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANR4</accession>
    <name>A0A0M7ANR4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Acetyl-CoA acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_04456</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the thiolase-like superfamily. Thiolase family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ76072.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673661.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000024.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04456"/>
    <dbReference type="EnsemblBacteria" id="CTQ76072">
        <property type="protein sequence ID" value="CTQ76072"/>
        <property type="gene ID" value="LAX5112_04456"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016747">
        <property type="term" value="F:acyltransferase activity, transferring groups other than amino-acyl groups"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.47.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002155">
        <property type="entry name" value="Thiolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016039">
        <property type="entry name" value="Thiolase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020617">
        <property type="entry name" value="Thiolase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020616">
        <property type="entry name" value="Thiolase_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02803">
        <property type="entry name" value="Thiolase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00108">
        <property type="entry name" value="Thiolase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000429">
        <property type="entry name" value="Ac-CoA_Ac_transf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53901">
        <property type="entry name" value="SSF53901"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Thiolase_N" evidence="2">
        <location>
            <begin position="22"/>
            <end position="227"/>
        </location>
    </feature>
    <feature type="domain" description="Thiolase_C" evidence="3">
        <location>
            <begin position="272"/>
            <end position="366"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU003557"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00108"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF02803"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ76072.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="401" mass="42878" checksum="A3EE917753310224" modified="2015-12-09" version="1">MASGIRDKVAILGMGCSQFGERWSDNAEDLMIEAFTEALGDAGIEKNQIDAAWLGTAIEEQHVGKSAVPLSMALRLPNIPVTRVENYCASGSEAFRGAVYAVAAGAADIALALGVEKLKDTGYGGLPQRNRGSVNDLFWANVSAPGSFAQLASAYRAKHGIDAGDLKRAMAHISVKSHDNGARNPKAHLRNRIDEDKVLNAPMIAEPLGLFDCCGVSDGSACAIVTTPEIAKSLGKHDLITVKALQLAASNGLEAQHNSWDGSHFVTTRKCAERAYKEAGITNPREQISLFEVHDCFSITELVTMEDLFISPEGGAVKDIMDGFYDADGKVPCQIDGGLKCFGHPIGASGLRMIYEMYLQLQGRAGERQRKEEPVFGMTHNLGGFPHQNVCSLAIVGKMGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AP26</accession>
    <name>A0A0M7AP26_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04734</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000029">
        <property type="protein sequence ID" value="CTQ76875.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76875">
        <property type="protein sequence ID" value="CTQ76875"/>
        <property type="gene ID" value="LAX5112_04734"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="17"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="42"/>
            <end position="60"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76875.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="69" mass="7649" checksum="4CE4D10EE9FD441F" modified="2015-12-09" version="1">MLERTQKSEHHSEDRHIAILAILFGSAAVLLTLLAVVPEPAAALPFLALILMAQLTRMLGTRLFRDLKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APJ4</accession>
    <name>A0A0M7APJ4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Ribose import ATP-binding protein RbsA</fullName>
            <ecNumber evidence="6">3.6.3.17</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">rbsA_6</name>
        <name evidence="6" type="ORF">LAX5112_04593</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.17" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000026">
        <property type="protein sequence ID" value="CTQ76431.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673785.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000026.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04593"/>
    <dbReference type="EnsemblBacteria" id="CTQ76431">
        <property type="protein sequence ID" value="CTQ76431"/>
        <property type="gene ID" value="LAX5112_04593"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="12"/>
            <end position="247"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="260"/>
            <end position="502"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="44"/>
            <end position="51"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ76431.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="507" mass="55524" checksum="14F733015CEDBE90" modified="2015-12-09" version="1">MQHHSPQLEAVIEAVNISKSFGPVPVLFSVSMDIRAGEVHALIGENGAGKSTLMKILSGFHDPTTGHIKLDGTTTELPPNGAAEKLGIVLIHQELNLAEQMTVEENVFLGRELKSRGFLDRAGMRSLVQKYLDDVGLDISPSDRISDLTIAQKQMVEIVKAVSRNARILIMDEPTAVLTEEETEIFFRQVQKLKQTGVGIVFVSHKLNEVKAIADRVTVLRDGQWIDTRLANELTPDAMAQMMVGRELSDLYPPMHEADVDADLVLEVQNLSTPGAHNVSFNLRKGEILGFSGLIGSGRTAVFEAICGLAPVEGGRIRLFGTEVSALSVAVARDAGLAYLTKDRKEKGLLLDKKMQPNLTLFALPKFIKNFTLDSTAEANALERAIRRFDVRARDHDIVVGKLSGGNQQKLLLAKIMECEPKIVVIDEPTRGIDVGTKQQIYHFIAALAAEGVSVVVISSEMPEIIGICHRVVVMREGQITGVLTGDHINENEIMRYAAGLKREDLH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APP8</accession>
    <name>A0A0M7APP8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">EthD protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04346</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75753.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040453119.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000023.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75753">
        <property type="protein sequence ID" value="CTQ75753"/>
        <property type="gene ID" value="LAX5112_04346"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009799">
        <property type="entry name" value="EthD_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07110">
        <property type="entry name" value="EthD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02118">
        <property type="entry name" value="TIGR02118"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="EthD" evidence="1">
        <location>
            <begin position="19"/>
            <end position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75753.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="102" mass="10886" checksum="AC93034082BE38CE" modified="2015-12-09" version="1">MAFSLQVLYPVRPDTTFDYGYYAEKHMALVAEHMGPHASQVQATKGMAGGPDAPPEFYAVATMVFETKGQLEAALAAAGPVTADIPNYTNTRPQLLIGEVIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQN2</accession>
    <name>A0A0M7AQN2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04757</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000030">
        <property type="protein sequence ID" value="CTQ76957.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673922.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000030.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76957">
        <property type="protein sequence ID" value="CTQ76957"/>
        <property type="gene ID" value="LAX5112_04757"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009560">
        <property type="entry name" value="DUF1176"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06674">
        <property type="entry name" value="DUF1176"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809657" evidence="1">
        <location>
            <begin position="26"/>
            <end position="349"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76957.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="349" mass="38497" checksum="C6037994711582D3" modified="2015-12-09" version="1">MKSQNLLAGLVFSTFACLQPLQAYADEDAYKLSLKLFGKDEVVGGISPCHLSFWQQNRDPETDKYAYLFHANQESDGFTGTGLVEIGDKFYSVNELVYGGEPIEGHGTQYLFASDDRDIKVQIELLEVTFRNDAFYFDRAKVTVIQKGKLPFTANARGVSGCPKTASQPQTASASPHLPAGIPIGYERYMADMSEIPAVLRQQMRDYASDACDIDGQFAWSGARYVINDYFLMWQIPCLQGAYQGSGVFAVTQNPPQDWGELLTLPNPPGLEGNQNYSAMNAKVLGSSGHIETTAFGRGAGDCGVYQVFRLIDGPGEVLELELLEYREKIDCDGNAPEPNTWPLAYRAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQP5</accession>
    <name>A0A0M7AQP5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Adenylate cyclase 1</fullName>
            <ecNumber evidence="2">4.6.1.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">cyaA_18</name>
        <name evidence="2" type="ORF">LAX5112_04844</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="4.6.1.1" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000032">
        <property type="protein sequence ID" value="CTQ77229.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673992.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000032.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04844"/>
    <dbReference type="EnsemblBacteria" id="CTQ77229">
        <property type="protein sequence ID" value="CTQ77229"/>
        <property type="gene ID" value="LAX5112_04844"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004016">
        <property type="term" value="F:adenylate cyclase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009190">
        <property type="term" value="P:cyclic nucleotide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035556">
        <property type="term" value="P:intracellular signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07302">
        <property type="entry name" value="CHD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1230">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001054">
        <property type="entry name" value="A/G_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00211">
        <property type="entry name" value="Guanylate_cyc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00044">
        <property type="entry name" value="CYCc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50125">
        <property type="entry name" value="GUANYLATE_CYCLASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Guanylate cyclase" evidence="1">
        <location>
            <begin position="220"/>
            <end position="351"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77229.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="406" mass="44863" checksum="0B8057ACD164D397" modified="2015-12-09" version="1">MIDMMEIDGIEDWLIGEALGDPDMTNLFAELCERLRQCHVPVDRAILVWSTLHPMIEAEIAFWENGGEVYHEKIEHSEEDTEDWLQSPIRAVLINEEPMLRRRLANANAQTEFPLLKRLASEGYTDYLVIPTHMEIPAIKGEYPNTGIILSWATREEDGFSEDALNAIHYIQKRLALAARAVLQGHITKIIAETYLGSIAGTKVLNGQIRHGDGDTIDAVIYYSDMRNSTAIADALGPEDYLKWLNTYFEATAGAVLQQGGEVLDFIGDAVLGVFPTQKESLSEAVQRAITAADETRRRLHDINKTVSTGHKMNAGIALSTGRVMFGNIGVANRLTFSVIGQTVHAAARIEDLTKRIKSDVLMTGEIAEFAGDRAQNAGAYELDGFTDRQPLFSLEPLPVPGTPNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARB1</accession>
    <name>A0A0M7ARB1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04911</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000034">
        <property type="protein sequence ID" value="CTQ77439.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77439">
        <property type="protein sequence ID" value="CTQ77439"/>
        <property type="gene ID" value="LAX5112_04911"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020269">
        <property type="entry name" value="Phage_Mu_Gp25"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10805">
        <property type="entry name" value="DUF2730"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="29"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77439.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="111" mass="11953" checksum="A472C45CE2E0A631" modified="2015-12-09" version="1">MIDYIKALDGLFGIAGVMVAGAVAVYSFLTRPSKANADKIAELQAVNAELHGRISDLEAVINNLPTREDFHALNLQLTQVSGDISTLSVELTGVRRIATRIDDFLLQQGGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARM5</accession>
    <name>A0A0M7ARM5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04949</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000036">
        <property type="protein sequence ID" value="CTQ77549.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674089.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000036.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77549">
        <property type="protein sequence ID" value="CTQ77549"/>
        <property type="gene ID" value="LAX5112_04949"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021516">
        <property type="entry name" value="DUF3179"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11376">
        <property type="entry name" value="DUF3179"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="52"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="76"/>
            <end position="98"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77549.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="414" mass="45771" checksum="330E74B5BFA9AF44" modified="2015-12-09" version="1">MEVLGILVFYLGLITSLGIGIIYFRDLGDVSQMVLKVKRANMVRFIRNEGRFVAAGLSGAAVMTIAHFALGGGPFWLWLIASVLCAVLYGFPAVWVHVGLRNQKNSAKYYSIADAQEWVSPSSPVVVIENNGVARAHPDAQIMRPHLAGNDEGLAGENVVMTYCAMANLGIGYTPEVEGQPLDLKVLAQHGNNLILRDNTTGEPIQQIYGFRERDVDPSADGPVCPARPGLRMKSWPTFRMTFRGFQKAYPSGTVFINKPPSNPLLALFDMVLEMVFSSEIAKQHRIAKPVMDNMTRHDDRLHNKTYVWGVDINGDAACWTDDFVVENGNLVNATVGRQDLVIAWDPKFESLGVWINGTGSPIDEIDFFGNTAKGQLKRASMLKPGMFWHVWAEYYPHTDINRIGKNETAEAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="31" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARS2</accession>
    <name>A0A0M7ARS2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">S-adenosylmethionine decarboxylase proenzyme</fullName>
            <shortName evidence="9">AdoMetDC</shortName>
            <shortName evidence="9">SAMDC</shortName>
            <ecNumber evidence="9">4.1.1.50</ecNumber>
        </recommendedName>
        <component>
            <recommendedName>
                <fullName evidence="9">S-adenosylmethionine decarboxylase beta chain</fullName>
            </recommendedName>
        </component>
        <component>
            <recommendedName>
                <fullName evidence="9">S-adenosylmethionine decarboxylase alpha chain</fullName>
            </recommendedName>
        </component>
    </protein>
    <gene>
        <name evidence="9 11" type="primary">speH</name>
        <name evidence="11" type="ORF">LAX5112_04972</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>H(+) + S-adenosyl-L-methionine = CO2 + S-adenosyl 3-(methylsulfanyl)propylamine</text>
            <dbReference type="Rhea" id="RHEA:15981"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:57443"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="EC" id="4.1.1.50"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="9">
            <name>pyruvate</name>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
        </cofactor>
        <text evidence="9">Binds 1 pyruvoyl group covalently per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="9">Amine and polyamine biosynthesis; S-adenosylmethioninamine biosynthesis; S-adenosylmethioninamine from S-adenosyl-L-methionine: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="9">Heterotetramer of two alpha and two beta chains arranged as a dimer of alpha/beta heterodimers.</text>
    </comment>
    <comment type="PTM">
        <text evidence="9">Is synthesized initially as an inactive proenzyme. Formation of the active enzyme involves a self-maturation process in which the active site pyruvoyl group is generated from an internal serine residue via an autocatalytic post-translational modification. Two non-identical subunits are generated from the proenzyme in this reaction, and the pyruvate is formed at the N-terminus of the alpha chain, which is derived from the carboxyl end of the proenzyme. The post-translation cleavage follows an unusual pathway, termed non-hydrolytic serinolysis, in which the side chain hydroxyl group of the serine supplies its oxygen atom to form the C-terminus of the beta chain, while the remainder of the serine residue undergoes an oxidative deamination to produce ammonia and the pyruvoyl group blocking the N-terminus of the alpha chain.</text>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily.</text>
    </comment>
    <dbReference type="EC" id="4.1.1.50" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000037">
        <property type="protein sequence ID" value="CTQ77599.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674109.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000037.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04972"/>
    <dbReference type="EnsemblBacteria" id="CTQ77599">
        <property type="protein sequence ID" value="CTQ77599"/>
        <property type="gene ID" value="LAX5112_04972"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00331">
        <property type="reaction ID" value="UER00451"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004014">
        <property type="term" value="F:adenosylmethionine decarboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006557">
        <property type="term" value="P:S-adenosylmethioninamine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008295">
        <property type="term" value="P:spermidine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00464">
        <property type="entry name" value="AdoMetDC_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003826">
        <property type="entry name" value="AdoMetDC_fam_prok"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016067">
        <property type="entry name" value="S-AdoMet_deCO2ase_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017716">
        <property type="entry name" value="S-AdoMet_deCOase_pro-enz"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33866">
        <property type="entry name" value="PTHR33866"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02675">
        <property type="entry name" value="AdoMet_dc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56276">
        <property type="entry name" value="SSF56276"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03330">
        <property type="entry name" value="SAM_DCase_Bsu"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 9" id="KW-0068">Autocatalytic cleavage</keyword>
    <keyword evidence="1 9" id="KW-0210">Decarboxylase</keyword>
    <keyword evidence="6 9 11" id="KW-0456">Lyase</keyword>
    <keyword evidence="4 9" id="KW-0620">Polyamine biosynthesis</keyword>
    <keyword evidence="8 9" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="7 9" id="KW-0704">Schiff base</keyword>
    <keyword evidence="3 9" id="KW-0745">Spermidine biosynthesis</keyword>
    <keyword evidence="5 9" id="KW-0865">Zymogen</keyword>
    <feature type="chain" id="PRO_5023407065" description="S-adenosylmethionine decarboxylase beta chain" evidence="9">
        <location>
            <begin position="1"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5023407066" description="S-adenosylmethionine decarboxylase alpha chain" evidence="9">
        <location>
            <begin position="118"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="20"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="10">
        <location>
            <begin position="25"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="active site" description="Schiff-base intermediate with substrate; via pyruvic acid" evidence="9">
        <location>
            <position position="118"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor; for processing activity" evidence="9">
        <location>
            <position position="123"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor; for catalytic activity" evidence="9">
        <location>
            <position position="138"/>
        </location>
    </feature>
    <feature type="site" description="Cleavage (non-hydrolytic); by autolysis" evidence="9">
        <location>
            <begin position="117"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="modified residue" description="Pyruvic acid (Ser); by autocatalysis" evidence="9">
        <location>
            <position position="118"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022793"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022813"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023066"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023115"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023145"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023270"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023317"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ77599.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="184" mass="20051" checksum="69A2B78126AF607B" modified="2015-12-09" version="1">MKSNALFELGMDLEARVAEDASGVAEPRSTTQKEENVSTAASVYSDDRLDHFIEKEGVHCAGAHLIIDLYDAERIDDLAYMEETMRSCVEEAGATLLHIHLHPFEPTGVSGVAVLAESHISVHTWPEAGYAAFDVFMCGDAQPEKCVEVLRKAFKPGKTAVSELLRGREVANQLSKPHALDAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARX7</accession>
    <name>A0A0M7ARX7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_04775</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000030">
        <property type="protein sequence ID" value="CTQ77010.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673938.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000030.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04775"/>
    <dbReference type="EnsemblBacteria" id="CTQ77010">
        <property type="protein sequence ID" value="CTQ77010"/>
        <property type="gene ID" value="LAX5112_04775"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041657">
        <property type="entry name" value="HTH_17"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024370">
        <property type="entry name" value="PBP_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010093">
        <property type="entry name" value="SinI_DNA-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12728">
        <property type="entry name" value="HTH_17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12727">
        <property type="entry name" value="PBP_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01764">
        <property type="entry name" value="excise"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH_17" evidence="2">
        <location>
            <begin position="15"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="domain" description="PBP_domain" evidence="1">
        <location>
            <begin position="90"/>
            <end position="268"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12727"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF12728"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ77010.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="296" mass="31998" checksum="5916FE6A1B95E696" modified="2015-12-09" version="1">MGIEVPQSAGQQPDYLTTREVADLLRVKERKVYDLAAAEEIPHRRITGKLLFPASEIRAWIEGSGSLVPEDPPAVITGSHDPLLDWAIRDSGCSLATLFNGSREGLACFADHRAALSGLHIPEETGWNVGSASELGVRDAVLIGWAIRKRGLLVSSDAANDIRSVADLKGKRVVRRQPGAGAAALFSRLLEEAGLSEEDLQSSSGFAYTESEAAGAVASGDADAAIGVEAMAKQYKLGFVPLTDEHFDLLINRKSYFTDPVQRLLHFTRTQQFQDKAANMGGYDLSPLGRVRWLSP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AT99</accession>
    <name>A0A0M7AT99_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Methyl-accepting chemotaxis protein 4</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">mcp4_20</name>
        <name evidence="6" type="ORF">LAX5112_04992</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the methyl-accepting chemotaxis (MCP) protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000038">
        <property type="protein sequence ID" value="CTQ77646.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674119.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000038.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77646">
        <property type="protein sequence ID" value="CTQ77646"/>
        <property type="gene ID" value="LAX5112_04992"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004089">
        <property type="entry name" value="MCPsignal_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00015">
        <property type="entry name" value="MCPsignal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00283">
        <property type="entry name" value="MA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50111">
        <property type="entry name" value="CHEMOTAXIS_TRANSDUC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0807">Transducer</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="171"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="5">
        <location>
            <begin position="195"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="domain" description="Methyl-accepting transducer" evidence="4">
        <location>
            <begin position="281"/>
            <end position="510"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00029447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ77646.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="544" mass="58392" checksum="7536047FEB770EDC" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ATV8</accession>
    <name>A0A0M7ATV8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_05016</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000040">
        <property type="protein sequence ID" value="CTQ77690.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77690">
        <property type="protein sequence ID" value="CTQ77690"/>
        <property type="gene ID" value="LAX5112_05016"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ77690.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="378" mass="37542" checksum="94B1BF41026D0817" modified="2015-12-09" version="1">MFCQTICEIDNNPGGGAGVIHPVNACTAINTIGSGAAGKGIVAFTAEKLINTSRATQNIVAVATKNEIVAVAANKNVVAAKTVQHVVTRIPGDRVCKVGPGNVFNAGQNIACSKPALFGQAVGQIDGYTCSRQAVIDRVRARAAIDGVAAGITGKGVIAVLAVELIVTCIAIEGVIADAAIELVVVVATAQGVVAFIAVEFVDTGVAVKCVVVGAALDGVVAVAANNQVIAGVALECIVANAAINLVGAVAAVDVIVALFAEQNVIAVITVEKVPAVATVEIVLVVAAAQDVGTGTAPYFIGAFAALKNVIIRPAVDLVVAIIAADLVITGITDKDVIVTAAVDGIVTVSAGDLIVAVVAIDAVAASVSVKLIVIATT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZLJ5</accession>
    <name>A0A0M6ZLJ5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Glutamine ABC transporter periplasmic protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_00014</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63639.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670295.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00014"/>
    <dbReference type="EnsemblBacteria" id="CTQ63639">
        <property type="protein sequence ID" value="CTQ63639"/>
        <property type="gene ID" value="LAX5112_00014"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00062">
        <property type="entry name" value="PBPb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005808817" evidence="2">
        <location>
            <begin position="24"/>
            <end position="251"/>
        </location>
    </feature>
    <feature type="domain" description="PBPb" evidence="3">
        <location>
            <begin position="25"/>
            <end position="250"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00062"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ63639.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="251" mass="27406" checksum="A8775FEECA9C6621" modified="2015-12-09" version="1">MKRLAHITLIAIGLAFCATAVKAETVRLVTLEYPPYQYVAGSDVDGIVVRILREAFAKMNADISIDVLPWKRSLKMVETGDADAIFTAYKTAERETFLDYSKTVLMPQVVSVWVNKDNNVAFDGSMDSLSDVSIGLVDGLSYGGTVDDAIKSGVLTSLDYAPESSNNVKKLMGGRIDAVIMNKYGVMHHLKNLGGLEKVVELEPELSSVPSYIAFSKANNLAGMRDELDTVLQGMIDSGEYQSIIDTYFAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZM72</accession>
    <name>A0A0M6ZM72_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Cysteine-rich secretory protein family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00094</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63859.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670133.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00094"/>
    <dbReference type="EnsemblBacteria" id="CTQ63859">
        <property type="protein sequence ID" value="CTQ63859"/>
        <property type="gene ID" value="LAX5112_00094"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.33.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014044">
        <property type="entry name" value="CAP_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035940">
        <property type="entry name" value="CAP_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00188">
        <property type="entry name" value="CAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55797">
        <property type="entry name" value="SSF55797"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SCP" evidence="1">
        <location>
            <begin position="57"/>
            <end position="172"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00188"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ63859.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="187" mass="20489" checksum="D35AB4D6E04BE8E3" modified="2015-12-09" version="1">MVFGSQINRAILSLRTLPLILLLAFLAGCGALPGGQGELEDRPVFTDVNVSTSSLMSMVNAYRAQNGLPALRHEPALDGVSQDMARHIAKRDSMDTWQHSAFGLSQRLDKARYPNYAAAENLGAGYADLPAAFRGWQGSEGHNKNLLNPYVTRVGIARTNRSNGKWRNFWVMTLARPQADGRPVPVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZNQ0</accession>
    <name>A0A0M6ZNQ0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00135</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63977.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ63977">
        <property type="protein sequence ID" value="CTQ63977"/>
        <property type="gene ID" value="LAX5112_00135"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010342">
        <property type="entry name" value="DUF938"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20974">
        <property type="entry name" value="PTHR20974"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06080">
        <property type="entry name" value="DUF938"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ63977.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="203" mass="21977" checksum="DF7C02CE0FDE5763" modified="2015-12-09" version="1">MLPFSAAADRNKDVVLETLRPTLANRTKVLEIGSGNGQHAVHVTNALPHITWQCSDLPDNVPGIAERLKQDGNDRTPAPIALDVASPPWPLPAPDGPEAFDAIFTANTLHIMSFEHVEEFFARAGEVLSTQDGALCVYGPLKYGGTFTTESNADFDVQLKSWNPVSGIRDFEDLDALAKAAGLTFTTDHAMPANNQLVVWERG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZP21</accession>
    <name>A0A0M6ZP21_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Triostin synthetase I</fullName>
            <ecNumber evidence="2">6.3.2.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">trsA</name>
        <name evidence="2" type="ORF">LAX5112_00319</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="6.3.2.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64498.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670291.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00319"/>
    <dbReference type="EnsemblBacteria" id="CTQ64498">
        <property type="protein sequence ID" value="CTQ64498"/>
        <property type="gene ID" value="LAX5112_00319"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016874">
        <property type="term" value="F:ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12780">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045851">
        <property type="entry name" value="AMP-bd_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000873">
        <property type="entry name" value="AMP-dep_Synth/Lig"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042099">
        <property type="entry name" value="ANL_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00501">
        <property type="entry name" value="AMP-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0436">Ligase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AMP-binding" evidence="1">
        <location>
            <begin position="27"/>
            <end position="300"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64498.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="544" mass="58713" checksum="C1B19909A4AD81EC" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPP8</accession>
    <name>A0A0M6ZPP8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A</fullName>
            <ecNumber evidence="3">2.8.3.5</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">scoA</name>
        <name evidence="3" type="ORF">LAX5112_00377</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the 3-oxoacid CoA-transferase subunit A family.</text>
    </comment>
    <dbReference type="EC" id="2.8.3.5" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64718.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008190021.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00377"/>
    <dbReference type="EnsemblBacteria" id="CTQ64718">
        <property type="protein sequence ID" value="CTQ64718"/>
        <property type="gene ID" value="LAX5112_00377"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008260">
        <property type="term" value="F:3-oxoacid CoA-transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012792">
        <property type="entry name" value="3-oxoacid_CoA-transf_A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004165">
        <property type="entry name" value="CoA_trans_fam_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004163">
        <property type="entry name" value="CoA_transf_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037171">
        <property type="entry name" value="NagB/RpiA_transferase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13707">
        <property type="entry name" value="PTHR13707"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01144">
        <property type="entry name" value="CoA_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00882">
        <property type="entry name" value="CoA_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100950">
        <property type="entry name" value="SSF100950"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02429">
        <property type="entry name" value="pcaI_scoA_fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01273">
        <property type="entry name" value="COA_TRANSF_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005612"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ64718.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="231" mass="25007" checksum="A17A4423D6C62410" modified="2015-12-09" version="1">MNKVYPDAKAALEGLTFDGMTVMAGGFGLCGIPENLIVALRESGAQNITAISNNAGVDDFGLGLLLQTRQIKKMVSSYVGENATFEKQYLNGELELEFNPQGTLAERIRAGGAGIPGFYTKTGVGTLIADGKEHKDFNGETYIMETGLVSDVSLVKAWKADKEGNLIYRKTARNFNPMMATAGKTTVVEVEELVEVGELDADNIHTAGIFVDRIIVGSHEKRIEKRTTREA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQK7</accession>
    <name>A0A0M6ZQK7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative acetyltransferase YhhY</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00061</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63774.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00061"/>
    <dbReference type="EnsemblBacteria" id="CTQ63774">
        <property type="protein sequence ID" value="CTQ63774"/>
        <property type="gene ID" value="LAX5112_00061"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="4"/>
            <end position="162"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ63774.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="162" mass="17768" checksum="A6DADB54EE6E74CD" modified="2015-12-09" version="1">MTDLIVRSAHAEDGDGIWGMLNPVFAAGETYTVDPDIDRAGALSYWAGGKKVFVVERNGELLGTYYIVCNQKGGGSHVCNCGFVTAAAAQGLGVARLMLEHSLETAMADGFRAMQFNFVVSTNTRAVEIWERYGFEIVGRLPEAFHHPRDGYVDALVMYRKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZR22</accession>
    <name>A0A0M6ZR22_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Cold shock protein CspA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">cspA_2</name>
        <name evidence="4" type="ORF">LAX5112_00403</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64787.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008196034.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ64787">
        <property type="protein sequence ID" value="CTQ64787"/>
        <property type="gene ID" value="LAX5112_00403"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd04458">
        <property type="entry name" value="CSP_CDS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012156">
        <property type="entry name" value="Cold_shock_CspA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011129">
        <property type="entry name" value="CSD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019844">
        <property type="entry name" value="CSD_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002059">
        <property type="entry name" value="CSP_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00313">
        <property type="entry name" value="CSD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002599">
        <property type="entry name" value="Cold_shock_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00050">
        <property type="entry name" value="COLDSHOCK"/>
    </dbReference>
    <dbReference type="SMART" id="SM00357">
        <property type="entry name" value="CSP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00352">
        <property type="entry name" value="CSD_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51857">
        <property type="entry name" value="CSD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CSD" evidence="3">
        <location>
            <begin position="2"/>
            <end position="69"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU000408"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ64787.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="70" mass="7666" checksum="1EC51BE7E0F55D64" modified="2015-12-09" version="1">MRENGTIKFFNHDRGFGFITPENGGKDVFVHVTAFEQAGIGTPVEGAKVSFVAEDDRRGRGKQAAQLELL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZR81</accession>
    <name>A0A0M6ZR81_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Adenine deaminase</fullName>
            <ecNumber evidence="4">3.5.4.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_00558</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family.</text>
    </comment>
    <dbReference type="EC" id="3.5.4.2" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65238.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670494.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00558"/>
    <dbReference type="EnsemblBacteria" id="CTQ65238">
        <property type="protein sequence ID" value="CTQ65238"/>
        <property type="gene ID" value="LAX5112_00558"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000034">
        <property type="term" value="F:adenine deaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd01320">
        <property type="entry name" value="ADA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001365">
        <property type="entry name" value="A_deaminase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006330">
        <property type="entry name" value="Ado/ade_deaminase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032466">
        <property type="entry name" value="Metal_Hydrolase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43114">
        <property type="entry name" value="PTHR43114"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00962">
        <property type="entry name" value="A_deaminase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51556">
        <property type="entry name" value="SSF51556"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01430">
        <property type="entry name" value="aden_deam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="A_deaminase" evidence="3">
        <location>
            <begin position="13"/>
            <end position="332"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ65238.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="340" mass="36819" checksum="F6A8936DFDF5CC38" modified="2015-12-09" version="1">MAPKGKDETLAVPKVELHCHIEGAAPPRLVRQLADQQGVDVSEVIDGKGQYVWCDFTSFLKAYDTASSVFKTPADYALLAETYFRMLAAEGAIYGEIFISPDHAQAAGLSYRSYVEGLAAGIERAKIDTAIDGRMIAIGVRHFGTASVERVVKEVIGNPHPLVTGFGLAGDERSGHPANFAKAFRMAADAGLGTTAHAGEFGGPESITAALEFLRVKRLGHGVRAIEDRDLVKRLADEDIVLEVCPGSNIALGVYSVLRFHPVNMLRKEGVKVTLNSDDPPFFGTTLGKEYASVTETFGWTRDDQMEISRTAIMAAFCDDSTRNRLLTRLDSAKIGSKRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRM7</accession>
    <name>A0A0M6ZRM7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Phosphate-import protein PhnD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">phnD_1</name>
        <name evidence="2" type="ORF">LAX5112_00618</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65429.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670574.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00618"/>
    <dbReference type="EnsemblBacteria" id="CTQ65429">
        <property type="protein sequence ID" value="CTQ65429"/>
        <property type="gene ID" value="LAX5112_00618"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809039" evidence="1">
        <location>
            <begin position="20"/>
            <end position="283"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65429.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="283" mass="30677" checksum="C569F820D9F73E8A" modified="2015-12-09" version="1">MLRSAIAAAAMIFALPVAAEPVRLAVTDIEGLEALQQEFSAFEKALEDTTGLDIELFPVSSRTSAVESMNQNKVDLVLTGPAEYVVMKELTNAEIVVAWQRPNYFAQIVVMAEGEIDGPQDLKGKTVTFGSVGSTSQHLGPAQVLADFGLAYGTDYTAQIISRNVAIEALIRGDVQAVGMNDGHLRRIRDAFPGEAFKVIARGRDLPNDILVARPDMDREALEKIKTAFLENSGTLMAAVLKGEDNQKYGGGFFLTGVNDENYNYVRDMYQTIGVDTSSFVGD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRX9</accession>
    <name>A0A0M6ZRX9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Histidine kinase</fullName>
            <ecNumber evidence="4">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">yycG</name>
        <name evidence="12" type="ORF">LAX5112_00243</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cell membrane</location>
            <topology evidence="3">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64284.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670231.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00243"/>
    <dbReference type="EnsemblBacteria" id="CTQ64284">
        <property type="protein sequence ID" value="CTQ64284"/>
        <property type="gene ID" value="LAX5112_00243"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00130">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017232">
        <property type="entry name" value="NtrY"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045671">
        <property type="entry name" value="NtrY-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000014">
        <property type="entry name" value="PAS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035965">
        <property type="entry name" value="PAS-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013767">
        <property type="entry name" value="PAS_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19312">
        <property type="entry name" value="NtrY_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00989">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF037532">
        <property type="entry name" value="STHK_NtrY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55785">
        <property type="entry name" value="SSF55785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00229">
        <property type="entry name" value="sensory_box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7 12" id="KW-0418">Kinase</keyword>
    <keyword evidence="9" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 12" id="KW-0808">Transferase</keyword>
    <keyword evidence="9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="25"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="54"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="98"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="239"/>
            <end position="260"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="293"/>
            <end position="318"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="11">
        <location>
            <begin position="319"/>
            <end position="372"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="10">
        <location>
            <begin position="510"/>
            <end position="736"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="736"/>
            <end position="755"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="740"/>
            <end position="755"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ64284.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="755" mass="82750" checksum="952AC8F586BCA220" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZS18</accession>
    <name>A0A0M6ZS18_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Diacetyl reductase [(S)-acetoin forming]</fullName>
            <ecNumber evidence="1">1.1.1.304</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">budC_2</name>
        <name evidence="1" type="ORF">LAX5112_00483</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.1.1.304" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65021.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670434.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00483"/>
    <dbReference type="EnsemblBacteria" id="CTQ65021">
        <property type="protein sequence ID" value="CTQ65021"/>
        <property type="gene ID" value="LAX5112_00483"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052588">
        <property type="term" value="F:diacetyl reductase ((S)-acetoin forming) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ65021.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="269" mass="28689" checksum="0307CD613B6E8920" modified="2015-12-09" version="1">MDPNRLKGKNILITGAARGMGEANAKAFAAQGANVCVGDLDGETAGEVANAINAAGIGKAIAVKMDVTKRADNAAAVAATVEAFGTINVGLFNAGLNKPRFFMDIDEDNWDMIMNVNTKAMWLGMQETARQMIAQGPMPDHPYKLINVGSIASRKPLVDVTVYCTSKYGCLALTECGALGLAEHNITVNGYAPGVVVTPLWEQLDKDLVEIGFKEREGQAYEDIVESNLVIKRVSYPDDITGTASFLASDDSDYMTGQMISIDGGWVTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZS88</accession>
    <name>A0A0M6ZS88_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Probable branched-chain-amino-acid aminotransferase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">dat</name>
        <name evidence="3" type="ORF">LAX5112_00246</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Acts on leucine, isoleucine and valine.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64293.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670234.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00246"/>
    <dbReference type="EnsemblBacteria" id="CTQ64293">
        <property type="protein sequence ID" value="CTQ64293"/>
        <property type="gene ID" value="LAX5112_00246"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008483">
        <property type="term" value="F:transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.470.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001544">
        <property type="entry name" value="Aminotrans_IV"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036038">
        <property type="entry name" value="Aminotransferase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043132">
        <property type="entry name" value="BCAT-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043131">
        <property type="entry name" value="BCAT-like_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01063">
        <property type="entry name" value="Aminotran_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56752">
        <property type="entry name" value="SSF56752"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00014472"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ64293.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="287" mass="31825" checksum="A3760023E060807B" modified="2015-12-09" version="1">MSRIAYVNGQYVQHSEAAVHIEDRGYQFADGVYEVCEVWNNQIVDMPRHLDRLGRSLSELSIDWPMSRPAVEFVLRQVVRRNKVRNGLVYIQVTRGVSKRDHFFPPANVAPSIVVTARSSNPAAVNAQAEAGISVFSYPENRWPRVDIKTVALLPNVLAKQSAKERGGKEAWYVDADGNVTEGGSTNAWIVTKDGKLITRPAESGILRGITRTAILDLVEREGLSFEERPFSLEEAYDAKEAFVTAATNIAMPVVRIDDKVIGNGHPGSVATRLRELFHTATDLKVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSI2</accession>
    <name>A0A0M6ZSI2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Phosphatidylinositol mannoside acyltransferase</fullName>
            <ecNumber evidence="6">2.3.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">LAX5112_00314</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.3.1.-" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64484.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670289.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00314"/>
    <dbReference type="EnsemblBacteria" id="CTQ64484">
        <property type="protein sequence ID" value="CTQ64484"/>
        <property type="gene ID" value="LAX5112_00314"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016746">
        <property type="term" value="F:acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009247">
        <property type="term" value="P:glycolipid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="CDD" id="cd07984">
        <property type="entry name" value="LPLAT_LABLAT-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004960">
        <property type="entry name" value="LipA_acyltrans"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30606">
        <property type="entry name" value="PTHR30606"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03279">
        <property type="entry name" value="Lip_A_acyltrans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5 6" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="2" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="1" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022519"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ64484.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="298" mass="33440" checksum="BDA236BB9498CEE6" modified="2015-12-09" version="1">MTFRNHLESLLLSAAIGLFRLFPVDFASWLMGRCWRWIAPMNARHKRALKHLKNAYPDMPLKEREKIVLGMWDNLGRVAAETFHIDRLLHQDHRFEADADEITQAVLRGEQAALFVSFHSGNWEMCVQPAVMGGLEITGVYQALKNPEADKALRSLRKDLYKGGLLSKGHQTARKILSTLKAGGIVAIMGDLRETRGFQVPFFGQMAYANPIPASLARSCGVPIVLGRVIRKNGVNFRIEGRAISVPVTDDRQADIEAATVRIHEIFEEWIGEHPEQWMWIHKKWAAAGSAAPAKDAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSN9</accession>
    <name>A0A0M6ZSN9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Probable GTP-binding protein EngB</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8 10" type="primary">engB</name>
        <name evidence="10" type="ORF">LAX5112_00513</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Necessary for normal cell division and for the maintenance of normal septation.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65110.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670460.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00513"/>
    <dbReference type="EnsemblBacteria" id="CTQ65110">
        <property type="protein sequence ID" value="CTQ65110"/>
        <property type="gene ID" value="LAX5112_00513"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000917">
        <property type="term" value="P:division septum assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01876">
        <property type="entry name" value="YihA_EngB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00321">
        <property type="entry name" value="GTPase_EngB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030393">
        <property type="entry name" value="G_ENGB_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006073">
        <property type="entry name" value="GTP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019987">
        <property type="entry name" value="GTP-bd_ribosome_bio_YsxC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005225">
        <property type="entry name" value="Small_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01926">
        <property type="entry name" value="MMR_HSR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03598">
        <property type="entry name" value="GTPase_YsxC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00231">
        <property type="entry name" value="small_GTP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51706">
        <property type="entry name" value="G_ENGB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="8" id="KW-0132">Cell division</keyword>
    <keyword evidence="6 8" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="5" id="KW-0460">Magnesium</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 8" id="KW-0717">Septation</keyword>
    <feature type="domain" description="EngB-type G" evidence="9">
        <location>
            <begin position="39"/>
            <end position="215"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009638"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023210"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00321"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51706"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ65110.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="215" mass="23679" checksum="5B567ADD0CFEFCAD" modified="2015-12-09" version="1">MSDYETYSEEDLEAGRLMFARQWDFLTSVTDMANLPPAAGTEIAFAGRSNVGKSSLINALTGRKGLARTSSTPGRTQMLNFFVAPETPLTIVDMPGYGYAQAPKELVEAWTNLVFSYLRGRPNLRRVILLIDSRHGIKKNDLEAMELLDKAAVVYQVVLTKADKIKPPALVRLIDETKAALAKRVAAHPEIIATSSEKNRGVDELRAELCNLATQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTD5</accession>
    <name>A0A0M6ZTD5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Potential acrAB operon repressor</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">acrR</name>
        <name evidence="3" type="ORF">LAX5112_00679</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65567.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670624.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ65567">
        <property type="protein sequence ID" value="CTQ65567"/>
        <property type="gene ID" value="LAX5112_00679"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023772">
        <property type="entry name" value="DNA-bd_HTH_TetR-type_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00440">
        <property type="entry name" value="TetR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00455">
        <property type="entry name" value="HTHTETR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01081">
        <property type="entry name" value="HTH_TETR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50977">
        <property type="entry name" value="HTH_TETR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH tetR-type" evidence="2">
        <location>
            <begin position="12"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="1">
        <location>
            <begin position="35"/>
            <end position="54"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ65567.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="199" mass="22096" checksum="8001D1F3811B2048" modified="2015-12-09" version="1">MSEKPTREETTNARRKHIVEVAAACFIAKGFHQTSIRDIARSAGVSLGNIYNHFPGKTEIIAEIASLEAAQIDGFGSMFEKNSKDPHKALDQFLKAYLKTCSAPSHAALTLEILAEAIRQPEITVGFMENREKLLAGLEGLLGRLRNSEMAESYLSDRDAAEFVLDLIEGVGMRVFFEERKPAKRDYQKLHLAISKLCG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZU39</accession>
    <name>A0A0M6ZU39_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_00462</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64963.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670418.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00462"/>
    <dbReference type="EnsemblBacteria" id="CTQ64963">
        <property type="protein sequence ID" value="CTQ64963"/>
        <property type="gene ID" value="LAX5112_00462"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809077" evidence="2">
        <location>
            <begin position="25"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="187"/>
            <end position="206"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ64963.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="213" mass="23102" checksum="F26F225C96297592" modified="2015-12-09" version="1">MKHVPILAFLLLCCGHFATQPAFAHKVIASVFASGSTIQGEIGFSSGDMAIDTLVEVFDGDGNKLGETKTDEAGFFSFSPTQRVVHVFRANLGSGHVTEVRMELDELPDVVDKRQDDDGGTESAPVIEFAASFEEAVPSISSSAVAQLTKAALEENRELVREMIHQEITPLRREIAAYKEKNDLQTILGGIGYIAGLFGLLFYIAARRKLARG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZU65</accession>
    <name>A0A0M6ZU65_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Spermidine/putrescine import ATP-binding protein PotA</fullName>
            <ecNumber evidence="9">7.6.2.11</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">cysA_1</name>
        <name evidence="9" type="synonym">potA</name>
        <name evidence="11" type="ORF">LAX5112_00497</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.</text>
    </comment>
    <comment type="subunit">
        <text evidence="9">The complex is composed of two ATP-binding proteins (PotA), two transmembrane proteins (PotB and PotC) and a solute-binding protein (PotD).</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.</text>
    </comment>
    <dbReference type="EC" id="7.6.2.11" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65064.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670448.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ65064">
        <property type="protein sequence ID" value="CTQ65064"/>
        <property type="gene ID" value="LAX5112_00497"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015417">
        <property type="term" value="F:ABC-type polyamine transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008995">
        <property type="entry name" value="Mo/tungstate-bd_C_term_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005893">
        <property type="entry name" value="Sp_pt_ABC_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013611">
        <property type="entry name" value="Transp-assoc_OB_typ2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08402">
        <property type="entry name" value="TOBE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50331">
        <property type="entry name" value="SSF50331"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01187">
        <property type="entry name" value="potA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 8 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 9" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="11" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="4 8 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 9" id="KW-1278">Translocase</keyword>
    <keyword evidence="2 9" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ABC transporter" evidence="10">
        <location>
            <begin position="4"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="36"/>
            <end position="43"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU364083"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ65064.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="361" mass="39445" checksum="B4E6173C7DD44D91" modified="2015-12-09" version="1">MGAVSLTNIVKRFGAFTAVHRTSMEIPEGSFVTLLGPSGCGKTTTLRMIAGLIDPTEGDITIKGRRINDVPIYKRNLGLVFQNYALFPHKTIAENVAFGLKYRDVSKAEMDKKVRDVLELVQLPHVADRYPKQLSGGQQQRIALARAIVIEPDVLLLDEPLSALDANLREDMRVELKRIQHQIGITTVFVTHDQSEALAMSDQVVVMSNGRVEQVGSPEEVYNTPASEFVSRFLGTSNILDATCKGMSSTDLVLEVPHFGTIAVPKNKAPGVAAEGPSKLVIRAEKLLLMAKDTPVEDRIALDGVVEAVDYQGQAARYFVRVGEQQLQAINMIDEHPFEEGAAVSVRFRARDCAALPGDAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUI9</accession>
    <name>A0A0M6ZUI9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Cell division inhibitor MinD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">minD_1</name>
        <name evidence="3" type="ORF">LAX5112_00539</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65184.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00539"/>
    <dbReference type="EnsemblBacteria" id="CTQ65184">
        <property type="protein sequence ID" value="CTQ65184"/>
        <property type="gene ID" value="LAX5112_00539"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025669">
        <property type="entry name" value="AAA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13614">
        <property type="entry name" value="AAA_31"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="3" id="KW-0132">Cell division</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA_31" evidence="2">
        <location>
            <begin position="171"/>
            <end position="334"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="410"/>
            <end position="435"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ65184.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="435" mass="47334" checksum="31314D0D9C8FED0C" modified="2015-12-09" version="1">MTTGSEATRMSGDAGTYLDHEKQGYAASADATDIAMIPRITIHAFCLEDRTMHVVEAATEDRRMLKAHMKAEMGGIPAAIDMFEKAPTPNLIVVETSGAREDLLQSLDQLAEYCDAGTKVIVIGDVNDVTLYRDLISRGVSEYLITPVSIFQLIGSISNLYNDPEAEPLGRTVAFYGVKGGCGSSTIAHNGAWCLARKFDSEVVIADLDLPFGTAGLDYNQDPLQGVFEAISAPERLDETYLDRILSKCSDHLSLLAAPATLERTYDHSEKTFELLIDTMRLGTPHVVLDVPHAWNSWIRNTLLNADEIVLVAEPDLANLRNAKNTVDLLKQMRPNDKPPHLVMNKVNVPKRPEIKPDEFANALGLSVDAAIPFDPHLFGTSANNGQMIGELDSKHAIAGMFRDLAQTISGKAQPAKTSKSPLGGLISKLKRRAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUQ8</accession>
    <name>A0A0M6ZUQ8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">LAX5112_00847</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66037.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008196430.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00847"/>
    <dbReference type="EnsemblBacteria" id="CTQ66037">
        <property type="protein sequence ID" value="CTQ66037"/>
        <property type="gene ID" value="LAX5112_00847"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007387">
        <property type="entry name" value="TRAP_DctQ"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35011">
        <property type="entry name" value="PTHR35011"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04290">
        <property type="entry name" value="DctQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="21"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="52"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="92"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="134"/>
            <end position="156"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ66037.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="167" mass="18609" checksum="43B68136481281DB" modified="2015-12-09" version="1">MEKFAGVLERLNSFIGNTLCWAALGMLMLQFVIVLLRYVFGYSFIFLDEGVLYFHAAIFMLGAGYTFLVNAHVRVDIFYAKASERTQAWIDIFGHLFLLTPALLILLWFSWPTVRSSWAILEGPISVGGIPASFLLKTLIPAYCILLLVQGAAALIRDISRLKATAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZV16</accession>
    <name>A0A0M6ZV16_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Tripartite tricarboxylate transporter family receptor</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_00859</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UPF0065 (bug) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66071.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040452521.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00859"/>
    <dbReference type="EnsemblBacteria" id="CTQ66071">
        <property type="protein sequence ID" value="CTQ66071"/>
        <property type="gene ID" value="LAX5112_00859"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.190.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005064">
        <property type="entry name" value="BUG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042100">
        <property type="entry name" value="Bug_dom1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42928">
        <property type="entry name" value="PTHR42928"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03401">
        <property type="entry name" value="TctC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF017082">
        <property type="entry name" value="YflP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0675">Receptor</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809098" evidence="2">
        <location>
            <begin position="28"/>
            <end position="327"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006987"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ66071.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="327" mass="34029" checksum="11CBE5710FA40CC6" modified="2015-12-09" version="1">MTLMKMTRRVVLAAAAASMTFATPALSSDQAVESIHFLIPGGAGGGWDGTARGTGEALTKAGLVGTASYENMSGGGGGKAIGYLIENAASNHGTLMVNSTPIVIRSLTGVFPQNFRDLTLVAGTIGDYAALVVGKDSPINSMTDLIAAYKADPSGTAIGGGSVPGGMDHLVAAMAMEAAGEDPTAFKYIPYDAGGKAMAALLSGEIAALSTGFSEAVDLANAGEVKIIGVTSDERVDAYKDAPTMKEQGIDTTFVNWRGFFAAPGLPEEQLAAYQAALTAMYETPEWEEVRARNGWVNIHNNGDDFRSFLENQEQVIGDLMKKLGFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZV17</accession>
    <name>A0A0M6ZV17_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Tripartite tricarboxylate transporter TctA family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00861</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66076.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670760.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00861"/>
    <dbReference type="EnsemblBacteria" id="CTQ66076">
        <property type="protein sequence ID" value="CTQ66076"/>
        <property type="gene ID" value="LAX5112_00861"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002823">
        <property type="entry name" value="DUF112_TM"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01970">
        <property type="entry name" value="TctA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="43"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="79"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="109"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="146"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="169"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="202"/>
            <end position="224"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="263"/>
            <end position="283"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="327"/>
            <end position="346"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="358"/>
            <end position="381"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="393"/>
            <end position="410"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="466"/>
            <end position="486"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66076.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="505" mass="52718" checksum="47A197C6DB8AF88E" modified="2015-12-09" version="1">MLEGILIGLSTAFSVTNLLMVVGGCLIGTFIGMLPGLGPMSIIAIMIPVAISIGDPSAALILLAGVYYGAIFGGSTSSILINAPGVASTVATSFDGYPLARQGKAGKALTVAAISSFAGGSIGAVLLMIFAPALATVALLFHSAEYFALMVVGLSAIAAFAGTGQVIKALLMTILGVIMATVGEGALFNMPRFTMGMMDLQSGFGFITLAMAMFALPEALYLVLDPNRSKTESGSNEIKDLRITKEEAKAIAPVIGRQSIQGFLIGVLPGAGATIASFLGYAVERNIATKEEQEQFGKGSVKGLAAPESANNAACTGSFVPLLTLGIPGSGTTAILLGALIALNVSPGPRLMVDQPEIFWAVIISMYLGNVILLILNLPLIPYIAKILAVPRNFLIPFIMFFTLMGAYIGQNNSTELLILVGFGICATVLRFADYPLAPLLIGFILGRMLEDNFSRSMQLYDGIGFIFARPMTMGLLILAVILVVLPSYRARRARARAEGVADGD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVC2</accession>
    <name>A0A0M6ZVC2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Aspartate/glutamate leucyltransferase</fullName>
            <ecNumber evidence="4">2.3.2.29</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">bpt</name>
        <name evidence="8" type="ORF">LAX5112_01054</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>L-leucyl-tRNA(Leu) + N-terminal L-aspartyl-[protein] = H(+) + N-terminal L-leucyl-L-aspartyl-[protein] + tRNA(Leu)</text>
            <dbReference type="Rhea" id="RHEA:50420"/>
            <dbReference type="Rhea" id="RHEA-COMP:9613"/>
            <dbReference type="Rhea" id="RHEA-COMP:9622"/>
            <dbReference type="Rhea" id="RHEA-COMP:12669"/>
            <dbReference type="Rhea" id="RHEA-COMP:12674"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:64720"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78494"/>
            <dbReference type="ChEBI" id="CHEBI:133042"/>
            <dbReference type="EC" id="2.3.2.29"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>L-leucyl-tRNA(Leu) + N-terminal L-glutamyl-[protein] = H(+) + N-terminal L-leucyl-L-glutamyl-[protein] + tRNA(Leu)</text>
            <dbReference type="Rhea" id="RHEA:50412"/>
            <dbReference type="Rhea" id="RHEA-COMP:9613"/>
            <dbReference type="Rhea" id="RHEA-COMP:9622"/>
            <dbReference type="Rhea" id="RHEA-COMP:12664"/>
            <dbReference type="Rhea" id="RHEA-COMP:12668"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:64721"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78494"/>
            <dbReference type="ChEBI" id="CHEBI:133041"/>
            <dbReference type="EC" id="2.3.2.29"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the R-transferase family. Bpt subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.3.2.29" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66678.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670937.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01054"/>
    <dbReference type="EnsemblBacteria" id="CTQ66678">
        <property type="protein sequence ID" value="CTQ66678"/>
        <property type="gene ID" value="LAX5112_01054"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004057">
        <property type="term" value="F:arginyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008914">
        <property type="term" value="F:leucyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071596">
        <property type="term" value="P:ubiquitin-dependent protein catabolic process via the N-end rule pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00689">
        <property type="entry name" value="Bpt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017138">
        <property type="entry name" value="Asp_Glu_LeuTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030700">
        <property type="entry name" value="N-end_Aminoacyl_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007472">
        <property type="entry name" value="N-end_Aminoacyl_Trfase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007471">
        <property type="entry name" value="N-end_Aminoacyl_Trfase_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21367">
        <property type="entry name" value="PTHR21367"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04377">
        <property type="entry name" value="ATE_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04376">
        <property type="entry name" value="ATE_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF037208">
        <property type="entry name" value="ATE_pro_prd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="1 4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4 8" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="ATE_N" evidence="6">
        <location>
            <begin position="18"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="domain" description="ATE_C" evidence="7">
        <location>
            <begin position="107"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="240"/>
            <end position="259"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00689"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF04376"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF04377"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ66678.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="259" mass="29115" checksum="B877EA08E17DA7FC" modified="2015-12-09" version="1">MTRHPTDHPQFYLTAPAPCPYLEGLQERKVFTHLVGHGAPALNEVLTQGGFRRSQNIAYRPACENCQACVSVRVRVDDFKWTKSLKRVWKSGADVIGARLPPSPSAEQYDLFRDYLQARHEDGGMTEMSILDYAMMVEDTHVETMVIEYRKRGPDTFMTGAGTGPLLGVALSDQLSDGLSMVYSFYDPAFTETALGTYMILDHIERARKLRLPYIYLGYWVDGSVKMAYKARFRPQEHLGPDGWTTVDAPNGPGDPTKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVZ5</accession>
    <name>A0A0M6ZVZ5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Cyclic di-GMP phosphodiesterase Gmr</fullName>
            <ecNumber evidence="4">3.1.4.52</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">gmr_4</name>
        <name evidence="4" type="ORF">LAX5112_00960</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.4.52" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66416.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670879.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00960"/>
    <dbReference type="EnsemblBacteria" id="CTQ66416">
        <property type="protein sequence ID" value="CTQ66416"/>
        <property type="gene ID" value="LAX5112_00960"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071111">
        <property type="term" value="F:cyclic-guanylate-specific phosphodiesterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd01949">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000160">
        <property type="entry name" value="GGDEF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00990">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00267">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00254">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50887">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="28"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="291"/>
            <end position="310"/>
        </location>
    </feature>
    <feature type="domain" description="GGDEF" evidence="3">
        <location>
            <begin position="359"/>
            <end position="493"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="492"/>
            <end position="513"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="495"/>
            <end position="513"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ66416.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="513" mass="56341" checksum="1425135D95662AB6" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZW19</accession>
    <name>A0A0M6ZW19_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">DNA-binding transcriptional repressor RpiR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01155</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66955.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671006.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01155"/>
    <dbReference type="EnsemblBacteria" id="CTQ66955">
        <property type="protein sequence ID" value="CTQ66955"/>
        <property type="gene ID" value="LAX5112_01155"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0097367">
        <property type="term" value="F:carbohydrate derivative binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901135">
        <property type="term" value="P:carbohydrate derivative metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd05013">
        <property type="entry name" value="SIS_RpiR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000281">
        <property type="entry name" value="HTH_RpiR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035472">
        <property type="entry name" value="RpiR-like_SIS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001347">
        <property type="entry name" value="SIS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046348">
        <property type="entry name" value="SIS_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01418">
        <property type="entry name" value="HTH_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01380">
        <property type="entry name" value="SIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53697">
        <property type="entry name" value="SSF53697"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51071">
        <property type="entry name" value="HTH_RPIR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51464">
        <property type="entry name" value="SIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH rpiR-type" evidence="1">
        <location>
            <begin position="6"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="domain" description="SIS" evidence="2">
        <location>
            <begin position="128"/>
            <end position="265"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51071"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ66955.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="287" mass="31245" checksum="5040425D1776EF52" modified="2015-12-09" version="1">MTSARPQIRAAITANYADLSETLRTAADYLADNQLEIATRSLRAIAAASGVSPASYTRLARAIGFSDYEALREQARMELSQRGSSFQDKARQLRNEADQPLLPRQAAACVDNIKALVDDIDPVRLEQVVDCLSKARRTVVVGALASAGFADYFAYLANWFNDSWIVAGRNGASLGGALASLTKDDCIVIVSKHPYAHRSVRAAELAAENGAKVIVLTDSHAFPGLQFADHHFIQRTESPHFFSSYAATLVLIETITGMLVARAGSEAEARIQNVDRHNRLLDELENV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWV9</accession>
    <name>A0A0M6ZWV9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00998</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66520.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008193158.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ66520">
        <property type="protein sequence ID" value="CTQ66520"/>
        <property type="gene ID" value="LAX5112_00998"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="46"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="76"/>
            <end position="97"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66520.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="113" mass="12370" checksum="62079E54B2B67A67" modified="2015-12-09" version="1">MEILQPAAVMALSAAVFGFIIWAYFRVSKHFQSETRDQNGWGSDRISILLAIGLVIGFTVSYIEIFIYAFRLPFSGAVDVTIGLAAAMIAMTAAYTVQAYSEKRAIGASRPRN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWX2</accession>
    <name>A0A0M6ZWX2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B</fullName>
            <shortName evidence="10">Asp/Glu-ADT subunit B</shortName>
            <ecNumber evidence="10">6.3.5.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10 12" type="primary">gatB</name>
        <name evidence="12" type="ORF">LAX5112_01293</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9 10">Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 10">
            <text>ATP + H2O + L-aspartyl-tRNA(Asn) + L-glutamine = ADP + 2 H(+) + L-asparaginyl-tRNA(Asn) + L-glutamate + phosphate</text>
            <dbReference type="Rhea" id="RHEA:14513"/>
            <dbReference type="Rhea" id="RHEA-COMP:9674"/>
            <dbReference type="Rhea" id="RHEA-COMP:9677"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="ChEBI" id="CHEBI:78515"/>
            <dbReference type="ChEBI" id="CHEBI:78516"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2 10">
            <text>ATP + H2O + L-glutamine + L-glutamyl-tRNA(Gln) = ADP + H(+) + L-glutamate + L-glutaminyl-tRNA(Gln) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:17521"/>
            <dbReference type="Rhea" id="RHEA-COMP:9681"/>
            <dbReference type="Rhea" id="RHEA-COMP:9684"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="ChEBI" id="CHEBI:78520"/>
            <dbReference type="ChEBI" id="CHEBI:78521"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="4 10">Heterotrimer of A, B and C subunits.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 10">Belongs to the GatB/GatE family. GatB subfamily.</text>
    </comment>
    <dbReference type="EC" id="6.3.5.-" evidence="10"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67255.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671122.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01293"/>
    <dbReference type="EnsemblBacteria" id="CTQ67255">
        <property type="protein sequence ID" value="CTQ67255"/>
        <property type="gene ID" value="LAX5112_01293"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050566">
        <property type="term" value="F:asparaginyl-tRNA synthase (glutamine-hydrolyzing) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050567">
        <property type="term" value="F:glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.410">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.380">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00121">
        <property type="entry name" value="GatB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004413">
        <property type="entry name" value="Apn/Gln-ADT_bsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017959">
        <property type="entry name" value="Asn/Gln-tRNA_amidoTrfase_suB/E"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006075">
        <property type="entry name" value="Asn/Gln-tRNA_Trfase_suB/E_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018027">
        <property type="entry name" value="Asn/Gln_amidotransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003789">
        <property type="entry name" value="Asn/Gln_tRNA_amidoTrase-B-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042114">
        <property type="entry name" value="GatB_C_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023168">
        <property type="entry name" value="GatB_Yqey_C_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017958">
        <property type="entry name" value="Gln-tRNA_amidoTrfase_suB_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014746">
        <property type="entry name" value="Gln_synth/guanido_kin_cat_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11659">
        <property type="entry name" value="PTHR11659"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02934">
        <property type="entry name" value="GatB_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02637">
        <property type="entry name" value="GatB_Yqey"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00845">
        <property type="entry name" value="GatB_Yqey"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55931">
        <property type="entry name" value="SSF55931"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89095">
        <property type="entry name" value="SSF89095"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00133">
        <property type="entry name" value="gatB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01234">
        <property type="entry name" value="GATB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 10 12" id="KW-0436">Ligase</keyword>
    <keyword evidence="6 10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8 10" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="12" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="GatB_Yqey" evidence="11">
        <location>
            <begin position="345"/>
            <end position="490"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00000924"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00024799"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00121"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="SMART" id="SM00845"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ67255.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="493" mass="54354" checksum="9341AB539E6E7DA4" modified="2015-12-09" version="1">MTIVDARTPDPKKFIKGATGDWEIVIGMEVHAQVTSDAKLFSGASTEFGQDPNNNVSLVDAAMPGMLPVINEECVRQAIRTGLGLKAEINLKSVFDRKNYFYPDLPQGYQISQFKQPIVGEGEILLDMPDEQVEIGVERLHLEQDAGKSLHDQHPSMSFVDLNRSGVALMEIVSKPDLRSADEAKAYLTKLRTILRYLGTCDGNMDQGSMRADVNVSVRRPGGEFGTRCEIKNVNSIRFVGQAIEYEARRQMAILEDGGSIDQETRLFDSVKGETRSMRSKEEAHDYRYFPDPDLLPLEFTQSFVDELAADLPELPDDKKARFVRDFGLTAYDADVLVAEKASADFFEEVAKGRDAKLAANWLINELFGRLNKEGKDLETSPVSAAQLGGIIDLIKAGTISGKIAKDVFEIVWTEGGDPAQIVEDRGMKQVTDLGAIEAIVDEIIAANPDKVEQAKDKPNLVGWFVGQVMKASKGKANPQAVNDLLKQKIGLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZX17</accession>
    <name>A0A0M6ZX17_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Sel1 repeat</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01108</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66827.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451787.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ66827">
        <property type="protein sequence ID" value="CTQ66827"/>
        <property type="gene ID" value="LAX5112_01108"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006597">
        <property type="entry name" value="Sel1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08238">
        <property type="entry name" value="Sel1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00671">
        <property type="entry name" value="SEL1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809170" evidence="1">
        <location>
            <begin position="26"/>
            <end position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66827.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="164" mass="18126" checksum="67598F6ADFBE3F68" modified="2015-12-09" version="1">MTPLRSAVAALCILVSAAMTSPARAEIEEARDLMESGKFEEAKDALWPAARSGNADAEELIGVMYAMGLGVERDDQRAFEWYLRSAMKGHPGAQSGVGWYYEIGRGMPAPDLVRAYMWYTLSAIGGDPDAAISLEEVVKKMTAEEIEKAHILVADYKVWMYPFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZX25</accession>
    <name>A0A0M6ZX25_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Bacterial extracellular solute-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00856</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66063.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00856"/>
    <dbReference type="EnsemblBacteria" id="CTQ66063">
        <property type="protein sequence ID" value="CTQ66063"/>
        <property type="gene ID" value="LAX5112_00856"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809023" evidence="1">
        <location>
            <begin position="26"/>
            <end position="358"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66063.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="358" mass="39355" checksum="0C40E1765435E23B" modified="2015-12-09" version="1">MKDTQCKSIAFGLWMLAAFNVPVTAAEPELVEQYGAAAAEQILIVRSTADISVFAPVVEAFLKTRFDLSLIYEQWGSNDLYTQSRAECREGAPVADVVISSGVHQMVKLVNEACAQSHVSRETEQLPAALRWRDELWGISREPAVVIYNQDLVPPAEVPKSRFDLLDLLRPANTPYAGRVATYDIERSGLGYLFAFVDAQEASTFGALQEAFVRTQAVRSCCSSDIIRSVADGRYLIAYNVLGSYAQGYQQQDDRIGIVLPTDYTLVLSRALMIPKGANNGAAAADFLDFLLSPDGRRVLRQALLISPLLETEEGAEGETLSSTALRPIGLSPALMVARDQLTRETFLKRWRVTFPGP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXC6</accession>
    <name>A0A0M6ZXC6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Anti-sigma factor antagonist</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">btrV</name>
        <name evidence="4" type="ORF">LAX5112_01146</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the anti-sigma-factor antagonist family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66931.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01146"/>
    <dbReference type="EnsemblBacteria" id="CTQ66931">
        <property type="protein sequence ID" value="CTQ66931"/>
        <property type="gene ID" value="LAX5112_01146"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043856">
        <property type="term" value="F:anti-sigma factor antagonist activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.750.24">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003658">
        <property type="entry name" value="Anti-sigma_ant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002645">
        <property type="entry name" value="STAS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036513">
        <property type="entry name" value="STAS_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01740">
        <property type="entry name" value="STAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52091">
        <property type="entry name" value="SSF52091"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00377">
        <property type="entry name" value="ant_ant_sig"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50801">
        <property type="entry name" value="STAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="STAS" evidence="3">
        <location>
            <begin position="7"/>
            <end position="116"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009013"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU003749"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ66931.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="118" mass="12677" checksum="0A9A2DE0E0834743" modified="2015-12-09" version="1">MADAAHLTIDDETVDGIRIICPKGKLETLSAKDFEAHLKSAAQESDSSLLIDMSGVDYVTSFGLRSLLIITKQIAPAGRKLILFGVNPSVHEVLKISGFLKILSVVEGRDDALAEIRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZY98</accession>
    <name>A0A0M6ZY98_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01230</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67142.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671220.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01230"/>
    <dbReference type="EnsemblBacteria" id="CTQ67142">
        <property type="protein sequence ID" value="CTQ67142"/>
        <property type="gene ID" value="LAX5112_01230"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016913">
        <property type="entry name" value="UCP029215"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09979">
        <property type="entry name" value="DUF2213"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF029215">
        <property type="entry name" value="UCP029215"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="219"/>
            <end position="264"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67142.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="374" mass="39719" checksum="ECB540899C61FC95" modified="2015-12-09" version="1">MQFIDAAAVAGTRMTADGYLVADVRTARTGIQVYTGAEAGRPELATVRVYRPDEQVFDKASLASYAHRPVTNDHPAEPVTADNWKNHSVGSIGDEVARDGDFVRVPLIVMDGAAIKAVQDGKRELSAGYHCDLAFEPGTTPDGQQYDAIQKNIRINHVAIVNRGRAGSKARIGDGAEWGASPLTTQTADERNGSMADNLQKVLVDGLLVETTDAGATAIDRLKNDKASLATQLADAETAHKAALDAKDAELAKKDAEIDDLKSKVIDGAALDAKVAARADLIATAKTIAKDLKTDGLSDAEIRKAAVVAKLGDAAIAGKPEAYVDVRFDILAEDAKKADPFADAMKGRDTTPNINDNGQADYEKRLADAWKQEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYD8</accession>
    <name>A0A0M6ZYD8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01531</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67818.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67818">
        <property type="protein sequence ID" value="CTQ67818"/>
        <property type="gene ID" value="LAX5112_01531"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67818.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="354" mass="39889" checksum="7AAB74B7744A4319" modified="2015-12-09" version="1">MTYQPTHPLPFSINTAPVMPIDLYVPAGPPGDQYRTTNTAPFMTDLDEFGWTVPDALDVSTSTVEIDGLPFLNLDPYNLDGKDNLPTGDLAEGPQGGLSSQVDVQAGSGEQQVNFSLEMENYTYTTEYGQINILTLAEERTTEIKTINFNGQEVAVEYQAGIAHEFEGSFYDNAFRELYVEMAFETGMEIQAEAFDANGNPIMTAFGYEQALEVYGEAFDYGIEEFEMNFELGIELELNDFGMYEMTLSVMFEGEIVYMNGAERFYEFEDELFFMFSDQEQIDFNQIPDGLYNEIQKFAAGMGDAWGGMETLNAQLEAIFLQLQEDGHYQAWDDVDQGLDNPFDFNVPPSDWLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYG6</accession>
    <name>A0A0M6ZYG6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01200</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67070.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671039.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67070">
        <property type="protein sequence ID" value="CTQ67070"/>
        <property type="gene ID" value="LAX5112_01200"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67070.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="237" mass="26976" checksum="769BDD06A9F91596" modified="2015-12-09" version="1">MIFSPEQHQTLMRAFAKVEREIAEAGFNCRVETDFDRLKEDITKTGKPLSPWFWADKYDFNGHNAFCMVLEKDGQGLVYICNQRMDLGARTLEQAYIQRLKALYSHDPTAKLDETWTCEPLQEVTGVVAYSGDAVTHPDLRSCGFSLKSLGLVSRLSLFYTLTYWDDVDWIVGTIPDKNIKRGLGWAYGGNRCYAMAEEWEVMPEDGRGKLNAAIVLSSRRDVLWTAKTVTATHRSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYQ0</accession>
    <name>A0A0M6ZYQ0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">dTDP-glucose 4,6-dehydratase</fullName>
            <ecNumber evidence="3">4.2.1.46</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">rfbB</name>
        <name evidence="3" type="ORF">LAX5112_01578</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the NAD(P)-dependent epimerase/dehydratase family.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.46" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67938.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671364.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01578"/>
    <dbReference type="EnsemblBacteria" id="CTQ67938">
        <property type="protein sequence ID" value="CTQ67938"/>
        <property type="gene ID" value="LAX5112_01578"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008460">
        <property type="term" value="F:dTDP-glucose 4,6-dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001509">
        <property type="entry name" value="Epimerase_deHydtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01370">
        <property type="entry name" value="Epimerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0456">Lyase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Epimerase" evidence="2">
        <location>
            <begin position="5"/>
            <end position="222"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007637"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ67938.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="294" mass="32569" checksum="D20762447269E6B9" modified="2015-12-09" version="1">MRVFFTGGSGKAGKWAIQHLQMQGHHVVNVDQRPSGLDCPELLVDLCDAGQVIGAMSQFAESAELDAGTGVPTYDAVVHFAAVPRVMIGADGECFRQNTLTTYNVIEAAVKLGVRKVIFASSETTYAICFADGELKPNFVPIDETHPTVPHDSYAMSKVCNEVTARSFQARTGADIYGLRINNVIEPHEYAEMFPAFMENPALRRRNIFAYIDARDLGHMVDCCLKTDGLGYQVFNVSNDDMSVGITSDQVIEQFYHGVEVRSDMDANETFFSNKKAKRIVGFEPKHSWRDVLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYV4</accession>
    <name>A0A0M6ZYV4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Bacteriophytochrome cph2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">cph2_4</name>
        <name evidence="4" type="ORF">LAX5112_01066</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66713.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01066"/>
    <dbReference type="EnsemblBacteria" id="CTQ66713">
        <property type="protein sequence ID" value="CTQ66713"/>
        <property type="gene ID" value="LAX5112_01066"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01948">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01949">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.450">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001633">
        <property type="entry name" value="EAL_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035919">
        <property type="entry name" value="EAL_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000160">
        <property type="entry name" value="GGDEF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00563">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00990">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00052">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00267">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141868">
        <property type="entry name" value="SSF141868"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00254">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50883">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50887">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="40"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="62"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="108"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="158"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="183"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="domain" description="GGDEF" evidence="3">
        <location>
            <begin position="271"/>
            <end position="402"/>
        </location>
    </feature>
    <feature type="domain" description="EAL" evidence="2">
        <location>
            <begin position="407"/>
            <end position="661"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ66713.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="676" mass="75492" checksum="62AD021ACBFAFA05" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZF0</accession>
    <name>A0A0M6ZZF0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">VWA domain containing CoxE-like protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01489</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67707.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671300.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01489"/>
    <dbReference type="EnsemblBacteria" id="CTQ67707">
        <property type="protein sequence ID" value="CTQ67707"/>
        <property type="gene ID" value="LAX5112_01489"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.410">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011195">
        <property type="entry name" value="UCP010256"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008912">
        <property type="entry name" value="Uncharacterised_CoxE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036465">
        <property type="entry name" value="vWFA_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05762">
        <property type="entry name" value="VWA_CoxE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF010256">
        <property type="entry name" value="CoxE_vWa"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53300">
        <property type="entry name" value="SSF53300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="384"/>
            <end position="403"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67707.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="403" mass="45417" checksum="8D6FA6F753B7BEB1" modified="2015-12-09" version="1">MTAVRSRITDNIVYFARTLRKAGVPVGPASVVDAVQAVEVSGISNRDDLYWTLHAVFVRKREHRILFDEAFRVYWQSRGLIEKMLAILSPVAPPRGAPEKPKAGQTRVAQAFQANKERVAEETRPEIEVDAKFTVSGKELLQSKDFAQMTAEEINDAKKALASMALTMDKIRLRRLVPAHSGKVDPRRTLRASMRAGGDIIDLKFRQPAEKRPPLVALCDISGSMSQYSRLLLHFLHAVTAERRDVHTFLFGTRLSNVTRQLRMKDPDEALEACSEGVQDWSGGTRIASALHDFNRHWSRRVLSGKPTVLLITDGLERDSDEDLAREMDRLHRSCRRLIWLNPLLRFEGFEAKAKGIRAMLPHVDEFRAVHSLEAVADLVSALTGKQSDSKSANPKSWLKRQN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZN6</accession>
    <name>A0A0M6ZZN6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Acyl-CoA dehydrogenase, short-chain specific</fullName>
            <ecNumber evidence="9">1.3.8.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">LAX5112_01175</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 5">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the acyl-CoA dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.3.8.1" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67004.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671020.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01175"/>
    <dbReference type="EnsemblBacteria" id="CTQ67004">
        <property type="protein sequence ID" value="CTQ67004"/>
        <property type="gene ID" value="LAX5112_01175"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004085">
        <property type="term" value="F:butyryl-CoA dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.540.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006091">
        <property type="entry name" value="Acyl-CoA_Oxase/DH_mid-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046373">
        <property type="entry name" value="Acyl-CoA_Oxase/DH_mid-dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036250">
        <property type="entry name" value="AcylCo_DH-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009075">
        <property type="entry name" value="AcylCo_DH/oxidase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013786">
        <property type="entry name" value="AcylCoA_DH/ox_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037069">
        <property type="entry name" value="AcylCoA_DH/ox_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009100">
        <property type="entry name" value="AcylCoA_DH/oxidase_NM_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00441">
        <property type="entry name" value="Acyl-CoA_dh_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02770">
        <property type="entry name" value="Acyl-CoA_dh_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02771">
        <property type="entry name" value="Acyl-CoA_dh_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47203">
        <property type="entry name" value="SSF47203"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56645">
        <property type="entry name" value="SSF56645"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0274">FAD</keyword>
    <keyword evidence="3 5" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="5 9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Acyl-CoA_dh_N" evidence="8">
        <location>
            <begin position="6"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="domain" description="Acyl-CoA_dh_M" evidence="7">
        <location>
            <begin position="121"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="domain" description="Acyl-CoA_dh_1" evidence="6">
        <location>
            <begin position="234"/>
            <end position="357"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009347"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU362125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00441"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF02770"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF02771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ67004.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="377" mass="39748" checksum="04580BEB9EC41D02" modified="2015-12-09" version="1">MDFNLTEERGLLRDMLQKFLGEKYGHEERRKLIASGKAYDAGIYAEMAELGVFGAMFSEDDGGFGGAGFDIAVVFEELGRAGVIEPILGNAVLAGSLIAELGTDSQKELIGSVIAGETLLALAHAEPASRYDLSHVTASAKTDGGQITLNGTKAHVLNGAQAGMLVVSVREAGADFDETGISLFLVPADSKGVTIVDHPNVDGTSAATIRLENVLVDEGAQLGASGEAFAAIEAAVASATLAVSAEALGAMEAAKALTIDYLKERKQFGIAIGKFQALQHRMADVLIEVEQARSAVINLAGHLDAPRALRERHVSATKNLIGRASALVGEEAVQMHGGIGMTDEYALSHFVRRMVMIDHLFGDVDHHLERFISLNAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZN9</accession>
    <name>A0A0M6ZZN9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">LIV-I protein H</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">livH_7</name>
        <name evidence="7" type="ORF">LAX5112_01182</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67023.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671025.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01182"/>
    <dbReference type="EnsemblBacteria" id="CTQ67023">
        <property type="protein sequence ID" value="CTQ67023"/>
        <property type="gene ID" value="LAX5112_01182"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001851">
        <property type="entry name" value="ABC_transp_permease"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02653">
        <property type="entry name" value="BPD_transp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="12"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="47"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="85"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="139"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="188"/>
            <end position="210"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="216"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="241"/>
            <end position="267"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="279"/>
            <end position="299"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ67023.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="310" mass="33313" checksum="355AF7EC722AFB48" modified="2015-12-09" version="1">METFFFSLLNGVIYGLLLFMLSSGLTLIFSMMGVLNFAHASFYMLGAYFAYTIGSVTGFWIALFLAPILVGLAGAGIERWGLRKVHANGHLAELLFTFGLAYLIDELVKIIWGKIPVPYEIPAALDFPLFTLFGAQYPAYRIFMLGVSIAMLAGLWFLLKRTRAGLIIQAALTHPHMVGHLGHNVPRVFMMVFGLGCALAGLAGVIGGNYLVTEPAMALSIGPIVFVVVVVGGMGSLEGAFIASLLIGLLQTFAISIDTTFAEIFAFTGLSPLSDLGGISIASLAPMLPFLLLVLVLMIRPRGLMGEREI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0S6</accession>
    <name>A0A0M7A0S6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Pseudouridine synthase</fullName>
            <ecNumber evidence="3">5.4.99.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">rluC</name>
        <name evidence="5" type="ORF">LAX5112_01758</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Responsible for synthesis of pseudouridine from uracil.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>a uridine in RNA = a pseudouridine in RNA</text>
            <dbReference type="Rhea" id="RHEA:48348"/>
            <dbReference type="Rhea" id="RHEA-COMP:12068"/>
            <dbReference type="Rhea" id="RHEA-COMP:12069"/>
            <dbReference type="ChEBI" id="CHEBI:65314"/>
            <dbReference type="ChEBI" id="CHEBI:65315"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the pseudouridine synthase RluA family.</text>
    </comment>
    <dbReference type="EC" id="5.4.99.-" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68489.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671488.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01758"/>
    <dbReference type="EnsemblBacteria" id="CTQ68489">
        <property type="protein sequence ID" value="CTQ68489"/>
        <property type="gene ID" value="LAX5112_01758"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0120159">
        <property type="term" value="F:rRNA pseudouridine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000455">
        <property type="term" value="P:enzyme-directed rRNA pseudouridine synthesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="CDD" id="cd02869">
        <property type="entry name" value="PseudoU_synth_RluA_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00165">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.290.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020103">
        <property type="entry name" value="PsdUridine_synth_cat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006225">
        <property type="entry name" value="PsdUridine_synth_RluC/D"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006224">
        <property type="entry name" value="PsdUridine_synth_RluC/D_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006145">
        <property type="entry name" value="PsdUridine_synth_RsuA/RluA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002942">
        <property type="entry name" value="S4_RNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036986">
        <property type="entry name" value="S4_RNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00849">
        <property type="entry name" value="PseudoU_synth_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55120">
        <property type="entry name" value="SSF55120"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00005">
        <property type="entry name" value="rluA_subfam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01129">
        <property type="entry name" value="PSI_RLU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0413">Isomerase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PseudoU_synth_2" evidence="4">
        <location>
            <begin position="105"/>
            <end position="257"/>
        </location>
    </feature>
    <feature type="active site" evidence="2">
        <location>
            <position position="148"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010876"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR606225-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU362028"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ68489.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="340" mass="38250" checksum="F09B3BDB000B8069" modified="2015-12-09" version="1">MSAIEQKKVTADEAGMRLDRWFKAHYPGLGFGRLQKLLRTGQVRVDGKRAESNTRIAKGQIIRIPPLGVELPADDKKNARPKSTKLIADDKKAIEDMLLYEDNQVMVLNKPAGLAVQGGSGLKRHLDGMLDAFTDQKGNKPRLVHRLDRETSGIILVARTRQAAQELTKAFRHRNTRKVYWTILAGVPKPHQGRISTFLARDEEEERMQVVRQGGANDAQHAVSLYSVFEKSGQKLSWVTMKPVTGRTHQLRAHAAHIGHPIIGDDKYFNIENWELPGGIQNRLHLLARRIVIPHPSGHGKIDVSAPLPPHMQQTWNLLGFDATDYDPETDDPDENIIKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0Z0</accession>
    <name>A0A0M7A0Z0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Short chain dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01827</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the NAD(P)-dependent epimerase/dehydratase family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68655.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671543.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ68655">
        <property type="protein sequence ID" value="CTQ68655"/>
        <property type="gene ID" value="LAX5112_01827"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001509">
        <property type="entry name" value="Epimerase_deHydtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01370">
        <property type="entry name" value="Epimerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Epimerase" evidence="2">
        <location>
            <begin position="3"/>
            <end position="208"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007637"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ68655.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="294" mass="31761" checksum="D627B7BCC7D9016B" modified="2015-12-09" version="1">MDVFVTGGTGGIGSAVVKQLVQDGCQVIGLSRSDQSAEKLRRLGASAYPGDLRDPATWVERATACDAVVHLGATFLSDMGKVDRIAMLEMKKAARHRKQPLKVVYTGGIWLYPPCKAGDVLNEKTPFSPLPAFRFMTETIKTLSTGTDLALCVVHPVLVCGPDFGPVADMTAALKQSGRFETRASEHTFWPLVEVSDLARLYALVLRQTRFRMSVIGSGISGVSVDHLASHISARHGKPLEIVTQPAPEGIDRDQDWAAGYALSQSADNTHAKRLLSWSPEHAAVEDLVISLSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="31" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1M9</accession>
    <name>A0A0M7A1M9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 10">Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase</fullName>
            <shortName evidence="10">NN:DBI PRT</shortName>
            <ecNumber evidence="4 10">2.4.2.21</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9 10">N(1)-alpha-phosphoribosyltransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="primary">cobU</name>
        <name evidence="10" type="synonym">cobT</name>
        <name evidence="11" type="ORF">LAX5112_01926</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 10">
            <text>5,6-dimethylbenzimidazole + nicotinate beta-D-ribonucleotide = alpha-ribazole 5'-phosphate + H(+) + nicotinate</text>
            <dbReference type="Rhea" id="RHEA:11196"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15890"/>
            <dbReference type="ChEBI" id="CHEBI:32544"/>
            <dbReference type="ChEBI" id="CHEBI:57502"/>
            <dbReference type="ChEBI" id="CHEBI:57918"/>
            <dbReference type="EC" id="2.4.2.21"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 10">Nucleoside biosynthesis; alpha-ribazole biosynthesis; alpha-ribazole from 5,6-dimethylbenzimidazole: step 1/2.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 10">Belongs to the CobT family.</text>
    </comment>
    <dbReference type="EC" id="2.4.2.21" evidence="4 10"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68895.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671617.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01926"/>
    <dbReference type="EnsemblBacteria" id="CTQ68895">
        <property type="protein sequence ID" value="CTQ68895"/>
        <property type="gene ID" value="LAX5112_01926"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00061">
        <property type="reaction ID" value="UER00516"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008939">
        <property type="term" value="F:nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009236">
        <property type="term" value="P:cobalamin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd02439">
        <property type="entry name" value="DMB-PRT_CobT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1610.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10210">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00230">
        <property type="entry name" value="CobT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003200">
        <property type="entry name" value="Nict_dMeBzImd_PRibTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017846">
        <property type="entry name" value="Nict_dMeBzImd_PRibTrfase_bact"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023195">
        <property type="entry name" value="Nict_dMeBzImd_PRibTrfase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036087">
        <property type="entry name" value="Nict_dMeBzImd_PRibTrfase_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02277">
        <property type="entry name" value="DBI_PRT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52733">
        <property type="entry name" value="SSF52733"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03160">
        <property type="entry name" value="cobT_DBIPRT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 10" id="KW-0169">Cobalamin biosynthesis</keyword>
    <keyword evidence="7 10 11" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 10 11" id="KW-0808">Transferase</keyword>
    <feature type="active site" description="Proton acceptor" evidence="10">
        <location>
            <position position="307"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001058"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011991"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00015486"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022573"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00030686"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00230"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ68895.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="341" mass="35311" checksum="A566DEAAE6D258E3" modified="2015-12-09" version="1">MSLSETALPFDDIRNLVKSMPGPDEEALQKVKARDAQLTKPAGSLGRLEEIAEWLAAWSGKAPPKITRPMVGIFATAHGVADEGVSAFPSAVNRQMVENFAAGGAAINQICRVNDIGLKVFDLAVDMPTPSITQEDALDEANCAATMAYGMEALAGGIDLICLGEMGIGNTTVSAAVLNGLFGGSAADWIGRGTGVDDEGLARKRDAVEKAVNRLNGEKDPLEVLRKVGGREIAAMAGLIIAARLQRVPVVVDGFVATAAAAVVYAMDPEGLDHCLFAHVSAEQAHAKALSHMGKDALFDFGMRLGEGSGAALAAGIIKTAAEVHSGMATFADAGVSEKSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1V1</accession>
    <name>A0A0M7A1V1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">30S ribosomal protein S17</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3 4" type="primary">rpsQ</name>
        <name evidence="4" type="ORF">LAX5112_01735</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">Part of the 30S ribosomal subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the universal ribosomal protein uS17 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68426.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008195414.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01735"/>
    <dbReference type="EnsemblBacteria" id="CTQ68426">
        <property type="protein sequence ID" value="CTQ68426"/>
        <property type="gene ID" value="LAX5112_01735"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01345_B">
        <property type="entry name" value="Ribosomal_S17_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019984">
        <property type="entry name" value="Ribosomal_S17"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000266">
        <property type="entry name" value="Ribosomal_S17/S11"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10744">
        <property type="entry name" value="PTHR10744"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00366">
        <property type="entry name" value="Ribosomal_S17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00973">
        <property type="entry name" value="RIBOSOMALS17"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03635">
        <property type="entry name" value="uS17_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3 4" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="3" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="2 3" id="KW-0699">rRNA-binding</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010254"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01345"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ68426.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="77" mass="8940" checksum="663D0128D42FE82E" modified="2015-12-09" version="1">MPKRILQGTVVSDANDKTVTVNVERRFTHPLLKKTVRRTKKYRAHDESNQYKVGDTVQIEECAPISKNKRWTVVTTQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A294</accession>
    <name>A0A0M7A294_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Fosfomycin resistance protein FosB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01800</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68592.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671523.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01800"/>
    <dbReference type="EnsemblBacteria" id="CTQ68592">
        <property type="protein sequence ID" value="CTQ68592"/>
        <property type="gene ID" value="LAX5112_01800"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.180.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029068">
        <property type="entry name" value="Glyas_Bleomycin-R_OHBP_Dase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004360">
        <property type="entry name" value="Glyas_Fos-R_dOase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037523">
        <property type="entry name" value="VOC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00903">
        <property type="entry name" value="Glyoxalase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54593">
        <property type="entry name" value="SSF54593"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51819">
        <property type="entry name" value="VOC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="VOC" evidence="1">
        <location>
            <begin position="21"/>
            <end position="146"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51819"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68592.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="154" mass="16589" checksum="57C23FD9C7F86EE0" modified="2015-12-09" version="1">MPIAESAVGTVSVSDRPKLDGILETAVYVDDMDAAHGFYEGILGLKRMVAGDRLFAYDAGPAQTLLVFYRGHTGEDVPTPGGIVPGHDTSGHGHFAFRILNDQLDPWRDYLSSKGVDIISEVVWPAGGTSLYFKDPDGNILELASAPLWPNFLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2P0</accession>
    <name>A0A0M7A2P0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Blue-light-activated histidine kinase 1</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01791</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68570.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671516.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01791"/>
    <dbReference type="EnsemblBacteria" id="CTQ68570">
        <property type="protein sequence ID" value="CTQ68570"/>
        <property type="gene ID" value="LAX5112_01791"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004673">
        <property type="term" value="F:protein histidine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd00130">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000014">
        <property type="entry name" value="PAS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035965">
        <property type="entry name" value="PAS-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13426">
        <property type="entry name" value="PAS_9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55785">
        <property type="entry name" value="SSF55785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00229">
        <property type="entry name" value="sensory_box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50112">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PAS" evidence="1">
        <location>
            <begin position="6"/>
            <end position="81"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50112"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68570.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="124" mass="14061" checksum="054145BC5827483A" modified="2015-12-09" version="1">MVTSLTDDQLRSLLETEEQDMSVVFSDPNVPDNPMIFVSDEFERQTGYTSAEAVGRNCRFLQGPETNPFAIEAIRQGLKAQTRFTIDVLNYRKDGMPFMNRLRIRPIIDGDGRLIFFAGAQNPV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A305</accession>
    <name>A0A0M7A305_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Gcv operon activator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">gcvA_8</name>
        <name evidence="3" type="ORF">LAX5112_01946</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68951.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671632.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01946"/>
    <dbReference type="EnsemblBacteria" id="CTQ68951">
        <property type="protein sequence ID" value="CTQ68951"/>
        <property type="gene ID" value="LAX5112_01946"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00039">
        <property type="entry name" value="HTHLYSR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ68951.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="310" mass="34142" checksum="0EB735CC54727748" modified="2015-12-09" version="1">MDKLSALSSFVNAVRLGSFSAAATHLGVSQPAVSQQVRSLEDTLGTRLINRTTRRLSLTEAGERYFAYASDILEKLSEADRSMQSNEAQMSGRLTVSLPYAFTEPELAGFLTKFKAAYPNILFDVQLSDAMVDLQKERIDVAIRMGHLRDDRLIVKKLGDMKRCLVASPDYLNRTRRPETPEDLKTHDFLLYPHIAEAGSIELVGPTGKAAKVAVSPTMVINNSAALRRAAIAGLGISTAVTWLSAPHFGTGELELILEDWSYGVHPIHAVYPSYRFIPMKVRQFVSDLQAHLDEQQAFADPTAHLAAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A336</accession>
    <name>A0A0M7A336_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02058</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69289.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671737.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ69289">
        <property type="protein sequence ID" value="CTQ69289"/>
        <property type="gene ID" value="LAX5112_02058"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="45"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69289.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="104" mass="11338" checksum="7EE41FF02E7C17B0" modified="2015-12-09" version="1">MQVQPIVAIRPPKIRQRPAADVPPAGDSETRSQPEFVPTSMETTPAVVATPVETKPHAYSERTAHLLITHQVYAQTALDRSSQMESYASANRSVHSVPSISFSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A373</accession>
    <name>A0A0M7A373_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Arogenate dehydrogenase</fullName>
            <ecNumber evidence="2">1.3.1.43</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">tyrC</name>
        <name evidence="2" type="ORF">LAX5112_02073</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.3.1.43" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69329.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671747.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02073"/>
    <dbReference type="EnsemblBacteria" id="CTQ69329">
        <property type="protein sequence ID" value="CTQ69329"/>
        <property type="gene ID" value="LAX5112_02073"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047794">
        <property type="term" value="F:cyclohexadienyl dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008977">
        <property type="term" value="F:prephenate dehydrogenase (NAD+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004665">
        <property type="term" value="F:prephenate dehydrogenase (NADP+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006571">
        <property type="term" value="P:tyrosine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008927">
        <property type="entry name" value="6-PGluconate_DH-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003099">
        <property type="entry name" value="Prephen_DH"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02153">
        <property type="entry name" value="PDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48179">
        <property type="entry name" value="SSF48179"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51176">
        <property type="entry name" value="PDH_ADH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Prephenate/arogenate dehydrogenase" evidence="1">
        <location>
            <begin position="8"/>
            <end position="297"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69329.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="307" mass="33138" checksum="CB4C69131486645C" modified="2015-12-09" version="1">MTNAPIFERMALIGIGLIGSSLAQAARQRDLVKEIAISTRSEATLRRAEELGLGDSYSVDAAVAVEGADLVILCVPVGANEAIAKWIAPALKKGAILTDAGSTKGSVVAQVAPHVPEGVHFIPGHPIAGTEQSGPDAGFPTLFDQRWCILTPPENTDPDALEKLKAFWQGCGSDVDLMDPKHHDLVLAIVSHLPHVIAYNIVGTADDLEAVTKSEVIKYSASGFRDFTRLAASDPIMWRDVCLNNKDAILEMLARFSEDLSALQRAIRWGDGDKLFEMFTRTRSIRRSIIEAGQETDAPDFGRHSGD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4N4</accession>
    <name>A0A0M7A4N4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Lipopolysaccharide export system ATP-binding protein LptB</fullName>
            <ecNumber evidence="5">3.6.3.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">lptB_4</name>
        <name evidence="5" type="ORF">LAX5112_02157</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.6.3.-" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69551.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671810.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02157"/>
    <dbReference type="EnsemblBacteria" id="CTQ69551">
        <property type="protein sequence ID" value="CTQ69551"/>
        <property type="gene ID" value="LAX5112_02157"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="4"/>
            <end position="237"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="36"/>
            <end position="43"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ69551.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="239" mass="25748" checksum="3C3B1286B62C42C2" modified="2015-12-09" version="1">MAVLALDNVSKSFGALKVSQHITFELLEGEALGVIGPNGAGKSTLFNLITGNIDVDDGQIEFLGRIVTRVPPMERCLSGLGRTFQIPQPFEKLTVFENLIVAGAFGNRLPESEVADQCADILVETGLIGKANELAGRLSLLERKRLELARAMATQPKVLLLDEIAGGLTEGECHALVATIQKIHTSGMSIIWIEHVLHALTSVAERLLVLDFGKVIGVGEPDAIMNSKEVREIYLGLEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4P6</accession>
    <name>A0A0M7A4P6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Ribosomal RNA small subunit methyltransferase D</fullName>
            <ecNumber evidence="3">2.1.1.171</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">rsmD</name>
        <name evidence="3" type="ORF">LAX5112_02334</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.1.1.171" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70048.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451548.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02334"/>
    <dbReference type="EnsemblBacteria" id="CTQ70048">
        <property type="protein sequence ID" value="CTQ70048"/>
        <property type="gene ID" value="LAX5112_02334"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052913">
        <property type="term" value="F:16S rRNA (guanine(966)-N(2))-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002052">
        <property type="entry name" value="DNA_methylase_N6_adenine_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004398">
        <property type="entry name" value="RNA_MeTrfase_RsmD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004553">
        <property type="entry name" value="CHP00095"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00095">
        <property type="entry name" value="TIGR00095"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00092">
        <property type="entry name" value="N6_MTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 3" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ70048.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="186" mass="19995" checksum="9853C59063AFEBBF" modified="2015-12-09" version="1">MRIVAGRFKGAALAAPKSNATRPTSDRLRETVFNILAHGLEFEIDGCRVLDLFAGTGALGFEAISRGARHCTFIEEAAEPRGVIRRNMESLGLNGAAKIFRRDATKLGEPGTIEPFDLVFADPPYDKGLGEKALGSAATGGWLKPSAICILEERGSADVDAPEGFTELDRRKAGDSQVLFLRFDQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4Z0</accession>
    <name>A0A0M7A4Z0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcriptional regulator, effector-binding domain/component</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01885</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68783.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671583.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01885"/>
    <dbReference type="EnsemblBacteria" id="CTQ68783">
        <property type="protein sequence ID" value="CTQ68783"/>
        <property type="gene ID" value="LAX5112_01885"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.80.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010499">
        <property type="entry name" value="AraC_E-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029442">
        <property type="entry name" value="GyrI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011256">
        <property type="entry name" value="Reg_factor_effector_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06445">
        <property type="entry name" value="GyrI-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00871">
        <property type="entry name" value="AraC_E_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55136">
        <property type="entry name" value="SSF55136"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AraC_E_bind" evidence="1">
        <location>
            <begin position="2"/>
            <end position="155"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00871"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68783.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="155" mass="17403" checksum="7E0FFCC5D5C8A93F" modified="2015-12-09" version="1">MPDFKTITVEETPYLFQEATCSMDPADIGTTMGKIFQSVWAFIQKNRIETSGKVLAVYYTYNPETMTFRAGFSVSPDAANKAEAPIQFDRTPAGTVVYFQHKGAYSTLRDSYGEMMSWMEKERLTMGAPAWEVYLNDPATTPEDALLTDVYVSLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="32" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A504</accession>
    <name>A0A0M7A504_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Tyrosine--tRNA ligase</fullName>
            <ecNumber evidence="7">6.1.1.1</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Tyrosyl-tRNA synthetase</fullName>
            <shortName evidence="7">TyrRS</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="10" type="primary">tyrS_1</name>
        <name evidence="7" type="synonym">tyrS</name>
        <name evidence="10" type="ORF">LAX5112_02390</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>ATP + L-tyrosine + tRNA(Tyr) = AMP + diphosphate + H(+) + L-tyrosyl-tRNA(Tyr)</text>
            <dbReference type="Rhea" id="RHEA:10220"/>
            <dbReference type="Rhea" id="RHEA-COMP:9706"/>
            <dbReference type="Rhea" id="RHEA-COMP:9707"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:58315"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78536"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.1"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="7">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.1" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70168.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672007.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02390"/>
    <dbReference type="EnsemblBacteria" id="CTQ70168">
        <property type="protein sequence ID" value="CTQ70168"/>
        <property type="gene ID" value="LAX5112_02390"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004601">
        <property type="term" value="F:peroxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004831">
        <property type="term" value="F:tyrosine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006979">
        <property type="term" value="P:response to oxidative stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006437">
        <property type="term" value="P:tyrosyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00165">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00805">
        <property type="entry name" value="TyrRS_core"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.290.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02006">
        <property type="entry name" value="Tyr_tRNA_synth_type1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002305">
        <property type="entry name" value="aa-tRNA-synth_Ic"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002016">
        <property type="entry name" value="Haem_peroxidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002942">
        <property type="entry name" value="S4_RNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036986">
        <property type="entry name" value="S4_RNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002307">
        <property type="entry name" value="Tyr-tRNA-ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024088">
        <property type="entry name" value="Tyr-tRNA-ligase_bac-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024107">
        <property type="entry name" value="Tyr-tRNA-ligase_bac_1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11766">
        <property type="entry name" value="PTHR11766"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01479">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00579">
        <property type="entry name" value="tRNA-synt_1b"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01040">
        <property type="entry name" value="TRNASYNTHTYR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00363">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00234">
        <property type="entry name" value="tyrS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50873">
        <property type="entry name" value="PEROXIDASE_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7 8" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="4 7 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2 7 8" id="KW-0436">Ligase</keyword>
    <keyword evidence="3 7 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5 7 8" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PEROXIDASE_4" evidence="9">
        <location>
            <begin position="127"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="'HIGH' region" evidence="7">
        <location>
            <begin position="55"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="'KMSKS' region" evidence="7">
        <location>
            <begin position="245"/>
            <end position="249"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="50"/>
        </location>
        <ligand>
            <name>L-tyrosine</name>
            <dbReference type="ChEBI" id="CHEBI:58315"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="186"/>
        </location>
        <ligand>
            <name>L-tyrosine</name>
            <dbReference type="ChEBI" id="CHEBI:58315"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="190"/>
        </location>
        <ligand>
            <name>L-tyrosine</name>
            <dbReference type="ChEBI" id="CHEBI:58315"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="248"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000069"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02006"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU363036"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50873"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ70168.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="425" mass="46758" checksum="D325DDD9FCE49944" modified="2015-12-09" version="1">MTKHMIEAGKPATKLKSEALAVLLERGLVHQSTDLEALDQRLNDSPITAYAGFDATAASLHVGHLMPLMTLRWLQRLGHRPIVVLGGGTSQVGDPSFRNDARPLLEERQIAANMATIRRSVERLVDMDGPEGALLVDNAEWLNEFRFLEFLRDYGSQFTVNRMMTFDSVKSRLDAQMPLTILEFCYMMLQAVDFLELAKRHDCVLQVGGSDQWGNIVNGVELGRRDGRKLHGLTVPLLTTANGSKMGKTAAGAVWLHPEHLSPFGFWQFWRNTADADVAKFLRLFTELPMREVERLSELQGAELNEAKKILATQVTAIVHGPEEARVALEQGDALFSGDAELTEPTHTMALSVLAEGVGLLELVVASGFAASNGEARRLVEGGGVRLNNRVVDDARRRISSGDLGANDRLSLSVGKRRKALIGFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A565</accession>
    <name>A0A0M7A565_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02415</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70218.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70218">
        <property type="protein sequence ID" value="CTQ70218"/>
        <property type="gene ID" value="LAX5112_02415"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021516">
        <property type="entry name" value="DUF3179"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11376">
        <property type="entry name" value="DUF3179"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ70218.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="481" mass="52483" checksum="EE5E1741B1AC151C" modified="2015-12-09" version="1">MQCHRGPVGRVLGVFRKGAAMKSSHRAVAHILIAALIPLLALVGGGLAQAQERSALPDYVIEKFGTPPAIPDGPLSDDLKRAVKMALVDPVTHAGWGQGQSLALAEVAASKDPRLVWIISDLMRFATGPQLNQALSEAASELLGKEIPLRNSWGVVTDHLMAWDIPAPPDYLASKREIFTTIVPGWDRIFVEGEIDWRLVSWGGVLIDDRPYDQTDNQCNCIPAADNPEVSSAEDATWLKDSDIVFGIGVNGDYRAYPRRIMEVREMVNDTLGGRALGIPYCTLCGAAQAYLTDELPEGIERPVLRTSGLLIRSNKVMYDVNTYSVFDTFLGTAVTGSLAEKNLKLKQVSVVTTDWGTWKRAHPETTVLVEALALGRDFDFRNGRDANGPIFPIGDVDPRLPVHEDIIGVVTSSGQPVAFQRSKAFAALKQGTEIRVQNVRLELDAGGIRAVGEDGADLGSHEAFWFAWSQFYPDTELWDG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5K3</accession>
    <name>A0A0M7A5K3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">SNARE associated Golgi protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02218</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69706.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008196442.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02218"/>
    <dbReference type="EnsemblBacteria" id="CTQ69706">
        <property type="protein sequence ID" value="CTQ69706"/>
        <property type="gene ID" value="LAX5112_02218"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032816">
        <property type="entry name" value="SNARE_assoc"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09335">
        <property type="entry name" value="SNARE_assoc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="52"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="98"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="132"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="171"/>
            <end position="189"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69706.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="192" mass="21565" checksum="C449AB999ECBA82F" modified="2015-12-09" version="1">MIRRLYDWTLSLAAGPRAPTALGSVSFVESSFFPIPPDILLIPMVIARREKAWWYALLCTLTSVAGGVFGYFIGMFLFEQVAQPVLAFYGKLHYVEEFRHIFAEWGWWFVFIAGVTPFPYKVITIASGAAGLSLPIFILASIVSRGIRFFIVAGLLYFFGPPIKDFIEKRLSLMFTLFVVLLVGGFAALKFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A608</accession>
    <name>A0A0M7A608_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Cation efflux system protein CusA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">cusA</name>
        <name evidence="4" type="ORF">LAX5112_02209</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69680.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671848.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02209"/>
    <dbReference type="EnsemblBacteria" id="CTQ69680">
        <property type="protein sequence ID" value="CTQ69680"/>
        <property type="gene ID" value="LAX5112_02209"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008324">
        <property type="term" value="F:cation transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.2090.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027463">
        <property type="entry name" value="AcrB_DN_DC_subdom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001036">
        <property type="entry name" value="Acrflvin-R"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004763">
        <property type="entry name" value="CzcA/CusA/SilA/NccA/HelA/CnrA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32063">
        <property type="entry name" value="PTHR32063"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00873">
        <property type="entry name" value="ACR_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00702">
        <property type="entry name" value="ACRIFLAVINRP"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82714">
        <property type="entry name" value="SSF82714"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00914">
        <property type="entry name" value="2A0601"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="342"/>
            <end position="358"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="365"/>
            <end position="384"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="390"/>
            <end position="414"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="435"/>
            <end position="457"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="477"/>
            <end position="499"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="520"/>
            <end position="545"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="867"/>
            <end position="884"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="891"/>
            <end position="909"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="915"/>
            <end position="941"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="980"/>
            <end position="995"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="1007"/>
            <end position="1033"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010942"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ69680.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="1059" mass="115537" checksum="863BF53202C36A04" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6K4</accession>
    <name>A0A0M7A6K4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02353</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70092.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70092">
        <property type="protein sequence ID" value="CTQ70092"/>
        <property type="gene ID" value="LAX5112_02353"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ70092.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="172" mass="19180" checksum="EA25D56BCA6D3CCD" modified="2015-12-09" version="1">MKAPVFTLLLASIIVVRFLVLLDTMGKTDRFITRLPSQIETEGLLMRETRTGMLNGLIPDYCGINVIRITDATAERLKNGGLTFLKEATRSRWSSRPNTQTVFYEPWRTITPSQSIGDSFVMSVMSCAGSLNIPFHEIIAGIKSGGGFVSSGRGPNYYLLPEQRLFVHVFMD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7Q4</accession>
    <name>A0A0M7A7Q4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Flagellin</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">LAX5112_02748</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Secreted</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="3">Bacterial flagellum</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the bacterial flagellin family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71185.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008189299.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02748"/>
    <dbReference type="EnsemblBacteria" id="CTQ71185">
        <property type="protein sequence ID" value="CTQ71185"/>
        <property type="gene ID" value="LAX5112_02748"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009288">
        <property type="term" value="C:bacterial-type flagellum"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005198">
        <property type="term" value="F:structural molecule activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001492">
        <property type="entry name" value="Flagellin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046358">
        <property type="entry name" value="Flagellin_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001029">
        <property type="entry name" value="Flagellin_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42792">
        <property type="entry name" value="PTHR42792"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00700">
        <property type="entry name" value="Flagellin_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00669">
        <property type="entry name" value="Flagellin_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3" id="KW-0975">Bacterial flagellum</keyword>
    <keyword evidence="6" id="KW-0966">Cell projection</keyword>
    <keyword evidence="6" id="KW-0969">Cilium</keyword>
    <keyword evidence="6" id="KW-0282">Flagellum</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0964">Secreted</keyword>
    <feature type="domain" description="Flagellin_N" evidence="4">
        <location>
            <begin position="15"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="domain" description="Flagellin_C" evidence="5">
        <location>
            <begin position="411"/>
            <end position="495"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005709"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023143"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU362073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00669"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00700"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ71185.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="496" mass="51788" checksum="F268CBFF29915ACA" modified="2015-12-09" version="1">MPDIVLSSAVRDNLLSLKKTAAFQETTQNRLATGLKVNSALDNPNSYFTAQSLNDRAGDLSNLLDNMGQAVQTLRAADDGITSITKLVESAKAIANQALQTSSEYERRQFAVQYNAILEQIEDMAKDSGYKGKNLLAGAGNELEVIFNEDSTSNLTVNPVDFTDTTLDTGLNLDDLATGASGTSSFNMYGGSAQLTLTGLQASSNLTDLAAFADNNHVMVTDGSTTTTLTVGVDIVTVQDYVDALDDLSGVHASFDETTDSITLVTGLNSNITVTKDANGGGSTSDGGITAGATTLTATALSSTATLITSGGFKAGDTITITDGNGFEPASLEIDEETTVDDLVKLINNVKGLDATFSGGSISLIGEVSFDITSDNADFNRMRLASTSGTVALGATASEFKTDTDIERVLQAINASLDELRNSARSLGTALSTVEIRTDFTQNIINTLEVGAGDLTIADMNEEGANMLALQTRQQLSSTALSLANQAEQSVLSLFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="32" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7Z3</accession>
    <name>A0A0M7A7Z3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 10 11">Chromosomal replication initiator protein DnaA</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="primary">dnaA_1</name>
        <name evidence="10" type="synonym">dnaA</name>
        <name evidence="15" type="ORF">LAX5112_02481</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9 10 11">Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'-TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 10">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 10 12">Belongs to the DnaA family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70360.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672142.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02481"/>
    <dbReference type="EnsemblBacteria" id="CTQ70360">
        <property type="protein sequence ID" value="CTQ70360"/>
        <property type="gene ID" value="LAX5112_02481"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003688">
        <property type="term" value="F:DNA replication origin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006270">
        <property type="term" value="P:DNA replication initiation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006275">
        <property type="term" value="P:regulation of DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd06571">
        <property type="entry name" value="Bac_DnaA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1750.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.180">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00377">
        <property type="entry name" value="DnaA_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001957">
        <property type="entry name" value="Chromosome_initiator_DnaA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020591">
        <property type="entry name" value="Chromosome_initiator_DnaA-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018312">
        <property type="entry name" value="Chromosome_initiator_DnaA_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013317">
        <property type="entry name" value="DnaA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013159">
        <property type="entry name" value="DnaA_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024633">
        <property type="entry name" value="DnaA_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038454">
        <property type="entry name" value="DnaA_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010921">
        <property type="entry name" value="Trp_repressor/repl_initiator"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30050:SF2">
        <property type="entry name" value="PTHR30050:SF2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00308">
        <property type="entry name" value="Bac_DnaA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08299">
        <property type="entry name" value="Bac_DnaA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11638">
        <property type="entry name" value="DnaA_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00051">
        <property type="entry name" value="DNAA"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00760">
        <property type="entry name" value="Bac_DnaA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48295">
        <property type="entry name" value="SSF48295"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00362">
        <property type="entry name" value="DnaA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01008">
        <property type="entry name" value="DNAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 10 11" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 10" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 10 11" id="KW-0235">DNA replication</keyword>
    <keyword evidence="8 10 11" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6 10 11" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA" evidence="13">
        <location>
            <begin position="180"/>
            <end position="306"/>
        </location>
    </feature>
    <feature type="domain" description="Bac_DnaA_C" evidence="14">
        <location>
            <begin position="394"/>
            <end position="463"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <begin position="188"/>
            <end position="195"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006583"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00018893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00024640"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00377"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU000577"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU004227"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="SMART" id="SM00760"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="CTQ70360.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="486" mass="53992" checksum="98B8D431DD0A61F5" modified="2015-12-09" version="1">MQVQTLQVSDPWDRVKAELKNELGEDIFSNWFGRVKHEETNGDAVRLSVPTPFLKNWILSNYEKQLVNLWQRQHDDISRVELTVRGALRPRPAGSQAPKPIKARRISGRAAPFATNPQFGSVNTVASIPCLADTGEDAAADFLNGAALNPKLTFDTFAEGTSNSLACAAVRQMAAGHDGSLGLLYIHSSTGIGKTHLLQAAATEARKGGRRVAYLSAEFFMYHLVPALRTPAYPVLRQAMKSIDLLLIDDLQFLHGKQGHEEFGKTLEMLMESPMKIIMAADRAPDEMSTLGGTVRQRIQTGEVVTIQATDYALRHDILKKRIFSARRTHPGFTVPDEVIDYIARYVISSARDLEGALNRLFAHNQLTKQPVTMQLAEKTLHDLVRIGEPRSIKVEDIQNVVCKHFSVTKADLLSSCRARTLVRPRQIAMYIAKVMTGRSLPEIGRRFGNRDHTTVLHAVRKIESMVAGDAALAQEVELLKRLVHA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8B1</accession>
    <name>A0A0M7A8B1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02283</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69864.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ69864">
        <property type="protein sequence ID" value="CTQ69864"/>
        <property type="gene ID" value="LAX5112_02283"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="141"/>
            <end position="162"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69864.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="193" mass="21225" checksum="A27BB96FAEE85FCF" modified="2015-12-09" version="1">MQCVFLHSSKGPPDRELLPRFGPGLETETAQADTAQTDCARTKSAARNLLRRFCCVASCPAQEWRGAPGFALRYLFKMFLRQKLSRPARAVSHGNGGSDLRTDAWVLPPPHRALRSRTAPPGSTVPGIIDHRTCQERTVTSFPQPRPACSLPRDGPPESLLNRHGRSIRAGVRGVDKISLRLRPGLCAKPTRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8D7</accession>
    <name>A0A0M7A8D7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Lipoprotein signal peptidase</fullName>
            <ecNumber evidence="6">3.4.23.36</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Prolipoprotein signal peptidase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">Signal peptidase II</fullName>
            <shortName evidence="6">SPase II</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6 9" type="primary">lspA</name>
        <name evidence="9" type="ORF">LAX5112_02317</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6 7">This protein specifically catalyzes the removal of signal peptides from prolipoproteins.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6 7">
            <text>Release of signal peptides from bacterial membrane prolipoproteins. Hydrolyzes -Xaa-Yaa-Zaa-|-(S,diacylglyceryl)Cys-, in which Xaa is hydrophobic (preferably Leu), and Yaa (Ala or Ser) and Zaa (Gly or Ala) have small, neutral side chains.</text>
            <dbReference type="EC" id="3.4.23.36"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="6">Protein modification; lipoprotein biosynthesis (signal peptide cleavage).</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cell membrane</location>
            <topology evidence="6">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 6 8">Belongs to the peptidase A8 family.</text>
    </comment>
    <dbReference type="EC" id="3.4.23.36" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70003.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671948.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02317"/>
    <dbReference type="EnsemblBacteria" id="CTQ70003">
        <property type="protein sequence ID" value="CTQ70003"/>
        <property type="gene ID" value="LAX5112_02317"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00665"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004190">
        <property type="term" value="F:aspartic-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00161">
        <property type="entry name" value="LspA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001872">
        <property type="entry name" value="Peptidase_A8"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33695">
        <property type="entry name" value="PTHR33695"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01252">
        <property type="entry name" value="Peptidase_A8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00781">
        <property type="entry name" value="LIPOSIGPTASE"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00077">
        <property type="entry name" value="lspA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00855">
        <property type="entry name" value="SPASE_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 6 7" id="KW-0064">Aspartyl protease</keyword>
    <keyword evidence="2 6" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 6 7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="9" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="6 7" id="KW-0645">Protease</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="16"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="82"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="109"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="146"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="active site" evidence="6">
        <location>
            <position position="136"/>
        </location>
    </feature>
    <feature type="active site" evidence="6">
        <location>
            <position position="154"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006139"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022750"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00161"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU000594"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU004181"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ70003.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="178" mass="19219" checksum="77F4242113B7EDA5" modified="2015-12-09" version="1">MTNGSDNSDHPAKPTYVWGGLSWLVLTVAAICLILDQATKIWFVHGFDLAANGPVRVLPVLDFVLVWNRGISYGLFQQDSDLGRWLLAGFTIAATIALWIWSTRVDLKLPALALALIIGGAVGNGVDRVVYGAVVDFVHFHAGTFSWYVFNLADVWIVAGVVGLLYDSFANGPNSAAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8H1</accession>
    <name>A0A0M7A8H1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">HD domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02650</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70911.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672221.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02650"/>
    <dbReference type="EnsemblBacteria" id="CTQ70911">
        <property type="protein sequence ID" value="CTQ70911"/>
        <property type="gene ID" value="LAX5112_02650"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0002953">
        <property type="term" value="F:5'-deoxynucleotidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006674">
        <property type="entry name" value="HD_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039356">
        <property type="entry name" value="YfbR/HDDC2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11845">
        <property type="entry name" value="PTHR11845"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13023">
        <property type="entry name" value="HD_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HD" evidence="1">
        <location>
            <begin position="17"/>
            <end position="176"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70911.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="195" mass="22074" checksum="9E3A5A7305CC8D24" modified="2015-12-09" version="1">MTPDDLGRQVAFLLESDKLKDVIRLNMVSDGSRRETTAEHCWHVILQTLTLAEYAEPGTDIHHVLKLLAVHDLVEIEAGDHWVTEDNHQDISIKEQAAAEKIFALLPSEQSHDFKALWHEFEANETKEARFANAMDVLHPMLLVFASEQDTPVHEPMSVEDIRKKKEAKLAPFPALWAYAQSLLDRAVQAGHLTP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8N1</accession>
    <name>A0A0M7A8N1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">CysZ-like protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02833</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71468.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672428.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02833"/>
    <dbReference type="EnsemblBacteria" id="CTQ71468">
        <property type="protein sequence ID" value="CTQ71468"/>
        <property type="gene ID" value="LAX5112_02833"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="60"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="119"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="181"/>
            <end position="208"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71468.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="227" mass="24852" checksum="BB0D99CAB2AA5F0A" modified="2015-12-09" version="1">MFQSASRAMSQVFERPFRAVFWKMLGFTLAVLVVIWIALQGLVAGFVALPYPWLETALSVLTGIGAVFALGFLIAPISALFAGLFQDEIAEIVEARDYSGDRPGEALPLSKSIPQTIKFTGVVILGNLFALLLLLVPGINLVAFFLVNGYLLGREFFEFAAMRFMQPEEARAFRKARGGTVFLGGLVIAGLLAVPILNLVTPIFATLFMMHLYKRLERGGGKAQFSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AA13</accession>
    <name>A0A0M7AA13_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Nucleoid-associated protein LAX5112_02829</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ybaB</name>
        <name evidence="2" type="ORF">LAX5112_02829</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.</text>
    </comment>
    <comment type="subunit">
        <text evidence="1">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
            <location evidence="1">Nucleoid</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the YbaB/EbfC family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71457.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672361.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02829"/>
    <dbReference type="EnsemblBacteria" id="CTQ71457">
        <property type="protein sequence ID" value="CTQ71457"/>
        <property type="gene ID" value="LAX5112_02829"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043590">
        <property type="term" value="C:bacterial nucleoid"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1310.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00274">
        <property type="entry name" value="DNA_YbaB_EbfC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036894">
        <property type="entry name" value="YbaB-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004401">
        <property type="entry name" value="YbaB/EbfC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33449">
        <property type="entry name" value="PTHR33449"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02575">
        <property type="entry name" value="YbaB_DNA_bd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004555">
        <property type="entry name" value="UCP004555"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82607">
        <property type="entry name" value="SSF82607"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00103">
        <property type="entry name" value="DNA_YbaB_EbfC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71457.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="106" mass="11439" checksum="B340DA3C302797BA" modified="2015-12-09" version="1">MDFLKMMKQAKEMQEQMGSLQGQIEDIEAEGSSGAGLVTVRLNGKGELKSLTIDSSLMKEGEGEILEDLIVAAHTDGRVKIDQAIQEKTQEMMGGLGLPAGMKLPF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAD3</accession>
    <name>A0A0M7AAD3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Chemotaxis protein CheY</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">cheY_3</name>
        <name evidence="4" type="ORF">LAX5112_03055</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72105.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03055"/>
    <dbReference type="EnsemblBacteria" id="CTQ72105">
        <property type="protein sequence ID" value="CTQ72105"/>
        <property type="gene ID" value="LAX5112_03055"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="3">
        <location>
            <begin position="9"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="153"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="1">
        <location>
            <position position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ72105.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="178" mass="19593" checksum="095D3D6954954DBA" modified="2015-12-09" version="1">MSLDLASLTFLLVEDSAYMRTILRTMLQGFGARRIVEAEDGASGLEAMDRANPDILILDWVMPILDGADMVRMIRSPNNPFAYIPIIMVTAHTERSRIVEARRLGVHELLSKPISAKALYQRVSSVIVQPRDFIKTATYFGPAPREIRNRQKIWQGGPGEQPGGDQGNGDDGAVTAIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAK7</accession>
    <name>A0A0M7AAK7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative peroxidase-related enzyme</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02599</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70753.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672299.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02599"/>
    <dbReference type="EnsemblBacteria" id="CTQ70753">
        <property type="protein sequence ID" value="CTQ70753"/>
        <property type="gene ID" value="LAX5112_02599"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004601">
        <property type="term" value="F:peroxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051920">
        <property type="term" value="F:peroxiredoxin activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1290.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029032">
        <property type="entry name" value="AhpD-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003779">
        <property type="entry name" value="CMD-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02627">
        <property type="entry name" value="CMD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69118">
        <property type="entry name" value="SSF69118"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-0575">Peroxidase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CMD" evidence="1">
        <location>
            <begin position="41"/>
            <end position="105"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02627"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70753.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="189" mass="21273" checksum="10235E635B29C64F" modified="2015-12-09" version="1">MTDFQLHTKETAPEGGAELLERSEKAFGRIPGLHAVMSESPQHLEAYQKLHELFQQTSLSTVEQNVVWLTINVEHECHYCVPAHTGIAHMQKVPQDVIDALRDNTSLADPRLESLRDFTLKVVRQRGNVSDADVQTFLDAGFTKRNVLDIILGLAQKVMSNYVNHLAETPVDKVFEKFAWTPPAREAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAN0</accession>
    <name>A0A0M7AAN0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Degradation activator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">degA_3</name>
        <name evidence="6" type="ORF">LAX5112_03081</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72168.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672568.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03081"/>
    <dbReference type="EnsemblBacteria" id="CTQ72168">
        <property type="protein sequence ID" value="CTQ72168"/>
        <property type="gene ID" value="LAX5112_03081"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01392">
        <property type="entry name" value="HTH_LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000843">
        <property type="entry name" value="HTH_LacI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001761">
        <property type="entry name" value="Peripla_BP/Lac1_sug-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00356">
        <property type="entry name" value="LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00532">
        <property type="entry name" value="Peripla_BP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00354">
        <property type="entry name" value="HTH_LACI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50932">
        <property type="entry name" value="HTH_LACI_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH lacI-type" evidence="5">
        <location>
            <begin position="22"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ72168.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="363" mass="39220" checksum="F7C0E94583BC9614" modified="2015-12-09" version="1">MPDSENNKSRTPEGTQKPGKRLTLGHIADQLGISTATVSLALRDSPLVAEETRAKVKQTAEEIGYIYNRSAASLRTSRSQIVGVAVHDILNPFFAEVFSALEDVLEEQGQMIFICNHRDDVKRQKAFVNTLLQHRADGLILCPSVGTSAEEINRLVDQGIPVTLVAREVPGVWAPCVRGDDEAGMYQITKHLIDQGHSQIAMLGGRRDSSTGRYRHTGWRQAMLDAGLDPDAQVDMPELMTQADGRSAVPAILGAAERPTAAVCFNDLVAFGMMTTLRRAGVEPGPEMAITGYDDIDGADARTPALTTVGAQPDKIGRLAALTLLRQIAGDRVPNTPIVIEPQLRVRESSPPPGVRLAPQLPD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABL1</accession>
    <name>A0A0M7ABL1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Putative inner membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">LAX5112_03017</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the autoinducer-2 exporter (AI-2E) (TC 2.A.86) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72037.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03017"/>
    <dbReference type="EnsemblBacteria" id="CTQ72037">
        <property type="protein sequence ID" value="CTQ72037"/>
        <property type="gene ID" value="LAX5112_03017"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002549">
        <property type="entry name" value="AI-2E-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21716">
        <property type="entry name" value="PTHR21716"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01594">
        <property type="entry name" value="AI-2E_transport"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="60"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="93"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="190"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="244"/>
            <end position="264"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="270"/>
            <end position="289"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="301"/>
            <end position="321"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="333"/>
            <end position="364"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="9"/>
            <end position="30"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009773"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ72037.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="377" mass="39861" checksum="85A8659414047F2E" modified="2015-12-09" version="1">MRFDTFYGRGSMTDQSPSEPSGSSQSKPEPTVDARVIDIAIRLGVLGVFAYFSLQLVAPFFAFLLWAVVLTVALYPAYAWLTGKLGGRKVLSATILTLIGLGIVIGPVAVLVVSLVETLQRFYEGVTSGAIAVPPLPPKLAELPMVGEKIAEFWQLASRSLEQFLTKIGPMVAPAGTKILSVLASLSGSVLFFIVSIILSGCLFVPGPALASGAKRFADRIIAPRGGEFVDLAGATIRNVSRGVIGVAVIQGLLTGVILIAFAVPLAGLLTFAALILCIIQIGPALVILPTIIWTWSSWELLPALLFTVLIVPVMLVDNVLRPILMSRGLDVPMLVILIGVLGGTLAYGLIGLFLGPVILSVFYELVIAWVKAGEEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AD01</accession>
    <name>A0A0M7AD01_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Transcriptional regulatory protein UhpA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">uhpA_1</name>
        <name evidence="3" type="ORF">LAX5112_03280</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72749.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672708.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72749">
        <property type="protein sequence ID" value="CTQ72749"/>
        <property type="gene ID" value="LAX5112_03280"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06170">
        <property type="entry name" value="LuxR_C_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00130">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000014">
        <property type="entry name" value="PAS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035965">
        <property type="entry name" value="PAS-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016032">
        <property type="entry name" value="Sig_transdc_resp-reg_C-effctor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000792">
        <property type="entry name" value="Tscrpt_reg_LuxR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00196">
        <property type="entry name" value="GerE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13426">
        <property type="entry name" value="PAS_9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00038">
        <property type="entry name" value="HTHLUXR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00421">
        <property type="entry name" value="HTH_LUXR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46894">
        <property type="entry name" value="SSF46894"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55785">
        <property type="entry name" value="SSF55785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00229">
        <property type="entry name" value="sensory_box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00622">
        <property type="entry name" value="HTH_LUXR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50043">
        <property type="entry name" value="HTH_LUXR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH luxR-type" evidence="2">
        <location>
            <begin position="115"/>
            <end position="180"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ72749.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="181" mass="20285" checksum="ECEAB8DD6F59A223" modified="2015-12-09" version="1">MEELAALAFEHAPIGLVYSEDRTIRKCNPRFAAMFEYDTGALTGVSLSVLYPSSEEFLRIGKIGVSKMLGGGTYQDERIMRRKSGTLFWCRVRGQSLDPDHPFAKAVWSFADISEDRPLADMSVRERQVATMLAEGLTSKEIARALDISHRTVEVHRSRLMKKFNARNSLELIAHIAGVPV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AD24</accession>
    <name>A0A0M7AD24_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">LIV-I protein H</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">livH_9</name>
        <name evidence="8" type="ORF">LAX5112_03063</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72120.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672536.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03063"/>
    <dbReference type="EnsemblBacteria" id="CTQ72120">
        <property type="protein sequence ID" value="CTQ72120"/>
        <property type="gene ID" value="LAX5112_03063"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001851">
        <property type="entry name" value="ABC_transp_permease"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017779">
        <property type="entry name" value="ABC_UrtB_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02653">
        <property type="entry name" value="BPD_transp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="SSF48371"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03409">
        <property type="entry name" value="urea_trans_UrtB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0732">Signal</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="7">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809409" evidence="7">
        <location>
            <begin position="24"/>
            <end position="539"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="247"/>
            <end position="274"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="281"/>
            <end position="300"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="306"/>
            <end position="326"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="389"/>
            <end position="406"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="433"/>
            <end position="453"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="473"/>
            <end position="497"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="504"/>
            <end position="522"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ72120.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="539" mass="57640" checksum="1B46F048CF069BF5" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AD46</accession>
    <name>A0A0M7AD46_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">UDP-glucose 4-epimerase</fullName>
            <ecNumber evidence="3">5.1.3.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">galE_3</name>
        <name evidence="3" type="ORF">LAX5112_03307</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the NAD(P)-dependent epimerase/dehydratase family.</text>
    </comment>
    <dbReference type="EC" id="5.1.3.2" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72799.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672729.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03307"/>
    <dbReference type="EnsemblBacteria" id="CTQ72799">
        <property type="protein sequence ID" value="CTQ72799"/>
        <property type="gene ID" value="LAX5112_03307"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003978">
        <property type="term" value="F:UDP-glucose 4-epimerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001509">
        <property type="entry name" value="Epimerase_deHydtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01370">
        <property type="entry name" value="Epimerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0413">Isomerase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Epimerase" evidence="2">
        <location>
            <begin position="4"/>
            <end position="224"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007637"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ72799.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="309" mass="33789" checksum="D4275D04660489B4" modified="2015-12-09" version="1">MSRILITGAAGMIGQRLVQLLVRSGHEVIATDIGPRPSLPNGAIWRKMDVRGRDPEQVITEDRPDAVIHLASILEPKDRQLAYEVDVIGTCNVVDACIAAKVRRLVVTSSGAAYGYHADNPDWLTETDPLRGNPEFAYSDHKRQAEQVLAEARRNAPQLEQVILRVCTVLGTGVENQITSLFRNARLLGLSGSDSPFVFIWTEDLARILERAATDGPPGIYNVAGDGALSMTELAAHLKKPLIRVPAALVKAALTIAQPLGLSRFGAEQVRFLQFRPVLDNTALKTEFGYTPQMTSAEVFDLWCREAGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AD95</accession>
    <name>A0A0M7AD95_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Stf0 sulphotransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03420</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ73058.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672817.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03420"/>
    <dbReference type="EnsemblBacteria" id="CTQ73058">
        <property type="protein sequence ID" value="CTQ73058"/>
        <property type="gene ID" value="LAX5112_03420"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015124">
        <property type="entry name" value="Stf0"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024628">
        <property type="entry name" value="Sulfotransferase_Stf0_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09037">
        <property type="entry name" value="Sulphotransf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF021497">
        <property type="entry name" value="Sulphotransferase_Stf0"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Sulphotransf" evidence="1">
        <location>
            <begin position="6"/>
            <end position="247"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF09037"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73058.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="254" mass="28208" checksum="2C1DC6ADACB8CD73" modified="2015-12-09" version="1">MSDFQSYVLCTSPRSGSTLLCKMLTETGVAGHPKSYFHKPKLGEWASYVGVSRSAGMGELEYLRLLIDTAIEQGTANTGMFGLRLQRHSFDFFFRQLRTLCQDEPTDKARFEAVFGRTLFVHLTRPDKLSQAVSYVKAQQSGLWHRAADGSELERLSPPADPVFDFEALKGCRDQFVTFDRDWNDWFAEQAIEPLRLSYDDLCAGPQAGLKKVLTALGLPQSAADSVQPGVAKLADGINADWIKRFLDQAATGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADA5</accession>
    <name>A0A0M7ADA5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Copper outer membrane regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">comR_3</name>
        <name evidence="3" type="ORF">LAX5112_03243</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72611.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672666.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72611">
        <property type="protein sequence ID" value="CTQ72611"/>
        <property type="gene ID" value="LAX5112_03243"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036271">
        <property type="entry name" value="Tet_transcr_reg_TetR-rel_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00440">
        <property type="entry name" value="TetR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48498">
        <property type="entry name" value="SSF48498"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50977">
        <property type="entry name" value="HTH_TETR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH tetR-type" evidence="2">
        <location>
            <begin position="15"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="1">
        <location>
            <begin position="38"/>
            <end position="57"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ72611.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="220" mass="24008" checksum="4B2C12C4E2ABEB5B" modified="2015-12-09" version="1">MASGDVGVTRGRPRKTETQDALHGIMRAFWQNGYKATSMNDLVGASGMAKPSLYAAFGDKEAMFEKSLLHYFDCYGDMVFGPLAAAEHHYLLDFQELIRTVGYLAADESTPMGCFLFNSQVEVAYGSERHKALLADLGQARFNAIKTRVLKAIDAGQVPEEQDPDTLATFIDGQLAAVSILARSGGTKTQIDTFVETAMRALPSYGSVDLETTDSFTLRQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADD7</accession>
    <name>A0A0M7ADD7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Ribosomal-protein-alanine acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03256</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72647.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72647">
        <property type="protein sequence ID" value="CTQ72647"/>
        <property type="gene ID" value="LAX5112_03256"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="1"/>
            <end position="144"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72647.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="155" mass="17108" checksum="67F29478BC639A44" modified="2015-12-09" version="1">MEISASKVFLTIEGLETFADDSCATDEQHLSAIEPGTSWTAETDDGQQVGFLAAIPEDTALHIYEISVHSDHQKLGVGKALMEHAEAHARVLGLSEMTLTTFRHVPWNAPFYERLGFQILKPKECDGRLGSILAEELGRGLPMPEQRCAMRKTLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADY2</accession>
    <name>A0A0M7ADY2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Electron transfer DM13</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03323</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72831.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672741.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72831">
        <property type="protein sequence ID" value="CTQ72831"/>
        <property type="gene ID" value="LAX5112_03323"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019545">
        <property type="entry name" value="DM13_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10517">
        <property type="entry name" value="DM13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51549">
        <property type="entry name" value="DM13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DM13" evidence="1">
        <location>
            <begin position="51"/>
            <end position="156"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51549"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72831.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="156" mass="16976" checksum="EF4FF178236723F1" modified="2015-12-09" version="1">MIRWLVLLVSHGGMLAIGFALGVYFLPILTAPKGPDAAVLAEASQSAEYQAALTRDLKGSDFLHWGEGSISLSQDKIVHTGALSPGPDYKLYLVKEFVEDEAGFEAVRESAVQIADINTFEGFIADVPDGVNIEDYTTVLVWCEAFSEFITAAKYR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AE14</accession>
    <name>A0A0M7AE14_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Oligopeptide transport system permease protein OppB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">oppB</name>
        <name evidence="8" type="ORF">LAX5112_03336</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="6">Cell membrane</location>
            <topology evidence="6">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72857.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672752.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03336"/>
    <dbReference type="EnsemblBacteria" id="CTQ72857">
        <property type="protein sequence ID" value="CTQ72857"/>
        <property type="gene ID" value="LAX5112_03336"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045621">
        <property type="entry name" value="BPD_transp_1_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19300">
        <property type="entry name" value="BPD_transp_1_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="9"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="96"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="133"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="175"/>
            <end position="193"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="214"/>
            <end position="233"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="239"/>
            <end position="260"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="272"/>
            <end position="300"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="7">
        <location>
            <begin position="94"/>
            <end position="297"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ72857.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="307" mass="33359" checksum="DCAC5950D3512CA4" modified="2015-12-09" version="1">MTRYVFGRLLGAIPTIFLIVTISFFLIRIAPGGPFDLERPLEAKVMENLNKIYHLDEPLWTQYLLYLKSISQLDFGPSFYFRDFTINELFAASLPISIQLGLSALALALVVGGFMGVVAALRQNGPADYSVMAAATLGVTIPNFVVAPVLTLLLGVWLGWLPVGGWGDGAFVNKILPVVTLALPQIAVIARLTRGSMIEALRSNHVRTARAYGLTNYLVIVVHTLRGAILPVVSYMGPAAAALLTGSVVVETIFGIPGIGRYFVQGALNRDYTLVMGTVVVVACFVIIFNLVVDLLYALLDPRVRYD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AF17</accession>
    <name>A0A0M7AF17_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Putative CtpA-like serine protease</fullName>
            <ecNumber evidence="6">3.4.21.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">LAX5112_03621</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the peptidase S41A family.</text>
    </comment>
    <dbReference type="EC" id="3.4.21.-" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73678.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451378.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03621"/>
    <dbReference type="EnsemblBacteria" id="CTQ73678">
        <property type="protein sequence ID" value="CTQ73678"/>
        <property type="gene ID" value="LAX5112_03621"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008236">
        <property type="term" value="F:serine-type peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd07560">
        <property type="entry name" value="Peptidase_S41_CPP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.42.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029045">
        <property type="entry name" value="ClpP/crotonase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001478">
        <property type="entry name" value="PDZ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036034">
        <property type="entry name" value="PDZ_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004447">
        <property type="entry name" value="Peptidase_S41A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005151">
        <property type="entry name" value="Tail-specific_protease"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13180">
        <property type="entry name" value="PDZ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03572">
        <property type="entry name" value="Peptidase_S41"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00228">
        <property type="entry name" value="PDZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00245">
        <property type="entry name" value="TSPc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50156">
        <property type="entry name" value="SSF50156"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52096">
        <property type="entry name" value="SSF52096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00225">
        <property type="entry name" value="prc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50106">
        <property type="entry name" value="PDZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3 6" id="KW-0645">Protease</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0720">Serine protease</keyword>
    <feature type="domain" description="PDZ" evidence="5">
        <location>
            <begin position="91"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="389"/>
            <end position="412"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009179"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU004404"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50106"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ73678.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="443" mass="47622" checksum="BF120262AFFB184A" modified="2015-12-09" version="1">MIRKASLLLAGALLGAAAVTTLSQMPFHVSGAANAAATDTYRQLNLFGDVFERVRSDYVEVPDDAQLIESAINGMLTSLDPHSSYMSPKSFRDMQVQTRGEFGGLGIEVTMEDGLVKVVSPIDETPAAKAGVLAGDLITYIDGEQVQGLTLNEAVEKMRGPVNTDIVVTIRREGQTQPLDITITRDIIRIRSVRWREEDDVGYVRVTQFNEQTFDGLKKGLEETAKNIGEENLKGFVIDLRNNPGGLLDQAIAVSDAFLDRGEIVSTRGREADETQRYNARAGDITEGKPVIVLVNGGSASASEIVAGALQDHRRATILGTRSFGKGSVQTIIPLGANGAIRLTTARYYTPSGNSIQAKGIVPDIEALQELPEELVGRVETRGEAGLRGHLEAEGEEQSGSQAYIPPDPEDDTQLNLALDLLRGVQVNSAFPPIADTASVPKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AF71</accession>
    <name>A0A0M7AF71_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Lipopolysaccharide-assembly, LptC-related</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">LAX5112_03639</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73728.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03639"/>
    <dbReference type="EnsemblBacteria" id="CTQ73728">
        <property type="protein sequence ID" value="CTQ73728"/>
        <property type="gene ID" value="LAX5112_03639"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015221">
        <property type="term" value="F:lipopolysaccharide transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010664">
        <property type="entry name" value="LipoPS_assembly_LptC-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026265">
        <property type="entry name" value="LptC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06835">
        <property type="entry name" value="LptC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR04409">
        <property type="entry name" value="LptC_YrbK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="1" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="36"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022519"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ73728.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="218" mass="23933" checksum="480799CD3BC5F329" modified="2015-12-09" version="1">MSAVSQQFGGLRPRDMESRVQRSARRHSTLVRVLRFLFPAIGLLILAGMIGAVVLFNVLGSFGAANLVLTSDGIVMDHPKLSGNDGERSYQVTARKAIQRLTDPRIIDLEEIRADIVLAPDEGARIISLKGIYNNAAETLRLYEGVQLNWSEGYTVDVETVDVDLKTGAISSDDPITIGSGEAQLTAGKIDYDKDKQIVWFKEGVKLILYPATEDENQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFB2</accession>
    <name>A0A0M7AFB2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Bacterial aa3 type cytochrome c oxidase subunit IV</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03144</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72334.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008190938.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03144"/>
    <dbReference type="EnsemblBacteria" id="CTQ72334">
        <property type="protein sequence ID" value="CTQ72334"/>
        <property type="gene ID" value="LAX5112_03144"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.160">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036596">
        <property type="entry name" value="Cyt-C_aa3_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012422">
        <property type="entry name" value="Cyt_c_oxidase_su4_bac-aa3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07835">
        <property type="entry name" value="COX4_pro_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81469">
        <property type="entry name" value="SSF81469"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="51"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="75"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="domain" description="COX4_pro_2" evidence="2">
        <location>
            <begin position="4"/>
            <end position="42"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07835"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ72334.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="93" mass="9815" checksum="E3544421C8BAA7B2" modified="2015-12-09" version="1">MSDETAPAMDYETHESTYEGFINFSKIGTVAVLNIVLCLILFAFGGTSAVVFGWLMLIATLVASGIGMALGEKGWVPPTVVFALTGVLCILLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFQ0</accession>
    <name>A0A0M7AFQ0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Copper export regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">hmrR_1</name>
        <name evidence="5" type="ORF">LAX5112_03636</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73719.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672982.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03636"/>
    <dbReference type="EnsemblBacteria" id="CTQ73719">
        <property type="protein sequence ID" value="CTQ73719"/>
        <property type="gene ID" value="LAX5112_03636"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005507">
        <property type="term" value="F:copper ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045893">
        <property type="term" value="P:positive regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01108">
        <property type="entry name" value="HTH_CueR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011789">
        <property type="entry name" value="CueR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009061">
        <property type="entry name" value="DNA-bd_dom_put_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000551">
        <property type="entry name" value="MerR-type_HTH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015358">
        <property type="entry name" value="Tscrpt_reg_MerR_DNA-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00376">
        <property type="entry name" value="MerR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09278">
        <property type="entry name" value="MerR-DNA-bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00040">
        <property type="entry name" value="HTHMERR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00422">
        <property type="entry name" value="HTH_MERR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46955">
        <property type="entry name" value="SSF46955"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02044">
        <property type="entry name" value="CueR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50937">
        <property type="entry name" value="HTH_MERR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH merR-type" evidence="4">
        <location>
            <begin position="1"/>
            <end position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50937"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ73719.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="132" mass="14743" checksum="A2C97083E00EC1B4" modified="2015-12-09" version="1">MNIGDAAKQCGLPTKTIRYYEDIKLVAPMRSENGYRDYSETDVQRLAFIQRSRGLGFTIDQCRELLSLYDDRNRASADVKAIARLKIDEIDAKINELKSLKKTLKSLVASCQGDDRPDCPIIDDLAGVISTG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFW3</accession>
    <name>A0A0M7AFW3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03506</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73332.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672881.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ73332">
        <property type="protein sequence ID" value="CTQ73332"/>
        <property type="gene ID" value="LAX5112_03506"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ73332.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="185" mass="21153" checksum="61674BECA1B3B0C0" modified="2015-12-09" version="1">MVSRDVFIDQPQAFDGPVVEAASFLGRVQRYLDMAQFRDVAVDLADGRLFILSESRFEDLIVYGQHPLAWLIDISSYPTHSTRFGTSIEDLENLISHWCGSIIDQTGRPHIVLDAWMYDQFRQKQTIMLASAQKSAPKAWSGVDRSQQVPKLDRTSTLICLETFRKTGLRRPPTLPRDDPRFELP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGQ4</accession>
    <name>A0A0M7AGQ4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03825</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74288.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673145.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74288">
        <property type="protein sequence ID" value="CTQ74288"/>
        <property type="gene ID" value="LAX5112_03825"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021529">
        <property type="entry name" value="DUF2798"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11391">
        <property type="entry name" value="DUF2798"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="40"/>
            <end position="63"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74288.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="76" mass="8456" checksum="533F7109A8C8F524" modified="2015-12-09" version="1">MHPKFAPYLFGAMLSGSMSFLVSGIATFRAVGPHAEFFSFWIESWLFAWAVAFPAVLVLAPIVRKIVAKLVKQPEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHN7</accession>
    <name>A0A0M7AHN7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Putative pyruvate, phosphate dikinase regulatory protein</fullName>
            <shortName evidence="5">PPDK regulatory protein</shortName>
            <ecNumber evidence="5">2.7.11.32</ecNumber>
            <ecNumber evidence="5">2.7.4.27</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">yqfL</name>
        <name evidence="6" type="ORF">LAX5112_03779</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation/dephosphorylation.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>ADP + N(tele)-phospho-L-histidyl/L-threonyl-[pyruvate, phosphate dikinase] = AMP + H(+) + N(tele)-phospho-L-histidyl/O-phospho-L-threonyl-[pyruvate, phosphate dikinase]</text>
            <dbReference type="Rhea" id="RHEA:43692"/>
            <dbReference type="Rhea" id="RHEA-COMP:10650"/>
            <dbReference type="Rhea" id="RHEA-COMP:10651"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:83586"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.11.32"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>H(+) + N(tele)-phospho-L-histidyl/O-phospho-L-threonyl-[pyruvate, phosphate dikinase] + phosphate = diphosphate + N(tele)-phospho-L-histidyl/L-threonyl-[pyruvate, phosphate dikinase]</text>
            <dbReference type="Rhea" id="RHEA:43696"/>
            <dbReference type="Rhea" id="RHEA-COMP:10650"/>
            <dbReference type="Rhea" id="RHEA-COMP:10651"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:61977"/>
            <dbReference type="ChEBI" id="CHEBI:83586"/>
            <dbReference type="EC" id="2.7.4.27"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the pyruvate, phosphate/water dikinase regulatory protein family. PDRP subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.7.11.32" evidence="5"/>
    <dbReference type="EC" id="2.7.4.27" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74157.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03779"/>
    <dbReference type="EnsemblBacteria" id="CTQ74157">
        <property type="protein sequence ID" value="CTQ74157"/>
        <property type="gene ID" value="LAX5112_03779"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043531">
        <property type="term" value="F:ADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016776">
        <property type="term" value="F:phosphotransferase activity, phosphate group as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006470">
        <property type="term" value="P:protein dephosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006468">
        <property type="term" value="P:protein phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00921">
        <property type="entry name" value="PDRP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005177">
        <property type="entry name" value="Kinase-pyrophosphorylase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026565">
        <property type="entry name" value="PPDK_reg"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31756">
        <property type="entry name" value="PTHR31756"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03618">
        <property type="entry name" value="Kinase-PPPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5 6" id="KW-0418">Kinase</keyword>
    <keyword evidence="3 5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 5" id="KW-0723">Serine/threonine-protein kinase</keyword>
    <keyword evidence="2 5 6" id="KW-0808">Transferase</keyword>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="153"/>
            <end position="160"/>
        </location>
        <ligand>
            <name>ADP</name>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00921"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ74157.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="282" mass="32312" checksum="141E2C95FC1ADF08" modified="2015-12-09" version="1">MNKTRHYFHLHLVSDSTGETLMTVARAATVQYENVQEIEHVYPLVRSQKQLDRVISEIEKAPGIVLYTLVDEEIAQRLEQKCRELGTPFVNILDPVFAVFQSYLNVTQTHRIGGQHEMDAEYFSRMEALNYTMMHDDGQIWDDLESADIVLLGISRTSKTPTCIYLANRGIKAANVPLVPDISLPESVKSLKNPMVVGLIASAERIQQIRRNRVLSLNSEGYNDQYVDRKEISREINMTRRLCSEHNWPLIDVTRRSIEETAAEILTLFKDYKTARENGVSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHR6</accession>
    <name>A0A0M7AHR6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">(3S)-malyl-CoA thioesterase</fullName>
            <ecNumber evidence="7">3.1.2.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">mcl2</name>
        <name evidence="7" type="ORF">LAX5112_03707</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the HpcH/HpaI aldolase family.</text>
    </comment>
    <dbReference type="EC" id="3.1.2.-" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ73956.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673045.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03707"/>
    <dbReference type="EnsemblBacteria" id="CTQ73956">
        <property type="protein sequence ID" value="CTQ73956"/>
        <property type="gene ID" value="LAX5112_03707"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005000">
        <property type="entry name" value="Aldolase/citrate-lyase_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011206">
        <property type="entry name" value="Citrate_lyase_beta/mcl1/mcl2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015813">
        <property type="entry name" value="Pyrv/PenolPyrv_Kinase-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040442">
        <property type="entry name" value="Pyrv_Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03328">
        <property type="entry name" value="HpcH_HpaI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF015582">
        <property type="entry name" value="Cit_lyase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51621">
        <property type="entry name" value="SSF51621"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-0460">Magnesium</keyword>
    <keyword evidence="3 5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HpcH_HpaI" evidence="6">
        <location>
            <begin position="9"/>
            <end position="227"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="70"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4 5">
        <location>
            <position position="128"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="159"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005568"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR015582-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR015582-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF03328"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ73956.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="294" mass="31450" checksum="950FC9CD52E35331" modified="2015-12-09" version="1">MSETFKPRRSALYMPGSNARALEKAKTLDVDCLLLDLEDAVAPDAKETARQQIVTAVSEGGYGEREVVIRINGLDTVWGDDDLKAAVKANPDAILVPKVNGPADLQKVAHLLSMHGASSSIQLWAMMETPEAMLNAGAIGACGRDPEVRLSCFVMGTNDLAKETRARLVPGRAVMMPWLMTCVAAARAGGIDILDGVYNAFQDEEGFGAECAQGAEMGMDGKTLIHPKQIGSCHAAFSPTEDEVTWARKINEIFDLPENASKGAIQVDGKMVERLHADMGKRVIAIADAIAARS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AI27</accession>
    <name>A0A0M7AI27_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">NADH-quinone oxidoreductase subunit J</fullName>
            <ecNumber evidence="1">7.1.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">nuoJ</name>
        <name evidence="2" type="ORF">LAX5112_03480</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>a quinone + 5 H(+)(in) + NADH = a quinol + 4 H(+)(out) + NAD(+)</text>
            <dbReference type="Rhea" id="RHEA:57888"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:24646"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:132124"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the complex I subunit 6 family.</text>
    </comment>
    <dbReference type="EC" id="7.1.1.-" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73264.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008191591.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03480"/>
    <dbReference type="EnsemblBacteria" id="CTQ73264">
        <property type="protein sequence ID" value="CTQ73264"/>
        <property type="gene ID" value="LAX5112_03480"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008137">
        <property type="term" value="F:NADH dehydrogenase (ubiquinone) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048038">
        <property type="term" value="F:quinone binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.1200">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001457">
        <property type="entry name" value="NADH_UbQ/plastoQ_OxRdtase_su6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042106">
        <property type="entry name" value="Nuo/plastoQ_OxRdtase_6_NuoJ"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00499">
        <property type="entry name" value="Oxidored_q3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="1" id="KW-0520">NAD</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="1" id="KW-0874">Quinone</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="32"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="55"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="91"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="147"/>
            <end position="170"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73264.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="204" mass="22251" checksum="1311ABE4B16659BA" modified="2015-12-09" version="1">MILKALFFYLFAGVTVASAFMVIAARNPVTSVLFLILAFVNSAGLFILLGAEYLALLLVVVYVGAVAVLFLFVVMMLDVDFVELRQGFLQYLPVGGLVGLILLVELLMGFGAWVILPELTANTVEPTPPLTEMTNIEALGSVLYTKYIYFFQVAGLILLVAMIGAIVLTLRHKPNVKRQDIPTQVGRTREAAVEVRKVETGKGI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIA1</accession>
    <name>A0A0M7AIA1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">N-acetyltransferase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03775</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74146.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673094.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03775"/>
    <dbReference type="EnsemblBacteria" id="CTQ74146">
        <property type="protein sequence ID" value="CTQ74146"/>
        <property type="gene ID" value="LAX5112_03775"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13302">
        <property type="entry name" value="Acetyltransf_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="11"/>
            <end position="153"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13302"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74146.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="190" mass="21678" checksum="BD516222F1B044CA" modified="2015-12-09" version="1">MTQDILLETERLICRSWQDADLEPFAQMCADPEVMRYFPGPLTYDQTTALIDKAKAKQEQDGFCFVPVETKETSEFLGFVGLSIPAYPKPLPFDPCVEIGWRLKRSAWGKGYASEAALAWIRFGFETIGLKEIVSFTADNNTPSQKVMARIGMSRDPADDFLHPMLPETHALALHVLYRLDRKTWARRQM</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIA7</accession>
    <name>A0A0M7AIA7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Non-heme chloroperoxidase</fullName>
            <ecNumber evidence="2">1.11.1.10</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">cpo</name>
        <name evidence="2" type="ORF">LAX5112_04017</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.11.1.10" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74875.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673317.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04017"/>
    <dbReference type="EnsemblBacteria" id="CTQ74875">
        <property type="protein sequence ID" value="CTQ74875"/>
        <property type="gene ID" value="LAX5112_04017"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016691">
        <property type="term" value="F:chloride peroxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000073">
        <property type="entry name" value="AB_hydrolase_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000639">
        <property type="entry name" value="Epox_hydrolase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00561">
        <property type="entry name" value="Abhydrolase_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00111">
        <property type="entry name" value="ABHYDROLASE"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00412">
        <property type="entry name" value="EPOXHYDRLASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-0575">Peroxidase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AB hydrolase-1" evidence="1">
        <location>
            <begin position="24"/>
            <end position="260"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00561"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74875.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="276" mass="30200" checksum="1D055CF97209C764" modified="2015-12-09" version="1">MATFKTTDGTEIFYKDWGSTDAQPIVFHHGWPLSGDDWDNQMLFFLSKGYRVIAHDRRGHGRSEQTDKGHNMDTYAADVAELVRHLDLKNAVHIGHSTGGGEAARYVARAEPGRVAKAALLGAITPLMLKTETNPDGIPLEVFDGLRAALASNRAQFFLDVPSGPFYGFNRDGAQVSEGLIQNWWRQGMMGSASAHYQCIAVFSETDQTEDLKAIDVPVLVLHGDDDQVVPIANSADKAIKLLKNGTQKTYAGLSHGFFATHPDEVNADLLAFIES</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIK0</accession>
    <name>A0A0M7AIK0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03740</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74050.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673067.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74050">
        <property type="protein sequence ID" value="CTQ74050"/>
        <property type="gene ID" value="LAX5112_03740"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="49"/>
            <end position="98"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74050.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="98" mass="10360" checksum="E208771787F6EEA0" modified="2015-12-09" version="1">MIEPRSTATIRALASLAELSADQLEEGTSVEDVIATLRKAAEAVRMVIDETETEDGAPEEADLAQDLTPMDLSGDDAAELSDDDSETKSSEIHVLNAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AK58</accession>
    <name>A0A0M7AK58_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Dihydropteroate synthase</fullName>
            <ecNumber evidence="2">2.5.1.15</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">folP_2</name>
        <name evidence="2" type="ORF">LAX5112_04279</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.5.1.15" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000022">
        <property type="protein sequence ID" value="CTQ75545.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673514.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000022.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04279"/>
    <dbReference type="EnsemblBacteria" id="CTQ75545">
        <property type="protein sequence ID" value="CTQ75545"/>
        <property type="gene ID" value="LAX5112_04279"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004156">
        <property type="term" value="F:dihydropteroate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009396">
        <property type="term" value="P:folic acid-containing compound biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045031">
        <property type="entry name" value="DHP_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011005">
        <property type="entry name" value="Dihydropteroate_synth-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000489">
        <property type="entry name" value="Pterin-binding_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20941">
        <property type="entry name" value="PTHR20941"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00809">
        <property type="entry name" value="Pterin_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51717">
        <property type="entry name" value="SSF51717"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50972">
        <property type="entry name" value="PTERIN_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Pterin-binding" evidence="1">
        <location>
            <begin position="38"/>
            <end position="294"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50972"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75545.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="294" mass="32792" checksum="45659E45C0C73583" modified="2015-12-09" version="1">MISADRVLPLWLKYREALETPIRTFDFPKFGKKFEDRTYQMGVLNLSPDSSYRETVCHTLQAALYRGRRMTLEGAAMVDIGGESTGDTADIVSIERQIDRMRPAVSALADENILVSVETYHPEVAVALLEAGAGVVNLTGRVDDKSFYQAIAKHEAGLILCYTPGENARSSDDLPPVDQVFDAQLLFFKDRVAMAEDAGIERLWVDPGFGFALNLPDGPDRIRYQTDSILQSFRLRELGWPVTVQLTGHVFLFRDEVRVAQTSAATLAVLSKANMVRSHEVPRVQPVLNLQDYA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALY8</accession>
    <name>A0A0M7ALY8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04402</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75899.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673615.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000023.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75899">
        <property type="protein sequence ID" value="CTQ75899"/>
        <property type="gene ID" value="LAX5112_04402"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ75899.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="115" mass="12549" checksum="8E8324691AB21772" modified="2015-12-09" version="1">MDSVKKCLASLSAQVRFYNSAKATMRAIAVRRKDGGDDYVSGLDLEALRLPLPNLEQDFVIYGKPDALRAVATALHSRGWPSNGPAPLTELAQELAEAALKDWKDPDRCPMQPPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AM14</accession>
    <name>A0A0M7AM14_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 10">Adenine phosphoribosyltransferase</fullName>
            <shortName evidence="10">APRT</shortName>
            <ecNumber evidence="5 10">2.4.2.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10 12" type="primary">apt</name>
        <name evidence="12" type="ORF">LAX5112_04168</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 10">
            <text>AMP + diphosphate = 5-phospho-alpha-D-ribose 1-diphosphate + adenine</text>
            <dbReference type="Rhea" id="RHEA:16609"/>
            <dbReference type="ChEBI" id="CHEBI:16708"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:58017"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="2.4.2.7"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3 10">Purine metabolism; AMP biosynthesis via salvage pathway; AMP from adenine: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="10">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 10">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 10">Belongs to the purine/pyrimidine phosphoribosyltransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.4.2.7" evidence="5 10"/>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75270.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008190496.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04168"/>
    <dbReference type="EnsemblBacteria" id="CTQ75270">
        <property type="protein sequence ID" value="CTQ75270"/>
        <property type="gene ID" value="LAX5112_04168"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00588">
        <property type="reaction ID" value="UER00646"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003999">
        <property type="term" value="F:adenine phosphoribosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006168">
        <property type="term" value="P:adenine salvage"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044209">
        <property type="term" value="P:AMP salvage"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006166">
        <property type="term" value="P:purine ribonucleoside salvage"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06223">
        <property type="entry name" value="PRTases_typeI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2020">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00004">
        <property type="entry name" value="Aden_phosphoribosyltr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005764">
        <property type="entry name" value="Ade_phspho_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000836">
        <property type="entry name" value="PRibTrfase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029057">
        <property type="entry name" value="PRTase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00156">
        <property type="entry name" value="Pribosyltran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53271">
        <property type="entry name" value="SSF53271"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01090">
        <property type="entry name" value="apt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 10" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7 10 12" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="9 10" id="KW-0660">Purine salvage</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 10 12" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Pribosyltran" evidence="11">
        <location>
            <begin position="50"/>
            <end position="156"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000868"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004659"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00008391"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00011893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022726"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF00156"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ75270.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="182" mass="19820" checksum="3FA0CE35D05EF8AD" modified="2015-12-09" version="1">MTDQTIRDELISAVRTIKDYPKEGILFRDITTLLGNARAFRRAVDALVQPWAGSKVDQIAGIEARGFILGGAVAHQLSAGFVPIRKKGKLPHETVRIAYSLEYGLDEMEMHKDAIQPGDRVILVDDLIATGGTAEAACKLLRSMGANIEAACFIVDLPDLGGRKKLEELSVPVRTLVEFPGH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AM63</accession>
    <name>A0A0M7AM63_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">SnoaL-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_04271</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75516.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673498.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000021.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04271"/>
    <dbReference type="EnsemblBacteria" id="CTQ75516">
        <property type="protein sequence ID" value="CTQ75516"/>
        <property type="gene ID" value="LAX5112_04271"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032710">
        <property type="entry name" value="NTF2-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037401">
        <property type="entry name" value="SnoaL-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13577">
        <property type="entry name" value="SnoaL_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54427">
        <property type="entry name" value="SSF54427"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809759" description="SnoaL-like domain-containing protein" evidence="1">
        <location>
            <begin position="21"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="domain" description="SnoaL-like" evidence="2">
        <location>
            <begin position="32"/>
            <end position="151"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13577"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ75516.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="176" mass="19037" checksum="F63FBC198AF975FD" modified="2015-12-09" version="1">MKPTLPAVAVLSALATSAVANSKLPPAGEPQEAAIRTLVSSIPLAVDRAAYDLAEAAFAPEFVIDYTSLWGGEPATMTPSALMDAWRGIVPGFDVTWHELGPVSVTVSGDTASATAFVDGRHWIDGELWRPVGNYYWDLQRIEGNWLVTRMEFDMTEEIGDRALTAIAMERAASRN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANC9</accession>
    <name>A0A0M7ANC9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04659</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000028">
        <property type="protein sequence ID" value="CTQ76648.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76648">
        <property type="protein sequence ID" value="CTQ76648"/>
        <property type="gene ID" value="LAX5112_04659"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="36"/>
            <end position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76648.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="62" mass="6886" checksum="A7B5C9D6FBB74CA7" modified="2015-12-09" version="1">MKLNDIIITLIMFLALLGMAVFLFNIPIGIDTRTFGAWTFGAILVFGIINIAMVVIDSIKRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AND6</accession>
    <name>A0A0M7AND6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Acyl-CoA dehydrogenase</fullName>
            <ecNumber evidence="10">1.3.99.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">mmgC_6</name>
        <name evidence="10" type="ORF">LAX5112_04445</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 5">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the acyl-CoA dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.3.99.-" evidence="10"/>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ76041.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04445"/>
    <dbReference type="EnsemblBacteria" id="CTQ76041">
        <property type="protein sequence ID" value="CTQ76041"/>
        <property type="gene ID" value="LAX5112_04445"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016627">
        <property type="term" value="F:oxidoreductase activity, acting on the CH-CH group of donors"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.540.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006091">
        <property type="entry name" value="Acyl-CoA_Oxase/DH_mid-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046373">
        <property type="entry name" value="Acyl-CoA_Oxase/DH_mid-dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036250">
        <property type="entry name" value="AcylCo_DH-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009075">
        <property type="entry name" value="AcylCo_DH/oxidase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013786">
        <property type="entry name" value="AcylCoA_DH/ox_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037069">
        <property type="entry name" value="AcylCoA_DH/ox_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009100">
        <property type="entry name" value="AcylCoA_DH/oxidase_NM_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00441">
        <property type="entry name" value="Acyl-CoA_dh_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02770">
        <property type="entry name" value="Acyl-CoA_dh_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02771">
        <property type="entry name" value="Acyl-CoA_dh_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47203">
        <property type="entry name" value="SSF47203"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56645">
        <property type="entry name" value="SSF56645"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0274">FAD</keyword>
    <keyword evidence="3 5" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="5 10" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Acyl-CoA_dh_N" evidence="9">
        <location>
            <begin position="41"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="domain" description="Acyl-CoA_dh_M" evidence="8">
        <location>
            <begin position="158"/>
            <end position="253"/>
        </location>
    </feature>
    <feature type="domain" description="Acyl-CoA_dh_1" evidence="7">
        <location>
            <begin position="265"/>
            <end position="412"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="10"/>
            <end position="24"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009347"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU362125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00441"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF02770"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF02771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ76041.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="423" mass="45849" checksum="49D1952EB071CA6E" modified="2015-12-09" version="1">MGSHAGFSGKSGQLIPNLTPKQDSRRFSGKVKASQMDFTLSEEQTALQETVRRFAQSELPDIAREVEEKDEAPGPDVMHRFAELGLLGVNLPEAYGGGGMSHFEAVLVLEEVAKVSIGVAFPIFESCFGPALAIANFAPEAMRQKILPKVCSGDMIVAVSMSEPGAGSALTDLTTKARVEGDRVIVNGQKRWCSGAGHSDAYVVYCRMSDDPGAKGIGAVLVEKGADGFTFGKREHHMGFRGVQSADMYFDDVSVPAENIIVPAGGFRKLMEAFDLERCGNTTMSLACAQSAFDYVLNYVQEREQFGKPIIDFQAVQLQIADMKMKLDAARLLLYRAVVNAESGLPSVGESSIAKCFANEMTREVTGTAMQLMGGYGYSREYPMEQKMRDSWGWGIAGGSIDIQKTNIASAVVGRRFNQRAKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AP59</accession>
    <name>A0A0M7AP59_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Phosphodiesterase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_04517</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the metallophosphoesterase superfamily. YfcE family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000025">
        <property type="protein sequence ID" value="CTQ76206.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04517"/>
    <dbReference type="EnsemblBacteria" id="CTQ76206">
        <property type="protein sequence ID" value="CTQ76206"/>
        <property type="gene ID" value="LAX5112_04517"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.21.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024654">
        <property type="entry name" value="Calcineurin-like_PHP_lpxH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029052">
        <property type="entry name" value="Metallo-depent_PP-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011152">
        <property type="entry name" value="Pesterase_MJ0912"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12850">
        <property type="entry name" value="Metallophos_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000883">
        <property type="entry name" value="Pesterase_MJ0912"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56300">
        <property type="entry name" value="SSF56300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Metallophos_2" evidence="2">
        <location>
            <begin position="6"/>
            <end position="188"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008950"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF12850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ76206.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="254" mass="28132" checksum="2010B770F6DEAF20" modified="2015-12-09" version="1">MGQSFMKIAVVSDIHGNVLALEAVLADLTGEAPDVVVNLGDCVSGPLWPEETAAILRETSWPTVRGNHDRIVLENPIEKMGPTDAFAAERLSRQSRDWLKTTQPTIRLSDDVFLCHGTPDNDDRYLTEKVEGPKGHLPDEETLIAELKGETSPILCCGHTHIPRVIHLHETGQTIVNPGSVGLPSYEDDHPNRHTMEVGSPHARYALMTKSISGWSFQEKILPYDWEAAALEAEKNKRPGWGRSLRRGFYGPLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQR7</accession>
    <name>A0A0M7AQR7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04648</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000027">
        <property type="protein sequence ID" value="CTQ76600.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76600">
        <property type="protein sequence ID" value="CTQ76600"/>
        <property type="gene ID" value="LAX5112_04648"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ76600.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="45" mass="4835" checksum="E08B2C18EC5DFD1B" modified="2015-12-09" version="1">MPKDPIKIEFTEVWQSELAALGKTISLECNSVGTLISDAVTDGIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARJ6</accession>
    <name>A0A0M7ARJ6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Peptidoglycan glycosyltransferase</fullName>
            <ecNumber evidence="4">2.4.1.129</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="primary">pbpG_2</name>
        <name evidence="15" type="ORF">LAX5112_04813</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>[GlcNAc-(1-&gt;4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)](n)-di-trans,octa-cis-undecaprenyl diphosphate + beta-D-GlcNAc-(1-&gt;4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)-di-trans,octa-cis-undecaprenyl diphosphate = [GlcNAc-(1-&gt;4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)](n+1)-di-trans-octa-cis-undecaprenyl diphosphate + di-trans,octa-cis-undecaprenyl diphosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:23708"/>
            <dbReference type="Rhea" id="RHEA-COMP:9602"/>
            <dbReference type="Rhea" id="RHEA-COMP:9603"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:58405"/>
            <dbReference type="ChEBI" id="CHEBI:60033"/>
            <dbReference type="ChEBI" id="CHEBI:78435"/>
            <dbReference type="EC" id="2.4.1.129"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1">Cell wall biogenesis; peptidoglycan biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">In the C-terminal section; belongs to the transpeptidase family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">In the N-terminal section; belongs to the glycosyltransferase 51 family.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.129" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000031">
        <property type="protein sequence ID" value="CTQ77131.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673978.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000031.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04813"/>
    <dbReference type="EnsemblBacteria" id="CTQ77131">
        <property type="protein sequence ID" value="CTQ77131"/>
        <property type="gene ID" value="LAX5112_04813"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00219"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004180">
        <property type="term" value="F:carboxypeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008658">
        <property type="term" value="F:penicillin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008955">
        <property type="term" value="F:peptidoglycan glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3810.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.710.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012338">
        <property type="entry name" value="Beta-lactam/transpept-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001264">
        <property type="entry name" value="Glyco_trans_51"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023346">
        <property type="entry name" value="Lysozyme-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036950">
        <property type="entry name" value="PBP_transglycosylase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001460">
        <property type="entry name" value="PCN-bd_Tpept"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00912">
        <property type="entry name" value="Transgly"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00905">
        <property type="entry name" value="Transpeptidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53955">
        <property type="entry name" value="SSF53955"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56601">
        <property type="entry name" value="SSF56601"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0121">Carboxypeptidase</keyword>
    <keyword evidence="7" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="12" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-0511">Multifunctional enzyme</keyword>
    <keyword evidence="6" id="KW-0645">Protease</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0808">Transferase</keyword>
    <keyword evidence="12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="12" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="117"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="domain" description="Transgly" evidence="14">
        <location>
            <begin position="165"/>
            <end position="340"/>
        </location>
    </feature>
    <feature type="domain" description="Transpeptidase" evidence="13">
        <location>
            <begin position="425"/>
            <end position="691"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="1"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="696"/>
            <end position="758"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="11">
        <location>
            <begin position="51"/>
            <end position="86"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004752"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007739"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022645"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023268"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023988"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF00905"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF00912"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="CTQ77131.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="758" mass="80919" checksum="BE0B5789BEDA22A1" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARZ5</accession>
    <name>A0A0M7ARZ5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Neu5Ac permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">siaT_28</name>
        <name evidence="5" type="ORF">LAX5112_05006</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000039">
        <property type="protein sequence ID" value="CTQ77669.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674129.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000039.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_05006"/>
    <dbReference type="EnsemblBacteria" id="CTQ77669">
        <property type="protein sequence ID" value="CTQ77669"/>
        <property type="gene ID" value="LAX5112_05006"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010656">
        <property type="entry name" value="DctM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004681">
        <property type="entry name" value="TRAP_DctM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33362">
        <property type="entry name" value="PTHR33362"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06808">
        <property type="entry name" value="DctM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006066">
        <property type="entry name" value="HI0050"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="7"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="53"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="85"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="139"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="174"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="217"/>
            <end position="237"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="244"/>
            <end position="262"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="306"/>
            <end position="326"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="338"/>
            <end position="357"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="363"/>
            <end position="380"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="387"/>
            <end position="407"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="427"/>
            <end position="449"/>
        </location>
    </feature>
    <feature type="domain" description="DctM" evidence="4">
        <location>
            <begin position="5"/>
            <end position="443"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF06808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ77669.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="452" mass="48312" checksum="A40134A6DAEB0FEE" modified="2015-12-09" version="1">MTDGTLVTLISVGVTILFMLGVPVFLVIAYWVVGCSFVLGLTLDNMGAEILNVFNKGFALLAMPLFILTGDLINKSGIARRLSDFAYACLGWLRGGLAMASLGACGLFAAISGSNSATTATIGSMLHPEMVKGGYDERFSAATAAAGGTVGIIIPPSIIFIVYGFLMNLPISDLFVAGIVPGALMVIGMQFACWIICRINGWGFLIPLQLNRVLKTAFGAWLGFFAIGLVLWGIYTGKFSPTEAAGVTVGFCIIAGLLSWHVSRLTRQNRDRTWQEKNYAEMLVVEGFTLWQVPGITMRSAEITGILAPLIAISVVMQQILSLLGAQQVIGDFVTSMGGYYAVLFTAMIIVFFSGMVLESLPVTIILAPILAPIAASVGVDPIHFSVIFLVGASIGFITPPYGLNLYVASGVTGVPYFRLLRYTVPYLVALIGVWIFVSLTPEVALFLLPDR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AS63</accession>
    <name>A0A0M7AS63_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Trehalose transport system permease protein SugA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">sugA_2</name>
        <name evidence="7" type="ORF">LAX5112_04587</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000026">
        <property type="protein sequence ID" value="CTQ76414.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040450931.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000026.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04587"/>
    <dbReference type="EnsemblBacteria" id="CTQ76414">
        <property type="protein sequence ID" value="CTQ76414"/>
        <property type="gene ID" value="LAX5112_04587"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="77"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="110"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="162"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="212"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="262"/>
            <end position="286"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="73"/>
            <end position="282"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ76414.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="292" mass="32160" checksum="45B70745FB38518B" modified="2015-12-09" version="1">MATQQSRSAARMMMAPAVVLLLGWMLIPLCMTLFFSFKKYLPLRGDSMANGLEWVGFTNYVRFVSSSSFWPSIQTTLIIVGGVLVITIALGIALAILLDQPMWGQGVVRILVIAPFFVMPTVSALVWKNMFMDPVNGILAHLWKFFGAEPIQWLSQASLPSLVMIVSWQWLPFATLILLTAIQSLDSEQLEAAEMDGAPVHKRFFFIVLPHLARAITIVTLIQTIFLLAIFAEIFVTTGGAFGTKTLSYLIFQRVLESQNVGLGSAGGVYAIILANIVAIFLMRIVGKNLDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASX7</accession>
    <name>A0A0M7ASX7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Putative permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">LAX5112_04978</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the UPF0718 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000037">
        <property type="protein sequence ID" value="CTQ77611.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77611">
        <property type="protein sequence ID" value="CTQ77611"/>
        <property type="gene ID" value="LAX5112_04978"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005524">
        <property type="entry name" value="DUF318"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03773">
        <property type="entry name" value="ArsP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="38"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="68"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="109"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="170"/>
            <end position="193"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="244"/>
            <end position="267"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="273"/>
            <end position="294"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="315"/>
            <end position="337"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="343"/>
            <end position="361"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006386"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ77611.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="365" mass="37954" checksum="010D584AC46E2941" modified="2015-12-09" version="1">MTETVDVAQNTSCCASGTDGQGTSKKTWSFKRFPGRDYILSPWAIVVTVPVLVLLLDQVQFVPFVSFAIQAFLGTLPYIAFAVLLIAWLKAAGAESYVGKAFEGRETQAIVLAALFGGLAPFCSCEVIPFIAGLLAVGAPLSAIMAFWLSSPLIDPPTLLITAGALGWEFAIGKAVFAVALGLFGGALVAFAIRSGLFSDPVRVGSSVSGCGCGTSPKTGRPVWQFWKEGERTSTFGAELKANALFLVKWLALAYVLEALLVTYVPADMIARVVGGEGVGTIVISALVGMPAYLNSYVAPPLLAGLMDQGMGAGAAMAFMIAGAVSSIPAMAAVWSLVKPPVFATYLGLGFTGAVLSGLLFQMIV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ATA9</accession>
    <name>A0A0M7ATA9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Beta-lactamase hydrolase-like protein</fullName>
            <ecNumber evidence="2">3.-.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">blh_4</name>
        <name evidence="2" type="ORF">LAX5112_04997</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.-.-.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000038">
        <property type="protein sequence ID" value="CTQ77656.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04997"/>
    <dbReference type="EnsemblBacteria" id="CTQ77656">
        <property type="protein sequence ID" value="CTQ77656"/>
        <property type="gene ID" value="LAX5112_04997"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.15.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001279">
        <property type="entry name" value="Metallo-B-lactamas"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036866">
        <property type="entry name" value="RibonucZ/Hydroxyglut_hydro"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00753">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00849">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56281">
        <property type="entry name" value="SSF56281"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lactamase_B" evidence="1">
        <location>
            <begin position="63"/>
            <end position="243"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77656.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="260" mass="27723" checksum="489947506EF3601A" modified="2015-12-09" version="1">MDHYKHAALAICPVFVTRGRITFIQEITVAQDMSNSDSGAGETGQGEEMPPIQIMIVPVTGFQQNCSVIWNPATMVGAVVDPGGDVDTIMAAVKEKGVKVEKIVLTHGHIDHIGGAADLAERLSVPVEGPHEADQPLIDRVADQAAQFGMGEAKPVSPDKWMQEGDVLTMAGREFDVLHCPGHSPGHLVFIDKELRLAISGDVLFAGSIGRTDLPGGSHETLIKSITEKLLPLGDDISFLPGHGPASTFGHERQTNPFLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AV41</accession>
    <name>A0A0M7AV41_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Sulfoacetaldehyde acetyltransferase</fullName>
            <ecNumber evidence="4">2.3.3.15</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">xsc_3</name>
        <name evidence="10" type="ORF">LAX5112_05002</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>thiamine diphosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58937"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="3 6">Belongs to the TPP enzyme family.</text>
    </comment>
    <dbReference type="EC" id="2.3.3.15" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000039">
        <property type="protein sequence ID" value="CTQ77663.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674125.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000039.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_05002"/>
    <dbReference type="EnsemblBacteria" id="CTQ77663">
        <property type="protein sequence ID" value="CTQ77663"/>
        <property type="gene ID" value="LAX5112_05002"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050487">
        <property type="term" value="F:sulfoacetaldehyde acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030976">
        <property type="term" value="F:thiamine pyrophosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019529">
        <property type="term" value="P:taurine catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029035">
        <property type="entry name" value="DHS-like_NAD/FAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017820">
        <property type="entry name" value="Sulphoacetald_Actrfrase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029061">
        <property type="entry name" value="THDP-binding"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012000">
        <property type="entry name" value="Thiamin_PyroP_enz_cen_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012001">
        <property type="entry name" value="Thiamin_PyroP_enz_TPP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000399">
        <property type="entry name" value="TPP-bd_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045229">
        <property type="entry name" value="TPP_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011766">
        <property type="entry name" value="TPP_enzyme-bd_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18968">
        <property type="entry name" value="PTHR18968"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02775">
        <property type="entry name" value="TPP_enzyme_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00205">
        <property type="entry name" value="TPP_enzyme_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02776">
        <property type="entry name" value="TPP_enzyme_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52467">
        <property type="entry name" value="SSF52467"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52518">
        <property type="entry name" value="SSF52518"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03457">
        <property type="entry name" value="sulphoacet_xsc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00187">
        <property type="entry name" value="TPP_ENZYMES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 10" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0786">Thiamine pyrophosphate</keyword>
    <keyword evidence="10" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="TPP_enzyme_N" evidence="9">
        <location>
            <begin position="3"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="domain" description="TPP_enzyme_M" evidence="7">
        <location>
            <begin position="187"/>
            <end position="323"/>
        </location>
    </feature>
    <feature type="domain" description="TPP_enzyme_C" evidence="8">
        <location>
            <begin position="404"/>
            <end position="555"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001964"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007812"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012971"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU362132"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00205"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF02775"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF02776"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ77663.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="590" mass="63254" checksum="EAAE83F096239080" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZN60</accession>
    <name>A0A0M6ZN60_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 8">Glutamine--fructose-6-phosphate aminotransferase [isomerizing]</fullName>
            <ecNumber evidence="2 8">2.6.1.16</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">D-fructose-6-phosphate amidotransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="8">GFAT</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="8">Glucosamine-6-phosphate synthase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="8">Hexosephosphate aminotransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="8">L-glutamine--D-fructose-6-phosphate amidotransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="primary">nodM</name>
        <name evidence="8" type="synonym">glmS</name>
        <name evidence="11" type="ORF">LAX5112_00214</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 8">
            <text>D-fructose 6-phosphate + L-glutamine = D-glucosamine 6-phosphate + L-glutamate</text>
            <dbReference type="Rhea" id="RHEA:13237"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="ChEBI" id="CHEBI:58725"/>
            <dbReference type="ChEBI" id="CHEBI:61527"/>
            <dbReference type="EC" id="2.6.1.16"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="8">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EC" id="2.6.1.16" evidence="2 8"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64198.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670213.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00214"/>
    <dbReference type="EnsemblBacteria" id="CTQ64198">
        <property type="protein sequence ID" value="CTQ64198"/>
        <property type="gene ID" value="LAX5112_00214"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0097367">
        <property type="term" value="F:carbohydrate derivative binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004360">
        <property type="term" value="F:glutamine-fructose-6-phosphate transaminase (isomerizing) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901137">
        <property type="term" value="P:carbohydrate derivative biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006541">
        <property type="term" value="P:glutamine metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd05008">
        <property type="entry name" value="SIS_GlmS_GlmD_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd05009">
        <property type="entry name" value="SIS_GlmS_GlmD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00164">
        <property type="entry name" value="GlmS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017932">
        <property type="entry name" value="GATase_2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035466">
        <property type="entry name" value="GlmS/AgaS_SIS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035490">
        <property type="entry name" value="GlmS/FrlB_SIS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005855">
        <property type="entry name" value="GlmS_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029055">
        <property type="entry name" value="Ntn_hydrolases_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001347">
        <property type="entry name" value="SIS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046348">
        <property type="entry name" value="SIS_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10937:SF0">
        <property type="entry name" value="PTHR10937:SF0"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01380">
        <property type="entry name" value="SIS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53697">
        <property type="entry name" value="SSF53697"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56235">
        <property type="entry name" value="SSF56235"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01135">
        <property type="entry name" value="glmS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51278">
        <property type="entry name" value="GATASE_TYPE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51464">
        <property type="entry name" value="SIS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 8 11" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="8" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7" id="KW-0315">Glutamine amidotransferase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0677">Repeat</keyword>
    <keyword evidence="5 8 11" id="KW-0808">Transferase</keyword>
    <feature type="initiator methionine" description="Removed" evidence="8">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="domain" description="Glutamine amidotransferase type-2" evidence="9">
        <location>
            <begin position="2"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="domain" description="SIS" evidence="10">
        <location>
            <begin position="282"/>
            <end position="423"/>
        </location>
    </feature>
    <feature type="domain" description="SIS" evidence="10">
        <location>
            <begin position="456"/>
            <end position="598"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile; for GATase activity" evidence="8">
        <location>
            <position position="2"/>
        </location>
    </feature>
    <feature type="active site" description="For Fru-6P isomerization activity" evidence="8">
        <location>
            <position position="603"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001031"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012916"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00016090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022576"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00164"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51278"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ64198.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="608" mass="64893" checksum="FB916F74FDE843E3" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZNA1</accession>
    <name>A0A0M6ZNA1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Inner membrane protein YibH</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yibH_1</name>
        <name evidence="3" type="ORF">LAX5112_00037</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63702.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670098.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00037"/>
    <dbReference type="EnsemblBacteria" id="CTQ63702">
        <property type="protein sequence ID" value="CTQ63702"/>
        <property type="gene ID" value="LAX5112_00037"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039562">
        <property type="entry name" value="MFP_biotin_lipoyl_2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13533">
        <property type="entry name" value="Biotin_lipoyl_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Biotin_lipoyl_2" evidence="2">
        <location>
            <begin position="74"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="135"/>
            <end position="195"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13533"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ63702.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="409" mass="44840" checksum="DB9ECDA0021C12D7" modified="2015-12-09" version="1">MLELLFSALITILPDYLYRRYKQGKRLGHEINLFTVWYELRWGITSCAVLAISLLTVIFYFHPTTTNVTSLFRTVSILSDRPGRVEEVYVADNQFVRAGEPIFRLDTQRQQAAAETARRRTAEVEAAILVGQAELAAAEGNIVASESQLRQAQDDLTRRLDLSERNQNVVTEQELERLRLSVEGLTGSLEAIKAQRDAIQTRLRVLLPAQKSSAEAALAQAETEIEKSTVFAGTNGTVRQFKLQPGDLVNPILRPAGILVPEGSGRGRFQAGFGQISAQILHIGTIVEITCASKPLAVIPMAVTEIQDAISGGQLRPTDQLIDIQDRARPGTILTVLEPVFEGHADYIPPGSRCIGVAYSNHDKAIKSGEISGFSAFLFRIVDGMGIANALVIRIQSLLLPVKVLVFPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZNB7</accession>
    <name>A0A0M6ZNB7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00237</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64265.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040450479.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ64265">
        <property type="protein sequence ID" value="CTQ64265"/>
        <property type="gene ID" value="LAX5112_00237"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005808970" evidence="1">
        <location>
            <begin position="22"/>
            <end position="156"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64265.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="156" mass="17804" checksum="D9CFA8F2E2CE1E29" modified="2015-12-09" version="1">MTIRNALLAAITLLVPVSAQASGIPQPGDFYFISRDQQGTFVGSHKLYLEYSSGLKQVSYCNRDYYVRSHSVAWTQFETELGRTVQIEYNFGRGWRPICERPQDQVALADLGIDMQPREFLQQSQNDDKPVSRLSAISGIFNKSKAESRYKSYHTR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZNV6</accession>
    <name>A0A0M6ZNV6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Aldehyde oxidoreductase</fullName>
            <ecNumber evidence="4">1.2.99.7</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">mop_1</name>
        <name evidence="4" type="ORF">LAX5112_00305</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.2.99.7" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64459.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670280.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00305"/>
    <dbReference type="EnsemblBacteria" id="CTQ64459">
        <property type="protein sequence ID" value="CTQ64459"/>
        <property type="gene ID" value="LAX5112_00305"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051537">
        <property type="term" value="F:2 iron, 2 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033727">
        <property type="term" value="F:aldehyde dehydrogenase (FAD-independent) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071949">
        <property type="term" value="F:FAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004854">
        <property type="term" value="F:xanthine dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004855">
        <property type="term" value="F:xanthine oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00207">
        <property type="entry name" value="fer2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.43.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.465.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002888">
        <property type="entry name" value="2Fe-2S-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036884">
        <property type="entry name" value="2Fe-2S-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036010">
        <property type="entry name" value="2Fe-2S_ferredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001041">
        <property type="entry name" value="2Fe-2S_ferredoxin-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006058">
        <property type="entry name" value="2Fe2S_fd_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016208">
        <property type="entry name" value="Ald_Oxase/xanthine_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012675">
        <property type="entry name" value="Beta-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005107">
        <property type="entry name" value="CO_DH_flav_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036683">
        <property type="entry name" value="CO_DH_flav_C_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016166">
        <property type="entry name" value="FAD-bd_PCMH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036318">
        <property type="entry name" value="FAD-bd_PCMH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016167">
        <property type="entry name" value="FAD-bd_PCMH_sub1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016169">
        <property type="entry name" value="FAD-bd_PCMH_sub2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002346">
        <property type="entry name" value="Mopterin_DH_FAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012175">
        <property type="entry name" value="Xanth_DH_ssu_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014307">
        <property type="entry name" value="Xanthine_DH_ssu"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11908">
        <property type="entry name" value="PTHR11908"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03450">
        <property type="entry name" value="CO_deh_flav_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00941">
        <property type="entry name" value="FAD_binding_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01799">
        <property type="entry name" value="Fer2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF036557">
        <property type="entry name" value="XdhA_RC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01092">
        <property type="entry name" value="CO_deh_flav_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47741">
        <property type="entry name" value="SSF47741"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54292">
        <property type="entry name" value="SSF54292"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55447">
        <property type="entry name" value="SSF55447"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56176">
        <property type="entry name" value="SSF56176"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02963">
        <property type="entry name" value="xanthine_xdhA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00197">
        <property type="entry name" value="2FE2S_FER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51387">
        <property type="entry name" value="FAD_PCMH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0274">FAD</keyword>
    <keyword evidence="1" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="2 4" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FAD-binding PCMH-type" evidence="3">
        <location>
            <begin position="190"/>
            <end position="364"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51387"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ64459.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="493" mass="53371" checksum="D18648F2832D9FE2" modified="2015-12-09" version="1">MRDTIRFIKGGETVELHDVGPTESLLDYLRLRRKETGTKEGCGEGDCGACTVALGRVIDGRLIYQPVNSCIQLLGMVDGAELVTVEDLAQDKRLHPVQQAMMELHGSQCGFCTPGFIMTLFTLYHAEGEAKSRKTVTEWLAGNLCRCTGYRPIVDAALEACFNLADDAFTWRSNETREQLKKLADSRDIFLGTSDRFFSSPASLDGLAALYGQHPDATLVSGATDVGLWITKHLRDLPKTIWLGRIEGLDRVEESESGILMGATATFAATEAAMTRISPDLGELWKRIGSKQVRASGTVGGNIANGSPIGDSPPALIALGATLELQSADTDRALALEDFFIDYGKQDRLPGEFVTGLFVPRPSANQVFHCYKISKRFDQDISSVMAAFRFTIVDGRIIDARIAYGGMAGTPKRASGAEAALKGAILEDASTWAAAIEALNSDFTPLTDMRASAEYRMETARALLAKALMETDGTAAESVRVLAKREADHDRAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZP63</accession>
    <name>A0A0M6ZP63_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Cyclic di-GMP phosphodiesterase Gmr</fullName>
            <ecNumber evidence="5">3.1.4.52</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">gmr_2</name>
        <name evidence="5" type="ORF">LAX5112_00195</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.4.52" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64147.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670197.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00195"/>
    <dbReference type="EnsemblBacteria" id="CTQ64147">
        <property type="protein sequence ID" value="CTQ64147"/>
        <property type="gene ID" value="LAX5112_00195"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071111">
        <property type="term" value="F:cyclic-guanylate-specific phosphodiesterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01948">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.450">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021800">
        <property type="entry name" value="DUF3369"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001633">
        <property type="entry name" value="EAL_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035919">
        <property type="entry name" value="EAL_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000160">
        <property type="entry name" value="GGDEF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11849">
        <property type="entry name" value="DUF3369"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00563">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00990">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00052">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00267">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141868">
        <property type="entry name" value="SSF141868"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50883">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50887">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="2">
        <location>
            <begin position="22"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="domain" description="GGDEF" evidence="4">
        <location>
            <begin position="346"/>
            <end position="478"/>
        </location>
    </feature>
    <feature type="domain" description="EAL" evidence="3">
        <location>
            <begin position="487"/>
            <end position="740"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="1">
        <location>
            <position position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ64147.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="747" mass="82513" checksum="F12BCDAAAFD6A676" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPJ4</accession>
    <name>A0A0M6ZPJ4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Acetolactate synthase large subunit</fullName>
            <ecNumber evidence="6">2.2.1.6</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">ilvB</name>
        <name evidence="6" type="ORF">LAX5112_00358</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the TPP enzyme family.</text>
    </comment>
    <dbReference type="EC" id="2.2.1.6" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64668.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670347.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00358"/>
    <dbReference type="EnsemblBacteria" id="CTQ64668">
        <property type="protein sequence ID" value="CTQ64668"/>
        <property type="gene ID" value="LAX5112_00358"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003984">
        <property type="term" value="F:acetolactate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030976">
        <property type="term" value="F:thiamine pyrophosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044281">
        <property type="term" value="P:small molecule metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029035">
        <property type="entry name" value="DHS-like_NAD/FAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029061">
        <property type="entry name" value="THDP-binding"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012000">
        <property type="entry name" value="Thiamin_PyroP_enz_cen_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012001">
        <property type="entry name" value="Thiamin_PyroP_enz_TPP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000399">
        <property type="entry name" value="TPP-bd_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045229">
        <property type="entry name" value="TPP_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011766">
        <property type="entry name" value="TPP_enzyme-bd_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18968">
        <property type="entry name" value="PTHR18968"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02775">
        <property type="entry name" value="TPP_enzyme_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00205">
        <property type="entry name" value="TPP_enzyme_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02776">
        <property type="entry name" value="TPP_enzyme_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52467">
        <property type="entry name" value="SSF52467"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52518">
        <property type="entry name" value="SSF52518"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00187">
        <property type="entry name" value="TPP_ENZYMES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0786">Thiamine pyrophosphate</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="TPP_enzyme_N" evidence="5">
        <location>
            <begin position="5"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="domain" description="TPP_enzyme_M" evidence="3">
        <location>
            <begin position="191"/>
            <end position="325"/>
        </location>
    </feature>
    <feature type="domain" description="TPP_enzyme_C" evidence="4">
        <location>
            <begin position="385"/>
            <end position="530"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007812"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU362132"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00205"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF02775"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF02776"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ64668.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="554" mass="59962" checksum="FD9E1E97C1253B68" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPW2</accession>
    <name>A0A0M6ZPW2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 6">Thymidylate kinase</fullName>
            <ecNumber evidence="3 6">2.7.4.9</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5 6">dTMP kinase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6 8" type="primary">tmk</name>
        <name evidence="8" type="ORF">LAX5112_00282</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 6">
            <text>ATP + dTMP = ADP + dTDP</text>
            <dbReference type="Rhea" id="RHEA:13517"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:58369"/>
            <dbReference type="ChEBI" id="CHEBI:63528"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.4.9"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the thymidylate kinase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.4.9" evidence="3 6"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64397.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670262.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00282"/>
    <dbReference type="EnsemblBacteria" id="CTQ64397">
        <property type="protein sequence ID" value="CTQ64397"/>
        <property type="gene ID" value="LAX5112_00282"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004798">
        <property type="term" value="F:thymidylate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006233">
        <property type="term" value="P:dTDP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006235">
        <property type="term" value="P:dTTP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00165">
        <property type="entry name" value="Thymidylate_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039430">
        <property type="entry name" value="Thymidylate_kin-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018095">
        <property type="entry name" value="Thymidylate_kin_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018094">
        <property type="entry name" value="Thymidylate_kinase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02223">
        <property type="entry name" value="Thymidylate_kin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00041">
        <property type="entry name" value="DTMP_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01331">
        <property type="entry name" value="THYMIDYLATE_KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6 8" id="KW-0418">Kinase</keyword>
    <keyword evidence="6" id="KW-0545">Nucleotide biosynthesis</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 8" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Thymidylate_kin" evidence="7">
        <location>
            <begin position="8"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="10"/>
            <end position="17"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009776"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00017144"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00029962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00165"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF02223"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ64397.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="224" mass="24103" checksum="3AE24C874ED93A8D" modified="2015-12-09" version="1">MQGHFISFEGGEGAGKSTQITRLKAFLESLGKTVIVTREPGGSPGAEKIRAMLLSGEARDLGPRGEAMLFAAARADHVDTLIKPALDRGDWVLCDRYSDSTLVYQGEAGVDLNYLRLLETAAVAGVRPELTILIDVPAELGLARVQERAKTDTSGGPDRFEGEALRVHEGRRKRFLDLAAEEAYRFAVIDGSKDLEAVSASIQSAVEAAFQDQLTTDTPAQEAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQ77</accession>
    <name>A0A0M6ZQ77_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">50S ribosomal protein L13</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4 6" type="primary">rplM</name>
        <name evidence="6" type="ORF">LAX5112_00021</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Part of the 50S ribosomal subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the universal ribosomal protein uL13 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63654.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040452103.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00021"/>
    <dbReference type="EnsemblBacteria" id="CTQ63654">
        <property type="protein sequence ID" value="CTQ63654"/>
        <property type="gene ID" value="LAX5112_00021"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00392">
        <property type="entry name" value="Ribosomal_L13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1180.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01366">
        <property type="entry name" value="Ribosomal_L13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005822">
        <property type="entry name" value="Ribosomal_L13"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005823">
        <property type="entry name" value="Ribosomal_L13_bac-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036899">
        <property type="entry name" value="Ribosomal_L13_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11545">
        <property type="entry name" value="PTHR11545"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00572">
        <property type="entry name" value="Ribosomal_L13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002181">
        <property type="entry name" value="Ribosomal_L13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52161">
        <property type="entry name" value="SSF52161"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01066">
        <property type="entry name" value="rplM_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4 6" id="KW-0689">Ribosomal protein</keyword>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="128"/>
            <end position="155"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006227"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01366"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ63654.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="155" mass="17306" checksum="64FF92BBF5C25487" modified="2015-12-09" version="1">MKTFSAKPAEVEKKWILIDAEGMVVGRLAAYIANHLRGKHLPTYTPHVDTGDNIIVVNADKVVLTGRKYDNKKYYWHTGHPGGIKERTARAIMEGRFPERVLEKAVQRMMPGGPLSNKQLSNLKVYAGPKHPHEAQSPELVDVKSLNAKNDGKRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQW4</accession>
    <name>A0A0M6ZQW4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Putative cytosol aminopeptidase</fullName>
            <ecNumber evidence="7">3.4.11.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">pepA_1</name>
        <name evidence="7" type="ORF">LAX5112_00534</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase M17 family.</text>
    </comment>
    <dbReference type="EC" id="3.4.11.1" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65169.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670476.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00534"/>
    <dbReference type="EnsemblBacteria" id="CTQ65169">
        <property type="protein sequence ID" value="CTQ65169"/>
        <property type="gene ID" value="LAX5112_00534"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030145">
        <property type="term" value="F:manganese ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070006">
        <property type="term" value="F:metalloaminopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00433">
        <property type="entry name" value="Peptidase_M17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.220.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011356">
        <property type="entry name" value="Leucine_aapep/pepB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043472">
        <property type="entry name" value="Macro_dom-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000819">
        <property type="entry name" value="Peptidase_M17_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11963">
        <property type="entry name" value="PTHR11963"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00883">
        <property type="entry name" value="Peptidase_M17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00481">
        <property type="entry name" value="LAMNOPPTDASE"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00631">
        <property type="entry name" value="CYTOSOL_AP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 7" id="KW-0031">Aminopeptidase</keyword>
    <keyword evidence="4 7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-0464">Manganese</keyword>
    <keyword evidence="3" id="KW-0645">Protease</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CYTOSOL_AP" evidence="6">
        <location>
            <begin position="308"/>
            <end position="315"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009528"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS00631"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ65169.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="465" mass="49159" checksum="BF22C997CB69F95C" modified="2015-12-09" version="1">MRETLIRQSDAQSSVPIVAVDAESLETVLIGLGETAKVWCRANGYSAKPSSFQLVPGLSGDLQAVLFGVDSGGDADPFSLGSLANALPRGDYHLADGFSGTAEASLAFALSSYKFDRYSSSSNQKAVRLCVPSDVDLDRLSAILDGVQLARDLINTPANDLGPEELASAVETLFMENGGSGQITVGDGLLKQGFPMVHAVGRASSRAPRIADYSWGAEDAPKVTLVGKGVIFDTGGLNLKPGNSMGLMKKDMGGAANVLGLASMIMAAKLPVRLRVIVPCVENAVSGNAFRPGDVLNSRKGLTVEIGNTDAEGRLILADALALADEESPEVLIDMATLTGAARVALGPDLPPFYTNDEALADDISVMSEAATDPLWRLPLWKPYMKYLDSKVADINHINTSGTGYAGSITAALFLSRFVEKAESWVHFDIFGWTPAEKPGKPMGGEAQGIRALFDLLSERYTKTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZR01</accession>
    <name>A0A0M6ZR01_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Invasion protein B, involved in pathogenesis</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00395</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64767.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00395"/>
    <dbReference type="EnsemblBacteria" id="CTQ64767">
        <property type="protein sequence ID" value="CTQ64767"/>
        <property type="gene ID" value="LAX5112_00395"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038696">
        <property type="entry name" value="IalB_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010642">
        <property type="entry name" value="Invasion_prot_B"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06776">
        <property type="entry name" value="IalB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005808906" evidence="1">
        <location>
            <begin position="24"/>
            <end position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64767.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="164" mass="17508" checksum="393B5D06052FDC78" modified="2015-12-09" version="1">MRLSLSLTAVLTIVFLQGTPIHAQQAEQGELWQTRCAGTSRSAEALTCEASQSLRVKESGQLLFKVDIIYPGNNAAPVFQMQAPLGFYLPGKVKLTIDGAQIGDMTISTCDQRGCYISAPATDAMIDAMKAGAQLQIDFAASASQRQKIDVPLTGFSRAIAAIQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRV2</accession>
    <name>A0A0M6ZRV2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">D-threonine aldolase</fullName>
            <ecNumber evidence="3">4.1.2.42</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_00648</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the DSD1 family.</text>
    </comment>
    <dbReference type="EC" id="4.1.2.42" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65485.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670600.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00648"/>
    <dbReference type="EnsemblBacteria" id="CTQ65485">
        <property type="protein sequence ID" value="CTQ65485"/>
        <property type="gene ID" value="LAX5112_00648"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043876">
        <property type="term" value="F:D-threonine aldolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.37.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001608">
        <property type="entry name" value="Ala_racemase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026956">
        <property type="entry name" value="D-ser_dehydrat-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042208">
        <property type="entry name" value="D-ser_dehydrat-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029066">
        <property type="entry name" value="PLP-binding_barrel"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01168">
        <property type="entry name" value="Ala_racemase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14031">
        <property type="entry name" value="D-ser_dehydrat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01119">
        <property type="entry name" value="D-ser_dehydrat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51419">
        <property type="entry name" value="SSF51419"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0456">Lyase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="D-ser_dehydrat" evidence="2">
        <location>
            <begin position="244"/>
            <end position="334"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005323"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM01119"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ65485.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="351" mass="37328" checksum="75BE5D873F528C36" modified="2015-12-09" version="1">MSFEDIQTPAVLVDLDIAEANIEAYQAYCTKHGLALRPHIKTHKLPFLAKRQLNAGAIGITCQKISEAEAMIADGGINDVLITFNILGAEKLERLKALAGKVRLSVVADNTSTVKGLSDAFSDTDSPLTVLVECDTGAERCGVTSPEAARDLAQVMNQSPGLTFGGLMTYPPAGREAEVHDWLTKARDMIEADALQVAVISNGGSPGMWQADAVPVATEYRIGTYVYNDRSLVERGVCDWGDCALTVLATVVSVPAADRAVIDAGTKVLTSDLLGLNGHGHVLGRPDITVDALSEEHGVLRAETIGLEVGDRIRIVPNHVCVVSNMVDEVQLIRGERDLGPSPVSARGKVI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSS9</accession>
    <name>A0A0M6ZSS9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">23S rRNA (Uridine(2479)-2'-O)-methyltransferase</fullName>
            <ecNumber evidence="5">2.1.1.208</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">aviRb</name>
        <name evidence="5" type="ORF">LAX5112_00587</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.1.1.208" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65322.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670516.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00587"/>
    <dbReference type="EnsemblBacteria" id="CTQ65322">
        <property type="protein sequence ID" value="CTQ65322"/>
        <property type="gene ID" value="LAX5112_00587"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008173">
        <property type="term" value="F:RNA methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006396">
        <property type="term" value="P:RNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1280.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029028">
        <property type="entry name" value="Alpha/beta_knot_MTases"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029064">
        <property type="entry name" value="L30e-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001537">
        <property type="entry name" value="SpoU_MeTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013123">
        <property type="entry name" value="SpoU_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029026">
        <property type="entry name" value="tRNA_m1G_MTases_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00588">
        <property type="entry name" value="SpoU_methylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08032">
        <property type="entry name" value="SpoU_sub_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00967">
        <property type="entry name" value="SpoU_sub_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55315">
        <property type="entry name" value="SSF55315"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75217">
        <property type="entry name" value="SSF75217"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 5" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="2 5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="SpoU_sub_bind" evidence="4">
        <location>
            <begin position="44"/>
            <end position="120"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ65322.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="280" mass="29904" checksum="7E9E0553F8216101" modified="2015-12-09" version="1">MPQTGKPQKIGAVKQITSHSNPIVKEIKGLVGQRKHRTQSGLFVAEGLKLATDALSAGWGVRYLALGPEARDNPVAQKAAATAKARGALILEVSTAVMSAMTRKDNPQMVVGVYEQNILSARDIDPQGTTVWVALDRVRDPGNLGTIIRTVDAVGGSGVMLVGDCTDPFAVEAVRATMGSLFHVPLAKMTKDEFKALAKDWPGTVAATHLKGSVDYRTPDYKQPALLVMGNEQKGLEDDTAAACRTLIRIPQVGEADSLNLAVATGISLYEIRRNHLELS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZT68</accession>
    <name>A0A0M6ZT68_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00820</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65965.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ65965">
        <property type="protein sequence ID" value="CTQ65965"/>
        <property type="gene ID" value="LAX5112_00820"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ65965.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="50" mass="5360" checksum="E2DC062C88376AD0" modified="2015-12-09" version="1">MTLTDALQAEVLLLTINAPSRRVSEIAIANGLVVWPKPANEKTEKALVSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZT93</accession>
    <name>A0A0M6ZT93_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Ribosomal RNA large subunit methyltransferase I</fullName>
            <ecNumber evidence="5">2.1.1.191</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">rlmI</name>
        <name evidence="5" type="ORF">LAX5112_00583</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.1.1.191" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65310.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670512.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00583"/>
    <dbReference type="EnsemblBacteria" id="CTQ65310">
        <property type="protein sequence ID" value="CTQ65310"/>
        <property type="gene ID" value="LAX5112_00583"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1180">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013780">
        <property type="entry name" value="Glyco_hydro_b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019614">
        <property type="entry name" value="SAM-dep_methyl-trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10672">
        <property type="entry name" value="Methyltrans_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 5" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="2 5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Methyltrans_SAM" evidence="4">
        <location>
            <begin position="97"/>
            <end position="257"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF10672"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ65310.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="317" mass="35752" checksum="EB80E93AE92D9537" modified="2015-12-09" version="1">MAEKTDAPEFAKPGQPPVQAWPVILETPGWKDYRLLDMGEGQKLERYGRYTIVRPEPQAMGSRRLKNTVWDRANAVFSGDTDEEGPGRWKYSGNVSETWPMSYGPVTYNGRFMSFRHVGVFPEQAAHWDWVNSRIRAERKKNSEKPLKILNLFGYTGLASLLPATEGAQVTHVDASKKAIGYARENQALSGLEDLPIRWICEDASKFVAREVRRGNTYDGIILDPPKYGRGPKGEVWDIYTSLPGMLKDLQQLLSKDALFMILTAYAIRSSFVSIHELMAETLSKQGGRLESGELVIREEDGSRALSTSLFSRWSSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTG3</accession>
    <name>A0A0M6ZTG3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Methyl-accepting chemotaxis protein 4</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">mcp4_2</name>
        <name evidence="5" type="ORF">LAX5112_00607</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65380.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00607"/>
    <dbReference type="EnsemblBacteria" id="CTQ65380">
        <property type="protein sequence ID" value="CTQ65380"/>
        <property type="gene ID" value="LAX5112_00607"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004888">
        <property type="term" value="F:transmembrane signaling receptor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006935">
        <property type="term" value="P:chemotaxis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004090">
        <property type="entry name" value="Chemotax_Me-accpt_rcpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004089">
        <property type="entry name" value="MCPsignal_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00015">
        <property type="entry name" value="MCPsignal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00260">
        <property type="entry name" value="CHEMTRNSDUCR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00283">
        <property type="entry name" value="MA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50111">
        <property type="entry name" value="CHEMOTAXIS_TRANSDUC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0807">Transducer</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="45"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="76"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="domain" description="Methyl-accepting transducer" evidence="4">
        <location>
            <begin position="170"/>
            <end position="399"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="100"/>
            <end position="127"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ65380.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="419" mass="43973" checksum="7E6352D8D7891E31" modified="2015-12-09" version="1">MSLAGLAALFVAALHTPNVEASYQLDGHMYFFAVLAVLTGWVDWRALVAYAGVVAVHHLGLNFAMPWAVFPAGADFGRVVFHAIIVVAEVAALWWITNFIAKAFAASDEAREEAEAAQAETQSLQTQDEERAEIERAKQVAITKRIGQFQSEIATKLNGVTAKVEEMRGSAQELGQIAEDTTVRATSVSDASETASSNVQTVASAAEELSSSISEISRQVEQTTGIVMKATENAQTSNQKVAGLAEAANRIGEVVTLIQAIAEQTNLLALNATIEAARAGEAGKGFAVVAAEVKELATQTSKATEEIGAQISAIQEETKGAVESIGAIASTMDEVNSYTAAIAAAVEQQGGATQEISRNVAEAADGTGRVATNIGDVRESAERTGASARLMVDATQMLNEEADDVKRAIDTFLKDVAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTH0</accession>
    <name>A0A0M6ZTH0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Formyl-coenzyme A transferase</fullName>
            <ecNumber evidence="1">2.8.3.16</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">frc_1</name>
        <name evidence="1" type="ORF">LAX5112_00862</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.8.3.16" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66079.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670850.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00862"/>
    <dbReference type="EnsemblBacteria" id="CTQ66079">
        <property type="protein sequence ID" value="CTQ66079"/>
        <property type="gene ID" value="LAX5112_00862"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033608">
        <property type="term" value="F:formyl-CoA transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1540.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10540">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003673">
        <property type="entry name" value="CoA-Trfase_fam_III"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044855">
        <property type="entry name" value="CoA-Trfase_III_dom3_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023606">
        <property type="entry name" value="CoA-Trfase_III_dom_1_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02515">
        <property type="entry name" value="CoA_transf_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89796">
        <property type="entry name" value="SSF89796"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ66079.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="397" mass="42242" checksum="D0634FC4CE8D7B6B" modified="2015-12-09" version="1">MTKPLDGIRVLDLTNVLAGPFACHQLAHLGAEVIKVEAVGRGDLARNLGADPDLSAKGMGISFLAQNAGKKSLTLNLKDPRGKDVLKRLVAGADVLVENFRPGVMDRLGLGYEVLKAESPHLIYCAISGFGQDGPWAHRPAYDQIVQGASGVMSITGNADSAPLRVGYPLADTVGGLTAAMAICASLNAEKRGAFIDVSMLESVLATMGWVVSNHLIGGVAPTPNGNENPTSAPSGAFQCSDGLINIAANKDEQWDLLATHLGREDLVGHADFASREDRKRNRLRLKAELETVLTTRPAREWARELNKLGVPAGAVLSVPEVLDHPQIKDREFLARFDETPGVGKPIDLLRIGAMIDGTRPSVDTPPPALGADTERILTALGYTAEDIETLHKENVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTU4</accession>
    <name>A0A0M6ZTU4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">4-hydroxy-tetrahydrodipicolinate synthase</fullName>
            <ecNumber evidence="2">4.3.3.7</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">dapA_1</name>
        <name evidence="2" type="ORF">LAX5112_00655</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the DapA family.</text>
    </comment>
    <dbReference type="EC" id="4.3.3.7" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65500.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670605.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00655"/>
    <dbReference type="EnsemblBacteria" id="CTQ65500">
        <property type="protein sequence ID" value="CTQ65500"/>
        <property type="gene ID" value="LAX5112_00655"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008840">
        <property type="term" value="F:4-hydroxy-tetrahydrodipicolinate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002220">
        <property type="entry name" value="DapA-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12128">
        <property type="entry name" value="PTHR12128"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00701">
        <property type="entry name" value="DHDPS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001365">
        <property type="entry name" value="DHDPS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00146">
        <property type="entry name" value="DHPICSNTHASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM01130">
        <property type="entry name" value="DHDPS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 2" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRNR" id="PIRNR001365"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65500.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="307" mass="32813" checksum="37E8ADE1DC34618B" modified="2015-12-09" version="1">MTRLTEEAHGVYVIAVTPFNDNGALDMGSVDRMVDFYLDAGATGLTALGMMGEAPKLTTAESLEVVQRILARLNGRIPLVVGVSAPGFAQMAELSKASMDAGAGGVMIAPPGNLKTDAQIVTYYTQAAEFIGDVPFVLQDFPLATGVHIPVSAIARIVEDVPTCVCLKHEDWPGLEKISALRAEGTLARRISILCGNGGLFLPEEMDRGADGAMTGFCYPEMMRDIVRHSKAGDPARARDIFNAYLPLARYEQQPGLGLAVRKYVLAKRGVIGSAALRRPGAGLTKAAQAEVDTLLARQEERLKELN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTY5</accession>
    <name>A0A0M6ZTY5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">braC_5</name>
        <name evidence="3" type="ORF">LAX5112_00924</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66249.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670808.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00924"/>
    <dbReference type="EnsemblBacteria" id="CTQ66249">
        <property type="protein sequence ID" value="CTQ66249"/>
        <property type="gene ID" value="LAX5112_00924"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028081">
        <property type="entry name" value="Leu-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13458">
        <property type="entry name" value="Peripla_BP_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809070" evidence="1">
        <location>
            <begin position="29"/>
            <end position="399"/>
        </location>
    </feature>
    <feature type="domain" description="Peripla_BP_6" evidence="2">
        <location>
            <begin position="31"/>
            <end position="371"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13458"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ66249.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="399" mass="43198" checksum="2D43672DD5C3FF65" modified="2015-12-09" version="1">MTIRFSRWAAPLAAGLGLMAASALGASAEDIKIAHVYGKTGALEAYAKQSHTGLMMGLEYATDGTMEIDGRKIVVIEKDTQLKPDIAKGALAEAYGDDEVDVAVGPVSSGVALAMLPVAEEYEKILIVEPAVADSITGANWNRYIFRTSRNSSQDAIANAVALGQEGVSIATLAQDYAFGRDGVAAFKEALEGTGANLVFEEYAPTDTKDFTANAQRIFDALKDEPGRKFLFVIWAGGGNPISKIKAMEPERFGVEIATGGNILAAMKAYKDLPGMEGATYYYHEIPQNPVNDWLVAEHQKRFNSPPDFFTAGGMTAGLAIVEAIKKAGSTDTEDLIAAMEGMEFETPKGKMMFRPEDHQALQSMYHFKIKVDPDVEWGIPELVRELTIEDMNIPVRNQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZU26</accession>
    <name>A0A0M6ZU26_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Dipeptide transport system permease protein DppB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">dppB</name>
        <name evidence="8" type="ORF">LAX5112_00684</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="6">Cell membrane</location>
            <topology evidence="6">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65580.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670628.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00684"/>
    <dbReference type="EnsemblBacteria" id="CTQ65580">
        <property type="protein sequence ID" value="CTQ65580"/>
        <property type="gene ID" value="LAX5112_00684"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045621">
        <property type="entry name" value="BPD_transp_1_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19300">
        <property type="entry name" value="BPD_transp_1_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="100"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="133"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="243"/>
            <end position="262"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="268"/>
            <end position="284"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="291"/>
            <end position="314"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="7">
        <location>
            <begin position="94"/>
            <end position="311"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ65580.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="323" mass="35546" checksum="5811ED41B829D7CB" modified="2015-12-09" version="1">MLAFIIRRLGQALLVLMAVGFVSFAMFKFMGDPVESMLGQEATAADRAELEERLGLNDPIIVQYVRYFQRAMSGDFGVSYRVGLPVGEVILERLPATLELAFLSGVIAISLGFMLGVYTAIRRDGYVANFIMTASLIGVSLPTFLIGVFLIWLFAVNLGWLPSFGRGDTRSLFGVDLAILTVDGLKSMILPAITLGLYQMTLIMRLVRSEMLEVLRTDYIRFARARGLSQKTVNFGHAMKNTMVPVITVTGLQFGSIVAFAIITESVFQWPGVGLLFINAVNFVDIPVMSAYLLLVAVIFVTINLIVDLLYFTIDPRLSVGSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUP8</accession>
    <name>A0A0M6ZUP8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00979</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66468.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670891.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00979"/>
    <dbReference type="EnsemblBacteria" id="CTQ66468">
        <property type="protein sequence ID" value="CTQ66468"/>
        <property type="gene ID" value="LAX5112_00979"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009351">
        <property type="entry name" value="YcaQ-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06224">
        <property type="entry name" value="HTH_42"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ66468.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="403" mass="46260" checksum="B5C4EEED3A693340" modified="2015-12-09" version="1">MMSAAPTIIDNTTARQLFLDRHGLAALSGRATADRVNETISALGFVQVDSINTVSRAHHMILSSRLPGYKETHLKRLLEKDRHLFEHWTHDASVIPTASFPHWRLRFDRDRAKLIGRWRNWRQNGFEEKFNEVLKQVSDHGPVSSSTVGEDEARSKGGWWNWHPSKTALEFLWRTGELSVCHRRGFQKIYDLTERVIPQAHLAQRFDLEETIDWAARSALDRLGFATSGEIAAFWDLITPAEAKTWCEAKLASGEIMETLTEGADGSLRKSFLMPETLATLNTLPPLPSRVRILSPFDPALRDRKRAERLFGFHYRIEVFVPEPKRQYGYYVFPVLEGDSLIGRIDMKAYRSDDRLHVRAFWPEAKTRMGKGRVGKLESEIERIARFADCGSVSFESDWLRVP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUX9</accession>
    <name>A0A0M6ZUX9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Galactose/methyl galactoside import ATP-binding protein MglA</fullName>
            <ecNumber evidence="6">3.6.3.17</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">mglA_1</name>
        <name evidence="6" type="ORF">LAX5112_00566</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.17" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65263.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670498.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00566"/>
    <dbReference type="EnsemblBacteria" id="CTQ65263">
        <property type="protein sequence ID" value="CTQ65263"/>
        <property type="gene ID" value="LAX5112_00566"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="7"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="259"/>
            <end position="507"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="39"/>
            <end position="46"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ65263.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="517" mass="56319" checksum="6CC36562EB23CF9F" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVH3</accession>
    <name>A0A0M6ZVH3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">LIV-I protein H</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">livH_6</name>
        <name evidence="7" type="ORF">LAX5112_00921</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66241.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670805.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00921"/>
    <dbReference type="EnsemblBacteria" id="CTQ66241">
        <property type="protein sequence ID" value="CTQ66241"/>
        <property type="gene ID" value="LAX5112_00921"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001851">
        <property type="entry name" value="ABC_transp_permease"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02653">
        <property type="entry name" value="BPD_transp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="20"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="45"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="82"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="107"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="144"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="193"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="241"/>
            <end position="263"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="275"/>
            <end position="304"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="311"/>
            <end position="330"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ66241.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="342" mass="36359" checksum="1C3851C423990C1A" modified="2015-12-09" version="1">MSDTTIKPRIERVPATEQLVQKLPVLLVPVLALAGLLAIGNPSTWLTLTVAGLAMGMMIFIMASGLTVVFGLMDVINFGHGAFVTVGAFVGFTVLAWLTGWTASPSVLLNLSALLVAILAAMLITGGLGYAFERVIVKPVYGEHLKQILVTMGGLIVAQQMIHVVWGPDEMHLSRPEALQGSIVLGDAAIEKYRLVAVAIGLALFLAMRHILKNTKIGLLVRAGVENGEMVEALGYRVRRLFLIVFMTGSALAGLGGVMWGLYQETITAHMGSEIMVLVFIVVIIGGLGSVEGCFIGALLVGLLANYTAFLAPKVALISTIALMVAVLMWRPQGLYPVVKAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVR6</accession>
    <name>A0A0M6ZVR6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Transcriptional regulatory protein ZraR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">zraR_2</name>
        <name evidence="10" type="ORF">LAX5112_01118</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66855.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008193784.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01118"/>
    <dbReference type="EnsemblBacteria" id="CTQ66855">
        <property type="protein sequence ID" value="CTQ66855"/>
        <property type="gene ID" value="LAX5112_01118"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.450.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003018">
        <property type="entry name" value="GAF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029016">
        <property type="entry name" value="GAF-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002197">
        <property type="entry name" value="HTH_Fis"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002078">
        <property type="entry name" value="Sigma_54_int"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025662">
        <property type="entry name" value="Sigma_54_int_dom_ATP-bd_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025943">
        <property type="entry name" value="Sigma_54_int_dom_ATP-bd_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025944">
        <property type="entry name" value="Sigma_54_int_dom_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01590">
        <property type="entry name" value="GAF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02954">
        <property type="entry name" value="HTH_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00158">
        <property type="entry name" value="Sigma54_activat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01590">
        <property type="entry name" value="HTHFIS"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00675">
        <property type="entry name" value="SIGMA54_INTERACT_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00676">
        <property type="entry name" value="SIGMA54_INTERACT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00688">
        <property type="entry name" value="SIGMA54_INTERACT_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50045">
        <property type="entry name" value="SIGMA54_INTERACT_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0010">Activator</keyword>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0804">Transcription</keyword>
    <keyword evidence="4" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="3" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="domain" description="Sigma-54 factor interaction" evidence="9">
        <location>
            <begin position="221"/>
            <end position="450"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="203"/>
            <end position="222"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023159"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50045"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ66855.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="539" mass="58972" checksum="2E277AB14E9DAA90" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWZ2</accession>
    <name>A0A0M6ZWZ2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Phosphate-import permease protein PhnE</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">phnE_2</name>
        <name evidence="7" type="ORF">LAX5112_01081</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66756.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008192847.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01081"/>
    <dbReference type="EnsemblBacteria" id="CTQ66756">
        <property type="protein sequence ID" value="CTQ66756"/>
        <property type="gene ID" value="LAX5112_01081"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015416">
        <property type="term" value="F:ABC-type phosphonate transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005769">
        <property type="entry name" value="PhnE/PtxC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01097">
        <property type="entry name" value="PhnE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="23"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="253"/>
            <end position="279"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="300"/>
            <end position="324"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="387"/>
            <end position="403"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="415"/>
            <end position="436"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="249"/>
            <end position="433"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ66756.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="444" mass="49908" checksum="B094D58511EB6D97" modified="2015-12-09" version="1">MSNDTLEPVVTPNDVWQNVRKRAWITIAVPLGVLAYLSYTWFAFGVPELLSKAQPERAVILATDSVAHKIHVTKLLRRDILEVAIEGERRATFEETNMPDWVAVDDTDATVDLGDGYLVEIIGKRMDFTVPGYGVVTGIATNTGVDIILPEGDVPDYVKANPKKLDVRPTLDRRVQVTRTKIEVHNYFGGWENFWFPFHSELYGMSFSQLYALALSADRMDPNYSNLWFMVHEFLENPDWQHGEIFVALFETIMMAVLGTITAALFGLPLAFLAARNFTPSMFLRFGTRRLFDFLRGIDMLIWSLIFIRAFGLGPLTGALAIAFTDTGSLGKLFSEALENIDNKQVEGVRATGANQWQRYRFGVIPQILPVFVSQVLYYLESNTRSATVIGALGAGGIGLMLVETMKTSRDWENTSYIIILTIVVVIIMDQTSGWLRRKLIEGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXF9</accession>
    <name>A0A0M6ZXF9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01394</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67445.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671195.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67445">
        <property type="protein sequence ID" value="CTQ67445"/>
        <property type="gene ID" value="LAX5112_01394"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="57"/>
            <end position="146"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67445.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="153" mass="18082" checksum="130F5ECB7358E1BD" modified="2015-12-09" version="1">MAKDPEKCREATRKFNIAVSNWELKAQEYNFTKDSYESSYSNYNYEKLKRDSRKTEYSSAKNKYEAAKKALDNARWKDTPPDQITVLERRADAAERTKDAKQRSYESARDKVSRLKDYLDEQKRRVAGLKQELEGRRIVKEQLQRNKEIACAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZY08</accession>
    <name>A0A0M6ZY08_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Putative cysteine desulfurase</fullName>
            <ecNumber evidence="6">2.8.1.7</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">csd_2</name>
        <name evidence="6" type="ORF">LAX5112_00959</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 4">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.</text>
    </comment>
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        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670878.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00959"/>
    <dbReference type="EnsemblBacteria" id="CTQ66414">
        <property type="protein sequence ID" value="CTQ66414"/>
        <property type="gene ID" value="LAX5112_00959"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031071">
        <property type="term" value="F:cysteine desulfurase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000192">
        <property type="entry name" value="Aminotrans_V_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020578">
        <property type="entry name" value="Aminotrans_V_PyrdxlP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00266">
        <property type="entry name" value="Aminotran_5"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00595">
        <property type="entry name" value="AA_TRANSFER_CLASS_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Aminotran_5" evidence="5">
        <location>
            <begin position="26"/>
            <end position="388"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU004075"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU004504"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00266"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ66414.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="395" mass="42699" checksum="56E0835C23277B07" modified="2015-12-09" version="1">MIVPSLSQNEIDLMRDETPGVNRCIHFNNAGTGLAATPVLDAVKHHLDLEATIGGYEAAAAAQSETNAFYTSIAALIGSTPNEIAFIENATRAWDMAFYGIDFREGDRVITGRAEYVSNYVALLQMKKRKGIEIDLIEDDETGQIDLKALEAAITPKTRLIALTHIPTFSGLINPAEDVGQIAARHKLLYLLDACQSAGQIPLNIREIGCHMLSGTGRKYLRGPRGTGFLYVSDDALDQVEPPFVDLQATEWLDESTYRLVPHAQRFENWERYVAGQVGLGVATSYAIGFGMDRIGARICALGAQLRSELSGVPGITLHDNGARKGGIVTFAVEGATPAATKARLADHQINVSVSQASSARIDLPIRGLDAVVRASLHAFNTESELELMVKLLAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZY31</accession>
    <name>A0A0M6ZY31_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01258</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67191.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67191">
        <property type="protein sequence ID" value="CTQ67191"/>
        <property type="gene ID" value="LAX5112_01258"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67191.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="164" mass="17574" checksum="367433ED49AA9A3C" modified="2015-12-09" version="1">MSRKLSSDTYHRLSAVTRSAVEKAGGSTLVAEDLFGMQRQHVERYYAPFDSEGQTRSIPLHRIAELESSLVALGHPPFITRSLADLTGHDLMPRPGIFKDRNPVCAIGHLMKEAGAACETVTDAVADGIITPDEKHKCAEDLQKVIAAASAALGSLAGSDMESD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYC6</accession>
    <name>A0A0M6ZYC6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="12">Multiple resistance and pH homeostasis protein A</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">mrpA_2</name>
        <name evidence="12" type="ORF">LAX5112_01522</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1 7">Membrane</location>
            <topology evidence="1 7">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67795.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671323.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01522"/>
    <dbReference type="EnsemblBacteria" id="CTQ67795">
        <property type="protein sequence ID" value="CTQ67795"/>
        <property type="gene ID" value="LAX5112_01522"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.1200">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025383">
        <property type="entry name" value="MbhD-like_TM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001750">
        <property type="entry name" value="ND/Mrp_mem"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042106">
        <property type="entry name" value="Nuo/plastoQ_OxRdtase_6_NuoJ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001516">
        <property type="entry name" value="Proton_antipo_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13244">
        <property type="entry name" value="DUF4040"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00361">
        <property type="entry name" value="Proton_antipo_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00662">
        <property type="entry name" value="Proton_antipo_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="12"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="35"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="77"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="116"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="168"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="212"/>
            <end position="237"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="274"/>
            <end position="297"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="304"/>
            <end position="321"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="333"/>
            <end position="353"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="374"/>
            <end position="393"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="413"/>
            <end position="434"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="454"/>
            <end position="473"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="505"/>
            <end position="523"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="574"/>
            <end position="593"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="605"/>
            <end position="625"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="632"/>
            <end position="650"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="656"/>
            <end position="679"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="691"/>
            <end position="711"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="750"/>
            <end position="768"/>
        </location>
    </feature>
    <feature type="domain" description="Proton_antipo_N" evidence="10">
        <location>
            <begin position="70"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="domain" description="Proton_antipo_M" evidence="9">
        <location>
            <begin position="134"/>
            <end position="418"/>
        </location>
    </feature>
    <feature type="domain" description="DUF4040" evidence="11">
        <location>
            <begin position="615"/>
            <end position="677"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU000320"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF00361"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF00662"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF13244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ67795.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="794" mass="84424" checksum="62C0378C36C1242A" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYD7</accession>
    <name>A0A0M6ZYD7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Alpha-aminoadipate--LysW ligase LysX</fullName>
            <ecNumber evidence="3">6.3.2.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">lysX_2</name>
        <name evidence="3" type="ORF">LAX5112_01188</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="6.3.2.-" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67040.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671030.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01188"/>
    <dbReference type="EnsemblBacteria" id="CTQ67040">
        <property type="protein sequence ID" value="CTQ67040"/>
        <property type="gene ID" value="LAX5112_01188"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016874">
        <property type="term" value="F:ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011761">
        <property type="entry name" value="ATP-grasp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027592">
        <property type="entry name" value="ATP-grasp_GAK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013651">
        <property type="entry name" value="ATP-grasp_RimK-type"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08443">
        <property type="entry name" value="RimK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR04356">
        <property type="entry name" value="grasp_GAK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50975">
        <property type="entry name" value="ATP_GRASP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0436">Ligase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ATP-grasp" evidence="2">
        <location>
            <begin position="108"/>
            <end position="288"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00409"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ67040.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="293" mass="31310" checksum="2E2F352722824A57" modified="2015-12-09" version="1">MTDIKIGVVGIPGKWSTEALADVIEAKTGYRLVIDMAAVTLDLETGSVMYQGQDLCALDGLIIKKISEIYSPHALDRLELLRFAESRGVKIFSRPEAVLRLIDRLACTVSLRAAGAPMPATIVTEDLKAAEAAVERYGAAVFKPLYSTKARGMCIIEAGANARTEIAAFAEDHPVMYIQQKLNLSGQDLGMVFLGGDYLCTYARVSQSDSWNTTIHSGGKYAPFEPDAGLIELARQAQAPFGLDFTTVDVALTDEGPIVFEVSAFGGYRGAKEGCGVDAAAALADHVIAKVTQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYF9</accession>
    <name>A0A0M6ZYF9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01264</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67202.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67202">
        <property type="protein sequence ID" value="CTQ67202"/>
        <property type="gene ID" value="LAX5112_01264"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="22"/>
            <end position="42"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67202.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="45" mass="4803" checksum="8066A3BAA9E1EF78" modified="2015-12-09" version="1">MTGNPFIPGKRTTPEPDPFLKALRGALMVVAALFLVSLGAWFTGI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="31" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYK2</accession>
    <name>A0A0M6ZYK2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 4">Phosphate acyltransferase</fullName>
            <ecNumber evidence="3 4">2.3.1.274</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">Acyl-ACP phosphotransacylase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="4">Acyl-[acyl-carrier-protein]--phosphate acyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="4">Phosphate-acyl-ACP acyltransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="4 5" type="primary">plsX</name>
        <name evidence="5" type="ORF">LAX5112_01027</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 4">
            <text>a fatty acyl-[ACP] + phosphate = an acyl phosphate + holo-[ACP]</text>
            <dbReference type="Rhea" id="RHEA:42292"/>
            <dbReference type="Rhea" id="RHEA-COMP:9685"/>
            <dbReference type="Rhea" id="RHEA-COMP:14125"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:59918"/>
            <dbReference type="ChEBI" id="CHEBI:64479"/>
            <dbReference type="ChEBI" id="CHEBI:138651"/>
            <dbReference type="EC" id="2.3.1.274"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="4">Lipid metabolism; phospholipid metabolism.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Homodimer. Probably interacts with PlsY.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cytoplasm</location>
        </subcellularLocation>
        <text evidence="4">Associated with the membrane possibly through PlsY.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the PlsX family.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.274" evidence="3 4"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66603.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008195827.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01027"/>
    <dbReference type="EnsemblBacteria" id="CTQ66603">
        <property type="protein sequence ID" value="CTQ66603"/>
        <property type="gene ID" value="LAX5112_01027"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00085"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043811">
        <property type="term" value="F:phosphate:acyl-[acyl carrier protein] acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006633">
        <property type="term" value="P:fatty acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008654">
        <property type="term" value="P:phospholipid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00019">
        <property type="entry name" value="PlsX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003664">
        <property type="entry name" value="FA_synthesis"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012281">
        <property type="entry name" value="Phospholipid_synth_PlsX-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30100">
        <property type="entry name" value="PTHR30100"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02504">
        <property type="entry name" value="FA_synthesis"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002465">
        <property type="entry name" value="Phsphlp_syn_PlsX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00182">
        <property type="entry name" value="plsX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="2 4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="4" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="4" id="KW-0594">Phospholipid biosynthesis</keyword>
    <keyword evidence="4" id="KW-1208">Phospholipid metabolism</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001232"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00024069"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00019"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ66603.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="354" mass="37953" checksum="0ACB4A91F7AD6842" modified="2015-12-09" version="1">MAKTIPISLDVMGGDHGAEVVIPGAEIALVRHPDIRFLLYGNENVVRPLLDKYPRVRDASVFHHCEVAIAMDSKPSQALRQGRWKSSMWKSIEAVKTGDAAVSVSAGNTGALMAMSKFCLRTMANIERPAIAAIWPTLRGESVVLDVGATIGADAQQLIDFAILGGAMARALFGIQKPTVGLLNIGVEEVKGLEEVRTAGRLLRETPLRSLQYSGFVEGNDLGAGTVDVVVTEGFAGNIALKTAEGTAKQIGSYLRSSMNRTFMSKLGYLFAKGAFDLLREKMDPRKVNGGVFLGLNGIVIKSHGGTDAEGFASAIDLAYDMVKNELTHKIAQDLVHYHRGRFAEAAPTSEGDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYL4</accession>
    <name>A0A0M6ZYL4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Flagellar hook-length control protein FliK</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01297</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67262.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01297"/>
    <dbReference type="EnsemblBacteria" id="CTQ67262">
        <property type="protein sequence ID" value="CTQ67262"/>
        <property type="gene ID" value="LAX5112_01297"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021136">
        <property type="entry name" value="Flagellar_hook_control-like_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02120">
        <property type="entry name" value="Flg_hook"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0966">Cell projection</keyword>
    <keyword evidence="3" id="KW-0969">Cilium</keyword>
    <keyword evidence="3" id="KW-0282">Flagellum</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Flg_hook" evidence="2">
        <location>
            <begin position="244"/>
            <end position="312"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="84"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="140"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="147"/>
            <end position="168"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02120"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ67262.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="332" mass="34413" checksum="B96CCCA866B212AC" modified="2015-12-09" version="1">MATPGQPAIASQGARPAASTPVQQVAAALRQPLAEQQASLGNLFAQIGSLMSAQAAGKASVPDAVQKAMQQILGLRLNSGQPMTGQSLQQAVRLSGQSGEGRLPLPAGAQQSPVPDLKTALLAFRGLLQSLGAEPAVRFPARQPAPASRSSGPQGQAPQTSSGFWAGSAPQNLQSLLQETDAALARMRLTQLTNAGLAGDDGPQAAAAKPMDSVLELPLALGQDTAVMQMQIGRDGGGNSVDEDEEPAWRLRFALDLTATGPLEAAVSLRGGGTYISLWVDRKETLDLLSGLQETMEAAFADAGLDLQELRFIRGLPPKTAAKYGALINRQS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYT2</accession>
    <name>A0A0M6ZYT2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01263</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67200.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671098.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67200">
        <property type="protein sequence ID" value="CTQ67200"/>
        <property type="gene ID" value="LAX5112_01263"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67200.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="131" mass="14429" checksum="2F430D04E5315A59" modified="2015-12-09" version="1">MTATSFTPGPWSITDDFHNPNNIYQEKTYPLFRCMVTPQGDCYRGSAATLQSAEHIDGISVEETQANAHLIAASPEMYEALQEACTSLVIISDQVREAAHSDHKWSGVSEKLLRYAREGQAVLAKARGEAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZW0</accession>
    <name>A0A0M6ZZW0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Cystine transporter subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_01544</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67851.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671341.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01544"/>
    <dbReference type="EnsemblBacteria" id="CTQ67851">
        <property type="protein sequence ID" value="CTQ67851"/>
        <property type="gene ID" value="LAX5112_01544"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809369" evidence="2">
        <location>
            <begin position="22"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="domain" description="PBPb" evidence="3">
        <location>
            <begin position="30"/>
            <end position="204"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00497"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ67851.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="234" mass="25265" checksum="F2F3D6B2B7E000DE" modified="2015-12-09" version="1">MRLLLATATAAFLMSPLAAQAETVKLTTLEWPPYVMADASGSSSDAVKTAFEKAGITAEVAVFPWNRAINLAQKDPEWIGVYPEYYAEDSDAEKGGDRCLFSKSFGVSPVGFIQRKDSDFSWSSHDDLKAFSIGVVRGYNNEEKFDAMVAAGDIKAEEADDDAQNILKVAGGRTAAGVIDKLVFEHLAQNDPAVAKVAGDLKFNNNLLIEHGLFICFENSDAGKAARDKFNSAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A020</accession>
    <name>A0A0M7A020_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01567</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67911.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67911">
        <property type="protein sequence ID" value="CTQ67911"/>
        <property type="gene ID" value="LAX5112_01567"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67911.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="35" mass="3880" checksum="3B2FE6F4232BD8C6" modified="2015-12-09" version="1">MDKDAKRAVLFLAIKAAIFILLPAFIALVAVFYLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0T6</accession>
    <name>A0A0M7A0T6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Phage gp6-like head-tail connector protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01389</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67433.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671238.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01389"/>
    <dbReference type="EnsemblBacteria" id="CTQ67433">
        <property type="protein sequence ID" value="CTQ67433"/>
        <property type="gene ID" value="LAX5112_01389"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd08054">
        <property type="entry name" value="gp6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021146">
        <property type="entry name" value="Phafe_gp6_head-tail"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011738">
        <property type="entry name" value="Phage_CHP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05135">
        <property type="entry name" value="Phage_connect_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02215">
        <property type="entry name" value="phage_chp_gp8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67433.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="189" mass="20888" checksum="8980101CEE4D1647" modified="2015-12-09" version="1">MTSIRLNDPATEPVAVEEMRAHLRLNGSEEDSSLSGFLKAARTHIEQATRRALISQSWRLYLDGWPVGRIVRLPVSPVQSVDQITVYDRDGNAYQLGPSDWQLDRSAQPERVKIKLGAGLPATDMMAAEIDFTAGYGVSAADVPENFRQAVRLLAGHWFEHREAGTDLAITSLPQGLDRLLSTVRVPLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A114</accession>
    <name>A0A0M7A114_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="14">MlotiK1 channel</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">LAX5112_01640</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68112.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01640"/>
    <dbReference type="EnsemblBacteria" id="CTQ68112">
        <property type="protein sequence ID" value="CTQ68112"/>
        <property type="gene ID" value="LAX5112_01640"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008076">
        <property type="term" value="C:voltage-gated potassium channel complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005249">
        <property type="term" value="F:voltage-gated potassium channel activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00038">
        <property type="entry name" value="CAP_ED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018490">
        <property type="entry name" value="cNMP-bd-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000595">
        <property type="entry name" value="cNMP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005821">
        <property type="entry name" value="Ion_trans_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028325">
        <property type="entry name" value="VG_K_chnl"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11537">
        <property type="entry name" value="PTHR11537"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00027">
        <property type="entry name" value="cNMP_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00520">
        <property type="entry name" value="Ion_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00100">
        <property type="entry name" value="cNMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51206">
        <property type="entry name" value="SSF51206"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50042">
        <property type="entry name" value="CNMP_BINDING_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="10" id="KW-0407">Ion channel</keyword>
    <keyword evidence="8" id="KW-0406">Ion transport</keyword>
    <keyword evidence="9 12" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0630">Potassium</keyword>
    <keyword evidence="5" id="KW-0631">Potassium channel</keyword>
    <keyword evidence="3" id="KW-0633">Potassium transport</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 12" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="29"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="60"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="105"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="159"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="193"/>
            <end position="210"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="222"/>
            <end position="245"/>
        </location>
    </feature>
    <feature type="domain" description="Cyclic nucleotide-binding" evidence="13">
        <location>
            <begin position="266"/>
            <end position="380"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="398"/>
            <end position="424"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022538"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022826"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022958"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023303"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS50042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="CTQ68112.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="424" mass="46837" checksum="243C7D8C47CEFE0F" modified="2015-12-09" version="1">MPGHDFKRALYEVLEDTGKRRLAAQSLRNFLIFLIVANVVFAVLETVPEIRDTFGPHLRFLQLGSGVIFLIEYLLRLYVADLHPPMRRYGPVGARLRYALHPDAIVDLIGALPLVLVLVLPNQAVTMVVIFRLLRFLKLARYSPALRSLISAVAAERKALIGSSMIIFGVILMAATLMYLIEHNHQPEKFRSILHGIYWAITTVTTVGYGDVVPISNLGKMVGAVVMLMGYGLIALPVGIIASAFAREIHSRDFVVTWSMVARVPLFEDLSATEVASVSKLLQAFNVRKGATIAEAGDIADRMFFITSGEVEIRTEHGTVFLGEGNFFGELALLNQAVRRTTVVAYRDCQLLVLEAGALQQLMDQDAALAKKIMDEARERVEAGKKVLGEIAEEELEQAGIVPSDEDNNLQPELFEDGRPVKAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A138</accession>
    <name>A0A0M7A138_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative NADH-flavin reductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01786</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68559.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008196121.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01786"/>
    <dbReference type="EnsemblBacteria" id="CTQ68559">
        <property type="protein sequence ID" value="CTQ68559"/>
        <property type="gene ID" value="LAX5112_01786"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016040">
        <property type="entry name" value="NAD(P)-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13460">
        <property type="entry name" value="NAD_binding_10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NAD(P)-bd_dom" evidence="1">
        <location>
            <begin position="8"/>
            <end position="201"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13460"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68559.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="216" mass="22776" checksum="FBBE9191F30354E5" modified="2015-12-09" version="1">MANILVIGASRGIGKAVCLAAAEKGHAVRAMSRSGATPMGKTGAVEAIQGNALDRGDIDRALDGVDTVVLALGVPASLDMITGPVTLFSKATQVLLPAMESANIDRLIAVTGFGAGDSRSAINPLQRLPFKALLGRAYADKTTQEAMISESGLDYLIVRPGVLTNQPRSGRYKVLEDPKKWRNGVIARADVADFIAGRLTDETLGCKKPVLIRWPL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2L6</accession>
    <name>A0A0M7A2L6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Glutathione hydrolase proenzyme</fullName>
            <ecNumber evidence="4">2.3.2.2</ecNumber>
            <ecNumber evidence="4">3.4.19.13</ecNumber>
        </recommendedName>
        <component>
            <recommendedName>
                <fullName evidence="4">Glutathione hydrolase large chain</fullName>
            </recommendedName>
        </component>
        <component>
            <recommendedName>
                <fullName evidence="4">Glutathione hydrolase small chain</fullName>
            </recommendedName>
        </component>
    </protein>
    <gene>
        <name evidence="5" type="primary">ywrD</name>
        <name evidence="5" type="ORF">LAX5112_02060</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="2 4">
            <text>an S-substituted glutathione + H2O = an S-substituted L-cysteinylglycine + L-glutamate</text>
            <dbReference type="Rhea" id="RHEA:59468"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:90779"/>
            <dbReference type="ChEBI" id="CHEBI:143103"/>
            <dbReference type="EC" id="3.4.19.13"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 4">
            <text>an alpha-amino acid + an N-terminal (5-L-glutamyl)-[peptide] = 5-L-glutamyl amino acid + N-terminal L-alpha-aminoacyl-[peptide]</text>
            <dbReference type="Rhea" id="RHEA:23904"/>
            <dbReference type="Rhea" id="RHEA-COMP:9780"/>
            <dbReference type="Rhea" id="RHEA-COMP:9795"/>
            <dbReference type="ChEBI" id="CHEBI:77644"/>
            <dbReference type="ChEBI" id="CHEBI:78597"/>
            <dbReference type="ChEBI" id="CHEBI:78599"/>
            <dbReference type="ChEBI" id="CHEBI:78608"/>
            <dbReference type="EC" id="2.3.2.2"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3 4">
            <text>glutathione + H2O = L-cysteinylglycine + L-glutamate</text>
            <dbReference type="Rhea" id="RHEA:28807"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:57925"/>
            <dbReference type="ChEBI" id="CHEBI:61694"/>
            <dbReference type="EC" id="3.4.19.13"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="4">Sulfur metabolism; glutathione metabolism.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">This enzyme consists of two polypeptide chains, which are synthesized in precursor form from a single polypeptide.</text>
    </comment>
    <comment type="PTM">
        <text evidence="4">Cleaved by autocatalysis into a large and a small subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the gamma-glutamyltransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.3.2.2" evidence="4"/>
    <dbReference type="EC" id="3.4.19.13" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69295.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671739.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02060"/>
    <dbReference type="EnsemblBacteria" id="CTQ69295">
        <property type="protein sequence ID" value="CTQ69295"/>
        <property type="gene ID" value="LAX5112_02060"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00204"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0036374">
        <property type="term" value="F:glutathione hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102953">
        <property type="term" value="F:hypoglycin A gamma-glutamyl transpeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0103068">
        <property type="term" value="F:leukotriene C4 gamma-glutamyl transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006750">
        <property type="term" value="P:glutathione biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006751">
        <property type="term" value="P:glutathione catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.246.130">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.20.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043138">
        <property type="entry name" value="GGT_lsub_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000101">
        <property type="entry name" value="GGT_peptidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043137">
        <property type="entry name" value="GGT_ssub"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029055">
        <property type="entry name" value="Ntn_hydrolases_N"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56235">
        <property type="entry name" value="SSF56235"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00066">
        <property type="entry name" value="g_glut_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="4" id="KW-0317">Glutathione biosynthesis</keyword>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0808">Transferase</keyword>
    <keyword evidence="4" id="KW-0865">Zymogen</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000250"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00001089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU368036"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ69295.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="531" mass="56154" checksum="225A9ACB4CE148D5" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2M8</accession>
    <name>A0A0M7A2M8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Pirin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">LAX5112_01902</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the pirin family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68831.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671596.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ68831">
        <property type="protein sequence ID" value="CTQ68831"/>
        <property type="gene ID" value="LAX5112_01902"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012093">
        <property type="entry name" value="Pirin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008778">
        <property type="entry name" value="Pirin_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003829">
        <property type="entry name" value="Pirin_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13903">
        <property type="entry name" value="PTHR13903"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02678">
        <property type="entry name" value="Pirin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05726">
        <property type="entry name" value="Pirin_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006232">
        <property type="entry name" value="Pirin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Pirin" evidence="3">
        <location>
            <begin position="34"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="domain" description="Pirin_C" evidence="4">
        <location>
            <begin position="192"/>
            <end position="292"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008416"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU003457"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF02678"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF05726"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ68831.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="311" mass="34320" checksum="7F7E007CBF05912E" modified="2015-12-09" version="1">MSWLNCPDPTPGDAASCDPIETIIVPRTSDLGGFSVRRALPSAKRRMIGPFIFFDQMGPAELLVGGGIDVRPHPHIGLATVTYLFEGEMYHRDSLGTEIAIAPGALNWMSSGKGIVHSERERPERLNEKRPLFGLQSWVALPKNLEETDPTFQHHGTDEQPEFSDQGASVKLIAGSLYGHTAPVKTASDMFYADIQLEPGAKVPLDAGWEERGIYTISGQITIAGQTFDPAQLMVVKPGDHLVIENTSPAPARFVVMGGEPMDGERYIWWNFVSSSKERIEQAKEDWRQGRFDIVPGDEEEFIPLPDRPGP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A376</accession>
    <name>A0A0M7A376_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Inner membrane protein YiaV</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">yiaV_1</name>
        <name evidence="5" type="ORF">LAX5112_01975</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ69021.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671651.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01975"/>
    <dbReference type="EnsemblBacteria" id="CTQ69021">
        <property type="protein sequence ID" value="CTQ69021"/>
        <property type="gene ID" value="LAX5112_01975"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039562">
        <property type="entry name" value="MFP_biotin_lipoyl_2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13533">
        <property type="entry name" value="Biotin_lipoyl_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="34"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="domain" description="Biotin_lipoyl_2" evidence="4">
        <location>
            <begin position="64"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="156"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="97"/>
            <end position="152"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF13533"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ69021.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="404" mass="43652" checksum="FE2072320823DE9B" modified="2015-12-09" version="1">MIELLVTSFPFVLRVMYLRWKGLPITLYNVHRALFLWFILALIVFFAVFYYYPKSYTGIVPFRTVPVVAETGGTVTEVFVKGGDHVTVGEPLFSIENASELAKVELAERNIDEINAAIVAAHLEVDTAEAALDAAEAALKQAEITVADHQELKQRNSAAYQPSQFERAQSQRDTRSAEVDAATSKLSAAKVQAEAIIPAQLESAKASLKQAQLELERTRVLSFVDGTVEQLALNVGARATPAAMSPAMVIVPDRTASQSGRIVAGFSQVSRREIYEGMAAEIACESNFNIAMNNTVLPARITRIQIPISVGQMTPSGRLMEPTERAKRGQIVAHLDLVYPEHQELLVPGSGCIVQAYTTHLKGPLEGSVTAHVIEALGIIKAVGIRIKAWLGLAAGIGLAGSGH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3C5</accession>
    <name>A0A0M7A3C5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Soluble pyridine nucleotide transhydrogenase</fullName>
            <ecNumber evidence="5">1.6.1.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">sthA</name>
        <name evidence="5" type="ORF">LAX5112_01895</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
        <text evidence="2">Binds 1 FAD per subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.</text>
    </comment>
    <dbReference type="EC" id="1.6.1.1" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68810.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671591.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01895"/>
    <dbReference type="EnsemblBacteria" id="CTQ68810">
        <property type="protein sequence ID" value="CTQ68810"/>
        <property type="gene ID" value="LAX5112_01895"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003957">
        <property type="term" value="F:NAD(P)+ transhydrogenase (B-specific) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045454">
        <property type="term" value="P:cell redox homeostasis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.390.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023753">
        <property type="entry name" value="FAD/NAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016156">
        <property type="entry name" value="FAD/NAD-linked_Rdtase_dimer_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001100">
        <property type="entry name" value="Pyr_nuc-diS_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004099">
        <property type="entry name" value="Pyr_nucl-diS_OxRdtase_dimer"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07992">
        <property type="entry name" value="Pyr_redox_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02852">
        <property type="entry name" value="Pyr_redox_dim"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000350">
        <property type="entry name" value="Mercury_reductase_MerA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55424">
        <property type="entry name" value="SSF55424"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0274">FAD</keyword>
    <keyword evidence="2" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="2" id="KW-0520">NAD</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Pyr_redox_2" evidence="4">
        <location>
            <begin position="4"/>
            <end position="326"/>
        </location>
    </feature>
    <feature type="domain" description="Pyr_redox_dim" evidence="3">
        <location>
            <begin position="346"/>
            <end position="453"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="51"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <begin position="181"/>
            <end position="188"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="204"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="269"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="311"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007532"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR000350-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF02852"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF07992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ68810.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="466" mass="51482" checksum="562E3F35B4DF943F" modified="2015-12-09" version="1">MEHFDLIVIGSGPAGRRAAIQAAKFGYEVLVVERGRRVGGVSVHTGTIPSKTLRETVLNLTGWRERGFYGRSYRVKQDISAGDLRARLHMTLDHEVEVLELQFARNKVSTVYGEARFVSPEKIEVKSEEGDVKLFSADKFILAVGTKPFRPDYVPFDGEFILDSDEILELNQLPRSIAVIGAGVIGVEYASIFSALDVAVTLVEPRDTMLDFLDHELVSDFTHQLRDRGIAMRFGSKVKSIEKHGPGECEIFLEGGRSVRSNVILFAAGRMGATPSLNLEACGLEVDHRGRLKVDPVTFQTSVPYIYAAGDVIGFPSLASTSMEQGRIAACQALGEKAYDPPEYFPYGIYAVPEISTVGMTEEEIRERGIPYECGIARFRETSRGQIMGLDTGMLKMIFSLKTRRLLGCHIVGEGATELVHIGQAVLNLKGTLEYFVENTFNYPTLAEAYKIAALDAWNRMGPLKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A447</accession>
    <name>A0A0M7A447_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Long-chain-fatty-acid--CoA ligase</fullName>
            <ecNumber evidence="4">6.2.1.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_02099</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="6.2.1.3" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69397.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671764.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02099"/>
    <dbReference type="EnsemblBacteria" id="CTQ69397">
        <property type="protein sequence ID" value="CTQ69397"/>
        <property type="gene ID" value="LAX5112_02099"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004467">
        <property type="term" value="F:long-chain fatty acid-CoA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12780">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025110">
        <property type="entry name" value="AMP-bd_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045851">
        <property type="entry name" value="AMP-bd_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020845">
        <property type="entry name" value="AMP-binding_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000873">
        <property type="entry name" value="AMP-dep_Synth/Lig"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042099">
        <property type="entry name" value="ANL_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00501">
        <property type="entry name" value="AMP-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13193">
        <property type="entry name" value="AMP-binding_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00455">
        <property type="entry name" value="AMP_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0007">Acetylation</keyword>
    <keyword evidence="4" id="KW-0436">Ligase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AMP-binding" evidence="2">
        <location>
            <begin position="24"/>
            <end position="443"/>
        </location>
    </feature>
    <feature type="domain" description="AMP-binding_C" evidence="3">
        <location>
            <begin position="452"/>
            <end position="526"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022990"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF13193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ69397.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="544" mass="59629" checksum="FB569327AE22AD28" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4Q5</accession>
    <name>A0A0M7A4Q5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative HTH-type transcriptional regulator YybR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yybR</name>
        <name evidence="2" type="ORF">LAX5112_01854</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68703.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ68703">
        <property type="protein sequence ID" value="CTQ68703"/>
        <property type="gene ID" value="LAX5112_01854"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002577">
        <property type="entry name" value="HTH_HxlR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01638">
        <property type="entry name" value="HxlR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51118">
        <property type="entry name" value="HTH_HXLR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH hxlR-type" evidence="1">
        <location>
            <begin position="31"/>
            <end position="129"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51118"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68703.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="142" mass="15729" checksum="9714CB6E41D546AA" modified="2015-12-09" version="1">MGSDMKVTFDPVTTILREIDRSQETSGEAPCPVRDVLDRTGDKWSVQVLLRLAPKPERFNALLRSVSGISQRMLTVTLKGLERDGLVERTVFDTRPPSVEYTLTPLGASLIEHLAALANWAIKNEPQISKNRAAYDNEAPAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A507</accession>
    <name>A0A0M7A507_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Hydroxyacylglutathione hydrolase</fullName>
            <ecNumber evidence="5">3.1.2.6</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Glyoxalase II</fullName>
            <shortName evidence="5">Glx II</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5 7" type="primary">gloB</name>
        <name evidence="7" type="ORF">LAX5112_02077</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl-glutathione to form glutathione and D-lactic acid.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>an S-(2-hydroxyacyl)glutathione + H2O = a 2-hydroxy carboxylate + glutathione + H(+)</text>
            <dbReference type="Rhea" id="RHEA:21864"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57925"/>
            <dbReference type="ChEBI" id="CHEBI:58896"/>
            <dbReference type="ChEBI" id="CHEBI:71261"/>
            <dbReference type="EC" id="3.1.2.6"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="5">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="5">Binds 2 Zn(2+) ions per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="5">Secondary metabolite metabolism; methylglyoxal degradation; (R)-lactate from methylglyoxal: step 2/2.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Monomer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family.</text>
    </comment>
    <dbReference type="EC" id="3.1.2.6" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69340.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671911.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02077"/>
    <dbReference type="EnsemblBacteria" id="CTQ69340">
        <property type="protein sequence ID" value="CTQ69340"/>
        <property type="gene ID" value="LAX5112_02077"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00619">
        <property type="reaction ID" value="UER00676"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004416">
        <property type="term" value="F:hydroxyacylglutathione hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019243">
        <property type="term" value="P:methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07723">
        <property type="entry name" value="hydroxyacylglutathione_hydrolase_MBL-fold"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.15.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01374">
        <property type="entry name" value="Glyoxalase_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035680">
        <property type="entry name" value="Clx_II_MBL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032282">
        <property type="entry name" value="HAGH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017782">
        <property type="entry name" value="Hydroxyacylglutathione_Hdrlase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001279">
        <property type="entry name" value="Metallo-B-lactamas"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036866">
        <property type="entry name" value="RibonucZ/Hydroxyglut_hydro"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16123">
        <property type="entry name" value="HAGH_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00753">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005457">
        <property type="entry name" value="Glx"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00849">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56281">
        <property type="entry name" value="SSF56281"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03413">
        <property type="entry name" value="GSH_gloB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5 7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Lactamase_B" evidence="6">
        <location>
            <begin position="17"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="60"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="62"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="64"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="65"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="118"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="137"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="176"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>2</label>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006759"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01374"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM00849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ69340.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="260" mass="28216" checksum="52E99C63B8838A39" modified="2015-12-09" version="1">MSLSDTTEIHQFACLDDNFGVLIHDRESGTTVAVDVPDAAAYEAALAETGWKLSHILITHHHWDHVQGLGELKTKTGAVVIGPERSRQKISELDRTVEDGDDVLCGPYEVKAIATPGHTLDQISWYIPSIRVAHTGDTLFALGCGRVFEGDKEMMWASLSHLMHRLPDDTTIYCGHEYTEANAKFAVTIEPGNEALQARAKEIADIRALGKPTLPTTMAAEKATNPFLRAGEASVADALGMAGQPAEAVFAEIRTRKDNA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A537</accession>
    <name>A0A0M7A537_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Iron-regulated protein A</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">irpA</name>
        <name evidence="4" type="ORF">LAX5112_02175</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69592.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671819.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02175"/>
    <dbReference type="EnsemblBacteria" id="CTQ69592">
        <property type="protein sequence ID" value="CTQ69592"/>
        <property type="gene ID" value="LAX5112_02175"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1420.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018976">
        <property type="entry name" value="Imelysin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038352">
        <property type="entry name" value="Imelysin_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09375">
        <property type="entry name" value="Peptidase_M75"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809097" evidence="2">
        <location>
            <begin position="22"/>
            <end position="420"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_M75" evidence="3">
        <location>
            <begin position="35"/>
            <end position="391"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF09375"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ69592.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="420" mass="44606" checksum="08D8AA543A2E6344" modified="2015-12-09" version="1">MKSFTRALLAATTLLATPAMAAAPADVLGTYSDIAYAKYSDSLETAKTLQSAIDKLIAEPTDTNLAAARKAWIEARNPYQQTEAYRFGNAIVDDWEGKVNAWPLDEGLIDYVDVSYGEDSEENAFYAANVIANPSLKVGGETIDASVITPALLAESLQEAGEVEANVATGYHAIEFLLWGQDLNGTDAGAGNRPASDFDTANCTGGNCERRAQYLKAATDLLITDLEEMVAAWAPGGAAREELGGKGEAGGLATILTGMGSLSYGELAGERMKLGLMLHDPEEEHDCFSDNTHMSHYNDVVGIRNVYFGEYKSPLGNDVKGASLAEMVAAKDPALAEEMQAKLDATLAAFEAMKARAEAGEAYDQMIGEGNDEGNAVVQAAVNALVDQTTSIERVVKVLELDEIAFEGSDSLDNPSAVFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A632</accession>
    <name>A0A0M7A632_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Fluoroacetate dehalogenase</fullName>
            <ecNumber evidence="2">3.8.1.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02339</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.8.1.3" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70061.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671963.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02339"/>
    <dbReference type="EnsemblBacteria" id="CTQ70061">
        <property type="protein sequence ID" value="CTQ70061"/>
        <property type="gene ID" value="LAX5112_02339"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018785">
        <property type="term" value="F:haloacetate dehalogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000073">
        <property type="entry name" value="AB_hydrolase_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000639">
        <property type="entry name" value="Epox_hydrolase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00561">
        <property type="entry name" value="Abhydrolase_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00111">
        <property type="entry name" value="ABHYDROLASE"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00412">
        <property type="entry name" value="EPOXHYDRLASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AB hydrolase-1" evidence="1">
        <location>
            <begin position="33"/>
            <end position="286"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00561"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70061.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="301" mass="33477" checksum="498CBE1E0D3E339E" modified="2015-12-09" version="1">MVETLPDLFPGFESHFVETAQGPIFCRTGGTGPALLLVHGYPQSHVIWHKIAAGLAKSFTLVMPDLPGYGQSVIPPLSADHAAYSKRTMAQTMVEVMSHLGHEQFGAVGHDRGGRVVYRMALDMPDRISSAAVLDILPTFDYWNHLDRTFALKIYHWAFLAQPAPFPENMIAADPIPFLEHKLASWSAAKDLSPFSEGALQHTRAWFSDPVRIAASCEDYRAGAHIDYDHDAEDRRANRTINPPFLALWGEQGIAASIEDPLAIWQRWCPHAKGKAIKGGHFLPEESPKEITQEILEFFSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6X0</accession>
    <name>A0A0M7A6X0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Thiol-disulfide oxidoreductase D</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">bdbD_1</name>
        <name evidence="5" type="ORF">LAX5112_02407</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">May be required for disulfide bond formation in some proteins.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the thioredoxin family. DsbA subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70202.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672021.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02407"/>
    <dbReference type="EnsemblBacteria" id="CTQ70202">
        <property type="protein sequence ID" value="CTQ70202"/>
        <property type="gene ID" value="LAX5112_02407"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006311">
        <property type="entry name" value="TAT_signal"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019546">
        <property type="entry name" value="TAT_signal_bac_arc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012336">
        <property type="entry name" value="Thioredoxin-like_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013766">
        <property type="entry name" value="Thioredoxin_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10518">
        <property type="entry name" value="TAT_signal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13462">
        <property type="entry name" value="Thioredoxin_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01409">
        <property type="entry name" value="TAT_signal_seq"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51352">
        <property type="entry name" value="THIOREDOXIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809488" evidence="3">
        <location>
            <begin position="30"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="domain" description="Thioredoxin" evidence="4">
        <location>
            <begin position="19"/>
            <end position="211"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003565"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005791"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ70202.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="211" mass="23528" checksum="9B08884BAE31FEC3" modified="2015-12-09" version="1">MTQTRRQFLKTTALTTAALGLASAAPAWAQSVDEAELLKPGPLGDKILGDENAPVTIVEYASMTCGHCANFHERTWPDLKKDYIETGKVRFIFREFPLDPVASAAFMLARCAPQEKYFDIVDIMFEEQRAWAFTDNPYQSLLDFSKQIGFTQESFEECLTNQGLLDAVNAVRERGANEFGVNSTPTFFINGEKHSGALSIDEMGKIIEENL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6X3</accession>
    <name>A0A0M7A6X3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">RHH_4 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02644</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70895.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008192966.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70895">
        <property type="protein sequence ID" value="CTQ70895"/>
        <property type="gene ID" value="LAX5112_02644"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3990.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027373">
        <property type="entry name" value="RHH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038268">
        <property type="entry name" value="RHH_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13467">
        <property type="entry name" value="RHH_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RHH_4" evidence="1">
        <location>
            <begin position="16"/>
            <end position="82"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13467"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70895.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="116" mass="12977" checksum="E6928C1BD811814B" modified="2015-12-09" version="1">MCKLFIDADVNLWQSTTKSLRIDGMVTSVRLETFFWNVLDEIAARDGMNVVQLITKLHHESIDAGHDLGNFTSFLRVCCGRYMALQLAGDVPTDTRVPIAGLDADGILEAEERRVH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A766</accession>
    <name>A0A0M7A766_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">N-substituted formamide deformylase</fullName>
            <ecNumber evidence="2">3.5.1.91</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">nfdA</name>
        <name evidence="2" type="ORF">LAX5112_02127</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.5.1.91" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69474.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671785.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02127"/>
    <dbReference type="EnsemblBacteria" id="CTQ69474">
        <property type="protein sequence ID" value="CTQ69474"/>
        <property type="gene ID" value="LAX5112_02127"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016810">
        <property type="term" value="F:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01300">
        <property type="entry name" value="YtcJ_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013108">
        <property type="entry name" value="Amidohydro_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011059">
        <property type="entry name" value="Metal-dep_hydrolase_composite"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032466">
        <property type="entry name" value="Metal_Hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033932">
        <property type="entry name" value="YtcJ-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07969">
        <property type="entry name" value="Amidohydro_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51338">
        <property type="entry name" value="SSF51338"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51556">
        <property type="entry name" value="SSF51556"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Amidohydro_3" evidence="1">
        <location>
            <begin position="49"/>
            <end position="534"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07969"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69474.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="578" mass="64069" checksum="EB678A224690D176" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7S7</accession>
    <name>A0A0M7A7S7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02247</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69783.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671875.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02247"/>
    <dbReference type="EnsemblBacteria" id="CTQ69783">
        <property type="protein sequence ID" value="CTQ69783"/>
        <property type="gene ID" value="LAX5112_02247"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010323">
        <property type="entry name" value="DUF924"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06041">
        <property type="entry name" value="DUF924"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="SSF48452"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ69783.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="183" mass="20405" checksum="538F8C0BC08CFC6A" modified="2015-12-09" version="1">MSDGLVSPIDVLDFWWEAGAEKWFARDDGFDARCRDTFLATIKAAQQGGLDEWAETPSGALALILLLDQFTRNVFRGSAEAFAADSKAVAIAEAAVARGYDKAFPKSVRVFFYLPFEHAEDMSLQERAVDLCQPLGNMEFYHYALIHMDVIRRFGRFPHRNDVLGRASTEAEIAFLRAGGFSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8E1</accession>
    <name>A0A0M7A8E1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">3-deoxy-manno-octulosonate cytidylyltransferase</fullName>
            <ecNumber evidence="2">2.7.7.38</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">kdsB</name>
        <name evidence="2" type="ORF">LAX5112_02814</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.7.7.38" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71415.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02814"/>
    <dbReference type="EnsemblBacteria" id="CTQ71415">
        <property type="protein sequence ID" value="CTQ71415"/>
        <property type="gene ID" value="LAX5112_02814"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008690">
        <property type="term" value="F:3-deoxy-manno-octulosonate cytidylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009103">
        <property type="term" value="P:lipopolysaccharide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd02517">
        <property type="entry name" value="CMP-KDO-Synthetase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003329">
        <property type="entry name" value="Cytidylyl_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004528">
        <property type="entry name" value="KdsB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02348">
        <property type="entry name" value="CTP_transf_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0448">Lipopolysaccharide biosynthesis</keyword>
    <keyword evidence="2" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022985"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71415.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="215" mass="23468" checksum="FD24AF3E4FC21D5F" modified="2015-12-09" version="1">MIVRVLEQALNADIGPVAIATDDASIAEAVRDHGGTAVMTRDDHASGSDRIFEAAQTLDPDQKYDTVLNVQGDVPLIEPEAIRAAFAPLSIPGVDIGTIMTEIRDARFRDDPNFVKAVTTPNGHGHNRALYFTRATAPVGDGPLYQHIGIYAYRRAVLARFVSLSPSPLEKREKLEQLRALEAGMRIDVSEIASAPMDVNTPEDLERARTAYQSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8H4</accession>
    <name>A0A0M7A8H4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Phosphate regulon transcriptional regulatory protein PhoB</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">phoB</name>
        <name evidence="10" type="ORF">LAX5112_02541</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">This protein is a positive regulator for the phosphate regulon. Transcription of this operon is positively regulated by PhoB and PhoR when phosphate is limited.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70530.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451610.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02541"/>
    <dbReference type="EnsemblBacteria" id="CTQ70530">
        <property type="protein sequence ID" value="CTQ70530"/>
        <property type="gene ID" value="LAX5112_02541"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000156">
        <property type="term" value="F:phosphorelay response regulator activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006817">
        <property type="term" value="P:phosphate ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00383">
        <property type="entry name" value="trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001867">
        <property type="entry name" value="OmpR/PhoB-type_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016032">
        <property type="entry name" value="Sig_transdc_resp-reg_C-effctor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011879">
        <property type="entry name" value="Sig_transdc_resp-reg_PhoB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039420">
        <property type="entry name" value="WalR-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48111">
        <property type="entry name" value="PTHR48111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00486">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00862">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46894">
        <property type="entry name" value="SSF46894"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02154">
        <property type="entry name" value="PhoB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51755">
        <property type="entry name" value="OMPR_PHOB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 7" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="3" id="KW-0592">Phosphate transport</keyword>
    <keyword evidence="6" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="domain" description="Response regulatory" evidence="8">
        <location>
            <begin position="3"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="domain" description="OmpR/PhoB-type" evidence="9">
        <location>
            <begin position="128"/>
            <end position="226"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="OmpR/PhoB-type" evidence="7">
        <location>
            <begin position="128"/>
            <end position="226"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="6">
        <location>
            <position position="52"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00013332"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022592"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00024735"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ70530.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="231" mass="26293" checksum="C45E9A7D96D96F48" modified="2015-12-09" version="1">MPKVLIVEDEEPLSLLLRYNLEAEGYAVETCVRGDEAEIRLRETQPDLLLLDWMLPGLSGIELCRRLRAREDTERLPVIMLTARGEEAERIRGLSTGADDYVVKPFSVPELMARVRAILRRASPEVVSTMLRSGDIELDRETHRVRRSTKEIHLGPTEFRLLEFLMTAPGRVFSREQLLDGVWGHDVYVDERTVDVHVGRLRKALNKGKAKDPIRTVRGAGYAFNDQFTAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8I5</accession>
    <name>A0A0M7A8I5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Cytochrome c2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">LAX5112_02815</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71418.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008189097.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02815"/>
    <dbReference type="EnsemblBacteria" id="CTQ71418">
        <property type="protein sequence ID" value="CTQ71418"/>
        <property type="gene ID" value="LAX5112_02815"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.760.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009056">
        <property type="entry name" value="Cyt_c-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036909">
        <property type="entry name" value="Cyt_c-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002327">
        <property type="entry name" value="Cyt_c_1A/1B"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11961">
        <property type="entry name" value="PTHR11961"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00034">
        <property type="entry name" value="Cytochrom_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00604">
        <property type="entry name" value="CYTCHRMECIAB"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46626">
        <property type="entry name" value="SSF46626"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51007">
        <property type="entry name" value="CYTC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 5" id="KW-0349">Heme</keyword>
    <keyword evidence="4 5" id="KW-0408">Iron</keyword>
    <keyword evidence="6" id="KW-0472">Membrane</keyword>
    <keyword evidence="3 5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="domain" description="Cytochrome c" evidence="7">
        <location>
            <begin position="71"/>
            <end position="174"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00433"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ71418.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="183" mass="19228" checksum="94E439C1B330EC4E" modified="2015-12-09" version="1">MDSFTLNKAAGAVLMVLILTMGLGIVSDIIFKPTIPGKPGYEIVVAAAEDSTSEVTPEPDVVPIGELLMAAAASDGESAAKKCAACHTFEQGGANKVGPNLWEIVGRKPGGVDGVNYSSAMAAYGEENPEWTYEGLYNFLAAPKKYIPGTSMGFAGIRKSEERADLIAYMREQAATPKPLPGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8R6</accession>
    <name>A0A0M7A8R6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Phosphogluconate dehydratase</fullName>
            <ecNumber evidence="6">4.2.1.12</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6 7" type="primary">edd</name>
        <name evidence="7" type="ORF">LAX5112_02686</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Catalyzes the dehydration of 6-phospho-D-gluconate to 2-dehydro-3-deoxy-6-phospho-D-gluconate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>6-phospho-D-gluconate = 2-dehydro-3-deoxy-6-phospho-D-gluconate + H2O</text>
            <dbReference type="Rhea" id="RHEA:17277"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:57569"/>
            <dbReference type="ChEBI" id="CHEBI:58759"/>
            <dbReference type="EC" id="4.2.1.12"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
        <text evidence="6">Binds 1 [4Fe-4S] cluster.</text>
    </comment>
    <comment type="pathway">
        <text evidence="6">Carbohydrate metabolism; Entner-Doudoroff pathway.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the IlvD/Edd family.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.12" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71011.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672246.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02686"/>
    <dbReference type="EnsemblBacteria" id="CTQ71011">
        <property type="protein sequence ID" value="CTQ71011"/>
        <property type="gene ID" value="LAX5112_02686"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00226"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004456">
        <property type="term" value="F:phosphogluconate dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046177">
        <property type="term" value="P:D-gluconate catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009255">
        <property type="term" value="P:Entner-Doudoroff pathway through 6-phosphogluconate"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.30.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02094">
        <property type="entry name" value="Edd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004786">
        <property type="entry name" value="6-phosphgluc_deHydtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042096">
        <property type="entry name" value="Dihydro-acid_dehy_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000581">
        <property type="entry name" value="DiOHA_6PGluconate_deHydtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020558">
        <property type="entry name" value="DiOHA_6PGluconate_deHydtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037237">
        <property type="entry name" value="IlvD/EDD_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43661:SF1">
        <property type="entry name" value="PTHR43661:SF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00920">
        <property type="entry name" value="ILVD_EDD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF143975">
        <property type="entry name" value="SSF143975"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01196">
        <property type="entry name" value="edd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00886">
        <property type="entry name" value="ILVD_EDD_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00887">
        <property type="entry name" value="ILVD_EDD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 6" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="5 6" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="3 6" id="KW-0311">Gluconate utilization</keyword>
    <keyword evidence="6" id="KW-0408">Iron</keyword>
    <keyword evidence="6" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="4 6 7" id="KW-0456">Lyase</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="binding site" evidence="6">
        <location>
            <position position="156"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="223"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006486"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023064"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02094"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ71011.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="606" mass="63599" checksum="141F5BF056496BE1" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A923</accession>
    <name>A0A0M7A923_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ABC-type uncharacterized transport system, auxiliary component</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02723</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71117.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02723"/>
    <dbReference type="EnsemblBacteria" id="CTQ71117">
        <property type="protein sequence ID" value="CTQ71117"/>
        <property type="gene ID" value="LAX5112_02723"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005586">
        <property type="entry name" value="ABC_trans_aux"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006311">
        <property type="entry name" value="TAT_signal"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03886">
        <property type="entry name" value="ABC_trans_aux"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC_trans_aux" evidence="1">
        <location>
            <begin position="45"/>
            <end position="204"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03886"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71117.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="211" mass="22356" checksum="C1741226887F7566" modified="2015-12-09" version="1">MSKGNRGLTGMTQADSRLSRRAFISALGAGAVVSGCASSGPAAFYSLQAADVGGLSGRSSRVQVLVAPPRALKALDTTYIAVVDSGPVYSYFPNVAWADTLPNVVQNKLLQTLQNTGRLRGVGLPGDGLLIDYQLQTDIRSFELNIEGANRGVVEIAARVVNDRNGRTVANNVFRRETPSGSSDVEKAVEAMNQSAEQVFADIAAWTLRNV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A952</accession>
    <name>A0A0M7A952_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Acetolactate synthase small subunit</fullName>
            <shortName evidence="8">AHAS</shortName>
            <shortName evidence="8">ALS</shortName>
            <ecNumber evidence="8">2.2.1.6</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">Acetohydroxy-acid synthase small subunit</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="10" type="primary">ilvH</name>
        <name evidence="10" type="ORF">LAX5112_02659</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Catalyzes the conversion of 2 pyruvate molecules into acetolactate in the first common step of the biosynthetic pathway of the branched-amino acids such as leucine, isoleucine, and valine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 8">
            <text>H(+) + 2 pyruvate = (2S)-2-acetolactate + CO2</text>
            <dbReference type="Rhea" id="RHEA:25249"/>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:58476"/>
            <dbReference type="EC" id="2.2.1.6"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 8">Amino-acid biosynthesis; L-isoleucine biosynthesis; L-isoleucine from 2-oxobutanoate: step 1/4.</text>
    </comment>
    <comment type="pathway">
        <text evidence="3 8">Amino-acid biosynthesis; L-valine biosynthesis; L-valine from pyruvate: step 1/4.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5 8">Dimer of large and small chains.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4 8">Belongs to the acetolactate synthase small subunit family.</text>
    </comment>
    <dbReference type="EC" id="2.2.1.6" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70936.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008189543.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02659"/>
    <dbReference type="EnsemblBacteria" id="CTQ70936">
        <property type="protein sequence ID" value="CTQ70936"/>
        <property type="gene ID" value="LAX5112_02659"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00047">
        <property type="reaction ID" value="UER00055"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00049">
        <property type="reaction ID" value="UER00059"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003984">
        <property type="term" value="F:acetolactate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990610">
        <property type="term" value="F:acetolactate synthase regulator activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009097">
        <property type="term" value="P:isoleucine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009099">
        <property type="term" value="P:valine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd04878">
        <property type="entry name" value="ACT_AHAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004789">
        <property type="entry name" value="Acetalactate_synth_ssu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027271">
        <property type="entry name" value="Acetolactate_synth/TF_NikR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019455">
        <property type="entry name" value="Acetolactate_synth_ssu_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045865">
        <property type="entry name" value="ACT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002912">
        <property type="entry name" value="ACT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039557">
        <property type="entry name" value="AHAS_ACT"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30239">
        <property type="entry name" value="PTHR30239"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10369">
        <property type="entry name" value="ALS_ss_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55021">
        <property type="entry name" value="SSF55021"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00119">
        <property type="entry name" value="acolac_sm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51671">
        <property type="entry name" value="ACT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 8" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="7 8" id="KW-0100">Branched-chain amino acid biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 10" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="ACT" evidence="9">
        <location>
            <begin position="25"/>
            <end position="100"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000673"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005025"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00006341"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00011744"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU368092"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51671"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ70936.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="190" mass="21035" checksum="B14FDF9D151A7397" modified="2015-12-09" version="1">MNAQNVNAPSAYFLAEVSNEIETHTLSLIVDNEPGVLARVIGLFSGRGYNIDSLTVSETEHEKHLSRITIVTTGTPMIIEQIRHQLDRLVPVHRVTDLTVRARRLNQDKPLERELALIKVVGDGDKRLEALRLADAFKATVIDATTEHFVFEITGRTSKIEQFISIMKPLGLVEVSRTGVAAVQRGSEGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9B7</accession>
    <name>A0A0M7A9B7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="16">ATP synthase subunit b</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="16">ATP synthase F(0) sector subunit b</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="16">ATPase subunit I</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="16">F-type ATPase subunit b</fullName>
            <shortName evidence="16">F-ATPase subunit b</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="16 19" type="primary">atpF</name>
        <name evidence="19" type="ORF">LAX5112_02413</name>
    </gene>
    <organism evidence="19 20">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="20" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="20">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="14">Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0). The b'-subunit is a diverged and duplicated form of b found in plants and photosynthetic bacteria.</text>
    </comment>
    <comment type="function">
        <text evidence="13 16">F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.</text>
    </comment>
    <comment type="subunit">
        <text evidence="15 16">F-type ATPases have 2 components, F(1) - the catalytic core - and F(0) - the membrane proton channel. F(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). F(0) has three main subunits: a(1), b(2) and c(10-14). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. F(1) is attached to F(0) by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta and b chains.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Single-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="16">Cell membrane</location>
            <topology evidence="16">Single-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 16 17">Belongs to the ATPase B chain family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70214.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672024.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02413"/>
    <dbReference type="EnsemblBacteria" id="CTQ70214">
        <property type="protein sequence ID" value="CTQ70214"/>
        <property type="gene ID" value="LAX5112_02413"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045263">
        <property type="term" value="C:proton-transporting ATP synthase complex, coupling factor F(o)"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046933">
        <property type="term" value="F:proton-transporting ATP synthase activity, rotational mechanism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01398">
        <property type="entry name" value="ATP_synth_b_bprime"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002146">
        <property type="entry name" value="ATP_synth_b/b'su_bac/chlpt"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00430">
        <property type="entry name" value="ATP-synt_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="12 16" id="KW-0066">ATP synthesis</keyword>
    <keyword evidence="5 16" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 16 17" id="KW-0138">CF(0)</keyword>
    <keyword evidence="18" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="8 16 17" id="KW-0375">Hydrogen ion transport</keyword>
    <keyword evidence="10 16 17" id="KW-0406">Ion transport</keyword>
    <keyword evidence="11 16" id="KW-0472">Membrane</keyword>
    <keyword evidence="20" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 16 17" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 16" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4 16 17" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="6"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="18">
        <location>
            <begin position="31"/>
            <end position="113"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004377"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022547"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022781"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023310"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00025198"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00025614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00025830"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01398"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="RuleBase" id="RU003848"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="EMBL" id="CTQ70214.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="159" mass="17555" checksum="68C451787A2E2C41" modified="2015-12-09" version="1">MDASFWALVGLVLFFVLIAYLKVPGMIGGALDKRADDIKKELEEARKMREEAQELLSEYQRKRHEAESEAEAIVAEANAEAERLTVETNQALEEMIARRSKAAEEKIAQAETQAIAEVRAKATDIAVAAAEEILSAKVKDKVADDILAKSITQVKDQLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9M4</accession>
    <name>A0A0M7A9M4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">FMN-dependent NADPH-azoreductase</fullName>
            <ecNumber evidence="2">1.7.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">azr_2</name>
        <name evidence="2" type="ORF">LAX5112_02781</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.7.-.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71321.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672333.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02781"/>
    <dbReference type="EnsemblBacteria" id="CTQ71321">
        <property type="protein sequence ID" value="CTQ71321"/>
        <property type="gene ID" value="LAX5112_02781"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.360">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029039">
        <property type="entry name" value="Flavoprotein-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005025">
        <property type="entry name" value="FMN_Rdtase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03358">
        <property type="entry name" value="FMN_red"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52218">
        <property type="entry name" value="SSF52218"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FMN_red" evidence="1">
        <location>
            <begin position="4"/>
            <end position="154"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03358"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71321.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="191" mass="20314" checksum="EA889DD648EFCDCF" modified="2015-12-09" version="1">MRNPKILVLFGSARAGSYNGQLAALAAKKLAIRDAKVTRISLKDYPLPIYDGDLEEADGVPDNAEKLKTLFADHDGIFIACPEYNAGITPLLKNALDWISRVKGPGDAYRGKVFALGAASPGGFGGMRGLIGMRTILEVGLGAMVLPQMVSVAKASAAFNERGDLTDERASANLDKMIDALLRATLIELSH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9X7</accession>
    <name>A0A0M7A9X7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02902</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71669.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451351.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ71669">
        <property type="protein sequence ID" value="CTQ71669"/>
        <property type="gene ID" value="LAX5112_02902"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ71669.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="72" mass="7831" checksum="EC5B57E8AD46E7C0" modified="2015-12-09" version="1">MEKGKSVVIQLPDEDMLQRADLNSDQLESLVKSMLGSQVGRGIDDVIIRGGRLSGGKDAASAWTKTIWKRAC</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABD2</accession>
    <name>A0A0M7ABD2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">IMPACT family member YigZ</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yigZ</name>
        <name evidence="3" type="ORF">LAX5112_02986</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the IMPACT family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71957.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672488.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02986"/>
    <dbReference type="EnsemblBacteria" id="CTQ71957">
        <property type="protein sequence ID" value="CTQ71957"/>
        <property type="gene ID" value="LAX5112_02986"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023582">
        <property type="entry name" value="Impact"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001498">
        <property type="entry name" value="Impact_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036956">
        <property type="entry name" value="Impact_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR16301">
        <property type="entry name" value="PTHR16301"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01205">
        <property type="entry name" value="UPF0029"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="SSF54211"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="UPF0029" evidence="2">
        <location>
            <begin position="17"/>
            <end position="121"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007665"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01205"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ71957.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="188" mass="20646" checksum="F43381F8DCBA5E04" modified="2015-12-09" version="1">MSLKTITREYEGFLEDRKSRFMAFLVPIEQFEKRLEELRKEHRKANHIVTAHRRFLDDDRIEESGKDDGEPAGTSGMPTLRVLQGADLINCAVLIVRYFGGTKLGGGGLARAYSGAAQDAIAHAELMPFQKLSRKSVSADFASSSELERKITGFGLDVVSREYVETGVVLIVEGPVDLLDALGGTADD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABE2</accession>
    <name>A0A0M7ABE2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Homoserine/homoserine lactone efflux protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">rhtB_7</name>
        <name evidence="6" type="ORF">LAX5112_02990</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71967.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672492.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02990"/>
    <dbReference type="EnsemblBacteria" id="CTQ71967">
        <property type="protein sequence ID" value="CTQ71967"/>
        <property type="gene ID" value="LAX5112_02990"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006865">
        <property type="term" value="P:amino acid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001123">
        <property type="entry name" value="LeuE-type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30086">
        <property type="entry name" value="PTHR30086"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01810">
        <property type="entry name" value="LysE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006324">
        <property type="entry name" value="LeuE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="6"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="40"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="112"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="144"/>
            <end position="168"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ71967.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="203" mass="21591" checksum="4ADFE9A6199A11E2" modified="2015-12-09" version="1">MPLETWLAFVAASLILTMTPGPSILLGMVHALRFGTKRTLYTALGDISANMIQMLLVAAGLGIVIANSAVGFQAIKWTGVGVLIYMAVKMWRSAPTLLDAAAPDRSAHPARLYASGFAVAFGNPKALVFFTAFFPQFIDPTAPALNQLSIMCPTMAALDFAFVMLYAAGAKQFLGFLRQHPRLLNRTAGGTLLTAAGILATTR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AC48</accession>
    <name>A0A0M7AC48_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Disulfide-bond oxidoreductase YghU</fullName>
            <ecNumber evidence="4">1.8.4.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">yghU_2</name>
        <name evidence="4" type="ORF">LAX5112_03010</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the GST superfamily.</text>
    </comment>
    <dbReference type="EC" id="1.8.4.-" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72022.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672504.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03010"/>
    <dbReference type="EnsemblBacteria" id="CTQ72022">
        <property type="protein sequence ID" value="CTQ72022"/>
        <property type="gene ID" value="LAX5112_03010"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006749">
        <property type="term" value="P:glutathione metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010987">
        <property type="entry name" value="Glutathione-S-Trfase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036282">
        <property type="entry name" value="Glutathione-S-Trfase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004045">
        <property type="entry name" value="Glutathione_S-Trfase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004046">
        <property type="entry name" value="GST_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00043">
        <property type="entry name" value="GST_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02798">
        <property type="entry name" value="GST_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47616">
        <property type="entry name" value="SSF47616"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50405">
        <property type="entry name" value="GST_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50404">
        <property type="entry name" value="GST_NTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GST N-terminal" evidence="2">
        <location>
            <begin position="2"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="domain" description="GST C-terminal" evidence="3">
        <location>
            <begin position="87"/>
            <end position="211"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU003494"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50404"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50405"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ72022.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="212" mass="23959" checksum="AA25AD86A0831B9F" modified="2015-12-09" version="1">MAEFVLHCMAQSGHSYKVALMLELCGADWEASWVDFFNGQTRSEEFRSSLNEMGEVPVLVHGKETLTQSAVIMDYLVEKLGKFGWDTDEERREILRWTIFDNQKVSGMIGPLRFMRTLIKTGETDVVKFLDGRAKSALAILDKHLAKNDFAIGSKLTTADFSLCSYLFYEGELGIDLNDYQNVTAWLGRIKSQPGWKHPYDLMPGHPLPSAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACE6</accession>
    <name>A0A0M7ACE6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Cyclohexanone 1,2-monooxygenase</fullName>
            <ecNumber evidence="5">1.14.13.22</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">LAX5112_03305</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the FAD-binding monooxygenase family.</text>
    </comment>
    <dbReference type="EC" id="1.14.13.22" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72795.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672727.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03305"/>
    <dbReference type="EnsemblBacteria" id="CTQ72795">
        <property type="protein sequence ID" value="CTQ72795"/>
        <property type="gene ID" value="LAX5112_03305"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018667">
        <property type="term" value="F:cyclohexanone monooxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004499">
        <property type="term" value="F:N,N-dimethylaniline monooxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050661">
        <property type="term" value="F:NADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000960">
        <property type="entry name" value="Flavin_mOase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020946">
        <property type="entry name" value="Flavin_mOase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00743">
        <property type="entry name" value="FMO-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000332">
        <property type="entry name" value="FMO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00370">
        <property type="entry name" value="FMOXYGENASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0274">FAD</keyword>
    <keyword evidence="2" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="5" id="KW-0503">Monooxygenase</keyword>
    <keyword evidence="4 5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010139"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ72795.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="448" mass="49957" checksum="E0D7D359BE8DF0ED" modified="2015-12-09" version="1">MPQVAGAAPCASTQESYALIGAGPMGLAMAKVLREQGIPFQGFELHSDVGGVWDMTGPRSTMYESAHLISSKTMTEFADFPMPPDTPDYPSHRDMRQYFQAFARHFDLYRSYRFQTEVVKAQPIGPSGKGWRVVWRGPDGRQEEAIFKGLLIANGTLSTPNMPNFKGDFSGELIHAAKYKSATQFDGKRVLIVGAGNSGCDIAVDAIHHAKSTDLSLRRGYYFVPKYVFGKPADTLGKTANLPMWLRRKIDGVVLNWFAGNPQRYGFPKPDYKLYESHPVVNSLILFHAGHGDLKIRPDIDRLDGNTVHFADGSAADYDMIVTATGYVLDYPFISKDLLNWTDAAPSLYLNCMHPRRDDLFVLGMVEATGLGWQGRHEQAELVARYITGLQTGNREADNIKRYKANGFQRATGGVNYLKLARMAYYVDKKTYRKSVTQRIAALKEAAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACH2</accession>
    <name>A0A0M7ACH2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03296</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72778.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72778">
        <property type="protein sequence ID" value="CTQ72778"/>
        <property type="gene ID" value="LAX5112_03296"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ72778.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="51" mass="6173" checksum="46051138BD8A6817" modified="2015-12-09" version="1">MIYMKKTRRIYNELGLQLRNKHPKRRVKAKLREDWREAVGPERCLGHGLRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADI6</accession>
    <name>A0A0M7ADI6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Cadmium resistance transporter family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03381</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72949.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72949">
        <property type="protein sequence ID" value="CTQ72949"/>
        <property type="gene ID" value="LAX5112_03381"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004676">
        <property type="entry name" value="Cd-R_transporter"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03596">
        <property type="entry name" value="Cad"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="33"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="58"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="97"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="131"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="163"/>
            <end position="181"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72949.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="188" mass="19781" checksum="CB70171331CE2369" modified="2015-12-09" version="1">MFFALSVATTYVLTNIDGLFAFLALAATGRKPAAIIGFLLAQVVVIGGAVLVGSGAAVLAPADLGLLGLVPVALGFREVLKNRRKSEQVEDRKPAPGSIIGVVALFLALSTDTFVLMATFFADTRAELDHFVLSGALIAVAVLLAFGTILSRLLKPTPATERFFERLAPVVMIAAGVYILMDTQTDVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AE38</accession>
    <name>A0A0M7AE38_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02964</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71894.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672472.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ71894">
        <property type="protein sequence ID" value="CTQ71894"/>
        <property type="gene ID" value="LAX5112_02964"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="28"/>
            <end position="46"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71894.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="77" mass="8714" checksum="12B4C07D8EE3F24D" modified="2015-12-09" version="1">MISTSHTEQAFSRRHQERESQRVLMKRLFLLVFPFCFMTTILGRIGRIFGAHEGTTQSAYAEAKASAYAALGYAFHA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEQ9</accession>
    <name>A0A0M7AEQ9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Bacteriophage replication gene A protein (GPA)</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_03604</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Possible endonuclease which induces a single-strand cut and initiates DNA replication.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the phage GPA family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73635.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672959.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ73635">
        <property type="protein sequence ID" value="CTQ73635"/>
        <property type="gene ID" value="LAX5112_03604"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004519">
        <property type="term" value="F:endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008766">
        <property type="entry name" value="Replication_gene_A"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05840">
        <property type="entry name" value="Phage_GPA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0235">DNA replication</keyword>
    <keyword evidence="5" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0540">Nuclease</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003293"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009260"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022759"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ73635.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="538" mass="62386" checksum="FF4580ABD6EC2A42" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AES5</accession>
    <name>A0A0M7AES5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Transport permease protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ybhR</name>
        <name evidence="7" type="ORF">LAX5112_03373</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cell inner membrane</location>
            <topology evidence="6">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the ABC-2 integral membrane protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72932.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672782.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03373"/>
    <dbReference type="EnsemblBacteria" id="CTQ72932">
        <property type="protein sequence ID" value="CTQ72932"/>
        <property type="gene ID" value="LAX5112_03373"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000412">
        <property type="entry name" value="ABC_2_transport"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00164">
        <property type="entry name" value="ABC2TRNSPORT"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51012">
        <property type="entry name" value="ABC_TM2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="23"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="188"/>
            <end position="210"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="236"/>
            <end position="257"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="269"/>
            <end position="288"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="300"/>
            <end position="318"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="358"/>
            <end position="376"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00442"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU361157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ72932.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="381" mass="42405" checksum="4E362D021FCA7B68" modified="2015-12-09" version="1">MRSISRILAVFSKELAQLRRDRMTFGMVVMIPLIQLILFGYAINTNVRDIPIAVVDQSQTGISRILVQMVEATRVVTVTERLTTPQEAEEAIRSARVRAAFILPDDLTQRLARSPAVGLGTPPSTDQETSRPVAQWIVDGSDTMIASSIKSLRNMPLSEIYRHAPNRSTPTFEVTLFYNPEQRTAVNIVPGLVGTILTMTMIMFTSAAIVRERERGNMEMLINTPIRPIELMIGKIIPYIFIGLVQTAIILSLGHVLFNVPLDGNMIDLFVGTLLFIGASLSLGLVFSTIAQTQLQAMQMTVFVLLPSILLSGFMFPYEGMPLAAQYIAEALPATHFMRMIRGFVLRDATLMDVHRDVIWMSGFFVLGMIAAAVRFKKRLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AF34</accession>
    <name>A0A0M7AF34_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03414</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ73042.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03414"/>
    <dbReference type="EnsemblBacteria" id="CTQ73042">
        <property type="protein sequence ID" value="CTQ73042"/>
        <property type="gene ID" value="LAX5112_03414"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ73042.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="239" mass="27208" checksum="C25E251DD6D43A14" modified="2015-12-09" version="1">MTRDDCLQKLLWAVCIVLPLIIGLPDRAASETYFKFTAVEGMRHNMEGLRLLREAYAAIGVQFSVLYLTPNRSIQEVESGAADGELLRIRQVGDHFTEIVRVEIPVISLPIYAYTNDPQLAGLALDEMGRYRVGYVDGALFAQRMTAKLPDVTPVESPDMLFKMLELDRLDIVIAAENPGDTVMQTVGNGRIYKGSKQLRSVEFYHYLNRRHRALVPRIEWLLTELKEGRIQITHTMER</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="33" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AF76</accession>
    <name>A0A0M7AF76_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">NADH-quinone oxidoreductase subunit C</fullName>
            <ecNumber evidence="2">7.1.1.-</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="2">NADH dehydrogenase I subunit C</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="2">NDH-1 subunit C</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6" type="primary">nuoC1</name>
        <name evidence="2" type="synonym">nuoC</name>
        <name evidence="6" type="ORF">LAX5112_03488</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2 4">
            <text>a quinone + 5 H(+)(in) + NADH = a quinol + 4 H(+)(out) + NAD(+)</text>
            <dbReference type="Rhea" id="RHEA:57888"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:24646"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:132124"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="2">NDH-1 is composed of 14 different subunits. Subunits NuoB, C, D, E, F, and G constitute the peripheral sector of the complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Peripheral membrane protein</topology>
            <orientation evidence="2">Cytoplasmic side</orientation>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 3">Belongs to the complex I 30 kDa subunit family.</text>
    </comment>
    <dbReference type="EC" id="7.1.1.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73287.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008196555.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03488"/>
    <dbReference type="EnsemblBacteria" id="CTQ73287">
        <property type="protein sequence ID" value="CTQ73287"/>
        <property type="gene ID" value="LAX5112_03488"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008137">
        <property type="term" value="F:NADH dehydrogenase (ubiquinone) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048038">
        <property type="term" value="F:quinone binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.460.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01357">
        <property type="entry name" value="NDH1_NuoC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010218">
        <property type="entry name" value="NADH_DH_suC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037232">
        <property type="entry name" value="NADH_quin_OxRdtase_su_C/D-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001268">
        <property type="entry name" value="NADH_UbQ_OxRdtase_30kDa_su"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020396">
        <property type="entry name" value="NADH_UbQ_OxRdtase_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00329">
        <property type="entry name" value="Complex1_30kDa"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF143243">
        <property type="entry name" value="SSF143243"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01961">
        <property type="entry name" value="NuoC_fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00542">
        <property type="entry name" value="COMPLEX1_30K"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="2 3" id="KW-0520">NAD</keyword>
    <keyword evidence="6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2 4" id="KW-0874">Quinone</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-1278">Translocase</keyword>
    <keyword evidence="1 2 3" id="KW-0813">Transport</keyword>
    <keyword evidence="2" id="KW-0830">Ubiquinone</keyword>
    <feature type="domain" description="Complex1_30kDa" evidence="5">
        <location>
            <begin position="32"/>
            <end position="152"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01357"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU003456"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003582"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00329"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ73287.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="201" mass="23332" checksum="28EBBB8225FC1E3C" modified="2015-12-09" version="1">MDETLKELAEHIELGLSESLVSWKVEYGELTLVVNASDILDVVRYLRDNASCKFVNLTDICGVDYPAREKRFDVVYHFLSPFQNQRIRVKLETDDVTPVASLTSLFPGAEWFEREAYDMYGILFSGHPDLRRILTDYGFDGHPLRKDFPVTGFVEVRYDDEKKRVVYEPVRLNQEMRTFDFLSPWEGTDYVLPGDEKATTN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFG7</accession>
    <name>A0A0M7AFG7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6 8">Phosphoglucosamine mutase</fullName>
            <ecNumber evidence="6 8">5.4.2.10</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6 13" type="primary">glmM</name>
        <name evidence="13" type="ORF">LAX5112_03201</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6 8">Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6 8">
            <text>alpha-D-glucosamine 1-phosphate = D-glucosamine 6-phosphate</text>
            <dbReference type="Rhea" id="RHEA:23424"/>
            <dbReference type="ChEBI" id="CHEBI:58516"/>
            <dbReference type="ChEBI" id="CHEBI:58725"/>
            <dbReference type="EC" id="5.4.2.10"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="6">Binds 1 Mg(2+) ion per subunit.</text>
    </comment>
    <comment type="PTM">
        <text evidence="6">Activated by phosphorylation.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 6 7">Belongs to the phosphohexose mutase family.</text>
    </comment>
    <dbReference type="EC" id="5.4.2.10" evidence="6 8"/>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72493.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672637.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03201"/>
    <dbReference type="EnsemblBacteria" id="CTQ72493">
        <property type="protein sequence ID" value="CTQ72493"/>
        <property type="gene ID" value="LAX5112_03201"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008966">
        <property type="term" value="F:phosphoglucosamine mutase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd05802">
        <property type="entry name" value="GlmM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01554_B">
        <property type="entry name" value="GlmM_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005844">
        <property type="entry name" value="A-D-PHexomutase_a/b/a-I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016055">
        <property type="entry name" value="A-D-PHexomutase_a/b/a-I/II/III"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005845">
        <property type="entry name" value="A-D-PHexomutase_a/b/a-II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005846">
        <property type="entry name" value="A-D-PHexomutase_a/b/a-III"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005843">
        <property type="entry name" value="A-D-PHexomutase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036900">
        <property type="entry name" value="A-D-PHexomutase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016066">
        <property type="entry name" value="A-D-PHexomutase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005841">
        <property type="entry name" value="Alpha-D-phosphohexomutase_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006352">
        <property type="entry name" value="GlmM_bact"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02878">
        <property type="entry name" value="PGM_PMM_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02879">
        <property type="entry name" value="PGM_PMM_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02880">
        <property type="entry name" value="PGM_PMM_III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00408">
        <property type="entry name" value="PGM_PMM_IV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00509">
        <property type="entry name" value="PGMPMM"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53738">
        <property type="entry name" value="SSF53738"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55957">
        <property type="entry name" value="SSF55957"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01455">
        <property type="entry name" value="glmM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00710">
        <property type="entry name" value="PGM_PMM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6 8" id="KW-0413">Isomerase</keyword>
    <keyword evidence="4 6 7" id="KW-0460">Magnesium</keyword>
    <keyword evidence="3 6 7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2 6" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PGM_PMM_I" evidence="10">
        <location>
            <begin position="3"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="domain" description="PGM_PMM_II" evidence="11">
        <location>
            <begin position="158"/>
            <end position="255"/>
        </location>
    </feature>
    <feature type="domain" description="PGM_PMM_III" evidence="12">
        <location>
            <begin position="259"/>
            <end position="366"/>
        </location>
    </feature>
    <feature type="domain" description="PGM_PMM_IV" evidence="9">
        <location>
            <begin position="377"/>
            <end position="441"/>
        </location>
    </feature>
    <feature type="active site" description="Phosphoserine intermediate" evidence="6">
        <location>
            <position position="101"/>
        </location>
    </feature>
    <feature type="binding site" description="via phosphate group" evidence="6">
        <location>
            <position position="101"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="242"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="244"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="246"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="modified residue" description="Phosphoserine" evidence="6">
        <location>
            <position position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010231"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01554"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU004326"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU004327"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF00408"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF02878"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF02879"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF02880"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="CTQ72493.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="447" mass="47647" checksum="EC038B5EA948A037" modified="2015-12-09" version="1">MRKFFGTDGIRGQANAYPMTAEMALKIGMAAGLVFKNGGHRHRVVIGKDTRLSGYMLENALVAGFTSVGMDVFLLGPLPTPAVAMLTRSLRTDLGVMISASHNPFQDNGIKFFGPDGFKLSDEIEKSIETLVESDLTPHLASAQELGRAKRIDGAQERYIETAKRTLPRKMSLEGLRVVVDCANGAAYKVAPDALFELGADVIRMGVSPDGFNINKDCGSTSTDALSKKVHEVRADIGIALDGDADRVIIVDENGTVVDGDQLMAVVAQSWQANGRLAGNGIVATVMSNLGLERYLGDLGLGLERTKVGDRYVVEHMRANGFNVGGEQSGHIVLSDFATTGDGLIAALQIMACIKQQDKPVSEVCRRFEPVPQILKNVRYKGGAPLQHSEVKSAIEDGEARLGTSGRLVIRASGTEPLIRVMAEGDDADLVKQVVNDIAGVVASSAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AG36</accession>
    <name>A0A0M7AG36_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Thioredoxin peroxidase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">bcp_2</name>
        <name evidence="6" type="ORF">LAX5112_03532</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73402.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672899.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03532"/>
    <dbReference type="EnsemblBacteria" id="CTQ73402">
        <property type="protein sequence ID" value="CTQ73402"/>
        <property type="gene ID" value="LAX5112_03532"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004601">
        <property type="term" value="F:peroxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000866">
        <property type="entry name" value="AhpC/TSA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024706">
        <property type="entry name" value="Peroxiredoxin_AhpC-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013766">
        <property type="entry name" value="Thioredoxin_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00578">
        <property type="entry name" value="AhpC-TSA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000239">
        <property type="entry name" value="AHPC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51352">
        <property type="entry name" value="THIOREDOXIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="1 6" id="KW-0575">Peroxidase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Thioredoxin" evidence="5">
        <location>
            <begin position="4"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="active site" description="Cysteine sulfenic acid (-SOH) intermediate" evidence="4">
        <location>
            <position position="46"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00032824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR000239-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ73402.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="155" mass="16767" checksum="4D5821511F7597DE" modified="2015-12-09" version="1">MSDLAIGDAAPDFDLEADGDSRFTLSDLKGKPVVVYFYPKDNTPGCTKEAIAFTDNIDAFKDLGATIVGISPDSARKHDNFIAKHNLAVRLGADTDNATAEAYGVWVEKSMYGKKYMGVERATFLVDADGKIAQIWRKVKVPGHAEAVLEAVKAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AG51</accession>
    <name>A0A0M7AG51_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 5">Urease subunit gamma</fullName>
            <ecNumber evidence="4 5">3.5.1.5</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">Urea amidohydrolase subunit gamma</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="4 6" type="primary">ureA</name>
        <name evidence="6" type="ORF">LAX5112_03743</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 4 5">
            <text>2 H(+) + H2O + urea = CO2 + 2 NH4(+)</text>
            <dbReference type="Rhea" id="RHEA:20557"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16199"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="EC" id="3.5.1.5"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="4">Nitrogen metabolism; urea degradation; CO(2) and NH(3) from urea (urease route): step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Heterotrimer of UreA (gamma), UreB (beta) and UreC (alpha) subunits. Three heterotrimers associate to form the active enzyme.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4 5">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 5">Belongs to the urease gamma subunit family.</text>
    </comment>
    <dbReference type="EC" id="3.5.1.5" evidence="4 5"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74058.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008193663.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03743"/>
    <dbReference type="EnsemblBacteria" id="CTQ74058">
        <property type="protein sequence ID" value="CTQ74058"/>
        <property type="gene ID" value="LAX5112_03743"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00258">
        <property type="reaction ID" value="UER00370"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016151">
        <property type="term" value="F:nickel cation binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009039">
        <property type="term" value="F:urease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043419">
        <property type="term" value="P:urea catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd00390">
        <property type="entry name" value="Urease_gamma"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.280.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00739">
        <property type="entry name" value="Urease_gamma"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012010">
        <property type="entry name" value="Urease_gamma"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002026">
        <property type="entry name" value="Urease_gamma/gamma-beta_su"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036463">
        <property type="entry name" value="Urease_gamma_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00547">
        <property type="entry name" value="Urease_gamma"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001223">
        <property type="entry name" value="Urease_gamma"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54111">
        <property type="entry name" value="SSF54111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00193">
        <property type="entry name" value="urease_gam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 4 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00739"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU003850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ74058.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="100" mass="11019" checksum="3E0957514CB1EDEC" modified="2015-12-09" version="1">MNLTPREKDKLLVSMAAMVARRRLERGVKLNHPEAIALITDFVVEGARDGRSVADLMAAGAKVLTRDQVMEGIAEMIHDVQVEATFPDGTKLVTVHEPIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGY1</accession>
    <name>A0A0M7AGY1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glyoxalase-like domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03856</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74415.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673167.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03856"/>
    <dbReference type="EnsemblBacteria" id="CTQ74415">
        <property type="protein sequence ID" value="CTQ74415"/>
        <property type="gene ID" value="LAX5112_03856"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.180.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029068">
        <property type="entry name" value="Glyas_Bleomycin-R_OHBP_Dase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004360">
        <property type="entry name" value="Glyas_Fos-R_dOase_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00903">
        <property type="entry name" value="Glyoxalase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54593">
        <property type="entry name" value="SSF54593"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glyoxalase" evidence="1">
        <location>
            <begin position="8"/>
            <end position="117"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00903"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74415.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="123" mass="13433" checksum="7D8996310DAAD1BB" modified="2015-12-09" version="1">MQLGAFSISLTVKDLAKSKAFYEGLGFSDLGGSGSDGWVILKNGETVIGLFQDMFEKNILTFNPGWDQDAKKLDAFTDIRALQKTLKDKGYSFVQEVDETTTGPGSLMLLDPDGNPILIDQHV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="32" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AH48</accession>
    <name>A0A0M7AH48_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 6 7">Pantothenate kinase</fullName>
            <ecNumber evidence="4 6 7">2.7.1.33</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Pantothenic acid kinase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6 9" type="primary">coaA</name>
        <name evidence="9" type="ORF">LAX5112_03804</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 6 7">
            <text>(R)-pantothenate + ATP = (R)-4'-phosphopantothenate + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:16373"/>
            <dbReference type="ChEBI" id="CHEBI:10986"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29032"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.1.33"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 6 7">Cofactor biosynthesis; coenzyme A biosynthesis; CoA from (R)-pantothenate: step 1/5.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6 7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 6 7">Belongs to the prokaryotic pantothenate kinase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.33" evidence="4 6 7"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74229.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040452670.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03804"/>
    <dbReference type="EnsemblBacteria" id="CTQ74229">
        <property type="protein sequence ID" value="CTQ74229"/>
        <property type="gene ID" value="LAX5112_03804"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00241">
        <property type="reaction ID" value="UER00352"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004594">
        <property type="term" value="F:pantothenate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015937">
        <property type="term" value="P:coenzyme A biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd02025">
        <property type="entry name" value="PanK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00215">
        <property type="entry name" value="Pantothen_kinase_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004566">
        <property type="entry name" value="PanK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006083">
        <property type="entry name" value="PRK/URK"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10285:SF139">
        <property type="entry name" value="PTHR10285:SF139"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00485">
        <property type="entry name" value="PRK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000545">
        <property type="entry name" value="Pantothenate_kin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00554">
        <property type="entry name" value="panK_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6 7" id="KW-0173">Coenzyme A biosynthesis</keyword>
    <keyword evidence="6 7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 9" id="KW-0418">Kinase</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 9" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PRK" evidence="8">
        <location>
            <begin position="94"/>
            <end position="250"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="99"/>
            <end position="106"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001206"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005225"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006087"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00015080"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00215"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003530"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ74229.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="321" mass="36495" checksum="6B7C3FBD8CBDF495" modified="2015-12-09" version="1">MDQKVATALDMDLSPYRVFTERQWSRLRADTPMTLTAKEVAQLQGLNAPISMEQVEAIYLPLSRLLAFYAESTVGLHQATQDFLGTRDGKTPFIIGVAGSVSVGKSTTSRVLRELLARWPASPKVDLITTDGFLFPNAILESEGLMSKKGFPESFDRPRLLKFLSDIKAGKRHVRAPVYSHFYYDVMPGHAVTVDKPDILIVEGLNVLQTRELPRDGRAVPFVSDFFDFSVYMDADEELLRQWYVDRFMHLRETAFRDPGSYFHKFSRITDKEAVETANTIWSNINLVNLRENILPTRPRADLILTKNSSHRISKVALRKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AH53</accession>
    <name>A0A0M7AH53_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Chlorophyll synthesis pathway protein BchC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03646</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73752.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672989.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03646"/>
    <dbReference type="EnsemblBacteria" id="CTQ73752">
        <property type="protein sequence ID" value="CTQ73752"/>
        <property type="gene ID" value="LAX5112_03646"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011032">
        <property type="entry name" value="GroES-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50129">
        <property type="entry name" value="SSF50129"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ73752.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="337" mass="35963" checksum="EF6EBB90596DB71A" modified="2015-12-09" version="1">MPTSAKEADRHEAHAIWYVGGGECAVKPAMLSHPQPGEVLIKALNSVISRGTEGLVLRGAVPETEWHRMRAPFQEGQFPFPVKYGYASVGTVIDGDAELAGKLVFSLFPHQDLYTLPSDACVPVPVSIPAKRATLAANLETALNALWDGKPSPGDHICVVGGGVVGLLTAYVCNRIPGSTVTLVDINPARAEIASALGFRFSLPGDAPRDQDLVFHTSASAAGLTTALSSAGDGASVIEMSWYGDQTVGVPLGADFHSRRIKLISSQVGTIPAERQARWTYRRRLELALSLLDDPRLDLLISHKIPFEDAAVRVPEILNKASDVLAAVIVYDQADEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHH8</accession>
    <name>A0A0M7AHH8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Neu5Ac permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">siaT_21</name>
        <name evidence="5" type="ORF">LAX5112_03761</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74107.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03761"/>
    <dbReference type="EnsemblBacteria" id="CTQ74107">
        <property type="protein sequence ID" value="CTQ74107"/>
        <property type="gene ID" value="LAX5112_03761"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010656">
        <property type="entry name" value="DctM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004681">
        <property type="entry name" value="TRAP_DctM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33362">
        <property type="entry name" value="PTHR33362"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06808">
        <property type="entry name" value="DctM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006066">
        <property type="entry name" value="HI0050"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00786">
        <property type="entry name" value="dctM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="6"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="46"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="89"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="134"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="167"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="213"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="240"/>
            <end position="260"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="272"/>
            <end position="293"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="313"/>
            <end position="343"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="355"/>
            <end position="376"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="396"/>
            <end position="420"/>
        </location>
    </feature>
    <feature type="domain" description="DctM" evidence="4">
        <location>
            <begin position="8"/>
            <end position="412"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF06808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ74107.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="424" mass="44701" checksum="B93C1A0E097840E4" modified="2015-12-09" version="1">MTTILILAALFTLLLIRVPVAFTLGGLGLALLLFGGFSPLMAPQAILSTLDGFILLAVPLFLLMSNVLLKGGVGKDLFAAVHAWVGHWPGGLAVATIVSCGIFAAISGSSVATAATIGTVAIPEMIGRGYEKKFVYGLLAAGGTLGILIPPSIPMIVYGFVTEQSVIALFLAGIGPGLLLVALFIAFAMIYARWFGGYTPEPPTSTKERISSTIRALPSMVLAGVVIGVIYTGIATPTEAAAIGFAVALLITGLYLRTLTWQGFKEAAFESMVTTVAILLIVAGAKVFGKAITLYRIPQEISMFIGQNIDTPLAFILVVSVVLLIMGLVFEALSMVLIMTPVLLPAAMALGFDPIWFGVYMVVMVECALITPPVGLNLYVIQSVARSSLADVSRGVLPFLALMLLSVVILYLWTDLALYIPFKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AI20</accession>
    <name>A0A0M7AI20_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Aspartate aminotransferase</fullName>
            <ecNumber evidence="2">2.6.1.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">aspC_2</name>
        <name evidence="2" type="ORF">LAX5112_03539</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.6.1.1" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73423.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672906.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03539"/>
    <dbReference type="EnsemblBacteria" id="CTQ73423">
        <property type="protein sequence ID" value="CTQ73423"/>
        <property type="gene ID" value="LAX5112_03539"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004069">
        <property type="term" value="F:L-aspartate:2-oxoglutarate aminotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009058">
        <property type="term" value="P:biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004839">
        <property type="entry name" value="Aminotransferase_I/II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00155">
        <property type="entry name" value="Aminotran_1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Aminotran_1_2" evidence="1">
        <location>
            <begin position="39"/>
            <end position="382"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73423.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="386" mass="41633" checksum="A48CDCF84661A02E" modified="2015-12-09" version="1">MVQDRFRPSKRSDVAPFIAMDVLAEAAGLEAAGHSIIHMEVGQPSAPAPETALTAAQAALKHGKLGYTEAIGIKPLRAALSAHYQRTYGVDVPSGRIMATTGSSAAFNLAFLAAFDPGDRIVLTAPGYPAYRNIIKALGLVPVEVEVGAETRWSLTPDHLDAAQKDGPVRGVLVASPANPTGTMMTAEALSDLIAYCDKAGIWFISDEIYHGLDYAGEQKTALETSQNAIIINSFSKYYCMTGWRIGWMVLPEQLVRPTERIAQSLYISPPELSQIAAASALDAVQELEAVKAGYAANRELLVKGLPEIGFDKLLPVDGAFYIYADISRFSSDSLDFAKRMLHEAGVAATPGVDFDPVHGKEFMRFSFAGAHDDMKSALQRLKDWI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AI58</accession>
    <name>A0A0M7AI58_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Cytochrome d ubiquinol oxidase subunit 2</fullName>
            <ecNumber evidence="8">1.10.3.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">cydB_2</name>
        <name evidence="8" type="ORF">LAX5112_03553</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the cytochrome ubiquinol oxidase subunit 2 family.</text>
    </comment>
    <dbReference type="EC" id="1.10.3.-" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73463.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672915.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03553"/>
    <dbReference type="EnsemblBacteria" id="CTQ73463">
        <property type="protein sequence ID" value="CTQ73463"/>
        <property type="gene ID" value="LAX5112_03553"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003317">
        <property type="entry name" value="Cyt-d_oxidase_su2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43141">
        <property type="entry name" value="PTHR43141"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02322">
        <property type="entry name" value="Cyt_bd_oxida_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="12"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="52"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="83"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="123"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="151"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="195"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="225"/>
            <end position="247"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="259"/>
            <end position="281"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="301"/>
            <end position="326"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007543"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ73463.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="336" mass="36838" checksum="18A9EAF572A9E1E2" modified="2015-12-09" version="1">MTFFGDPTVWLPLAFAALMGISILVYVVLDGFDLGVGILLPLGDEEEKDRMIAAIGPFWDANETWLVLAVGLLLVAFPVAHGVILTALYLPVAVMLIGLILRGVAFEFRAKTTGKQKHRWNQAFFFGSVSASLAQGYMLGLYIMGLEHTPATVAFGVLTALCLTAGYGFIGATWLIIKSEGTLQMKAIRWARTRLWGVVLGFGAISLASPLVSERIFEKWFSFPSMILLAPLPLMSGLLVFILYTALQHLPAKDDKWAWVPFTATASLFLLAFAGLAYSFYPYVVPEQLTLYESASAPESLFIILVGALFVLPVIIGYTILAYTVFRGKATELRYD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIF8</accession>
    <name>A0A0M7AIF8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04019</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74878.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74878">
        <property type="protein sequence ID" value="CTQ74878"/>
        <property type="gene ID" value="LAX5112_04019"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="74"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="107"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="144"/>
            <end position="165"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74878.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="168" mass="17756" checksum="20993FABAE03000A" modified="2015-12-09" version="1">MTSIDYSGSRRRETGTPHLLPPLTPATAITLLLAGLVATGVWEIWARGVTPLLIGGPLEPAGLIKSSFGISSSFLAETIHIATGLIIYPLGYLFVAQPIARLLPVEFPWSLTGAGFGIGLWVFAMYVMAHLVAGFPAFLGFGDLAFASFFGHLLYGLAVAGIVALRRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIH6</accession>
    <name>A0A0M7AIH6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Ferric uptake regulation protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">zur</name>
        <name evidence="5" type="ORF">LAX5112_03848</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Acts as a global negative controlling element, employing Fe(2+) as a cofactor to bind the operator of the repressed genes.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the Fur family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74391.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673163.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03848"/>
    <dbReference type="EnsemblBacteria" id="CTQ74391">
        <property type="protein sequence ID" value="CTQ74391"/>
        <property type="gene ID" value="LAX5112_03848"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1490.190">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002481">
        <property type="entry name" value="FUR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043135">
        <property type="entry name" value="Fur_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33202">
        <property type="entry name" value="PTHR33202"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01475">
        <property type="entry name" value="FUR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002997"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007957"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00020910"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ74391.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="136" mass="15153" checksum="2364B8C37C010A13" modified="2015-12-09" version="1">MAHAHPDLTKNQALVFGKLSDASGPLTAYTLLDDLREKGFRAPLQVYRALDKLVDYGLVHRLESLNAFVACRHKGCADHKTAAFAICETCGNVQEFSPDRAIEDLLKWTKEQEFRLSRTTIELRGLCKSCSASQQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIV3</accession>
    <name>A0A0M7AIV3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03978</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74799.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673273.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74799">
        <property type="protein sequence ID" value="CTQ74799"/>
        <property type="gene ID" value="LAX5112_03978"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ74799.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="139" mass="15111" checksum="86AFB16BD8F07F69" modified="2015-12-09" version="1">MIEDKIAPFIGTWILDSDASEFEQGDPPKSATLKIEDNFGMAVFTMNQVSADGGVTNDSFEGVPDGPEVKLGKSGLVDAMRLVFANDRNLVSEARRGGLTIMKAERELSEDGRTLTVTQTVHLVDVASFTNVSVYRRAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJI8</accession>
    <name>A0A0M7AJI8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">LL-diaminopimelate aminotransferase</fullName>
            <ecNumber evidence="2">2.6.1.83</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">dapL</name>
        <name evidence="2" type="ORF">LAX5112_03702</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.6.1.83" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ73943.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673041.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03702"/>
    <dbReference type="EnsemblBacteria" id="CTQ73943">
        <property type="protein sequence ID" value="CTQ73943"/>
        <property type="gene ID" value="LAX5112_03702"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010285">
        <property type="term" value="F:L,L-diaminopimelate aminotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009058">
        <property type="term" value="P:biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004839">
        <property type="entry name" value="Aminotransferase_I/II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00155">
        <property type="entry name" value="Aminotran_1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Aminotran_1_2" evidence="1">
        <location>
            <begin position="42"/>
            <end position="370"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73943.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="407" mass="44598" checksum="94EEE91BA9A6E604" modified="2015-12-09" version="1">MTASQTTYKRGAALPGSNPFQRLADLLDGQTPGLEPIMMTIGEPQHPIPEFTVEVLAENMADFRRYPPINGTPEFRSTIADWLDKRYGLNGSIDPDFGVLPLNGSREGLSFGAIAARDQLDKGLDHPAVILPNPFYQTYAAAAHVADGETVLLDAVSEHQFLPDLDGLEPALLDRTVAFYVASPTNPEGSVTTLEYWQKLIGMARKHRFMIFADECYSEIYRTTPPPGVLEAAHRMGTDFSNIVVLNSLSKRSNLAGLRCGFAAGDPVFLKKWAKFRGLAAPQVPLPAQAVAVRAYRDEAHVEENRRLYNEKYEAAERLLGPILGPVTTEAGFFLWLNVEKWGDGVSVTQALWRDTGVKVLPGSYLASDQSDGSNPGRNYIRAGLVAPLAQTEIALERVANWLGDKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJR2</accession>
    <name>A0A0M7AJR2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Ribonuclease Z</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03936</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74682.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74682">
        <property type="protein sequence ID" value="CTQ74682"/>
        <property type="gene ID" value="LAX5112_03936"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.15.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001279">
        <property type="entry name" value="Metallo-B-lactamas"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036866">
        <property type="entry name" value="RibonucZ/Hydroxyglut_hydro"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00753">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00849">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56281">
        <property type="entry name" value="SSF56281"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lactamase_B" evidence="1">
        <location>
            <begin position="50"/>
            <end position="256"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74682.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="279" mass="29592" checksum="C84B59D0DD50335C" modified="2015-12-09" version="1">MSITSTTHPLHVGDIAIMSLSDGHLDIPAAYFSNASDEEIQAVSPTTRFGATCWLIETGPKKVLVDAGSGSWLKERFPETGFITAAGSSLINAANEITDIILTHLHADHIGGLIADGQSLFPNATVHLQNTEWAFWTDENLVEAVPEDKRPIAQLIQTLARPIASQIKLHDGDADLENGIHVTSAPGHTPGHQIVRISSGGEQVMLLGDALVSGVLQFANPDVHYALDSAPETAAETRKTLFSELAAERIPLAATHLESPGFGMLTATGGGGYHFEPLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKZ6</accession>
    <name>A0A0M7AKZ6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">6-N-hydroxylaminopurine resistance protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04151</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75221.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673403.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04151"/>
    <dbReference type="EnsemblBacteria" id="CTQ75221">
        <property type="protein sequence ID" value="CTQ75221"/>
        <property type="gene ID" value="LAX5112_04151"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030151">
        <property type="term" value="F:molybdenum ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005302">
        <property type="entry name" value="MoCF_Sase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011037">
        <property type="entry name" value="Pyrv_Knase-like_insert_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03473">
        <property type="entry name" value="MOSC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50800">
        <property type="entry name" value="SSF50800"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51340">
        <property type="entry name" value="MOSC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MOSC" evidence="1">
        <location>
            <begin position="29"/>
            <end position="166"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51340"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75221.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="228" mass="25106" checksum="4FFDF7569DA4B617" modified="2015-12-09" version="1">MRTAQILGVYAGKPEDRWDGKAPSSIRKSLIKGAVQLTETGIAEDQQADLAVHGGPEKALHHYPSEHYADWAERFGTSPFAYEPGTFGENISSSGFTEEDLCIGDVFTAGTARLQICQGRQPCWKLNMHTQNPALAAHFQKTGKTGWYYRVLETGVFKAGDSMTLIDRPCPDWNLKDVIFARFNPKLESSTASALANLAVLADPWRAAFAKKVDPDFVEDTSRRLPGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AL71</accession>
    <name>A0A0M7AL71_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Putative dimethyl sulfoxide reductase chain YnfE</fullName>
            <ecNumber evidence="6">1.8.99.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">ynfE</name>
        <name evidence="6" type="ORF">LAX5112_03894</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.8.99.-" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74533.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673199.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03894"/>
    <dbReference type="EnsemblBacteria" id="CTQ74533">
        <property type="protein sequence ID" value="CTQ74533"/>
        <property type="gene ID" value="LAX5112_03894"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043546">
        <property type="term" value="F:molybdopterin cofactor binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd02786">
        <property type="entry name" value="MopB_CT_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009010">
        <property type="entry name" value="Asp_de-COase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006657">
        <property type="entry name" value="MoPterin_dinucl-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006656">
        <property type="entry name" value="Mopterin_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006963">
        <property type="entry name" value="Mopterin_OxRdtase_4Fe-4S_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037920">
        <property type="entry name" value="YoaE_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04879">
        <property type="entry name" value="Molybdop_Fe4S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00384">
        <property type="entry name" value="Molybdopterin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01568">
        <property type="entry name" value="Molydop_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00926">
        <property type="entry name" value="Molybdop_Fe4S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50692">
        <property type="entry name" value="SSF50692"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51669">
        <property type="entry name" value="4FE4S_MOW_BIS_MGD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="2 4" id="KW-0408">Iron</keyword>
    <keyword evidence="3 4" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="1 4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="4Fe-4S Mo/W bis-MGD-type" evidence="5">
        <location>
            <begin position="6"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="13"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="17"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="21"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="50"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51669"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ74533.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="698" mass="76723" checksum="A42017B027F65C1F" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AL88</accession>
    <name>A0A0M7AL88_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Homoprotocatechuate degradation operon regulator, HpaR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04136</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75176.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04136"/>
    <dbReference type="EnsemblBacteria" id="CTQ75176">
        <property type="protein sequence ID" value="CTQ75176"/>
        <property type="gene ID" value="LAX5112_04136"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000835">
        <property type="entry name" value="HTH_MarR-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12802">
        <property type="entry name" value="MarR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00347">
        <property type="entry name" value="HTH_MARR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50995">
        <property type="entry name" value="HTH_MARR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH marR-type" evidence="1">
        <location>
            <begin position="34"/>
            <end position="166"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75176.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="185" mass="20966" checksum="5525763A72309069" modified="2015-12-09" version="1">MTDINFKASLPTKSKLVSQSEPAGDNDGTANAVPYDLIELLFFAYRDFTGDPDDVLAEYDFGRAHHRVLHFVERNPGIMVTDLLGILRITKQSLGRVLKQLVDADIIEQREGPHDRRQRLLYTTERGQVLADDLARLQQKRLERALIGLPDGADVIVRQFLLQVIDPEARNDILGLIRSSYELKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALJ9</accession>
    <name>A0A0M7ALJ9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">V-type ATP synthase subunit I</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">LAX5112_04430</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the V-ATPase 116 kDa subunit family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ75998.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451228.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000024.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04430"/>
    <dbReference type="EnsemblBacteria" id="CTQ75998">
        <property type="protein sequence ID" value="CTQ75998"/>
        <property type="gene ID" value="LAX5112_04430"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033179">
        <property type="term" value="C:proton-transporting V-type ATPase, V0 domain"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046961">
        <property type="term" value="F:proton-transporting ATPase activity, rotational mechanism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002490">
        <property type="entry name" value="V-ATPase_116kDa_su"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11629">
        <property type="entry name" value="PTHR11629"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0406">Ion transport</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="312"/>
            <end position="341"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="361"/>
            <end position="380"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="400"/>
            <end position="419"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="431"/>
            <end position="448"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="454"/>
            <end position="474"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="495"/>
            <end position="519"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="539"/>
            <end position="561"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009904"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ75998.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="597" mass="65405" checksum="E36FA00CA3A72E95" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALZ1</accession>
    <name>A0A0M7ALZ1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Lipid A core-O-antigen ligase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">LAX5112_04236</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the O-antigen polymerase family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75446.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673472.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000021.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04236"/>
    <dbReference type="EnsemblBacteria" id="CTQ75446">
        <property type="protein sequence ID" value="CTQ75446"/>
        <property type="gene ID" value="LAX5112_04236"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016874">
        <property type="term" value="F:ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007016">
        <property type="entry name" value="O-antigen_ligase-related"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04932">
        <property type="entry name" value="Wzy_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0436">Ligase</keyword>
    <keyword evidence="3 4" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="7"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="29"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="67"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="97"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="124"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="158"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="184"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="206"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="230"/>
            <end position="253"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="322"/>
            <end position="342"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="349"/>
            <end position="370"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="376"/>
            <end position="393"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005353"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ75446.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="406" mass="43755" checksum="667B4EFBA13BDA70" modified="2015-12-09" version="1">MNVSKYLNLNSVVVTVFATPFLMVLSRNIATPIFVFVAVLLLLFAAIDRSPKAVFQSVIDTARSPAALLFGVLVVFMGLSVGWSTSVERALETTVHFAGNLALFGLCVAALAVSASARLIRSILFPLAIIGTALFLVSEVILGTPVRALVGASPEVFRMNRAAVALVLMLPFVLYALPQAKKVLGLRLAAVLTVGGAAFMSDSETAKLAFIATILLLPVFVLLKDKGIWFLGLLTLGTFILMPVISPHVMSLIPDVLASRLPYGSVGIRADIWTAFSSLIKNHFFLGHGVDASYMAAVDYKDLDVAAPFLGWGHPHNFAIQVWYELGVIGVVLFAALIFLFFRSLRAVPLDLLPAVLSTVAAVWTVALVSHGAWQAWWWCLVGLVSVLWLIELKCRHGAEAPKSDT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AM41</accession>
    <name>A0A0M7AM41_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 10">Adenylosuccinate lyase</fullName>
            <shortName evidence="10">ASL</shortName>
            <ecNumber evidence="4 10">4.3.2.2</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9 10">Adenylosuccinase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="13" type="primary">purB</name>
        <name evidence="13" type="ORF">LAX5112_04518</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>(2S)-2-[5-amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamido]succinate = 5-amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamide + fumarate</text>
            <dbReference type="Rhea" id="RHEA:23920"/>
            <dbReference type="ChEBI" id="CHEBI:29806"/>
            <dbReference type="ChEBI" id="CHEBI:58443"/>
            <dbReference type="ChEBI" id="CHEBI:58475"/>
            <dbReference type="EC" id="4.3.2.2"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="7">
            <dbReference type="Rhea" id="RHEA:23921"/>
        </physiologicalReaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>N(6)-(1,2-dicarboxyethyl)-AMP = AMP + fumarate</text>
            <dbReference type="Rhea" id="RHEA:16853"/>
            <dbReference type="ChEBI" id="CHEBI:29806"/>
            <dbReference type="ChEBI" id="CHEBI:57567"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="4.3.2.2"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="8">
            <dbReference type="Rhea" id="RHEA:16854"/>
        </physiologicalReaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 10">Purine metabolism; AMP biosynthesis via de novo pathway; AMP from IMP: step 2/2.</text>
    </comment>
    <comment type="pathway">
        <text evidence="1 10">Purine metabolism; IMP biosynthesis via de novo pathway; 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate: step 2/2.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 10">Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.</text>
    </comment>
    <dbReference type="EC" id="4.3.2.2" evidence="4 10"/>
    <dbReference type="EMBL" id="CXWD01000025">
        <property type="protein sequence ID" value="CTQ76208.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04518"/>
    <dbReference type="EnsemblBacteria" id="CTQ76208">
        <property type="protein sequence ID" value="CTQ76208"/>
        <property type="gene ID" value="LAX5112_04518"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00074">
        <property type="reaction ID" value="UER00132"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00075">
        <property type="reaction ID" value="UER00336"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070626">
        <property type="term" value="F:(S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004018">
        <property type="term" value="F:N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044208">
        <property type="term" value="P:'de novo' AMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006189">
        <property type="term" value="P:'de novo' IMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.275.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019468">
        <property type="entry name" value="AdenyloSucc_lyase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024083">
        <property type="entry name" value="Fumarase/histidase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020557">
        <property type="entry name" value="Fumarate_lyase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000362">
        <property type="entry name" value="Fumarate_lyase_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022761">
        <property type="entry name" value="Fumarate_lyase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008948">
        <property type="entry name" value="L-Aspartase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004769">
        <property type="entry name" value="Pur_lyase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10397">
        <property type="entry name" value="ADSL_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00206">
        <property type="entry name" value="Lyase_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00149">
        <property type="entry name" value="FUMRATELYASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM00998">
        <property type="entry name" value="ADSL_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48557">
        <property type="entry name" value="SSF48557"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00928">
        <property type="entry name" value="purB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00163">
        <property type="entry name" value="FUMARATE_LYASES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10 13" id="KW-0456">Lyase</keyword>
    <keyword evidence="6 10" id="KW-0658">Purine biosynthesis</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ADSL_C" evidence="12">
        <location>
            <begin position="436"/>
            <end position="523"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="58"/>
            <end position="81"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004706"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004734"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008273"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012339"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00017058"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00024477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00024487"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00030717"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU361172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="SMART" id="SM00998"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="CTQ76208.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="526" mass="58802" checksum="08C0F5813D2DF6DC" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMF4</accession>
    <name>A0A0M7AMF4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Creatinine amidohydrolase family protein, mycofactocin system</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_03969</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="4">Belongs to the creatininase superfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74774.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673267.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03969"/>
    <dbReference type="EnsemblBacteria" id="CTQ74774">
        <property type="protein sequence ID" value="CTQ74774"/>
        <property type="gene ID" value="LAX5112_03969"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008610">
        <property type="term" value="P:lipid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10310">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024087">
        <property type="entry name" value="Creatininase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003785">
        <property type="entry name" value="Creatininase/forma_Hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006694">
        <property type="entry name" value="Fatty_acid_hydroxylase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35005">
        <property type="entry name" value="PTHR35005"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02633">
        <property type="entry name" value="Creatininase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04116">
        <property type="entry name" value="FA_hydroxylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF102215">
        <property type="entry name" value="SSF102215"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="35"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="78"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="123"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="208"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="domain" description="Fatty acid hydroxylase" evidence="6">
        <location>
            <begin position="132"/>
            <end position="279"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00024029"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF04116"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ74774.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="600" mass="66619" checksum="B4AD08DAD01D3B4A" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMY1</accession>
    <name>A0A0M7AMY1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Extracytoplasmic solute receptor protein YiaO</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">yiaO_7</name>
        <name evidence="4" type="ORF">LAX5112_04437</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the bacterial solute-binding protein 7 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ76017.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673646.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000024.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04437"/>
    <dbReference type="EnsemblBacteria" id="CTQ76017">
        <property type="protein sequence ID" value="CTQ76017"/>
        <property type="gene ID" value="LAX5112_04437"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071702">
        <property type="term" value="P:organic substance transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.190.170">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018389">
        <property type="entry name" value="DctP_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038404">
        <property type="entry name" value="TRAP_DctP_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33376">
        <property type="entry name" value="PTHR33376"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03480">
        <property type="entry name" value="DctP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0675">Receptor</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809777" evidence="3">
        <location>
            <begin position="28"/>
            <end position="345"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ76017.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="345" mass="37846" checksum="44618ECB5F72F950" modified="2015-12-09" version="1">MKRIKNAVCGAVAAGLFAGLMAQPVMAANVDGPPVFWKFSVWGKSRALTAGPEHLAARLAEETGGKFQLKIFYGDQLSKAKENLDGMRVNAFEAAIVCNFYHPAKTPALMVMSLPFLPIKDFDTSIAVRDALYQHPAAVSDLEKWNAISYASTHLPQYEFMGTGEPPETLEDWNGLRVRAGGGVGLAMEKLGAVRQSMPATEVYTALQRGIADAVSFPFTYAHGAYKLQEVASWFTGNLKPGTADCPIVLNKTSYDSLPDQYKDLLASLKPEVDEVYREVYGKADERYLPIFQEALTEVTYDPATREEFQNVAGQPIWRQWVSDNQESFDAQGVLDTVLNAGNGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AN62</accession>
    <name>A0A0M7AN62_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04465</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ76097.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673668.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000024.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76097">
        <property type="protein sequence ID" value="CTQ76097"/>
        <property type="gene ID" value="LAX5112_04465"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025975">
        <property type="entry name" value="Polysacc_lyase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14099">
        <property type="entry name" value="Polysacc_lyase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809552" evidence="1">
        <location>
            <begin position="33"/>
            <end position="298"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76097.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="298" mass="33726" checksum="6D6880D0B2673E51" modified="2015-12-09" version="1">MKAGDTGAILSKVKTCSICGVLTLLGASTALAQDEIVIGGKAVPVEEDSYKCDMTAEEIPDDLSIKRLANCESAELIDFEMPGKDLRAVKFTISPDDKPISSGIRAELRDMYVAENGEEVWYRISTLIPKTFPMEADHRLVLSQWHERLRAGGHSLRPNISHRLWNGRFVVTLWSDDVIERLGTIEGDGQILYSEPRIDQGVYHEYVYRVVWSPEDDGRIDAWMRQCPPLRETCDGRWQDMIQFEGTTGYSNDKVDGYYFKYGLYTVSDFEVPFTAFHKDYWSGPTAESIGLSDPIFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="34" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APR0</accession>
    <name>A0A0M7APR0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Acetylornithine deacetylase</fullName>
            <ecNumber evidence="5">3.5.1.16</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">argE_2</name>
        <name evidence="5" type="ORF">LAX5112_04804</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase M20A family. ArgE subfamily.</text>
    </comment>
    <dbReference type="EC" id="3.5.1.16" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000031">
        <property type="protein sequence ID" value="CTQ77105.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673963.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000031.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04804"/>
    <dbReference type="EnsemblBacteria" id="CTQ77105">
        <property type="protein sequence ID" value="CTQ77105"/>
        <property type="gene ID" value="LAX5112_04804"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008777">
        <property type="term" value="F:acetylornithine deacetylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006526">
        <property type="term" value="P:arginine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010169">
        <property type="entry name" value="AcOrn-deacetyl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001261">
        <property type="entry name" value="ArgE/DapE_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036264">
        <property type="entry name" value="Bact_exopeptidase_dim_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002933">
        <property type="entry name" value="Peptidase_M20"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011650">
        <property type="entry name" value="Peptidase_M20_dimer"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07687">
        <property type="entry name" value="M20_dimer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01546">
        <property type="entry name" value="Peptidase_M20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55031">
        <property type="entry name" value="SSF55031"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01892">
        <property type="entry name" value="AcOrn-deacetyl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00759">
        <property type="entry name" value="ARGE_DAPE_CPG2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="2" id="KW-0055">Arginine biosynthesis</keyword>
    <keyword evidence="3 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="M20_dimer" evidence="4">
        <location>
            <begin position="164"/>
            <end position="275"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022571"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF07687"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ77105.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="377" mass="40702" checksum="C2486EAFB5E086B5" modified="2015-12-09" version="1">MLTKLVSFNTVSDRSNLEFISFVEEYLSSYGISSVRVPDETGEKAALFATVGPNVDGGIVLSAHTDVVPVDGQNWTSDPFSAWEDGGRLYGRGTADMKGFAATVLAKVPDFLSANLSKPIHIALSYDEEVGCFGAPPMIKAMLVEGPHPSAVIVGEPTNMKVVTGHKGIAVLKTRVHGHPVHSSQLHRGVSAISAAVKLISWLDGQTEQNKAKADLECPFEPPYTTLHCGTIQGGKAHNITAQSCEFMTDIRLLPGETLEDWIAAYRNYAADHVLPDMQEISKDCRIDIDVRAMVPGLSEETDGTAEQLVRRLTGDNGRHVVVYATEGGQFQEHGLSTVVCGPGSIDQAHQADEFIELAELGKCANFLDDLCEKVLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQG3</accession>
    <name>A0A0M7AQG3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_04662</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000028">
        <property type="protein sequence ID" value="CTQ76656.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673846.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000028.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76656">
        <property type="protein sequence ID" value="CTQ76656"/>
        <property type="gene ID" value="LAX5112_04662"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="32"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="61"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="103"/>
            <end position="130"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ76656.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="163" mass="17773" checksum="373CCA5372595254" modified="2015-12-09" version="1">MESIVRTMRIIWRAELLIIEAKLNVATKRIGATAFAGLIFVFGLAMLNVAGFFALQEPWGPIYAALGVAAADFLIAILLVLWASRLTTGPELDLARDVRDAGLQELEAKAEDIQDEVEAVRDELLALKNSLVSFSRNPLDGTLNSLLTPLLTLLIKSLSKPKT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQG5</accession>
    <name>A0A0M7AQG5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_04738</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000029">
        <property type="protein sequence ID" value="CTQ76887.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76887">
        <property type="protein sequence ID" value="CTQ76887"/>
        <property type="gene ID" value="LAX5112_04738"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012429">
        <property type="entry name" value="HGSNAT_cat"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07786">
        <property type="entry name" value="HGSNAT_cat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="9"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="48"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="81"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="106"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="130"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="172"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="domain" description="HGSNAT_cat" evidence="2">
        <location>
            <begin position="8"/>
            <end position="230"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ76887.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="321" mass="35220" checksum="61E2D701852868C3" modified="2015-12-09" version="1">MPRTETGRLAVLDLARGVAIVAMAIYHFSWDLSWFAFVDWDVGGAPSWRAFAVSIAASFMILVGISLDLAHHKEIRWRSFWKRFTLIAASAACVSIGTYFAFGDSFVRFGILHCIAVSSLITLPFTRMPLVYALVASAVILTLPNWASSSVFDGDMWIWTGLGTPAMPSVDYVPLAPWTGATLLGVALSKAIRRSAAMERLKQMEFSSLSGRALRWMGRHSLPIYLLHQPLLYGLVWSVTLLGPNMDRTSRSFQTNCAQSCATSIGNEALCVAACRCTLDGLKSENIWQPLLGSPQDPDLQTRMNQLYSACLSAPGTDTIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AR92</accession>
    <name>A0A0M7AR92_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Extracytoplasmic solute receptor protein YiaO</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yiaO_8</name>
        <name evidence="3" type="ORF">LAX5112_05004</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the bacterial solute-binding protein 7 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000039">
        <property type="protein sequence ID" value="CTQ77665.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674127.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000039.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_05004"/>
    <dbReference type="EnsemblBacteria" id="CTQ77665">
        <property type="protein sequence ID" value="CTQ77665"/>
        <property type="gene ID" value="LAX5112_05004"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071702">
        <property type="term" value="P:organic substance transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.190.170">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018389">
        <property type="entry name" value="DctP_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038404">
        <property type="entry name" value="TRAP_DctP_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33376">
        <property type="entry name" value="PTHR33376"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03480">
        <property type="entry name" value="DctP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0675">Receptor</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ77665.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="409" mass="45603" checksum="9731133F4CAA749C" modified="2015-12-09" version="1">MGTYDRIKGVSRRDFFKIAGTYGMSSTLFAAGAFGGVMTAANLARAAESTYNKRFAKEAKHTLKFGAAGFNPQNLLIERAGCLEFARDLEERTDGEIRIEFIGNNQICGQLSCVEKAQQGIIDLYAASTQNSAGGAPYLNVLDYAYMFRSRADQYYFMYSPESQRILREPFEKRHGLKFLFTHAELRGIQLGLSWQDKETVTSIDQLAGTKNRVTGTQLGRIAMNALNLNPVPVAWEETLDGLKQGLIDGAETWASAVAYANMSPVVSQCVDLRFFCGTEHTAMTVSTFDSLSGELQDAVMESSYLTQVHVQAANEAALVNTVGFSNPQLPDTIFAQNNVRVASLSDAEIRKAEEMCSPEFQPQLWEQWRERINGWAGGIDTYQDIYNEVRNNPHTLAENVEPRRWWKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASX2</accession>
    <name>A0A0M7ASX2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04737</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000029">
        <property type="protein sequence ID" value="CTQ76883.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76883">
        <property type="protein sequence ID" value="CTQ76883"/>
        <property type="gene ID" value="LAX5112_04737"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="39"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76883.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="41" mass="4479" checksum="5EB6FED64CABDC02" modified="2015-12-09" version="1">MLRDPVNQEIFATQRPSPWPFVGAIFGAAALVTTLIMAFNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="34" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZMM1</accession>
    <name>A0A0M6ZMM1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Valine--tRNA ligase</fullName>
            <ecNumber evidence="8">6.1.1.9</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">Valyl-tRNA synthetase</fullName>
            <shortName evidence="8">ValRS</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8 13" type="primary">valS</name>
        <name evidence="13" type="ORF">LAX5112_00147</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 8">
            <text>ATP + L-valine + tRNA(Val) = AMP + diphosphate + L-valyl-tRNA(Val)</text>
            <dbReference type="Rhea" id="RHEA:10704"/>
            <dbReference type="Rhea" id="RHEA-COMP:9672"/>
            <dbReference type="Rhea" id="RHEA-COMP:9708"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57762"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78537"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.9"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="8">Monomer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="domain">
        <text evidence="8">The C-terminal coiled-coil domain is crucial for aminoacylation activity.</text>
    </comment>
    <comment type="domain">
        <text evidence="8">ValRS has two distinct active sites: one for aminoacylation and one for editing. The misactivated threonine is translocated from the active site to the editing site.</text>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.9" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64008.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670168.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00147"/>
    <dbReference type="EnsemblBacteria" id="CTQ64008">
        <property type="protein sequence ID" value="CTQ64008"/>
        <property type="gene ID" value="LAX5112_00147"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0002161">
        <property type="term" value="F:aminoacyl-tRNA editing activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004832">
        <property type="term" value="F:valine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006438">
        <property type="term" value="P:valyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd07962">
        <property type="entry name" value="Anticodon_Ia_Val"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.380">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.740.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02004">
        <property type="entry name" value="Val_tRNA_synth_type1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001412">
        <property type="entry name" value="aa-tRNA-synth_I_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002300">
        <property type="entry name" value="aa-tRNA-synth_Ia"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033705">
        <property type="entry name" value="Anticodon_Ia_Val"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013155">
        <property type="entry name" value="M/V/L/I-tRNA-synth_anticd-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010978">
        <property type="entry name" value="tRNA-bd_arm"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009080">
        <property type="entry name" value="tRNAsynth_Ia_anticodon-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037118">
        <property type="entry name" value="Val-tRNA_synth_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019499">
        <property type="entry name" value="Val-tRNA_synth_tRNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009008">
        <property type="entry name" value="Val/Leu/Ile-tRNA-synth_edit"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002303">
        <property type="entry name" value="Valyl-tRNA_ligase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11946">
        <property type="entry name" value="PTHR11946"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08264">
        <property type="entry name" value="Anticodon_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00133">
        <property type="entry name" value="tRNA-synt_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10458">
        <property type="entry name" value="Val_tRNA-synt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00986">
        <property type="entry name" value="TRNASYNTHVAL"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46589">
        <property type="entry name" value="SSF46589"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47323">
        <property type="entry name" value="SSF47323"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50677">
        <property type="entry name" value="SSF50677"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00178">
        <property type="entry name" value="AA_TRNA_LIGASE_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 8 9" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="5 8 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2 8" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 8 9" id="KW-0436">Ligase</keyword>
    <keyword evidence="4 8 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6 8 9" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="tRNA-synt_1" evidence="10">
        <location>
            <begin position="15"/>
            <end position="388"/>
        </location>
    </feature>
    <feature type="domain" description="tRNA-synt_1" evidence="10">
        <location>
            <begin position="427"/>
            <end position="651"/>
        </location>
    </feature>
    <feature type="domain" description="Anticodon_1" evidence="11">
        <location>
            <begin position="702"/>
            <end position="851"/>
        </location>
    </feature>
    <feature type="domain" description="Val_tRNA-synt_C" evidence="12">
        <location>
            <begin position="908"/>
            <end position="972"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="'HIGH' region" evidence="8">
        <location>
            <begin position="45"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="'KMSKS' region" evidence="8">
        <location>
            <begin position="619"/>
            <end position="623"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="622"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001624"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU363035"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF00133"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF08264"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF10458"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="CTQ64008.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="976" mass="109443" checksum="E0267AAC771478E7" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZMT2</accession>
    <name>A0A0M6ZMT2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">scpB_1</name>
        <name evidence="5" type="ORF">LAX5112_00172</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64085.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00172"/>
    <dbReference type="EnsemblBacteria" id="CTQ64085">
        <property type="protein sequence ID" value="CTQ64085"/>
        <property type="gene ID" value="LAX5112_00172"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051304">
        <property type="term" value="P:chromosome separation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005234">
        <property type="entry name" value="ScpB_csome_segregation"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34298">
        <property type="entry name" value="PTHR34298"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04079">
        <property type="entry name" value="SMC_ScpB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00281">
        <property type="entry name" value="TIGR00281"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="1" id="KW-0132">Cell division</keyword>
    <keyword evidence="2" id="KW-0159">Chromosome partition</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="209"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="4">
        <location>
            <begin position="211"/>
            <end position="236"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ64085.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="236" mass="25798" checksum="75740EA3E1662AB9" modified="2015-12-09" version="1">MSELEQLHLDGGAGLGAAPQKASDDLAGLRMVEALLFASSEPLSLEELTLRLPEGADVLGLLEALQEMYAPRGVNVVRLAGKWCFRTAEDLSYLMHRNVEEQRKLSRAALETLAIIAYHQPVTRAEIEEIRGVSTSKGTLDVLLETTWIRMRGRRRTPGRPVTYGTTEQFLIHFGLENVKDLPGLEELKGAGLLDSAIPASFLVPIPSDDAALTEDEDPLEDGTLFDEETDETAGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZNV8</accession>
    <name>A0A0M6ZNV8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Aminopyrimidine aminohydrolase</fullName>
            <ecNumber evidence="1">3.5.99.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">tenA_1</name>
        <name evidence="3" type="ORF">LAX5112_00157</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>4-amino-5-aminomethyl-2-methylpyrimidine + H2O = 4-amino-5-hydroxymethyl-2-methylpyrimidine + NH4(+)</text>
            <dbReference type="Rhea" id="RHEA:31799"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16892"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="ChEBI" id="CHEBI:63416"/>
            <dbReference type="EC" id="3.5.99.2"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>H2O + thiamine = 4-amino-5-hydroxymethyl-2-methylpyrimidine + 5-(2-hydroxyethyl)-4-methylthiazole + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17509"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16892"/>
            <dbReference type="ChEBI" id="CHEBI:17957"/>
            <dbReference type="ChEBI" id="CHEBI:18385"/>
            <dbReference type="EC" id="3.5.99.2"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1">Cofactor biosynthesis; thiamine diphosphate biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the TenA family.</text>
    </comment>
    <dbReference type="EC" id="3.5.99.2" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64037.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00157"/>
    <dbReference type="EnsemblBacteria" id="CTQ64037">
        <property type="protein sequence ID" value="CTQ64037"/>
        <property type="gene ID" value="LAX5112_00157"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00060"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050334">
        <property type="term" value="F:thiaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009228">
        <property type="term" value="P:thiamine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009229">
        <property type="term" value="P:thiamine diphosphate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.910.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016084">
        <property type="entry name" value="Haem_Oase-like_multi-hlx"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004305">
        <property type="entry name" value="Thiaminase-2/PQQC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027574">
        <property type="entry name" value="Thiaminase_II"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03070">
        <property type="entry name" value="TENA_THI-4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48613">
        <property type="entry name" value="SSF48613"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR04306">
        <property type="entry name" value="salvage_TenA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0784">Thiamine biosynthesis</keyword>
    <feature type="domain" description="TENA_THI-4" evidence="2">
        <location>
            <begin position="13"/>
            <end position="217"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU363093"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF03070"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ64037.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="220" mass="24590" checksum="FDA7784491F6B543" modified="2015-12-09" version="1">MKLFERLKADSAPQWASYVDHEFVRQLGKGDLPLSAFKHYLVQDYLFLIQFARAYALGIYKSPTVGDMRQSLEGVKAILDTELDLHLELCGSWGMTREDIEKAPEDTPTMAYTRFVLDAGMSGDLLDLQAALAPCVIGYAEIGSVLMNAGAATDSNPYSRWIQEYGSDAYQDLANGFANWIDETGDVYLTEARYPRLLSLFEKASRLEADFWQMGLDAVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZP09</accession>
    <name>A0A0M6ZP09_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Nickel ABC transporter, nickel/metallophore periplasmic binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">LAX5112_00318</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the bacterial solute-binding protein 5 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64495.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00318"/>
    <dbReference type="EnsemblBacteria" id="CTQ64495">
        <property type="protein sequence ID" value="CTQ64495"/>
        <property type="gene ID" value="LAX5112_00318"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030288">
        <property type="term" value="C:outer membrane-bounded periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030678">
        <property type="entry name" value="Peptide/Ni-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039424">
        <property type="entry name" value="SBP_5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000914">
        <property type="entry name" value="SBP_5_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30290">
        <property type="entry name" value="PTHR30290"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00496">
        <property type="entry name" value="SBP_bac_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002741">
        <property type="entry name" value="MppA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0574">Periplasm</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SBP_bac_5" evidence="4">
        <location>
            <begin position="104"/>
            <end position="512"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ64495.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="601" mass="67998" checksum="64AC9A9E322A682E" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQA4</accession>
    <name>A0A0M6ZQA4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Thioredoxin reductase</fullName>
            <ecNumber evidence="2">1.8.1.9</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">trxB_1</name>
        <name evidence="2" type="ORF">LAX5112_00287</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.8.1.9" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64411.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670265.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00287"/>
    <dbReference type="EnsemblBacteria" id="CTQ64411">
        <property type="protein sequence ID" value="CTQ64411"/>
        <property type="gene ID" value="LAX5112_00287"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004791">
        <property type="term" value="F:thioredoxin-disulfide reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd00038">
        <property type="entry name" value="CAP_ED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018490">
        <property type="entry name" value="cNMP-bd-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000595">
        <property type="entry name" value="cNMP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023753">
        <property type="entry name" value="FAD/NAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00027">
        <property type="entry name" value="cNMP_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07992">
        <property type="entry name" value="Pyr_redox_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00100">
        <property type="entry name" value="cNMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51206">
        <property type="entry name" value="SSF51206"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50042">
        <property type="entry name" value="CNMP_BINDING_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cyclic nucleotide-binding" evidence="1">
        <location>
            <begin position="12"/>
            <end position="131"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64411.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="537" mass="58042" checksum="4EA888763BEC966C" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQT7</accession>
    <name>A0A0M6ZQT7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase</fullName>
            <ecNumber evidence="11">2.4.2.43</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">arnT</name>
        <name evidence="11" type="ORF">LAX5112_00096</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EC" id="2.4.2.43" evidence="11"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63864.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670135.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00096"/>
    <dbReference type="EnsemblBacteria" id="CTQ63864">
        <property type="protein sequence ID" value="CTQ63864"/>
        <property type="gene ID" value="LAX5112_00096"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0103015">
        <property type="term" value="F:4-amino-4-deoxy-L-arabinose transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038731">
        <property type="entry name" value="RgtA/B/C-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13231">
        <property type="entry name" value="PMT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="3 11" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="7 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 11" id="KW-0808">Transferase</keyword>
    <keyword evidence="5 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 9" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="29"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="119"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="147"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="173"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="198"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="221"/>
            <end position="238"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="245"/>
            <end position="267"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="300"/>
            <end position="322"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="329"/>
            <end position="348"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="354"/>
            <end position="372"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="384"/>
            <end position="408"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="414"/>
            <end position="432"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="439"/>
            <end position="460"/>
        </location>
    </feature>
    <feature type="domain" description="PMT_2" evidence="10">
        <location>
            <begin position="94"/>
            <end position="261"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="8">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF13231"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ63864.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="595" mass="63711" checksum="B95CE3F77A45B410" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQZ5</accession>
    <name>A0A0M6ZQZ5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">LAX5112_00087</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63843.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008190698.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00087"/>
    <dbReference type="EnsemblBacteria" id="CTQ63843">
        <property type="protein sequence ID" value="CTQ63843"/>
        <property type="gene ID" value="LAX5112_00087"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070469">
        <property type="term" value="C:respirasome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022900">
        <property type="term" value="P:electron transport chain"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.190">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006885">
        <property type="entry name" value="NADH_UbQ_FeS_4_mit"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038532">
        <property type="entry name" value="NDUFS4-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12219">
        <property type="entry name" value="PTHR12219"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04800">
        <property type="entry name" value="ETC_C1_NDUFA4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0249">Electron transport</keyword>
    <keyword evidence="8" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="4" id="KW-0999">Mitochondrion inner membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0679">Respiratory chain</keyword>
    <keyword evidence="5" id="KW-0809">Transit peptide</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003195"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022660"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022792"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ63843.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="101" mass="11517" checksum="36A771C20ABD9855" modified="2015-12-09" version="1">MVARIYQPAKTATQSGKAKTQRWVLDFEPEVAKSVEPLMGYTSSSDMKQQVRMVFESQEDAVAYAKRQGIPYRVEKSQARVVRGAAYADNFKFDRVAPWTH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZR61</accession>
    <name>A0A0M6ZR61_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Purine nucleoside receptor A</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">tmpC_2</name>
        <name evidence="4" type="ORF">LAX5112_00568</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the BMP lipoprotein family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65269.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00568"/>
    <dbReference type="EnsemblBacteria" id="CTQ65269">
        <property type="protein sequence ID" value="CTQ65269"/>
        <property type="gene ID" value="LAX5112_00568"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003760">
        <property type="entry name" value="PnrA-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02608">
        <property type="entry name" value="Bmp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0675">Receptor</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="domain" description="Bmp" evidence="3">
        <location>
            <begin position="44"/>
            <end position="338"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008610"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF02608"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ65269.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="348" mass="37111" checksum="6CD9A947C830555E" modified="2015-12-09" version="1">MGRPKAGPRMSEDIYVKKILTISTALAGLAFSVAGAMAADIKPAVLYDLGGRFDKSFNEAAYTGAEQFKADYGTEYRDFEIQNDSQREQALRNFAKRGMNPIVAIGFSQANAVEKVAQEFPDTQFAIVDMVVDLPNVRSILFKEHEGSYIVGMLAAMASETDKVGFVGGMDIPLIRKFACGYKQGVMATAPDAEVFENMTGTTGAAWNDPVKGGELAKSQFDSGADVVYHAAGATGIGVLQAAADAGKLGIGVDSNQNGLHPGSVLTSMLKRVDIAVYQAFEDAANDSWSSGFEVLGLKEGGVDWSLDDNNAELVNDEMKAAVEEASNKIISGEIVVHDYMSDQNCPV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRN1</accession>
    <name>A0A0M6ZRN1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative HTH-type transcriptional regulator YjiR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yjiR_1</name>
        <name evidence="3" type="ORF">LAX5112_00447</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">In the C-terminal section; belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64922.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670407.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00447"/>
    <dbReference type="EnsemblBacteria" id="CTQ64922">
        <property type="protein sequence ID" value="CTQ64922"/>
        <property type="gene ID" value="LAX5112_00447"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009058">
        <property type="term" value="P:biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07377">
        <property type="entry name" value="WHTH_GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004839">
        <property type="entry name" value="Aminotransferase_I/II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000524">
        <property type="entry name" value="Tscrpt_reg_HTH_GntR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00155">
        <property type="entry name" value="Aminotran_1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00392">
        <property type="entry name" value="GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00345">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50949">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH gntR-type" evidence="2">
        <location>
            <begin position="13"/>
            <end position="81"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005384"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ64922.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="462" mass="50843" checksum="2DA7D34327248AA2" modified="2015-12-09" version="1">MTIWNALPKNLDRPAYRSLADWISAAIKRGDLADGEKLPPHRHLSYKLAISVQTVSRAYDLLIRRGLVKGEVGRGTYVNARPVETSPPYLPHLIGDQLVDFSNLKPVTGRLHMDCMRRALSGLSSDISESALLSFRPATTLRPYLPAAVSWLEQCGLSCSSDQIIMTNGSSSAMAIALMTAFDGNEVIATDAVCHYPLFRMSQYMNFNLAGLPVDEEGILPAALDEMCRQRSVKTLFLLPNGLGPLALTMGLQRREQLVALARKYDLLIIENDAWGPLQPRRLPPIVALAPERTFYFTSFTKCLLPGLRHGYLIAPEAFASAASNRHLVMDWIATPFMAELAARWIEDGTAEELLSWQKTALKRRNALAHELLAGMPFNSSPNGLHIWLPLPDGWGEDSFIEAARQKGIVVAPGSAFALPEATVAPGVRICLGNMVEEQFIFGMQQLALLCHSKPEGNVFAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRP8</accession>
    <name>A0A0M6ZRP8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_00212</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64194.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670211.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ64194">
        <property type="protein sequence ID" value="CTQ64194"/>
        <property type="gene ID" value="LAX5112_00212"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="21"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="149"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="246"/>
            <end position="281"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="107"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="149"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="246"/>
            <end position="273"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ64194.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="397" mass="41849" checksum="4C4091B437B605BD" modified="2015-12-09" version="1">MQAASAKKPVRENIRDTFTPSRVGVLSWAFAAIVMGSIGMASYKFGSSTSGFAPAGTRVAGLPLPPAGDIGSTASIRSYTSPNAVEVLHLPAQTASQETLGLDQSQISVLQDQIARLRRRLSTISEQNDGYSRRIAALESELSRPVAAIPAQENQTSSTTASFMKDPGVPDLADATDIKRPMAPLPKPHALDDTKTAGLEAPASSDPQNERRPPSRRITIYSGQATPAYEPPIASQAPVKIVQLPSADTSPATTGSIRQADNLLPQDDFDSTPAGTSLRPKIIVPSDGVGTLRGGGSSTLRRSDFGAIVGHYTSLAEAANAWSNFRGQNEERMQDLRPLIKERSADGGVSLLIGPFGNAADAAAACYYLLDVTNVCQPALYNGAPMVSAADFPQQTF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSV8</accession>
    <name>A0A0M6ZSV8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Flp pilus assembly protein TadB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">LAX5112_00537</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65180.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670479.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00537"/>
    <dbReference type="EnsemblBacteria" id="CTQ65180">
        <property type="protein sequence ID" value="CTQ65180"/>
        <property type="gene ID" value="LAX5112_00537"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.81.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018076">
        <property type="entry name" value="T2SS_GspF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042094">
        <property type="entry name" value="T2SS_GspF_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00482">
        <property type="entry name" value="T2SSF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="12"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="112"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="135"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="280"/>
            <end position="300"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="306"/>
            <end position="330"/>
        </location>
    </feature>
    <feature type="domain" description="T2SSF" evidence="8">
        <location>
            <begin position="175"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="47"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="58"/>
            <end position="72"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00482"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ65180.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="339" mass="37437" checksum="69C307862E9F4A19" modified="2015-12-09" version="1">MPVFEQFMTPAITGAAVAILVMFSVGGIIYGLFLPSLSGTKKRDARMSAVSARPQSETQRKTMRDTNRRKKSIQDQLKDFEERQKAKHEKQKNIPLKVKIEQAGLEWEMRHLVLFSVVSAILFFVISLIASGNLLIAAAFTFVGGIGFPRWYIGNKRKRRFNAFLNELPNGIDIIVRGVKAGLPLSDCVKVVAREAREPVATEFRKVTETQVMGVSLAEALSRMPDRVPLPETNFLAIVVSIQQKAGGGLAEALGNLSRVLRQRKAMKAKIKALSSEAKSSAAIIGALPFVVGGILFFIAPDYMMILFTATTGKIIVAGCLFWMFCGIMVMRSMINFDF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZT85</accession>
    <name>A0A0M6ZT85_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Aminomethyltransferase</fullName>
            <ecNumber evidence="6">2.1.2.10</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">gcvT_3</name>
        <name evidence="6" type="ORF">LAX5112_00641</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the GcvT family.</text>
    </comment>
    <dbReference type="EC" id="2.1.2.10" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65472.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00641"/>
    <dbReference type="EnsemblBacteria" id="CTQ65472">
        <property type="protein sequence ID" value="CTQ65472"/>
        <property type="gene ID" value="LAX5112_00641"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004047">
        <property type="term" value="F:aminomethyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1360.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006076">
        <property type="entry name" value="FAD-dep_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032503">
        <property type="entry name" value="FAO_M"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013977">
        <property type="entry name" value="GCV_T_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006222">
        <property type="entry name" value="GCV_T_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029043">
        <property type="entry name" value="GcvT/YgfZ_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027266">
        <property type="entry name" value="TrmE/GcvT_dom1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01266">
        <property type="entry name" value="DAO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16350">
        <property type="entry name" value="FAO_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01571">
        <property type="entry name" value="GCV_T"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08669">
        <property type="entry name" value="GCV_T_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101790">
        <property type="entry name" value="SSF101790"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="DAO" evidence="2">
        <location>
            <begin position="14"/>
            <end position="374"/>
        </location>
    </feature>
    <feature type="domain" description="FAO_M" evidence="5">
        <location>
            <begin position="378"/>
            <end position="430"/>
        </location>
    </feature>
    <feature type="domain" description="GCV_T" evidence="3">
        <location>
            <begin position="434"/>
            <end position="702"/>
        </location>
    </feature>
    <feature type="domain" description="GCV_T_C" evidence="4">
        <location>
            <begin position="731"/>
            <end position="808"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008609"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01266"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01571"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF08669"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF16350"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ65472.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="825" mass="91403" checksum="5EC7D055BAD67A8D" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTG9</accession>
    <name>A0A0M6ZTG9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Trifunctional nucleotide phosphoesterase protein YfkN</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">yfkN_1</name>
        <name evidence="4" type="ORF">LAX5112_00840</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the 5'-nucleotidase family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66018.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670744.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00840"/>
    <dbReference type="EnsemblBacteria" id="CTQ66018">
        <property type="protein sequence ID" value="CTQ66018"/>
        <property type="gene ID" value="LAX5112_00840"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0110165">
        <property type="term" value="C:cellular anatomical entity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016791">
        <property type="term" value="F:phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009166">
        <property type="term" value="P:nucleotide catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07411">
        <property type="entry name" value="MPP_SoxB_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.21.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.780.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008334">
        <property type="entry name" value="5'-Nucleotdase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036907">
        <property type="entry name" value="5'-Nucleotdase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006146">
        <property type="entry name" value="5'-Nucleotdase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006179">
        <property type="entry name" value="5_nucleotidase/apyrase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029052">
        <property type="entry name" value="Metallo-depent_PP-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041829">
        <property type="entry name" value="SoxB_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006311">
        <property type="entry name" value="TAT_signal"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030998">
        <property type="entry name" value="Thiosulf_SoxB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11575">
        <property type="entry name" value="PTHR11575"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02872">
        <property type="entry name" value="5_nucleotid_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01607">
        <property type="entry name" value="APYRASEFAMLY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55816">
        <property type="entry name" value="SSF55816"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56300">
        <property type="entry name" value="SSF56300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR04486">
        <property type="entry name" value="thiosulf_SoxB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00785">
        <property type="entry name" value="5_NUCLEOTIDASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="5_nucleotid_C" evidence="3">
        <location>
            <begin position="396"/>
            <end position="525"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006654"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU362119"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF02872"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ66018.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="565" mass="61937" checksum="8070632220DEC0EC" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUJ3</accession>
    <name>A0A0M6ZUJ3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">GDP-mannose 4,6-dehydratase</fullName>
            <ecNumber evidence="3">4.2.1.47</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">gmd</name>
        <name evidence="5" type="ORF">LAX5112_00971</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the NAD(P)-dependent epimerase/dehydratase family. GDP-mannose 4,6-dehydratase subfamily.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.47" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66445.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008196271.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00971"/>
    <dbReference type="EnsemblBacteria" id="CTQ66445">
        <property type="protein sequence ID" value="CTQ66445"/>
        <property type="gene ID" value="LAX5112_00971"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008446">
        <property type="term" value="F:GDP-mannose 4,6-dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019673">
        <property type="term" value="P:GDP-mannose metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006368">
        <property type="entry name" value="GDP_Man_deHydtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016040">
        <property type="entry name" value="NAD(P)-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43715">
        <property type="entry name" value="PTHR43715"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16363">
        <property type="entry name" value="GDP_Man_Dehyd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0456">Lyase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NAD(P)-bd_dom" evidence="4">
        <location>
            <begin position="5"/>
            <end position="328"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001937"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009263"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF16363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ66445.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="343" mass="38751" checksum="3E25937D063750C5" modified="2015-12-09" version="1">MAKVLITGISGQDGAFLARGLLEKGHEVYGAMRRGSTSKTGRLNELGIRDKINYCTLEVTEFANVQNVLNEIRPDQIYNLAAQSFVADSFQFPHYTSDVNYMGVLNILEAMRILKLDTKLYQASTSEMYGDVLEKPQTEKTPFNPLSPYAISKLGAHSLVVNYRQAYDMFATSGILFNHESELRGLEFVTRKITSWLAEIKLQGKDALPLGNLSSVRDWGYAPEYTDMMIKMLEHDQPDDFVISTNTEYTVRDFLFMAAQEVGFDLHSEGEGLEEKCYDRKTGKLIAYVDPRYFRASDVVYLRGDNAKAQEMLGWKPEILAPEIARRMAIYDLKKAALNTPGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUU6</accession>
    <name>A0A0M6ZUU6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative secreted protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00838</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66012.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670742.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00838"/>
    <dbReference type="EnsemblBacteria" id="CTQ66012">
        <property type="protein sequence ID" value="CTQ66012"/>
        <property type="gene ID" value="LAX5112_00838"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013783">
        <property type="entry name" value="Ig-like_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014756">
        <property type="entry name" value="Ig_E-set"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030995">
        <property type="entry name" value="SoxZ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014880">
        <property type="entry name" value="SoxZ_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08770">
        <property type="entry name" value="SoxZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81296">
        <property type="entry name" value="SSF81296"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR04490">
        <property type="entry name" value="SoxZ_true"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SoxZ" evidence="1">
        <location>
            <begin position="9"/>
            <end position="103"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08770"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66012.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="109" mass="12195" checksum="B8526C11FD4B1F76" modified="2015-12-09" version="1">MASPKPRVKVPKKAEKGEVITIKTLISHPMESGQRKDKKTGELIPRQIINKFTCEFDGQVVFSCDLDPAVSANPYLQFSAKVDNSGTFKFTWVDDNGSVYETEKNITVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUW8</accession>
    <name>A0A0M6ZUW8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">D-ribose-binding periplasmic protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">rbsB_2</name>
        <name evidence="3" type="ORF">LAX5112_00779</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65850.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670700.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00779"/>
    <dbReference type="EnsemblBacteria" id="CTQ65850">
        <property type="protein sequence ID" value="CTQ65850"/>
        <property type="gene ID" value="LAX5112_00779"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025997">
        <property type="entry name" value="SBP_2_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13407">
        <property type="entry name" value="Peripla_BP_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809094" evidence="1">
        <location>
            <begin position="24"/>
            <end position="306"/>
        </location>
    </feature>
    <feature type="domain" description="Peripla_BP_4" evidence="2">
        <location>
            <begin position="29"/>
            <end position="288"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13407"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ65850.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="306" mass="32352" checksum="53E30F6C31CBB646" modified="2015-12-09" version="1">MKIFKLAAAAATGLALLAGTAMADDKPKVGLIMKSLANEFFQNMMAGAEAHQEQRGDYELLAVGMQNETDFESQINAVENFITQGVDAIVVAPADSRAMVRPLKKAMEAGIVVVNFDVALDEDAKKQQGIELAFVGPDNRGGAKLAGDALGKKLGEGGKVVIIEGNPGADNANQRRMGFEDSVAEYKLDLLDSRTAHWETEEANTVFSNMLTAHPDIQGVMAANDSMAIGVVKALESAGRSDIMVVGFDNIPAVSPMIEDGRMLATVDQFGTDMAANAIDLALEVVGGGDELKGWVRTPIELVAAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUY2</accession>
    <name>A0A0M6ZUY2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">LIV-I protein H</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">livH_4</name>
        <name evidence="7" type="ORF">LAX5112_00786</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65870.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670706.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00786"/>
    <dbReference type="EnsemblBacteria" id="CTQ65870">
        <property type="protein sequence ID" value="CTQ65870"/>
        <property type="gene ID" value="LAX5112_00786"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015658">
        <property type="term" value="F:branched-chain amino acid transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06581">
        <property type="entry name" value="TM_PBP1_LivM_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001851">
        <property type="entry name" value="ABC_transp_permease"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043428">
        <property type="entry name" value="LivM-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30482">
        <property type="entry name" value="PTHR30482"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02653">
        <property type="entry name" value="BPD_transp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="7"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="30"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="82"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="109"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="163"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="254"/>
            <end position="275"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="287"/>
            <end position="306"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ65870.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="318" mass="33328" checksum="815F384A3E6C6562" modified="2015-12-09" version="1">MTLKNKWVQLAILAVIILILPAFFPSGYYYRVGALVFVNALSVVGLVILIGYAGQISLGHAGFAGIGAYACALAPVHLGIPPVLAILLGAAISAVLALLIGRPILRLKGYYLGVATLGFGILVSMVLSNERGLTGGPDGMAVPSLGLRPLLRDMGLRLSGGEFWYILNAAALLIGIWIALNLYQSATGRAMRALHGSETAAQTVGIDVARFKLQAFIISAVYASVGGSLLALQNGFITPDVAGFMHSVEMVTMAVLGGVGSVLGATFGAAILTLLPQILTVFHDYEHLLLGLVMILVMIFLPLGLLPSLAARIRWRGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVV4</accession>
    <name>A0A0M6ZVV4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Type VI secretion system lysozyme-like protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01142</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66919.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670996.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01142"/>
    <dbReference type="EnsemblBacteria" id="CTQ66919">
        <property type="protein sequence ID" value="CTQ66919"/>
        <property type="gene ID" value="LAX5112_01142"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007048">
        <property type="entry name" value="IraD/Gp25-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017737">
        <property type="entry name" value="TssE1-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04965">
        <property type="entry name" value="GPW_gp25"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03357">
        <property type="entry name" value="VI_zyme"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GPW_gp25" evidence="1">
        <location>
            <begin position="27"/>
            <end position="113"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04965"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66919.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="137" mass="15620" checksum="7B4D29ABE733926F" modified="2015-12-09" version="1">MAVSLFQRLEGDVLKDEFKSLDQHEAALMDSILTDLRILLNSMAGCCETRPDYGLTDFNAVNQSHKDTAAELCRDIEQQIIKFEPRLSNPVVRTIEDPNRPLEFVFNVEADLKYDTRQVRVRFDSVLDSSGKVRLTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZW32</accession>
    <name>A0A0M6ZW32_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Pca regulon regulatory protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">pcaR</name>
        <name evidence="5" type="ORF">LAX5112_01169</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66989.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671015.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01169"/>
    <dbReference type="EnsemblBacteria" id="CTQ66989">
        <property type="protein sequence ID" value="CTQ66989"/>
        <property type="gene ID" value="LAX5112_01169"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.450.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029016">
        <property type="entry name" value="GAF-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014757">
        <property type="entry name" value="Tscrpt_reg_IclR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005471">
        <property type="entry name" value="Tscrpt_reg_IclR_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09339">
        <property type="entry name" value="HTH_IclR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00346">
        <property type="entry name" value="HTH_ICLR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51077">
        <property type="entry name" value="HTH_ICLR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51078">
        <property type="entry name" value="ICLR_ED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH iclR-type" evidence="3">
        <location>
            <begin position="11"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="domain" description="IclR-ED" evidence="4">
        <location>
            <begin position="74"/>
            <end position="256"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51077"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51078"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ66989.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="264" mass="28732" checksum="D8E0112C898418E1" modified="2015-12-09" version="1">MPDLKDDKRYANTLARGLSVLRVFRPTDNGLGNLEISERTGLPRSTVSRLTFTLCALGYLTHGRHHDKYRLGPSALALGNIAAAAFGFIETATPIMQKLANDTKTLIGVAIQDDGEMLMVKTWRPENSATIWLNVGYRMPVLKSSTGAAYLGALTDEERRKLVALLPGDQATECRSLSIKSQDHLLANGYMYLTGDDRFSASINALATPYRPSEFSEPVTFLSGAAADVLTVARMKESVGPKLAGAVEELRRITGQNYSVLLPV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWE3</accession>
    <name>A0A0M6ZWE3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Purine-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">LAX5112_00777</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the BMP lipoprotein family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65844.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670699.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00777"/>
    <dbReference type="EnsemblBacteria" id="CTQ65844">
        <property type="protein sequence ID" value="CTQ65844"/>
        <property type="gene ID" value="LAX5112_00777"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003760">
        <property type="entry name" value="PnrA-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006311">
        <property type="entry name" value="TAT_signal"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02608">
        <property type="entry name" value="Bmp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809161" evidence="3">
        <location>
            <begin position="35"/>
            <end position="335"/>
        </location>
    </feature>
    <feature type="domain" description="Bmp" evidence="4">
        <location>
            <begin position="53"/>
            <end position="269"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008610"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF02608"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ65844.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="335" mass="36199" checksum="AE30737199B7E2DA" modified="2015-12-09" version="1">MFTVKPFSKVRRGLLAAAMTVTAVAAIPMSAAQAADPIKVAAIYTVPVEQQWVSRIDKALKAAEERGDITYTFSENVANTDYERVMREYAEQGMDLVVGEAFAVERAARKVAAEYPDTAFLMGSSFGPGKPNFAVFDNWIHEPSYLSGMIAGATTESNIIGMVGGYAIPEVNRLMHAFMDGATSVNPDVKFLVTFINSWYDPPKAKEAAFAMIDKGADIMYAERFGVSDAAKEKGLLAIGNVIDTSVDYPGTILSSALWHMEPTIDRAIGLVKSDSFEPADFGPYSFMSYGGGSFIVDESLAPADAVAAAKEKEQEILDGLFRVNVNDSEPKSTM</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWH1</accession>
    <name>A0A0M6ZWH1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Riboflavin synthase</fullName>
            <ecNumber evidence="4">2.5.1.9</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">ribE</name>
        <name evidence="4" type="ORF">LAX5112_01036</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.5.1.9" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66627.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670925.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01036"/>
    <dbReference type="EnsemblBacteria" id="CTQ66627">
        <property type="protein sequence ID" value="CTQ66627"/>
        <property type="gene ID" value="LAX5112_01036"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004746">
        <property type="term" value="F:riboflavin synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd00402">
        <property type="entry name" value="Riboflavin_synthase_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.30.20">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023366">
        <property type="entry name" value="ATP_synth_asu-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001783">
        <property type="entry name" value="Lumazine-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026017">
        <property type="entry name" value="Lumazine-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017938">
        <property type="entry name" value="Riboflavin_synthase-like_b-brl"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21098">
        <property type="entry name" value="PTHR21098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00677">
        <property type="entry name" value="Lum_binding"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000498">
        <property type="entry name" value="Riboflavin_syn_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63380">
        <property type="entry name" value="SSF63380"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00187">
        <property type="entry name" value="ribE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51177">
        <property type="entry name" value="LUMAZINE_BIND"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Lumazine-binding" evidence="3">
        <location>
            <begin position="1"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="repeat" description="Lumazine-binding" evidence="2">
        <location>
            <begin position="1"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="repeat" description="Lumazine-binding" evidence="2">
        <location>
            <begin position="101"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="domain" description="Lumazine-binding" evidence="3">
        <location>
            <begin position="101"/>
            <end position="197"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00524"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51177"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ66627.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="203" mass="21976" checksum="93EA30687B275223" modified="2015-12-09" version="1">MFTGIVTDLGEIQSALDIPAGKRTRIKTLYDTDSFDIGASISCDGVCHTVTAKENSSGGNWFEVESAAETLALTNVSNWKEGQTLNLERSLTMGAELGGHLVLGHVDGVAEITKREDHTDSVYFQFRAPEDVAKFIAKKGSVALNGTSLTVNEVDGLLFSVFLIPHTLEVTNWSNSKAGDRVNLEVDMMARYAARLAEFTKTG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWH9</accession>
    <name>A0A0M6ZWH9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Glycosyltransferase KanE</fullName>
            <ecNumber evidence="4">2.4.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">kanE</name>
        <name evidence="4" type="ORF">LAX5112_01012</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.4.1.-" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66562.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670912.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01012"/>
    <dbReference type="EnsemblBacteria" id="CTQ66562">
        <property type="protein sequence ID" value="CTQ66562"/>
        <property type="gene ID" value="LAX5112_01012"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016757">
        <property type="term" value="F:glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001296">
        <property type="entry name" value="Glyco_trans_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028098">
        <property type="entry name" value="Glyco_trans_4-like_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13579">
        <property type="entry name" value="Glyco_trans_4_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00534">
        <property type="entry name" value="Glycos_transf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glyco_trans_4-like_N" evidence="3">
        <location>
            <begin position="17"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="domain" description="Glycos_transf_1" evidence="2">
        <location>
            <begin position="191"/>
            <end position="346"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="390"/>
            <end position="409"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00534"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF13579"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ66562.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="409" mass="44796" checksum="0408712B5C4008F9" modified="2015-12-09" version="1">MTTPPMRIVHCVRAPVGGIFRHVRDLARCQEALGHKVGLICDSTTGGAFEDAQIEELRSTLSLGLARFPMRRQLTVQDFSATLALYRHIRDLKPTVLHGHGAKGGAYARLIGTYLGLRGQKPARIYSPHGGSLHYHPHRLEGRVYHTLERLLGRITDGLIFVSDYESAAYETKIGSASATNRIVYNGLSKQDFEPVNANEDAADFVFIGMLRDLKGPDLFIEALYNLRLKLGRAPSAILVGDGPDEARYREMVEKLGLTGAVTFTGPMKAREAFKLAKTVVIPSRAEAMPYIILETVAAQRPLIATRAGGIPEIFGKFANRLIEPGHITQLTLAMEDALANPEKKQAEAVEMRPCLAETFSTDLMTDRINSVYLDALGIAPSDVPAQQSELTANQATSLSSVYARSSQR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXT1</accession>
    <name>A0A0M6ZXT1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative glycosyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01454</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67618.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008195637.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01454"/>
    <dbReference type="EnsemblBacteria" id="CTQ67618">
        <property type="protein sequence ID" value="CTQ67618"/>
        <property type="gene ID" value="LAX5112_01454"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035438">
        <property type="term" value="F:cyclic-di-GMP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009875">
        <property type="entry name" value="PilZ_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07238">
        <property type="entry name" value="PilZ"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PilZ" evidence="2">
        <location>
            <begin position="20"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="domain" description="PilZ" evidence="2">
        <location>
            <begin position="123"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07238"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ67618.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="212" mass="23735" checksum="FD01FAD32C38093D" modified="2015-12-09" version="1">MSAGLATAAPEGSKSLQVTDRRRHQRVQVNILGRFMLEDRREYPCQVIDMSPGGMAMITPVSGKVGERVVAYLDHLSRVEGRISRLIDGGFAVELRNTVRKRDKIANVLTWLANRDELNLPEDRRHDRFVPKNQMTKMILPDGTEHVCRIFDVSLSGAAIATDILPEMGDQITLGKMRARVVRQIEGGIAVEFAAVQSRELLEHHITTPESK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZY59</accession>
    <name>A0A0M6ZY59_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Probable membrane transporter protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">LAX5112_00977</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the 4-toluene sulfonate uptake permease (TSUP) (TC 2.A.102) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66463.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670889.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00977"/>
    <dbReference type="EnsemblBacteria" id="CTQ66463">
        <property type="protein sequence ID" value="CTQ66463"/>
        <property type="gene ID" value="LAX5112_00977"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002781">
        <property type="entry name" value="TM_pro_TauE-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01925">
        <property type="entry name" value="TauE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="6"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="31"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="74"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="102"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="131"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="172"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="229"/>
            <end position="250"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363041"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ66463.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="251" mass="26360" checksum="494B72699341E172" modified="2015-12-09" version="1">MNSPELYLIATAVFVLAGVVKGTVGMGLPAISLGLMTVFVGVEVAIVLILWPTFLTNLWQAVYGGHLKALTKRLWPFLAAASATLILGTFILTTAPQGVPDLVLGALMIAYAVPMLAGLRLHIPSEWERPIGVVLGALNGIFSGLTGAYTVPGVMYLQALGLDRDELVQAMGLLFLSATVMLALALGGFGLLEFEGAVQSLLLTVPALAGVCMGQRLRGRLSDAGFRRAFLGAILCLGVYLVPLGIWRLAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYG8</accession>
    <name>A0A0M6ZYG8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Exodeoxyribonuclease 8</fullName>
            <ecNumber evidence="2">3.1.11.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">recE</name>
        <name evidence="2" type="ORF">LAX5112_01270</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.11.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67212.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671103.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67212">
        <property type="protein sequence ID" value="CTQ67212"/>
        <property type="gene ID" value="LAX5112_01270"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.320.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011604">
        <property type="entry name" value="PDDEXK-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024432">
        <property type="entry name" value="Put_RecE_PDDEXK-like_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12684">
        <property type="entry name" value="DUF3799"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF3799" evidence="1">
        <location>
            <begin position="67"/>
            <end position="284"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12684"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67212.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="324" mass="36934" checksum="B073E64005D17464" modified="2015-12-09" version="1">MKAIKWHEGMQITEPGIYEGIPLEEYHGNRDLFDGPSISKSSLKWLLPLHGGSPKAFWGRWKWNPDRVEPTSSDALVFGKAAHCLLLGDEVFSEQFIVEPEKYFNEKTEKEVKWSNNANACKDWHKAQADAGLTVIKADQLQMIRKIAEDAAKYDLVKQGILNGEIERTLCLKDPETGIWVTTRPDARPMPGVYSDLKTTSSLDEEFLSRQLFDAGYYLQGGMTKLVCEALGLPFEEFYLVYVLKDDVPDTTHVPISGTAIERGERSVRWCLKTIRQCLDAGEWHGARPFNEGNQPIYMKPWAADRLDEFLDREERSYPQEEAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYJ4</accession>
    <name>A0A0M6ZYJ4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">MerR family regulatory protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01024</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66593.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670918.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01024"/>
    <dbReference type="EnsemblBacteria" id="CTQ66593">
        <property type="protein sequence ID" value="CTQ66593"/>
        <property type="gene ID" value="LAX5112_01024"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009061">
        <property type="entry name" value="DNA-bd_dom_put_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000551">
        <property type="entry name" value="MerR-type_HTH_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13411">
        <property type="entry name" value="MerR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00422">
        <property type="entry name" value="HTH_MERR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46955">
        <property type="entry name" value="SSF46955"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50937">
        <property type="entry name" value="HTH_MERR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH merR-type" evidence="2">
        <location>
            <begin position="13"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="100"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="100"/>
            <end position="114"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50937"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ66593.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="200" mass="22273" checksum="C34E1EC522519B15" modified="2015-12-09" version="1">MSSQDKSPDAFRTISEVAEDLDLPQHVLRFWETRFSQIKPLKRGGGRRYYRPDDVELLKGIRHLLYGEGYTIKGVQRILKEQGPKFVMQIWRDDADPLTVSQQITSSAPAPLTEETTPGETAGRAMPLGSVPHDVIDDEADKPADGQGGSGFGILSRLRGEKPESAVTGPAKAISKEDIRRLQSTLFELLECKRTLDRAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZD1</accession>
    <name>A0A0M6ZZD1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Octaprenyl-diphosphate synthase</fullName>
            <ecNumber evidence="3">2.5.1.90</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ispB</name>
        <name evidence="3" type="ORF">LAX5112_01481</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the FPP/GGPP synthase family.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.90" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67687.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671294.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01481"/>
    <dbReference type="EnsemblBacteria" id="CTQ67687">
        <property type="protein sequence ID" value="CTQ67687"/>
        <property type="gene ID" value="LAX5112_01481"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0106350">
        <property type="term" value="F:octaprenyl pyrophosphate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008299">
        <property type="term" value="P:isoprenoid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00685">
        <property type="entry name" value="Trans_IPPS_HT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.600.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008949">
        <property type="entry name" value="Isoprenoid_synthase_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000092">
        <property type="entry name" value="Polyprenyl_synt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033749">
        <property type="entry name" value="Polyprenyl_synt_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00348">
        <property type="entry name" value="polyprenyl_synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48576">
        <property type="entry name" value="SSF48576"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00723">
        <property type="entry name" value="POLYPRENYL_SYNTHASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0460">Magnesium</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU004466"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ67687.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="338" mass="36148" checksum="BC7BA9C7B2207DB6" modified="2015-12-09" version="1">MAVVATLSDNETPRASIQPLVDLVAPGMADVNELILSKAGSNVDLIPEIAKHLISSGGKRLRPMLTLAFADMFGYQGNGHVILAASVEFMHTATLLHDDVVDESDMRRGKLAARKLWGNQASVLVGDYLLGQAFKMMVDTGSLEALRILSEASAIIAEGEVLQLGASKNIETTEAEYLRVIEAKTAALFAAAAEVGPEIAGQNDVMRKAARTYGLELGYAFQMVDDALDYGGSSADLGKDVGDDFREGKITLPVVLAVARGTDQDRAFWKRCMEGDNVTDDDLAEAIELLKKFDAIAETVQRARTYGDNALKALDQLPACAHTDALADAVAFCIARVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZL0</accession>
    <name>A0A0M6ZZL0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Malonyl-CoA decarboxylase (MCD)</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01167</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66983.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671013.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01167"/>
    <dbReference type="EnsemblBacteria" id="CTQ66983">
        <property type="protein sequence ID" value="CTQ66983"/>
        <property type="gene ID" value="LAX5112_01167"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050080">
        <property type="term" value="F:malonyl-CoA decarboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006633">
        <property type="term" value="P:fatty acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.140.90">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.630.150">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038917">
        <property type="entry name" value="Malonyl_CoA_deC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007956">
        <property type="entry name" value="Malonyl_CoA_deC_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042303">
        <property type="entry name" value="Malonyl_CoA_deC_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035372">
        <property type="entry name" value="MCD_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038351">
        <property type="entry name" value="MCD_N_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR28641">
        <property type="entry name" value="PTHR28641"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05292">
        <property type="entry name" value="MCD"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17408">
        <property type="entry name" value="MCD_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MCD_N" evidence="2">
        <location>
            <begin position="77"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="domain" description="MCD" evidence="1">
        <location>
            <begin position="161"/>
            <end position="308"/>
        </location>
    </feature>
    <feature type="domain" description="MCD" evidence="1">
        <location>
            <begin position="318"/>
            <end position="379"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF05292"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF17408"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ66983.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="425" mass="47334" checksum="A1CF380F56B077BB" modified="2015-12-09" version="1">MTLLADLLSSIFDRRYRTFLPGSSDNRPMEELTAALLGASGEVSGSTIARIILDRYETAEEDEKLSFFRHLAEDMAVSPQDLRAALETYEKGQTKTSYETLVRAAEPRRQELIRRLNQVPDATRSLVAMRADLLRFSKEDDALQALNVDFGHLFASWFNRGFLVLRPINWESPANILEKIIEYEAVHAIDSWDDLRRRLQPADRRCFAFFHPTMPDEPLIFVEVALTKGVPSSIQGLLSEEREHIEAEDANTAVFYSISNCQKGLAGISFGNSLIKQVAADLSLELPGLKTFVTLSPIPGFRNWIDKNDLGPLPDDPKQLKALAAHYLIAAKRRNGLPLDPVARFHLGNGAQVYQVHADADLSEKGQQQSAGVMVNYLYNLSKVSQNHERFATSHEIAASSDIKSLSAAAEKTLNRSPTDGQPAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A031</accession>
    <name>A0A0M7A031_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">AhpC/TSA family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01571</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67921.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671359.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01571"/>
    <dbReference type="EnsemblBacteria" id="CTQ67921">
        <property type="protein sequence ID" value="CTQ67921"/>
        <property type="gene ID" value="LAX5112_01571"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016209">
        <property type="term" value="F:antioxidant activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000866">
        <property type="entry name" value="AhpC/TSA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013766">
        <property type="entry name" value="Thioredoxin_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00578">
        <property type="entry name" value="AhpC-TSA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51352">
        <property type="entry name" value="THIOREDOXIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Thioredoxin" evidence="1">
        <location>
            <begin position="2"/>
            <end position="165"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67921.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="178" mass="19606" checksum="8F5EA15EC8CB8130" modified="2015-12-09" version="1">MLIPRQTVPALTVETLGGGSFDLSAETAEFATLVVFFRGLHCPICATYLKELGRLLPDLKERGVEVIALSSDDQERTQQMADKVGFDDLKFGYGLPLTMAKDWGLYISTGRGKTSIGIEEPDLFSEPGVFLVKPDGTLYFASVQTMPFVRPHFQEMLGALDFVKKNDYPARGEYTGAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0P7</accession>
    <name>A0A0M7A0P7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Ribosomal-protein-alanine acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01605</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68016.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671383.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01605"/>
    <dbReference type="EnsemblBacteria" id="CTQ68016">
        <property type="protein sequence ID" value="CTQ68016"/>
        <property type="gene ID" value="LAX5112_01605"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015797">
        <property type="entry name" value="NUDIX_hydrolase-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55811">
        <property type="entry name" value="SSF55811"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="3"/>
            <end position="153"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68016.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="383" mass="42293" checksum="719D80C0547AEA8E" modified="2015-12-09" version="1">MRLKLRAARAYDAPALTKIMHDAKAAWGYPEDLMRQWRKHWQIIPEMITDHELIVAEDAGHAIAFSGLKQNTPRSVTLEYLYVSPSAQKKGIGTLLLQRSEDRARQFGCDKVTLRSEVNAGGFYERRQYKTVGQEPSKMAPGRFMPLMEKTLAGNVVPISEITLSVSSNPWDFETDNAAEISAHFAEQQRRIPELWNGRTLKLTSHSFDSGTLTGVCTECSYAAFLTWRDWGAPDLTTFNLFGSAVIRSSDGALLYGVMSAHTATAGQIYPPGGNLDPSDVGPTGLIDIRGAIARELEEETGLRLNDLLPGDLLIVFDGARISVAQVFDSDQPAEALRHDIIAHSMASEEKELADIRIIRSILDLTDPAVASYARALGKHILR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0Q3</accession>
    <name>A0A0M7A0Q3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01793</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68575.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671518.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01793"/>
    <dbReference type="EnsemblBacteria" id="CTQ68575">
        <property type="protein sequence ID" value="CTQ68575"/>
        <property type="gene ID" value="LAX5112_01793"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010865">
        <property type="entry name" value="DUF1499"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07386">
        <property type="entry name" value="DUF1499"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68575.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="149" mass="16272" checksum="A09EA88CC4820A5C" modified="2015-12-09" version="1">MNGLQLSLGSSWFWGLVALVAVLCGVGAVLFFRFVPVTRADVPAVTTRFAAGDTELAGGFYAVRPLEAVDLSALERQISQTARSRRVSGSLDDLPLVFVHRSLVWGFPDVTQVWVEGDFVHIYSHLVYGGSDLGVNRDRMVGWFEALGI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A181</accession>
    <name>A0A0M7A181_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Carbon starvation induced regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">csiR_3</name>
        <name evidence="5" type="ORF">LAX5112_01419</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67533.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671250.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01419"/>
    <dbReference type="EnsemblBacteria" id="CTQ67533">
        <property type="protein sequence ID" value="CTQ67533"/>
        <property type="gene ID" value="LAX5112_01419"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07377">
        <property type="entry name" value="WHTH_GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.530">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011711">
        <property type="entry name" value="GntR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008920">
        <property type="entry name" value="TF_FadR/GntR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000524">
        <property type="entry name" value="Tscrpt_reg_HTH_GntR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07729">
        <property type="entry name" value="FCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00392">
        <property type="entry name" value="GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00895">
        <property type="entry name" value="FCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00345">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48008">
        <property type="entry name" value="SSF48008"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50949">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH gntR-type" evidence="4">
        <location>
            <begin position="6"/>
            <end position="73"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ67533.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="236" mass="26370" checksum="0F15E953783E180F" modified="2015-12-09" version="1">MPPQRGTAKTVAYEDLKRAILTLERKPGSALEETELCDLYGLSRTPLREVLQQLSGDGYVTLQLNRGARVSDMTHFTLRDFFLAAPLIYSAILRLAAQNATSMQIDELKAAQDAFREAMDTGDVTVRALTNDRFHRITGRMAGNSYLMASLDRLLIDHTRIGMTFFRQNRGAKDERLKLASAQHDEMIVAIEDGDEDRAAELALEHWALSRDQIELFVMPPGLEAPLGQPPKLKSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1J3</accession>
    <name>A0A0M7A1J3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Clan AA aspartic protease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01922</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68885.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671614.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01922"/>
    <dbReference type="EnsemblBacteria" id="CTQ68885">
        <property type="protein sequence ID" value="CTQ68885"/>
        <property type="gene ID" value="LAX5112_01922"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004190">
        <property type="term" value="F:aspartic-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd05483">
        <property type="entry name" value="retropepsin_like_bacteria"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.70.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001969">
        <property type="entry name" value="Aspartic_peptidase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011969">
        <property type="entry name" value="Clan_AA_Asp_peptidase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021109">
        <property type="entry name" value="Peptidase_aspartic_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034122">
        <property type="entry name" value="Retropepsin-like_bacterial"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50630">
        <property type="entry name" value="SSF50630"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02281">
        <property type="entry name" value="clan_AA_DTGA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00141">
        <property type="entry name" value="ASP_PROTEASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0645">Protease</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="46"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="70"/>
            <end position="90"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68885.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="237" mass="25514" checksum="4E32F17E37D0B798" modified="2015-12-09" version="1">MSGRGQYRGFAIVILITVMAAAVFYLFFGDPTDPENLNFDDTGPRVVALSTLAFVFLASFIFGQPKVRDIIQGTLFWGGLCALLVVGYTYRTDLVQAGYRVLGSLAPGMAVTQADGSILIVRDAGGHFVVDGRANGRKTSFLLDTGASAVVLTYQDAARAGIPERDLSFTVPVATANGRTLVAPIRIDNLTIGDHTLRNVRAFVARDGSLGQSLLGMTALDRLRSWRIEGDRLIMNP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1X2</accession>
    <name>A0A0M7A1X2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01510</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67764.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01510"/>
    <dbReference type="EnsemblBacteria" id="CTQ67764">
        <property type="protein sequence ID" value="CTQ67764"/>
        <property type="gene ID" value="LAX5112_01510"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="19"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="47"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="77"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="118"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="153"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="332"/>
            <end position="352"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ67764.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="352" mass="37466" checksum="A06353335CF577C4" modified="2015-12-09" version="1">MIHPDAVSDPLTGPLHRSFLVGCFFSGAVALFVLPLHLALAGAPHSAAVLMLAWMLGQWPLALYLSRSGNLERAITISSVLFAVFTGVICALTGGAQSFAVIWLLIPCLEAAFAGQRRTAVITTGFCAAVYAGLFFLPAGGPIAFGLPATLDPVATLAAVLYAGLLACRLISDRSRTKTLIKNATEDFQTMGQAVSGVVCEVQSNGDMRLLGGPARRLFGPAFASNDPDWIFTRLHVTDRPAYLTRLSEARHDGLASELVLRVRRFHEHMEENGAPNFTAMTVRLIPAQAFRAGARDQCETQPVLVAIDPVTSETGGGAPVEILDNIEQLPEFTPDVSSESIPAQTARAKSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2A0</accession>
    <name>A0A0M7A2A0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Glycerol-3-phosphate acyltransferase</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10">Acyl-PO4 G3P acyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="10">Acyl-phosphate--glycerol-3-phosphate acyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="10">G3P acyltransferase</fullName>
            <shortName evidence="10">GPAT</shortName>
            <ecNumber evidence="10">2.3.1.275</ecNumber>
        </alternativeName>
        <alternativeName>
            <fullName evidence="10">Lysophosphatidic acid synthase</fullName>
            <shortName evidence="10">LPA synthase</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="10 12" type="primary">plsY</name>
        <name evidence="12" type="ORF">LAX5112_01863</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>an acyl phosphate + sn-glycerol 3-phosphate = a 1-acyl-sn-glycero-3-phosphate + phosphate</text>
            <dbReference type="Rhea" id="RHEA:34075"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57597"/>
            <dbReference type="ChEBI" id="CHEBI:57970"/>
            <dbReference type="ChEBI" id="CHEBI:59918"/>
            <dbReference type="EC" id="2.3.1.275"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="10">Lipid metabolism; phospholipid metabolism.</text>
    </comment>
    <comment type="subunit">
        <text evidence="10">Probably interacts with PlsX.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="10">Cell membrane</location>
            <topology evidence="10">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="10">Belongs to the PlsY family.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.275" evidence="10"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68721.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671566.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01863"/>
    <dbReference type="EnsemblBacteria" id="CTQ68721">
        <property type="protein sequence ID" value="CTQ68721"/>
        <property type="gene ID" value="LAX5112_01863"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00085"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043772">
        <property type="term" value="F:acyl-phosphate glycerol-3-phosphate acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008654">
        <property type="term" value="P:phospholipid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01043">
        <property type="entry name" value="PlsY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003811">
        <property type="entry name" value="G3P_acylTferase_PlsY"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30309">
        <property type="entry name" value="PTHR30309"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02660">
        <property type="entry name" value="G3P_acyltransf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01207">
        <property type="entry name" value="G3P_acyltransf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00023">
        <property type="entry name" value="TIGR00023"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="12" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="1 10" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="2 10" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="6 10" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="7 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="8 10" id="KW-0594">Phospholipid biosynthesis</keyword>
    <keyword evidence="9 10" id="KW-1208">Phospholipid metabolism</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 10 12" id="KW-0808">Transferase</keyword>
    <keyword evidence="4 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 10" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="12"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="63"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="89"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="119"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="160"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="198"/>
            <end position="220"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023209"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023264"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ68721.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="220" mass="23496" checksum="48108D8FA270573F" modified="2015-12-09" version="1">MPDPISWEFAWPYYLAALAFGYLLGTIPFGLILTKLGGHGDIREIGSGNIGTTNVLRTGSKKLAAATLLGDALKGTVAVLIAARFGPDTALIAGFGAFLGHLFPVWLKFKGGKGVATYLGILLGLYWPMFLIAALTWVGMAVVFRYSSLSALTASAVTPIILYFGFSQFQLGEMFLVFTLLLWAKHHENIGRLLKGQESKIGKKSRPAEASASEPSPGDG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2N3</accession>
    <name>A0A0M7A2N3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Patatin-like phospholipase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_01994</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69129.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671696.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ69129">
        <property type="protein sequence ID" value="CTQ69129"/>
        <property type="gene ID" value="LAX5112_01994"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016042">
        <property type="term" value="P:lipid catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016035">
        <property type="entry name" value="Acyl_Trfase/lysoPLipase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002641">
        <property type="entry name" value="PNPLA_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01734">
        <property type="entry name" value="Patatin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52151">
        <property type="entry name" value="SSF52151"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51635">
        <property type="entry name" value="PNPLA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0442">Lipid degradation</keyword>
    <keyword evidence="1 2" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PNPLA" evidence="3">
        <location>
            <begin position="9"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="GXGXXG" evidence="2">
        <location>
            <begin position="13"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="GXSXG" evidence="2">
        <location>
            <begin position="41"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="DGA/G" evidence="2">
        <location>
            <begin position="195"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="2">
        <location>
            <position position="43"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="2">
        <location>
            <position position="195"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01161"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51635"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ69129.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="337" mass="38227" checksum="D4FA10F6B06B164E" modified="2015-12-09" version="1">MSDPKKINLALQGGGAHGAFTWGVLDWFLEDSRFELDGITGTSAGAMNAVVLASGLEVGGEEGARATLEAFWREVSTEARTSPIQRSPLDVLLGHWSLDYSPSYLYFDVLSRFASPYEFNPLNFNPLRDIVERTVDFEKVHCCSGLKLFIAATNVFTGKIRVFSEKEVTLDAVMASACLPQLYQAVEIDGEPYWDGGFMGNPPLYPLFYETETSDVVLIQINPIERREVPRTAREIVNRLNEITFNSTLLRELRAIDFVTRLIEEGKLDRKEYTKVHLHRIAAEELKPLQASSKMNAEWDFLTHLRDVGRQTAKEWLDRHFDDIGERSTIDLRKEFA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="34" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2P3</accession>
    <name>A0A0M7A2P3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Bifunctional uridylyltransferase/uridylyl-removing enzyme</fullName>
            <shortName evidence="7">UTase/UR</shortName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Bifunctional [protein-PII] modification enzyme</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">Bifunctional nitrogen sensor protein</fullName>
        </alternativeName>
        <domain>
            <recommendedName>
                <fullName evidence="7">[Protein-PII] uridylyltransferase</fullName>
                <shortName evidence="7">PII uridylyltransferase</shortName>
                <shortName evidence="7">UTase</shortName>
                <ecNumber evidence="7">2.7.7.59</ecNumber>
            </recommendedName>
        </domain>
        <domain>
            <recommendedName>
                <fullName evidence="7">[Protein-PII]-UMP uridylyl-removing enzyme</fullName>
                <shortName evidence="7">UR</shortName>
                <ecNumber evidence="7">3.1.4.-</ecNumber>
            </recommendedName>
        </domain>
    </protein>
    <gene>
        <name evidence="7" type="primary">glnD</name>
        <name evidence="10" type="ORF">LAX5112_01998</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen metabolism.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>[protein-PII]-L-tyrosine + UTP = [protein-PII]-uridylyl-L-tyrosine + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:13673"/>
            <dbReference type="Rhea" id="RHEA-COMP:12147"/>
            <dbReference type="Rhea" id="RHEA-COMP:12148"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:46398"/>
            <dbReference type="ChEBI" id="CHEBI:46858"/>
            <dbReference type="ChEBI" id="CHEBI:90602"/>
            <dbReference type="EC" id="2.7.7.59"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>[protein-PII]-uridylyl-L-tyrosine + H2O = [protein-PII]-L-tyrosine + H(+) + UMP</text>
            <dbReference type="Rhea" id="RHEA:48600"/>
            <dbReference type="Rhea" id="RHEA-COMP:12147"/>
            <dbReference type="Rhea" id="RHEA-COMP:12148"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:46858"/>
            <dbReference type="ChEBI" id="CHEBI:57865"/>
            <dbReference type="ChEBI" id="CHEBI:90602"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="7">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="activity regulation">
        <text evidence="7">Uridylyltransferase (UTase) activity is inhibited by glutamine, while glutamine activates uridylyl-removing (UR) activity.</text>
    </comment>
    <comment type="domain">
        <text evidence="7">Has four distinct domains: an N-terminal nucleotidyltransferase (NT) domain responsible for UTase activity, a central HD domain that encodes UR activity, and two C-terminal ACT domains that seem to have a role in glutamine sensing.</text>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the GlnD family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.59" evidence="7"/>
    <dbReference type="EC" id="3.1.4.-" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69139.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008191432.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01998"/>
    <dbReference type="EnsemblBacteria" id="CTQ69139">
        <property type="protein sequence ID" value="CTQ69139"/>
        <property type="gene ID" value="LAX5112_01998"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008773">
        <property type="term" value="F:[protein-PII] uridylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008081">
        <property type="term" value="F:phosphoric diester hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006807">
        <property type="term" value="P:nitrogen compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006808">
        <property type="term" value="P:regulation of nitrogen utilization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00077">
        <property type="entry name" value="HDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.460.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00277">
        <property type="entry name" value="PII_uridylyl_transf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045865">
        <property type="entry name" value="ACT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002912">
        <property type="entry name" value="ACT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003607">
        <property type="entry name" value="HD/PDEase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006674">
        <property type="entry name" value="HD_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043519">
        <property type="entry name" value="NT_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013546">
        <property type="entry name" value="PII_UdlTrfase/GS_AdlTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002934">
        <property type="entry name" value="Polymerase_NTP_transf_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010043">
        <property type="entry name" value="UTase/UR"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47320">
        <property type="entry name" value="PTHR47320"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08335">
        <property type="entry name" value="GlnD_UR_UTase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01966">
        <property type="entry name" value="HD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01909">
        <property type="entry name" value="NTP_transf_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006288">
        <property type="entry name" value="PII_uridyltransf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00471">
        <property type="entry name" value="HDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55021">
        <property type="entry name" value="SSF55021"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81301">
        <property type="entry name" value="SSF81301"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01693">
        <property type="entry name" value="UTase_glnD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51671">
        <property type="entry name" value="ACT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51831">
        <property type="entry name" value="HD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5 7" id="KW-0460">Magnesium</keyword>
    <keyword evidence="6 7" id="KW-0511">Multifunctional enzyme</keyword>
    <keyword evidence="2 7" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <keyword evidence="1 7 10" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="HD" evidence="9">
        <location>
            <begin position="504"/>
            <end position="626"/>
        </location>
    </feature>
    <feature type="domain" description="ACT" evidence="8">
        <location>
            <begin position="744"/>
            <end position="826"/>
        </location>
    </feature>
    <feature type="domain" description="ACT" evidence="8">
        <location>
            <begin position="855"/>
            <end position="935"/>
        </location>
    </feature>
    <feature type="region of interest" description="Uridylyltransferase" evidence="7">
        <location>
            <begin position="1"/>
            <end position="385"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023268"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51671"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51831"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ69139.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="945" mass="106906" checksum="B92CFD24ECD39F00" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3C8</accession>
    <name>A0A0M7A3C8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Superfamily II RNA helicase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_02169</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69575.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02169"/>
    <dbReference type="EnsemblBacteria" id="CTQ69575">
        <property type="protein sequence ID" value="CTQ69575"/>
        <property type="gene ID" value="LAX5112_02169"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004386">
        <property type="term" value="F:helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0347">Helicase</keyword>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="2">
        <location>
            <begin position="43"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase C-terminal" evidence="3">
        <location>
            <begin position="198"/>
            <end position="358"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="858"/>
            <end position="1051"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="958"/>
            <end position="1000"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1013"/>
            <end position="1028"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ69575.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="1051" mass="114542" checksum="C801C2AB3BDAE421" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3E6</accession>
    <name>A0A0M7A3E6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Probable lipid II flippase MurJ</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8 10" type="primary">murJ</name>
        <name evidence="10" type="ORF">LAX5112_01997</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8 9">Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.</text>
    </comment>
    <comment type="pathway">
        <text evidence="8">Cell wall biogenesis; peptidoglycan biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cell inner membrane</location>
            <topology evidence="8">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="8 9">Belongs to the MurJ/MviN family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69137.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671697.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01997"/>
    <dbReference type="EnsemblBacteria" id="CTQ69137">
        <property type="protein sequence ID" value="CTQ69137"/>
        <property type="gene ID" value="LAX5112_01997"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00219"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015648">
        <property type="term" value="F:lipid-linked peptidoglycan transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008360">
        <property type="term" value="P:regulation of cell shape"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd13123">
        <property type="entry name" value="MATE_MurJ_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02078">
        <property type="entry name" value="MurJ_MviN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004268">
        <property type="entry name" value="MurJ"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03023">
        <property type="entry name" value="MurJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002869">
        <property type="entry name" value="MviN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01806">
        <property type="entry name" value="VIRFACTRMVIN"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01695">
        <property type="entry name" value="murJ_mviN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="2 8 9" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 8 9" id="KW-0133">Cell shape</keyword>
    <keyword evidence="8 9" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="7 8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="5 8 9" id="KW-0573">Peptidoglycan synthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="8 9" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="26"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="90"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="134"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="161"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="189"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="233"/>
            <end position="254"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="274"/>
            <end position="294"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="314"/>
            <end position="332"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="352"/>
            <end position="369"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="389"/>
            <end position="407"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="413"/>
            <end position="433"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="445"/>
            <end position="466"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="478"/>
            <end position="500"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02078"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRNR" id="PIRNR002869"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ69137.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="520" mass="55779" checksum="BA3B7482BF9EDEE8" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A575</accession>
    <name>A0A0M7A575_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Regulatory protein AsnC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">asnC_1</name>
        <name evidence="5" type="ORF">LAX5112_02420</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70228.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672029.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02420"/>
    <dbReference type="EnsemblBacteria" id="CTQ70228">
        <property type="protein sequence ID" value="CTQ70228"/>
        <property type="gene ID" value="LAX5112_02420"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000485">
        <property type="entry name" value="AsnC-type_HTH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019888">
        <property type="entry name" value="Tscrpt_reg_AsnC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019887">
        <property type="entry name" value="Tscrpt_reg_AsnC/Lrp_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01037">
        <property type="entry name" value="AsnC_trans_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13404">
        <property type="entry name" value="HTH_AsnC-type"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00033">
        <property type="entry name" value="HTHASNC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00344">
        <property type="entry name" value="HTH_ASNC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50956">
        <property type="entry name" value="HTH_ASNC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH asnC-type" evidence="4">
        <location>
            <begin position="1"/>
            <end position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50956"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ70228.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="141" mass="15815" checksum="14D0E3261C820427" modified="2015-12-09" version="1">MDDLDHRLLHLLTRDARASVTDLAAALQVSRGTVQNRIDRLLHQKVIHRFTVELGQSEEDHQISAFTLIRLKADDGRATQAALRRIDAITDIHTLSGAFDLVAELRVRSLKLLDQTLDQIRALPEVAETQSHIRLASAGKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5A5</accession>
    <name>A0A0M7A5A5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 12">Heme exporter protein B</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="primary">ccmB</name>
        <name evidence="14" type="ORF">LAX5112_02253</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 12">Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cell inner membrane</location>
            <topology evidence="3">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 12">Belongs to the CcmB/CycW/HelB family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69797.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02253"/>
    <dbReference type="EnsemblBacteria" id="CTQ69797">
        <property type="protein sequence ID" value="CTQ69797"/>
        <property type="gene ID" value="LAX5112_02253"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015232">
        <property type="term" value="F:heme transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017004">
        <property type="term" value="P:cytochrome complex assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003544">
        <property type="entry name" value="Cyt_c_biogenesis_CcmB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026031">
        <property type="entry name" value="Cyt_c_CcmB_bac"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30070">
        <property type="entry name" value="PTHR30070"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03379">
        <property type="entry name" value="CcmB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002764">
        <property type="entry name" value="CcmB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01190">
        <property type="entry name" value="ccmB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 12" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="7 12" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="12" id="KW-0201">Cytochrome c-type biogenesis</keyword>
    <keyword evidence="11 12 13" id="KW-0472">Membrane</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9 13" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="10 13" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6 12" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="21"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="47"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="93"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="126"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="160"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="192"/>
            <end position="218"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002442"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00010544"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00016452"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022519"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRNR" id="PIRNR002764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="CTQ69797.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="223" mass="23002" checksum="BEEE7887093087C0" modified="2015-12-09" version="1">MTGWAMALFQRDLRLSVRVGGSALVGVLFFLAVVTVIPFGVGPDLNLLARIGPAILWIGALLATLLGLDRLFQADRDDGTLDLMLMAGRPLELVVLIKCLAHWTATGLPLVVAAPVLGIFLNLDPVSMAAVTATLLVGTPALTLIGAIGASLTVSLRRGGLLLAVLVVPLAIPVLIFGVSSADAAIRDPVPFLTPFLILCALSLIAAVVGPIASATALRFASD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5X3</accession>
    <name>A0A0M7A5X3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Acetylornithine aminotransferase</fullName>
            <shortName evidence="2">ACOAT</shortName>
            <ecNumber evidence="2">2.6.1.11</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">aruC</name>
        <name evidence="2" type="synonym">argD</name>
        <name evidence="5" type="ORF">LAX5112_02543</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>2-oxoglutarate + N(2)-acetyl-L-ornithine = L-glutamate + N-acetyl-L-glutamate 5-semialdehyde</text>
            <dbReference type="Rhea" id="RHEA:18049"/>
            <dbReference type="ChEBI" id="CHEBI:16810"/>
            <dbReference type="ChEBI" id="CHEBI:29123"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:57805"/>
            <dbReference type="EC" id="2.6.1.11"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
        <text evidence="2">Binds 1 pyridoxal phosphate per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2">Amino-acid biosynthesis; L-arginine biosynthesis; N(2)-acetyl-L-ornithine from L-glutamate: step 4/4.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="miscellaneous">
        <text evidence="2">May also have succinyldiaminopimelate aminotransferase activity, thus carrying out the corresponding step in lysine biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.6.1.11" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70535.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672112.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02543"/>
    <dbReference type="EnsemblBacteria" id="CTQ70535">
        <property type="protein sequence ID" value="CTQ70535"/>
        <property type="gene ID" value="LAX5112_02543"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00068">
        <property type="reaction ID" value="UER00109"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003992">
        <property type="term" value="F:N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006526">
        <property type="term" value="P:arginine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00610">
        <property type="entry name" value="OAT_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01107">
        <property type="entry name" value="ArgD_aminotrans_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004636">
        <property type="entry name" value="AcOrn/SuccOrn_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005814">
        <property type="entry name" value="Aminotrans_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00202">
        <property type="entry name" value="Aminotran_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000521">
        <property type="entry name" value="Transaminase_4ab_Lys_Orn"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00707">
        <property type="entry name" value="argD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00600">
        <property type="entry name" value="AA_TRANSFER_CLASS_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="2 5" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="2" id="KW-0055">Arginine biosynthesis</keyword>
    <keyword evidence="4" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="1 2 3" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0808">Transferase</keyword>
    <feature type="region of interest" description="Pyridoxal phosphate binding" evidence="2">
        <location>
            <begin position="97"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="region of interest" description="Pyridoxal phosphate binding" evidence="2">
        <location>
            <begin position="215"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="4">
        <location>
            <begin position="372"/>
            <end position="399"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="130"/>
        </location>
        <ligand>
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="133"/>
        </location>
        <ligand>
            <name>N(2)-acetyl-L-ornithine</name>
            <dbReference type="ChEBI" id="CHEBI:57805"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="272"/>
        </location>
        <ligand>
            <name>N(2)-acetyl-L-ornithine</name>
            <dbReference type="ChEBI" id="CHEBI:57805"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="273"/>
        </location>
        <ligand>
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </ligand>
    </feature>
    <feature type="modified residue" description="N6-(pyridoxal phosphate)lysine" evidence="2">
        <location>
            <position position="244"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01107"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU003560"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ70535.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="399" mass="42135" checksum="7F9D2A209E62736B" modified="2015-12-09" version="1">MSASALFGNYARSNLSFDHGEGVWLVASDGRRFLDCGSGIAVNSLGHAHPHLVQALQDQAAKLWHISNLHQMPDGARLAQRLTDATFADKVLFVNSGAEAMEAAIKCARRYHYDRNDLDRYQIVTFEGAFHGRTLGTIAAGGQAKYLEGFGPKAPGFDQVPSGDLDALKAMVGPQTAAIAIEPIQGEGGIREVDYEFLRALRKLCDETGALLIFDEIQTGVGRTGKMFAHQWTGVDPDLMAVAKGIGSGFPMGACLATEEVASALAPGTHGTTFGGNPLAMAVGNAVLDVILADGFLEEVQKKGLSFKQKLSGLVDSHPKVFEAVRGNGLMLGIKCTAPVGDYVAAAREAGILAVPAGDNVVRILPPLTISEDEIADALDRLEQAAVAVEEKLLEGAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6H3</accession>
    <name>A0A0M7A6H3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Endonuclease/Exonuclease/phosphatase family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02037</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69234.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671722.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02037"/>
    <dbReference type="EnsemblBacteria" id="CTQ69234">
        <property type="protein sequence ID" value="CTQ69234"/>
        <property type="gene ID" value="LAX5112_02037"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004519">
        <property type="term" value="F:endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004527">
        <property type="term" value="F:exonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036691">
        <property type="entry name" value="Endo/exonu/phosph_ase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005135">
        <property type="entry name" value="Endo/exonuclease/phosphatase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03372">
        <property type="entry name" value="Exo_endo_phos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56219">
        <property type="entry name" value="SSF56219"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="2" id="KW-0269">Exonuclease</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0540">Nuclease</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Endo/exonuclease/phosphatase" evidence="1">
        <location>
            <begin position="4"/>
            <end position="284"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03372"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69234.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="324" mass="36107" checksum="BD92206C106F7B9E" modified="2015-12-09" version="1">MKLATFNLESFGTDRIDEVLLARRIDALRPKLLELEADILCLQEVNAQKIKGQSSRQFHDLERLIEGTPYQDFSLSGSLRPSGKGPGDRHNLVVLSRYPVLSAESLYHRHAEPPLWRPGNADPGYDEPQTTAFDRPVQQLQIDMGTGHPLHVFNVHLRAPIAAQIRGGKDAEHNWASVSAWAEGYHLSVLKQTAQALELRLGAEALFDEDPDAQIILTGDFNATGETRALRLLRADPHDTSVPELAYRQLYQLDAALPLEQRKTVLHKGRAQTLDHVLASRSMTDRVAHIKVFNAALPDEILEGDNPDYAGSYHAAMCVDFDMS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="32" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6M5</accession>
    <name>A0A0M7A6M5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase</fullName>
            <ecNumber evidence="7">6.3.2.13</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Meso-A2pm-adding enzyme</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">Meso-diaminopimelate-adding enzyme</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">UDP-MurNAc-tripeptide synthetase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">UDP-N-acetylmuramyl-tripeptide synthetase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7 12" type="primary">murE</name>
        <name evidence="12" type="ORF">LAX5112_02610</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>ATP + meso-2,6-diaminoheptanedioate + UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamate = ADP + H(+) + phosphate + UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptanedioate</text>
            <dbReference type="Rhea" id="RHEA:23676"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57791"/>
            <dbReference type="ChEBI" id="CHEBI:83900"/>
            <dbReference type="ChEBI" id="CHEBI:83905"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.2.13"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="7">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="7 8">Cell wall biogenesis; peptidoglycan biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7 8">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="PTM">
        <text evidence="7">Carboxylation is probably crucial for Mg(2+) binding and, consequently, for the gamma-phosphate positioning of ATP.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 7">Belongs to the MurCDEF family. MurE subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="6.3.2.13" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70785.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672192.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02610"/>
    <dbReference type="EnsemblBacteria" id="CTQ70785">
        <property type="protein sequence ID" value="CTQ70785"/>
        <property type="gene ID" value="LAX5112_02610"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00219"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008765">
        <property type="term" value="F:UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007049">
        <property type="term" value="P:cell cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008360">
        <property type="term" value="P:regulation of cell shape"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1190.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.190.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00208">
        <property type="entry name" value="MurE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036565">
        <property type="entry name" value="Mur-like_cat_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004101">
        <property type="entry name" value="Mur_ligase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036615">
        <property type="entry name" value="Mur_ligase_C_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013221">
        <property type="entry name" value="Mur_ligase_cen"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000713">
        <property type="entry name" value="Mur_ligase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035911">
        <property type="entry name" value="MurE/MurF_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005761">
        <property type="entry name" value="UDP-N-AcMur-Glu-dNH2Pim_ligase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01225">
        <property type="entry name" value="Mur_ligase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02875">
        <property type="entry name" value="Mur_ligase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08245">
        <property type="entry name" value="Mur_ligase_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53244">
        <property type="entry name" value="SSF53244"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53623">
        <property type="entry name" value="SSF53623"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63418">
        <property type="entry name" value="SSF63418"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01085">
        <property type="entry name" value="murE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 7 8" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="2 7 8" id="KW-0132">Cell division</keyword>
    <keyword evidence="3 7 8" id="KW-0133">Cell shape</keyword>
    <keyword evidence="6 7 8" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7 12" id="KW-0436">Ligase</keyword>
    <keyword evidence="7" id="KW-0460">Magnesium</keyword>
    <keyword evidence="7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4 7 8" id="KW-0573">Peptidoglycan synthesis</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Mur_ligase" evidence="9">
        <location>
            <begin position="21"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="domain" description="Mur_ligase_M" evidence="11">
        <location>
            <begin position="110"/>
            <end position="313"/>
        </location>
    </feature>
    <feature type="domain" description="Mur_ligase_C" evidence="10">
        <location>
            <begin position="334"/>
            <end position="417"/>
        </location>
    </feature>
    <feature type="region of interest" description="UDP-MurNAc-L-Ala-D-Glu binding" evidence="7">
        <location>
            <begin position="154"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="region of interest" description="Meso-diaminopimelate binding" evidence="7">
        <location>
            <begin position="409"/>
            <end position="412"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="Meso-diaminopimelate recognition motif" evidence="7">
        <location>
            <begin position="409"/>
            <end position="412"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="28"/>
        </location>
        <ligand>
            <name>UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamate</name>
            <dbReference type="ChEBI" id="CHEBI:83900"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="112"/>
            <end position="118"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="181"/>
        </location>
        <ligand>
            <name>UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamate</name>
            <dbReference type="ChEBI" id="CHEBI:83900"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="187"/>
        </location>
        <ligand>
            <name>UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamate</name>
            <dbReference type="ChEBI" id="CHEBI:83900"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="189"/>
        </location>
        <ligand>
            <name>UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamate</name>
            <dbReference type="ChEBI" id="CHEBI:83900"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="385"/>
        </location>
        <ligand>
            <name>meso-2,6-diaminoheptanedioate</name>
            <dbReference type="ChEBI" id="CHEBI:57791"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="457"/>
        </location>
        <ligand>
            <name>meso-2,6-diaminoheptanedioate</name>
            <dbReference type="ChEBI" id="CHEBI:57791"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="461"/>
        </location>
        <ligand>
            <name>meso-2,6-diaminoheptanedioate</name>
            <dbReference type="ChEBI" id="CHEBI:57791"/>
        </ligand>
    </feature>
    <feature type="modified residue" description="N6-carboxylysine" evidence="7">
        <location>
            <position position="221"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00208"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU004135"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF01225"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF02875"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF08245"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ70785.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="489" mass="50906" checksum="931AEAEDF1D079D5" modified="2015-12-09" version="1">MHLEHLADGMSLPDTADGLSIEGLTADSRKVQPGFLFAAFKGSTVDGVQFVPKAVESGAAAVLCATDAEEAVRALVPQTVAVLGADEPRLAFAKMAARFYGRQPDTIVAVTGTAGKTSVAHFVRQIFQAAGHPAASLGTLGIIKPDGESYGGLTTPDPVQLQKDLADLANEGIRYAALEASSHGLDQFRLDGVRLTAAAFTNLGRDHMDYHPTIEDYLQAKLRLFCELLPAGGHVVVDPGEKYTDRVLAIANERGLPVFTVGETGKDLKLTGLRPSGAGQLLTVETPRGEYKVTLPLIGRFQVSNALIAAGLAITAGIDTGAALRALENLKGAPGRLELAGTTPAGGMVFVDYAHKPDALDKALAALKPFAEGSLSVVVGAGGDRDPGKRPLMGEAAARHADLVIVTDDNPRSEDPATIRKAVLAGAPGGLEIGDRAEAIAEGIRRLKSGDILCVAGKGHETGQIVGDTVIPFSDHDSVRHAINQLGVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6Q2</accession>
    <name>A0A0M7A6Q2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02105</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69413.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02105"/>
    <dbReference type="EnsemblBacteria" id="CTQ69413">
        <property type="protein sequence ID" value="CTQ69413"/>
        <property type="gene ID" value="LAX5112_02105"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015035">
        <property type="term" value="F:protein-disulfide reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007263">
        <property type="entry name" value="DCC1-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04134">
        <property type="entry name" value="DCC1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="83"/>
            <end position="104"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69413.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="122" mass="14049" checksum="38C4506EA4B2BFFC" modified="2015-12-09" version="1">MISVYYDGKCGLCSKEINFFKRRTPKHPILWHDIANDPAQLEGTGVSQAEALMFMHVRDAEGVMRTEVDAFIALWRQFSGWSLLSWFVSLPGIYQLAGVLYRMFAKVRFNRYPHCQASLDEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A724</accession>
    <name>A0A0M7A724_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">RNA polymerase sigma factor</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">LAX5112_02665</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the sigma-70 factor family. ECF subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70955.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02665"/>
    <dbReference type="EnsemblBacteria" id="CTQ70955">
        <property type="protein sequence ID" value="CTQ70955"/>
        <property type="gene ID" value="LAX5112_02665"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016987">
        <property type="term" value="F:sigma factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006352">
        <property type="term" value="P:DNA-templated transcription, initiation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050896">
        <property type="term" value="P:response to stimulus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039425">
        <property type="entry name" value="RNA_pol_sigma-70-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014284">
        <property type="entry name" value="RNA_pol_sigma-70_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007627">
        <property type="entry name" value="RNA_pol_sigma70_r2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013249">
        <property type="entry name" value="RNA_pol_sigma70_r4_t2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013325">
        <property type="entry name" value="RNA_pol_sigma_r2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013324">
        <property type="entry name" value="RNA_pol_sigma_r3/r4-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43133">
        <property type="entry name" value="PTHR43133"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04542">
        <property type="entry name" value="Sigma70_r2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08281">
        <property type="entry name" value="Sigma70_r4_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88659">
        <property type="entry name" value="SSF88659"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88946">
        <property type="entry name" value="SSF88946"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02937">
        <property type="entry name" value="sigma70-ECF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Sigma70_r2" evidence="3">
        <location>
            <begin position="28"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="domain" description="Sigma70_r4_2" evidence="4">
        <location>
            <begin position="127"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="180"/>
            <end position="201"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010641"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF04542"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF08281"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ70955.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="201" mass="23250" checksum="8C86296A6F66AF62" modified="2015-12-09" version="1">MTGQNAQVLRWNGPAQSLWMSWIDDGQVLRRRALRLTRGDREAAEDLLSATLIKAVSHVERHHTAIREPRAFLLFAMKNEYISRLRKETSERQVRDFGADIYQDHKADLADRQPDQENTLRHQDALRAVLAAVDALTPEFKRIFRLRFCEECTYKEIAVTMAISEPLARKRVQHLRQHLREAVGEDNAPGKQTRPVSQAMQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A772</accession>
    <name>A0A0M7A772_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Alcohol dehydrogenase [acceptor]</fullName>
            <ecNumber evidence="6">1.1.99.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">alkJ_2</name>
        <name evidence="6" type="ORF">LAX5112_02519</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the GMC oxidoreductase family.</text>
    </comment>
    <dbReference type="EC" id="1.1.99.-" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70467.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02519"/>
    <dbReference type="EnsemblBacteria" id="CTQ70467">
        <property type="protein sequence ID" value="CTQ70467"/>
        <property type="gene ID" value="LAX5112_02519"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016614">
        <property type="term" value="F:oxidoreductase activity, acting on CH-OH group of donors"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012132">
        <property type="entry name" value="GMC_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000172">
        <property type="entry name" value="GMC_OxRdtase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007867">
        <property type="entry name" value="GMC_OxRtase_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11552">
        <property type="entry name" value="PTHR11552"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05199">
        <property type="entry name" value="GMC_oxred_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00732">
        <property type="entry name" value="GMC_oxred_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000137">
        <property type="entry name" value="Alcohol_oxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00623">
        <property type="entry name" value="GMC_OXRED_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00624">
        <property type="entry name" value="GMC_OXRED_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3" id="KW-0274">FAD</keyword>
    <keyword evidence="3" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GMC_OxRdtase_N" evidence="4">
        <location>
            <begin position="129"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="domain" description="GMC_OxRdtase_N" evidence="5">
        <location>
            <begin position="298"/>
            <end position="312"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <begin position="139"/>
            <end position="142"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010790"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR000137-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU003968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS00623"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS00624"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ70467.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="586" mass="63123" checksum="0D008881FD4B0AFA" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A792</accession>
    <name>A0A0M7A792_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Acetyltransferase (GNAT) family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02526</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70487.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70487">
        <property type="protein sequence ID" value="CTQ70487"/>
        <property type="gene ID" value="LAX5112_02526"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="82"/>
            <end position="216"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70487.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="218" mass="24127" checksum="5606ADBAEC78A4B5" modified="2015-12-09" version="1">MVRISGSLDDDLEFRPAARSDLDAVYDISLLTGNAGRDATSLYVDPKLMGHIYAAPYLILDGTIGYVVENQKQVLGFVLGATNTRDFEAQLEDRWWPELRRDYPWPGQVQGELTADQKRIHMIHRPDVVPERVVQTFPAHLHMNLLPEVQGKGVGTALLNVWLDAARNASVSGVHVRVNAKNTSGFAFWKSRGFQPLLTQKSMGSAGTIWCGLQVGVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A793</accession>
    <name>A0A0M7A793_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Cytochrome-c oxidase</fullName>
            <ecNumber evidence="3">7.1.1.9</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Cytochrome aa3 subunit 3</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="8">Cytochrome c oxidase polypeptide III</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="12" type="primary">ctaE</name>
        <name evidence="12" type="ORF">LAX5112_02362</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cell membrane</location>
            <topology evidence="9">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the cytochrome c oxidase subunit 3 family.</text>
    </comment>
    <dbReference type="EC" id="7.1.1.9" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70110.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671981.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02362"/>
    <dbReference type="EnsemblBacteria" id="CTQ70110">
        <property type="protein sequence ID" value="CTQ70110"/>
        <property type="gene ID" value="LAX5112_02362"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004129">
        <property type="term" value="F:cytochrome-c oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019646">
        <property type="term" value="P:aerobic electron transport chain"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01665">
        <property type="entry name" value="Cyt_c_Oxidase_III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024791">
        <property type="entry name" value="Cyt_c/ubiquinol_Oxase_su3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033945">
        <property type="entry name" value="Cyt_c_oxase_su3_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000298">
        <property type="entry name" value="Cyt_c_oxidase-like_su3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035973">
        <property type="entry name" value="Cyt_c_oxidase_su3-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013833">
        <property type="entry name" value="Cyt_c_oxidase_su3_a-hlx"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11403">
        <property type="entry name" value="PTHR11403"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00510">
        <property type="entry name" value="COX3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81452">
        <property type="entry name" value="SSF81452"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50253">
        <property type="entry name" value="COX3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 9 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 10" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="21"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="58"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="96"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="152"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="184"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="217"/>
            <end position="245"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="265"/>
            <end position="285"/>
        </location>
    </feature>
    <feature type="domain" description="COX3" evidence="11">
        <location>
            <begin position="7"/>
            <end position="286"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010581"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00031400"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00031625"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU003376"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50253"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ70110.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="292" mass="32832" checksum="5E01E4512B0AA516" modified="2015-12-09" version="1">MAGAHTKNHDYHLVEPSPWPFIASVGAFILALGSIAWMRYASGNSFELFGMELSAAKWMLFAVGLLIVLYVMFAWWRDTIKEAHEGHHTRVVSLHLRYGMLLFIASEVMFFVAWFWAYFDAALFAGEAINFARAEATGGVWPPEGIETFDPWHLPLLNTLILLASGTTVTWAHHALLHDDREGLKWGLTLTVLLGVLFTICQIYEYTHAAFGFSGNIYGATFYMATGFHGFHVVVGTIFLAVCLFRALAGHFTVKQHFGFEAAAWYWHFVDVVWLFLFVAIYIWGAGTPAAH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7I6</accession>
    <name>A0A0M7A7I6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Outer membrane protein assembly factor BamD</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1 3" type="primary">bamD</name>
        <name evidence="3" type="ORF">LAX5112_02623</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.</text>
    </comment>
    <comment type="subunit">
        <text evidence="1">Part of the Bam complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell outer membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the BamD family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70829.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672201.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02623"/>
    <dbReference type="EnsemblBacteria" id="CTQ70829">
        <property type="protein sequence ID" value="CTQ70829"/>
        <property type="gene ID" value="LAX5112_02623"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009279">
        <property type="term" value="C:cell outer membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043165">
        <property type="term" value="P:Gram-negative-bacterium-type cell outer membrane assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051205">
        <property type="term" value="P:protein insertion into membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd15830">
        <property type="entry name" value="BamD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00922">
        <property type="entry name" value="OM_assembly_BamD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017689">
        <property type="entry name" value="BamD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039565">
        <property type="entry name" value="BamD-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13525">
        <property type="entry name" value="YfiO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="SSF48452"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03302">
        <property type="entry name" value="OM_YfiO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0998">Cell outer membrane</keyword>
    <keyword evidence="3" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5008992014" description="Outer membrane protein assembly factor BamD" evidence="1">
        <location>
            <begin position="34"/>
            <end position="287"/>
        </location>
    </feature>
    <feature type="domain" description="YfiO" evidence="2">
        <location>
            <begin position="47"/>
            <end position="243"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00922"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ70829.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="287" mass="32551" checksum="50237B1123A3C610" modified="2015-12-09" version="1" precursor="true">MNGRQLGFSAWTAPRLKRYLALAVLVAPLALSACSSKDEFDELALNDTPAEVLFNEGLALRAQGKLRDSTAKFEELDKLYPYSEYSKKSLVNLAYLNYTRGKYTETVTTANRFVTLYPGDPDSAYMLYLVGQSYYRQMPDITRDQATTERAASAYGELLQRFPESEYVPDAQRKLLIVQDQLGGKEMQVGRYYLERRNYVAAVNRFKTVVNNYQTTRHVEEALFRLTEAYYALGVISEAQTAAAVLGHNFPDTQWYKDAYTLLNSGGYEPSEDSGSWISRAFRGIKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8B9</accession>
    <name>A0A0M7A8B9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02310</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ69983.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671941.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02310"/>
    <dbReference type="EnsemblBacteria" id="CTQ69983">
        <property type="protein sequence ID" value="CTQ69983"/>
        <property type="gene ID" value="LAX5112_02310"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809326" evidence="1">
        <location>
            <begin position="33"/>
            <end position="191"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69983.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="191" mass="20286" checksum="53BBCD470E32E87B" modified="2015-12-09" version="1">MTKQASRFKLGRNSTTLALVFGIFAAAGSAVAQSPDYKAPSPAFMEALAAFDAAWMSGGLAFSTVTFTDGPGSGYGKYTATENNVFSAGDTIALYAEPVGYAFDQSQDGYTYKLAASYRLINPSGQVLSEQSDFAEFTGTTRSKQRQLSASLSFQFDGLPAGDYELETSFVDQIGNQTAGFKLPFTIQAAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8D3</accession>
    <name>A0A0M7A8D3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Vibriobactin utilization protein ViuB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">viuB</name>
        <name evidence="2" type="ORF">LAX5112_02635</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70867.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672210.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02635"/>
    <dbReference type="EnsemblBacteria" id="CTQ70867">
        <property type="protein sequence ID" value="CTQ70867"/>
        <property type="gene ID" value="LAX5112_02635"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013113">
        <property type="entry name" value="FAD-bd_9_SIP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017927">
        <property type="entry name" value="FAD-bd_FR_type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039261">
        <property type="entry name" value="FNR_nucleotide-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017938">
        <property type="entry name" value="Riboflavin_synthase-like_b-brl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007037">
        <property type="entry name" value="SIP_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039374">
        <property type="entry name" value="SIP_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30157">
        <property type="entry name" value="PTHR30157"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08021">
        <property type="entry name" value="FAD_binding_9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04954">
        <property type="entry name" value="SIP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63380">
        <property type="entry name" value="SSF63380"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51384">
        <property type="entry name" value="FAD_FR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FAD-binding FR-type" evidence="1">
        <location>
            <begin position="7"/>
            <end position="128"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51384"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70867.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="264" mass="29566" checksum="1EA64184E9EDD398" modified="2015-12-09" version="1">MAALPKRKPRFLTVKSAVYLSPHMIRVTFAGPELEGFPLHQEGANCKLVLPRDGESRNDFEAYFGLDADEKVHPVRTYTVRAYRAGSLELDIDFVAHGDNGPATRWAQSAKPGSFLGFFGPSQKKIKEFYADWYLVAADLSAMPVAETVLEQMPRDAKGVALFEVPSEDDIREIAAPSNIEVHWLIHEDPHVASTAQLDFIKSMTWPDGVLQTCIAGESSVIRAIRDHLNNTRQVPRKDTYISGYWKIGLVEDEHQKMKRAEAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8N3</accession>
    <name>A0A0M7A8N3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase</fullName>
            <ecNumber evidence="10">2.4.1.227</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10">Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="10 13" type="primary">murG</name>
        <name evidence="13" type="ORF">LAX5112_02615</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc-(pentapeptide)GlcNAc (lipid intermediate II).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>di-trans-octa-cis-undecaprenyl diphospho-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine + UDP-N-acetyl-alpha-D-glucosamine = di-trans-octa-cis-undecaprenyl diphospho-[N-acetyl-alpha-D-glucosaminyl-(1-&gt;4)]-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine + H(+) + UDP</text>
            <dbReference type="Rhea" id="RHEA:31227"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57705"/>
            <dbReference type="ChEBI" id="CHEBI:58223"/>
            <dbReference type="ChEBI" id="CHEBI:61387"/>
            <dbReference type="ChEBI" id="CHEBI:61388"/>
            <dbReference type="EC" id="2.4.1.227"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="10">Cell wall biogenesis; peptidoglycan biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="10">Cell membrane</location>
            <topology evidence="10">Peripheral membrane protein</topology>
            <orientation evidence="10">Cytoplasmic side</orientation>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="10">Belongs to the glycosyltransferase 28 family. MurG subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.227" evidence="10"/>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70802.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672196.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02615"/>
    <dbReference type="EnsemblBacteria" id="CTQ70802">
        <property type="protein sequence ID" value="CTQ70802"/>
        <property type="gene ID" value="LAX5112_02615"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00219"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051991">
        <property type="term" value="F:UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol 4-beta-N-acetylglucosaminlytransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050511">
        <property type="term" value="F:undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007049">
        <property type="term" value="P:cell cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030259">
        <property type="term" value="P:lipid glycosylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008360">
        <property type="term" value="P:regulation of cell shape"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00033">
        <property type="entry name" value="MurG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006009">
        <property type="entry name" value="GlcNAc_MurG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007235">
        <property type="entry name" value="Glyco_trans_28_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004276">
        <property type="entry name" value="GlycoTrans_28_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04101">
        <property type="entry name" value="Glyco_tran_28_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03033">
        <property type="entry name" value="Glyco_transf_28"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01133">
        <property type="entry name" value="murG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 10" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="2 10" id="KW-0132">Cell division</keyword>
    <keyword evidence="1 10" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 10" id="KW-0133">Cell shape</keyword>
    <keyword evidence="9 10" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="3 10 13" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="7 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="6 10" id="KW-0573">Peptidoglycan synthesis</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 10 13" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glyco_transf_28" evidence="11">
        <location>
            <begin position="5"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="domain" description="Glyco_tran_28_C" evidence="12">
        <location>
            <begin position="187"/>
            <end position="353"/>
        </location>
    </feature>
    <feature type="region of interest" description="UDP-N-acetyl-alpha-D-glucosamine binding" evidence="10">
        <location>
            <begin position="12"/>
            <end position="14"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="123"/>
        </location>
        <ligand>
            <name>UDP-N-acetyl-alpha-D-glucosamine</name>
            <dbReference type="ChEBI" id="CHEBI:57705"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="165"/>
        </location>
        <ligand>
            <name>UDP-N-acetyl-alpha-D-glucosamine</name>
            <dbReference type="ChEBI" id="CHEBI:57705"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="193"/>
        </location>
        <ligand>
            <name>UDP-N-acetyl-alpha-D-glucosamine</name>
            <dbReference type="ChEBI" id="CHEBI:57705"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="294"/>
        </location>
        <ligand>
            <name>UDP-N-acetyl-alpha-D-glucosamine</name>
            <dbReference type="ChEBI" id="CHEBI:57705"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF03033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF04101"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="CTQ70802.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="368" mass="39312" checksum="E3555B101B6AF685" modified="2015-12-09" version="1">MSKTVLLTAGGTGGHLFPAQALASELSRRGWTVELATDERADKYGTEFPARKVHIIASATIRGRNPVSLAKTAFQLLFGTLQARKVIKALQPDVVAGFGGYPTFPPMYAARLTNTPSILHEANAVMGRANKLLAKGVSAIATSVPIEDLPSDLSSKLVETGNPVRDAVLDAAELDFTPPAFAGPLKLLVFGGSQGARFFSDLVPPAVAELSDEQRKRVKIVQQCRPEDMERVQKAYQDLGVEAECAPFFTDLPQRIAQAHLVVCRSGASSVSELSVLGRPSILVPLPGAIDQDQAANAKVLEKAGGAWAIRQVDLHPSRLSKELIRFMDAPEMLEAAAKAARTVAKPDAVKRLADLVESVAQNKGVRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A951</accession>
    <name>A0A0M7A951_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Copper outer membrane regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">comR_2</name>
        <name evidence="3" type="ORF">LAX5112_02598</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70750.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02598"/>
    <dbReference type="EnsemblBacteria" id="CTQ70750">
        <property type="protein sequence ID" value="CTQ70750"/>
        <property type="gene ID" value="LAX5112_02598"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036271">
        <property type="entry name" value="Tet_transcr_reg_TetR-rel_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00440">
        <property type="entry name" value="TetR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48498">
        <property type="entry name" value="SSF48498"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50977">
        <property type="entry name" value="HTH_TETR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH tetR-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="1">
        <location>
            <begin position="17"/>
            <end position="36"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ70750.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="181" mass="19573" checksum="D2A401DAAA1E0A78" modified="2015-12-09" version="1">MDAFVDVFWTKGYGGTSVDDLQSAAGIKRGSFYASFGSKDDVFQTVMDRYWKSVTEPGLSNLEPAATAVDGVASFLRHVGRFMSENPFRGCLLLSSAGTSTSKIDTSEAVSERMAQLESRLTQRLHTDPDLSLDRARNLAAYVLTVLLGLNAMARMGHDGSSIQSAAEYAAQSLYALSQQP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A991</accession>
    <name>A0A0M7A991_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Immunogenic protein MPT70</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02403</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70194.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02403"/>
    <dbReference type="EnsemblBacteria" id="CTQ70194">
        <property type="protein sequence ID" value="CTQ70194"/>
        <property type="gene ID" value="LAX5112_02403"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.180.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036378">
        <property type="entry name" value="FAS1_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000782">
        <property type="entry name" value="FAS1_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02469">
        <property type="entry name" value="Fasciclin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00554">
        <property type="entry name" value="FAS1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82153">
        <property type="entry name" value="SSF82153"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50213">
        <property type="entry name" value="FAS1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809166" evidence="1">
        <location>
            <begin position="23"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="domain" description="FAS1" evidence="2">
        <location>
            <begin position="24"/>
            <end position="156"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50213"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ70194.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="160" mass="16395" checksum="8F07419B8AF9C77B" modified="2015-12-09" version="1">MKLIQKLAVALLLVLPFSAAKAADKDIVDTAVGAGTFNTLVAAVQAADLVDTLKGDGPFTVFAPTDEAFAKLPAGTVEDLLKPENKDKLVAILTYHVVPGKVMSSDIAGKKADVASVQGDTIAVDATDGVKVDDANVVTADIETSNGVIHVIDSVILPAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAF7</accession>
    <name>A0A0M7AAF7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Arylsulfatase</fullName>
            <ecNumber evidence="4">3.1.6.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">atsA_2</name>
        <name evidence="4" type="ORF">LAX5112_03045</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="PTM">
        <text evidence="1">The conversion to 3-oxoalanine (also known as C-formylglycine, FGly), of a serine or cysteine residue in prokaryotes and of a cysteine residue in eukaryotes, is critical for catalytic activity.</text>
    </comment>
    <dbReference type="EC" id="3.1.6.1" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72088.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672527.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03045"/>
    <dbReference type="EnsemblBacteria" id="CTQ72088">
        <property type="protein sequence ID" value="CTQ72088"/>
        <property type="gene ID" value="LAX5112_03045"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004065">
        <property type="term" value="F:arylsulfatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017850">
        <property type="entry name" value="Alkaline_phosphatase_core_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000917">
        <property type="entry name" value="Sulfatase_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00884">
        <property type="entry name" value="Sulfatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53649">
        <property type="entry name" value="SSF53649"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809233" evidence="2">
        <location>
            <begin position="25"/>
            <end position="527"/>
        </location>
    </feature>
    <feature type="domain" description="Sulfatase" evidence="3">
        <location>
            <begin position="64"/>
            <end position="408"/>
        </location>
    </feature>
    <feature type="modified residue" description="3-oxoalanine (Cys)" evidence="1">
        <location>
            <position position="114"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRSR" id="PIRSR600917-51"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ72088.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="527" mass="57703" checksum="A2151F9401219D45" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAI6</accession>
    <name>A0A0M7AAI6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="8 18">Succinate dehydrogenase flavoprotein subunit</fullName>
            <ecNumber evidence="7 18">1.3.5.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="21" type="primary">sdhA</name>
        <name evidence="21" type="ORF">LAX5112_02838</name>
    </gene>
    <organism evidence="21 22">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="22" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="22">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 18">
            <text>a quinone + succinate = a quinol + fumarate</text>
            <dbReference type="Rhea" id="RHEA:40523"/>
            <dbReference type="ChEBI" id="CHEBI:24646"/>
            <dbReference type="ChEBI" id="CHEBI:29806"/>
            <dbReference type="ChEBI" id="CHEBI:30031"/>
            <dbReference type="ChEBI" id="CHEBI:132124"/>
            <dbReference type="EC" id="1.3.5.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 18">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="5 18">Carbohydrate metabolism; tricarboxylic acid cycle; fumarate from succinate (bacterial route): step 1/1.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4 18">Cell inner membrane</location>
            <topology evidence="4 18">Peripheral membrane protein</topology>
            <orientation evidence="4 18">Cytoplasmic side</orientation>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="3">Membrane</location>
            <topology evidence="3">Peripheral membrane protein</topology>
            <orientation evidence="3">Cytoplasmic side</orientation>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6 18">Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.</text>
    </comment>
    <dbReference type="EC" id="1.3.5.1" evidence="7 18"/>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71482.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672366.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02838"/>
    <dbReference type="EnsemblBacteria" id="CTQ71482">
        <property type="protein sequence ID" value="CTQ71482"/>
        <property type="gene ID" value="LAX5112_02838"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00223">
        <property type="reaction ID" value="UER01005"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008177">
        <property type="term" value="F:succinate dehydrogenase (ubiquinone) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022900">
        <property type="term" value="P:electron transport chain"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006099">
        <property type="term" value="P:tricarboxylic acid cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.700.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003953">
        <property type="entry name" value="FAD-binding_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003952">
        <property type="entry name" value="FRD_SDH_FAD_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037099">
        <property type="entry name" value="Fum_R/Succ_DH_flav-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015939">
        <property type="entry name" value="Fum_Rdtase/Succ_DH_flav-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030664">
        <property type="entry name" value="SdhA/FrdA/AprA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027477">
        <property type="entry name" value="Succ_DH/fumarate_Rdtase_cat_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011281">
        <property type="entry name" value="Succ_DH_flav_su_fwd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014006">
        <property type="entry name" value="Succ_Dhase_FrdA_Gneg"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11632">
        <property type="entry name" value="PTHR11632"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00890">
        <property type="entry name" value="FAD_binding_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02910">
        <property type="entry name" value="Succ_DH_flav_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46977">
        <property type="entry name" value="SSF46977"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56425">
        <property type="entry name" value="SSF56425"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01816">
        <property type="entry name" value="sdhA_forward"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01812">
        <property type="entry name" value="sdhA_frdA_Gneg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00504">
        <property type="entry name" value="FRD_SDH_FAD_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="18" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="18" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="13 18" id="KW-0249">Electron transport</keyword>
    <keyword evidence="12 18" id="KW-0274">FAD</keyword>
    <keyword evidence="11 18" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="15 18" id="KW-0472">Membrane</keyword>
    <keyword evidence="14 18" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="22" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9 18" id="KW-0813">Transport</keyword>
    <keyword evidence="10 18" id="KW-0816">Tricarboxylic acid cycle</keyword>
    <feature type="domain" description="FAD_binding_2" evidence="19">
        <location>
            <begin position="13"/>
            <end position="409"/>
        </location>
    </feature>
    <feature type="domain" description="Succ_DH_flav_C" evidence="20">
        <location>
            <begin position="464"/>
            <end position="608"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="16">
        <location>
            <position position="291"/>
        </location>
    </feature>
    <feature type="modified residue" description="Tele-8alpha-FAD histidine" evidence="17">
        <location>
            <position position="49"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000030"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004287"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00004515"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00004894"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00008040"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00012792"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00019965"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022532"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="PIRSR" id="PIRSR611281-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="PIRSR" id="PIRSR611281-4"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="RuleBase" id="RU362051"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="19">
        <source>
            <dbReference type="Pfam" id="PF00890"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="20">
        <source>
            <dbReference type="Pfam" id="PF02910"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="21">
        <source>
            <dbReference type="EMBL" id="CTQ71482.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="22">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="608" mass="66538" checksum="7C6418A76912D494" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAV9</accession>
    <name>A0A0M7AAV9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Butyrate--acetoacetate CoA-transferase subunit B</fullName>
            <ecNumber evidence="3">2.8.3.9</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ctfB</name>
        <name evidence="3" type="ORF">LAX5112_02596</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the 3-oxoacid CoA-transferase subunit B family.</text>
    </comment>
    <dbReference type="EC" id="2.8.3.9" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70744.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672181.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02596"/>
    <dbReference type="EnsemblBacteria" id="CTQ70744">
        <property type="protein sequence ID" value="CTQ70744"/>
        <property type="gene ID" value="LAX5112_02596"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047371">
        <property type="term" value="F:butyrate-acetoacetate CoA-transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012791">
        <property type="entry name" value="3-oxoacid_CoA-transf_B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004165">
        <property type="entry name" value="CoA_trans_fam_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037171">
        <property type="entry name" value="NagB/RpiA_transferase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13707">
        <property type="entry name" value="PTHR13707"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01144">
        <property type="entry name" value="CoA_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00882">
        <property type="entry name" value="CoA_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100950">
        <property type="entry name" value="SSF100950"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02428">
        <property type="entry name" value="pcaJ_scoB_fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007047"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ70744.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="217" mass="22697" checksum="4DB3F5D5693B6C13" modified="2015-12-09" version="1">MDAKEIIARRVAQEIQPDTLVNLGIGLPSMVANYLPKEVHVFFQAENGVIGLGARPPEGMEDPDLTDAGGGFVTAVPGAASIDSAMSFGLIRGGHLDTTVLGGLQVDERGFLANWMIPGKMVPGMGGAMDLVAGAKNVIVAMVHTAKGKPKILHECQLPLTAQRRVSLIVTEMAVIEPTEEGLLLKEVGPGASVDDVISATEASLIIRGDVPQMKLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABY2</accession>
    <name>A0A0M7ABY2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Ion transport protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_02984</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71952.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040453009.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02984"/>
    <dbReference type="EnsemblBacteria" id="CTQ71952">
        <property type="protein sequence ID" value="CTQ71952"/>
        <property type="gene ID" value="LAX5112_02984"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005261">
        <property type="term" value="F:cation channel activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.350">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005821">
        <property type="entry name" value="Ion_trans_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043203">
        <property type="entry name" value="VGCC_Ca_Na"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027359">
        <property type="entry name" value="Volt_channel_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10037">
        <property type="entry name" value="PTHR10037"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00520">
        <property type="entry name" value="Ion_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="1 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="14"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="43"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="78"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="119"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="196"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="domain" description="Ion_trans" evidence="6">
        <location>
            <begin position="12"/>
            <end position="228"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00520"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ71952.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="264" mass="29657" checksum="7F905987340ACA91" modified="2015-12-09" version="1">MREKIKALVTSRTWEYWIIAIIVVNAITLGLETSPLVMDRFGTVLIAIDQTILGIFVIEIALRLFAHGFRFFKDPWSLFDFFIVAIALLPSSGTLSVLRSLRILRVLRLISVVPSLRRVIGGLIAALPGMGSIVVLMALVFYVFGVMATKLFGASFPEWFGDLGASLYTLFQIMTLESWSMGIVRPVMEVYPLSWIFFVPFILCTAFTVLNLFIGIIVSAMQEEHEAEADANRQAIHDETGLILEEVKALRAELKELREQTIKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AC55</accession>
    <name>A0A0M7AC55_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Lysine--tRNA ligase</fullName>
            <ecNumber evidence="8">6.1.1.6</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">Lysyl-tRNA synthetase</fullName>
            <shortName evidence="8">LysRS</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8 9" type="primary">lysS</name>
        <name evidence="9" type="ORF">LAX5112_02997</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 8">
            <text>ATP + L-lysine + tRNA(Lys) = AMP + diphosphate + L-lysyl-tRNA(Lys)</text>
            <dbReference type="Rhea" id="RHEA:20792"/>
            <dbReference type="Rhea" id="RHEA-COMP:9696"/>
            <dbReference type="Rhea" id="RHEA-COMP:9697"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:32551"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78529"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.6"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the class-I aminoacyl-tRNA synthetase family.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.6" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71986.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672496.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02997"/>
    <dbReference type="EnsemblBacteria" id="CTQ71986">
        <property type="protein sequence ID" value="CTQ71986"/>
        <property type="gene ID" value="LAX5112_02997"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004824">
        <property type="term" value="F:lysine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006430">
        <property type="term" value="P:lysyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.350">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00177">
        <property type="entry name" value="Lys_tRNA_synth_class1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020751">
        <property type="entry name" value="aa-tRNA-synth_I_codon-bd_sub2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001412">
        <property type="entry name" value="aa-tRNA-synth_I_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008925">
        <property type="entry name" value="aa_tRNA-synth_I_cd-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002904">
        <property type="entry name" value="Lys-tRNA-ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37940">
        <property type="entry name" value="PTHR37940"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01921">
        <property type="entry name" value="tRNA-synt_1f"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48163">
        <property type="entry name" value="SSF48163"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00467">
        <property type="entry name" value="lysS_arch"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00178">
        <property type="entry name" value="AA_TRNA_LIGASE_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 8" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="5 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 8 9" id="KW-0436">Ligase</keyword>
    <keyword evidence="4 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6 8" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="short sequence motif" description="'HIGH' region" evidence="8">
        <location>
            <begin position="54"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="'KMSKS' region" evidence="8">
        <location>
            <begin position="303"/>
            <end position="307"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="306"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005594"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00177"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ71986.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="552" mass="61984" checksum="2DB03AC1D76B061E" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AC71</accession>
    <name>A0A0M7AC71_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7 8">Ferrochelatase</fullName>
            <ecNumber evidence="7 8">4.99.1.1</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Heme synthase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">Protoheme ferro-lyase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7 9" type="primary">hemH</name>
        <name evidence="9" type="ORF">LAX5112_03108</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7 8">Catalyzes the ferrous insertion into protoporphyrin IX.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7 8">
            <text>2 H(+) + heme b = Fe(2+) + protoporphyrin IX</text>
            <dbReference type="Rhea" id="RHEA:22584"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29033"/>
            <dbReference type="ChEBI" id="CHEBI:57306"/>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
            <dbReference type="EC" id="4.99.1.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>Fe-coproporphyrin III + 2 H(+) = coproporphyrin III + Fe(2+)</text>
            <dbReference type="Rhea" id="RHEA:49572"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29033"/>
            <dbReference type="ChEBI" id="CHEBI:68438"/>
            <dbReference type="ChEBI" id="CHEBI:131725"/>
            <dbReference type="EC" id="4.99.1.9"/>
        </reaction>
        <physiologicalReaction direction="right-to-left" evidence="6">
            <dbReference type="Rhea" id="RHEA:49574"/>
        </physiologicalReaction>
    </comment>
    <comment type="pathway">
        <text evidence="7 8">Porphyrin-containing compound metabolism; protoheme biosynthesis; protoheme from protoporphyrin-IX: step 1/1.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7 8">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 7 8">Belongs to the ferrochelatase family.</text>
    </comment>
    <dbReference type="EC" id="4.99.1.1" evidence="7 8"/>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72237.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672587.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03108"/>
    <dbReference type="EnsemblBacteria" id="CTQ72237">
        <property type="protein sequence ID" value="CTQ72237"/>
        <property type="gene ID" value="LAX5112_03108"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00252">
        <property type="reaction ID" value="UER00325"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004325">
        <property type="term" value="F:ferrochelatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006783">
        <property type="term" value="P:heme biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00419">
        <property type="entry name" value="Ferrochelatase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd03411">
        <property type="entry name" value="Ferrochelatase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00323">
        <property type="entry name" value="Ferrochelatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001015">
        <property type="entry name" value="Ferrochelatase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019772">
        <property type="entry name" value="Ferrochelatase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033644">
        <property type="entry name" value="Ferrochelatase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033659">
        <property type="entry name" value="Ferrochelatase_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11108">
        <property type="entry name" value="PTHR11108"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00762">
        <property type="entry name" value="Ferrochelatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00109">
        <property type="entry name" value="hemH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00534">
        <property type="entry name" value="FERROCHELATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 8" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 7 8" id="KW-0350">Heme biosynthesis</keyword>
    <keyword evidence="2 7 8" id="KW-0408">Iron</keyword>
    <keyword evidence="4 7 8" id="KW-0456">Lyase</keyword>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5 7 8" id="KW-0627">Porphyrin biosynthesis</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="binding site" evidence="7">
        <location>
            <position position="228"/>
        </location>
        <ligand>
            <name>Fe(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29033"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="309"/>
        </location>
        <ligand>
            <name>Fe(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29033"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007718"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023133"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00024536"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00323"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU000607"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ72237.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="358" mass="40759" checksum="C063BDD13941C513" modified="2015-12-09" version="1">MNVQPTAPILDQAAEFQKVRLPEGHPDVKAGKIGVLLVNLGTPDATDYWPMRRYLREFLSDKRVIEWPKAIWYPILYGIVLMTRPGKSGKAYEEIWNNEKNESPLRTITRSQSDKLTEMLGDANGRLKVDWAMRYGQPSIPDKLKALKDAGCDRILVFPLYPQYSATTTATVNDVVCKTLLDMRWQPAIRTVPPYHDDPIYVNALAKSVERHLESLDFEPETILTSYHGIPQSYFKRGDPYHCHCMKTTRLMREVLGMDETKLRTTFQSRFGPEEWLQPYTDKTVEQLAKDGMKNIAVMNPGFVSDCLETLEEIAGEAGEIFEEAGGENFTHIPCLNDSDLGMDVLNTIVRRELGGWI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACB2</accession>
    <name>A0A0M7ACB2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Lactoylglutathione lyase</fullName>
            <ecNumber evidence="2">4.4.1.5</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">gloA_2</name>
        <name evidence="2" type="ORF">LAX5112_03022</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="4.4.1.5" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72046.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672511.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03022"/>
    <dbReference type="EnsemblBacteria" id="CTQ72046">
        <property type="protein sequence ID" value="CTQ72046"/>
        <property type="gene ID" value="LAX5112_03022"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004462">
        <property type="term" value="F:lactoylglutathione lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.180.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029068">
        <property type="entry name" value="Glyas_Bleomycin-R_OHBP_Dase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004360">
        <property type="entry name" value="Glyas_Fos-R_dOase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037523">
        <property type="entry name" value="VOC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00903">
        <property type="entry name" value="Glyoxalase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54593">
        <property type="entry name" value="SSF54593"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51819">
        <property type="entry name" value="VOC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="VOC" evidence="1">
        <location>
            <begin position="3"/>
            <end position="126"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51819"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72046.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="131" mass="14795" checksum="047E29BBCD112167" modified="2015-12-09" version="1">MAKMIHSMIRVSDETRSIDFYEKAFGLKIAGRYPFDGFTLIYLANAETGFELELTTNASRTEPYVHGDAYGHLAVSVEDIDAEHQRLAGLGLTVGDVKDFAFEGKPFARFFFLEDPDGYKIEVLQRSGRFQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACV9</accession>
    <name>A0A0M7ACV9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="13">RTX-I toxin determinant B</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">apxIB_1</name>
        <name evidence="13" type="ORF">LAX5112_03024</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72050.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672513.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03024"/>
    <dbReference type="EnsemblBacteria" id="CTQ72050">
        <property type="protein sequence ID" value="CTQ72050"/>
        <property type="gene ID" value="LAX5112_03024"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008233">
        <property type="term" value="F:peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008643">
        <property type="term" value="P:carbohydrate transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1560.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011527">
        <property type="entry name" value="ABC1_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036640">
        <property type="entry name" value="ABC1_TM_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005074">
        <property type="entry name" value="Peptidase_C39"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039421">
        <property type="entry name" value="Type_1_exporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24221">
        <property type="entry name" value="PTHR24221"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00664">
        <property type="entry name" value="ABC_membrane"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03412">
        <property type="entry name" value="Peptidase_C39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90123">
        <property type="entry name" value="SSF90123"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50929">
        <property type="entry name" value="ABC_TM1F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50990">
        <property type="entry name" value="PEPTIDASE_C39"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="4 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0762">Sugar transport</keyword>
    <keyword evidence="3 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="168"/>
            <end position="188"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="208"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="282"/>
            <end position="305"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="311"/>
            <end position="329"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="409"/>
            <end position="434"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase C39" evidence="12">
        <location>
            <begin position="22"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="11">
        <location>
            <begin position="175"/>
            <end position="454"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="10">
        <location>
            <begin position="485"/>
            <end position="705"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="519"/>
            <end position="526"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022597"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50990"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="CTQ72050.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="705" mass="77833" checksum="099818ABEE000DD7" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACY9</accession>
    <name>A0A0M7ACY9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">PilZ domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03275</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72739.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008196344.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03275"/>
    <dbReference type="EnsemblBacteria" id="CTQ72739">
        <property type="protein sequence ID" value="CTQ72739"/>
        <property type="gene ID" value="LAX5112_03275"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035438">
        <property type="term" value="F:cyclic-di-GMP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009875">
        <property type="entry name" value="PilZ_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07238">
        <property type="entry name" value="PilZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PilZ" evidence="2">
        <location>
            <begin position="41"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="18"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="157"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="18"/>
            <end position="33"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07238"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ72739.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="182" mass="20654" checksum="F4AB7588780224CC" modified="2015-12-09" version="1">MSPDVHVILEVPVQTVMSEDKQEQAPVSGQETQTAEDRPRRTRVLKKGKIIFQGGLRSFPCIVRNLSDGGAMLQFETAFLAPPQFELQIDLENFEVTCEKRWEDGLKMGVQFIGEKRIVGAQRAQSLKTSEEALKSEIDLLHDSPDNFFTRQHMMDDTKRVQQPVRRARQAGSGKPAFGKRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADV2</accession>
    <name>A0A0M7ADV2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03247</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72622.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72622">
        <property type="protein sequence ID" value="CTQ72622"/>
        <property type="gene ID" value="LAX5112_03247"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ72622.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="44" mass="4763" checksum="742159436FFE14F1" modified="2015-12-09" version="1">MTYLAQALGTNLMGVVSGRSAAELARMNQTLRLGEAEKARIRGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEF1</accession>
    <name>A0A0M7AEF1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Pyrrolidone-carboxylate peptidase</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">5-oxoprolyl-peptidase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="8">Pyroglutamyl-peptidase I</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9" type="primary">pcp</name>
        <name evidence="9" type="ORF">LAX5112_03403</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase C15 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ73011.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03403"/>
    <dbReference type="EnsemblBacteria" id="CTQ73011">
        <property type="protein sequence ID" value="CTQ73011"/>
        <property type="gene ID" value="LAX5112_03403"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016920">
        <property type="term" value="F:pyroglutamyl-peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.630.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000816">
        <property type="entry name" value="Peptidase_C15"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016125">
        <property type="entry name" value="Peptidase_C15-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036440">
        <property type="entry name" value="Peptidase_C15-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23402">
        <property type="entry name" value="PTHR23402"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01470">
        <property type="entry name" value="Peptidase_C15"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF015592">
        <property type="entry name" value="Prld-crbxl_pptds"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00706">
        <property type="entry name" value="PYROGLUPTASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53182">
        <property type="entry name" value="SSF53182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0645">Protease</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0788">Thiol protease</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006641"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00019191"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022807"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00030836"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00031559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ73011.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="202" mass="22146" checksum="165E0EFA3D41970A" modified="2015-12-09" version="1">MKNNQKTILVTGFTPFPGAPVNPTQLLMKRLPKRLGVHQHGVAYHFDILPTTWEARSNVTDVLRREIRPDAIVHFGVDGTRKDINVENRAVNKAIQVRFDSAGKGPGNPELDPKGERARTATLPAGHLATAARQSGASTKVSQNAGTYLCNATLWDSIGSGIPSIFVHVPPLPRTRWDPRPSLALVENAAVNLLQELARRMR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEU1</accession>
    <name>A0A0M7AEU1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03439</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73147.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ73147">
        <property type="protein sequence ID" value="CTQ73147"/>
        <property type="gene ID" value="LAX5112_03439"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="37"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="37"/>
            <end position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73147.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="103" mass="12040" checksum="8DBB14CA851E2731" modified="2015-12-09" version="1">MQDHRPKRSRTPHEDVLVEDLVPRIAQELHKRFAARLAAKPESQHKSVLRSEDTRRPRNNRAHRHVPVYIPLSNPSDYCERYQYAPLPFNLYHGNATPPAGIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AF31</accession>
    <name>A0A0M7AF31_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Proline--tRNA ligase</fullName>
            <ecNumber evidence="9">6.1.1.15</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">Prolyl-tRNA synthetase</fullName>
            <shortName evidence="9">ProRS</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9 11" type="primary">proS</name>
        <name evidence="11" type="ORF">LAX5112_03470</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 9">
            <text>ATP + L-proline + tRNA(Pro) = AMP + diphosphate + L-prolyl-tRNA(Pro)</text>
            <dbReference type="Rhea" id="RHEA:14305"/>
            <dbReference type="Rhea" id="RHEA-COMP:9700"/>
            <dbReference type="Rhea" id="RHEA-COMP:9702"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:60039"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78532"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.15"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="2 9">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the class-II aminoacyl-tRNA synthetase family. ProS type 2 subfamily.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.15" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73237.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672863.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03470"/>
    <dbReference type="EnsemblBacteria" id="CTQ73237">
        <property type="protein sequence ID" value="CTQ73237"/>
        <property type="gene ID" value="LAX5112_03470"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004827">
        <property type="term" value="F:proline-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006433">
        <property type="term" value="P:prolyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00861">
        <property type="entry name" value="ProRS_anticodon_short"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00779">
        <property type="entry name" value="ProRS_core_prok"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.930.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.800">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01570">
        <property type="entry name" value="Pro_tRNA_synth_type2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002314">
        <property type="entry name" value="aa-tRNA-synt_IIb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006195">
        <property type="entry name" value="aa-tRNA-synth_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045864">
        <property type="entry name" value="aa-tRNA-synth_II/BPL/LPL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004154">
        <property type="entry name" value="Anticodon-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036621">
        <property type="entry name" value="Anticodon-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002316">
        <property type="entry name" value="Pro-tRNA-ligase_IIa"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004500">
        <property type="entry name" value="Pro-tRNA-synth_IIa_bac-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023716">
        <property type="entry name" value="Prolyl-tRNA_ligase_IIa_type2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044140">
        <property type="entry name" value="ProRS_anticodon_short"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033730">
        <property type="entry name" value="ProRS_core_prok"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03129">
        <property type="entry name" value="HGTP_anticodon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00587">
        <property type="entry name" value="tRNA-synt_2b"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01046">
        <property type="entry name" value="TRNASYNTHPRO"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55681">
        <property type="entry name" value="SSF55681"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00409">
        <property type="entry name" value="proS_fam_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50862">
        <property type="entry name" value="AA_TRNA_LIGASE_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 9" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="6 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 9 11" id="KW-0436">Ligase</keyword>
    <keyword evidence="5 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7 9" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AA_TRNA_LIGASE_II" evidence="10">
        <location>
            <begin position="48"/>
            <end position="339"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01570"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50862"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ73237.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="442" mass="49741" checksum="89805C1C4DA29FCE" modified="2015-12-09" version="1">MRLSRYFLPILKETPKEAEIVSHRLMLRAGMIRQQSAGIYSWLPLGLKVLRKIERIVEEEQARAGAVQLLMPTIQPADLWRESGRYDAYGKEMLRITDRHEREMLFGPTNEEMITDIFRSYVRSYKDLPLNLYHIQWKFRDEVRPRFGIMRGREFLMKDAYSFDLDQETARHAYNRMFVAYLRTFDRMGLKAIPMKADTGPIGGDLSHEFIILAETGESEVFLDKSLLEMPIPAKDTDFWSDLSPIVESWTTPYAATDEMHDEAAFGALAEDTRVSARGIEVGHIFYFGTKYSDAMGAKVATAEGTEVPVHMGSYGVGVSRLLGALIEANHDEDGIIWPKSVAPFHVGIINMRPGDDLTDPVCEDLYAKLEAAGIEVLYDDTDSRAGAKFATMDLIGLPFQVVAGPRGLKDGVLEVKDRATGEKEMLTPEATLNKLTAALTD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AF46</accession>
    <name>A0A0M7AF46_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Probable membrane transporter protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">LAX5112_03158</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the 4-toluene sulfonate uptake permease (TSUP) (TC 2.A.102) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72373.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672618.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03158"/>
    <dbReference type="EnsemblBacteria" id="CTQ72373">
        <property type="protein sequence ID" value="CTQ72373"/>
        <property type="gene ID" value="LAX5112_03158"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002781">
        <property type="entry name" value="TM_pro_TauE-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01925">
        <property type="entry name" value="TauE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="7"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="47"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="76"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="100"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="168"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="203"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="228"/>
            <end position="246"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363041"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ72373.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="254" mass="26870" checksum="E2C1F8A927C1A3E4" modified="2015-12-09" version="1">MLLITDPWFYAAAVPAVICVGLSKGGFGGTFAMLGVPIMSLVISPLQAAGIMLPILLVMDAVALMAYKGKADWRSLAILLPAAMLGIGIGWGTAAYVNDTFVTLMIGVISLAFVADYVFKRRKEAAALGHNIPKGSFWGAVAGFTSFISHTGGPPFQMYMLPLKLAPMLFAGTAVIFFATVNAVKVIPYFFLGQFDTTNLTTSAVLFPVALVATLAGVRLVRIIKAETFYTIIYVVMGLIGAKLTYDGLAGLLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFB6</accession>
    <name>A0A0M7AFB6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Metallophosphoesterase, MG_246/ family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03183</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72443.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672626.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03183"/>
    <dbReference type="EnsemblBacteria" id="CTQ72443">
        <property type="protein sequence ID" value="CTQ72443"/>
        <property type="gene ID" value="LAX5112_03183"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.21.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029052">
        <property type="entry name" value="Metallo-depent_PP-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005235">
        <property type="entry name" value="YmdB-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36303">
        <property type="entry name" value="PTHR36303"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13277">
        <property type="entry name" value="YmdB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004789">
        <property type="entry name" value="DR1281"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56300">
        <property type="entry name" value="SSF56300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00282">
        <property type="entry name" value="TIGR00282"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" description="Proton donor" evidence="1">
        <location>
            <position position="68"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="8"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="39"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="40"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="67"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="153"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="178"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="180"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
            <label>1</label>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRSR" id="PIRSR004789-50"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR004789-51"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ72443.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="275" mass="29452" checksum="11693289D0A96056" modified="2015-12-09" version="1">MRILFLGDLVGRVGRTAVVEQLPDLVEEQQLDFVIVNGENSASGFGITEAILQDVLDAGADVVTTGNHVWDQRDTLVYIERQDRLLRPVNYPAGTPGRGAHLFTARNGAQVMVANVMGRVYMDALDDPFAAIDKMVGDCPLGDVADAIIIDVHAEATSEKQAMGHFLDGRVSLVVGTHTHVPTADHQILENGTAYMSDAGMCGAYDSVLGMDKEEPVNRFQRKIPGSRFTPATGAATICGVAIETDDRTGLAQAIAPVRIGGRLEPVLPPFWSAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="31" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFK5</accession>
    <name>A0A0M7AFK5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 7 10">Phosphoglycerate kinase</fullName>
            <ecNumber evidence="2 7 10">2.7.2.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7 11" type="primary">pgk</name>
        <name evidence="11" type="ORF">LAX5112_03176</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 7 10">
            <text>(2R)-3-phosphoglycerate + ATP = (2R)-3-phospho-glyceroyl phosphate + ADP</text>
            <dbReference type="Rhea" id="RHEA:14801"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:57604"/>
            <dbReference type="ChEBI" id="CHEBI:58272"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.2.3"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="7">Carbohydrate degradation; glycolysis; pyruvate from D-glyceraldehyde 3-phosphate: step 2/5.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Monomer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7 10">Belongs to the phosphoglycerate kinase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.7.2.3" evidence="2 7 10"/>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72424.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672623.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03176"/>
    <dbReference type="EnsemblBacteria" id="CTQ72424">
        <property type="protein sequence ID" value="CTQ72424"/>
        <property type="gene ID" value="LAX5112_03176"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00109">
        <property type="reaction ID" value="UER00185"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004618">
        <property type="term" value="F:phosphoglycerate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006096">
        <property type="term" value="P:glycolytic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00318">
        <property type="entry name" value="Phosphoglycerate_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1260">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00145">
        <property type="entry name" value="Phosphoglyc_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001576">
        <property type="entry name" value="Phosphoglycerate_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015911">
        <property type="entry name" value="Phosphoglycerate_kinase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015824">
        <property type="entry name" value="Phosphoglycerate_kinase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036043">
        <property type="entry name" value="Phosphoglycerate_kinase_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11406">
        <property type="entry name" value="PTHR11406"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00162">
        <property type="entry name" value="PGK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000724">
        <property type="entry name" value="Pgk"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00477">
        <property type="entry name" value="PHGLYCKINASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53748">
        <property type="entry name" value="SSF53748"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00111">
        <property type="entry name" value="PGLYCERATE_KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7" id="KW-0324">Glycolysis</keyword>
    <keyword evidence="5 7 10" id="KW-0418">Kinase</keyword>
    <keyword evidence="4 7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7 10" id="KW-0808">Transferase</keyword>
    <feature type="region of interest" description="Substrate binding" evidence="7 8">
        <location>
            <begin position="22"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="7 8">
        <location>
            <begin position="60"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7 8">
        <location>
            <position position="37"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7 8">
        <location>
            <position position="119"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7 8">
        <location>
            <position position="152"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7 9">
        <location>
            <position position="202"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7 9">
        <location>
            <position position="324"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7 9">
        <location>
            <begin position="354"/>
            <end position="357"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000642"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00013061"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00145"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR000724-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR000724-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU000532"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ72424.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="397" mass="41119" checksum="2E87490DB29BC5F1" modified="2015-12-09" version="1">MTFKTLDDITDLAGKRVLVRVDLNVPMDNYKVTDTTRIERVLPTIKELSEKGAKVILLAHFGRPKGEKVKEMSLAPVARAVSDLLGKTVGFAEDCMGPSAAGAVAVMQSGQVLLMENTRFHKGEEKNDPEFAKALAANGDVYVNDAFSAAHRAHGSTEGIAQLLPAYAGRTMQAELEALGSALGEPVRPVLAVVGGAKVSSKIDLLENLVAKVNMLVIGGGMANTFLAAKGVNVGKSLCEHDLADTAKKIMAAAETAGCEIVLPVDAVVAKEFKAGADNETVSVDAIPEDGMILDVGAASVEVVKSKIDAAKTLVWNGPLGAFEIAPFDIATVAAAKHAAENTKSGKLNSVAGGGDTVAALNHAGAASDFSYVSTAGGAFLEWLEGKELPGVKALES</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFL4</accession>
    <name>A0A0M7AFL4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">DNA translocase FtsK</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="primary">ftsK</name>
        <name evidence="15" type="ORF">LAX5112_03703</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Essential cell division protein that coordinates cell division and chromosome segregation. The N-terminus is involved in assembly of the cell-division machinery. The C-terminus functions as a DNA motor that moves dsDNA in an ATP-dependent manner towards the dif recombination site, which is located within the replication terminus region. Translocation stops specifically at Xer-dif sites, where FtsK interacts with the Xer recombinase, allowing activation of chromosome unlinking by recombination. FtsK orienting polar sequences (KOPS) guide the direction of DNA translocation. FtsK can remove proteins from DNA as it translocates, but translocation stops specifically at XerCD-dif site, thereby preventing removal of XerC and XerD from dif.</text>
    </comment>
    <comment type="subunit">
        <text evidence="10">Homohexamer. Forms a ring that surrounds DNA.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the FtsK/SpoIIIE/SftA family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ73945.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673042.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03703"/>
    <dbReference type="EnsemblBacteria" id="CTQ73945">
        <property type="protein sequence ID" value="CTQ73945"/>
        <property type="gene ID" value="LAX5112_03703"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025199">
        <property type="entry name" value="FtsK_4TM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041027">
        <property type="entry name" value="FtsK_alpha"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002543">
        <property type="entry name" value="FtsK_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018541">
        <property type="entry name" value="Ftsk_gamma"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13491">
        <property type="entry name" value="FtsK_4TM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17854">
        <property type="entry name" value="FtsK_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09397">
        <property type="entry name" value="FtsK_gamma"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01580">
        <property type="entry name" value="FtsK_SpoIIIE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00843">
        <property type="entry name" value="Ftsk_gamma"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50901">
        <property type="entry name" value="FTSK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8 13" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 13" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 13" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="33"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="84"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="120"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="145"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="171"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="domain" description="FtsK" evidence="14">
        <location>
            <begin position="557"/>
            <end position="776"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="12">
        <location>
            <begin position="272"/>
            <end position="293"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="12">
        <location>
            <begin position="374"/>
            <end position="403"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="12">
        <location>
            <begin position="835"/>
            <end position="854"/>
        </location>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <begin position="574"/>
            <end position="581"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006474"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00020887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00024784"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00025923"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00289"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS50901"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="CTQ73945.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="923" mass="98856" checksum="BB15B82DE4278F28" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AG97</accession>
    <name>A0A0M7AG97_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Trehalose import ATP-binding protein SugC</fullName>
            <ecNumber evidence="10">3.6.3.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">sugC_1</name>
        <name evidence="10" type="ORF">LAX5112_03255</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.-" evidence="10"/>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72644.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672674.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03255"/>
    <dbReference type="EnsemblBacteria" id="CTQ72644">
        <property type="protein sequence ID" value="CTQ72644"/>
        <property type="gene ID" value="LAX5112_03255"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015408">
        <property type="term" value="F:ABC-type ferric iron transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd03259">
        <property type="entry name" value="ABC_Carb_Solutes_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015853">
        <property type="entry name" value="ABC_transpr_FbpC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008995">
        <property type="entry name" value="Mo/tungstate-bd_C_term_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013611">
        <property type="entry name" value="Transp-assoc_OB_typ2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08402">
        <property type="entry name" value="TOBE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50331">
        <property type="entry name" value="SSF50331"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 8 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="10" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-0472">Membrane</keyword>
    <keyword evidence="5 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ABC transporter" evidence="9">
        <location>
            <begin position="3"/>
            <end position="237"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="35"/>
            <end position="42"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ72644.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="348" mass="37517" checksum="E07F010816BE9685" modified="2015-12-09" version="1">MSIEIASVTKSFGSHKALKDVSLSIPDGTFFVVLGPSGCGKSTLLRTIAGLEPIDSGEIALGGEIVARDGYHLEPERRKTGVVFQSYALWPHMSVAANVAFPMETAGLKTADIKTRTSEHLATVELTAFRDRKPADLSGGQRQRVALARCLAQGAKTVLMDEPLANLDPHLRGAMEEELAAFHKASGATTLFITHDQREAMALADQVAVMWDGEILQVADPDVLYRRPTSGRVASFIGRSSLVGVEVNHVEAGHANVTLAAHRIDVDCPIDTRTGSATLMLRPEHLVPSVGGRGLKANVERTIYRGGFWEVFVAIEGLAEPLLMTLNRPAAPGETLFLDILRGWILPE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHG4</accession>
    <name>A0A0M7AHG4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Surface antigen</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03730</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74021.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451193.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74021">
        <property type="protein sequence ID" value="CTQ74021"/>
        <property type="gene ID" value="LAX5112_03730"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="96"/>
            <end position="118"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74021.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="230" mass="25711" checksum="081E938855716CED" modified="2015-12-09" version="1">MTFDEKKSQVDLAQDIGLILDNEMPPEARDELLIRLQADADSAELMKQMAADQALLQEVLPPSVPDATIKRLESVIEREFDRRAPKAGSDRHWSRAIVYLAASLVLVAGTFAVTNFWMQSRMDQVVASLAVHMETERLALAQTVQEALETKVSGEPVAIGQDGDWSEILTPIKTYKSKSGHWCRQYLRETRFGKLDMTIRGTACRDENGVWTTVFAEPVSDNFSPQTNGI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AI42</accession>
    <name>A0A0M7AI42_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Threonine efflux protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">rhtC_2</name>
        <name evidence="7" type="ORF">LAX5112_03763</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74112.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673084.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03763"/>
    <dbReference type="EnsemblBacteria" id="CTQ74112">
        <property type="protein sequence ID" value="CTQ74112"/>
        <property type="gene ID" value="LAX5112_03763"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006865">
        <property type="term" value="P:amino acid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001123">
        <property type="entry name" value="LeuE-type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30086">
        <property type="entry name" value="PTHR30086"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01810">
        <property type="entry name" value="LysE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0732">Signal</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="6">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809503" evidence="6">
        <location>
            <begin position="20"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="6"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="40"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="68"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="119"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="148"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="191"/>
            <end position="209"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ74112.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="214" mass="21988" checksum="F6FCA4CA79F1778A" modified="2015-12-09" version="1">MYIVEAYAAALILTVAAQAAPGPNLVAVAAAALGQGRRAAVCVTLGVASGVLVWVTAVAFGLAVLLDLFPAVLTAMKILGGCYLLFVAAKAARSVLWPSSGGTIRAAGKKASDFKNWRFGLFVVLSNPKAGLMWIAVASFLFGQGLEAPAVLAFGPLGAVSAFLVYGAYALLFSTGRITLAYQKFQRGFEAAFAAAFGAMGAALILSGLREAHR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AII1</accession>
    <name>A0A0M7AII1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Polyphosphate kinase 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">LAX5112_03938</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>[phosphate](n) + ATP = [phosphate](n+1) + ADP</text>
            <dbReference type="Rhea" id="RHEA:19573"/>
            <dbReference type="Rhea" id="RHEA-COMP:9859"/>
            <dbReference type="Rhea" id="RHEA-COMP:14280"/>
            <dbReference type="ChEBI" id="CHEBI:16838"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
        </reaction>
        <physiologicalReaction direction="right-to-left" evidence="4">
            <dbReference type="Rhea" id="RHEA:19575"/>
        </physiologicalReaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the polyphosphate kinase 2 (PPK2) family. Class I subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74689.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008196635.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03938"/>
    <dbReference type="EnsemblBacteria" id="CTQ74689">
        <property type="protein sequence ID" value="CTQ74689"/>
        <property type="gene ID" value="LAX5112_03938"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008976">
        <property type="term" value="F:polyphosphate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016898">
        <property type="entry name" value="Polyphosphate_phosphotransfera"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022488">
        <property type="entry name" value="PPK2-related"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022486">
        <property type="entry name" value="PPK2_PA0141"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03976">
        <property type="entry name" value="PPK2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF028756">
        <property type="entry name" value="PPK2_prd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03707">
        <property type="entry name" value="PPK2_P_aer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 6" id="KW-0418">Kinase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PPK2" evidence="5">
        <location>
            <begin position="46"/>
            <end position="270"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009924"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00024500"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF03976"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ74689.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="301" mass="35861" checksum="6A828E2BA3FF7511" modified="2015-12-09" version="1">MSEDAKTWVENEWADSMDEELEMEIDDFLIAKDLHYIADKKHKSPLDRKTYFHELLMLQAELVKLQDWVQHTGEKIVVIFEGRDAAGKGGVIKRITQRLNPRVARVVALPAPSDREKSQWYFQRYVPHLPAAGEMVLFDRSWYNRSGVERVMGFASEDQVEEFFNDVPEFERMLVRSGIRLIKYWFSITDEEQQLRFLMRIHDPLKQWKLSPMDLESRVRWEDYTKAKEETFERTNIPEAPWFIVEGNDKKQARLNCISHLLSMLPYEDVPHDPVTLPERRFNPDYERKVLPEHLYVPDKY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIM9</accession>
    <name>A0A0M7AIM9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Urease accessory protein UreE</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">ureE1</name>
        <name evidence="5" type="synonym">ureE</name>
        <name evidence="8" type="ORF">LAX5112_03751</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 5">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the UreE family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74080.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008195397.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03751"/>
    <dbReference type="EnsemblBacteria" id="CTQ74080">
        <property type="protein sequence ID" value="CTQ74080"/>
        <property type="gene ID" value="LAX5112_03751"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016151">
        <property type="term" value="F:nickel cation binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051082">
        <property type="term" value="F:unfolded protein binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006457">
        <property type="term" value="P:protein folding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0065003">
        <property type="term" value="P:protein-containing complex assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019627">
        <property type="term" value="P:urea metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00571">
        <property type="entry name" value="UreE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00822">
        <property type="entry name" value="UreE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012406">
        <property type="entry name" value="UreE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007864">
        <property type="entry name" value="UreE_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004029">
        <property type="entry name" value="UreE_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036118">
        <property type="entry name" value="UreE_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05194">
        <property type="entry name" value="UreE_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02814">
        <property type="entry name" value="UreE_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF036402">
        <property type="entry name" value="Ureas_acces_UreE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00988">
        <property type="entry name" value="UreE_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69287">
        <property type="entry name" value="SSF69287"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0143">Chaperone</keyword>
    <keyword evidence="2 5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 5" id="KW-0533">Nickel</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="UreE_N" evidence="7">
        <location>
            <begin position="3"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="136"/>
            <end position="160"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022596"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00822"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="SMART" id="SM00988"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ74080.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="160" mass="17560" checksum="D105612FBA81AA51" modified="2015-12-09" version="1">MIRVASIKPAGEWTGQSADTITLDREDRHRRRAAMTAANGLPFLLDEANAVHLHHGDGLVLEDGRIIEVLAEPEDLVEIHAENTAHLVKIAWHLGNRHLPTQLMGDTLRIRRDHVIEDMVKKLGAKLTALSAPFDPEGGAYGHGQTHGHGHNHGHTHSHG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIR0</accession>
    <name>A0A0M7AIR0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04073</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ74988.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04073"/>
    <dbReference type="EnsemblBacteria" id="CTQ74988">
        <property type="protein sequence ID" value="CTQ74988"/>
        <property type="gene ID" value="LAX5112_04073"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ74988.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="132" mass="14585" checksum="F6875F8966936D06" modified="2015-12-09" version="1">MDAGQELVVQSPVVNPAVSGPLVIAIDRAIEVVEAETRALRANPTTDLKPFEYRKSQALLDLTRARSLVSPSAYTEDVKDRLVDFKNVLKENVDLLTLHMNAVSEVVKMMSRTMLDQESDGTYAAPFPEPAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJ31</accession>
    <name>A0A0M7AJ31_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Alkaline phosphatase</fullName>
            <ecNumber evidence="4">3.1.3.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">phoK_2</name>
        <name evidence="4" type="ORF">LAX5112_03933</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.3.1" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74647.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673229.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03933"/>
    <dbReference type="EnsemblBacteria" id="CTQ74647">
        <property type="protein sequence ID" value="CTQ74647"/>
        <property type="gene ID" value="LAX5112_03933"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004035">
        <property type="term" value="F:alkaline phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd16016">
        <property type="entry name" value="AP-SPAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017850">
        <property type="entry name" value="Alkaline_phosphatase_core_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026263">
        <property type="entry name" value="Alkaline_phosphatase_prok"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002591">
        <property type="entry name" value="Phosphodiest/P_Trfase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01663">
        <property type="entry name" value="Phosphodiest"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF031924">
        <property type="entry name" value="Pi-irrepressible_AP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53649">
        <property type="entry name" value="SSF53649"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809532" evidence="3">
        <location>
            <begin position="24"/>
            <end position="563"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="2">
        <location>
            <begin position="173"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="active site" description="Phosphothreonine intermediate" evidence="1">
        <location>
            <position position="77"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="98"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRSR" id="PIRSR031924-50"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR031924-51"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ74647.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="563" mass="61631" checksum="52E83295CAAE7A84" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJ93</accession>
    <name>A0A0M7AJ93_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Lipopolysaccharide export system permease protein LptG</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">lptG</name>
        <name evidence="7" type="ORF">LAX5112_03878</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74486.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673184.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03878"/>
    <dbReference type="EnsemblBacteria" id="CTQ74486">
        <property type="protein sequence ID" value="CTQ74486"/>
        <property type="gene ID" value="LAX5112_03878"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030923">
        <property type="entry name" value="LptG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005495">
        <property type="entry name" value="LptG/LptF_permease"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33529">
        <property type="entry name" value="PTHR33529"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03739">
        <property type="entry name" value="LptF_LptG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR04408">
        <property type="entry name" value="LptG_lptG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="15"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="100"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="280"/>
            <end position="299"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="306"/>
            <end position="324"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="336"/>
            <end position="359"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ74486.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="364" mass="39930" checksum="B8AB0ECFAACCB64D" modified="2015-12-09" version="1">MILGRTLSVYFSGRFIKAILGLFLFAAVLLFLFDVLELVRRGSDREGFTVMRVAYISLLRVPLLLEQVIPFTVLFGAIAAFVTLSRALELVVTRAAGISVWQFSTPAVLVGLFLGIFSITVYNPAAVYLQQKSEEAAAGLFGADQTFLLQSSGEVWVRQDGLDGESVLRASQLLDNGTRLLRVTVFTFDEDGTFRERIEAEQARLGNETWYLDNAIVYTTENDPQSYSVYQISTFLTATEVRESIGSPESISFWNLPRFIDLARNAGLPAYRYNLQYQSLLARPLLLIAMILIAAAVSLKVSRFGGLGRMILGGILSGFVLYVLTELAKDFGGAGIVPPSVAAWAPGIFGVLMGLTILLHQEDG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJE9</accession>
    <name>A0A0M7AJE9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative HTH-type transcriptional regulator YjiR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yjiR_2</name>
        <name evidence="3" type="ORF">LAX5112_03898</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">In the C-terminal section; belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74546.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673203.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03898"/>
    <dbReference type="EnsemblBacteria" id="CTQ74546">
        <property type="protein sequence ID" value="CTQ74546"/>
        <property type="gene ID" value="LAX5112_03898"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009058">
        <property type="term" value="P:biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07377">
        <property type="entry name" value="WHTH_GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004839">
        <property type="entry name" value="Aminotransferase_I/II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000524">
        <property type="entry name" value="Tscrpt_reg_HTH_GntR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00155">
        <property type="entry name" value="Aminotran_1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00392">
        <property type="entry name" value="GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00345">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50949">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH gntR-type" evidence="2">
        <location>
            <begin position="13"/>
            <end position="81"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005384"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ74546.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="464" mass="49638" checksum="9505780D45BAED4D" modified="2015-12-09" version="1">MTDWCPDLSRSAAPRYLALADSIEEDIASGVLKTGDRLPAQRRLAVQLGLDFTTVARGYNEARRRGVISSLVGSGTFVSGDKNTVPIGALSQNPMRMAAPDFSMNLPPEPSAPELQAKMQKSLRALSADLPALMRYQTFESSEQDVKAAGLWLHQTGLAPDTDRILIAPGAQAALAAILTILTSPGDHIACENITYPGIRSLAAQMGLQLTGLDMDDDGIVPDALEKACKTIDLKALYLNPTIQNPTTYTMPEERRRAIANIAARYGLPILEDDPYSPLLPTAPPPLAALCPRNTWYIGSLSKTIGAGLRVAYVQAPSKKASWQVSRALRTGQVMPAPLTVALATQWILEGTAAEICAAVGRESAERQTLAAHHLQDLAHRTDPNGFHVWLTLDNGWTRSSFASQLRGLEIGVTESDAFTVAGSSAEAVRLCLGGPVARTTLNTALETIASLLDSSPEQASAYF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJF2</accession>
    <name>A0A0M7AJF2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Heme biosynthesis-associated TPR protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_03963</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74757.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673310.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03963"/>
    <dbReference type="EnsemblBacteria" id="CTQ74757">
        <property type="protein sequence ID" value="CTQ74757"/>
        <property type="gene ID" value="LAX5112_03963"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010817">
        <property type="entry name" value="HemY_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016982">
        <property type="entry name" value="Mms48"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07219">
        <property type="entry name" value="HemY_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF031802">
        <property type="entry name" value="UCP031802"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="SSF48452"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="45"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="domain" description="HemY_N" evidence="6">
        <location>
            <begin position="26"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="446"/>
            <end position="650"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="471"/>
            <end position="498"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="566"/>
            <end position="583"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="600"/>
            <end position="628"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="635"/>
            <end position="650"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF07219"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ74757.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="650" mass="70226" checksum="8A13E9D431546C87" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJT6</accession>
    <name>A0A0M7AJT6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Acyltransferase family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_04226</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75425.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673463.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000021.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04226"/>
    <dbReference type="EnsemblBacteria" id="CTQ75425">
        <property type="protein sequence ID" value="CTQ75425"/>
        <property type="gene ID" value="LAX5112_04226"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016747">
        <property type="term" value="F:acyltransferase activity, transferring groups other than amino-acyl groups"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002656">
        <property type="entry name" value="Acyl_transf_3_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01757">
        <property type="entry name" value="Acyl_transf_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="21"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="60"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="90"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="159"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="185"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="222"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="246"/>
            <end position="267"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="326"/>
            <end position="347"/>
        </location>
    </feature>
    <feature type="domain" description="Acyl_transf_3" evidence="2">
        <location>
            <begin position="19"/>
            <end position="343"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01757"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ75425.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="368" mass="41516" checksum="EA5D6D82820A5387" modified="2015-12-09" version="1">MIAPFNQKFSEAFDPRSNNFDLIRIVAACLVIFSHAFPLLALTYEPIAELTNHYETGGGFAVNAFIVISGFLICRSLERATIISYAWSRFLRIVPALAAVTLAQMFVLGPIFTTVSLPDYFSNTSTWSQLKNLTIFNMQFRLETIFMDVPFAQIVNNPLWTLPIESFFYICLPLAFFVGLKGRKYFWLVPVGCLTGLYVMGLSGCSFADQCGASLWTIQHYTTLRLACFFSLGASIWIYRHSIPHSGWIAAGLVVVLALLPTTYLFVRDEVFAVFYSYLVMYAGCLPKLHIKTYEKLGDLSYGTYIVGWPVQQSILTIFGTGFNPYVFGLVAIPPSLVLAYFMWNYIEKPALALKHHPVLTQMMKREA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJU9</accession>
    <name>A0A0M7AJU9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ASCH domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03941</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74696.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673247.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03941"/>
    <dbReference type="EnsemblBacteria" id="CTQ74696">
        <property type="protein sequence ID" value="CTQ74696"/>
        <property type="gene ID" value="LAX5112_03941"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd06553">
        <property type="entry name" value="ASCH_Ef3133_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007374">
        <property type="entry name" value="ASCH_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009326">
        <property type="entry name" value="DUF984"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015947">
        <property type="entry name" value="PUA-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR39203">
        <property type="entry name" value="PTHR39203"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04266">
        <property type="entry name" value="ASCH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF021320">
        <property type="entry name" value="DUF984"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01022">
        <property type="entry name" value="ASCH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88697">
        <property type="entry name" value="SSF88697"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ASCH" evidence="1">
        <location>
            <begin position="16"/>
            <end position="133"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM01022"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74696.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="136" mass="15176" checksum="74507111D647CCAB" modified="2015-12-09" version="1">MTLEELKQKYPGAETFKFGDGPELSSFLIGLVRAGKKTATCGALRDFEGGGEAMPKVGRTDIVLNWDGSPALVVETLELTQTRFCDVSADFALAEGENDTLEGWRQDHQNYFERNGGFDPEMMLVCERFRLIEDCQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="35" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJW7</accession>
    <name>A0A0M7AJW7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Urease subunit alpha</fullName>
            <ecNumber evidence="5">3.5.1.5</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Urea amidohydrolase subunit alpha</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="13" type="primary">ureC1</name>
        <name evidence="5" type="synonym">ureC</name>
        <name evidence="13" type="ORF">LAX5112_03749</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="5 10">
            <text>2 H(+) + H2O + urea = CO2 + 2 NH4(+)</text>
            <dbReference type="Rhea" id="RHEA:20557"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16199"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="EC" id="3.5.1.5"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="5 7 10">
            <name>Ni cation</name>
            <dbReference type="ChEBI" id="CHEBI:25516"/>
        </cofactor>
        <text evidence="5 7 10">Binds 2 nickel ions per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="1 5">Nitrogen metabolism; urea degradation; CO(2) and NH(3) from urea (urease route): step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Heterotrimer of UreA (gamma), UreB (beta) and UreC (alpha) subunits. Three heterotrimers associate to form the active enzyme.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5 9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="PTM">
        <text evidence="6">Carbamylation allows a single lysine to coordinate two nickel ions.</text>
    </comment>
    <comment type="PTM">
        <text evidence="5">Carboxylation allows a single lysine to coordinate two nickel ions.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5 11">Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family.</text>
    </comment>
    <dbReference type="EC" id="3.5.1.5" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74073.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673073.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03749"/>
    <dbReference type="EnsemblBacteria" id="CTQ74073">
        <property type="protein sequence ID" value="CTQ74073"/>
        <property type="gene ID" value="LAX5112_03749"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00258">
        <property type="reaction ID" value="UER00370"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016151">
        <property type="term" value="F:nickel cation binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009039">
        <property type="term" value="F:urease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043419">
        <property type="term" value="P:urea catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd00375">
        <property type="entry name" value="Urease_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01953">
        <property type="entry name" value="Urease_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006680">
        <property type="entry name" value="Amidohydro-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011059">
        <property type="entry name" value="Metal-dep_hydrolase_composite"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032466">
        <property type="entry name" value="Metal_Hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011612">
        <property type="entry name" value="Urease_alpha_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017950">
        <property type="entry name" value="Urease_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005848">
        <property type="entry name" value="Urease_asu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017951">
        <property type="entry name" value="Urease_asu_c"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029754">
        <property type="entry name" value="Urease_Ni-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01979">
        <property type="entry name" value="Amidohydro_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00449">
        <property type="entry name" value="Urease_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01752">
        <property type="entry name" value="UREASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51338">
        <property type="entry name" value="SSF51338"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51556">
        <property type="entry name" value="SSF51556"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01792">
        <property type="entry name" value="urease_alph"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01120">
        <property type="entry name" value="UREASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00145">
        <property type="entry name" value="UREASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51368">
        <property type="entry name" value="UREASE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 5 9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3 5 7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2 5 7" id="KW-0533">Nickel</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Urease" evidence="12">
        <location>
            <begin position="131"/>
            <end position="570"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="5 8 9">
        <location>
            <position position="322"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5 7">
        <location>
            <position position="136"/>
        </location>
        <ligand>
            <name>Ni(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:49786"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5 7">
        <location>
            <position position="138"/>
        </location>
        <ligand>
            <name>Ni(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:49786"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" description="via carbamate group" evidence="5 7">
        <location>
            <position position="219"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5 9">
        <location>
            <position position="221"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5 7">
        <location>
            <position position="248"/>
        </location>
        <ligand>
            <name>Ni(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:49786"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5 7">
        <location>
            <position position="274"/>
        </location>
        <ligand>
            <name>Ni(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:49786"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5 7">
        <location>
            <position position="362"/>
        </location>
        <ligand>
            <name>Ni(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:49786"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="modified residue" description="N6-carboxylysine" evidence="5 6">
        <location>
            <position position="219"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004897"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022596"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01953"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR611612-50"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR611612-51"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR611612-52"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00700"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU000510"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU004158"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS51368"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="CTQ74073.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="570" mass="61042" checksum="9695772036A46417" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AK57</accession>
    <name>A0A0M7AK57_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04267</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75508.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75508">
        <property type="protein sequence ID" value="CTQ75508"/>
        <property type="gene ID" value="LAX5112_04267"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ75508.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="55" mass="6184" checksum="0D585B46942C82F6" modified="2015-12-09" version="1">MRKHIPNWCFGQTEHGGHMAALTHPELMNPLIERALDASCTIASLVHLTYSRILT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKT3</accession>
    <name>A0A0M7AKT3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Chemotaxis protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04087</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ75016.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04087"/>
    <dbReference type="EnsemblBacteria" id="CTQ75016">
        <property type="protein sequence ID" value="CTQ75016"/>
        <property type="gene ID" value="LAX5112_04087"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809565" evidence="1">
        <location>
            <begin position="32"/>
            <end position="411"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75016.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="411" mass="45523" checksum="B32134D845CF21D7" modified="2015-12-09" version="1">MNGCIWPRQVRRLTRIASAAAAILGAVVVFADQAMANQATKEPFEMVRALQSAQEQVASGNDSAAAMQRALLAKMDEIFLQLPPDAWQDPRNARASVIHLLSGGNPEVVRHLLTLTPAPVIDLNLMEASLAYVEGREEDMLTRLADVDPLTLPPSLGGHIALVKAVPYIQTDPVRAMELLQIASLLMPGTLVEEAALRREVLVAGLVGDIERFRTLSIRYLRRYRASVYSGDFRRRFAIALDTLGFVEDQDKFDLLYGVLEEFEDDSRRGLYMRLARSALLGGNLQIASKATDQAQMLAVAGTAEYELLKIYQVATRLNREAVKPNRDLLWSVNKAALTPEDLDFLYAVNTVLNSIRHFPDPPDNFIGAFNSGGTLETPAEREWLTADMELAELLLRRTETMLAHAGDVKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKV6</accession>
    <name>A0A0M7AKV6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Spermidine/putrescine import ATP-binding protein PotA</fullName>
            <ecNumber evidence="9">3.6.3.31</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">potA_3</name>
        <name evidence="9" type="ORF">LAX5112_04111</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.31" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ75082.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75082">
        <property type="protein sequence ID" value="CTQ75082"/>
        <property type="gene ID" value="LAX5112_04111"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008995">
        <property type="entry name" value="Mo/tungstate-bd_C_term_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013611">
        <property type="entry name" value="Transp-assoc_OB_typ2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08402">
        <property type="entry name" value="TOBE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50331">
        <property type="entry name" value="SSF50331"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ABC transporter" evidence="8">
        <location>
            <begin position="46"/>
            <end position="276"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="78"/>
            <end position="85"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ75082.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="410" mass="44654" checksum="73DFD3A589F358CE" modified="2015-12-09" version="1">MLPPIGQFAVEPRPNSRGMPPYGVPPPFFTSPEASKTMTNTPHYDLECAGVTKNFGSFQAVKGVSFDIPSGSFFSILGPSGCGKTTLMRMIAGFDEPNSGDIKIKGKSVLGTPPNKRNVKMVFQHLALFPMMNVYENIAYGLRCTGMNNADIKKRVQDVLERIALPDVGEREIHQLSGGQKQRIAIARCMVLDPDVLLLDEPLGALDLKLREAMKIELKLLQHQFNTTFIYITHDQSEALVMSDNVAIMNQGEFEQIGTPQELYHQPKTAFVAGFVGDSNRWSGTVKSSDGTGGKVETSQGLPMSFSAAGHNTVAEGSKVDIFVRPEFIRTVRASESGTGGIDGDNQMDGVVDSLLFNGANSRVLVRSGNGELIESDVTLTGHNDIKPGEEVRLIWSSKQAMCFAHEERA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANL5</accession>
    <name>A0A0M7ANL5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative mercuric transport protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04368</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75810.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75810">
        <property type="protein sequence ID" value="CTQ75810"/>
        <property type="gene ID" value="LAX5112_04368"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="57"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="91"/>
            <end position="111"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75810.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="128" mass="14021" checksum="C71E5B23B789BC95" modified="2015-12-09" version="1">MMSNTETLQDQENGPNRFVLGSAGLLALLSASCCVLPIGLSIIGLGGSWLTMLGPFVAYRIEILAVVGLVLVWGWFRLWKKWNCARGNRSTLSILSLTTLAFALALSSPIWEGEVTRTMFALWQSTRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANM9</accession>
    <name>A0A0M7ANM9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04688</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000028">
        <property type="protein sequence ID" value="CTQ76725.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673870.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000028.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04688"/>
    <dbReference type="EnsemblBacteria" id="CTQ76725">
        <property type="protein sequence ID" value="CTQ76725"/>
        <property type="gene ID" value="LAX5112_04688"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ76725.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="170" mass="18234" checksum="15B6718899E91F63" modified="2015-12-09" version="1">MKAIKLLTLTLLLVGCQTGLKEGTLVSSFPPEGWETTVTDSRTQYLCNPPACASTELILVDDLPIAGLSEKLIRDGKVGPDVVAKVDAYVTKARKGAYKAEAALPVSTDSYAGFRHKATLTEDGKIIFMAGQSIVQGSRGVIVLSLAHDNETAERNLNSYLIATKVERPQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AP22</accession>
    <name>A0A0M7AP22_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Trifunctional nucleotide phosphoesterase protein YfkN</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">yfkN_5</name>
        <name evidence="5" type="ORF">LAX5112_04503</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the 5'-nucleotidase family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000025">
        <property type="protein sequence ID" value="CTQ76182.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673704.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000025.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04503"/>
    <dbReference type="EnsemblBacteria" id="CTQ76182">
        <property type="protein sequence ID" value="CTQ76182"/>
        <property type="gene ID" value="LAX5112_04503"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0110165">
        <property type="term" value="C:cellular anatomical entity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008252">
        <property type="term" value="F:nucleotidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009166">
        <property type="term" value="P:nucleotide catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.21.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.780.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008334">
        <property type="entry name" value="5'-Nucleotdase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036907">
        <property type="entry name" value="5'-Nucleotdase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006146">
        <property type="entry name" value="5'-Nucleotdase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006179">
        <property type="entry name" value="5_nucleotidase/apyrase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004843">
        <property type="entry name" value="Calcineurin-like_PHP_ApaH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029052">
        <property type="entry name" value="Metallo-depent_PP-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11575">
        <property type="entry name" value="PTHR11575"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02872">
        <property type="entry name" value="5_nucleotid_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00149">
        <property type="entry name" value="Metallophos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01607">
        <property type="entry name" value="APYRASEFAMLY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55816">
        <property type="entry name" value="SSF55816"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56300">
        <property type="entry name" value="SSF56300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00785">
        <property type="entry name" value="5_NUCLEOTIDASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00786">
        <property type="entry name" value="5_NUCLEOTIDASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005732224" evidence="2">
        <location>
            <begin position="24"/>
            <end position="535"/>
        </location>
    </feature>
    <feature type="domain" description="Metallophos" evidence="3">
        <location>
            <begin position="27"/>
            <end position="249"/>
        </location>
    </feature>
    <feature type="domain" description="5_nucleotid_C" evidence="4">
        <location>
            <begin position="337"/>
            <end position="497"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006654"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU362119"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00149"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF02872"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ76182.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="535" mass="56842" checksum="668E67D5C304E735" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AP93</accession>
    <name>A0A0M7AP93_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_04682</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000028">
        <property type="protein sequence ID" value="CTQ76709.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673863.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000028.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04682"/>
    <dbReference type="EnsemblBacteria" id="CTQ76709">
        <property type="protein sequence ID" value="CTQ76709"/>
        <property type="gene ID" value="LAX5112_04682"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.600">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1610">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010621">
        <property type="entry name" value="DUF1214"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037049">
        <property type="entry name" value="DUF1214_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010679">
        <property type="entry name" value="DUF1254"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037050">
        <property type="entry name" value="DUF1254_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06742">
        <property type="entry name" value="DUF1214"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06863">
        <property type="entry name" value="DUF1254"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809507" evidence="1">
        <location>
            <begin position="21"/>
            <end position="488"/>
        </location>
    </feature>
    <feature type="domain" description="DUF1254" evidence="3">
        <location>
            <begin position="82"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="domain" description="DUF1214" evidence="2">
        <location>
            <begin position="365"/>
            <end position="470"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF06742"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF06863"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ76709.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="488" mass="54774" checksum="CBAD6C72D352A2AB" modified="2015-12-09" version="1">MKKLLAAACCALFMGGGALAQQSSPLVEQINNGNWLSDEENREMLDELYYTRAVHAYMSMLPALNVIGMRDGSAAEFGNGYNVLPIWKDRMDSRAWVPTPNGDVIYSMSYLDLKETGPLVVAAPPKVIGMFTDFFQRTITDVGAIGPDRARGGLYLLLPPNYTGHVPEGYFAFESRTYNVFLFFRTVMAQGNGGPDPKPAVDLAMQTRIYPLWDTEKSIKPMEFPNGSGKSINMMYPTDISYFTKLKEFVDYEPYTAISPEERGVLAAIGIIKDKSFEPTARQKELLQKAVERAPKMILALRRDDRADKRNKYYNDRQYVRAWSAATAEYMQESYLDLNQRASFFQYAYSSAPAMVMRTINAGSKYPVALRDKNGDILNGSNTYKLHLPAGIPAAAFWAVTLYNVTDGTMVDAPQQLPSINQYNDVAYEDDGGLSLYFGPAKPDDVPESNWIQTVDGRDFLTVIRLYGAKTEFFDQTWKPDDVVKVNE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APD1</accession>
    <name>A0A0M7APD1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Rhamnolipids biosynthesis 3-oxoacyl-[acyl-carrier-protein] reductase</fullName>
            <ecNumber evidence="1">1.1.1.100</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">rhlG</name>
        <name evidence="1" type="ORF">LAX5112_04767</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.1.1.100" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000030">
        <property type="protein sequence ID" value="CTQ76985.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673930.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000030.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04767"/>
    <dbReference type="EnsemblBacteria" id="CTQ76985">
        <property type="protein sequence ID" value="CTQ76985"/>
        <property type="gene ID" value="LAX5112_04767"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004316">
        <property type="term" value="F:3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ76985.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="273" mass="28477" checksum="D4B60D5CDC6318B5" modified="2015-12-09" version="1">MTPDKLFSLTGKTALVTGGATGIGRMAAEGLCAAGARVLIASRKEEACLRAADDLNTLGYSGIVEGFSGDVATEDGIGALTSEIGKRTDRLDILMNNAGTSWGMPLGQFPYEAWDRVMRLNVTGLFQLTQSLLPMLEASASDDDPARVVNVGSVMGETPHGDRAYSYAASKAAVHHLTKILAKELADKRITVNALAPGPFVSKMTAFATADEDTRSRVGAQVPLGRVGKPEDIAAILQFLCGAGGGYITGAIIPVSGGINVETGPDLFQEAYN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APN0</accession>
    <name>A0A0M7APN0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Pimelyl-[acyl-carrier protein] methyl ester esterase</fullName>
            <ecNumber evidence="2">3.1.1.85</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">bioH</name>
        <name evidence="2" type="ORF">LAX5112_04654</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.1.85" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000027">
        <property type="protein sequence ID" value="CTQ76617.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673835.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000027.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04654"/>
    <dbReference type="EnsemblBacteria" id="CTQ76617">
        <property type="protein sequence ID" value="CTQ76617"/>
        <property type="gene ID" value="LAX5112_04654"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000073">
        <property type="entry name" value="AB_hydrolase_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12697">
        <property type="entry name" value="Abhydrolase_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00111">
        <property type="entry name" value="ABHYDROLASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AB hydrolase-1" evidence="1">
        <location>
            <begin position="4"/>
            <end position="229"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12697"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76617.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="238" mass="26130" checksum="2C4DA71038CB2735" modified="2015-12-09" version="1">MIPLVLVHGFMGGSDQWELQTPLNNTVQLIAIDLPGFGKNAHLDPINSIEKLARWVLNELTEQGVERFLLLGHSMGGMVVQDMIRQAPDRVSRLVLYSTGALGLLPGRFESIETSMQRAKDDGAKATARRIAATWFLQRENAEAYPACAAIAECSSPDAIQAGLEAMRDWSGETSLSSISAPTLVIWGDQDRTYPWPQIQTLWQSVPESSLAVVPGCAHAVHLEEPEIFNHLIGRFVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APZ5</accession>
    <name>A0A0M7APZ5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">(S)-sulfolactate dehydrogenase</fullName>
            <ecNumber evidence="5">1.1.1.310</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">slcC</name>
        <name evidence="5" type="ORF">LAX5112_04645</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.310" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000027">
        <property type="protein sequence ID" value="CTQ76591.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04645"/>
    <dbReference type="EnsemblBacteria" id="CTQ76591">
        <property type="protein sequence ID" value="CTQ76591"/>
        <property type="gene ID" value="LAX5112_04645"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102155">
        <property type="term" value="F:S-sulfolactate dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006139">
        <property type="entry name" value="D-isomer_2_OHA_DH_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029753">
        <property type="entry name" value="D-isomer_DH_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006140">
        <property type="entry name" value="D-isomer_DH_NAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00389">
        <property type="entry name" value="2-Hacid_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02826">
        <property type="entry name" value="2-Hacid_dh_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00671">
        <property type="entry name" value="D_2_HYDROXYACID_DH_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 2 5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="2-Hacid_dh" evidence="3">
        <location>
            <begin position="12"/>
            <end position="310"/>
        </location>
    </feature>
    <feature type="domain" description="2-Hacid_dh_C" evidence="4">
        <location>
            <begin position="109"/>
            <end position="286"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU003719"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00389"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF02826"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ76591.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="313" mass="33140" checksum="4B3BB11D40FE94BE" modified="2015-12-09" version="1">MEKKVVVSEFMDEAALQKFGPAFQVIYDPSLVDDEERLFQKLADADALIVRNRTQVGARLLDAAPNLRVIGRLGVGLENIDLGACAKRGVSVRPATGANTQSVVEYVLGAMLVLRRGAFTSNQEMLDGNWPRPALGAGGEIQGLTLGLLGYGEIAQAVAQVGRAFGMNVIAFDPYLADTDPAWTHVQSCDLEDLLARADVMSLHVPFTDATAGLIGASELSKMKSSALLINTARGEIVDEPALVSALKSGRLTGAAIDVFAQEPLDGAAAAIFKDCPNLILTPHIAGVTRQANVRVSHVTVENVLKVLAKEGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQ58</accession>
    <name>A0A0M7AQ58_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Enterobactin synthase component D</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10">4'-phosphopantetheinyl transferase EntD</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="11">Enterochelin synthase D</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">LAX5112_04786</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Involved in the biosynthesis of the siderophore enterobactin (enterochelin), which is a macrocyclic trimeric lactone of N-(2,3-dihydroxybenzoyl)-serine. The serine trilactone serves as a scaffolding for the three catechol functionalities that provide hexadentate coordination for the tightly ligated iron(2+) atoms. Plays an essential role in the assembly of the enterobactin by catalyzing the transfer of the 4'-phosphopantetheine (Ppant) moiety from coenzyme A to the apo-domains of both EntB (ArCP domain) and EntF (PCP domain) to yield their holo-forms which make them competent for the activation of 2,3-dihydroxybenzoate (DHB) and L-serine, respectively.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>apo-[aryl-carrier protein] + CoA = adenosine 3',5'-bisphosphate + H(+) + holo-[aryl-carrier protein]</text>
            <dbReference type="Rhea" id="RHEA:48404"/>
            <dbReference type="Rhea" id="RHEA-COMP:15903"/>
            <dbReference type="Rhea" id="RHEA-COMP:17557"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:58343"/>
            <dbReference type="ChEBI" id="CHEBI:64479"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>apo-[peptidyl-carrier protein] + CoA = adenosine 3',5'-bisphosphate + H(+) + holo-[peptidyl-carrier protein]</text>
            <dbReference type="Rhea" id="RHEA:46228"/>
            <dbReference type="Rhea" id="RHEA-COMP:11479"/>
            <dbReference type="Rhea" id="RHEA-COMP:11480"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:58343"/>
            <dbReference type="ChEBI" id="CHEBI:64479"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Siderophore biosynthesis; enterobactin biosynthesis.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">EntB, EntD, EntE, and EntF form a multienzyme complex called enterobactin synthase.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the P-Pant transferase superfamily. EntD family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000030">
        <property type="protein sequence ID" value="CTQ77039.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673944.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000030.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04786"/>
    <dbReference type="EnsemblBacteria" id="CTQ77039">
        <property type="protein sequence ID" value="CTQ77039"/>
        <property type="gene ID" value="LAX5112_04786"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00017"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009366">
        <property type="term" value="C:enterobactin synthetase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008897">
        <property type="term" value="F:holo-[acyl-carrier-protein] synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009239">
        <property type="term" value="P:enterobactin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.470.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008278">
        <property type="entry name" value="4-PPantetheinyl_Trfase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037143">
        <property type="entry name" value="4-PPantetheinyl_Trfase_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041354">
        <property type="entry name" value="4PPT_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003542">
        <property type="entry name" value="Enbac_synth_compD-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38096">
        <property type="entry name" value="PTHR38096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17837">
        <property type="entry name" value="4PPT_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01648">
        <property type="entry name" value="ACPS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01399">
        <property type="entry name" value="ENTSNTHTASED"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56214">
        <property type="entry name" value="SSF56214"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0259">Enterobactin biosynthesis</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 14" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="4PPT_N" evidence="13">
        <location>
            <begin position="28"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="domain" description="ACPS" evidence="12">
        <location>
            <begin position="102"/>
            <end position="176"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003937"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004993"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008342"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011503"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00019087"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023191"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00029306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00029345"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00029894"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00031996"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF01648"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF17837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="CTQ77039.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="223" mass="24336" checksum="4FD5F743B9679E1C" modified="2015-12-09" version="1">MLWDLFPDGVQIAVGDPRAGEPTGYPDEEAHVSSAVSSRRSEFFAGRECARKAIADLGFQPTVIGVHPDRSPIWPNGLIGTISHSSTLCLAAVARQKDDALSIGLDIEPDSPLPEGMWDTICTSNERTWLDGLPGGQSARQALRIFTAKESAYKAQYPLTQEFFEFEDLEISFDGHDFFAMLQRSVPGFSRGTKLRGRQVIYNGHVVSAVCVGSDQFKKGAVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQ75</accession>
    <name>A0A0M7AQ75_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04418</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75943.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75943">
        <property type="protein sequence ID" value="CTQ75943"/>
        <property type="gene ID" value="LAX5112_04418"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ75943.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="61" mass="6601" checksum="05B4DF2466D6D455" modified="2015-12-09" version="1">MKGAFPFEIRCRFSPGCHACTRASTFGSEAATDYLQMTPSKTSRVGHLSVAELAGKLLSFM</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQ97</accession>
    <name>A0A0M7AQ97_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 7">Carbamoyl-phosphate synthase small chain</fullName>
            <ecNumber evidence="7">6.3.5.5</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6 7">Carbamoyl-phosphate synthetase glutamine chain</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7 9" type="primary">carA</name>
        <name evidence="9" type="ORF">LAX5112_04714</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>2 ATP + H2O + hydrogencarbonate + L-glutamine = 2 ADP + carbamoyl phosphate + 2 H(+) + L-glutamate + phosphate</text>
            <dbReference type="Rhea" id="RHEA:18633"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17544"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58228"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.5.5"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1 7">Amino-acid biosynthesis; L-arginine biosynthesis; carbamoyl phosphate from bicarbonate: step 1/1.</text>
    </comment>
    <comment type="pathway">
        <text evidence="7">Pyrimidine metabolism; UMP biosynthesis via de novo pathway; (S)-dihydroorotate from bicarbonate: step 1/3.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Composed of two chains; the small (or glutamine) chain promotes the hydrolysis of glutamine to ammonia, which is used by the large (or ammonia) chain to synthesize carbamoyl phosphate.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the CarA family.</text>
    </comment>
    <dbReference type="EC" id="6.3.5.5" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000029">
        <property type="protein sequence ID" value="CTQ76817.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673912.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000029.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04714"/>
    <dbReference type="EnsemblBacteria" id="CTQ76817">
        <property type="protein sequence ID" value="CTQ76817"/>
        <property type="gene ID" value="LAX5112_04714"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00068">
        <property type="reaction ID" value="UER00171"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00070">
        <property type="reaction ID" value="UER00115"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004088">
        <property type="term" value="F:carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006207">
        <property type="term" value="P:'de novo' pyrimidine nucleobase biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044205">
        <property type="term" value="P:'de novo' UMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006526">
        <property type="term" value="P:arginine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006541">
        <property type="term" value="P:glutamine metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01744">
        <property type="entry name" value="GATase1_CPSase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.30.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01209">
        <property type="entry name" value="CPSase_S_chain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006274">
        <property type="entry name" value="CarbamoylP_synth_ssu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002474">
        <property type="entry name" value="CarbamoylP_synth_ssu_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036480">
        <property type="entry name" value="CarbP_synth_ssu_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035686">
        <property type="entry name" value="CPSase_GATase1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017926">
        <property type="entry name" value="GATASE"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00988">
        <property type="entry name" value="CPSase_sm_chain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00117">
        <property type="entry name" value="GATase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01097">
        <property type="entry name" value="CPSase_sm_chain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52021">
        <property type="entry name" value="SSF52021"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="SSF52317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01368">
        <property type="entry name" value="CPSaseIIsmall"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="4 7" id="KW-0055">Arginine biosynthesis</keyword>
    <keyword evidence="7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 7" id="KW-0315">Glutamine amidotransferase</keyword>
    <keyword evidence="7 9" id="KW-0436">Ligase</keyword>
    <keyword evidence="7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-0665">Pyrimidine biosynthesis</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CPSase_sm_chain" evidence="8">
        <location>
            <begin position="12"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="region of interest" description="CPSase" evidence="7">
        <location>
            <begin position="1"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="7">
        <location>
            <position position="282"/>
        </location>
    </feature>
    <feature type="active site" evidence="7">
        <location>
            <position position="366"/>
        </location>
    </feature>
    <feature type="active site" evidence="7">
        <location>
            <position position="368"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005077"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007800"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00019036"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022571"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00030197"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01209"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="SMART" id="SM01097"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ76817.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="393" mass="41661" checksum="B2BBB36C657FAA2A" modified="2015-12-09" version="1">MTTADAWSDTPATALLVLSDGSVIEGYGLGATGQAVGEICFNTAMTGYQEILTDPSYSGQIITFTFPHIGNVGTNGEDIETVNMAADSGIRGTVLAASITDPANYRAAQHLDAWLKSRNIIGISGVDTRALTALIREKGVPNGVIAHDPDGNFDLDNLKLTAANWPGLVGMDLAKDVSTTQTHRWSQKTWAWDEGYLDADGGKFKVVALDFGIKRNILRLLTDAGCDVTVLPANATSEDILAHKPDGVFLSNGPGDPAATGAYAVGTIKSVIDAGLPVFGICLGHQMLALALGGKTIKMHQGHHGANHPVLDQTSGKVEITSMNHGFAVDAESLPDNVQQTHVSLFDGSNCGLEMKDKPVFSVQYHPEASPGPRDSRYLFKRFTDLMETAKAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASJ3</accession>
    <name>A0A0M7ASJ3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Tyrosine-protein kinase ptk</fullName>
            <ecNumber evidence="8">2.7.10.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">ptk</name>
        <name evidence="8" type="ORF">LAX5112_04698</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EC" id="2.7.10.-" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000028">
        <property type="protein sequence ID" value="CTQ76753.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04698"/>
    <dbReference type="EnsemblBacteria" id="CTQ76753">
        <property type="protein sequence ID" value="CTQ76753"/>
        <property type="gene ID" value="LAX5112_04698"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009103">
        <property type="term" value="P:lipopolysaccharide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003856">
        <property type="entry name" value="LPS_length_determ_N_term"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02706">
        <property type="entry name" value="Wzz"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8" id="KW-0418">Kinase</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0808">Transferase</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="35"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="223"/>
            <end position="247"/>
        </location>
    </feature>
    <feature type="domain" description="Wzz" evidence="7">
        <location>
            <begin position="28"/>
            <end position="112"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF02706"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ76753.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="523" mass="56324" checksum="DAE4A35482FEAA34" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AUL7</accession>
    <name>A0A0M7AUL7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04922</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000035">
        <property type="protein sequence ID" value="CTQ77483.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77483">
        <property type="protein sequence ID" value="CTQ77483"/>
        <property type="gene ID" value="LAX5112_04922"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ77483.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="264" mass="28787" checksum="6AC465620C7A215E" modified="2015-12-09" version="1">MGVIKIFIANDKGGVGKSLVAQFCVLALDANGLDPDIIEYDNQPKMRSMFGADRVETNSIGLSADGSRDQDEGVVSWDPLLENLLSNNSFVVDFGAQAWAGFSEWAESIDLGQYYKGKGLSIIVPVTADREALNGAIRVLKSARELLPAAKIHVLKVNKDGDVDDLEGIPEYKMLFTMVETCKAKVKDLPTLRAKGLPVLFSLNYSLDRIVNTPLEDLPLGDLPMASRARLIASVKDWLGEANKVLLSALISVKKVGGTRLRRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZND2</accession>
    <name>A0A0M6ZND2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Nicotinamide-nucleotide amidohydrolase PncC</fullName>
            <ecNumber evidence="2">3.5.1.42</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">pncC</name>
        <name evidence="2" type="ORF">LAX5112_00238</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.5.1.42" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64268.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670314.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00238"/>
    <dbReference type="EnsemblBacteria" id="CTQ64268">
        <property type="protein sequence ID" value="CTQ64268"/>
        <property type="gene ID" value="LAX5112_00238"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019159">
        <property type="term" value="F:nicotinamide-nucleotide amidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.950.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036653">
        <property type="entry name" value="CinA-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008136">
        <property type="entry name" value="CinA_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02464">
        <property type="entry name" value="CinA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF142433">
        <property type="entry name" value="SSF142433"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00199">
        <property type="entry name" value="PncC_domain"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CinA" evidence="1">
        <location>
            <begin position="14"/>
            <end position="167"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64268.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="169" mass="17164" checksum="0E90B7FCB41DA0C8" modified="2015-12-09" version="1">MSGKHPANLSDFGTLAASVLDAMKARNMMVATAESCTGGLIAGSLTDIAGSSAVVDRGFVTYSNDAKTDMLGVPAQLIDKVGAVSKDVAIAMAEGALAKSKADIAVSVTGIAGPGGGSDEKPVGTVHIAVAVKKKPTRHLHCWFADNGRTSIRLETVQTALTALLDALD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZNU5</accession>
    <name>A0A0M6ZNU5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Bacteriophytochrome cph2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">cph2_1</name>
        <name evidence="4" type="ORF">LAX5112_00296</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64435.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670273.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00296"/>
    <dbReference type="EnsemblBacteria" id="CTQ64435">
        <property type="protein sequence ID" value="CTQ64435"/>
        <property type="gene ID" value="LAX5112_00296"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01948">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.450">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001633">
        <property type="entry name" value="EAL_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035919">
        <property type="entry name" value="EAL_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000160">
        <property type="entry name" value="GGDEF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00563">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00990">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00052">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00267">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141868">
        <property type="entry name" value="SSF141868"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50883">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50887">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="179"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="domain" description="GGDEF" evidence="3">
        <location>
            <begin position="249"/>
            <end position="386"/>
        </location>
    </feature>
    <feature type="domain" description="EAL" evidence="2">
        <location>
            <begin position="395"/>
            <end position="645"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ64435.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="653" mass="72020" checksum="14D73DE4894ABF7D" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPC9</accession>
    <name>A0A0M6ZPC9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Cobalamin biosynthesis protein CobD</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">cobD</name>
        <name evidence="11" type="ORF">LAX5112_00136</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.</text>
    </comment>
    <comment type="pathway">
        <text evidence="3 10">Cofactor biosynthesis; adenosylcobalamin biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 10">Cell membrane</location>
            <topology evidence="2 10">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 10">Belongs to the CobD/CbiB family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63980.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670161.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00136"/>
    <dbReference type="EnsemblBacteria" id="CTQ63980">
        <property type="protein sequence ID" value="CTQ63980"/>
        <property type="gene ID" value="LAX5112_00136"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00148"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015420">
        <property type="term" value="F:ABC-type vitamin B12 transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048472">
        <property type="term" value="F:threonine-phosphate decarboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009236">
        <property type="term" value="P:cobalamin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00024">
        <property type="entry name" value="CobD_CbiB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004485">
        <property type="entry name" value="Cobalamin_biosynth_CobD/CbiB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34308">
        <property type="entry name" value="PTHR34308"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03186">
        <property type="entry name" value="CobD_Cbib"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00380">
        <property type="entry name" value="cobD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 10" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 10" id="KW-0169">Cobalamin biosynthesis</keyword>
    <keyword evidence="9 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8 10" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="61"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="87"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="304"/>
            <end position="324"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004953"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00006263"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022573"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00024"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ63980.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="325" mass="34893" checksum="F8672018899DC3F9" modified="2015-12-09" version="1">MLLYENALWLLLAALILDGIVGDPDWLWRRLPHPVVWIGKVISALDQTLNRKDWRPQTRRVTGIVTLLILLVSSLELGFLVQEFATAIPFGEFLIVVIAAVLIAQKSLYEHVAAVRIGLLNNGLAGGQQAVAMIVGRDPNSLDEAGVSRAAIESCAENFSDGIVAPVFWFAVLGLPGLIAYKAVNTADSMIGHKNEMYTDFGWASARFDDLINLPASRLSGMFLALAAPLAGGSVRKSFSAMVRDAKQHRSPNAGWPEAAMAGALGLALAGPRTYPGYTVDDPYMNANGRRDATADDISRGLKVLVGAYGIEAALVLLLAVLFLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZR78</accession>
    <name>A0A0M6ZR78_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00570</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65275.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ65275">
        <property type="protein sequence ID" value="CTQ65275"/>
        <property type="gene ID" value="LAX5112_00570"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.410">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010607">
        <property type="entry name" value="DUF1194"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036465">
        <property type="entry name" value="vWFA_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06707">
        <property type="entry name" value="DUF1194"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53300">
        <property type="entry name" value="SSF53300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005808914" evidence="1">
        <location>
            <begin position="33"/>
            <end position="283"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65275.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="283" mass="31205" checksum="3ADB59E6080D67B5" modified="2015-12-09" version="1">MRLDSTQNCALKAFKLLLFLCVATVFSTQTQARDFLRSPLVSAQYSYDPANEVDVELVLAVDISQSMDTEEQEIQRAGYISALTSQEFLDAIQVGPIGKIAITYMEWGGVDEHFVVADWTVVQDAASAAHFASKVSEAPLRQVQRTSISSALEKSVWMVQSNKYTGLRQVIDISGDGPNNQGGSVTAMRDRMVNSGVTINGLPLMMKSNKNTWQAMLNLDHYYEDCVIGGPGSFAIPVRSKEGFADAIRMKLVMEIAGISMPEPDNYFHTVSAREPVRCNLFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRU3</accession>
    <name>A0A0M6ZRU3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">LIV-I protein F</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">livF_3</name>
        <name evidence="5" type="ORF">LAX5112_00454</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64941.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670412.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00454"/>
    <dbReference type="EnsemblBacteria" id="CTQ64941">
        <property type="protein sequence ID" value="CTQ64941"/>
        <property type="gene ID" value="LAX5112_00454"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="6"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="39"/>
            <end position="46"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ64941.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="242" mass="25822" checksum="8AFD984B5ACAC8D0" modified="2015-12-09" version="1">MPDAVLSVDNVTAGYVPDLPILRDVSVTAEQEKLTVIIGPNGAGKSTLIKAVIGLLPVSRGSITANGQDITGLSPDRMTSAGIAYVPQTDNVFRTLTIRQNLDLALQRHAHATERLSDLYERFPVLADKQRDKAGSLSGGQRQFLAVAMALAADPVLILMDEPSAGLSPKAAEEVLDHAKQLTGFGVTILLVEQNVKQALKRADHCYVLAEGRNQIDGPATDLLQDPALGRIYLGGDRRVPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSN3</accession>
    <name>A0A0M6ZSN3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Carboxylesterase 2</fullName>
            <ecNumber evidence="2">3.1.1.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">estB</name>
        <name evidence="2" type="ORF">LAX5112_00592</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.1.1" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65337.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670519.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00592"/>
    <dbReference type="EnsemblBacteria" id="CTQ65337">
        <property type="protein sequence ID" value="CTQ65337"/>
        <property type="gene ID" value="LAX5112_00592"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0080030">
        <property type="term" value="F:methyl indole-3-acetate esterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003140">
        <property type="entry name" value="PLipase/COase/thioEstase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02230">
        <property type="entry name" value="Abhydrolase_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Abhydrolase_2" evidence="1">
        <location>
            <begin position="22"/>
            <end position="219"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02230"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65337.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="222" mass="23536" checksum="12C0E1A2A84E1B4E" modified="2015-12-09" version="1">MTSSSFSPSLDGPRLAPLSRGAVEQLVVILHGYGADGTDLIDLGRAWQEALPNAAFVAPNAPEPLPFEAFGGRQWFALEERTPREYEIGAHAAQPVLDRFLDAELISLGLNDAALALVGFSQGAMMTFQAGLRRKTPPACLVAFSGLLPGIAALPILPAPPPTLIVHGADDDVVPAYHLEAARTALMQAGVTVEAHCLDDLGHGIDERGLILGRQFLEKAFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZST7</accession>
    <name>A0A0M6ZST7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Invasion protein B, involved in pathogenesis</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00317</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64493.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00317"/>
    <dbReference type="EnsemblBacteria" id="CTQ64493">
        <property type="protein sequence ID" value="CTQ64493"/>
        <property type="gene ID" value="LAX5112_00317"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038696">
        <property type="entry name" value="IalB_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010642">
        <property type="entry name" value="Invasion_prot_B"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06776">
        <property type="entry name" value="IalB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="283"/>
            <end position="314"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64493.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="317" mass="34831" checksum="61960E788728BA3D" modified="2015-12-09" version="1">MANSDVRAVFAQLLFSECRVQLNISNAENRLILISKAYHKEIKAARRTSRKLLDIQNCFADRKVRCISVTLLPKLDVLPWKTDMKARPGLAVVCGMSQNSAKICTSTIEDVSMKSVLKRGLIAGAAAALVTLSSFASAPAIAQEEESPWTKACNANEQTNNKEVCFISIELRTNTGQFLSNVAIQEVEGEARKKLLVAVPTGVLIQPGVRIQIDDSKPVQGKYSICAPNACYAELAIDSNFVNAMKQGGGMRVIPFNQQGKEIAFDVTLIGFTKVYDGEPMDIAELQKRQEELQNELQKRADEARQKLIDAQNAANQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUL7</accession>
    <name>A0A0M6ZUL7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Acetate kinase</fullName>
            <ecNumber evidence="6">2.7.2.1</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Acetokinase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8" type="primary">ackA_1</name>
        <name evidence="6" type="synonym">ackA</name>
        <name evidence="8" type="ORF">LAX5112_00549</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>acetate + ATP = acetyl phosphate + ADP</text>
            <dbReference type="Rhea" id="RHEA:11352"/>
            <dbReference type="ChEBI" id="CHEBI:22191"/>
            <dbReference type="ChEBI" id="CHEBI:30089"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.2.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <cofactor evidence="6">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
        <text evidence="6">Mg(2+). Can also accept Mn(2+).</text>
    </comment>
    <comment type="pathway">
        <text evidence="6">Metabolic intermediate biosynthesis; acetyl-CoA biosynthesis; acetyl-CoA from acetate: step 1/2.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 6 7">Belongs to the acetokinase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.2.1" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65214.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670487.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00549"/>
    <dbReference type="EnsemblBacteria" id="CTQ65214">
        <property type="protein sequence ID" value="CTQ65214"/>
        <property type="gene ID" value="LAX5112_00549"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00340">
        <property type="reaction ID" value="UER00458"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008776">
        <property type="term" value="F:acetate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006085">
        <property type="term" value="P:acetyl-CoA biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006082">
        <property type="term" value="P:organic acid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00020">
        <property type="entry name" value="Acetate_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004372">
        <property type="entry name" value="Ac/propionate_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000890">
        <property type="entry name" value="Aliphatic_acid_kin_short-chain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023865">
        <property type="entry name" value="Aliphatic_acid_kinase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21060">
        <property type="entry name" value="PTHR21060"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00871">
        <property type="entry name" value="Acetate_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000722">
        <property type="entry name" value="Acetate_prop_kin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00471">
        <property type="entry name" value="ACETATEKNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="SSF53067"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00016">
        <property type="entry name" value="ackA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01075">
        <property type="entry name" value="ACETATE_KINASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01076">
        <property type="entry name" value="ACETATE_KINASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 6 7" id="KW-0418">Kinase</keyword>
    <keyword evidence="6" id="KW-0460">Magnesium</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6 7" id="KW-0808">Transferase</keyword>
    <feature type="active site" description="Proton donor/acceptor" evidence="6">
        <location>
            <position position="146"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="9"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="16"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="89"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="204"/>
            <end position="208"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="279"/>
            <end position="281"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="324"/>
            <end position="328"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="375"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="site" description="Transition state stabilizer" evidence="6">
        <location>
            <position position="177"/>
        </location>
    </feature>
    <feature type="site" description="Transition state stabilizer" evidence="6">
        <location>
            <position position="237"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008748"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00020"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003835"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ65214.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="394" mass="42072" checksum="CEB758ADE154908A" modified="2015-12-09" version="1">MAPVILVLNSGSSSIKFSLYDGPAEQITGQISGLGAKPHLNLEALLSGRKIDRALDSTDGSSHGAALGALLPILNEELGGRSVAAVGHRVVHGGTKHDLPVRITGAVMQELRVLEPLAPLHQPHNLAGIEAARAAFPGAEQVACFDTAFHRKHPWVNDTFALPRSFYDEGVRRYGFHGLSYEYICEHLKKHTPDAYEGKVIVAHLGNGASMCAIRAGQSIGSTMGFTALDGLPMGTRCGQLDPGVILYLMTTKGMSADEISDLLYKKSGLKGLSGLSQDMRTLSQSDDPRAAEAIEYYVFRVRRELGAMAAVLSGVDTLVFTGGIGENSALIRERVCADQEWLGIQFDPALNNAGDGAISTQSSKVAVLVVPTNEEEMIRRHTEALLASHQVPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUP9</accession>
    <name>A0A0M6ZUP9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 7">Thymidine phosphorylase</fullName>
            <ecNumber evidence="4 7">2.4.2.4</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">TdRPase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7 9" type="primary">deoA</name>
        <name evidence="9" type="ORF">LAX5112_00560</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>phosphate + thymidine = 2-deoxy-alpha-D-ribose 1-phosphate + thymine</text>
            <dbReference type="Rhea" id="RHEA:16037"/>
            <dbReference type="ChEBI" id="CHEBI:17748"/>
            <dbReference type="ChEBI" id="CHEBI:17821"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57259"/>
            <dbReference type="EC" id="2.4.2.4"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="7">Pyrimidine metabolism; dTMP biosynthesis via salvage pathway; dTMP from thymine: step 1/2.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3 7">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family.</text>
    </comment>
    <dbReference type="EC" id="2.4.2.4" evidence="4 7"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65244.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670495.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00560"/>
    <dbReference type="EnsemblBacteria" id="CTQ65244">
        <property type="protein sequence ID" value="CTQ65244"/>
        <property type="gene ID" value="LAX5112_00560"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00578">
        <property type="reaction ID" value="UER00638"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004645">
        <property type="term" value="F:1,4-alpha-oligoglucan phosphorylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016154">
        <property type="term" value="F:pyrimidine-nucleoside phosphorylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009032">
        <property type="term" value="F:thymidine phosphorylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006206">
        <property type="term" value="P:pyrimidine nucleobase metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046104">
        <property type="term" value="P:thymidine metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1030.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1170.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01628">
        <property type="entry name" value="Thymid_phosp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000312">
        <property type="entry name" value="Glycosyl_Trfase_fam3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017459">
        <property type="entry name" value="Glycosyl_Trfase_fam3_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036320">
        <property type="entry name" value="Glycosyl_Trfase_fam3_N_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035902">
        <property type="entry name" value="Nuc_phospho_transferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036566">
        <property type="entry name" value="PYNP-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013102">
        <property type="entry name" value="PYNP_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018090">
        <property type="entry name" value="Pyrmidine_PPas_bac/euk"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017872">
        <property type="entry name" value="Pyrmidine_PPase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000053">
        <property type="entry name" value="Thymidine/pyrmidine_PPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013465">
        <property type="entry name" value="Thymidine_Pase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10515">
        <property type="entry name" value="PTHR10515"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02885">
        <property type="entry name" value="Glycos_trans_3N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00591">
        <property type="entry name" value="Glycos_transf_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07831">
        <property type="entry name" value="PYNP_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000478">
        <property type="entry name" value="TP_PyNP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00941">
        <property type="entry name" value="PYNP_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47648">
        <property type="entry name" value="SSF47648"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52418">
        <property type="entry name" value="SSF52418"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54680">
        <property type="entry name" value="SSF54680"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02643">
        <property type="entry name" value="T_phosphoryl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02644">
        <property type="entry name" value="Y_phosphoryl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00647">
        <property type="entry name" value="THYMID_PHOSPHORYLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 7 9" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 7 9" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PYNP_C" evidence="8">
        <location>
            <begin position="347"/>
            <end position="421"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000749"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006915"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01628"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="SMART" id="SM00941"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ65244.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="438" mass="45185" checksum="694B605EA00D7963" modified="2015-12-09" version="1">MLPQELIRKKRDGGSLSSEEIAFFVKGLADGSVTEGQVSALAMAVFFKGLTIDERVALTLAMRDSGDVLDWSDIEAPVLDKHSTGGVGDNVSLMLAPALAACGAAVPMISGRGLGHTGGTLDKFDSIPGYKTQPDNPLFKKVVKEVGCAVIGQTGNLAPADKRFYGIRDVTATVESIDLITASILSKKLAAGLQGLVLDVKWGSGAFMATLEEARALAESLVLVANGAGLKTTALLTDMNEPLASAAGNAIEMQNAVDFLKGTAIDNRLWDVTVAQGGELLASGGLAPDAEAGCDMMRTAFESGKAAEKFAEMVSALGGPADFMEKPELYLAKANFDAPVYPFEDGVVTEIDARGVGVAVVALGGGRKAAADVIDPSVGFTSLAGVGNSVDADSPLAIVHARNEEEAEAAAIALRAAYTVGSAKDVMDRPSVVERIAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUW0</accession>
    <name>A0A0M6ZUW0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Acetyl coenzyme A synthetase (ADP forming), alpha domain</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01001</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66528.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008196180.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01001"/>
    <dbReference type="EnsemblBacteria" id="CTQ66528">
        <property type="protein sequence ID" value="CTQ66528"/>
        <property type="gene ID" value="LAX5112_01001"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003781">
        <property type="entry name" value="CoA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13380">
        <property type="entry name" value="CoA_binding_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00881">
        <property type="entry name" value="CoA_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CoA_binding" evidence="1">
        <location>
            <begin position="14"/>
            <end position="111"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00881"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66528.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="176" mass="19356" checksum="71C3AAE473827250" modified="2015-12-09" version="1">MDHNSYSDTYIKAILDEVKTIAMIGASANTVRPSYFVLKYMLSKGYDVWPINPGQAGKEILGQKVYASLEDLPGTPDMIDIFRNSEAAGQIVDDVIASGKLPKVIWMQLTVCHKEAAQRAEAEGIKVVMDRCPKIEYGRLSGEIGWAGVNSRTLSSKRPALKAGFQHRGLTPNKKT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVH7</accession>
    <name>A0A0M6ZVH7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Lipopolysaccharide export system ATP-binding protein LptB</fullName>
            <ecNumber evidence="5">3.6.3.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">lptB_3</name>
        <name evidence="5" type="ORF">LAX5112_00923</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.6.3.-" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66246.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670807.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00923"/>
    <dbReference type="EnsemblBacteria" id="CTQ66246">
        <property type="protein sequence ID" value="CTQ66246"/>
        <property type="gene ID" value="LAX5112_00923"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="8"/>
            <end position="251"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="40"/>
            <end position="47"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ66246.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="256" mass="27792" checksum="4C1DF2A2E41DCE59" modified="2015-12-09" version="1">MTKEHPILETKDLTIRFGGHVAVDHVSCAFDRGTLTAIVGPNGAGKTTYFNLMSGQLTATSGKVLLNGENITRMPVPERTDKGIGRAFQLTNLFPTLTVRENVRLVAQAKARQGFDLLSIAESHVDLIERADHVLNEVRLIDQADQTVSALPHGDQRKLEVAMLIALGPQVLMFDEPTAGMSVDEVPVILELIGKLKVDMDRTILLVEHKMDVIRSLADRIIVLHNGALVADGDPAEVIALPVVQEAYLGKTPEAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVU4</accession>
    <name>A0A0M6ZVU4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Type VI secretion lipoprotein, family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01138</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66909.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_050776091.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01138"/>
    <dbReference type="EnsemblBacteria" id="CTQ66909">
        <property type="protein sequence ID" value="CTQ66909"/>
        <property type="gene ID" value="LAX5112_01138"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.4150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017734">
        <property type="entry name" value="T6SS_SciN"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038706">
        <property type="entry name" value="Type_VI_SciN-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37625">
        <property type="entry name" value="PTHR37625"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12790">
        <property type="entry name" value="T6SS-SciN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03352">
        <property type="entry name" value="VI_chp_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ66909.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="163" mass="18023" checksum="F59BD288E2EE301F" modified="2015-12-09" version="1">MSLTRRSACIGLLGVPIVISAGCARTAKPTPIKIELQADANVNPNENGDPAPVVVRVYELKELTAFQNGSFFDFADNDKKLLGGDLVGSAEYELTPGQTVDYNRSISSEARYIGVVAAFRDIESAQWQDSIELEQEKKNEFVIYLTTLAVRIQKLRNRRLGVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZW67</accession>
    <name>A0A0M6ZW67_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00997</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66517.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670904.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ66517">
        <property type="protein sequence ID" value="CTQ66517"/>
        <property type="gene ID" value="LAX5112_00997"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018679">
        <property type="entry name" value="DUF2161"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09929">
        <property type="entry name" value="DUF2161"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ66517.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="224" mass="24827" checksum="D368113E90007931" modified="2015-12-09" version="1">MARILETELYEPVKAFLENQGYEVKAEVGAADIVACRGDDDPVIVELKTGFTLSLFHQAIDRQGMTDTVYIAVARGSGRRFQTTLKSNLKLARRLGLGLITVRLADQLVEVHADPAPFTPRKMKPRKDRLLREFARRVGDPNTGGSTRVTLVTAYRQDATRCAQYLKENGPSRGAEVAKATGVDRATRIMADDHYGWFERVERGIYGLTPKGAEVTSKRSDKSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZX39</accession>
    <name>A0A0M6ZX39_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">HTH-type transcriptional repressor YvoA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yvoA_2</name>
        <name evidence="2" type="ORF">LAX5112_01100</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66806.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670965.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01100"/>
    <dbReference type="EnsemblBacteria" id="CTQ66806">
        <property type="protein sequence ID" value="CTQ66806"/>
        <property type="gene ID" value="LAX5112_01100"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07377">
        <property type="entry name" value="WHTH_GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1410.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028978">
        <property type="entry name" value="Chorismate_lyase_/UTRA_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000524">
        <property type="entry name" value="Tscrpt_reg_HTH_GntR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011663">
        <property type="entry name" value="UTRA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00392">
        <property type="entry name" value="GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07702">
        <property type="entry name" value="UTRA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00035">
        <property type="entry name" value="HTHGNTR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00345">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00866">
        <property type="entry name" value="UTRA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64288">
        <property type="entry name" value="SSF64288"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50949">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH gntR-type" evidence="1">
        <location>
            <begin position="11"/>
            <end position="79"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66806.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="236" mass="26682" checksum="593F7B9A5C5E38A0" modified="2015-12-09" version="1">MPTASQTSNALPLYVQISELLIRDIAAGRLLDGERLPPERDMAEELGISIGTLRKALADLTEKGLLERIQGSGNYIRQGGTNESVYAMFRLELLSGGGLPKADILEVDRVSKPEDLPAFGASGEGTRIRRLRYLNETIIAVEEIWLDGDCGFVRKDQLSDSLYRFYQKQLGFWIVRAEDRVTIKAVPDWAPEVFTKAPGILTGYIERFSWADKPEPVEYSRTWFDTDRAHYVQRLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYA7</accession>
    <name>A0A0M6ZYA7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01459</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67629.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008189983.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01459"/>
    <dbReference type="EnsemblBacteria" id="CTQ67629">
        <property type="protein sequence ID" value="CTQ67629"/>
        <property type="gene ID" value="LAX5112_01459"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021473">
        <property type="entry name" value="DUF3126"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11324">
        <property type="entry name" value="DUF3126"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67629.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="71" mass="8452" checksum="94BBFA1474564C9B" modified="2015-12-09" version="1">MNPEEIRKLEAYLRKKFDLPSMQVRARPKKDDSAEVYIGEEFIGVIFRDDEDEDLSWNFQMAILEIDLDEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYI2</accession>
    <name>A0A0M6ZYI2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01020</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66583.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008190198.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ66583">
        <property type="protein sequence ID" value="CTQ66583"/>
        <property type="gene ID" value="LAX5112_01020"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ66583.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="61" mass="7076" checksum="4B75B73C7A8FA6DE" modified="2015-12-09" version="1">MQLPELFHKEYQGFLLETGFDDPDPQSLLMELASLSMEVYLKEIAWLSDFLGRLEKGREVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYL3</accession>
    <name>A0A0M6ZYL3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Putative esterase of the alpha/beta hydrolase fold protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01562</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67898.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671354.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01562"/>
    <dbReference type="EnsemblBacteria" id="CTQ67898">
        <property type="protein sequence ID" value="CTQ67898"/>
        <property type="gene ID" value="LAX5112_01562"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010662">
        <property type="entry name" value="Hydrolase_RBBP9/YdeN"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06821">
        <property type="entry name" value="Ser_hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67898.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="184" mass="20525" checksum="1D91EA9884D57C7F" modified="2015-12-09" version="1">MKISETDILLIPGYGKTLPGHWLLRWQDKMPTARVVAQRELQRPNKKEWVDTLVKEVEACQRPVVLVAHSLGCILVAHAAHALKDKVRGAYLVAPSDWDRDGLVSEFDGGDFKPVPTHPLTFPGHLVASRNDPYCDYERAQDFANAWGTTFQDAGEAGHINLESGHGPWPEGMMSFAHFMKKLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYP0</accession>
    <name>A0A0M6ZYP0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Phosphoribosylformylglycinamidine synthase subunit PurL</fullName>
            <shortName evidence="5">FGAM synthase</shortName>
            <ecNumber evidence="5">6.3.5.3</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Formylglycinamide ribonucleotide amidotransferase subunit II</fullName>
            <shortName evidence="5">FGAR amidotransferase II</shortName>
            <shortName evidence="5">FGAR-AT II</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="5">Glutamine amidotransferase PurL</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="5">Phosphoribosylformylglycinamidine synthase subunit II</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5 9" type="primary">purL</name>
        <name evidence="9" type="ORF">LAX5112_01574</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>ATP + H2O + L-glutamine + N(2)-formyl-N(1)-(5-phospho-beta-D-ribosyl)glycinamide = 2-formamido-N(1)-(5-O-phospho-beta-D-ribosyl)acetamidine + ADP + H(+) + L-glutamate + phosphate</text>
            <dbReference type="Rhea" id="RHEA:17129"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="ChEBI" id="CHEBI:147286"/>
            <dbReference type="ChEBI" id="CHEBI:147287"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.5.3"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="5">Purine metabolism; IMP biosynthesis via de novo pathway; 5-amino-1-(5-phospho-D-ribosyl)imidazole from N(2)-formyl-N(1)-(5-phospho-D-ribosyl)glycinamide: step 1/2.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Monomer. Part of the FGAM synthase complex composed of 1 PurL, 1 PurQ and 2 PurS subunits.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the FGAMS family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="6.3.5.3" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67928.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671362.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01574"/>
    <dbReference type="EnsemblBacteria" id="CTQ67928">
        <property type="protein sequence ID" value="CTQ67928"/>
        <property type="gene ID" value="LAX5112_01574"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00074">
        <property type="reaction ID" value="UER00128"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004642">
        <property type="term" value="F:phosphoribosylformylglycinamidine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006189">
        <property type="term" value="P:'de novo' IMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.650.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00420">
        <property type="entry name" value="PurL_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010074">
        <property type="entry name" value="PRibForGlyAmidine_synth_PurL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041609">
        <property type="entry name" value="PurL_linker"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010918">
        <property type="entry name" value="PurM-like_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036676">
        <property type="entry name" value="PurM-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016188">
        <property type="entry name" value="PurM-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036921">
        <property type="entry name" value="PurM-like_N_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43555">
        <property type="entry name" value="PTHR43555"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00586">
        <property type="entry name" value="AIRS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02769">
        <property type="entry name" value="AIRS_C"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18072">
        <property type="entry name" value="FGAR-AT_linker"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001587">
        <property type="entry name" value="FGAM_synthase_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55326">
        <property type="entry name" value="SSF55326"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56042">
        <property type="entry name" value="SSF56042"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01736">
        <property type="entry name" value="FGAM_synth_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 9" id="KW-0436">Ligase</keyword>
    <keyword evidence="4 5" id="KW-0460">Magnesium</keyword>
    <keyword evidence="2 5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3 5" id="KW-0658">Purine biosynthesis</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FGAR-AT_linker" evidence="8">
        <location>
            <begin position="16"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="domain" description="AIRS" evidence="6">
        <location>
            <begin position="87"/>
            <end position="188"/>
        </location>
    </feature>
    <feature type="domain" description="AIRS_C" evidence="7">
        <location>
            <begin position="206"/>
            <end position="351"/>
        </location>
    </feature>
    <feature type="domain" description="AIRS" evidence="6">
        <location>
            <begin position="438"/>
            <end position="554"/>
        </location>
    </feature>
    <feature type="domain" description="AIRS_C" evidence="7">
        <location>
            <begin position="569"/>
            <end position="702"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="5">
        <location>
            <begin position="94"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="5">
        <location>
            <begin position="312"/>
            <end position="314"/>
        </location>
    </feature>
    <feature type="active site" evidence="5">
        <location>
            <position position="49"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="5">
        <location>
            <position position="95"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="52"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="91"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="93"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="116"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="117"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="240"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="268"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="493"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="530"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="531"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="533"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00420"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00586"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF02769"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF18072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ67928.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="732" mass="77734" checksum="22494F3655715D59" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYY5</accession>
    <name>A0A0M6ZYY5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">3-oxoacyl-[acyl-carrier-protein] reductase FabG</fullName>
            <ecNumber evidence="1">1.1.1.100</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">fabG_4</name>
        <name evidence="1" type="ORF">LAX5112_01421</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.1.1.100" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67537.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67537">
        <property type="protein sequence ID" value="CTQ67537"/>
        <property type="gene ID" value="LAX5112_01421"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004316">
        <property type="term" value="F:3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67537.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="247" mass="25787" checksum="9FAD89F5A1DD0649" modified="2015-12-09" version="1">MSSNPFSLKDQTVVVVGASSGIGAATARLASELGANLILVSRSLNKLEAVRLALPLPDKARSIAVDYLNRDDLGKAFAEVEAVHHVVIPAVADENKKRGAFATLGEDTMQASFDKFWGQTFVVQTLASRMVPGGSVTLFASVAGLKPSGADSGLSVMNGVQAAVMQTGRSLAIELAPVRVNVLAPGVVLTNVWTAEQRDELKTWMESTLPARIAGTADHIAQAAVSLMTNPYISGAVLPVDGGLHLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYZ0</accession>
    <name>A0A0M6ZYZ0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Flagellar biosynthetic protein FlhB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">flhB_2</name>
        <name evidence="2" type="ORF">LAX5112_01296</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the type III secretion exporter family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67260.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671124.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01296"/>
    <dbReference type="EnsemblBacteria" id="CTQ67260">
        <property type="protein sequence ID" value="CTQ67260"/>
        <property type="gene ID" value="LAX5112_01296"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009306">
        <property type="term" value="P:protein secretion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1690.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006135">
        <property type="entry name" value="T3SS_substrate_exporter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029025">
        <property type="entry name" value="T3SS_substrate_exporter_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30531">
        <property type="entry name" value="PTHR30531"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01312">
        <property type="entry name" value="Bac_export_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF160544">
        <property type="entry name" value="SSF160544"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0966">Cell projection</keyword>
    <keyword evidence="2" id="KW-0969">Cilium</keyword>
    <keyword evidence="2" id="KW-0282">Flagellum</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010690"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67260.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="97" mass="10377" checksum="F59136F00A5D9887" modified="2015-12-09" version="1">MTTPTKPEKIAVALEYEDGGAPVVSAKGTGSAAQRIEDIAREAGVPIEQNPMMAEALSQIEVDHEIPMELYQAVAVLIGFIMRTGQAQHPKASESEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZ96</accession>
    <name>A0A0M6ZZ96_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Xaa-Pro aminopeptidase</fullName>
            <ecNumber evidence="3">3.4.11.9</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">pepP</name>
        <name evidence="3" type="ORF">LAX5112_01426</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.4.11.9" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67546.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671256.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01426"/>
    <dbReference type="EnsemblBacteria" id="CTQ67546">
        <property type="protein sequence ID" value="CTQ67546"/>
        <property type="gene ID" value="LAX5112_01426"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004177">
        <property type="term" value="F:aminopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.350.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029149">
        <property type="entry name" value="Creatin/AminoP/Spt16_NTD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036005">
        <property type="entry name" value="Creatinase/aminopeptidase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000587">
        <property type="entry name" value="Creatinase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000994">
        <property type="entry name" value="Pept_M24"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01321">
        <property type="entry name" value="Creatinase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00557">
        <property type="entry name" value="Peptidase_M24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53092">
        <property type="entry name" value="SSF53092"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55920">
        <property type="entry name" value="SSF55920"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0031">Aminopeptidase</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0645">Protease</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Creatinase_N" evidence="2">
        <location>
            <begin position="37"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_M24" evidence="1">
        <location>
            <begin position="193"/>
            <end position="401"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00557"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01321"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ67546.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="418" mass="46175" checksum="0335942E7D2EBF90" modified="2015-12-09" version="1">MANFDWHAERSDLDRIALLDRAPEGEGIDLKAVRLYRLGRVREQMAHFGVDAVILSDPINIRYATGARNMQVFCQRNAPSRYLVLTAAQSILFEFTGCLHLGQGLETIDDVRPAKTASFVAAGPGIQAREKAWAAEMADLIEELAGKGATVGLERLNAGTTIALRDCGLRIVDAQQPVEMARSVKSSEEMKCVNASLRATETGVAKLRDAICPGMTENELWSVLHQSVIAQNADYCETRLLNAGARTNPWFQETSGNVIGENELIALDTDVVGCHGYYSDFSRTFHAGPGKPTEAQRELYKVAYEQVQSNMDILHAGMSFRDYAERAWDIPDKFYENRYYLSAHGCGMTGEYPYLYHKGDFPDAGYDGEIAAGMTICVESYIGAAGGCEGVKLEQQVLVTEIGIELLSRFPFEEELLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZS1</accession>
    <name>A0A0M6ZZS1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">DNA repair protein RadC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">LAX5112_01475</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="6">Belongs to the UPF0758 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67672.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008194292.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01475"/>
    <dbReference type="EnsemblBacteria" id="CTQ67672">
        <property type="protein sequence ID" value="CTQ67672"/>
        <property type="gene ID" value="LAX5112_01475"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008237">
        <property type="term" value="F:metallopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd08071">
        <property type="entry name" value="MPN_DUF2466"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037518">
        <property type="entry name" value="MPN"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025657">
        <property type="entry name" value="RadC_JAB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010994">
        <property type="entry name" value="RuvA_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001405">
        <property type="entry name" value="UPF0758"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020891">
        <property type="entry name" value="UPF0758_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30471">
        <property type="entry name" value="PTHR30471"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04002">
        <property type="entry name" value="RadC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47781">
        <property type="entry name" value="SSF47781"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00608">
        <property type="entry name" value="radc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50249">
        <property type="entry name" value="MPN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01302">
        <property type="entry name" value="UPF0758"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-0482">Metalloprotease</keyword>
    <keyword evidence="1" id="KW-0645">Protease</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="MPN" evidence="8">
        <location>
            <begin position="115"/>
            <end position="237"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003797"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50249"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ67672.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="237" mass="26634" checksum="448DAF7C287415C6" modified="2015-12-09" version="1">MSEPDAGFSEKPSADTGTKGHRQRLRERFRKTGENSLADYELLEFLLFSALPRQDTKPIAKALLKRFGSFSAALSAPRPRLKEIKGLSDNSIDTLHAIHAAIARFHTAELRERELLDSWSKVMDYLQARMAMSEVEQFRVLFLDKKNGLIADELQQTGTVDHTPVYPREVVRRALEHGATAIILVHNHPSGDPTPSRADIQMTRQLVDIAKPLGIEIHDHIIVGLRSQVSFKGLQLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZV7</accession>
    <name>A0A0M6ZZV7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01554</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67877.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671454.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01554"/>
    <dbReference type="EnsemblBacteria" id="CTQ67877">
        <property type="protein sequence ID" value="CTQ67877"/>
        <property type="gene ID" value="LAX5112_01554"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="21"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="77"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="109"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="163"/>
            <end position="180"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67877.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="193" mass="21857" checksum="7CB39F0E90D8646A" modified="2015-12-09" version="1">MTEMEWSEREKRLTRIRRVSAFMKWMVSGILVLILIFGLIVIVGISLPSELMIAPDETIDFADIERPLGEIPQIQRFGLSIVSGIAFLLLMLAGWNIRQVFKRFQSMEFFSPQTLASVISFGVWLIAFATFDLISDPVGSVLLTYDFPPGERSIDVTLDGGELFFFVLGALMLLFGWILREAALIADENRQFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZY8</accession>
    <name>A0A0M6ZZY8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Phage tail tape measure protein, TP901 family, core region</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01218</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67114.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671057.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01218"/>
    <dbReference type="EnsemblBacteria" id="CTQ67114">
        <property type="protein sequence ID" value="CTQ67114"/>
        <property type="gene ID" value="LAX5112_01218"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010090">
        <property type="entry name" value="Phage_tape_meas"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10145">
        <property type="entry name" value="PhageMin_Tail"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01760">
        <property type="entry name" value="tape_meas_TP901"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PhageMin_Tail" evidence="2">
        <location>
            <begin position="99"/>
            <end position="280"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="410"/>
            <end position="455"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="585"/>
            <end position="615"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="411"/>
            <end position="425"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="600"/>
            <end position="615"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF10145"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ67114.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="615" mass="64721" checksum="633FED95CBC0F94F" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A092</accession>
    <name>A0A0M7A092_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Trk system potassium uptake protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">trkH</name>
        <name evidence="12" type="ORF">LAX5112_01470</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cell inner membrane</location>
            <topology evidence="9">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the TrkH potassium transport family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67660.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01470"/>
    <dbReference type="EnsemblBacteria" id="CTQ67660">
        <property type="protein sequence ID" value="CTQ67660"/>
        <property type="gene ID" value="LAX5112_01470"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015379">
        <property type="term" value="F:potassium:chloride symporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003445">
        <property type="entry name" value="Cat_transpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004772">
        <property type="entry name" value="TrkH"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02386">
        <property type="entry name" value="TrkH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006247">
        <property type="entry name" value="TrkH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="3 9" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7 9" id="KW-0406">Ion transport</keyword>
    <keyword evidence="8 9 11" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9 10" id="KW-0630">Potassium</keyword>
    <keyword evidence="4 9" id="KW-0633">Potassium transport</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 11" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 11" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2 9" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="24"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="57"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="89"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="149"/>
            <end position="169"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="195"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="253"/>
            <end position="274"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="286"/>
            <end position="305"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="317"/>
            <end position="336"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="343"/>
            <end position="362"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="407"/>
            <end position="430"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="471"/>
            <end position="491"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="127"/>
        </location>
        <ligand>
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="128"/>
        </location>
        <ligand>
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="235"/>
        </location>
        <ligand>
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="331"/>
        </location>
        <ligand>
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="447"/>
        </location>
        <ligand>
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="448"/>
        </location>
        <ligand>
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022538"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRNR" id="PIRNR006247"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR006247-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ67660.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="498" mass="53673" checksum="51688D3B8B71A61E" modified="2015-12-09" version="1">MCVSAERARYGHWGAFRLISLRPVLNVLGFLYVGLATAMLVPAIIDVAQKNADWQAFVFSALLTGMFGMLLSLSMGGSLKEGLDTRQTFILTTLAWATLPAFGALPFLWLGIGYADAVFEAVSGFTTTGSTVLTGLDGLPPGLLVWRSIMQWMGGVGIIVMAIVLLPFLRIGGMQLFQSESSDRSEKIVSRSVELIRLLGLAYLFLTVLCIAAYLATGMGLFDAFNHALTTIATGGYSTHDLSFGYFQNHSSAWVAIVFMIIGAMPFVLIIQALRGQPLLLWRDPQVRVLLGFLAIVSLALTVHLGVKMDFDFDEALVKATFTVVSIVTGTGYALGDFEQWGAPVVGTCFLLMFVGGCTGSTTGGIKIFRFLVFFGTVRAHLRRMVRPHRIMSEEYAGTRLTPELSFSVLAFLVVYLGSVGVITVALSFFDLDLVTAISAAATSVGNVGPGLGPMIGPAGHFAPLPDGAKWLLSFAMLVGRLELFTVLVLLDPDFWSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0H6</accession>
    <name>A0A0M7A0H6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Hopanoid biosynthesis associated radical SAM protein HpnJ</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01624</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68071.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671397.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01624"/>
    <dbReference type="EnsemblBacteria" id="CTQ68071">
        <property type="protein sequence ID" value="CTQ68071"/>
        <property type="gene ID" value="LAX5112_01624"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.30.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006638">
        <property type="entry name" value="Elp3/MiaB/NifB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007197">
        <property type="entry name" value="rSAM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023404">
        <property type="entry name" value="rSAM_horseshoe"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00029">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00729">
        <property type="entry name" value="Elp3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Elp3" evidence="2">
        <location>
            <begin position="163"/>
            <end position="393"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="502"/>
            <end position="523"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ68071.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="523" mass="58353" checksum="6355BD6E2859B516" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0K0</accession>
    <name>A0A0M7A0K0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Zinc-type alcohol dehydrogenase-like protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01790</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68568.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671515.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01790"/>
    <dbReference type="EnsemblBacteria" id="CTQ68568">
        <property type="protein sequence ID" value="CTQ68568"/>
        <property type="gene ID" value="LAX5112_01790"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013154">
        <property type="entry name" value="ADH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011032">
        <property type="entry name" value="GroES-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020843">
        <property type="entry name" value="PKS_ER"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002364">
        <property type="entry name" value="Quin_OxRdtase/zeta-crystal_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08240">
        <property type="entry name" value="ADH_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00829">
        <property type="entry name" value="PKS_ER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50129">
        <property type="entry name" value="SSF50129"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01162">
        <property type="entry name" value="QOR_ZETA_CRYSTAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PKS_ER" evidence="1">
        <location>
            <begin position="10"/>
            <end position="326"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68568.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="328" mass="34066" checksum="528502C0A77D60F3" modified="2015-12-09" version="1">MKAMVLRTYGEAAEFDAVQLPEPEVKSGQVLVRIGATSVNTVDTMIKQMGTDLPLSPELPALLGMDFAGTVEAVGEGVDRFARGDEVYGCAGGLADLPGALAELMAVDARLIAKKPQSLTMREAAALPLVGITAFEGLTRAGVKAGQKVLVHGGAGGVGHVAVQLAKHFGAEVYATGSKDQQLSVINGYGATAINYTSEPVADYVARCTDGQGFDVVFDSVGGANMANSFEAAALNANVASTVALVELDLSVAHFKGLSLHVVFMLIPMLHDFKRSEHGVILTKLAEIVDAGELKPLLDATSFGHTEVGAAYDRLTSGQAIGKVVVEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1A0</accession>
    <name>A0A0M7A1A0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">L-fuculose phosphate aldolase</fullName>
            <ecNumber evidence="2">4.1.2.17</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">fucA_1</name>
        <name evidence="2" type="ORF">LAX5112_01901</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="4.1.2.17" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68828.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671595.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01901"/>
    <dbReference type="EnsemblBacteria" id="CTQ68828">
        <property type="protein sequence ID" value="CTQ68828"/>
        <property type="gene ID" value="LAX5112_01901"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008738">
        <property type="term" value="F:L-fuculose-phosphate aldolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.225.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001303">
        <property type="entry name" value="Aldolase_II/adducin_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036409">
        <property type="entry name" value="Aldolase_II/adducin_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00596">
        <property type="entry name" value="Aldolase_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01007">
        <property type="entry name" value="Aldolase_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53639">
        <property type="entry name" value="SSF53639"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aldolase_II" evidence="1">
        <location>
            <begin position="18"/>
            <end position="192"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM01007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68828.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="240" mass="25587" checksum="BBAFED8CB6368DE8" modified="2015-12-09" version="1">MTAQTQPVFPKDTKALRAEVIETARALPKLGLTKGTSGNVSARTENGFLITPSGTPYEDLTDEKIVAVDMQGCYRGDILPSSEWRMHLDFYLAKSGCGAVVHCHSPRATALACHRKGIPAFHYMVALAGGDRIECSRYESFGTRALSKAMIDALGDRNACLLANHGQIAGGATLKKALSVAEGVEDLADQYLSALAIGQPVILDAAEMADILTKFKTYGKQAGDLKDGQSAAFELPKRVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A238</accession>
    <name>A0A0M7A238_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Magnesium transporter MgtE</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">mgtE</name>
        <name evidence="9" type="ORF">LAX5112_01764</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Acts as a magnesium transporter.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cell membrane</location>
            <topology evidence="7">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the SLC41A transporter family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68506.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671493.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01764"/>
    <dbReference type="EnsemblBacteria" id="CTQ68506">
        <property type="protein sequence ID" value="CTQ68506"/>
        <property type="gene ID" value="LAX5112_01764"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015095">
        <property type="term" value="F:magnesium ion transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.357.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.60.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.580.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000644">
        <property type="entry name" value="CBS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046342">
        <property type="entry name" value="CBS_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006668">
        <property type="entry name" value="Mg_transptr_MgtE_intracell_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038076">
        <property type="entry name" value="MgtE_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006669">
        <property type="entry name" value="MgtE_transporter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006667">
        <property type="entry name" value="SLC41_membr_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036739">
        <property type="entry name" value="SLC41_membr_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43773">
        <property type="entry name" value="PTHR43773"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00571">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01769">
        <property type="entry name" value="MgtE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03448">
        <property type="entry name" value="MgtE_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00116">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00924">
        <property type="entry name" value="MgtE_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161093">
        <property type="entry name" value="SSF161093"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54631">
        <property type="entry name" value="SSF54631"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00400">
        <property type="entry name" value="mgtE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51371">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0129">CBS domain</keyword>
    <keyword evidence="7" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7" id="KW-0460">Magnesium</keyword>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="7" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="305"/>
            <end position="325"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="379"/>
            <end position="406"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="412"/>
            <end position="438"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="450"/>
            <end position="474"/>
        </location>
    </feature>
    <feature type="domain" description="CBS" evidence="8">
        <location>
            <begin position="159"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="domain" description="CBS" evidence="8">
        <location>
            <begin position="223"/>
            <end position="281"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009749"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00703"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU362011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51371"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ68506.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="475" mass="51038" checksum="33F46971503211E5" modified="2015-12-09" version="1">MSKAETMASALPEIVWTREPAQEHLEGNDAALASVRDMIKAGKRQDLLDLLKLWDPTDVMQMLTRLRLKHARKLFKWLPANPSIKVVAELSPEFRSILMEESTLDQFRDILAGLDPEDAIEILNEFPEDAADELIARLPDVEDIATRASYADDTAGRVMARKFVALPEACTAGEAVEQMRAEADRIRKVFTVYVTDADGRLTGTVEVGKLLLAPADAPLSSIMNRDVISVSADMDQEEVLRLARKRDMRTVPVVGADGHLVGRITPKQLTRIASDEANEDMLLMSGVSAESRPDDTVFRIVRGRLPWLLAGLIGASVAATVVGSYEDQLAEAAILAAFIPVTMSMAGNAGLQASAVAVQGIATGALWSGDIVFRLLKEFLAALLNGTVAGIILGTLVMLASFVVPLEAPLDLALATSLSLLCVTTIAAMVGATIPIILDKIGIDPAMAIGVFITSSNDVLGVLIFFLMATTFYLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2M3</accession>
    <name>A0A0M7A2M3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Cytochrome d ubiquinol oxidase subunit 2</fullName>
            <ecNumber evidence="8">1.10.3.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">cydB_1</name>
        <name evidence="8" type="ORF">LAX5112_01912</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the cytochrome ubiquinol oxidase subunit 2 family.</text>
    </comment>
    <dbReference type="EC" id="1.10.3.-" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68857.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671605.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01912"/>
    <dbReference type="EnsemblBacteria" id="CTQ68857">
        <property type="protein sequence ID" value="CTQ68857"/>
        <property type="gene ID" value="LAX5112_01912"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003317">
        <property type="entry name" value="Cyt-d_oxidase_su2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43141">
        <property type="entry name" value="PTHR43141"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02322">
        <property type="entry name" value="Cyt_bd_oxida_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000267">
        <property type="entry name" value="Cyt_oxidse_sub2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00203">
        <property type="entry name" value="cydB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="15"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="53"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="83"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="126"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="170"/>
            <end position="195"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="207"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="270"/>
            <end position="291"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="303"/>
            <end position="323"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="343"/>
            <end position="365"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007543"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ68857.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="385" mass="42546" checksum="02D0E947DD495F5A" modified="2015-12-09" version="1">MVLYELIDYSTLKVIWWLLLGILLIGFAVTDGFDMGVGTLLPFIAETDIERRVVINTIGATWEGNQVWFILGGGAIFAAWPPLYAISFSGFYLAMFVVLAAMILRPVAFKYRSKRPDPNWRSAWDWALFTGSFVPALVFGVAVGNVLLGVPFRLDNELRMTYDGSFFGLFSPFTLLCGLLSVTMLVMHGAVWLVMRATGEIAARARKAGTFAALGGILLFGVGGYLVVSGYVEGFRITSEVDPNMQANPLAKQAVVEGGAWMQNYADYPVLWLAPIMGFLGMLGTLVLLQTRFEMPIFAFSKMAVFGIIATVGVSMFPFILPSSVQPEASLTVWDASSTHRTLFNMLVAVVIFLPIILVYTAWVYKVLWGKIDEETIERDNHTAY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A327</accession>
    <name>A0A0M7A327_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">NUDIX domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">LAX5112_01858</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68710.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040450692.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01858"/>
    <dbReference type="EnsemblBacteria" id="CTQ68710">
        <property type="protein sequence ID" value="CTQ68710"/>
        <property type="gene ID" value="LAX5112_01858"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015797">
        <property type="entry name" value="NUDIX_hydrolase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000086">
        <property type="entry name" value="NUDIX_hydrolase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039121">
        <property type="entry name" value="NUDT19"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12318">
        <property type="entry name" value="PTHR12318"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00293">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55811">
        <property type="entry name" value="SSF55811"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51462">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-0460">Magnesium</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nudix hydrolase" evidence="7">
        <location>
            <begin position="22"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51462"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ68710.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="248" mass="28049" checksum="6F142CDB3FDEC63C" modified="2015-12-09" version="1">MSDSFKEKLDKDEQAGNHPYIRPKDAATLLILDRSGSGDVKLLMGRRHMRHTFMPGKFVFPGGRVDPSDSRISNVLPYHPQVEARLSEGLKNSKTAARVRAFALAAIRETYEEAGIFIGRKADTDQLRLGTGFEAFAERHVQPDLGGMRMIARAITPPQRPRRFDTRFLAIWADAIADKLPGGHGPSGELEDCAWLTFDEARQKELPLITTKILEDLETRLRQDPDLSPETPVPYYFFKKGRFEKEIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A371</accession>
    <name>A0A0M7A371_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Tellurite resistance protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">LAX5112_02142</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69515.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02142"/>
    <dbReference type="EnsemblBacteria" id="CTQ69515">
        <property type="protein sequence ID" value="CTQ69515"/>
        <property type="gene ID" value="LAX5112_02142"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3680.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007791">
        <property type="entry name" value="DjlA_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028932">
        <property type="entry name" value="TerB-C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029024">
        <property type="entry name" value="TerB-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025266">
        <property type="entry name" value="TerB_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05099">
        <property type="entry name" value="TerB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF15615">
        <property type="entry name" value="TerB_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13208">
        <property type="entry name" value="TerB_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF158682">
        <property type="entry name" value="SSF158682"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="7"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="domain" description="TerB_N" evidence="4">
        <location>
            <begin position="152"/>
            <end position="353"/>
        </location>
    </feature>
    <feature type="domain" description="TerB" evidence="3">
        <location>
            <begin position="565"/>
            <end position="670"/>
        </location>
    </feature>
    <feature type="domain" description="TerB_C" evidence="5">
        <location>
            <begin position="710"/>
            <end position="823"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="78"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="78"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="119"/>
            <end position="148"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF05099"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF13208"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF15615"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ69515.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="836" mass="94693" checksum="2ED842E9768070F8" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5C4</accession>
    <name>A0A0M7A5C4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Fructokinase</fullName>
            <ecNumber evidence="1">2.7.1.4</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">mak</name>
        <name evidence="1" type="ORF">LAX5112_01900</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.7.1.4" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68824.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671594.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01900"/>
    <dbReference type="EnsemblBacteria" id="CTQ68824">
        <property type="protein sequence ID" value="CTQ68824"/>
        <property type="gene ID" value="LAX5112_01900"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008865">
        <property type="term" value="F:fructokinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000600">
        <property type="entry name" value="ROK"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18964">
        <property type="entry name" value="PTHR18964"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00480">
        <property type="entry name" value="ROK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="SSF53067"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0418">Kinase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ68824.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="298" mass="31481" checksum="EE5BEE486EFF7F0C" modified="2015-12-09" version="1">MRLGIDWGGTKIEIIALDDAGTELFRQRSATPKDDYEGCIRVVKDLVNAAESATGQTGSLGLGIPGSLSPKTGVVKNANSTWMNGKPLDKDLEAALNRPVRIQNDANCLAVSEATDGAGAGAHIVHAIIIGTGSGSGIAIDAKAHLGANGIGGEWGGIALPWMTAEEFPGPDSWIGHKGVIDLWCSGTGFQWDYKETTGQALKGHEIIDLKRSGDAVATKVYQDYVSRLARALAMSANLLDPDVFVLGGGMSNIAELYDDLPDAMLPYVFSDTYDTPIRKAKHGDSSGVRGAAWLWND</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5V1</accession>
    <name>A0A0M7A5V1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02309</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ69981.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ69981">
        <property type="protein sequence ID" value="CTQ69981"/>
        <property type="gene ID" value="LAX5112_02309"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ69981.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="49" mass="5300" checksum="CC84FF19E42CE923" modified="2015-12-09" version="1">MAERSFSGRIRYIGTPLLTLGFPCVQLRVQRGRYSGAVSCLAVADQLAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5Z2</accession>
    <name>A0A0M7A5Z2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Probable queuosine precursor transporter</fullName>
            <shortName evidence="1">Q precursor transporter</shortName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yhhQ</name>
        <name evidence="2" type="ORF">LAX5112_02273</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Involved in the import of queuosine (Q) precursors, required for Q precursor salvage.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69836.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671889.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02273"/>
    <dbReference type="EnsemblBacteria" id="CTQ69836">
        <property type="protein sequence ID" value="CTQ69836"/>
        <property type="gene ID" value="LAX5112_02273"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990397">
        <property type="term" value="P:queuosine salvage"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02088">
        <property type="entry name" value="Q_prec_transport"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003744">
        <property type="entry name" value="YhhQ"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34300">
        <property type="entry name" value="PTHR34300"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02592">
        <property type="entry name" value="Vut_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00697">
        <property type="entry name" value="TIGR00697"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="1" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="46"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="76"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="100"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="143"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="187"/>
            <end position="210"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02088"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69836.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="228" mass="24736" checksum="27CADF22F4287D4E" modified="2015-12-09" version="1">MEKTRSFSVADLAIAVFAMAIVVVASNFLVQFPVEHTLAGVNLADLLTWGAFTYPIAFLVTDLTNRRFGPSAARKVVLTGFVIAIVVPMVFWTINEAFTTPRILVASGTAFLVAQLLDVTIFDRLRRLTWWKAPIASSLIGSMIDTLLFFGIAFAAAFAFIDVSFGMEDGSLAFPVPFLGIADAFQVPLWASLAVGDFMVKMLVAVALLAPYRFVLNMFQPQPNGSAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="31" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6N9</accession>
    <name>A0A0M7A6N9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 11">UDP-N-acetylmuramate--L-alanine ligase</fullName>
            <ecNumber evidence="4 11">6.3.2.8</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="11">UDP-N-acetylmuramoyl-L-alanine synthetase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11 15" type="primary">murC</name>
        <name evidence="15" type="ORF">LAX5112_02616</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11">Cell wall formation.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 11">
            <text>ATP + L-alanine + UDP-N-acetyl-alpha-D-muramate = ADP + H(+) + phosphate + UDP-N-acetyl-alpha-D-muramoyl-L-alanine</text>
            <dbReference type="Rhea" id="RHEA:23372"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57972"/>
            <dbReference type="ChEBI" id="CHEBI:70757"/>
            <dbReference type="ChEBI" id="CHEBI:83898"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.2.8"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3 11">Cell wall biogenesis; peptidoglycan biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 11">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="11">Belongs to the MurCDEF family.</text>
    </comment>
    <dbReference type="EC" id="6.3.2.8" evidence="4 11"/>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70805.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672197.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02616"/>
    <dbReference type="EnsemblBacteria" id="CTQ70805">
        <property type="protein sequence ID" value="CTQ70805"/>
        <property type="gene ID" value="LAX5112_02616"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00219"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008763">
        <property type="term" value="F:UDP-N-acetylmuramate-L-alanine ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007049">
        <property type="term" value="P:cell cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008360">
        <property type="term" value="P:regulation of cell shape"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1190.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.190.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00046">
        <property type="entry name" value="MurC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036565">
        <property type="entry name" value="Mur-like_cat_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004101">
        <property type="entry name" value="Mur_ligase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036615">
        <property type="entry name" value="Mur_ligase_C_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013221">
        <property type="entry name" value="Mur_ligase_cen"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000713">
        <property type="entry name" value="Mur_ligase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005758">
        <property type="entry name" value="UDP-N-AcMur_Ala_ligase_MurC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01225">
        <property type="entry name" value="Mur_ligase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02875">
        <property type="entry name" value="Mur_ligase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08245">
        <property type="entry name" value="Mur_ligase_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53244">
        <property type="entry name" value="SSF53244"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53623">
        <property type="entry name" value="SSF53623"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01082">
        <property type="entry name" value="murC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="9 11" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="6 11" id="KW-0132">Cell division</keyword>
    <keyword evidence="7 11" id="KW-0133">Cell shape</keyword>
    <keyword evidence="10 11" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="5 11" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="11 15" id="KW-0436">Ligase</keyword>
    <keyword evidence="11" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8 11" id="KW-0573">Peptidoglycan synthesis</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Mur_ligase" evidence="12">
        <location>
            <begin position="10"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="domain" description="Mur_ligase_M" evidence="14">
        <location>
            <begin position="112"/>
            <end position="298"/>
        </location>
    </feature>
    <feature type="domain" description="Mur_ligase_C" evidence="13">
        <location>
            <begin position="318"/>
            <end position="403"/>
        </location>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <begin position="114"/>
            <end position="120"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001677"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004752"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00046"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF01225"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF02875"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF08245"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="CTQ70805.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="471" mass="50581" checksum="A14C1FE801D692DE" modified="2015-12-09" version="1">MKMPQDIGPVHFVGIGGIGMSGIAEVLKTLGYQVQGSDMAENANVQRLRANGIPVTVGHAAENLGEAEVLVVSSAIKKDNPELVAAREKLIPVVRRAEMLAELMRFKQAIAVGGTHGKTTTTSMVAALLDAGHLDPTVINGGIINAYGTNARMGDGDWMVVEADESDGTFVKLPADVAIVTNIDPEHLDHYGDFSGVQKAFRQFIDNVPFYGFAVMCLDHPEVQTMIGNIEDRRIVTYGTNPQADVRFTDVSMDGGKSIFSVTIRDRRSGEETELSNLVLPMPGLHNVSNATAAIAVASQLGVSPQDIEKGISSFGGVKRRFTFTGEAGGVQVFDDYGHHPVEIKAVLHAARESTDGKVIAVMQPHRYTRLHSLFDDFSNCFNDADAVVITPVYEAGEQPIEGARHTDLVSGLKTRGHRQVQAINGPEELASVVKELAEPGDFVICLGAGNITQWAYALPEQLDALQKEGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A771</accession>
    <name>A0A0M7A771_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02656</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70928.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672227.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02656"/>
    <dbReference type="EnsemblBacteria" id="CTQ70928">
        <property type="protein sequence ID" value="CTQ70928"/>
        <property type="gene ID" value="LAX5112_02656"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014955">
        <property type="entry name" value="DUF1826"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08856">
        <property type="entry name" value="DUF1826"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ70928.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="206" mass="22211" checksum="87F92664CB29A1FE" modified="2015-12-09" version="1">MSLALETSAGSVAADAFMGRDADILTEIASPGVAAAIWQRTPEPGFQSWIDGLGKDQLPDFRTVVPVHLAEAAVITACETSGLKASPERDVLASDIGALAVMMARILDVDHVRVRLDVADEVMCPKFHIDRVPARLLCTYRGSGTEYVPLGFEADPKRIRRVKRGAAALFRGALWDTDETTGILHRSPEVTPEDGPRLLLVIDPVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A799</accession>
    <name>A0A0M7A799_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Leucine export protein LeuE</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">LAX5112_02467</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70322.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008192098.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70322">
        <property type="protein sequence ID" value="CTQ70322"/>
        <property type="gene ID" value="LAX5112_02467"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006865">
        <property type="term" value="P:amino acid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001123">
        <property type="entry name" value="LeuE-type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30086">
        <property type="entry name" value="PTHR30086"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01810">
        <property type="entry name" value="LysE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="6"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="41"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="75"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="113"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="147"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="189"/>
            <end position="208"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ70322.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="212" mass="22914" checksum="078B86DB37649343" modified="2015-12-09" version="1">MTFLEYAVIGFFIGIITTAPVGPVNIMAIQHAVRSGFRHGVFVGLGAVVADTLYATAAIFGVSAVTRFIEGQFDLIEIVGGALLIIFGLKIWNSHPHLNGGDDGKEHGFWGDATAAFFMAITNPGTILAFIAIFGSLGDWRPDHDNYFGSLMMVAGVTAGACSWWVFISATVTHFRSRIDDAWLDRANHIAGAILMIFGGLIYLKLAYDLIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7C4</accession>
    <name>A0A0M7A7C4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02469</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70326.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672139.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02469"/>
    <dbReference type="EnsemblBacteria" id="CTQ70326">
        <property type="protein sequence ID" value="CTQ70326"/>
        <property type="gene ID" value="LAX5112_02469"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012645">
        <property type="entry name" value="CHP02301"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09539">
        <property type="entry name" value="DUF2385"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02301">
        <property type="entry name" value="TIGR02301"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ70326.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="122" mass="13875" checksum="FBBD2D10418A24C1" modified="2015-12-09" version="1">MAAFLVVSAPLTASAQDTPGVSAPPYEPQLMRLSEIFGALHYLRPLCGEDDTPTWRDRMEEFLDAETRDENRRRRFIERFNQGYRGFSVAYQDCTDAARLAMAQYLGQGETIISDVTSRYGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7X1</accession>
    <name>A0A0M7A7X1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transposase/IS protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02757</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71255.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02757"/>
    <dbReference type="EnsemblBacteria" id="CTQ71255">
        <property type="protein sequence ID" value="CTQ71255"/>
        <property type="gene ID" value="LAX5112_02757"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002611">
        <property type="entry name" value="IstB_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01695">
        <property type="entry name" value="IstB_IS21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="IstB_IS21" evidence="1">
        <location>
            <begin position="3"/>
            <end position="114"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71255.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="119" mass="13448" checksum="92510A54D4A11E2F" modified="2015-12-09" version="1">MGFTTAAALVNEMMEARDERRLMRFQKQMAACKLLIIDELGFVPLSKTGAELLFELISQRYERGATLITSNLPFDEWTETLGSERLTGALLDRVTHHVNILEMNGDSYRLAQSRARKAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8Z1</accession>
    <name>A0A0M7A8Z1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Glutathione S-transferase GstB</fullName>
            <ecNumber evidence="3">2.5.1.18</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">gstB_3</name>
        <name evidence="3" type="ORF">LAX5112_02354</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.5.1.18" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70094.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671977.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02354"/>
    <dbReference type="EnsemblBacteria" id="CTQ70094">
        <property type="protein sequence ID" value="CTQ70094"/>
        <property type="gene ID" value="LAX5112_02354"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004364">
        <property type="term" value="F:glutathione transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006749">
        <property type="term" value="P:glutathione metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010987">
        <property type="entry name" value="Glutathione-S-Trfase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036282">
        <property type="entry name" value="Glutathione-S-Trfase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040079">
        <property type="entry name" value="Glutathione_S-Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004045">
        <property type="entry name" value="Glutathione_S-Trfase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02798">
        <property type="entry name" value="GST_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00019">
        <property type="entry name" value="Glutathione_Transferase_(cytos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47616">
        <property type="entry name" value="SSF47616"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50405">
        <property type="entry name" value="GST_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50404">
        <property type="entry name" value="GST_NTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="GST N-terminal" evidence="1">
        <location>
            <begin position="3"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="domain" description="GST C-terminal" evidence="2">
        <location>
            <begin position="89"/>
            <end position="209"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50404"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50405"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ70094.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="209" mass="23535" checksum="51422F09E1514FBA" modified="2015-12-09" version="1">MIGQIKVWGRINSSNVRKVLWCLEELGLDYEQIDAGGAFGVVDTPDYLSLNPNGRIPCLQDGDFTIFESNAICRYLAKTYGTAPFVSNDPNNWALADQWMDWTTFSFGMPFRNLFWNMVRTAPGDRDQAAITHGIAHCSAQFAVVDALLKDQPYLSGHACGVGDIPLGSLAYAWFNMDFERPDQPYLAAWYQRLTERPSYQKGVMSRLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9J1</accession>
    <name>A0A0M7A9J1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="15">Formamidopyrimidine-DNA glycosylase</fullName>
            <shortName evidence="15">Fapy-DNA glycosylase</shortName>
            <ecNumber evidence="15">3.2.2.23</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="15">DNA-(apurinic or apyrimidinic site) lyase MutM</fullName>
            <shortName evidence="15">AP lyase MutM</shortName>
            <ecNumber evidence="15">4.2.99.18</ecNumber>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="15 19" type="primary">mutM</name>
        <name evidence="15" type="synonym">fpg</name>
        <name evidence="19" type="ORF">LAX5112_02770</name>
    </gene>
    <organism evidence="19 20">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="20" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="20">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="15">Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="14 15">
            <text>2'-deoxyribonucleotide-(2'-deoxyribose 5'-phosphate)-2'-deoxyribonucleotide-DNA = a 3'-end 2'-deoxyribonucleotide-(2,3-dehydro-2,3-deoxyribose 5'-phosphate)-DNA + a 5'-end 5'-monophospho-2'-deoxyribonucleoside-DNA + H(+)</text>
            <dbReference type="Rhea" id="RHEA:66592"/>
            <dbReference type="Rhea" id="RHEA-COMP:13180"/>
            <dbReference type="Rhea" id="RHEA-COMP:16897"/>
            <dbReference type="Rhea" id="RHEA-COMP:17067"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:136412"/>
            <dbReference type="ChEBI" id="CHEBI:157695"/>
            <dbReference type="ChEBI" id="CHEBI:167181"/>
            <dbReference type="EC" id="4.2.99.18"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 15">
            <text>Hydrolysis of DNA containing ring-opened 7-methylguanine residues, releasing 2,6-diamino-4-hydroxy-5-(N-methyl)formamidopyrimidine.</text>
            <dbReference type="EC" id="3.2.2.23"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="15">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="15">Binds 1 zinc ion per subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3 15">Monomer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 15">Belongs to the FPG family.</text>
    </comment>
    <dbReference type="EC" id="3.2.2.23" evidence="15"/>
    <dbReference type="EC" id="4.2.99.18" evidence="15"/>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71291.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672324.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02770"/>
    <dbReference type="EnsemblBacteria" id="CTQ71291">
        <property type="protein sequence ID" value="CTQ71291"/>
        <property type="gene ID" value="LAX5112_02770"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140078">
        <property type="term" value="F:class I DNA-(apurinic or apyrimidinic site) endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003684">
        <property type="term" value="F:damaged DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008534">
        <property type="term" value="F:oxidized purine nucleobase lesion DNA N-glycosylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006284">
        <property type="term" value="P:base-excision repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.190.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00103">
        <property type="entry name" value="Fapy_DNA_glycosyl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015886">
        <property type="entry name" value="DNA_glyclase/AP_lyase_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020629">
        <property type="entry name" value="Formamido-pyr_DNA_Glyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012319">
        <property type="entry name" value="FPG_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035937">
        <property type="entry name" value="MutM-like_N-ter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010979">
        <property type="entry name" value="Ribosomal_S13-like_H2TH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000214">
        <property type="entry name" value="Znf_DNA_glyclase/AP_lyase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01149">
        <property type="entry name" value="Fapy_DNA_glyco"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06831">
        <property type="entry name" value="H2TH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00898">
        <property type="entry name" value="Fapy_DNA_glyco"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01232">
        <property type="entry name" value="H2TH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46946">
        <property type="entry name" value="SSF46946"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81624">
        <property type="entry name" value="SSF81624"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00577">
        <property type="entry name" value="fpg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51068">
        <property type="entry name" value="FPG_CAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51066">
        <property type="entry name" value="ZF_FPG_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 15" id="KW-0227">DNA damage</keyword>
    <keyword evidence="10 15" id="KW-0234">DNA repair</keyword>
    <keyword evidence="9 15" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="13 15 19" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="7 15 19" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="11 15" id="KW-0456">Lyase</keyword>
    <keyword evidence="4 15" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12 15" id="KW-0511">Multifunctional enzyme</keyword>
    <keyword evidence="20" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 15" id="KW-0862">Zinc</keyword>
    <keyword evidence="6 15 16" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="FPG_CAT" evidence="18">
        <location>
            <begin position="2"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="domain" description="FPG-type" evidence="17">
        <location>
            <begin position="261"/>
            <end position="297"/>
        </location>
    </feature>
    <feature type="active site" description="Schiff-base intermediate with DNA" evidence="15">
        <location>
            <position position="2"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="15">
        <location>
            <position position="3"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor; for beta-elimination activity" evidence="15">
        <location>
            <position position="58"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor; for delta-elimination activity" evidence="15">
        <location>
            <position position="287"/>
        </location>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="104"/>
        </location>
        <ligand>
            <name>DNA</name>
            <dbReference type="ChEBI" id="CHEBI:16991"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="127"/>
        </location>
        <ligand>
            <name>DNA</name>
            <dbReference type="ChEBI" id="CHEBI:16991"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="170"/>
        </location>
        <ligand>
            <name>DNA</name>
            <dbReference type="ChEBI" id="CHEBI:16991"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001668"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009409"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011245"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023268"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00024490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00103"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00391"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="PROSITE" id="PS51066"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="18">
        <source>
            <dbReference type="PROSITE" id="PS51068"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="EMBL" id="CTQ71291.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="297" mass="32906" checksum="631D3AC556FC36BB" modified="2015-12-09" version="1">MPELPEVETVKRGLAPTFEGALLTKVDQNRPDLRFPFPDDFVERLTGRTVTALSRRSKYLLADTDSGDVLIMHLGMSGSFRIENAIDKSTPGEFAHERNKDPKHDHVVFHLSLPNDGSARIIYNDPRRFGFMDLVPRTDLSAHPYFRELGLEPLGNALSGEVLARLFAGRKSPLKAALLNQKLIAGLGNIYVCEALWRSGLSPKRLASTLVTKSGKPTKKADLLAQNIRLTLEDAILAGGSSLRDHTQADGTLGYFQHSFAVYDREGAPCRTPNCTGTVRRVVQSNRSTFYCPICQR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9W0</accession>
    <name>A0A0M7A9W0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="16">LHC domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="17" type="ORF">LAX5112_02962</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="18" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="18">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Single-pass type II membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="3">Membrane</location>
            <topology evidence="3">Single-pass type II membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71888.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008192311.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02962"/>
    <dbReference type="EnsemblBacteria" id="CTQ71888">
        <property type="protein sequence ID" value="CTQ71888"/>
        <property type="gene ID" value="LAX5112_02962"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030077">
        <property type="term" value="C:plasma membrane light-harvesting complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042314">
        <property type="term" value="F:bacteriochlorophyll binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045156">
        <property type="term" value="F:electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019684">
        <property type="term" value="P:photosynthesis, light reaction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.220.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000066">
        <property type="entry name" value="Antenna_a/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018332">
        <property type="entry name" value="Antenna_alpha"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035889">
        <property type="entry name" value="Light-harvesting_complex"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00556">
        <property type="entry name" value="LHC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00673">
        <property type="entry name" value="LIGHTHARVSTA"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56918">
        <property type="entry name" value="SSF56918"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0042">Antenna complex</keyword>
    <keyword evidence="10" id="KW-0076">Bacteriochlorophyll</keyword>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5" id="KW-0148">Chlorophyll</keyword>
    <keyword evidence="12" id="KW-0157">Chromophore</keyword>
    <keyword evidence="14" id="KW-0437">Light-harvesting polypeptide</keyword>
    <keyword evidence="9" id="KW-0460">Magnesium</keyword>
    <keyword evidence="13 15" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 15" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="11 15" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="domain" description="LHC" evidence="16">
        <location>
            <begin position="1"/>
            <end position="41"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002455"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004249"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004606"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022494"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022549"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022956"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022991"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023243"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="Pfam" id="PF00556"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="CTQ71888.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="66" mass="7659" checksum="1E0BC31B3534428F" modified="2015-12-09" version="1">MWKMWLLFDPRRVLVLLTVFLFSLAVLIHFILLSTERYNWLEQQASLSDGNAHIEMLLPNGSSALV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AA45</accession>
    <name>A0A0M7AA45_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">17kDa_Anti_2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02529</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70494.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70494">
        <property type="protein sequence ID" value="CTQ70494"/>
        <property type="gene ID" value="LAX5112_02529"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032635">
        <property type="entry name" value="Anti_2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16998">
        <property type="entry name" value="17kDa_Anti_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="17kDa_Anti_2" evidence="1">
        <location>
            <begin position="52"/>
            <end position="158"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF16998"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70494.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="163" mass="17106" checksum="119A3635BE88B208" modified="2015-12-09" version="1">MRRMRSYTARPSKIHPLKNQSAVVCALVMGLTASGCSQVGMQVGTDDLKTPTILTGSIPSAADEAYTDLSVEDRQSIAKNFDTLDQDLASGAGLEDLKLPWLNGISGNSGTISEINPTAFAQTGCLGFKTTANTISGIKLYSGTACRDITQKFAITALTVADA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAN6</accession>
    <name>A0A0M7AAN6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Adenosylhomocysteinase</fullName>
            <ecNumber evidence="5">3.3.1.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ahcY_1</name>
        <name evidence="5" type="ORF">LAX5112_02855</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the adenosylhomocysteinase family.</text>
    </comment>
    <dbReference type="EC" id="3.3.1.1" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71532.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02855"/>
    <dbReference type="EnsemblBacteria" id="CTQ71532">
        <property type="protein sequence ID" value="CTQ71532"/>
        <property type="gene ID" value="LAX5112_02855"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004013">
        <property type="term" value="F:adenosylhomocysteinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006730">
        <property type="term" value="P:one-carbon metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1480">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042172">
        <property type="entry name" value="Adenosylhomocyst_ase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000043">
        <property type="entry name" value="Adenosylhomocysteinase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015878">
        <property type="entry name" value="Ado_hCys_hydrolase_NAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23420">
        <property type="entry name" value="PTHR23420"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00670">
        <property type="entry name" value="AdoHcyase_NAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00996">
        <property type="entry name" value="AdoHcyase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00997">
        <property type="entry name" value="AdoHcyase_NAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0554">One-carbon metabolism</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AdoHcyase_NAD" evidence="4">
        <location>
            <begin position="183"/>
            <end position="345"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001911"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007122"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022563"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00997"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ71532.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="397" mass="43842" checksum="62BD1F05328DAF1E" modified="2015-12-09" version="1">MTPLNNMALGASVDYVRRANYLPALVERLDLCQAETHRFMLVAHLFDDTMRMIDALAGIMDFDAIIGIPYSSGSDATRTKWQSRYGSIVHCPKTEDDFKETLAAAIQKSFLQCRSSGQKLVIQEVGGYVVELLHERFADQLDLVEGVVEITKQGVWRAEQLNLKVPVLHCADSELKRLEAKRCGETIVRCLDGLSRDLGNSLAGRHAAVFGAGWIGSGVAHAFRRLDVIPMVIDTDPLKVAEARLSGLQAHMSPRDLDKCDLIVGAAGRLSITEQVLRQLRNGCMVASASSRRIEIDVDYLETAPSADIHASIRAFHFQNDIGHGERQICLVNDGYPANFIPGSGSVADEIVELILGELIVLMSDITFYPYEPGIHRITPASEALCTQLWIEQRDQL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABC1</accession>
    <name>A0A0M7ABC1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Bacteriophytochrome cph2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">cph2_13</name>
        <name evidence="3" type="ORF">LAX5112_02658</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70934.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02658"/>
    <dbReference type="EnsemblBacteria" id="CTQ70934">
        <property type="protein sequence ID" value="CTQ70934"/>
        <property type="gene ID" value="LAX5112_02658"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd01948">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01949">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.450">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001633">
        <property type="entry name" value="EAL_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035919">
        <property type="entry name" value="EAL_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000160">
        <property type="entry name" value="GGDEF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00563">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00990">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00052">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00267">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141868">
        <property type="entry name" value="SSF141868"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00254">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50883">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50887">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GGDEF" evidence="2">
        <location>
            <begin position="440"/>
            <end position="571"/>
        </location>
    </feature>
    <feature type="domain" description="EAL" evidence="1">
        <location>
            <begin position="580"/>
            <end position="831"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ70934.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="844" mass="94000" checksum="DA1278514244FC2B" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACM1</accession>
    <name>A0A0M7ACM1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">ATP-binding protein Uup</fullName>
            <ecNumber evidence="5">3.6.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 9" type="primary">uup</name>
        <name evidence="9" type="ORF">LAX5112_03340</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Probably plays a role in ribosome assembly or function. May be involved in resolution of branched DNA intermediates that result from template switching in postreplication gaps. Binds DNA and has ATPase activity.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>ATP + H2O = ADP + H(+) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cytoplasm</location>
        </subcellularLocation>
        <text evidence="5">Associates with ribosomes.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the ABC transporter superfamily. ABCF family. Uup subfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.1.-" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72865.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672756.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03340"/>
    <dbReference type="EnsemblBacteria" id="CTQ72865">
        <property type="protein sequence ID" value="CTQ72865"/>
        <property type="gene ID" value="LAX5112_03340"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043022">
        <property type="term" value="F:ribosome binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.380">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00848">
        <property type="entry name" value="Uup"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032524">
        <property type="entry name" value="ABC_tran_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043686">
        <property type="entry name" value="Uup"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037118">
        <property type="entry name" value="Val-tRNA_synth_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16326">
        <property type="entry name" value="ABC_tran_CTD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="1 5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5" id="KW-0227">DNA damage</keyword>
    <keyword evidence="5" id="KW-0234">DNA repair</keyword>
    <keyword evidence="5" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3 5 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="ABC transporter" evidence="8">
        <location>
            <begin position="7"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="8">
        <location>
            <begin position="284"/>
            <end position="501"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="256"/>
            <end position="277"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="497"/>
            <end position="533"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="5">
        <location>
            <begin position="539"/>
            <end position="593"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="499"/>
            <end position="530"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5 6">
        <location>
            <begin position="39"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5 6">
        <location>
            <begin position="316"/>
            <end position="323"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00848"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ72865.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="603" mass="66960" checksum="666D4696D334B517" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACP4</accession>
    <name>A0A0M7ACP4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">LIV-I protein H</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">livH_10</name>
        <name evidence="7" type="ORF">LAX5112_03103</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72222.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008191716.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03103"/>
    <dbReference type="EnsemblBacteria" id="CTQ72222">
        <property type="protein sequence ID" value="CTQ72222"/>
        <property type="gene ID" value="LAX5112_03103"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001851">
        <property type="entry name" value="ABC_transp_permease"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02653">
        <property type="entry name" value="BPD_transp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="20"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="50"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="76"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="106"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="159"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="211"/>
            <end position="230"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="250"/>
            <end position="271"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="278"/>
            <end position="303"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ72222.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="317" mass="34155" checksum="BCC8EF65BD97663D" modified="2015-12-09" version="1">MLYDIFIDPFVQMYQMPDFFLQVLWEGFVAGILYALIALGFVLIFKASGVFNFAQGIMVVFAGLTLVGLHENGVPAYLALLLTIGVMGVLAYSVERVVMRPLVNQPDIILLMATIGLTYFLIGFGEFVFGGEPKQMITQELGLPTGSTAFEFGERGLVILQHIDIAAAVIAVIMVASLGLFFNKTRIGRALRAVADDHQAALSVGISLNQIWAIVWFAAGLVALATGIMWGARSDVSFALEIVAFKALPVLILGGFTSIPGAIVGGLIIGFGEKIGELYWGGLVGGGIESWLAYIIALIFLLFRPQGLFGEKIIERV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACT3</accession>
    <name>A0A0M7ACT3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">DNA polymerase III subunit gamma/tau</fullName>
            <ecNumber evidence="4">2.7.7.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">dnaX_2</name>
        <name evidence="4" type="synonym">dnaX</name>
        <name evidence="7" type="ORF">LAX5112_02828</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>a 2'-deoxyribonucleoside 5'-triphosphate + DNA(n) = diphosphate + DNA(n+1)</text>
            <dbReference type="Rhea" id="RHEA:22508"/>
            <dbReference type="Rhea" id="RHEA-COMP:17339"/>
            <dbReference type="Rhea" id="RHEA-COMP:17340"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:61560"/>
            <dbReference type="ChEBI" id="CHEBI:173112"/>
            <dbReference type="EC" id="2.7.7.7"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="4">DNA polymerase III contains a core (composed of alpha, epsilon and theta chains) that associates with a tau subunit. This core dimerizes to form the POLIII' complex. PolIII' associates with the gamma complex (composed of gamma, delta, delta', psi and chi chains) and with the beta chain to form the complete DNA polymerase III complex.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the DnaX/STICHEL family.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.7" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71454.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672360.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02828"/>
    <dbReference type="EnsemblBacteria" id="CTQ71454">
        <property type="protein sequence ID" value="CTQ71454"/>
        <property type="gene ID" value="LAX5112_02828"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009360">
        <property type="term" value="C:DNA polymerase III complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003887">
        <property type="term" value="F:DNA-directed DNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd18137">
        <property type="entry name" value="HLD_clamp_pol_III_gamma_tau"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008921">
        <property type="entry name" value="DNA_pol3_clamp-load_cplx_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022754">
        <property type="entry name" value="DNA_pol_III_gamma-3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022107">
        <property type="entry name" value="DNA_pol_III_gamma/tau_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012763">
        <property type="entry name" value="DNA_pol_III_sug/sutau_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045085">
        <property type="entry name" value="HLD_clamp_pol_III_gamma_tau"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12169">
        <property type="entry name" value="DNA_pol3_gamma3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12362">
        <property type="entry name" value="DUF3646"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48019">
        <property type="entry name" value="SSF48019"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02397">
        <property type="entry name" value="dnaX_nterm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0235">DNA replication</keyword>
    <keyword evidence="4" id="KW-0239">DNA-directed DNA polymerase</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4 7" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="AAA" evidence="6">
        <location>
            <begin position="71"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="418"/>
            <end position="500"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="621"/>
            <end position="649"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="457"/>
            <end position="500"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006360"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU364063"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ71454.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="649" mass="69851" checksum="2C99A36D2738DDF0" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AD23</accession>
    <name>A0A0M7AD23_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03214</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72531.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72531">
        <property type="protein sequence ID" value="CTQ72531"/>
        <property type="gene ID" value="LAX5112_03214"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="15"/>
            <end position="36"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72531.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="103" mass="11150" checksum="44E6CB09BEBB7BA4" modified="2015-12-09" version="1">MDPATERVQAKLKRLLLGSSLIMFAGFIAVFAAILYKINTYEADPSEAAIVETLNVGVDAEVLQATISEGIMLVLVREGTTTALLRFDPHDGKLLGRTVFVGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADF5</accession>
    <name>A0A0M7ADF5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03445</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73165.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03445"/>
    <dbReference type="EnsemblBacteria" id="CTQ73165">
        <property type="protein sequence ID" value="CTQ73165"/>
        <property type="gene ID" value="LAX5112_03445"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000618">
        <property type="entry name" value="Insect_cuticle"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032710">
        <property type="entry name" value="NTF2-like_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54427">
        <property type="entry name" value="SSF54427"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51155">
        <property type="entry name" value="CHIT_BIND_RR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ73165.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="54" mass="6050" checksum="54A05EA701572866" modified="2015-12-09" version="1">MVINGESAMTMGNYYFMTTDGTEVKVEYTFGVERMEDGDLKIVLHHSSVPFSPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADK2</accession>
    <name>A0A0M7ADK2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Adhesin/invasin protein PagN</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">pagN</name>
        <name evidence="3" type="ORF">LAX5112_03202</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72496.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040452557.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03202"/>
    <dbReference type="EnsemblBacteria" id="CTQ72496">
        <property type="protein sequence ID" value="CTQ72496"/>
        <property type="gene ID" value="LAX5112_03202"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011250">
        <property type="entry name" value="OMP/PagP_b-brl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027385">
        <property type="entry name" value="OMP_b-brl"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13505">
        <property type="entry name" value="OMP_b-brl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56925">
        <property type="entry name" value="SSF56925"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809418" evidence="1">
        <location>
            <begin position="24"/>
            <end position="271"/>
        </location>
    </feature>
    <feature type="domain" description="OMP_b-brl" evidence="2">
        <location>
            <begin position="39"/>
            <end position="252"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13505"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ72496.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="271" mass="29181" checksum="22EF789A2D03CACF" modified="2015-12-09" version="1">MDRFFKRLSLTGFAVVLSTAGFAADLPTPVIEHVPVAPAAVGGFYLRGDIGYKVYGDPSGSFNDSAIGGLRYERESLDNTWMIGAGVGYQFNRYFRSDVTVDYEAKATATGYAPCGGCAAAGQFSTEKADIDVWTVMLNGYVDLATWNRITPYVGAGIGASYVSASNKTSLNPDGTFSSYDGSNGDWNFAWALMAGAEYAVTPNWSIDAGYRYKDLGEAKTVKLYNVGTGESREVWEDLTAHEFRIGARYTFNAPAAAPAYYPAGPITSNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AE23</accession>
    <name>A0A0M7AE23_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Putative aliphatic sulfonates transport permease protein SsuC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ssuC_6</name>
        <name evidence="7" type="ORF">LAX5112_03341</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72867.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008196038.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03341"/>
    <dbReference type="EnsemblBacteria" id="CTQ72867">
        <property type="protein sequence ID" value="CTQ72867"/>
        <property type="gene ID" value="LAX5112_03341"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="60"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="95"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="123"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="175"/>
            <end position="198"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="218"/>
            <end position="240"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="57"/>
            <end position="241"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ72867.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="254" mass="27603" checksum="7C8F76DB384F34A0" modified="2015-12-09" version="1">MTSSRWITAAPWLWAIGLFVLWEGSVQVFDIPVIILPAPSDIWAATVKYWSPIWKNSVQTLYTTVVGFVMAVVGGMALGLAIGWSRSIYAGLYPIMIGFNSIPKVAVVPILVIWFGIGTIPAVITAFLIAFFPIVVNVATGLATIEPEMEDVLRALGAKKHDIMLKVGIPRAMPYLFGSMKVAITLAFVGSVISESIAANSGLGYMMQLAQSQFNVPLVWAGLVALAVLGIIMYALMAWLEMRMTGWAHRGNRN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEE0</accession>
    <name>A0A0M7AEE0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Pathogenicity locus</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_03395</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72987.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672799.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03395"/>
    <dbReference type="EnsemblBacteria" id="CTQ72987">
        <property type="protein sequence ID" value="CTQ72987"/>
        <property type="gene ID" value="LAX5112_03395"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025567">
        <property type="entry name" value="DUF4332"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14229">
        <property type="entry name" value="DUF4332"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF4332" evidence="3">
        <location>
            <begin position="9"/>
            <end position="129"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF14229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ72987.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="135" mass="14945" checksum="42822BD0D9E15E52" modified="2015-12-09" version="1">MSYSIDEIEGIGPTYAAKLGEIGIKTTEAYLERAKDPKGRKALEAETGIDGKRILKWANMADLMRISGVGEEYSELLEAAGVDTVKELKHRNAANLAAKMKEVNDEKSLVRQVPSETQVTKWVDQAKELAPMMTY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEE5</accession>
    <name>A0A0M7AEE5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Putative signal peptide peptidase SppA</fullName>
            <ecNumber evidence="4">3.4.21.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">sppA_2</name>
        <name evidence="4" type="ORF">LAX5112_03564</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase S49 family.</text>
    </comment>
    <dbReference type="EC" id="3.4.21.-" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73525.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008191492.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03564"/>
    <dbReference type="EnsemblBacteria" id="CTQ73525">
        <property type="protein sequence ID" value="CTQ73525"/>
        <property type="gene ID" value="LAX5112_03564"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008233">
        <property type="term" value="F:peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07023">
        <property type="entry name" value="S49_Sppa_N_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029045">
        <property type="entry name" value="ClpP/crotonase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004635">
        <property type="entry name" value="Pept_S49_SppA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002142">
        <property type="entry name" value="Peptidase_S49"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01343">
        <property type="entry name" value="Peptidase_S49"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52096">
        <property type="entry name" value="SSF52096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00706">
        <property type="entry name" value="SppA_dom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="20"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_S49" evidence="3">
        <location>
            <begin position="107"/>
            <end position="258"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008683"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01343"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ73525.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="328" mass="35638" checksum="A58363741701A771" modified="2015-12-09" version="1">MAMDVDALVDRRRLRRKVTFWRVATFLVAALVLIGGLVYFAGAANMSKRSAHIARIPIEGMILENRKTLEMLEKIGKSDAVKGVIVSINSPGGSTTGGEAIYNALRKLSEKKPIVAEMRTIGTSAGYLIAMSADHIVARYNTITGSIGVLFQFGNFEKLLETVGVSMEAVKSAPLKAEPDFYSPATPEAKAMLQAMVTDSYNWFVDILAERRDLDKSKALELADGRVLLGQRALQEKLVDAIGGEETAVSWLETEKGVAKDLPVITWTTTESIEELPFASRVSREIGKGFGLAVLEPLNEAKGLISRDLMLDGLVSVWQAPVAADKKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEI6</accession>
    <name>A0A0M7AEI6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03494</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73299.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672876.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ73299">
        <property type="protein sequence ID" value="CTQ73299"/>
        <property type="gene ID" value="LAX5112_03494"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ73299.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="121" mass="13044" checksum="31E2B2BAACDCC576" modified="2015-12-09" version="1">MTGSDTGPSGQAQEDLDLGAVSAADFQDHITAEFQIVSQHTTHPIELVSAEEKPEYHAGPGIQRTPFVLLFKVSGDFREIAGDGSEAIHKEGFGRLNRLHVTRVVPPTPASEGVFLEVCFT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AF41</accession>
    <name>A0A0M7AF41_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Stringent starvation protein A</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">sspA</name>
        <name evidence="3" type="ORF">LAX5112_03628</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73698.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672978.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03628"/>
    <dbReference type="EnsemblBacteria" id="CTQ73698">
        <property type="protein sequence ID" value="CTQ73698"/>
        <property type="gene ID" value="LAX5112_03628"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006749">
        <property type="term" value="P:glutathione metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010987">
        <property type="entry name" value="Glutathione-S-Trfase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036282">
        <property type="entry name" value="Glutathione-S-Trfase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040079">
        <property type="entry name" value="Glutathione_S-Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004045">
        <property type="entry name" value="Glutathione_S-Trfase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004046">
        <property type="entry name" value="GST_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14497">
        <property type="entry name" value="GST_C_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13417">
        <property type="entry name" value="GST_N_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00019">
        <property type="entry name" value="Glutathione_Transferase_(cytos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47616">
        <property type="entry name" value="SSF47616"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50405">
        <property type="entry name" value="GST_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50404">
        <property type="entry name" value="GST_NTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GST N-terminal" evidence="1">
        <location>
            <begin position="1"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="domain" description="GST C-terminal" evidence="2">
        <location>
            <begin position="88"/>
            <end position="222"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50404"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50405"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ73698.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="230" mass="26022" checksum="761C031E5FBD39A7" modified="2015-12-09" version="1">MLTLYHHPFSPSSRFIRLILSEYGAAFEERHINPWERPQELLILNAAGTIPVMVENEGPAICGPGPIMEYLDETRGYAIGDRRLMPDHPDARAETRRLVDWALAKFDVEVIGHLVRERIYKQIMPKSAGGGEPDSAALRVARANIDHHLKYFGYLVASRRWLAGDRLSFADFALAASLSCADYLGEVKWHTEEDIKNWYARVKSRPSMRPLLGEKVLGMPPASTYADLDF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="31" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AF66</accession>
    <name>A0A0M7AF66_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">3-phosphoshikimate 1-carboxyvinyltransferase</fullName>
            <ecNumber evidence="7">2.5.1.19</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">5-enolpyruvylshikimate-3-phosphate synthase</fullName>
            <shortName evidence="7">EPSP synthase</shortName>
            <shortName evidence="7">EPSPS</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7 9" type="primary">aroA</name>
        <name evidence="9" type="ORF">LAX5112_03569</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>3-phosphoshikimate + phosphoenolpyruvate = 5-O-(1-carboxyvinyl)-3-phosphoshikimate + phosphate</text>
            <dbReference type="Rhea" id="RHEA:21256"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57701"/>
            <dbReference type="ChEBI" id="CHEBI:58702"/>
            <dbReference type="ChEBI" id="CHEBI:145989"/>
            <dbReference type="EC" id="2.5.1.19"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 7">Metabolic intermediate biosynthesis; chorismate biosynthesis; chorismate from D-erythrose 4-phosphate and phosphoenolpyruvate: step 6/7.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Monomer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 7">Belongs to the EPSP synthase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.19" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73539.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672935.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03569"/>
    <dbReference type="EnsemblBacteria" id="CTQ73539">
        <property type="protein sequence ID" value="CTQ73539"/>
        <property type="gene ID" value="LAX5112_03569"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00053">
        <property type="reaction ID" value="UER00089"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003866">
        <property type="term" value="F:3-phosphoshikimate 1-carboxyvinyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009073">
        <property type="term" value="P:aromatic amino acid family biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008652">
        <property type="term" value="P:cellular amino acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009423">
        <property type="term" value="P:chorismate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd01556">
        <property type="entry name" value="EPSP_synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.65.10.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00210">
        <property type="entry name" value="EPSP_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001986">
        <property type="entry name" value="Enolpyruvate_Tfrase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036968">
        <property type="entry name" value="Enolpyruvate_Tfrase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006264">
        <property type="entry name" value="EPSP_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023193">
        <property type="entry name" value="EPSP_synthase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013792">
        <property type="entry name" value="RNA3'P_cycl/enolpyr_Trfase_a/b"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00275">
        <property type="entry name" value="EPSP_synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000505">
        <property type="entry name" value="EPSPS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55205">
        <property type="entry name" value="SSF55205"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01356">
        <property type="entry name" value="aroA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00104">
        <property type="entry name" value="EPSP_SYNTHASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00885">
        <property type="entry name" value="EPSP_SYNTHASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="6 7" id="KW-0057">Aromatic amino acid biosynthesis</keyword>
    <keyword evidence="7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 7 9" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="EPSP_synthase" evidence="8">
        <location>
            <begin position="14"/>
            <end position="433"/>
        </location>
    </feature>
    <feature type="region of interest" description="Shikimate-3-phosphate binding" evidence="7">
        <location>
            <begin position="28"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="region of interest" description="Phosphoenolpyruvate" evidence="7">
        <location>
            <begin position="99"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="7">
        <location>
            <position position="327"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="7">
        <location>
            <position position="355"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="33"/>
        </location>
        <ligand>
            <name>3-phosphoshikimate</name>
            <dbReference type="ChEBI" id="CHEBI:145989"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="129"/>
        </location>
        <ligand>
            <name>phosphoenolpyruvate</name>
            <dbReference type="ChEBI" id="CHEBI:58702"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="354"/>
        </location>
        <ligand>
            <name>3-phosphoshikimate</name>
            <dbReference type="ChEBI" id="CHEBI:145989"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="358"/>
        </location>
        <ligand>
            <name>phosphoenolpyruvate</name>
            <dbReference type="ChEBI" id="CHEBI:58702"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="401"/>
        </location>
        <ligand>
            <name>phosphoenolpyruvate</name>
            <dbReference type="ChEBI" id="CHEBI:58702"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001901"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004811"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009948"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00210"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00275"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ73539.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="451" mass="46884" checksum="C14C53287145AF7A" modified="2015-12-09" version="1">MSHTSAPVPLTSAAGSPLKGTIRVPGDKSISHRSLMFGALAVGRTTVQGLLESEDVLATADAMRAVGAKIEKQDDGSYTVDGIGLGSLLEPQGVIDFGNAGTGVRLTMGIFGSHNIAATFVGDASLSKRPMGRVLDPLREMGTNVIARDGDRLPASIRGAEQTLPITYRVPMPSAQVKSAVLLAGLNAPGVTTVIEPIATRDHTEKMLKGFGADISVSLNEAGERVIKLTGQPELKPQDIDVPADPSSAAFPIVAALIVPGSDVTIENVMLNEHRTGIITTLIEMGGNIELLNKRSAGGEEVADIRVKHSKLKGITVPAKRAPSMIDEYPVLAIAAAFAEGDTFMPGLEELRVKESDRLAAVARGLEANGIPCVETEDTLTVTGGAADIGGGTVVTYLDHRIAMSFLILGIAAHKPVTVDDGAVIATSFPTFTSLFEKLGAKISANSSEAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFK4</accession>
    <name>A0A0M7AFK4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">Protease HtpX homolog</fullName>
            <ecNumber evidence="12">3.4.24.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12 15" type="primary">htpX</name>
        <name evidence="15" type="ORF">LAX5112_03699</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="12">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="12">Binds 1 zinc ion per subunit.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="12">Cell membrane</location>
            <topology evidence="12">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 12">Belongs to the peptidase M48B family.</text>
    </comment>
    <dbReference type="EC" id="3.4.24.-" evidence="12"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ73935.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451184.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03699"/>
    <dbReference type="EnsemblBacteria" id="CTQ73935">
        <property type="protein sequence ID" value="CTQ73935"/>
        <property type="gene ID" value="LAX5112_03699"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004222">
        <property type="term" value="F:metalloendopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00188">
        <property type="entry name" value="Pept_M48_protease_HtpX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022919">
        <property type="entry name" value="Pept_M48_protease_HtpX"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001915">
        <property type="entry name" value="Peptidase_M48"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01435">
        <property type="entry name" value="Peptidase_M48"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 12" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7 12" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="11 12" id="KW-0472">Membrane</keyword>
    <keyword evidence="6 12" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10 12" id="KW-0482">Metalloprotease</keyword>
    <keyword evidence="4 12" id="KW-0645">Protease</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 12" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="8 12" id="KW-0862">Zinc</keyword>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="7"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="30"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="141"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="171"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_M48" evidence="14">
        <location>
            <begin position="71"/>
            <end position="275"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="13">
        <location>
            <begin position="280"/>
            <end position="319"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="13">
        <location>
            <begin position="288"/>
            <end position="302"/>
        </location>
    </feature>
    <feature type="active site" evidence="12">
        <location>
            <position position="131"/>
        </location>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="130"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <note>catalytic</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="134"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <note>catalytic</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="199"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <note>catalytic</note>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009779"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00188"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF01435"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="CTQ73935.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="319" mass="34361" checksum="CDFB916BB03D00B9" modified="2015-12-09" version="1">MNYVRTAMLLAGMTALFMGLGFMIGGQSGMLIALAIAAAMNVFSYWNSDKMVLRMHHAQEVDERSAPEYYGMVRQLAQNADLPMPKVYIINNPQPNAFATGRNPENAAVAATTGLLDMLSKEEVAGVMAHELAHVKNHDTLIMTITATIAGAISMLANFAFFFGGNRNNPLGFVGVILMMIVAPMAAMIVQMAISRTREYAADRMGAQICGEPMWLASALAKISGGVERIHNPDAEANPATAHMFIMNPLSGERMDNLFSTHPNTQNRIDELRKLSEAGLGTAGRGTFAQSRAPQSGPWGGTTGGRSYDEPPRPKGPWG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFU3</accession>
    <name>A0A0M7AFU3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Mannosylfructose-phosphate synthase</fullName>
            <ecNumber evidence="2">2.4.1.246</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">mfpsA_2</name>
        <name evidence="2" type="ORF">LAX5112_03648</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.4.1.246" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73759.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672991.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03648"/>
    <dbReference type="EnsemblBacteria" id="CTQ73759">
        <property type="protein sequence ID" value="CTQ73759"/>
        <property type="gene ID" value="LAX5112_03648"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0103011">
        <property type="term" value="F:mannosylfructose-phosphate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001296">
        <property type="entry name" value="Glyco_trans_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00534">
        <property type="entry name" value="Glycos_transf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glycos_transf_1" evidence="1">
        <location>
            <begin position="165"/>
            <end position="328"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00534"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73759.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="352" mass="37632" checksum="D9D0C858D8B5AE76" modified="2015-12-09" version="1">MPDKRLVFAYPGDLETLTGGYGYDRRVITGLAANSWDVRLLSLGPGFPFPSRKTLQAVDEALSALSDDTVVIIDGLAYGVVDQAAGKHGKRLRLIALVHHPLCRENGLSKDVAERLLASEGAALSHVRHVIVTSPATAVQIEDLFGTSKDAISIALPGTEVLEQRRNASEGAIRLLSIGTVTQRKGYDLLFESLGHLKEMDWHLDIVGGLEADPGCVVALKNQLDTLALTGRITFHGAVPQEKLSDYYCSADVFVLASRYEGYGMAYTEALAHGLPVIGSGAGAVKDTLSVGGAIYCGVEDVQALTAALSTLMSDAEARRHLATEARQAAHSLPSWEDAVRVFETVIEKVAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGZ8</accession>
    <name>A0A0M7AGZ8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Acid-resistance membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03349</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72884.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672763.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72884">
        <property type="protein sequence ID" value="CTQ72884"/>
        <property type="gene ID" value="LAX5112_03349"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005325">
        <property type="entry name" value="DUF308_memb"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03729">
        <property type="entry name" value="DUF308"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="21"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="45"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="75"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="100"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="130"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="156"/>
            <end position="182"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72884.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="187" mass="19448" checksum="1C1BCF5F216B0AFA" modified="2015-12-09" version="1">MSDAVQSLEDMKTKIQENWGWFLALGIALVLGGMILIAAPLATSIAVTILIAAVLFVGGLVQIYQAFKTQGTAAFIWNMITGVIAVIGGVVIYVNPLAGTLALTLVIAAVFAAQGISQIVMAFKLKPHEGWVWVLIAGVVSLAAGVMIWMDLPGSAAWALGLIAGISVLINGWSYIAIALAARASKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AI70</accession>
    <name>A0A0M7AI70_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative adenylyltransferase/sulfurtransferase MoeZ</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">moeZ</name>
        <name evidence="2" type="ORF">LAX5112_03826</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74291.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03826"/>
    <dbReference type="EnsemblBacteria" id="CTQ74291">
        <property type="protein sequence ID" value="CTQ74291"/>
        <property type="gene ID" value="LAX5112_03826"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016779">
        <property type="term" value="F:nucleotidyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008641">
        <property type="term" value="F:ubiquitin-like modifier activating enzyme activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045886">
        <property type="entry name" value="ThiF/MoeB/HesA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000594">
        <property type="entry name" value="ThiF_NAD_FAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035985">
        <property type="entry name" value="Ubiquitin-activating_enz"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10953">
        <property type="entry name" value="PTHR10953"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00899">
        <property type="entry name" value="ThiF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69572">
        <property type="entry name" value="SSF69572"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="ThiF" evidence="1">
        <location>
            <begin position="1"/>
            <end position="212"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74291.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="234" mass="25014" checksum="A2A86DACCF12662E" modified="2015-12-09" version="1">MIGAGGLGAPVLQYLAAAGVGTLGIVDDDAVSLSNLQRQVIHDTNQLGEPKVASAAEAIARLNPNVEVRPFPFRITGQNALQLISAFDLVVDGSDNFDTRYLMSDACFFAKKPLVTAAVGQFDGSITTLRPFENSPDGAPNPTYRCLFPQKPRAGLLPTCEQAGVLGALTGILGTMQAMEVLKELTGTGEGLTGRLMMFDAKAFRMETIRYKRSPKNPLNGDNPKTWAELLEEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AID6</accession>
    <name>A0A0M7AID6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 5">30S ribosomal protein S1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">rpsA</name>
        <name evidence="7" type="ORF">LAX5112_03567</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4 5">Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the bacterial ribosomal protein bS1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73533.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672933.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03567"/>
    <dbReference type="EnsemblBacteria" id="CTQ73533">
        <property type="protein sequence ID" value="CTQ73533"/>
        <property type="gene ID" value="LAX5112_03567"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035104">
        <property type="entry name" value="Ribosomal_protein_S1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000110">
        <property type="entry name" value="Ribosomal_S1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022967">
        <property type="entry name" value="S1_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003029">
        <property type="entry name" value="S1_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10724:SF7">
        <property type="entry name" value="PTHR10724:SF7"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00575">
        <property type="entry name" value="S1"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002111">
        <property type="entry name" value="RpsA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00681">
        <property type="entry name" value="RIBOSOMALS1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00316">
        <property type="entry name" value="S1"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00717">
        <property type="entry name" value="rpsA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50126">
        <property type="entry name" value="S1"/>
        <property type="match status" value="6"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <keyword evidence="5" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="5" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="5" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="S1 motif" evidence="6">
        <location>
            <begin position="27"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="domain" description="S1 motif" evidence="6">
        <location>
            <begin position="111"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="domain" description="S1 motif" evidence="6">
        <location>
            <begin position="198"/>
            <end position="266"/>
        </location>
    </feature>
    <feature type="domain" description="S1 motif" evidence="6">
        <location>
            <begin position="283"/>
            <end position="353"/>
        </location>
    </feature>
    <feature type="domain" description="S1 motif" evidence="6">
        <location>
            <begin position="370"/>
            <end position="440"/>
        </location>
    </feature>
    <feature type="domain" description="S1 motif" evidence="6">
        <location>
            <begin position="453"/>
            <end position="528"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006767"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00016782"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00025604"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRNR" id="PIRNR002111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50126"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ73533.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="565" mass="62763" checksum="39D69AC36765BBDE" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIP9</accession>
    <name>A0A0M7AIP9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 10">3-oxoacyl-[acyl-carrier-protein] synthase 2</fullName>
            <ecNumber evidence="3 10">2.3.1.179</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="primary">fabF_2</name>
        <name evidence="14" type="ORF">LAX5112_03870</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Involved in the type II fatty acid elongation cycle. Catalyzes the elongation of a wide range of acyl-ACP by the addition of two carbons from malonyl-ACP to an acyl acceptor. Can efficiently catalyze the conversion of palmitoleoyl-ACP (cis-hexadec-9-enoyl-ACP) to cis-vaccenoyl-ACP (cis-octadec-11-enoyl-ACP), an essential step in the thermal regulation of fatty acid composition.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>(9Z)-hexadecenoyl-[ACP] + H(+) + malonyl-[ACP] = 3-oxo-(11Z)-octadecenoyl-[ACP] + CO2 + holo-[ACP]</text>
            <dbReference type="Rhea" id="RHEA:55040"/>
            <dbReference type="Rhea" id="RHEA-COMP:9623"/>
            <dbReference type="Rhea" id="RHEA-COMP:9685"/>
            <dbReference type="Rhea" id="RHEA-COMP:10800"/>
            <dbReference type="Rhea" id="RHEA-COMP:14074"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:64479"/>
            <dbReference type="ChEBI" id="CHEBI:78449"/>
            <dbReference type="ChEBI" id="CHEBI:83989"/>
            <dbReference type="ChEBI" id="CHEBI:138538"/>
            <dbReference type="EC" id="2.3.1.179"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>a fatty acyl-[ACP] + H(+) + malonyl-[ACP] = a 3-oxoacyl-[ACP] + CO2 + holo-[ACP]</text>
            <dbReference type="Rhea" id="RHEA:22836"/>
            <dbReference type="Rhea" id="RHEA-COMP:9623"/>
            <dbReference type="Rhea" id="RHEA-COMP:9685"/>
            <dbReference type="Rhea" id="RHEA-COMP:9916"/>
            <dbReference type="Rhea" id="RHEA-COMP:14125"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:64479"/>
            <dbReference type="ChEBI" id="CHEBI:78449"/>
            <dbReference type="ChEBI" id="CHEBI:78776"/>
            <dbReference type="ChEBI" id="CHEBI:138651"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1 10">Lipid metabolism; fatty acid biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 10 12">Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.179" evidence="3 10"/>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74461.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03870"/>
    <dbReference type="EnsemblBacteria" id="CTQ74461">
        <property type="protein sequence ID" value="CTQ74461"/>
        <property type="gene ID" value="LAX5112_03870"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00094"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004315">
        <property type="term" value="F:3-oxoacyl-[acyl-carrier-protein] synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006633">
        <property type="term" value="P:fatty acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd00834">
        <property type="entry name" value="KAS_I_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.47.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017568">
        <property type="entry name" value="3-oxoacyl-ACP_synth-2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000794">
        <property type="entry name" value="Beta-ketoacyl_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018201">
        <property type="entry name" value="Ketoacyl_synth_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014031">
        <property type="entry name" value="Ketoacyl_synth_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014030">
        <property type="entry name" value="Ketoacyl_synth_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020841">
        <property type="entry name" value="PKS_Beta-ketoAc_synthase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016039">
        <property type="entry name" value="Thiolase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11712">
        <property type="entry name" value="PTHR11712"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00109">
        <property type="entry name" value="ketoacyl-synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02801">
        <property type="entry name" value="Ketoacyl-synt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000447">
        <property type="entry name" value="KAS_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00825">
        <property type="entry name" value="PKS_KS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53901">
        <property type="entry name" value="SSF53901"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03150">
        <property type="entry name" value="fabF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00606">
        <property type="entry name" value="B_KETOACYL_SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 10 14" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="8 10" id="KW-0275">Fatty acid biosynthesis</keyword>
    <keyword evidence="6" id="KW-0276">Fatty acid metabolism</keyword>
    <keyword evidence="5 10" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="7" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10 12 14" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PKS_KS" evidence="13">
        <location>
            <begin position="4"/>
            <end position="411"/>
        </location>
    </feature>
    <feature type="active site" evidence="11">
        <location>
            <position position="160"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008467"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012356"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00014657"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022832"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023160"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRNR" id="PIRNR000447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRSR" id="PIRSR000447-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU003694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="SMART" id="SM00825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="CTQ74461.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="411" mass="42910" checksum="F5DD5E604BFF5B8A" modified="2015-12-09" version="1">MVTPLGGTADVTWKNILEGKSGANKVTDFKIDDVACQIAAQIPRGSSDEGNFNPDDWMEVKEQRKVDDFILYAIAASDQALADSGWKPTTYEDQTRSGVLIGSGIGGLQGIEQAAHILAEKGPRRVSPFFIPGRLINLAGGYVSIRHGLKGPNHAVVTACSTGAHAIGDASRLIAYGDADVMVAGGTESPICRLSLVGFSACRALSTGFNDDPERGSRPYDTDRDGFVMGEGAGIVVLEEYEHAVARGAKIYAEVVGYGLSGDAYHITAPSMDGDGAYRCMEAALNRAGLTAADVDYVNAHGTSTPLGDEIELGAVTRLAGDHAPNLTMSSTKSSIGHLLGAAGAVEAIFSVLAIRDGIAPPTINLDNPSVETEIDLVAHKAKQMNIDVALSNSFGFGGTNASLVFRKVAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIU0</accession>
    <name>A0A0M7AIU0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">LysM domain/BON superfamily protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03883</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74501.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673188.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03883"/>
    <dbReference type="EnsemblBacteria" id="CTQ74501">
        <property type="protein sequence ID" value="CTQ74501"/>
        <property type="gene ID" value="LAX5112_03883"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00118">
        <property type="entry name" value="LysM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.350.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007055">
        <property type="entry name" value="BON_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018392">
        <property type="entry name" value="LysM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036779">
        <property type="entry name" value="LysM_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04972">
        <property type="entry name" value="BON"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01476">
        <property type="entry name" value="LysM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00257">
        <property type="entry name" value="LysM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54106">
        <property type="entry name" value="SSF54106"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50914">
        <property type="entry name" value="BON"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51782">
        <property type="entry name" value="LYSM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="BON" evidence="1">
        <location>
            <begin position="17"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="domain" description="LysM" evidence="2">
        <location>
            <begin position="92"/>
            <end position="141"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50914"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51782"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ74501.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="144" mass="15367" checksum="55FD216062140C5D" modified="2015-12-09" version="1">MGFFDFVKDAGKSLWGDDEAPQDSAKAIEKEVAELGLDGDVKVEVEGDTVKVAGAAPTQEAREKLILAVGNVLGVAKVEEEIEVAAAEPAAKFHTVEKGDTLWAVSEKAYGNGAKYEAIFEANKPMLSHPDKIYPGQVLRIPAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJ27</accession>
    <name>A0A0M7AJ27_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">UvrABC system protein C</fullName>
            <shortName evidence="7">Protein UvrC</shortName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Excinuclease ABC subunit C</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7 12" type="primary">uvrC</name>
        <name evidence="12" type="ORF">LAX5112_04132</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Interacts with UvrB in an incision complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the UvrC family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75165.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673391.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04132"/>
    <dbReference type="EnsemblBacteria" id="CTQ75165">
        <property type="protein sequence ID" value="CTQ75165"/>
        <property type="gene ID" value="LAX5112_04132"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009380">
        <property type="term" value="C:excinuclease repair complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009381">
        <property type="term" value="F:excinuclease ABC activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006289">
        <property type="term" value="P:nucleotide-excision repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009432">
        <property type="term" value="P:SOS response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.340">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1440.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00203">
        <property type="entry name" value="UvrC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000305">
        <property type="entry name" value="GIY-YIG_endonuc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035901">
        <property type="entry name" value="GIY-YIG_endonuc_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003583">
        <property type="entry name" value="Hlx-hairpin-Hlx_DNA-bd_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010994">
        <property type="entry name" value="RuvA_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001943">
        <property type="entry name" value="UVR_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036876">
        <property type="entry name" value="UVR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004791">
        <property type="entry name" value="UvrC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001162">
        <property type="entry name" value="UvrC_RNase_H_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038476">
        <property type="entry name" value="UvrC_RNase_H_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01541">
        <property type="entry name" value="GIY-YIG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02151">
        <property type="entry name" value="UVR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08459">
        <property type="entry name" value="UvrC_HhH_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00465">
        <property type="entry name" value="GIYc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00278">
        <property type="entry name" value="HhH1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46600">
        <property type="entry name" value="SSF46600"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47781">
        <property type="entry name" value="SSF47781"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82771">
        <property type="entry name" value="SSF82771"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00194">
        <property type="entry name" value="uvrC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50164">
        <property type="entry name" value="GIY_YIG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50151">
        <property type="entry name" value="UVR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50165">
        <property type="entry name" value="UVRC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2 7" id="KW-0227">DNA damage</keyword>
    <keyword evidence="3 7" id="KW-0228">DNA excision</keyword>
    <keyword evidence="5 7" id="KW-0234">DNA repair</keyword>
    <keyword evidence="4 7" id="KW-0267">Excision nuclease</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 7" id="KW-0742">SOS response</keyword>
    <feature type="domain" description="GIY-YIG" evidence="10">
        <location>
            <begin position="38"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="domain" description="UVR" evidence="9">
        <location>
            <begin position="226"/>
            <end position="261"/>
        </location>
    </feature>
    <feature type="domain" description="UVRC" evidence="11">
        <location>
            <begin position="277"/>
            <end position="530"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="476"/>
            <end position="504"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="8">
        <location>
            <begin position="1"/>
            <end position="16"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022769"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022881"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023236"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00203"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50151"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50164"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50165"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ75165.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="656" mass="72735" checksum="6FD953706D8DE44A" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJZ7</accession>
    <name>A0A0M7AJZ7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04255</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75485.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75485">
        <property type="protein sequence ID" value="CTQ75485"/>
        <property type="gene ID" value="LAX5112_04255"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ75485.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="49" mass="5152" checksum="B40E3A4BF0A529F0" modified="2015-12-09" version="1">MVVNNLYENATASEAASEAISAQGLAHTKSELVGRPAYQNAQNQGLAVY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKC8</accession>
    <name>A0A0M7AKC8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04191</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75339.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75339">
        <property type="protein sequence ID" value="CTQ75339"/>
        <property type="gene ID" value="LAX5112_04191"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ75339.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="36" mass="4270" checksum="58CDA5254DC25A43" modified="2015-12-09" version="1">MFKALFQKRRRNYQWKPAIDTSNPRIAASLTTFPTN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKP2</accession>
    <name>A0A0M7AKP2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Protein-export membrane protein SecF</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">secF</name>
        <name evidence="11" type="ORF">LAX5112_04067</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.</text>
    </comment>
    <comment type="subunit">
        <text evidence="9">Forms a complex with SecD. Part of the essential Sec protein translocation apparatus which comprises SecA, SecYEG and auxiliary proteins SecDF-YajC and YidC.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cell membrane</location>
            <topology evidence="9">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the SecD/SecF family. SecF subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ74976.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040452003.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04067"/>
    <dbReference type="EnsemblBacteria" id="CTQ74976">
        <property type="protein sequence ID" value="CTQ74976"/>
        <property type="gene ID" value="LAX5112_04067"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015450">
        <property type="term" value="F:protein-transporting ATPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0065002">
        <property type="term" value="P:intracellular protein transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006605">
        <property type="term" value="P:protein targeting"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043952">
        <property type="term" value="P:protein transport by the Sec complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01464_B">
        <property type="entry name" value="SecF_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022813">
        <property type="entry name" value="SecD/SecF_arch_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022645">
        <property type="entry name" value="SecD/SecF_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022646">
        <property type="entry name" value="SecD/SecF_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005665">
        <property type="entry name" value="SecF_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000731">
        <property type="entry name" value="SSD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30081">
        <property type="entry name" value="PTHR30081"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07549">
        <property type="entry name" value="Sec_GG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02355">
        <property type="entry name" value="SecD_SecF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01755">
        <property type="entry name" value="SECFTRNLCASE"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00916">
        <property type="entry name" value="2A0604s01"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00966">
        <property type="entry name" value="3a0501s07"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50156">
        <property type="entry name" value="SSD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 9" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="5 9" id="KW-0653">Protein transport</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 9" id="KW-0811">Translocation</keyword>
    <keyword evidence="4 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2 9" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="20"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="135"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="162"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="190"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="242"/>
            <end position="259"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="265"/>
            <end position="292"/>
        </location>
    </feature>
    <feature type="domain" description="SSD" evidence="10">
        <location>
            <begin position="159"/>
            <end position="291"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023010"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50156"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ74976.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="316" mass="34682" checksum="456000E51BCA0D44" modified="2015-12-09" version="1">MLLRLVPDNTHFKFMWLRKISFPLSIVLVVASLAGFFTVGMNYGIDFKGGTIIEIKTDGPADIGFIRSELSSLQLGDIQVQEFGAPDDILIRIEEQPGGELAQQAVVAKVRTIFADDNVDFRRVEVVGPRVSSELARAGAIAVAASLLAIMFYIWFRFEWHFAVGAILTTANDVVVTIGLFVLLQLDFSLSSIAAVLTIIGYSLNDTVVVYDRIRENLRKYKKRPLTEILDQSINETLSRTTMTSVTTLLALLALYIFGGEVIQSFTLAMIFGIVIGTYSSIFLAAPFLILLNLRPDALSSKDDDGGKDEGTEATA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AL12</accession>
    <name>A0A0M7AL12_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04374</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75825.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75825">
        <property type="protein sequence ID" value="CTQ75825"/>
        <property type="gene ID" value="LAX5112_04374"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ75825.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="58" mass="6447" checksum="D6765B736445AFE5" modified="2015-12-09" version="1">MAVYTKAKADFEADKIVDKATVKAELQAAFGPVERSFERATKRFRLSESDAERAPEAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AL78</accession>
    <name>A0A0M7AL78_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Carbon monoxide dehydrogenase medium chain</fullName>
            <ecNumber evidence="3">1.2.99.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">cutM</name>
        <name evidence="3" type="ORF">LAX5112_04311</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.2.99.2" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000022">
        <property type="protein sequence ID" value="CTQ75639.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008196400.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000022.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04311"/>
    <dbReference type="EnsemblBacteria" id="CTQ75639">
        <property type="protein sequence ID" value="CTQ75639"/>
        <property type="gene ID" value="LAX5112_04311"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071949">
        <property type="term" value="F:FAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.43.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.465.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005107">
        <property type="entry name" value="CO_DH_flav_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036683">
        <property type="entry name" value="CO_DH_flav_C_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016166">
        <property type="entry name" value="FAD-bd_PCMH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036318">
        <property type="entry name" value="FAD-bd_PCMH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016167">
        <property type="entry name" value="FAD-bd_PCMH_sub1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016169">
        <property type="entry name" value="FAD-bd_PCMH_sub2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002346">
        <property type="entry name" value="Mopterin_DH_FAD-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03450">
        <property type="entry name" value="CO_deh_flav_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00941">
        <property type="entry name" value="FAD_binding_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01092">
        <property type="entry name" value="CO_deh_flav_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55447">
        <property type="entry name" value="SSF55447"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56176">
        <property type="entry name" value="SSF56176"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51387">
        <property type="entry name" value="FAD_PCMH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0274">FAD</keyword>
    <keyword evidence="1" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FAD-binding PCMH-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="170"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51387"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ75639.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="266" mass="27033" checksum="97D7CCBE08CBF42C" modified="2015-12-09" version="1">MYETTYHRAGSAAEAAELLAKADDGKILGGGQTLLPTMKQRLAAPSDLVDVTQIPEMKGICADGDGVAIGAATTHAEVASNDIVKSKLPGLASLAGGIGDPAVRHMGTIGGSVANNDPAADYPSALVALGATVVTNKRELSAEDFFTGMFETALDEDEVVQSVKFPGAQKSAYAKYPNPASRYAMAGVFVAQGSDGSIKVAVTGAGQDGVFRMNDMEAALGSNWSADAVSGIAPNADDLLSDLHGSAAYRANLVTVMAKRAVAAAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALN4</accession>
    <name>A0A0M7ALN4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Lysine-arginine-ornithine-binding periplasmic protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_04360</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75789.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04360"/>
    <dbReference type="EnsemblBacteria" id="CTQ75789">
        <property type="protein sequence ID" value="CTQ75789"/>
        <property type="gene ID" value="LAX5112_04360"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809445" evidence="2">
        <location>
            <begin position="23"/>
            <end position="264"/>
        </location>
    </feature>
    <feature type="domain" description="PBPb" evidence="3">
        <location>
            <begin position="36"/>
            <end position="260"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00497"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ75789.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="264" mass="29303" checksum="928D7D4006BA414D" modified="2015-12-09" version="1">MKTVRKCLLTICAAVTAVCAGAALADADEHVRLVTLVQDADYAPFMTAEVSGPAGIYAEIIKEADKRLLGYTIELTSAPWTRAKFLVQSGKVNGLVGTYHKPIRRPWIRHFSTPMAKETIYVYCREGVAQDHWDYPKDYAGLLFSNNAGFATPGSAFFEMVSAGKIQLIEEQTTDANLRLLQLGRADCYVQQKEAVEISIQSNNFDKIIPIREVQTETAHIGYSQHWSAEDGDTFIADMDSVLKQMTADGTIRKIIMNWTDGTI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALU0</accession>
    <name>A0A0M7ALU0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Cystine transporter subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_04383</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75849.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673600.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000023.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04383"/>
    <dbReference type="EnsemblBacteria" id="CTQ75849">
        <property type="protein sequence ID" value="CTQ75849"/>
        <property type="gene ID" value="LAX5112_04383"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809443" evidence="2">
        <location>
            <begin position="21"/>
            <end position="270"/>
        </location>
    </feature>
    <feature type="domain" description="PBPb" evidence="3">
        <location>
            <begin position="33"/>
            <end position="247"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00497"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ75849.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="270" mass="30318" checksum="172CC30D61FD1F22" modified="2015-12-09" version="1">MVSVRLGLVLVFASISGALASDSNCTRVTASAHPDYPPYHWREGGRIVGASVDLNKMIFQEIGVSFDAVFTGPWKRVLKTAENGDIDFLMSLKKTDERSAFLDFTDTPAFENPFTVFTLRNQSFPLTVWEDLKGRYGAKNAGDRYGEPFDSYVANVLELSDNFSFQDNVNQLLVGRIDYIIHGRYVGQAQFGAIQGGEDIVPVDWNVMNGFVHSGFSLNSPCRHLKGRVNKRYGELLADGTADRIISENIGRWIFRSRNYELRKKVVDID</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALV3</accession>
    <name>A0A0M7ALV3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Membrane fusion protein (MFP) family protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">prsE</name>
        <name evidence="10" type="ORF">LAX5112_04217</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cell inner membrane</location>
            <topology evidence="8">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 8">Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75406.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04217"/>
    <dbReference type="EnsemblBacteria" id="CTQ75406">
        <property type="protein sequence ID" value="CTQ75406"/>
        <property type="gene ID" value="LAX5112_04217"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015031">
        <property type="term" value="P:protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010129">
        <property type="entry name" value="T1SS_HlyD"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01843">
        <property type="entry name" value="type_I_hlyD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 8" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="3 8" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="9" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="7" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2 8" id="KW-0813">Transport</keyword>
    <feature type="coiled-coil region" evidence="9">
        <location>
            <begin position="252"/>
            <end position="286"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022519"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU365093"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ75406.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="432" mass="48521" checksum="7E63C8EDCE7EBF03" modified="2015-12-09" version="1">MKQKRKASANPRPFIIAGYATILLTFGVVGAWAAIAKLDKAVIASGEVEVEANRREVQHLEGGIVKKKDVAEGQVVKAGDVLIELRDVEARADLQVVTIRLRIGEAVEARLRAERNLEDHIEFKESLLTDKTPEVVDAVADQQRIFDDRTSILKSQQDILTNRVDQLKREKLGLGEQKEAYEARAKVLLGRLDRLREGLESGSIQKNLFATYEDEYIEVKAFVASMDTEIAKVEKSIGETEFQMLQTRQEFRERASTEYKEIYGQIQELREQSKVAQDVLDRTKIRAPIDGVAQNIKLNGFVIQRGQTLLEIVPDTDEMIINARVQPLDIDSVSEGLTAEVKFTSFPSRLMPIIEGEVLTVSRGTITPEDTRQTPYYLARVQVSKDVLPEDVRGRLSAGMPADVLITSGERTVVDYMISPITDAIWKSLREE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AM61</accession>
    <name>A0A0M7AM61_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Indolepyruvate ferredoxin oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">LAX5112_04528</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the pyruvate:ferredoxin/flavodoxin oxidoreductase family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000025">
        <property type="protein sequence ID" value="CTQ76228.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673745.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000025.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04528"/>
    <dbReference type="EnsemblBacteria" id="CTQ76228">
        <property type="protein sequence ID" value="CTQ76228"/>
        <property type="gene ID" value="LAX5112_04528"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016903">
        <property type="term" value="F:oxidoreductase activity, acting on the aldehyde or oxo group of donors"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030976">
        <property type="term" value="F:thiamine pyrophosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07034">
        <property type="entry name" value="TPP_PYR_PFOR_IOR-alpha_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.920.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019752">
        <property type="entry name" value="Pyrv/ketoisovalerate_OxRed_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002880">
        <property type="entry name" value="Pyrv_Fd/Flavodoxin_OxRdtase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002869">
        <property type="entry name" value="Pyrv_flavodox_OxRed_cen"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029061">
        <property type="entry name" value="THDP-binding"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011766">
        <property type="entry name" value="TPP_enzyme-bd_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01558">
        <property type="entry name" value="POR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02775">
        <property type="entry name" value="TPP_enzyme_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52518">
        <property type="entry name" value="SSF52518"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53323">
        <property type="entry name" value="SSF53323"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TPP_enzyme_C" evidence="5">
        <location>
            <begin position="462"/>
            <end position="547"/>
        </location>
    </feature>
    <feature type="domain" description="POR" evidence="4">
        <location>
            <begin position="735"/>
            <end position="920"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1152"/>
            <end position="1173"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF01558"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF02775"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ76228.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="1173" mass="128013" checksum="425C237DC9BBF447" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AM62</accession>
    <name>A0A0M7AM62_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Glutathione import ATP-binding protein GsiA</fullName>
            <ecNumber evidence="8">3.6.3.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">gsiA_5</name>
        <name evidence="8" type="ORF">LAX5112_04305</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.-" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000022">
        <property type="protein sequence ID" value="CTQ75621.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673534.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000022.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04305"/>
    <dbReference type="EnsemblBacteria" id="CTQ75621">
        <property type="protein sequence ID" value="CTQ75621"/>
        <property type="gene ID" value="LAX5112_04305"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015833">
        <property type="term" value="P:peptide transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013563">
        <property type="entry name" value="Oligopep_ABC_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08352">
        <property type="entry name" value="oligo_HPY"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ABC transporter" evidence="7">
        <location>
            <begin position="4"/>
            <end position="249"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="7">
        <location>
            <begin position="268"/>
            <end position="518"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="36"/>
            <end position="43"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="311"/>
            <end position="318"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ75621.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="531" mass="57965" checksum="8B739B0EF63DB6A9" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMK4</accession>
    <name>A0A0M7AMK4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">p-hydroxyphenylacetate 3-hydroxylase, reductase component</fullName>
            <ecNumber evidence="2">1.5.1.36</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">C1-hpah_2</name>
        <name evidence="2" type="ORF">LAX5112_04570</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.5.1.36" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000026">
        <property type="protein sequence ID" value="CTQ76365.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673764.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000026.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04570"/>
    <dbReference type="EnsemblBacteria" id="CTQ76365">
        <property type="protein sequence ID" value="CTQ76365"/>
        <property type="gene ID" value="LAX5112_04570"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0036382">
        <property type="term" value="F:flavin reductase (NADH) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010181">
        <property type="term" value="F:FMN binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002563">
        <property type="entry name" value="Flavin_Rdtase-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012349">
        <property type="entry name" value="Split_barrel_FMN-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01613">
        <property type="entry name" value="Flavin_Reduct"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00903">
        <property type="entry name" value="Flavin_Reduct"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Flavin_Reduct" evidence="1">
        <location>
            <begin position="13"/>
            <end position="156"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00903"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76365.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="307" mass="32591" checksum="8ACD96EECE9128DF" modified="2015-12-09" version="1">MKPIDPKELRGAFGRFMTGVTVVTTRRADGTPVGFTANSFTSVSLDPPLLLVCPGKFLSSYDAFAECEQFCVSILEDGQTDVANTFAGYKGDRFAKTPHDFDADGIAFPVGALARFSCKAHQTVPAGDHVILIGEVIGFAQKAGQGLGYADGQFFSLARERSARDPAARVNIAGAVVRYNGQVLLEKTPVGYRLPEFSVPDKTGLRKALQATLQDNGVSASCGAVYSVFDDADASTHFAYLLAQASHVAPDAKLTAVPPEELATLTYASPPLASMMARYARECATGNLNCYLGDTMTGEIHTLSEGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMQ3</accession>
    <name>A0A0M7AMQ3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Adenylate cyclase 1</fullName>
            <ecNumber evidence="3">4.6.1.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">cyaA_15</name>
        <name evidence="3" type="ORF">LAX5112_04268</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="4.6.1.1" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75510.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673497.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000021.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04268"/>
    <dbReference type="EnsemblBacteria" id="CTQ75510">
        <property type="protein sequence ID" value="CTQ75510"/>
        <property type="gene ID" value="LAX5112_04268"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004016">
        <property type="term" value="F:adenylate cyclase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009190">
        <property type="term" value="P:cyclic nucleotide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035556">
        <property type="term" value="P:intracellular signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07302">
        <property type="entry name" value="CHD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1230">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001054">
        <property type="entry name" value="A/G_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00211">
        <property type="entry name" value="Guanylate_cyc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00044">
        <property type="entry name" value="CYCc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50125">
        <property type="entry name" value="GUANYLATE_CYCLASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0456">Lyase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="27"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="51"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="84"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="110"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="137"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="178"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="domain" description="Guanylate cyclase" evidence="2">
        <location>
            <begin position="244"/>
            <end position="376"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ75510.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="428" mass="45761" checksum="43BEDE578AA76997" modified="2015-12-09" version="1">MISKSSPDTQTEHLILAAEREAQMVSAFARLIITTIAMTVFLLAGGIKLPVAPVVLTYLCSYAVVSIASAVFSLKRLFNPKLSLVFTAIDGISLALLIAFALKITGTSFSLHGAVPGFVFFFSILILATMRYTLGPVVVAFFSFAITWGVVSFVTGDAHVDTAAATDPLFFFGPVQNAARWGFIGIAAILCLLAVYRRRKTLETAIAAANRTANLSRYLPDRVADVVAEQGIDALKSGRLQESSVLFVDIRGFTGISETLEPKELSALLSEFRAIISEEVERHSGIIDKFIGDAVMAVFGVPEDLSESEANTLHCATSILEKIAAWNRLRETGEAPPVRVTIGAHCGMVFAGAVGTKSRMEYTVLGDTVNVAAPLQEAAKTTSSGLVVSKDLLDRSGVSPTVTGSWSALEDTSIRGRTGQVSILEYVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="31" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMR7</accession>
    <name>A0A0M7AMR7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">HTH-type transcriptional repressor CytR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">cytR_4</name>
        <name evidence="5" type="ORF">LAX5112_04592</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000026">
        <property type="protein sequence ID" value="CTQ76428.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008196791.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000026.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04592"/>
    <dbReference type="EnsemblBacteria" id="CTQ76428">
        <property type="protein sequence ID" value="CTQ76428"/>
        <property type="gene ID" value="LAX5112_04592"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01392">
        <property type="entry name" value="HTH_LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000843">
        <property type="entry name" value="HTH_LacI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046335">
        <property type="entry name" value="LacI/GalR-like_sensor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00356">
        <property type="entry name" value="LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13377">
        <property type="entry name" value="Peripla_BP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00036">
        <property type="entry name" value="HTHLACI"/>
    </dbReference>
    <dbReference type="SMART" id="SM00354">
        <property type="entry name" value="HTH_LACI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50932">
        <property type="entry name" value="HTH_LACI_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH lacI-type" evidence="4">
        <location>
            <begin position="9"/>
            <end position="63"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ76428.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="343" mass="36950" checksum="E0C86132F17A5578" modified="2015-12-09" version="1">MDDPGSRPATIEDVAKLAGVSIATVSRALRSPEKVAESTRKKVTAAIARTGYTANAMAQNLRMQRSQMVLVLASAIADPNFAGILTGLEKAANDRGYGVLIGNTEGTTGLEQNYLRFLSTGMADGLILLTGHIPVAGEPQTPLTALPPIIATERPVDRADISYVGVDDVASAKMATEYLISLGHRRIVFISGGPADVRSDLRHSGYQKGLMESAVTLRDWRLEGDGSAESGRAAVERLFIKDDLPTAFFCFNDNTAIGVISALQMRGYRVPVDFSVLGFDDIPFANNFTPGLTTIRQPRQHIGEMAMSLLLDKLANRTLSVQTHLLHGDLIVRESCAGVRKDR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AN14</accession>
    <name>A0A0M7AN14_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04550</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000025">
        <property type="protein sequence ID" value="CTQ76289.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76289">
        <property type="protein sequence ID" value="CTQ76289"/>
        <property type="gene ID" value="LAX5112_04550"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ76289.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="78" mass="8656" checksum="8A71BEA83A901FBE" modified="2015-12-09" version="1">MTVTDAEGADDIVYYQNMDISDLSYQQFGNDLVFYSATDAADGSLQSYVQLTDWFVTTDNVEKLQIDAGVIVLDTLFA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AN87</accession>
    <name>A0A0M7AN87_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04399</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75892.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75892">
        <property type="protein sequence ID" value="CTQ75892"/>
        <property type="gene ID" value="LAX5112_04399"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ75892.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="55" mass="6019" checksum="CF6CF253618CD49C" modified="2015-12-09" version="1">MNTRAKFKQVDVKRAIKAVVDAGQPVQEIEITSEGTIRIIVNNDNSLAKGPEPDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AN91</accession>
    <name>A0A0M7AN91_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative HTH-type transcriptional regulator YidP</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yidP</name>
        <name evidence="2" type="ORF">LAX5112_04330</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000022">
        <property type="protein sequence ID" value="CTQ75690.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008189726.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000022.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04330"/>
    <dbReference type="EnsemblBacteria" id="CTQ75690">
        <property type="protein sequence ID" value="CTQ75690"/>
        <property type="gene ID" value="LAX5112_04330"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07377">
        <property type="entry name" value="WHTH_GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1410.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028978">
        <property type="entry name" value="Chorismate_lyase_/UTRA_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000524">
        <property type="entry name" value="Tscrpt_reg_HTH_GntR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011663">
        <property type="entry name" value="UTRA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00392">
        <property type="entry name" value="GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07702">
        <property type="entry name" value="UTRA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00035">
        <property type="entry name" value="HTHGNTR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00345">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00866">
        <property type="entry name" value="UTRA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64288">
        <property type="entry name" value="SSF64288"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50949">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH gntR-type" evidence="1">
        <location>
            <begin position="12"/>
            <end position="80"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75690.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="267" mass="28670" checksum="73FE47BAEE66CC9A" modified="2015-12-09" version="1">MNKHAKSVLPEGAKARQVYLSLRDQISDGRFQDGQTLPGEQKLSEVFGVSRVTVRRALDALAASGLIIRRAGSGTTVSTAGQLDKPVAMNLATLMPQLVEMGQSTTARLLSFSYDAAPDFVASALGLPSDEQVQIATRVRSTNQTPFSHLTTYVPAEIARNYSENDLATTPLFKLLERGGVQIKDAHQSVSATLAGPEVADALDVAVGSALLSLRRVVKDVDGNGVEYLAGLYRPDMFRLEMPLTRVGDGNARHWEPAIGKTHEEGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANL6</accession>
    <name>A0A0M7ANL6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Dimethyl sulfoxide reductase DmsA</fullName>
            <ecNumber evidence="7">1.8.5.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">dmsA</name>
        <name evidence="7" type="ORF">LAX5112_04474</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.8.5.3" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ76121.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04474"/>
    <dbReference type="EnsemblBacteria" id="CTQ76121">
        <property type="protein sequence ID" value="CTQ76121"/>
        <property type="gene ID" value="LAX5112_04474"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009010">
        <property type="entry name" value="Asp_de-COase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006656">
        <property type="entry name" value="Mopterin_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006963">
        <property type="entry name" value="Mopterin_OxRdtase_4Fe-4S_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04879">
        <property type="entry name" value="Molybdop_Fe4S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00384">
        <property type="entry name" value="Molybdopterin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00926">
        <property type="entry name" value="Molybdop_Fe4S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50692">
        <property type="entry name" value="SSF50692"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51669">
        <property type="entry name" value="4FE4S_MOW_BIS_MGD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="2 4" id="KW-0408">Iron</keyword>
    <keyword evidence="3 4" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="1 4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="4Fe-4S Mo/W bis-MGD-type" evidence="6">
        <location>
            <begin position="17"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="912"/>
            <end position="941"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="24"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="27"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="31"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="59"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51669"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ76121.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="941" mass="104038" checksum="EF12690AC9A14444" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANN2</accession>
    <name>A0A0M7ANN2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04542</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000025">
        <property type="protein sequence ID" value="CTQ76267.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04542"/>
    <dbReference type="EnsemblBacteria" id="CTQ76267">
        <property type="protein sequence ID" value="CTQ76267"/>
        <property type="gene ID" value="LAX5112_04542"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="3"/>
            <end position="165"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76267.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="170" mass="18605" checksum="A1FC65759154625E" modified="2015-12-09" version="1">MDVFIRRLSAADVATYRQIRLESLQRHPDVFGTSYEEEAALPDEVFVQQLTTNLILGGGAGEQHITGIVGFIVGGALKVRHKGILWGLYVQPEARGSGLAKALVNTLIDAVKDEVEQIQLSVGAHNVPAARLYQGFGFEPYGLENSALKVGEQYLDEVLMALDLRKLKQS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AP69</accession>
    <name>A0A0M7AP69_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative secreted protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04523</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000025">
        <property type="protein sequence ID" value="CTQ76216.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04523"/>
    <dbReference type="EnsemblBacteria" id="CTQ76216">
        <property type="protein sequence ID" value="CTQ76216"/>
        <property type="gene ID" value="LAX5112_04523"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018725">
        <property type="entry name" value="DUF2259_secreted"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10016">
        <property type="entry name" value="DUF2259"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809632" evidence="1">
        <location>
            <begin position="21"/>
            <end position="245"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76216.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="245" mass="26796" checksum="1697CF9F3235E0CA" modified="2015-12-09" version="1">MRFYQLLVAFFVFITGSMSAAIAGDQARLDILGYSEDGRYFAFEQSGIQDGSGFPYSEIFVIDVHEDKWVSPSPFRRRDEIDDSNGFNPVALLKAARAANRAAADPLLNSLGIDGHGLTVGSNPITEISANPFNMKVNLRPVAPPIDEPMEIQLMEFPLPDDTCASYGAATKGFQLNTIYGGEARVRHLDKSLPKSRGCPIGYRIDKVVSFFPEDKPPVITVIVHMAAHGFEGPDGRFLAISGRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AP78</accession>
    <name>A0A0M7AP78_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Trehalose transport system permease protein SugA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">sugA_3</name>
        <name evidence="7" type="ORF">LAX5112_04601</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000027">
        <property type="protein sequence ID" value="CTQ76467.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673836.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000027.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04601"/>
    <dbReference type="EnsemblBacteria" id="CTQ76467">
        <property type="protein sequence ID" value="CTQ76467"/>
        <property type="gene ID" value="LAX5112_04601"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.370">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035277">
        <property type="entry name" value="MalF_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="28"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="96"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="127"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="178"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="224"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="287"/>
            <end position="306"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="90"/>
            <end position="305"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ76467.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="315" mass="36071" checksum="A6F2033B497010C6" modified="2015-12-09" version="1">MSDTPFNRAAKATPPSVAARIRGLSDRAIAWIFVLPTIFLLLAVNIFPLIWTINLSFTNFRANRPNREVEYIGLRNYERILTDSDIWLTMQATAHFLFWTIFFQVLIGFALAWLINRKFKGNDLWTTLIVLPMMLSPAVVGNFWTFLYQPQIGLFNYGISFLTGIDPSSFQMIGDVTLAPWSIVIVDTWMWTPFVMLICLAGLRSIPDYIYEAAEIDRASKWRQFWTITIPMVLPFLMLAVLFRGIENFKMFDLVVQLTGGGPGSITELTSINLKREAFEKWRTGYASAYAIILFVTVFGLASIYVKALNRVKER</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AP89</accession>
    <name>A0A0M7AP89_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="19">Quinohemoprotein ethanol dehydrogenase type-1</fullName>
            <ecNumber evidence="19">1.1.9.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="19" type="primary">qheDH</name>
        <name evidence="19" type="ORF">LAX5112_04531</name>
    </gene>
    <organism evidence="19 20">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="20" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="20">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>pyrroloquinoline quinone</name>
            <dbReference type="ChEBI" id="CHEBI:58442"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the bacterial PQQ dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.1.9.1" evidence="19"/>
    <dbReference type="EMBL" id="CXWD01000025">
        <property type="protein sequence ID" value="CTQ76236.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673721.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000025.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04531"/>
    <dbReference type="EnsemblBacteria" id="CTQ76236">
        <property type="protein sequence ID" value="CTQ76236"/>
        <property type="gene ID" value="LAX5112_04531"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030288">
        <property type="term" value="C:outer membrane-bounded periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016614">
        <property type="term" value="F:oxidoreductase activity, acting on CH-OH group of donors"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.760.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009056">
        <property type="entry name" value="Cyt_c-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036909">
        <property type="entry name" value="Cyt_c-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018391">
        <property type="entry name" value="PQQ_beta_propeller_repeat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017512">
        <property type="entry name" value="PQQ_MeOH/EtOH_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002372">
        <property type="entry name" value="PQQ_repeat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011047">
        <property type="entry name" value="Quinoprotein_ADH-like_supfam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001479">
        <property type="entry name" value="Quinoprotein_DH_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13442">
        <property type="entry name" value="Cytochrome_CBB3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13360">
        <property type="entry name" value="PQQ_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00564">
        <property type="entry name" value="PQQ"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46626">
        <property type="entry name" value="SSF46626"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50998">
        <property type="entry name" value="SSF50998"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03075">
        <property type="entry name" value="PQQ_enz_alc_DH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00364">
        <property type="entry name" value="BACTERIAL_PQQ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51007">
        <property type="entry name" value="CYTC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 14" id="KW-0106">Calcium</keyword>
    <keyword evidence="11 15" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="4 13 16" id="KW-0349">Heme</keyword>
    <keyword evidence="10 14 16" id="KW-0408">Iron</keyword>
    <keyword evidence="5 14 16" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9 19" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="8 13" id="KW-0634">PQQ</keyword>
    <keyword evidence="20" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 17" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="17">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809635" evidence="17">
        <location>
            <begin position="21"/>
            <end position="703"/>
        </location>
    </feature>
    <feature type="domain" description="Cytochrome c" evidence="18">
        <location>
            <begin position="612"/>
            <end position="691"/>
        </location>
    </feature>
    <feature type="region of interest" description="Pyrroloquinoline quinone binding" evidence="13">
        <location>
            <begin position="204"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="region of interest" description="Pyrroloquinoline quinone binding" evidence="13">
        <location>
            <begin position="415"/>
            <end position="416"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="12">
        <location>
            <position position="329"/>
        </location>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="143"/>
        </location>
        <ligand>
            <name>pyrroloquinoline quinone</name>
            <dbReference type="ChEBI" id="CHEBI:58442"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="188"/>
        </location>
        <ligand>
            <name>pyrroloquinoline quinone</name>
            <dbReference type="ChEBI" id="CHEBI:58442"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="206"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="264"/>
        </location>
        <ligand>
            <name>pyrroloquinoline quinone</name>
            <dbReference type="ChEBI" id="CHEBI:58442"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="284"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="329"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="356"/>
        </location>
        <ligand>
            <name>pyrroloquinoline quinone</name>
            <dbReference type="ChEBI" id="CHEBI:58442"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="565"/>
        </location>
        <ligand>
            <name>pyrroloquinoline quinone</name>
            <dbReference type="ChEBI" id="CHEBI:58442"/>
        </ligand>
    </feature>
    <feature type="binding site" description="covalent" evidence="13">
        <location>
            <position position="625"/>
        </location>
        <ligand>
            <name>heme c</name>
            <dbReference type="ChEBI" id="CHEBI:61717"/>
        </ligand>
    </feature>
    <feature type="binding site" description="covalent" evidence="13">
        <location>
            <position position="628"/>
        </location>
        <ligand>
            <name>heme c</name>
            <dbReference type="ChEBI" id="CHEBI:61717"/>
        </ligand>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="14">
        <location>
            <position position="629"/>
        </location>
        <ligand>
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="14">
        <location>
            <position position="668"/>
        </location>
        <ligand>
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <feature type="disulfide bond" evidence="15">
        <location>
            <begin position="137"/>
            <end position="138"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001913"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008156"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022891"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRSR" id="PIRSR617512-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="PIRSR" id="PIRSR617512-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="PIRSR" id="PIRSR617512-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="PIRSR" id="PIRSR617512-4"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00433"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="18">
        <source>
            <dbReference type="PROSITE" id="PS51007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="EMBL" id="CTQ76236.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="703" mass="75954" checksum="181A984CFFA6F7D8" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APD4</accession>
    <name>A0A0M7APD4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Toxin CcdB</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">Cytotoxic protein CcdB</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="3">Protein LetD</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">LAX5112_04250</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the CcdB toxin family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75474.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673484.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000021.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04250"/>
    <dbReference type="EnsemblBacteria" id="CTQ75474">
        <property type="protein sequence ID" value="CTQ75474"/>
        <property type="gene ID" value="LAX5112_04250"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008657">
        <property type="term" value="F:DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) inhibitor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006276">
        <property type="term" value="P:plasmid maintenance"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002712">
        <property type="entry name" value="CcdB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011067">
        <property type="entry name" value="Plasmid_toxin/cell-grow_inhib"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01845">
        <property type="entry name" value="CcdB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005230"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00015075"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00029628"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00033135"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ75474.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="102" mass="11549" checksum="EB29FF1E69962FED" modified="2015-12-09" version="1">MARNKIYRPKSGDVLVLDVQADLLDDLNTRVLVSLMPESEAPTPARFLNQVFMINGAVHVMVMQFLSAVPVKELSEHIGSLDGRQSDITRALDMLFQGFWFW</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APJ0</accession>
    <name>A0A0M7APJ0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Fructose-bisphosphate aldolase</fullName>
            <ecNumber evidence="5">4.1.2.13</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">fba</name>
        <name evidence="5" type="ORF">LAX5112_04566</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="4">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="4">Binds 2 Zn(2+) ions per subunit. One is catalytic and the other provides a structural contribution.</text>
    </comment>
    <comment type="pathway">
        <text evidence="1">Carbohydrate biosynthesis; Calvin cycle.</text>
    </comment>
    <dbReference type="EC" id="4.1.2.13" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000026">
        <property type="protein sequence ID" value="CTQ76352.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673760.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000026.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04566"/>
    <dbReference type="EnsemblBacteria" id="CTQ76352">
        <property type="protein sequence ID" value="CTQ76352"/>
        <property type="gene ID" value="LAX5112_04566"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00116"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004332">
        <property type="term" value="F:fructose-bisphosphate aldolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019253">
        <property type="term" value="P:reductive pentose-phosphate cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000771">
        <property type="entry name" value="FBA_II"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01116">
        <property type="entry name" value="F_bP_aldolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001359">
        <property type="entry name" value="F_bP_aldolase_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0113">Calvin cycle</keyword>
    <keyword evidence="5" id="KW-0456">Lyase</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <feature type="active site" description="Proton donor" evidence="3">
        <location>
            <position position="82"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="83"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>1</label>
            <note>catalytic</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="104"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="134"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="174"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>1</label>
            <note>catalytic</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="202"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>1</label>
            <note>catalytic</note>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005215"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022567"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR001359-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR001359-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ76352.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="283" mass="30035" checksum="DFFC98D9E4FE45AA" modified="2015-12-09" version="1">MTLATLSQVLQPALNGGYAVAGLVTLGWEDMRAYVAAAEEEGVAVILQAGPSCRKHTPLPVLGAMFRHLAEGSTVPVVAHLDHGYTYEECQEALDSGFTSLMYDGSRKPLSQNIDETARIAELAQSAGISCEGEIGFVGYAHGAASEGTDPVDAEKFAADSGVDAMAISVGNVHLQENKEGGLDEARISAIQARTTVPLVIHGGSGVPVEQRQKLARTTNICKFNIGTELRKAFGTAMRDAVNRDPDRFDRVTILSETHDPMVAATRTVLKAFGGPSKNEPKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APL2</accession>
    <name>A0A0M7APL2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04572</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000026">
        <property type="protein sequence ID" value="CTQ76372.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673766.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000026.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04572"/>
    <dbReference type="EnsemblBacteria" id="CTQ76372">
        <property type="protein sequence ID" value="CTQ76372"/>
        <property type="gene ID" value="LAX5112_04572"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009569">
        <property type="entry name" value="AA_synth_put"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035936">
        <property type="entry name" value="BB2672"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06684">
        <property type="entry name" value="AA_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF160519">
        <property type="entry name" value="SSF160519"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ76372.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="199" mass="21799" checksum="D86E65E6A9C6A30D" modified="2015-12-09" version="1">MQPEIRKIVAYEEEILIEGFRVTEQPWHVFAAAAVVKNPWSGRFVEDLKPEILAFGPVLGEVLTDRILKLGGNGEAIEAYGKAAVVGLDGEIEHASGLIHTLRFGNFYREAVGAKSYLAFSNTRGPANAPIMIPLMDKNDAGRRSHYLTIQFSIPDAPRADEVVVALGGATSGRPFHRIGDRYQDLKEMGRDLDNPAAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQ04</accession>
    <name>A0A0M7AQ04_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_04689</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000028">
        <property type="protein sequence ID" value="CTQ76727.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04689"/>
    <dbReference type="EnsemblBacteria" id="CTQ76727">
        <property type="protein sequence ID" value="CTQ76727"/>
        <property type="gene ID" value="LAX5112_04689"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017039">
        <property type="entry name" value="Virul_fac_BrkB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30213">
        <property type="entry name" value="PTHR30213"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03631">
        <property type="entry name" value="Virul_fac_BrkB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF035875">
        <property type="entry name" value="RNase_BN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00765">
        <property type="entry name" value="yihY_not_rbn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="43"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="105"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="148"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="192"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="224"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="256"/>
            <end position="278"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ76727.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="303" mass="33678" checksum="55DAA6EAA292E761" modified="2015-12-09" version="1">MVSSFGHIDCKMGGHDLRCFWRCLKAAFYQFNASDGWAISSHIALSLMMAVFPFLIFATSLAGFFGSAERSKDIVNLVFEYWPDEIAEPIIREVNVVLGQGHTGFATLGILLALVFASNGIEAVRIALNRAYKIEDRRTFWQQRLQSLVFVLCGSALLFLVSALLVFLPLYFSFIADASPTLHASLFASGTLRFSSAIAILVFVVFSCHYWLPARTQRLQKIWPGIAVTLVLWTIAALVFSAYLKMFANYSATYAGLAGVMTAQIFLYIMGAILIYGAEFNAALEWMTETELATESHIEEPVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQF5</accession>
    <name>A0A0M7AQF5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">PHB_depo_C domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">rpsB_2</name>
        <name evidence="2" type="ORF">LAX5112_04816</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000031">
        <property type="protein sequence ID" value="CTQ77139.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04816"/>
    <dbReference type="EnsemblBacteria" id="CTQ77139">
        <property type="protein sequence ID" value="CTQ77139"/>
        <property type="gene ID" value="LAX5112_04816"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009656">
        <property type="entry name" value="PHB_depo_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010915">
        <property type="entry name" value="PHB_depoly_PhaZ"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06850">
        <property type="entry name" value="PHB_depo_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01849">
        <property type="entry name" value="PHB_depoly_PhaZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PHB_depo_C" evidence="1">
        <location>
            <begin position="226"/>
            <end position="427"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF06850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77139.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="539" mass="59843" checksum="13CF80A6AE61D0A8" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQJ9</accession>
    <name>A0A0M7AQJ9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04623</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000027">
        <property type="protein sequence ID" value="CTQ76530.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673810.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000027.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76530">
        <property type="protein sequence ID" value="CTQ76530"/>
        <property type="gene ID" value="LAX5112_04623"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="49"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="79"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="116"/>
            <end position="134"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76530.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="147" mass="15686" checksum="FAC37EB0CF8EA0EE" modified="2015-12-09" version="1">MAIPRYISFVAFTLGTYDMVRGVAHTIFAGYAATHLAGVDLKGPAGRDLLVLMVAFGASNLVTACALIYLALTDRAGSLVLLILIPIAYLAAHIGLQMHEIGLTGQGVFPGQFNMTVYLTICVVSATSGLLSVWRQMRSAVHFGRSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQW0</accession>
    <name>A0A0M7AQW0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_04504</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000025">
        <property type="protein sequence ID" value="CTQ76183.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04504"/>
    <dbReference type="EnsemblBacteria" id="CTQ76183">
        <property type="protein sequence ID" value="CTQ76183"/>
        <property type="gene ID" value="LAX5112_04504"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_repeat"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="SSF48452"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50005">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0802">TPR repeat</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809595" evidence="2">
        <location>
            <begin position="27"/>
            <end position="455"/>
        </location>
    </feature>
    <feature type="repeat" description="TPR" evidence="1">
        <location>
            <begin position="60"/>
            <end position="93"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00339"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ76183.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="455" mass="50404" checksum="B2EF190FA78E94A8" modified="2015-12-09" version="1">MHLTSDTIFCLVIMAGLLFSSAVAEAQEADIGGQPEVSADALLARQTVLLAKMLERPADLDIAFEYATVSVMVGDYEAAISTFERMLIFAPNLPRVKLELGVLYYRLGSFETARYYFQSTLETPNVPEEVQQRVETYLSAIASKQQPTQFRADVIIGARYQSNANAAPGGRRVTLNGRDFILDDTATGQADINAFVAGRAYGSYDLGTQGDLIETDVVFYAARFADQVRLDTGLAEITLGPSFNMARFNFDDVQLGIYGVASGVRLNHANYNGALGVGTRLVARPDIQTEINAKLEWRQRWFNDTSDYPTVSDRNGYFVQFASKISRQLTKGLQMRVLALADFEETRIKSQQSWEAGGGVGATYQFASPVKQLPHLWSIDLEAGYIYRAYDEPDPLVNAAVKQRDHEGWLRAALNVPLKYNVSAGLVGEVRRQNSNYDLSSYSNVSAMFSLRKAF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AR19</accession>
    <name>A0A0M7AR19_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Peptidase M15</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04801</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000031">
        <property type="protein sequence ID" value="CTQ77097.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451210.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000031.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04801"/>
    <dbReference type="EnsemblBacteria" id="CTQ77097">
        <property type="protein sequence ID" value="CTQ77097"/>
        <property type="gene ID" value="LAX5112_04801"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1380.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009045">
        <property type="entry name" value="Hedgehog_sig/DD-Pept_Zn-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013230">
        <property type="entry name" value="Peptidase_M15A_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08291">
        <property type="entry name" value="Peptidase_M15_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55166">
        <property type="entry name" value="SSF55166"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidase_M15_3" evidence="1">
        <location>
            <begin position="50"/>
            <end position="131"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08291"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77097.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="138" mass="15390" checksum="42421BCF0EE58EF3" modified="2015-12-09" version="1">MRQRFLAWIMFLGLSVVLVGCGSVAGVTGMGWATASHSAIDYNDSAWCVPRKLKKVLNKVAKRYGPVKVNSTKRWWFENWRKGGAKNSYHLNCQAVDFSVGGNPSSVLAFLKSQSAVGGYKYYSSGFYHIDTGPRRTW</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARC3</accession>
    <name>A0A0M7ARC3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_05017</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000041">
        <property type="protein sequence ID" value="CTQ77695.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77695">
        <property type="protein sequence ID" value="CTQ77695"/>
        <property type="gene ID" value="LAX5112_05017"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="81"/>
            <end position="105"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77695.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="105" mass="12028" checksum="2CBFB8DA71D6FADC" modified="2015-12-09" version="1">MKRDLDINMVDGVPWGFICGRITARKPDVACRKTNQRPQTDRHITADFDLSFESFGQGVGCDGGSKSTCKWRIQNRCDQHDADEEHEHPCKKGSFQVQREHGRRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ATF8</accession>
    <name>A0A0M7ATF8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">G protein</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">GPG</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_05038</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the microvirus G protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000045">
        <property type="protein sequence ID" value="CTQ77742.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_000487867.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000045.1"/>
    </dbReference>
    <dbReference type="SMR" id="A0A0M7ATF8"/>
    <dbReference type="STRING" id="388408.LAX5112_05038"/>
    <dbReference type="EnsemblBacteria" id="CTQ77742">
        <property type="protein sequence ID" value="CTQ77742"/>
        <property type="gene ID" value="LAX5112_05038"/>
    </dbReference>
    <dbReference type="GeneID" id="39482437"/>
    <dbReference type="GeneID" id="55495994"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019048">
        <property type="term" value="P:modulation by virus of host process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016184">
        <property type="entry name" value="Capsid/spike_ssDNA_virus"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003515">
        <property type="entry name" value="Spike_G"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029053">
        <property type="entry name" value="Viral_coat"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02306">
        <property type="entry name" value="Phage_G"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004159">
        <property type="entry name" value="Spike_G"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88645">
        <property type="entry name" value="SSF88645"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007826"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00032851"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00032966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ77742.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="175" mass="19048" checksum="AA2AF62D82666076" modified="2015-12-09" version="1">MFQTFISRHNSNFFSDKLVLTSVTPASSAPVLQTPKATSSTLYFDSLTVNAGNGGFLHCIQMDTSVNAANQVVSVGADIAFDADPKFFACLVRFESSSVPTTLPTAYDVYPLDGRHDGGYYTVKDCVTIDVLPRTPGNNVYVGFMVWSNFTATKCRGLVSLNQVIKEIICLQPLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AUJ5</accession>
    <name>A0A0M7AUJ5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Multidrug resistance protein MdtN</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04856</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000033">
        <property type="protein sequence ID" value="CTQ77274.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674004.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000033.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77274">
        <property type="protein sequence ID" value="CTQ77274"/>
        <property type="gene ID" value="LAX5112_04856"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="136"/>
            <end position="159"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77274.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="506" mass="55812" checksum="EA0D10DC4CC09244" modified="2015-12-09" version="1">MRVTLGDQTFDAADWGLGGCRISGLSAPLPEVGSGHILLCTLPFQGFNITLKASAEVVRSSENTKEVAFRFIDLGERETALMQHFVEDLVRGKMTDVTDTIVRIDTPVTPVPTKPDPNPAQEIPVRRWPIKQIVMTLFYFVLGIAVFGYVGIYVFATLFRLEISTAVVSAERYEVTAPATGRLTGLNLRTGDMAAAGVPIAFIENDALISEIRKAETALMQAQVELSEHKLYLQVEADRENGYSLVAANDLRQARAETVTLDLAVETARDRLDRYETLFEQGYLKRDVLATAQLELATAKSALEKHIIHVAELEKLGAEGGNFGILNGDKFSGLKSERIAEVARWQQEVDYRKKLLEELRAQPDMMPVTLGSNAAVVDVIAADGQTLKAGAPLVVLEESDHRVITAFLTQEEITQVRKGSPARIYVPAEDRWIEATVDMISRTDGFIDETTQMHRFRAPDARSAKVDLIAKDGALPQSGTPVTVYFERYRANKVLRLISGYIGDAT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AUR8</accession>
    <name>A0A0M7AUR8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Tyrosine-protein phosphatase</fullName>
            <ecNumber evidence="3">3.1.3.48</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">iphP</name>
        <name evidence="3" type="ORF">LAX5112_04941</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.3.48" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000036">
        <property type="protein sequence ID" value="CTQ77533.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04941"/>
    <dbReference type="EnsemblBacteria" id="CTQ77533">
        <property type="protein sequence ID" value="CTQ77533"/>
        <property type="gene ID" value="LAX5112_04941"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004725">
        <property type="term" value="F:protein tyrosine phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016311">
        <property type="term" value="P:dephosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.190.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029021">
        <property type="entry name" value="Prot-tyrosine_phosphatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026893">
        <property type="entry name" value="Tyr/Ser_Pase_IphP-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016130">
        <property type="entry name" value="Tyr_Pase_AS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13350">
        <property type="entry name" value="Y_phosphatase3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52799">
        <property type="entry name" value="SSF52799"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00383">
        <property type="entry name" value="TYR_PHOSPHATASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809614" evidence="2">
        <location>
            <begin position="24"/>
            <end position="292"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="25"/>
            <end position="45"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ77533.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="292" mass="32197" checksum="4FFBB4E9C7F167A4" modified="2015-12-09" version="1">MTLKRAWSAFPVVLLVACSVASAEPAPKHGLEGQPNFRDLGGYQTSDGQTLRTGLVFRSGELPRTTDADLETLKDLGVKTVVNFLTEGEIEYRGPDRLPEGVREISLPITGDIGGIPDAANMLVEARKTGDFRRFPPEFNPQVHEELVNGTADDQYAALFDILADETNYPVVFHCSHGIHRTGTAAALLLTALGVPWETVREDYLRSNETRAVEVTPRIEQLKSLAMDIEMPANERAQNDAAIEAFYVLEPAYIDASRKEAKKRYGSLNAYIEKGLNQSEGDLDHLQSLLLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZLM0</accession>
    <name>A0A0M6ZLM0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Pyrroline-5-carboxylate reductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00025</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63665.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00025"/>
    <dbReference type="EnsemblBacteria" id="CTQ63665">
        <property type="protein sequence ID" value="CTQ63665"/>
        <property type="gene ID" value="LAX5112_00025"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028939">
        <property type="entry name" value="P5C_Rdtase_cat_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03807">
        <property type="entry name" value="F420_oxidored"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="F420_oxidored" evidence="1">
        <location>
            <begin position="3"/>
            <end position="92"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03807"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ63665.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="214" mass="22797" checksum="1839992612B30407" modified="2015-12-09" version="1">MNIGFIGAGGMAKALAGKWAAKHEVMLSGRDLDKTQDAAASLGVRAGTAQEATRFGDVIVLATRWEDVFSAIENAGGPAAFEGKTVIDINNPVSIETFRTTRENGGSLTQAIADALPGSKVAKAFNMAQVAVWEDPDMIYDGRQLVTLYTSDEEIEETVAGLIADVGSEPLRLGSNAHAYQLEAAAAIVIKFLFAGRDPHTVFNFIQPEVKAIW</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZN35</accession>
    <name>A0A0M6ZN35_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Cyclic di-GMP phosphodiesterase response regulator RpfG</fullName>
            <ecNumber evidence="2">3.1.4.52</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">rpfG_1</name>
        <name evidence="2" type="ORF">LAX5112_00055</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.4.52" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63757.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670113.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00055"/>
    <dbReference type="EnsemblBacteria" id="CTQ63757">
        <property type="protein sequence ID" value="CTQ63757"/>
        <property type="gene ID" value="LAX5112_00055"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071111">
        <property type="term" value="F:cyclic-guanylate-specific phosphodiesterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd00077">
        <property type="entry name" value="HDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003607">
        <property type="entry name" value="HD/PDEase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006674">
        <property type="entry name" value="HD_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037522">
        <property type="entry name" value="HD_GYP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006675">
        <property type="entry name" value="HDIG_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01966">
        <property type="entry name" value="HD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00471">
        <property type="entry name" value="HDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00277">
        <property type="entry name" value="HDIG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51832">
        <property type="entry name" value="HD_GYP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HD-GYP" evidence="1">
        <location>
            <begin position="261"/>
            <end position="453"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51832"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ63757.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="453" mass="50010" checksum="A209796B16663228" modified="2015-12-09" version="1">MPSENTSKIRLAELFGALSHALDITEGQPRGHCVRCCWIGIHIGRQIGLPEAELSDLYYTLLLKDLGCSSNAARICELYLTDDLTFKRDFKTIGTSLPAALRFVLSHTGLKHGFAERVRAIVNILQNGGDIATEMIETRCQRGADIARQMHFSQPVVDAIYSLDEHWNGQGRPNGLKQADIPLFSQIALLAQVIDVFQINAGKDSALIEIRERSGSWFDPALVAAAETAASETGFWDTLQSDDLETTVYGLEPAQNVRFTDDDQLDDIALGFAQVIDSKSPYTAGHSERVTLYSDMIAEELGYSARDRQLLRRAALLHDIGKLGVSNSILDKPGKLDDLEWQAVRLHPVFTDEILRRMDAFKDLAPIGRGHHEKLDGRGYPDGLTASRISMETRIVTMADIFDALTAERPYRAAMPLAKALGILESDVGSSLDSTCFEALKRATQRMDGYKAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPG2</accession>
    <name>A0A0M6ZPG2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Sporulation related domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_00166</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64066.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670181.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00166"/>
    <dbReference type="EnsemblBacteria" id="CTQ64066">
        <property type="protein sequence ID" value="CTQ64066"/>
        <property type="gene ID" value="LAX5112_00166"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042834">
        <property type="term" value="F:peptidoglycan binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1070">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007730">
        <property type="entry name" value="SPOR-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036680">
        <property type="entry name" value="SPOR-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05036">
        <property type="entry name" value="SPOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51724">
        <property type="entry name" value="SPOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SPOR" evidence="2">
        <location>
            <begin position="776"/>
            <end position="860"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="61"/>
            <end position="198"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="228"/>
            <end position="442"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="585"/>
            <end position="616"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="633"/>
            <end position="774"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="92"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="129"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="258"/>
            <end position="292"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="363"/>
            <end position="384"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="390"/>
            <end position="405"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="406"/>
            <end position="423"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="671"/>
            <end position="695"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="740"/>
            <end position="774"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51724"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ64066.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="860" mass="88351" checksum="4A4233FF58127711" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPK4</accession>
    <name>A0A0M6ZPK4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Quercetin 2,3-dioxygenase</fullName>
            <ecNumber evidence="5">1.13.11.24</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">yhhW_1</name>
        <name evidence="5" type="ORF">LAX5112_00365</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the pirin family.</text>
    </comment>
    <dbReference type="EC" id="1.13.11.24" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64685.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670352.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00365"/>
    <dbReference type="EnsemblBacteria" id="CTQ64685">
        <property type="protein sequence ID" value="CTQ64685"/>
        <property type="gene ID" value="LAX5112_00365"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008127">
        <property type="term" value="F:quercetin 2,3-dioxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012093">
        <property type="entry name" value="Pirin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003829">
        <property type="entry name" value="Pirin_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041602">
        <property type="entry name" value="Quercetinase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43212">
        <property type="entry name" value="PTHR43212"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02678">
        <property type="entry name" value="Pirin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17954">
        <property type="entry name" value="Pirin_C_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006232">
        <property type="entry name" value="Pirin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0223">Dioxygenase</keyword>
    <keyword evidence="5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Pirin" evidence="3">
        <location>
            <begin position="16"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="domain" description="Pirin_C_2" evidence="4">
        <location>
            <begin position="147"/>
            <end position="232"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008416"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU003457"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF02678"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF17954"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ64685.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="234" mass="25596" checksum="93EA4E2126AA8F3C" modified="2015-12-09" version="1">MSQIYRASDARGDADFGWLKSKHTFSFGSYFDPNYIGFGALRVINEDRVAPSAGFPTHPHENMEIISYVVSGGLEHKDSIGTGSVIRPGELQRMTAGTGVRHSEYNASDTDPVHFLQIWIVPEQDGLAPSYDQKTFPIEERQNALRLIGSRDGREGSLVIHQDLDLYGSLLSADRSLAFDTRPGRKVWLQVVKGALSVNGQQLNAGDGLGVLEQGALSLSAKQDSEFLLFDLAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="31" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPX4</accession>
    <name>A0A0M6ZPX4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Betaine aldehyde dehydrogenase</fullName>
            <shortName evidence="6">BADH</shortName>
            <ecNumber evidence="6">1.2.1.8</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">betB_1</name>
        <name evidence="6" type="synonym">betB</name>
        <name evidence="11" type="ORF">LAX5112_00409</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the irreversible oxidation of betaine aldehyde to the corresponding acid.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>betaine aldehyde + H2O + NAD(+) = glycine betaine + 2 H(+) + NADH</text>
            <dbReference type="Rhea" id="RHEA:15305"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15710"/>
            <dbReference type="ChEBI" id="CHEBI:17750"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="EC" id="1.2.1.8"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </cofactor>
        <text evidence="6">Binds 2 potassium ions per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="6">Amine and polyamine biosynthesis; betaine biosynthesis via choline pathway; betaine from betaine aldehyde: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Dimer of dimers.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6 9">Belongs to the aldehyde dehydrogenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="1.2.1.8" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64805.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670382.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ64805">
        <property type="protein sequence ID" value="CTQ64805"/>
        <property type="gene ID" value="LAX5112_00409"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00529">
        <property type="reaction ID" value="UER00386"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008802">
        <property type="term" value="F:betaine-aldehyde dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019285">
        <property type="term" value="P:glycine betaine biosynthetic process from choline"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.309.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.605.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00804">
        <property type="entry name" value="BADH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016161">
        <property type="entry name" value="Ald_DH/histidinol_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016163">
        <property type="entry name" value="Ald_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016160">
        <property type="entry name" value="Ald_DH_CS_CYS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029510">
        <property type="entry name" value="Ald_DH_CS_GLU"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016162">
        <property type="entry name" value="Ald_DH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015590">
        <property type="entry name" value="Aldehyde_DH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011264">
        <property type="entry name" value="BADH"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00171">
        <property type="entry name" value="Aldedh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53720">
        <property type="entry name" value="SSF53720"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01804">
        <property type="entry name" value="BADH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00070">
        <property type="entry name" value="ALDEHYDE_DEHYDR_CYS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00687">
        <property type="entry name" value="ALDEHYDE_DEHYDR_GLU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4 6" id="KW-0520">NAD</keyword>
    <keyword evidence="1 6" id="KW-0521">NADP</keyword>
    <keyword evidence="5 6" id="KW-0558">Oxidation</keyword>
    <keyword evidence="3 6 9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2 6" id="KW-0630">Potassium</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aldedh" evidence="10">
        <location>
            <begin position="15"/>
            <end position="476"/>
        </location>
    </feature>
    <feature type="active site" description="Charge relay system" evidence="6">
        <location>
            <position position="161"/>
        </location>
    </feature>
    <feature type="active site" evidence="7">
        <location>
            <position position="249"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="6">
        <location>
            <position position="249"/>
        </location>
    </feature>
    <feature type="active site" evidence="8">
        <location>
            <position position="283"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="6">
        <location>
            <position position="283"/>
        </location>
    </feature>
    <feature type="active site" description="Charge relay system" evidence="6">
        <location>
            <position position="461"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="26"/>
        </location>
        <ligand>
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="93"/>
        </location>
        <ligand>
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="149"/>
            <end position="151"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="175"/>
            <end position="178"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="243"/>
        </location>
        <ligand>
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="251"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" description="covalent" evidence="6">
        <location>
            <position position="283"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="384"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="454"/>
        </location>
        <ligand>
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="457"/>
        </location>
        <ligand>
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="modified residue" description="Cysteine sulfenic acid (-SOH)" evidence="6">
        <location>
            <position position="283"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022958"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023097"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00804"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU003345"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF00171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ64805.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="487" mass="51718" checksum="8E4543CD4CFA7FD4" modified="2015-12-09" version="1">MRAQPKASHYIGGAYTESQSGTPFDSLYPATGEIIAQIHPADDAIIAAAISAAKEGQKVWAATPPAERGRVLRRAAEILREKNHELSVLETLDTGKPLQETLIADAASGADCLEYYGGLAATLTGEHIDLGGSFAYTKREPLGICFGIGAWNYPIQIACWKAAPALVCGNAMIFKPSEVTPLSALKLAEALMEAGLPAGVFNVIQGFGDIGAKMVAHPDIAKVSLTGSVPTGAKVAALAGEHLKKTTLELGGKSPLIIFDDADIENAISAAINANFYSTGQICSNGTRVFVHTSIKEQFLKRLAERTGDAVLGDPLDEATSIGPLVSKAQLDKVLSYMQIGQDEGARLVCGGSAAKVDSLPDGFFVQPTVFADVNDNMRIAQEEIFGPVLSVLDFDDEDDVIARANDTEFGLAAGVFTKDIQRAHRVIDQLQAGTCWINTYNLTPIEMPFGGYKKSGMGRENGHAAIEYYSQIKSVYVEMGGVEAAF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQ33</accession>
    <name>A0A0M6ZQ33_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 8">Pyruvate dehydrogenase E1 component subunit alpha</fullName>
            <ecNumber evidence="3 8">1.2.4.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">acoA_1</name>
        <name evidence="8" type="synonym">pdhA</name>
        <name evidence="11" type="ORF">LAX5112_00225</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7 8">
            <text>(R)-N(6)-lipoyl-L-lysyl-[dihydrolipoyllysine-residue acetyltransferase] + H(+) + pyruvate = (R)-N(6)-(S(8)-acetyldihydrolipoyl)-L-lysyl-[dihydrolipoyllysine-residue acetyltransferase] + CO2</text>
            <dbReference type="Rhea" id="RHEA:19189"/>
            <dbReference type="Rhea" id="RHEA-COMP:10480"/>
            <dbReference type="Rhea" id="RHEA-COMP:10481"/>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:83099"/>
            <dbReference type="ChEBI" id="CHEBI:83111"/>
            <dbReference type="EC" id="1.2.4.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 8">
            <name>thiamine diphosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58937"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="2 8">Heterodimer of an alpha and a beta chain.</text>
    </comment>
    <dbReference type="EC" id="1.2.4.1" evidence="3 8"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64230.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670221.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00225"/>
    <dbReference type="EnsemblBacteria" id="CTQ64230">
        <property type="protein sequence ID" value="CTQ64230"/>
        <property type="gene ID" value="LAX5112_00225"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043231">
        <property type="term" value="C:intracellular membrane-bounded organelle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004739">
        <property type="term" value="F:pyruvate dehydrogenase (acetyl-transferring) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006086">
        <property type="term" value="P:acetyl-CoA biosynthetic process from pyruvate"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001017">
        <property type="entry name" value="DH_E1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017597">
        <property type="entry name" value="Pyrv_DH_E1_asu_subgrp-y"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029061">
        <property type="entry name" value="THDP-binding"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00676">
        <property type="entry name" value="E1_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52518">
        <property type="entry name" value="SSF52518"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03182">
        <property type="entry name" value="PDH_E1_alph_y"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5 8 11" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6 8" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0786">Thiamine pyrophosphate</keyword>
    <feature type="domain" description="E1_dh" evidence="10">
        <location>
            <begin position="39"/>
            <end position="336"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001964"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011870"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012281"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00014159"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023317"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00033635"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU361139"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF00676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ64230.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="345" mass="38289" checksum="025E62304ADBCDAF" modified="2015-12-09" version="1">MAAAKKTSAGTSRTRSSAKKAEPAIAEFTKEEELHAYREMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGMQMAKIDGDQMITAYRDHGHMLAMDLDPKGVMAELTGRRGGLSKGKGGSMHMFSKEKHFYGGHGIVGAQVSLGTGLGFANKYRENGNVCMTFFGDGASNQGQVYESFNMAELWKLPVIYVIENNKYGMGTSVERSSSMTDLSQRGASFNIPGEKVDGMDVRAVMAASKKALEWCRDGKGPYILEMVTYRYRGHSMSDPAKYRSKDEVQKMRTEHDPIEQVRKRLLDNKWATEDDLKGLDKDIRARVAEAAEFAQTDPEPDASELYTDILL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQ52</accession>
    <name>A0A0M6ZQ52_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="17">Nitrite reductase [NAD(P)H]</fullName>
            <ecNumber evidence="17">1.7.1.4</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="17" type="primary">nasD</name>
        <name evidence="17" type="ORF">LAX5112_00435</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="18" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="18">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 11">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="2">Nitrogen metabolism; nitrate reduction (assimilation).</text>
    </comment>
    <dbReference type="EC" id="1.7.1.4" evidence="17"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64885.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670542.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00435"/>
    <dbReference type="EnsemblBacteria" id="CTQ64885">
        <property type="protein sequence ID" value="CTQ64885"/>
        <property type="gene ID" value="LAX5112_00435"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00653"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050661">
        <property type="term" value="F:NADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008942">
        <property type="term" value="F:nitrite reductase [NAD(P)H] activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042128">
        <property type="term" value="P:nitrate assimilation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.1100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.390.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.413.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007419">
        <property type="entry name" value="BFD-like_2Fe2S-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041854">
        <property type="entry name" value="BFD-like_2Fe2S-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023753">
        <property type="entry name" value="FAD/NAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016156">
        <property type="entry name" value="FAD/NAD-linked_Rdtase_dimer_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005117">
        <property type="entry name" value="NiRdtase/SiRdtase_haem-b_fer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036136">
        <property type="entry name" value="Nit/Sulf_reduc_fer-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012744">
        <property type="entry name" value="Nitri_red_NirB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017121">
        <property type="entry name" value="Nitrite_Rdtase_lsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006067">
        <property type="entry name" value="NO2/SO3_Rdtase_4Fe4S_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045854">
        <property type="entry name" value="NO2/SO3_Rdtase_4Fe4S_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006066">
        <property type="entry name" value="NO2/SO3_Rdtase_FeS/sirohaem_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041575">
        <property type="entry name" value="Rubredoxin_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04324">
        <property type="entry name" value="Fer2_BFD"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01077">
        <property type="entry name" value="NIR_SIR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03460">
        <property type="entry name" value="NIR_SIR_ferr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07992">
        <property type="entry name" value="Pyr_redox_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18267">
        <property type="entry name" value="Rubredoxin_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF037149">
        <property type="entry name" value="NirB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00397">
        <property type="entry name" value="SIROHAEM"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55124">
        <property type="entry name" value="SSF55124"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56014">
        <property type="entry name" value="SSF56014"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02374">
        <property type="entry name" value="nitri_red_nirB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00365">
        <property type="entry name" value="NIR_SIR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="6 11" id="KW-0274">FAD</keyword>
    <keyword evidence="5 11" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="4" id="KW-0349">Heme</keyword>
    <keyword evidence="8" id="KW-0408">Iron</keyword>
    <keyword evidence="9" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10 11" id="KW-0534">Nitrate assimilation</keyword>
    <keyword evidence="7 17" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Pyr_redox_2" evidence="15">
        <location>
            <begin position="5"/>
            <end position="281"/>
        </location>
    </feature>
    <feature type="domain" description="Rubredoxin_C" evidence="16">
        <location>
            <begin position="318"/>
            <end position="386"/>
        </location>
    </feature>
    <feature type="domain" description="Fer2_BFD" evidence="14">
        <location>
            <begin position="422"/>
            <end position="469"/>
        </location>
    </feature>
    <feature type="domain" description="Fer2_BFD" evidence="14">
        <location>
            <begin position="485"/>
            <end position="534"/>
        </location>
    </feature>
    <feature type="domain" description="NIR_SIR_ferr" evidence="13">
        <location>
            <begin position="560"/>
            <end position="623"/>
        </location>
    </feature>
    <feature type="domain" description="NIR_SIR" evidence="12">
        <location>
            <begin position="634"/>
            <end position="772"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005096"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023063"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRNR" id="PIRNR037149"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF01077"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF03460"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF04324"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="Pfam" id="PF07992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="Pfam" id="PF18267"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="CTQ64885.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="817" mass="88968" checksum="B32FE1840EFEE32C" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQ97</accession>
    <name>A0A0M6ZQ97_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00457</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64949.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670545.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00457"/>
    <dbReference type="EnsemblBacteria" id="CTQ64949">
        <property type="protein sequence ID" value="CTQ64949"/>
        <property type="gene ID" value="LAX5112_00457"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023811">
        <property type="entry name" value="CHP04076"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR04076">
        <property type="entry name" value="TIGR04076"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="114"/>
            <end position="136"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64949.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="136" mass="15289" checksum="7FADCAF9DE861B59" modified="2015-12-09" version="1">MAEDLDGTDRFAAVEAGDGFWLYDLKVETVLDGRTPVCRHLEGESFAVEGEALVFQKGQRVSMYALVAVLPLLPAKQRPTSPNDWMSTDAEVACPDPHCGGRFRITRTKKRWFSHSETTGLPDQRSTPYWQKDEAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQE9</accession>
    <name>A0A0M6ZQE9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Putative monovalent cation/H+ antiporter subunit F</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">LAX5112_00470</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the CPA3 antiporters (TC 2.A.63) subunit F family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64985.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00470"/>
    <dbReference type="EnsemblBacteria" id="CTQ64985">
        <property type="protein sequence ID" value="CTQ64985"/>
        <property type="gene ID" value="LAX5112_00470"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015075">
        <property type="term" value="F:ion transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007208">
        <property type="entry name" value="MrpF/PhaF-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34702">
        <property type="entry name" value="PTHR34702"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04066">
        <property type="entry name" value="MrpF_PhaF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="42"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="68"/>
            <end position="90"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009212"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ64985.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="118" mass="12396" checksum="6D67CCB14E49CF21" modified="2015-12-09" version="1">MSIESILGISETLNTVLVLLIIGAFALTALRLMKGPSYADRFVAIDMLTGLAVAACALTALTTGRSEFLDVAFALALIAFVATAAFAAFLERKVAVTDGHFRDNGKQKATKSAQQEAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQG5</accession>
    <name>A0A0M6ZQG5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Maltose-binding periplasmic proteins/domains</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">LAX5112_00482</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the bacterial solute-binding protein 1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65019.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00482"/>
    <dbReference type="EnsemblBacteria" id="CTQ65019">
        <property type="protein sequence ID" value="CTQ65019"/>
        <property type="gene ID" value="LAX5112_00482"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006059">
        <property type="entry name" value="SBP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01547">
        <property type="entry name" value="SBP_bac_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0574">Periplasm</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008520"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ65019.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="584" mass="64549" checksum="372E1BDC19DDC686" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQR3</accession>
    <name>A0A0M6ZQR3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Endonuclease/Exonuclease/phosphatase family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00054</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63753.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670112.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00054"/>
    <dbReference type="EnsemblBacteria" id="CTQ63753">
        <property type="protein sequence ID" value="CTQ63753"/>
        <property type="gene ID" value="LAX5112_00054"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004519">
        <property type="term" value="F:endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004527">
        <property type="term" value="F:exonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036691">
        <property type="entry name" value="Endo/exonu/phosph_ase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005135">
        <property type="entry name" value="Endo/exonuclease/phosphatase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03372">
        <property type="entry name" value="Exo_endo_phos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56219">
        <property type="entry name" value="SSF56219"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="2" id="KW-0269">Exonuclease</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0540">Nuclease</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Endo/exonuclease/phosphatase" evidence="1">
        <location>
            <begin position="5"/>
            <end position="221"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03372"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ63753.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="237" mass="26605" checksum="EE75398031C19602" modified="2015-12-09" version="1">MLKIGSYNIQKSIGVDARRRPDRTLKVIGELQCDVIALQEADKRFGPRESTLNRDHILAQTNFRPVPFAVGEHSLGWHGNAILVRQGIEILDHRRIELPTLEPRGAVAVDLEVEDQKIRVAAMHLSLIGHFRKKQISSLMHQLHEGLDYLPTILIGDLNEWRDDAKSIRLLEKRYEVTTPGRSFPSPLPVGSLDRIITSPEFTVQKAGVHKSKTARIASDHLPVWAELALEPAGHLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQW7</accession>
    <name>A0A0M6ZQW7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Exodeoxyribonuclease 7 large subunit</fullName>
            <ecNumber evidence="5">3.1.11.6</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Exodeoxyribonuclease VII large subunit</fullName>
            <shortName evidence="5">Exonuclease VII large subunit</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5 10" type="primary">xseA</name>
        <name evidence="10" type="ORF">LAX5112_00348</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5 6">
            <text>Exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield nucleoside 5'-phosphates.</text>
            <dbReference type="EC" id="3.1.11.6"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="5">Heterooligomer composed of large and small subunits.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5 6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5 6">Belongs to the XseA family.</text>
    </comment>
    <dbReference type="EC" id="3.1.11.6" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64642.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670533.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00348"/>
    <dbReference type="EnsemblBacteria" id="CTQ64642">
        <property type="protein sequence ID" value="CTQ64642"/>
        <property type="gene ID" value="LAX5112_00348"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009318">
        <property type="term" value="C:exodeoxyribonuclease VII complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008855">
        <property type="term" value="F:exodeoxyribonuclease VII activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006308">
        <property type="term" value="P:DNA catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd04489">
        <property type="entry name" value="ExoVII_LU_OBF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00378">
        <property type="entry name" value="Exonuc_7_L"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003753">
        <property type="entry name" value="Exonuc_VII_L"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020579">
        <property type="entry name" value="Exonuc_VII_lsu_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025824">
        <property type="entry name" value="OB-fold_nuc-bd_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30008">
        <property type="entry name" value="PTHR30008"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02601">
        <property type="entry name" value="Exonuc_VII_L"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13742">
        <property type="entry name" value="tRNA_anti_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00237">
        <property type="entry name" value="xseA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 5 6" id="KW-0269">Exonuclease</keyword>
    <keyword evidence="3 5 6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 5 6" id="KW-0540">Nuclease</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="tRNA_anti_2" evidence="9">
        <location>
            <begin position="11"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="domain" description="Exonuc_VII_L" evidence="8">
        <location>
            <begin position="127"/>
            <end position="489"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="491"/>
            <end position="522"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022839"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00378"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU004355"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF02601"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF13742"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ64642.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="522" mass="56050" checksum="05AFC749BBE52B7B" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZR92</accession>
    <name>A0A0M6ZR92_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Deoxyribose-phosphate aldolase</fullName>
            <ecNumber evidence="2">4.1.2.4</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">2-deoxy-D-ribose 5-phosphate aldolase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="4" type="primary">deoC</name>
        <name evidence="4" type="ORF">LAX5112_00561</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>2-deoxy-D-ribose 5-phosphate = acetaldehyde + D-glyceraldehyde 3-phosphate</text>
            <dbReference type="Rhea" id="RHEA:12821"/>
            <dbReference type="ChEBI" id="CHEBI:15343"/>
            <dbReference type="ChEBI" id="CHEBI:59776"/>
            <dbReference type="ChEBI" id="CHEBI:62877"/>
            <dbReference type="EC" id="4.1.2.4"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="4.1.2.4" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65248.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670496.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00561"/>
    <dbReference type="EnsemblBacteria" id="CTQ65248">
        <property type="protein sequence ID" value="CTQ65248"/>
        <property type="gene ID" value="LAX5112_00561"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004139">
        <property type="term" value="F:deoxyribose-phosphate aldolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009264">
        <property type="term" value="P:deoxyribonucleotide catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00959">
        <property type="entry name" value="DeoC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011343">
        <property type="entry name" value="DeoC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002915">
        <property type="entry name" value="DeoC/FbaB/LacD_aldolase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10889">
        <property type="entry name" value="PTHR10889"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01791">
        <property type="entry name" value="DeoC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001357">
        <property type="entry name" value="DeoC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01133">
        <property type="entry name" value="DeoC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00126">
        <property type="entry name" value="deoC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0456">Lyase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012515"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00032755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ65248.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="258" mass="27028" checksum="98932DE30A4AD538" modified="2015-12-09" version="1">MTDMIETAKRALGLVDLTNLNDDCTAEEITALTNRTVTPYGAVAAVCVWPRFVAQAVRELAGTGVKVATVVNFPAGGEDTQAVVAETRQAIADGADEIDLVMPYRTFVEGRKGFAEEHIIQVKAAIPEPAILKVILETGEIKDPLLIHAASNVAIAAGADFIKTSTGKVAVNATLEAAEIMLTAIEEARRDNAERVIGFKPAGGIKTASDAAAYLALADKIMGHNWVSASTFRFGASGLLDALTATIEGQEAAVGEGY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRN3</accession>
    <name>A0A0M6ZRN3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Segregation and condensation protein A</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">scpA_1</name>
        <name evidence="2" type="ORF">LAX5112_00171</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64083.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670185.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00171"/>
    <dbReference type="EnsemblBacteria" id="CTQ64083">
        <property type="protein sequence ID" value="CTQ64083"/>
        <property type="gene ID" value="LAX5112_00171"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007059">
        <property type="term" value="P:chromosome segregation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003768">
        <property type="entry name" value="ScpA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33969">
        <property type="entry name" value="PTHR33969"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02616">
        <property type="entry name" value="SMC_ScpA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0159">Chromosome partition</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64083.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="279" mass="31699" checksum="3F5F72533E39300B" modified="2015-12-09" version="1">MAEQDTQPVSAPDKSFDLLSAVHTSEERATSDPQLVVDVDGFEGPLDLLLGLARTQKVDLAKISILALVEQYLEFVTEARRMRLELAADYLVMAAWLAYLKSRLLLPEQKDEDEPTGEELAAALAFRLRRLEAMREVSEKLLARSRAGRDVFFRGEPETMSVVHKSIWDASVYDLLSAYATQRQRQSVTSVRVLRRTVWSLQEARELLTKLVGRVSEWTPLNAYLRDYLYDNKDWATVVASSFSASLEMVREGTVEIRQGEPFSPVYIRALEQEPDKDV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZT83</accession>
    <name>A0A0M6ZT83_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Octanoyl-[GcvH]:protein N-octanoyltransferase</fullName>
            <ecNumber evidence="2">2.3.1.204</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">lipL</name>
        <name evidence="2" type="ORF">LAX5112_00661</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.3.1.204" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65517.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00661"/>
    <dbReference type="EnsemblBacteria" id="CTQ65517">
        <property type="protein sequence ID" value="CTQ65517"/>
        <property type="gene ID" value="LAX5112_00661"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016746">
        <property type="term" value="F:acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.930.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045864">
        <property type="entry name" value="aa-tRNA-synth_II/BPL/LPL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004143">
        <property type="entry name" value="BPL_LPL_catalytic"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55681">
        <property type="entry name" value="SSF55681"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51733">
        <property type="entry name" value="BPL_LPL_CATALYTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="BPL/LPL catalytic" evidence="1">
        <location>
            <begin position="24"/>
            <end position="220"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51733"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65517.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="220" mass="24336" checksum="13047231D86CC6D0" modified="2015-12-09" version="1">MIDFMNAADALAHEMELLDDVSRNPDRRHLWFWESPQCLVSPKSLSNKTNFDEASRQLENEGWPINLRSTGGDVTPQGAGILNVTNVYATRPGNAVDLKQEYDRLCSPIEQALGNGASRGWQPGAFCDGEFNVQFNGRKFAGTAMRIRRGKADRTRSAVLTHAIMLIDPVSLDAIAAINRFLQLLEEDRQIDPDAHASLPAGYNKSDFVSALKDAFDAQT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTB0</accession>
    <name>A0A0M6ZTB0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Polynucleotide kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00360</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64673.1"/>
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        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
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        <property type="gene ID" value="LAX5112_00360"/>
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    </dbReference>
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    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
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        <location>
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            <end position="275"/>
        </location>
    </feature>
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            <dbReference type="Pfam" id="PF01636"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="EMBL" id="CTQ64673.1"/>
        </source>
    </evidence>
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            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="513" mass="56691" checksum="274330E280677CD0" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTT3</accession>
    <name>A0A0M6ZTT3_9HYPH</name>
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        <submittedName>
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        </submittedName>
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    <gene>
        <name evidence="7" type="primary">ycjP_1</name>
        <name evidence="7" type="ORF">LAX5112_00901</name>
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        <name type="scientific">Roseibium alexandrii</name>
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            <taxon>Alphaproteobacteria</taxon>
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        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
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        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
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            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
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            <topology evidence="1">Multi-pass membrane protein</topology>
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        </subcellularLocation>
    </comment>
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    </dbReference>
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        <property type="entry name" value="ABC_TM1"/>
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    </dbReference>
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    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
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            <end position="31"/>
        </location>
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            <end position="56"/>
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        </location>
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        </source>
    </evidence>
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    </evidence>
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        <source>
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        </source>
    </evidence>
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        </source>
    </evidence>
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            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
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            <dbReference type="EMBL" id="CTQ66185.1"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="409" mass="44114" checksum="AEF0B80547714E81" modified="2015-12-09" version="1">MRPGSILLIAITGLIWGVTAMVVIGVTLTLITGDVALPQATAAGVAGLIGALVLVWRQTADIKGIPAWVLSAVVLTLVLLLGTFAAPFTLPLNNVPFWQLAGLLAFVASVTAANHVSLNGATLGSMSRYEREVIYIRIFKGIGFVVFTIIVALPFYVMVMTSLKSQQALLANPLDLSIDLSQGLDGLFRSYVELFTQFNFGRYLMVSAIVSVGTVILTLLFSVPGAYAVSRLRFPGQALLSRSVLLIYMVPAIVLVIPLYAVFSQLGLRNTLTGLLIVYPATTIPVALYMLQGYFRGLPSELEEAGLMDGLSRLGVIMKITLPLSLPALASVSLYVFMIAWNEFLFAFMFLDDPDIFTLSRGVVSLNSSEVPRQHLMAGAVIATVPVLFIFLWFERFLVQGLTAGSVKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZU68</accession>
    <name>A0A0M6ZU68_9HYPH</name>
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        <submittedName>
            <fullName evidence="4">Hemolysin, chromosomal</fullName>
        </submittedName>
    </protein>
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        <name evidence="4" type="primary">hlyA_1</name>
        <name evidence="4" type="ORF">LAX5112_00938</name>
    </gene>
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        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
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            <taxon>Bacteria</taxon>
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            <taxon>Alphaproteobacteria</taxon>
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            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
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            <strain evidence="5">CECT 5112</strain>
        </source>
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        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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    </dbReference>
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        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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    </dbReference>
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    </dbReference>
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        <property type="entry name" value="Serralysin-like_metalloprot_C"/>
    </dbReference>
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        <property type="entry name" value="VCBS_rpt"/>
    </dbReference>
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    </dbReference>
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    </dbReference>
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    </dbReference>
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        <property type="match status" value="2"/>
    </dbReference>
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    </dbReference>
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    </dbReference>
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    </dbReference>
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    </dbReference>
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        </location>
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            <end position="2941"/>
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        <source>
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        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="PROSITE" id="PS50268"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="EMBL" id="CTQ66288.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="3127" mass="327069" checksum="371B65425740C35D" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUJ8</accession>
    <name>A0A0M6ZUJ8_9HYPH</name>
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        <submittedName>
            <fullName evidence="2">Flp pilus assembly protein CpaB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00542</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65194.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670482.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00542"/>
    <dbReference type="EnsemblBacteria" id="CTQ65194">
        <property type="protein sequence ID" value="CTQ65194"/>
        <property type="gene ID" value="LAX5112_00542"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017592">
        <property type="entry name" value="Pilus_assmbl_Flp-typ_CpaB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031571">
        <property type="entry name" value="RcpC_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013974">
        <property type="entry name" value="SAF"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16976">
        <property type="entry name" value="RcpC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08666">
        <property type="entry name" value="SAF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00858">
        <property type="entry name" value="SAF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03177">
        <property type="entry name" value="pilus_cpaB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SAF" evidence="1">
        <location>
            <begin position="45"/>
            <end position="113"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00858"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65194.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="254" mass="26957" checksum="E3D5EDEE1AEF2D13" modified="2015-12-09" version="1">MKFARILVLAIAVAAGVLAFRMVMMSGGSSDQASNAPVPMEQAKDQVLTAANDILLGAKLTAEDMVWTDWPEEAVPIGAVTKQVKPSASEELMGQIAKTPIFKGEPIRPERLINTDKGFMSSILPKGKRAIAVSVEAETTAGGFILPGDKVDVILTRRTDDTAISETILENIRVLAIDTTTAGEQDQKNLSPQRTATLELTLGQSEVVAQSQQVGAIALALRSAQDSADDAEPTETRRGVNLVKYGITSQAGVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUM3</accession>
    <name>A0A0M6ZUM3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">1,2-phenylacetyl-CoA epoxidase, subunit A</fullName>
            <ecNumber evidence="1">1.14.13.149</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">paaA_2</name>
        <name evidence="1" type="ORF">LAX5112_00800</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.14.13.149" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65911.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670715.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00800"/>
    <dbReference type="EnsemblBacteria" id="CTQ65911">
        <property type="protein sequence ID" value="CTQ65911"/>
        <property type="gene ID" value="LAX5112_00800"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0097266">
        <property type="term" value="F:phenylacetyl-CoA 1,2-epoxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010124">
        <property type="term" value="P:phenylacetate catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1260.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012347">
        <property type="entry name" value="Ferritin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009078">
        <property type="entry name" value="Ferritin-like_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011881">
        <property type="entry name" value="PaaA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007814">
        <property type="entry name" value="PaaA_PaaC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05138">
        <property type="entry name" value="PaaA_PaaC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47240">
        <property type="entry name" value="SSF47240"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02156">
        <property type="entry name" value="PA_CoA_Oxy1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ65911.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="332" mass="37899" checksum="030AF04F5E24787C" modified="2015-12-09" version="1">MYAQLVKSDALKSREDMSVDEQAFQQRIDNGEKIEPKDWMPEGYRKTLIRQIGQHAHSEIVGQLPEGNWISRAPTLERKAILLAKVQDEAGHGLYLYSAAETLGVSRDELFEALHSGKMKYSSIFNYPTLNWADMGAVGWLVDGAAIMNQVPLQRTSFGPYSRAMIRICKEESFHQRQGYSIMMKMAFGTPEQKEMAQDALNRFWYPSLMMFGPSDKDSVHSAQSMAWKIKINTNDELRQKFVNETVPQAEYLGLSVPDETLAWNEEKQGYDFAEPDWNEFFEVIKGNGPCNRERLEARVKAWDDGEWFRDGLNAYADKAADRRQAASVAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZV64</accession>
    <name>A0A0M6ZV64_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Putative periplasmic iron-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">LAX5112_00815</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="3">Belongs to the bacterial solute-binding protein 9 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65950.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00815"/>
    <dbReference type="EnsemblBacteria" id="CTQ65950">
        <property type="protein sequence ID" value="CTQ65950"/>
        <property type="gene ID" value="LAX5112_00815"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007155">
        <property type="term" value="P:cell adhesion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030001">
        <property type="term" value="P:metal ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006129">
        <property type="entry name" value="AdhesinB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006128">
        <property type="entry name" value="Lipoprotein_4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006127">
        <property type="entry name" value="ZnuA-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01297">
        <property type="entry name" value="ZnuA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00691">
        <property type="entry name" value="ADHESINB"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00690">
        <property type="entry name" value="ADHESNFAMILY"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4" id="KW-0732">Signal</keyword>
    <keyword evidence="1 3" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005808981" evidence="4">
        <location>
            <begin position="24"/>
            <end position="299"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU003512"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ65950.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="299" mass="32330" checksum="4E63A5D67DB450A9" modified="2015-12-09" version="1">MKKTALFAAVAAVAMVSGQSAWAEDKMKVVTTFTVIADMASNVAGDAAEVVSITKPGAEIHGYEPTPQDIVRASDANLILWNGMNLELWFEQFLSNLGDIPSATLTEGIDPISIRSGSYEGKPNPHAWMGLNNAQVYIDNIAAAFSAQDPANADVYKKNAEVYKEQLRGVIEPLRETIAQVPEDKRWLVTCEGAFSYLARDFGMKELYLWPMNADQVGTPQQVRSVIDGVKENNIPVVFCESTVNTAPAEQVARETGASYGGVLYVDSLSEADGQVPTYLDLLRVTSTTVAEGLESATN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZV81</accession>
    <name>A0A0M6ZV81_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">TRAP transporter solute receptor, DctP family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_00886</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the bacterial solute-binding protein 7 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66146.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00886"/>
    <dbReference type="EnsemblBacteria" id="CTQ66146">
        <property type="protein sequence ID" value="CTQ66146"/>
        <property type="gene ID" value="LAX5112_00886"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071702">
        <property type="term" value="P:organic substance transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.190.170">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018389">
        <property type="entry name" value="DctP_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006311">
        <property type="entry name" value="TAT_signal"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019546">
        <property type="entry name" value="TAT_signal_bac_arc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038404">
        <property type="entry name" value="TRAP_DctP_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33376">
        <property type="entry name" value="PTHR33376"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03480">
        <property type="entry name" value="DctP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01409">
        <property type="entry name" value="TAT_signal_seq"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0675">Receptor</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ66146.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="373" mass="41814" checksum="21107E2DB3880E49" modified="2015-12-09" version="1">MCGYMRSGKRTDRLTLEPKIRGTVMTNRRDFLKKAGTGTVAAAGAVTLAAPAVHGQTPIKWRLQTYAGPALAEHVIKPHIDAFNKAANGEMEIELYTADQLVPTGELFRAMQQGTIDAVQSDDDSMASPTEVTVFGGYFPFASRYSLDVPVLFNQYGLKEIWEEEYAKVGVKHISAGAWDPCHFATKDPIRSLEDLKGKRVFTFPTAGRFMAQFGVVPVTLPWEDIEVAVQTGELDGIAWSGITEDYTVGWADVTNYFLTNNISGAWAGSFFANQERWNELPDHLKTMLQLAMDASHYYRQWWYWGGEANLRVNGTKMELTSIPDEEWATVEAAAMVFWDEIAAESPTKAKVVEIFKKYNQDMQKAGRPYRYT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVL3</accession>
    <name>A0A0M6ZVL3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Adenylate cyclase 1</fullName>
            <ecNumber evidence="3">4.6.1.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">cyaA_5</name>
        <name evidence="3" type="ORF">LAX5112_00925</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="4.6.1.1" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66252.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670809.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00925"/>
    <dbReference type="EnsemblBacteria" id="CTQ66252">
        <property type="protein sequence ID" value="CTQ66252"/>
        <property type="gene ID" value="LAX5112_00925"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004016">
        <property type="term" value="F:adenylate cyclase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009190">
        <property type="term" value="P:cyclic nucleotide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035556">
        <property type="term" value="P:intracellular signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07302">
        <property type="entry name" value="CHD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1230">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001054">
        <property type="entry name" value="A/G_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00211">
        <property type="entry name" value="Guanylate_cyc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00044">
        <property type="entry name" value="CYCc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50125">
        <property type="entry name" value="GUANYLATE_CYCLASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0456">Lyase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="47"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="72"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="102"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="135"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="157"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="domain" description="Guanylate cyclase" evidence="2">
        <location>
            <begin position="279"/>
            <end position="411"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ66252.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="465" mass="51616" checksum="53A8BB94A213CC3B" modified="2015-12-09" version="1">MSALKLTNPFRIFARLRELRDEERKQAQSNLFLSQALEKEKMEGHRLAVIARTVALGLVVLLIPFLNPTLSALYYQAWVLVFIALGWLQLRLASVGYSRAELLLIFLDLFLLTALFTTANPFVSEDMPTAITYRFDNFIYFFIILAVGTLAYSWRTVWAIGTWVAILWMLGMIRVSLFGHEVPELSTLAAQAFSANPIVLGELDPNSVQPGVRIQEIVVFFMVAAILALKGWRSNQLLMRQADIAAERANLSRYFPSSLVDVLASSDRDIGAVRTQDVAVLFTDIVGFTEFAERHKPEQVMTLLRRYHAMVERVIFQNGGTLDKYLGDGVMATFGTPETKPSDAANALKAATQLLEENEAFNKGQADLGLDPIQISVGVHFGPVILGDIGPSRRLEFAVVGDTVNVASRLEAATRDLGCRCVVSEDLMRKAGYSDEALQPGLAYFSEQQAIKLRGRKTSINVCTI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVS3</accession>
    <name>A0A0M6ZVS3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Methionine--tRNA ligase</fullName>
            <ecNumber evidence="2">6.1.1.10</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">Methionyl-tRNA synthetase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="13" type="primary">metG</name>
        <name evidence="13" type="ORF">LAX5112_01112</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.</text>
    </comment>
    <comment type="similarity">
        <text evidence="10">Belongs to the class-I aminoacyl-tRNA synthetase family.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.10" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66838.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01112"/>
    <dbReference type="EnsemblBacteria" id="CTQ66838">
        <property type="protein sequence ID" value="CTQ66838"/>
        <property type="gene ID" value="LAX5112_01112"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004825">
        <property type="term" value="F:methionine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006431">
        <property type="term" value="P:methionyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07957">
        <property type="entry name" value="Anticodon_Ia_Met"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00814">
        <property type="entry name" value="MetRS_core"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041872">
        <property type="entry name" value="Anticodon_Met"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014758">
        <property type="entry name" value="Met-tRNA_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023457">
        <property type="entry name" value="Met-tRNA_synth_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015413">
        <property type="entry name" value="Methionyl/Leucyl_tRNA_Synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033911">
        <property type="entry name" value="MetRS_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009080">
        <property type="entry name" value="tRNAsynth_Ia_anticodon-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43326">
        <property type="entry name" value="PTHR43326"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19303">
        <property type="entry name" value="Anticodon_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09334">
        <property type="entry name" value="tRNA-synt_1g"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01041">
        <property type="entry name" value="TRNASYNTHMET"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47323">
        <property type="entry name" value="SSF47323"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00398">
        <property type="entry name" value="metG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 10" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="6 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 10 13" id="KW-0436">Ligase</keyword>
    <keyword evidence="5 10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7 10" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="tRNA-synt_1g" evidence="11">
        <location>
            <begin position="21"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="domain" description="tRNA-synt_1g" evidence="11">
        <location>
            <begin position="170"/>
            <end position="376"/>
        </location>
    </feature>
    <feature type="domain" description="Anticodon_3" evidence="12">
        <location>
            <begin position="388"/>
            <end position="522"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003314"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012838"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00018753"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00030904"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU363039"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF09334"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF19303"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="CTQ66838.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="523" mass="59326" checksum="63771D56279FB2BC" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWJ9</accession>
    <name>A0A0M6ZWJ9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01228</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67138.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671067.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01228"/>
    <dbReference type="EnsemblBacteria" id="CTQ67138">
        <property type="protein sequence ID" value="CTQ67138"/>
        <property type="gene ID" value="LAX5112_01228"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020049">
        <property type="entry name" value="DUF2184"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09950">
        <property type="entry name" value="DUF2184"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF029202">
        <property type="entry name" value="UCP029202"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67138.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="306" mass="33437" checksum="61299C9EE912BDC8" modified="2015-12-09" version="1">MSLNFDAQAALGFVVSQTTHIEREVNETVYPDIQYPALIPVDTSGHPWAQTVTYYSSDKFGKADWINGNASDVPLAGTERAKHQTSVHMAAIGYGWGYEDINHAMMLSINLQADDAVAARRAYEEMVDGVALNGDATKGFQGLINNSGVTAASATNGGWGAATEDQILQDVNDVILAVATDTAYTSMADTLLLPYPKLNFLATNRLGDTQMTILEFLRRNNTYTAMTGQQLTIRAVRGLETAGAGGTNRKIAYRRNPQVLKMHIPMPHRFLPVYQDGPLSWIVPGVFRLGGLDIRRPKEVRYGDGI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWS9</accession>
    <name>A0A0M6ZWS9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Exonuclease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01273</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67218.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01273"/>
    <dbReference type="EnsemblBacteria" id="CTQ67218">
        <property type="protein sequence ID" value="CTQ67218"/>
        <property type="gene ID" value="LAX5112_01273"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004527">
        <property type="term" value="F:exonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013520">
        <property type="entry name" value="Exonuclease_RNaseT/DNA_pol3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00929">
        <property type="entry name" value="RNase_T"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00479">
        <property type="entry name" value="EXOIII"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0269">Exonuclease</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0540">Nuclease</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Exonuclease" evidence="1">
        <location>
            <begin position="3"/>
            <end position="195"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67218.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="203" mass="23119" checksum="AB33E888FA62FF7D" modified="2015-12-09" version="1">MRVMTCFDLETTGLPRDMRIDDPNYPRMVQLGGVTWSSDGKVHGRIQNYVRQEDKRTSKAAEKIHGITDRISGTRGIPEAVAIGWITNSLRYSTDVVGWSLDFDLSIVQAALIRFGKNPNEIIRPGIQRHDLKEIMTPMVGKTNEDGSQRWPTLSEGYEWTFGKPLYEEGALHDAVRDSEACREIFMELWTRGVLHDLERLVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWT0</accession>
    <name>A0A0M6ZWT0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF1638 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00987</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66490.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671208.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00987"/>
    <dbReference type="EnsemblBacteria" id="CTQ66490">
        <property type="protein sequence ID" value="CTQ66490"/>
        <property type="gene ID" value="LAX5112_00987"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012437">
        <property type="entry name" value="DUF1638"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07796">
        <property type="entry name" value="DUF1638"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF1638" evidence="1">
        <location>
            <begin position="51"/>
            <end position="206"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07796"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66490.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="218" mass="24573" checksum="43309CEF913F6ECB" modified="2015-12-09" version="1">MQAGEPLFPIGTQEDANDKIGRVLVIACGALAREIIAIRDLNQLDHIDLTCLPAQLHNTPDKIPDEVRRVILQNRDIYSDILVAYGDCGTGGLLDKVLEETGTRRIEGAHCYAFFAGLEAFDQFEEDQLGSFYLTDFLARHFQTMVIEPLGLDWHPHLRDMYFAHYTRVLYLAQTDDPALDEAARRAAERLQLPLEIERTGYGSLAPFLTKEPAMPSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZX94</accession>
    <name>A0A0M6ZX94_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01044</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66650.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670931.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01044"/>
    <dbReference type="EnsemblBacteria" id="CTQ66650">
        <property type="protein sequence ID" value="CTQ66650"/>
        <property type="gene ID" value="LAX5112_01044"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ66650.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="77" mass="8547" checksum="29A340CCF2680A15" modified="2015-12-09" version="1">MNRGPRAGEIYIEFRPMGKQVQVTAIDAATGVEVSMFGPSSALQSDLQKLAVRKLKRRVEQVRAAELANKDQDPTLY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXL2</accession>
    <name>A0A0M6ZXL2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Transcriptional regulator PhoU</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01187</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67037.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671029.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01187"/>
    <dbReference type="EnsemblBacteria" id="CTQ67037">
        <property type="protein sequence ID" value="CTQ67037"/>
        <property type="gene ID" value="LAX5112_01187"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.220">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002575">
        <property type="entry name" value="Aminoglycoside_PTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038078">
        <property type="entry name" value="PhoU-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026022">
        <property type="entry name" value="PhoU_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01636">
        <property type="entry name" value="APH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01895">
        <property type="entry name" value="PhoU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="SSF56112"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PhoU" evidence="2">
        <location>
            <begin position="119"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="domain" description="APH" evidence="1">
        <location>
            <begin position="284"/>
            <end position="459"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01636"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01895"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ67037.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="544" mass="62173" checksum="44E9CD7F7D99C434" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXW3</accession>
    <name>A0A0M6ZXW3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01223</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67127.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671062.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67127">
        <property type="protein sequence ID" value="CTQ67127"/>
        <property type="gene ID" value="LAX5112_01223"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67127.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="167" mass="18785" checksum="315CB1E5FCD609B8" modified="2015-12-09" version="1">MTDTDVWEAFIRWLADQTGLKVIKAHQSGDRPSTPYLMVNFTAFRELREMPQNIEYRDTETLNSEGNPEIEATPVIEGEWDFSVHAYGDAPTGSLRKVKSVVHLSQRLEPLLPALTVHETGPINSVPDWVKKAWEPRAQMNVAVRGLIRDGAVVDVIEEYSIGISRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZY91</accession>
    <name>A0A0M6ZY91_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Virulence_fact domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00988</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66493.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451817.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00988"/>
    <dbReference type="EnsemblBacteria" id="CTQ66493">
        <property type="protein sequence ID" value="CTQ66493"/>
        <property type="gene ID" value="LAX5112_00988"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025989">
        <property type="entry name" value="Virulence_F_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13769">
        <property type="entry name" value="Virulence_fact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Virulence_fact" evidence="1">
        <location>
            <begin position="7"/>
            <end position="91"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13769"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66493.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="100" mass="11275" checksum="638D11C55372705E" modified="2015-12-09" version="1">MAQKTIVYWRDIPAQILVKKGRKSARRELPAVFMETIDACAMRVGAKDSDAYMAEWRRAEPVDVSDDLEQEADTALEALVADYPKQRLMDLMANGGLEND</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYN2</accession>
    <name>A0A0M6ZYN2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Virulence regulon transcriptional activator VirF</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">virF</name>
        <name evidence="5" type="ORF">LAX5112_01570</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67918.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671358.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01570"/>
    <dbReference type="EnsemblBacteria" id="CTQ67918">
        <property type="protein sequence ID" value="CTQ67918"/>
        <property type="gene ID" value="LAX5112_01570"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032783">
        <property type="entry name" value="AraC_lig"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018062">
        <property type="entry name" value="HTH_AraC-typ_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12852">
        <property type="entry name" value="Cupin_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00041">
        <property type="entry name" value="HTH_ARAC_FAMILY_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="4">
        <location>
            <begin position="168"/>
            <end position="265"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ67918.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="268" mass="29450" checksum="32267BD14D2DC8EE" modified="2015-12-09" version="1">MQAPYRTNFNGRLDRLSSLIDRLRVHVSDGGAGGHDVQHAMLMICKDPRQDLRLVLRPPEDSGSGALDLVRPRADESIIVSTNIEISGVGKRLFAALPICLSVDLADDPSLSSVVMPLVEEVMRPRCGGQAVFQRLCEIVVIRLLRHAMEGNEIDSGLLNGLSDPRVAQALVAIHEEPGENWTLERLAEIAGMSRTQFAVTFKSLIGITPMTYLSNWRLDIARDELAAGRQVKAVANMCGFSSPASFSRAFAKRYGAPPRRARQLEHN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZ23</accession>
    <name>A0A0M6ZZ23_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01383</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67422.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671186.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01383"/>
    <dbReference type="EnsemblBacteria" id="CTQ67422">
        <property type="protein sequence ID" value="CTQ67422"/>
        <property type="gene ID" value="LAX5112_01383"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67422.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="177" mass="18402" checksum="328A6AFA1B1BB63A" modified="2015-12-09" version="1">MTDRDLDLDVPLADLEEFRTKMREIDRSAQNISRSLVGGLKSALVDGKSLESVFKKIALSASSRVLNSALAPLEKAAGSLFDTIIPFAKGGVVGAPALFSMGNGVSGLMGEAGPEAILPLARGADGHLGVRSAEGGRSPMPAVQINVTAQDAESFRRSEAQVSAMVARAVGRGRRGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0H7</accession>
    <name>A0A0M7A0H7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Anaerobic benzoate catabolism transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01329</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67323.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671148.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67323">
        <property type="protein sequence ID" value="CTQ67323"/>
        <property type="gene ID" value="LAX5112_01329"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041413">
        <property type="entry name" value="MLTR_LBD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17765">
        <property type="entry name" value="MLTR_LBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00530">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="1">
        <location>
            <begin position="24"/>
            <end position="78"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67323.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="273" mass="30190" checksum="F5B663F8AF9DED42" modified="2015-12-09" version="1">MDKPLTYRNSQSMTQTASKFPELLKTWRSRRRLSQLDLALEAGLSQRHISFLETGRSKPSRMAISQLGLALGMPVAEVDTMLVSAGYAAPSMDQRWSAETRAAVQASIDHVLTGHEPFPAFSVDRIWTVQKANHAAQSFFAFLGNTTELNILRVILSPGPVRDRLRNWTDSARALMRIVEMEAARRPNDQEAQDLLRDLLDLPGVRDAMEAVPDGPPEPVLALKIGVDGVELSLFSMIATIGMSSDAALDDIRIETLLPADDATRSWFLARAH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1M6</accession>
    <name>A0A0M7A1M6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcriptional regulator SlyA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01960</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68988.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671641.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01960"/>
    <dbReference type="EnsemblBacteria" id="CTQ68988">
        <property type="protein sequence ID" value="CTQ68988"/>
        <property type="gene ID" value="LAX5112_01960"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000835">
        <property type="entry name" value="HTH_MarR-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12802">
        <property type="entry name" value="MarR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00598">
        <property type="entry name" value="HTHMARR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00347">
        <property type="entry name" value="HTH_MARR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50995">
        <property type="entry name" value="HTH_MARR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH marR-type" evidence="1">
        <location>
            <begin position="1"/>
            <end position="141"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68988.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="150" mass="16792" checksum="B6DE2779D7A7B36C" modified="2015-12-09" version="1">MDNASRHTLFSFFNEIGIIAQLSRAAMEARLPKGLTLPHFSVINHLIRVKDGQTPLALAKAFQVPKTTMTHTLSGLLDHGLVDMRPNPKDGRSKTVWLTEAGRQFRETAIRSIDPDMSAIKSAIPEEKIAEILPLLAEVRIFMDAYRDEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1Z1</accession>
    <name>A0A0M7A1Z1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Multiple resistance and pH homeostasis protein E</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">mrpE_2</name>
        <name evidence="9" type="ORF">LAX5112_01518</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the CPA3 antiporters (TC 2.A.63) subunit E family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67784.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040450782.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01518"/>
    <dbReference type="EnsemblBacteria" id="CTQ67784">
        <property type="protein sequence ID" value="CTQ67784"/>
        <property type="gene ID" value="LAX5112_01518"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008324">
        <property type="term" value="F:cation transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002758">
        <property type="entry name" value="Cation_antiport_E"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34584">
        <property type="entry name" value="PTHR34584"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01899">
        <property type="entry name" value="MNHE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF019239">
        <property type="entry name" value="MrpE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="26"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="57"/>
            <end position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006228"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ67784.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="158" mass="17475" checksum="C5C0292FC56692FA" modified="2015-12-09" version="1">MTSLFLINILMALAWAAVTGSFSEINLALGFVLGTAALYLIREQVGTTAYFSRVGKAFNLAATFVYELVLSAWRVATIVVRPKIELQPGFIAYPLTVDRDFEITMLANLITLTPGTLSVDVSADRKTLYVHCIDVPDPQATIDDIKNGFERKILEVFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1Z7</accession>
    <name>A0A0M7A1Z7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01977</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ69025.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ69025">
        <property type="protein sequence ID" value="CTQ69025"/>
        <property type="gene ID" value="LAX5112_01977"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="37"/>
            <end position="74"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69025.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="74" mass="8038" checksum="DCB6150617033774" modified="2015-12-09" version="1">MNIKALTLAAAAFSIGFIGEVDLSGIQQGGPVTFQVSEADAQTASRNAARRTSRRTSRRVNRRHDAYENATEND</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2S8</accession>
    <name>A0A0M7A2S8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Coenzyme A biosynthesis bifunctional protein CoaBC</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">DNA/pantothenate metabolism flavoprotein</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="3">Phosphopantothenoylcysteine synthetase/decarboxylase</fullName>
            <shortName evidence="3">PPCS-PPCDC</shortName>
        </alternativeName>
        <domain>
            <recommendedName>
                <fullName evidence="3">Phosphopantothenoylcysteine decarboxylase</fullName>
                <shortName evidence="3">PPC decarboxylase</shortName>
                <shortName evidence="3">PPC-DC</shortName>
                <ecNumber evidence="3">4.1.1.36</ecNumber>
            </recommendedName>
            <alternativeName>
                <fullName evidence="3">CoaC</fullName>
            </alternativeName>
        </domain>
        <domain>
            <recommendedName>
                <fullName evidence="3">Phosphopantothenate--cysteine ligase</fullName>
                <ecNumber evidence="3">6.3.2.5</ecNumber>
            </recommendedName>
            <alternativeName>
                <fullName evidence="3">CoaB</fullName>
            </alternativeName>
            <alternativeName>
                <fullName evidence="3">Phosphopantothenoylcysteine synthetase</fullName>
                <shortName evidence="3">PPC synthetase</shortName>
                <shortName evidence="3">PPC-S</shortName>
            </alternativeName>
        </domain>
    </protein>
    <gene>
        <name evidence="3 7" type="primary">coaBC</name>
        <name evidence="7" type="ORF">LAX5112_02088</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Catalyzes two sequential steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine. In the second step the latter compound is decarboxylated to form 4'-phosphopantotheine.</text>
    </comment>
    <comment type="function">
        <text evidence="4">Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3 4">
            <text>(R)-4'-phosphopantothenate + CTP + L-cysteine = CMP + diphosphate + H(+) + N-[(R)-4-phosphopantothenoyl]-L-cysteine</text>
            <dbReference type="Rhea" id="RHEA:19397"/>
            <dbReference type="ChEBI" id="CHEBI:10986"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:35235"/>
            <dbReference type="ChEBI" id="CHEBI:37563"/>
            <dbReference type="ChEBI" id="CHEBI:59458"/>
            <dbReference type="ChEBI" id="CHEBI:60377"/>
            <dbReference type="EC" id="6.3.2.5"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3 4">
            <text>H(+) + N-[(R)-4-phosphopantothenoyl]-L-cysteine = (R)-4'-phosphopantetheine + CO2</text>
            <dbReference type="Rhea" id="RHEA:16793"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:59458"/>
            <dbReference type="ChEBI" id="CHEBI:61723"/>
            <dbReference type="EC" id="4.1.1.36"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="3">
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </cofactor>
        <text evidence="3">Binds 1 FMN per subunit.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="3">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="3 4">Cofactor biosynthesis; coenzyme A biosynthesis; CoA from (R)-pantothenate: step 2/5.</text>
    </comment>
    <comment type="pathway">
        <text evidence="3 4">Cofactor biosynthesis; coenzyme A biosynthesis; CoA from (R)-pantothenate: step 3/5.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 4">In the C-terminal section; belongs to the PPC synthetase family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 4">In the N-terminal section; belongs to the HFCD (homo-oligomeric flavin containing Cys decarboxylase) superfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="4.1.1.36" evidence="3"/>
    <dbReference type="EC" id="6.3.2.5" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69368.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671758.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02088"/>
    <dbReference type="EnsemblBacteria" id="CTQ69368">
        <property type="protein sequence ID" value="CTQ69368"/>
        <property type="gene ID" value="LAX5112_02088"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00241">
        <property type="reaction ID" value="UER00353"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010181">
        <property type="term" value="F:FMN binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004632">
        <property type="term" value="F:phosphopantothenate--cysteine ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004633">
        <property type="term" value="F:phosphopantothenoylcysteine decarboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015937">
        <property type="term" value="P:coenzyme A biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015941">
        <property type="term" value="P:pantothenate catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1950">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02225">
        <property type="entry name" value="CoaBC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035929">
        <property type="entry name" value="CoaB-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005252">
        <property type="entry name" value="CoaBC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007085">
        <property type="entry name" value="DNA/pantothenate-metab_flavo_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036551">
        <property type="entry name" value="Flavin_trans-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003382">
        <property type="entry name" value="Flavoprotein"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04127">
        <property type="entry name" value="DFP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02441">
        <property type="entry name" value="Flavoprotein"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF102645">
        <property type="entry name" value="SSF102645"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52507">
        <property type="entry name" value="SSF52507"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00521">
        <property type="entry name" value="coaBC_dfp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 3 4" id="KW-0210">Decarboxylase</keyword>
    <keyword evidence="3 4" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="3 4" id="KW-0288">FMN</keyword>
    <keyword evidence="3 4" id="KW-0436">Ligase</keyword>
    <keyword evidence="2 3 4" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-0460">Magnesium</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3" id="KW-0511">Multifunctional enzyme</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Flavoprotein" evidence="5">
        <location>
            <begin position="5"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="domain" description="DFP" evidence="6">
        <location>
            <begin position="192"/>
            <end position="376"/>
        </location>
    </feature>
    <feature type="region of interest" description="Phosphopantothenoylcysteine decarboxylase" evidence="3">
        <location>
            <begin position="1"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="region of interest" description="Phosphopantothenate--cysteine ligase" evidence="3">
        <location>
            <begin position="197"/>
            <end position="410"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="284"/>
        </location>
        <ligand>
            <name>CTP</name>
            <dbReference type="ChEBI" id="CHEBI:37563"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="294"/>
        </location>
        <ligand>
            <name>CTP</name>
            <dbReference type="ChEBI" id="CHEBI:37563"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="312"/>
            <end position="315"/>
        </location>
        <ligand>
            <name>CTP</name>
            <dbReference type="ChEBI" id="CHEBI:37563"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="332"/>
        </location>
        <ligand>
            <name>CTP</name>
            <dbReference type="ChEBI" id="CHEBI:37563"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="346"/>
        </location>
        <ligand>
            <name>CTP</name>
            <dbReference type="ChEBI" id="CHEBI:37563"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="350"/>
        </location>
        <ligand>
            <name>CTP</name>
            <dbReference type="ChEBI" id="CHEBI:37563"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022793"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02225"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU364078"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF02441"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF04127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ69368.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="410" mass="43520" checksum="BFD2FEAAEB5E7EEA" modified="2015-12-09" version="1">MLAGKEIVLIISGGIAAYKSLDLIRRLKERGARVVPIMTDGAQEFITPLAVGALSAEKVFTNLFDREAEHDVGHIRLARDHDLILVAPATANLMAKMAHGIADDLATAVLLATDKPVLLAPAMNPKMWQNPATLKNLNILRQRGIAFIGPASGEMAEKGEAGVGRMSEPLDIAGAAEHLLRDQAIAAGKLPMAGKHVLITSGPTHEPIDPVRYIANRSSGKQGHALAEAAFAAGARVTLVSGPVTIPDPDHVTTIHVESAAEMMAAVEQNLPADIAIMAAAVADWRVVSEGDQKIKKDGSGKPPGLELTENPDILRTIGHHKTLRPSLLIGFAAETQDLIKNATAKLERKRADWIVANDVSPATGIMGGDANTIRLVSANGVEDWPAMDKKDVARQLIARAAEMLSRDKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3C4</accession>
    <name>A0A0M7A3C4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Bcr/CflA family efflux transporter</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">ydhC_1</name>
        <name evidence="9" type="ORF">LAX5112_01958</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cell inner membrane</location>
            <topology evidence="7">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the major facilitator superfamily. Bcr/CmlA family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68982.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671640.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01958"/>
    <dbReference type="EnsemblBacteria" id="CTQ68982">
        <property type="protein sequence ID" value="CTQ68982"/>
        <property type="gene ID" value="LAX5112_01958"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042910">
        <property type="term" value="F:xenobiotic transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990961">
        <property type="term" value="P:xenobiotic detoxification by transmembrane export across the plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004812">
        <property type="entry name" value="Efflux_drug-R_Bcr/CmlA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005829">
        <property type="entry name" value="Sugar_transporter_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00710">
        <property type="entry name" value="efflux_Bcr_CflA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00216">
        <property type="entry name" value="SUGAR_TRANSPORT_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="7" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3 7" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="16"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="49"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="84"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="109"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="142"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="170"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="220"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="256"/>
            <end position="274"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="286"/>
            <end position="307"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="319"/>
            <end position="340"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="352"/>
            <end position="371"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="383"/>
            <end position="404"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="8">
        <location>
            <begin position="18"/>
            <end position="408"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006236"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU365088"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ68982.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="414" mass="43231" checksum="A8AE27D755D9A16C" modified="2015-12-09" version="1">MASDLTAHTTREPKRIAFVVMLMGISTLSPFAMNIYLPSVDGMMSAFSATAAEIQLTLAFYFIAIAGAQIFLGPISDQFGRRPVVVAGMVLFVIGSVLCLMAPTVEALIAARIVQAIGGGAGLVLARAIVRDVYGRDKAASMIGYVAMGMAVAPTIGPAIGGFLDAHYGWRGGFALMLIFGIGVTICAWLFLPETNQHKKAVSLKQIGQGYADLFKEKMFWVFCGASTFMAWLYFAYLGGAPFVAAGVFNMAPAEIGLYLMVVSIGYIIGNFITGRIAARAGIARMIALGVITGVFGVSLLVVGTLTDSLTGPLFFMPMFFIGLGNGLGIPSAISGAVSIRPDLAGTASGMLSFLQVGAGALVSSAVAYMFSADIAGGGEMPMILVMVVGGVFGLACVLAVFLGERQDTSYEDR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3K5</accession>
    <name>A0A0M7A3K5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative ring-cleaving dioxygenase MhqO</fullName>
            <ecNumber evidence="2">1.13.11.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">mhqO</name>
        <name evidence="2" type="ORF">LAX5112_02122</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.13.11.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69459.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671781.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02122"/>
    <dbReference type="EnsemblBacteria" id="CTQ69459">
        <property type="protein sequence ID" value="CTQ69459"/>
        <property type="gene ID" value="LAX5112_02122"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051213">
        <property type="term" value="F:dioxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.180.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029068">
        <property type="entry name" value="Glyas_Bleomycin-R_OHBP_Dase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004360">
        <property type="entry name" value="Glyas_Fos-R_dOase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037523">
        <property type="entry name" value="VOC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00903">
        <property type="entry name" value="Glyoxalase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54593">
        <property type="entry name" value="SSF54593"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51819">
        <property type="entry name" value="VOC"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0223">Dioxygenase</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="VOC" evidence="1">
        <location>
            <begin position="7"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="domain" description="VOC" evidence="1">
        <location>
            <begin position="153"/>
            <end position="271"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51819"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69459.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="310" mass="34180" checksum="4CEED4F30327C95A" modified="2015-12-09" version="1">MDKLIKGLHHITSMAADAQKNNDFFTKALGLRRVKKTVNFDAPDVYHLYYGDETGTPGSVMTYFPFGQMPNGARGSGEVGVTEFAVPRGSLGFWADRLASHSVSDLQNDRFLNEDRLTFSGPDGDSFAFVETEAEGRIPWTADGVAQDVGILGFHGARFRLRDAAATGELLGFMGYQKDETDGSVTRYRIEDGNAARTIDLEEVPQASPARQGAGSVHHIAFAVEDRTAQLAVRKALMDTGYQVTPVIDRDYFWAIYFRTPGGVLFEVATNEPGFDRDEDTAHLGEALKLPTRYEPHRAQIEAQLPPLDQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3P3</accession>
    <name>A0A0M7A3P3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Cation efflux system protein CusB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">cusB</name>
        <name evidence="4" type="ORF">LAX5112_02208</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69678.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671847.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02208"/>
    <dbReference type="EnsemblBacteria" id="CTQ69678">
        <property type="protein sequence ID" value="CTQ69678"/>
        <property type="gene ID" value="LAX5112_02208"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.320">
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021647">
        <property type="entry name" value="CusF_Ec"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042230">
        <property type="entry name" value="CusF_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032317">
        <property type="entry name" value="HlyD_D23"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006143">
        <property type="entry name" value="RND_pump_MFP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11604">
        <property type="entry name" value="CusF_Ec"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16576">
        <property type="entry name" value="HlyD_D23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01730">
        <property type="entry name" value="RND_mfp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HlyD_D23" evidence="3">
        <location>
            <begin position="104"/>
            <end position="311"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="559"/>
            <end position="581"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF16576"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ69678.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="735" mass="78276" checksum="33D9E00E07FEA473" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A544</accession>
    <name>A0A0M7A544_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 13">Adenine DNA glycosylase</fullName>
            <ecNumber evidence="4 13">3.2.2.31</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="primary">yfhQ</name>
        <name evidence="15" type="ORF">LAX5112_02405</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Adenine glycosylase active on G-A mispairs. MutY also corrects error-prone DNA synthesis past GO lesions which are due to the oxidatively damaged form of guanine: 7,8-dihydro-8-oxoguanine (8-oxo-dGTP).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 13">
            <text>Hydrolyzes free adenine bases from 7,8-dihydro-8-oxoguanine:adenine mismatched double-stranded DNA, leaving an apurinic site.</text>
            <dbReference type="EC" id="3.2.2.31"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="13">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
        <text evidence="13">Binds 1 [4Fe-4S] cluster.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 13">Belongs to the Nth/MutY family.</text>
    </comment>
    <dbReference type="EC" id="3.2.2.31" evidence="4 13"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70198.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672127.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02405"/>
    <dbReference type="EnsemblBacteria" id="CTQ70198">
        <property type="protein sequence ID" value="CTQ70198"/>
        <property type="gene ID" value="LAX5112_02405"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000701">
        <property type="term" value="F:purine-specific mismatch base pair DNA N-glycosylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006284">
        <property type="term" value="P:base-excision repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd03431">
        <property type="entry name" value="DNA_Glycosylase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00056">
        <property type="entry name" value="ENDO3c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1670.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005760">
        <property type="entry name" value="A/G_AdeGlyc_MutY"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011257">
        <property type="entry name" value="DNA_glycosylase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004036">
        <property type="entry name" value="Endonuclease-III-like_CS2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004035">
        <property type="entry name" value="Endouclease-III_FeS-bd_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003265">
        <property type="entry name" value="HhH-GPD_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023170">
        <property type="entry name" value="HhH_base_excis_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000445">
        <property type="entry name" value="HhH_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044298">
        <property type="entry name" value="MIG/MutY"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029119">
        <property type="entry name" value="MutY_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015797">
        <property type="entry name" value="NUDIX_hydrolase-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42944">
        <property type="entry name" value="PTHR42944"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00633">
        <property type="entry name" value="HHH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00730">
        <property type="entry name" value="HhH-GPD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14815">
        <property type="entry name" value="NUDIX_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00478">
        <property type="entry name" value="ENDO3c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48150">
        <property type="entry name" value="SSF48150"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55811">
        <property type="entry name" value="SSF55811"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01084">
        <property type="entry name" value="mutY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00764">
        <property type="entry name" value="ENDONUCLEASE_III_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01155">
        <property type="entry name" value="ENDONUCLEASE_III_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="7 13" id="KW-0227">DNA damage</keyword>
    <keyword evidence="11" id="KW-0234">DNA repair</keyword>
    <keyword evidence="12 13 15" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="8 15" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="9 13" id="KW-0408">Iron</keyword>
    <keyword evidence="10" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ENDO3c" evidence="14">
        <location>
            <begin position="52"/>
            <end position="201"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000843"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00002933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008343"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012045"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU365096"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="SMART" id="SM00478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="CTQ70198.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="360" mass="39456" checksum="6C09A148A1E46EED" modified="2015-12-09" version="1">MAENPQSPSLLSSSLLEWYDRHARTLPWRVGPENRRLGEVPDPYRIWLSEVMLQQTTVAAVKSYFEVFTRTWPTVKDLAAADEEDVMKAWAGLGYYSRARNLKKCADLVASAYDGEFPDTENALLKLPGIGPYTAAAIATIAFDRHAAVVDGNVERVLSRLKLIETPLPASKPEIKSVMADLTPKARPGDFAQAVMDLGATICTPKKPACVLCPWRETCEGHRAGLAETLPRKAPKTKKPTRHGAAFVAVDAASGAVFLRRRPPEGLLGGMTEVPGSVWSEDFDTGTSLAHAPFAADWQKRTGEVKHTFTHFHLKLTIFRAEMSGNDQLGTDTGWWSAADTLSEEALPTVMRKVLTAALD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5D7</accession>
    <name>A0A0M7A5D7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">HupE / UreJ protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02455</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70298.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672051.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02455"/>
    <dbReference type="EnsemblBacteria" id="CTQ70298">
        <property type="protein sequence ID" value="CTQ70298"/>
        <property type="gene ID" value="LAX5112_02455"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007038">
        <property type="entry name" value="HupE_UreJ"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04955">
        <property type="entry name" value="HupE_UreJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF016919">
        <property type="entry name" value="HupE_UreJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809099" evidence="2">
        <location>
            <begin position="22"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="37"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="64"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="93"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="138"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="178"/>
            <end position="196"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ70298.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="197" mass="19605" checksum="0B509E36483AC175" modified="2015-12-09" version="1">MSIRFAAAVFLVAVSASPAFAHLDPAEHGSFAAGFTHPVFGLDHVLAMIAVGLWAALVGGRAIWLLPTVFVGAMLSGFALSLAGVPIPYVEPVILASVIILGLIVAAAVNLPNWLSVALVAIFGLCHGHAHGGEMGNAGWLGYAAGFALATVILHAAGVLIGHGANVAAGRDGPVAKTIIRAIGAATAAGGVLLVVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5G2</accession>
    <name>A0A0M7A5G2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02376</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70139.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671993.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02376"/>
    <dbReference type="EnsemblBacteria" id="CTQ70139">
        <property type="protein sequence ID" value="CTQ70139"/>
        <property type="gene ID" value="LAX5112_02376"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ70139.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="194" mass="20874" checksum="BE4AF6A9A0A0F8F8" modified="2015-12-09" version="1">MFKAFQALSHVNSKTTVSVALCAAFLTGCGATGDIAENVISGGAEPVQVSRETFAPPVPCPPLQMKTNSHLIREFVRGKDGERDGLIYQALVEDSAVSCSQEADGQRRLKLGFTGDVTPGPAWRGGDVVLPLRVTIPASSDAEQKPLVSEVIQIPVSIEAGGRGQQWTYVDEKFVIPMNQGSKIQFGFEEGRRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A658</accession>
    <name>A0A0M7A658_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01988</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69114.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671691.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01988"/>
    <dbReference type="EnsemblBacteria" id="CTQ69114">
        <property type="protein sequence ID" value="CTQ69114"/>
        <property type="gene ID" value="LAX5112_01988"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007362">
        <property type="entry name" value="DUF429"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04250">
        <property type="entry name" value="DUF429"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ69114.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="245" mass="27475" checksum="5222ABC31DBA86A5" modified="2015-12-09" version="1">MPESAGTWVAGVDGCRAGWIAVLRNLSDRKNLKLQLFEHFADLLSFLPELKIIAVDMPIGLPNLLGPDGRGAEKAARKHLGIRQSSVFSVPSRAAVYEEDYRASCETSLKTSSPPRKVSKQCFYLFPKIREIDGLMTPELESRIYEVHPELAFWRLNGEAEMNMPKKVKSRANPSGLDLRRDLLVSKGLPKPFLDQKPPRGCGRDDLLDAAANSLIAERIFNRQAEPFPENYQRDGKGLRMAIWA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6A4</accession>
    <name>A0A0M7A6A4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Regulatory protein CsrD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">LAX5112_02313</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ69992.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02313"/>
    <dbReference type="EnsemblBacteria" id="CTQ69992">
        <property type="protein sequence ID" value="CTQ69992"/>
        <property type="gene ID" value="LAX5112_02313"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01948">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.450">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001633">
        <property type="entry name" value="EAL_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035919">
        <property type="entry name" value="EAL_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00563">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00052">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141868">
        <property type="entry name" value="SSF141868"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50883">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="20"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="domain" description="EAL" evidence="4">
        <location>
            <begin position="242"/>
            <end position="495"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="114"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="47"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="136"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="2">
        <location>
            <begin position="160"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="190"/>
            <end position="216"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ69992.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="501" mass="55711" checksum="593CAEE04A2BDC5E" modified="2015-12-09" version="1">MVIIALSSAAVMVFQFGRPFGEAVSLSLALMCTMILVHLLIGRSRDRSAVSDAVERLEERMTDLDEDVGNLEGRLTGMEHTMPRRTRAEIDPLFAEVEVLGTLVKQMAEAMSDLETKVEDQQAIAPPPPMQSLPQYQQPQQPNPGYPQTNGQGQPYPGQYPQQAPAPHAPYAPPQAPQPGPYNDGVVPTHRDMSELDRRYGVHVPRDDRSPDNGAGGREIDEGFVDLPAEPSPEHSTKLGPNPAMNELITSALNANRVELFLQPIVSLPQRQVKHYEAFTRLRNANGDSIEAQAFMPEAVRSGHIARIDNLLLFRSVQVIRRLMSRNRNAVLFCNISSLSLSDKTFFPGFLEFVRSNREFSDALIFEFSQSDIAQMGAVELESLAALYESGFRFSVDQIDDMRMDFNSLAGRGFKYGKLNADYLIGRRETNHGHIHPADFGDLLHRYGMELITDHVETESQVLELLDFDVKLAQGNLFSPPRPVRAEVLQGTPAPRKKAAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6P2</accession>
    <name>A0A0M7A6P2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02548</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70549.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70549">
        <property type="protein sequence ID" value="CTQ70549"/>
        <property type="gene ID" value="LAX5112_02548"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="63"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="69"/>
            <end position="93"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70549.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="170" mass="17956" checksum="C54B6BE9FCC29DA0" modified="2015-12-09" version="1">MSSTLVFSPDAKDFTSTRPTASGDRSSDKALICRSTPPSRLPAGKSTVFPAIWVATSETVRSRRRSSRSGISTRYSGDRYPLSSTLSMPRASRSSRICRANTFNACSGNGPRRASVATPSVKFAADTTGVSESTGSVVTAETACSTSDNAFCMSVPSKNSIRTEALPSRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6V3</accession>
    <name>A0A0M7A6V3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 6">Bacterioferritin</fullName>
            <ecNumber evidence="4">1.16.3.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">bfr_2</name>
        <name evidence="8" type="ORF">LAX5112_02402</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>4 Fe(2+) + 4 H(+) + O2 = 4 Fe(3+) + 2 H2O</text>
            <dbReference type="Rhea" id="RHEA:11148"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:29033"/>
            <dbReference type="ChEBI" id="CHEBI:29034"/>
            <dbReference type="EC" id="1.16.3.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>heme b</name>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 4 6">Belongs to the bacterioferritin family.</text>
    </comment>
    <dbReference type="EC" id="1.16.3.1" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70192.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451567.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02402"/>
    <dbReference type="EnsemblBacteria" id="CTQ70192">
        <property type="protein sequence ID" value="CTQ70192"/>
        <property type="gene ID" value="LAX5112_02402"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008199">
        <property type="term" value="F:ferric iron binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004322">
        <property type="term" value="F:ferroxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006879">
        <property type="term" value="P:cellular iron ion homeostasis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006826">
        <property type="term" value="P:iron ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00907">
        <property type="entry name" value="Bacterioferritin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1260.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002024">
        <property type="entry name" value="Bacterioferritin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012347">
        <property type="entry name" value="Ferritin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009040">
        <property type="entry name" value="Ferritin-like_diiron"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009078">
        <property type="entry name" value="Ferritin-like_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008331">
        <property type="entry name" value="Ferritin_DPS_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00210">
        <property type="entry name" value="Ferritin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002560">
        <property type="entry name" value="Bacterioferritin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00601">
        <property type="entry name" value="BACFERRITIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47240">
        <property type="entry name" value="SSF47240"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00754">
        <property type="entry name" value="bfr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00549">
        <property type="entry name" value="BACTERIOFERRITIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50905">
        <property type="entry name" value="FERRITIN_LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 6" id="KW-0349">Heme</keyword>
    <keyword evidence="4 5 6" id="KW-0408">Iron</keyword>
    <keyword evidence="4 6" id="KW-0409">Iron storage</keyword>
    <keyword evidence="4 5 6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ferritin-like diiron" evidence="7">
        <location>
            <begin position="1"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="18"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="50"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
            <label>3</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="51"/>
        </location>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="5">
        <location>
            <position position="52"/>
        </location>
        <ligand>
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
            <note>ligand shared between dimeric partners</note>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="54"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="94"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="127"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="130"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
            <label>2</label>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008093"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRNR" id="PIRNR002560"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR002560-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU000623"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50905"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ70192.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="161" mass="18476" checksum="CAF1363913ED8B50" modified="2015-12-09" version="1">MKGNEKVIACLNEALFLELGAINQYWLHYRMLADWGYAKLAKKEREESIEEMEHADKLVDRIIFLEGLPNMQKVAPLRIGQDIKEVLEADLAGEYDARTAYSKSREVCREEGDYVSMAIFEELLKDEEGHIDFLETQLELLEKIGVERYGMLNAASADEAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6Z2</accession>
    <name>A0A0M7A6Z2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Fe(II)-dependent oxygenase superfamily protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">LAX5112_02404</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>L-ascorbate</name>
            <dbReference type="ChEBI" id="CHEBI:38290"/>
        </cofactor>
    </comment>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70196.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672019.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02404"/>
    <dbReference type="EnsemblBacteria" id="CTQ70196">
        <property type="protein sequence ID" value="CTQ70196"/>
        <property type="gene ID" value="LAX5112_02404"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051213">
        <property type="term" value="F:dioxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031418">
        <property type="term" value="F:L-ascorbic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016705">
        <property type="term" value="F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005123">
        <property type="entry name" value="Oxoglu/Fe-dep_dioxygenase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006620">
        <property type="entry name" value="Pro_4_hyd_alph"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044862">
        <property type="entry name" value="Pro_4_hyd_alph_FE2OG_OXY"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13640">
        <property type="entry name" value="2OG-FeII_Oxy_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00702">
        <property type="entry name" value="P4Hc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51471">
        <property type="entry name" value="FE2OG_OXY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0223">Dioxygenase</keyword>
    <keyword evidence="6" id="KW-0408">Iron</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0847">Vitamin C</keyword>
    <feature type="domain" description="Fe2OG dioxygenase" evidence="7">
        <location>
            <begin position="81"/>
            <end position="178"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022896"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022964"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ70196.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="182" mass="20377" checksum="BF8BBFD119CB1538" modified="2015-12-09" version="1">MFTYEISDLFSPGECSEIIRLSKSNDQDRAGLVGGKQQSKIRRAKISWLDDDRTGAWVLNRIMSAVAKANREAFNFDITEFKEKLQVAVYDQSDEGHYDWHSDVGNGAIAQFRKSTIVTQLSCSEDYEGGALEISLGSNILTANRAQGNSTLFASFMLHRVVPVSKGTRFSLTCWSHGPRFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A742</accession>
    <name>A0A0M7A742_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">tRNA uridine(34) hydroxylase</fullName>
            <ecNumber evidence="1">1.14.-.-</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="1">tRNA hydroxylation protein O</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="1" type="primary">trhO</name>
        <name evidence="3" type="ORF">LAX5112_02673</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Catalyzes oxygen-dependent 5-hydroxyuridine (ho5U) modification at position 34 in tRNAs.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>AH2 + O2 + uridine(34) in tRNA = 5-hydroxyuridine(34) in tRNA + A + H2O</text>
            <dbReference type="Rhea" id="RHEA:64224"/>
            <dbReference type="Rhea" id="RHEA-COMP:11727"/>
            <dbReference type="Rhea" id="RHEA-COMP:13381"/>
            <dbReference type="ChEBI" id="CHEBI:13193"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:17499"/>
            <dbReference type="ChEBI" id="CHEBI:65315"/>
            <dbReference type="ChEBI" id="CHEBI:136877"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the TrhO family.</text>
    </comment>
    <dbReference type="EC" id="1.14.-.-" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70975.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672237.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02673"/>
    <dbReference type="EnsemblBacteria" id="CTQ70975">
        <property type="protein sequence ID" value="CTQ70975"/>
        <property type="gene ID" value="LAX5112_02673"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016705">
        <property type="term" value="F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006400">
        <property type="term" value="P:tRNA modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.250.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00469">
        <property type="entry name" value="TrhO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001763">
        <property type="entry name" value="Rhodanese-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036873">
        <property type="entry name" value="Rhodanese-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020936">
        <property type="entry name" value="TrhO"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040503">
        <property type="entry name" value="TRHO_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43268">
        <property type="entry name" value="PTHR43268"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00581">
        <property type="entry name" value="Rhodanese"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17773">
        <property type="entry name" value="UPF0176_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00450">
        <property type="entry name" value="RHOD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52821">
        <property type="entry name" value="SSF52821"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50206">
        <property type="entry name" value="RHODANESE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="Rhodanese" evidence="2">
        <location>
            <begin position="123"/>
            <end position="217"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00469"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50206"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ70975.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="271" mass="31237" checksum="8578BA21C6C0B205" modified="2015-12-09" version="1">MNDFLVSALYYFTPLDDFEEMRDPLKTFCVSQDVRGSLLLASEGINGTICGPEAGVRAVLEYLRSDPRLAELTHKESWTHRHVFKRMKVRLKQEIVRLAVDNIDPNEVVGEYVKPEDWNALISEPGVIVIDTRNDYEYAFGTFEGAVNPETQSFREFPEWVHDQENLKTKPKVAMFCTGGIRCEKATAWMLKNGFKDVYHLEGGILNYLEKVPEDKSLWNGECFVFDDRVSVDHKLEPRWGEWVPEEARHIINEDTDYEKGPVQQDLSKTG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7A4</accession>
    <name>A0A0M7A7A4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02670</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70968.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70968">
        <property type="protein sequence ID" value="CTQ70968"/>
        <property type="gene ID" value="LAX5112_02670"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="148"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="39"/>
            <end position="93"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ70968.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="260" mass="26285" checksum="CC07831CA4CAECCC" modified="2015-12-09" version="1">MVRKPSPAAPADAGDPTASAQGAKGAPATAAADTPPQKAGPSDRTSGQAAAAVQTASSAPSGEAGSAGQQNAAPGSATGADTGAGSGSGRGSSGGSDLLKEILEGFLKTSTLQSDYQSLYRSLPTVVGIAAEILKKKEAGDAALDEGMQAVERVLTDARDKAEQLSNTMSAQQADLEKLLNDKASLTELLKASQQKKGEAFQGMPQFGPGTAALADPKVAYQLNTLMGNINSMVAREVERQIAGLRSQANAAPQHNRPKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7I9</accession>
    <name>A0A0M7A7I9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Hca operon transcriptional activator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">hcaR_2</name>
        <name evidence="3" type="ORF">LAX5112_02702</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71058.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672259.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02702"/>
    <dbReference type="EnsemblBacteria" id="CTQ71058">
        <property type="protein sequence ID" value="CTQ71058"/>
        <property type="gene ID" value="LAX5112_02702"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ71058.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="304" mass="33366" checksum="E888CAFD20C07671" modified="2015-12-09" version="1">MELRQLRCFIAVADTLHFGRAAQKLNILPASLGRHIKMLEDSLGSRLLTRTTRSVVLTQSGSEFLAAARDIVERADKLEASFRESQRDKTSVLRIGAIDSAAVGLIPQIIPHFREAYPGVDIQLLEQKTIRLLPRLLTGRLDVAIVRPPEIVDQRLMLKSLFHETAVVAVPSSHPLAAKEKISVEDMADEPLIVPDKGSRPHSHDLTIKLFLEAGLSARVAQIAEEKQTIVNLVSTGVGIAIVPRWISRLAVGGVKFVSLDLPSGSARTRLALSVALVRDTRDTARDAFLEILHQQTEQLTLSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7P0</accession>
    <name>A0A0M7A7P0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Acetate transporter ActP</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">actP_2</name>
        <name evidence="8" type="ORF">LAX5112_02557</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70637.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672156.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02557"/>
    <dbReference type="EnsemblBacteria" id="CTQ70637">
        <property type="protein sequence ID" value="CTQ70637"/>
        <property type="gene ID" value="LAX5112_02557"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1730.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038377">
        <property type="entry name" value="Na/Glc_symporter_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001734">
        <property type="entry name" value="Na/solute_symporter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019899">
        <property type="entry name" value="Na/solute_symporter_VC_2705"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00474">
        <property type="entry name" value="SSF"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03648">
        <property type="entry name" value="Na_symport_lg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50283">
        <property type="entry name" value="NA_SOLUT_SYMP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="6"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="77"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="116"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="153"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="182"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="247"/>
            <end position="269"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="281"/>
            <end position="302"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="400"/>
            <end position="424"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="445"/>
            <end position="465"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="471"/>
            <end position="491"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="503"/>
            <end position="521"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="541"/>
            <end position="564"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU362091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ70637.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="594" mass="62898" checksum="B8841E6A818F26B7" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7U2</accession>
    <name>A0A0M7A7U2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Alkanal monooxygenase alpha chain</fullName>
            <ecNumber evidence="3">1.14.14.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">luxA_1</name>
        <name evidence="3" type="ORF">LAX5112_02663</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">To bacterial alkanal monooxygenase alpha and beta chains.</text>
    </comment>
    <dbReference type="EC" id="1.14.14.3" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70949.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672231.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02663"/>
    <dbReference type="EnsemblBacteria" id="CTQ70949">
        <property type="protein sequence ID" value="CTQ70949"/>
        <property type="gene ID" value="LAX5112_02663"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047646">
        <property type="term" value="F:alkanal monooxygenase (FMN-linked) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011251">
        <property type="entry name" value="Luciferase-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036661">
        <property type="entry name" value="Luciferase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019949">
        <property type="entry name" value="Luciferase_OxRdatse_group-1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00296">
        <property type="entry name" value="Bac_luciferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51679">
        <property type="entry name" value="SSF51679"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03558">
        <property type="entry name" value="oxido_grp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0503">Monooxygenase</keyword>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Bac_luciferase" evidence="2">
        <location>
            <begin position="14"/>
            <end position="290"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007789"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00296"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ70949.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="335" mass="36044" checksum="86248FECD254603D" modified="2015-12-09" version="1">MHKFSLLDLSPIPEGKTAADALNNSVELAQLAENNGFHRFWLAEHHNMPGIASAATAVVIGHVAGATSTIRVGAGGIMLPNHAPLVVAEQFGTLATLYPGRIDLGLGRAPGTDMATARALRRHMAPDDTFPQDVQELLAYFADEAESGRVRAIPGAGIHVPVWILGSSLYGAQLAAHYGLPYAFASHFAPDMLEEALTIYRAQFQPSRYLDQPYAVMAAGVCAAASDEEAQYLRSSQYLAFARLRTGRPGKLPYPVEDLSPEIPAPVLAQVKHALSCSATGSPETVHVQIQNLLDRYKPDELMVTGMIHDHKARLRSFEIAGAALRDLQVKPQAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9F2</accession>
    <name>A0A0M7A9F2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative signal peptide peptidase SppA</fullName>
            <ecNumber evidence="2">3.4.21.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">sppA_1</name>
        <name evidence="2" type="ORF">LAX5112_02433</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.4.21.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70254.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672037.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02433"/>
    <dbReference type="EnsemblBacteria" id="CTQ70254">
        <property type="protein sequence ID" value="CTQ70254"/>
        <property type="gene ID" value="LAX5112_02433"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004176">
        <property type="term" value="F:ATP-dependent peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004252">
        <property type="term" value="F:serine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07023">
        <property type="entry name" value="S49_Sppa_N_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001907">
        <property type="entry name" value="ClpP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029045">
        <property type="entry name" value="ClpP/crotonase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002142">
        <property type="entry name" value="Peptidase_S49"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01343">
        <property type="entry name" value="Peptidase_S49"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00127">
        <property type="entry name" value="CLPPROTEASEP"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52096">
        <property type="entry name" value="SSF52096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidase_S49" evidence="1">
        <location>
            <begin position="86"/>
            <end position="229"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01343"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70254.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="285" mass="30591" checksum="140D18C4092AECC2" modified="2015-12-09" version="1">MLSSLRRFLPGFLKNDAPIIPVVRLQGPIGMSSPLRPGLSLATAALPLERAFSMKKAPAVALIVNSPGGSPVQSRLIFQRIRDLAKENEKDVLVFVEDVAASGGYMIALAGDEIIVDPSSVVGSIGVVAAGFGFTELIGKIGVERRVYTAGEKKVTLDPFQPEVPEDIEYLKTLQQEIHDTFIDMVKSRRADVLSDEPDLFTGKFWTGSSAVNIGLVDSLGDLRGVLKKRYGDKAEAKLISAPRGLFGRKGGVGVNLEAGTLTAGLGNELISAAEERLMWQRFGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AA07</accession>
    <name>A0A0M7AA07_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Phosphocarrier protein NPr</fullName>
            <ecNumber evidence="2">2.7.11.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ptsO</name>
        <name evidence="2" type="ORF">LAX5112_02912</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.7.11.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71699.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008193177.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02912"/>
    <dbReference type="EnsemblBacteria" id="CTQ71699">
        <property type="protein sequence ID" value="CTQ71699"/>
        <property type="gene ID" value="LAX5112_02912"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00367">
        <property type="entry name" value="PTS-HPr_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1340.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000032">
        <property type="entry name" value="HPr-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035895">
        <property type="entry name" value="HPr-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001020">
        <property type="entry name" value="PTS_HPr_His_P_site"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00381">
        <property type="entry name" value="PTS-HPr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00107">
        <property type="entry name" value="PHOSPHOCPHPR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55594">
        <property type="entry name" value="SSF55594"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01003">
        <property type="entry name" value="PTS_HPr_family"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51350">
        <property type="entry name" value="PTS_HPR_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00369">
        <property type="entry name" value="PTS_HPR_HIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="HPr" evidence="1">
        <location>
            <begin position="1"/>
            <end position="88"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51350"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71699.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="89" mass="9407" checksum="470C93A06EF3865A" modified="2015-12-09" version="1">MLEKDLTIVNRRGLHARASAKLVKLVETFDADVKVSRDGQTVGGTSIMGLMMLAASPGCCIKVRTSGVQAEPALEAITDLVESGFGEED</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAG8</accession>
    <name>A0A0M7AAG8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Biotin biosynthesis protein BioC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02831</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71462.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672362.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02831"/>
    <dbReference type="EnsemblBacteria" id="CTQ71462">
        <property type="protein sequence ID" value="CTQ71462"/>
        <property type="gene ID" value="LAX5112_02831"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041698">
        <property type="entry name" value="Methyltransf_25"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13649">
        <property type="entry name" value="Methyltransf_25"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Methyltransf_25" evidence="1">
        <location>
            <begin position="62"/>
            <end position="159"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13649"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71462.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="248" mass="28039" checksum="D28111B50E6F5F46" modified="2015-12-09" version="1">MIKAHDPAATPVATDLDPATIFETDWQIYRTLVDNNLLFHQEVSDVLVREITARFSAGFRFLDLACGDADVMSRALRKTTVDHYLGVDLSPQALEIAAKNMEDAPFDARLEQMDILTTLFENPGTYDVIWCGLCLHHFQSIEEKTEVFSAIRSALSSNGVFFSFEPVLPEGVSLGSYNRQNRQKFREDWSPPLTELQFERLMTHIETCDFPETAHGWLTAGRAAGFSTAEELFAIPNGGYCRLFRFEQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAP9</accession>
    <name>A0A0M7AAP9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Leucine/isoleucine/valine transporter permease subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_03104</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72225.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672584.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03104"/>
    <dbReference type="EnsemblBacteria" id="CTQ72225">
        <property type="protein sequence ID" value="CTQ72225"/>
        <property type="gene ID" value="LAX5112_03104"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015658">
        <property type="term" value="F:branched-chain amino acid transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06581">
        <property type="entry name" value="TM_PBP1_LivM_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001851">
        <property type="entry name" value="ABC_transp_permease"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043428">
        <property type="entry name" value="LivM-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30482">
        <property type="entry name" value="PTHR30482"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02653">
        <property type="entry name" value="BPD_transp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="27"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="50"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="76"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="104"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="130"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="183"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="234"/>
            <end position="256"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="268"/>
            <end position="301"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="313"/>
            <end position="335"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ72225.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="358" mass="39041" checksum="861C0286D26B3994" modified="2015-12-09" version="1">MFYREAGQFKTSYQSDQALMPIRQDRIGLAAILLIAFVAVPAFANDFFLTSIMIPFLVFSLAAIGLNVLTGFCGQLSLGTGAFMGVGAYAAYKLTTIFPDANVILMVLLSGIFSAGVGAIFGLPSLRIKGLYLAVTTLAAQFFLEWCFIRIPWLYNYNASGAIEVPHREAFGVVVSGAESTPLVRYFIVLTITVGIAVLMANVLRGRIGRSWMMIRDMDIAAELMGIRPLQTKLLAFAVSSYICGVAGAMMVFFWLNAAEPSSYSIQLSFQVLFMVILGGLGSLGGAFMGAAFIWILPVFLKFIPGVLGIDVAAEAVEHVTFMIVGALIIFFLIVEPHGFARLWQIGKQKLRVWPFPY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAS7</accession>
    <name>A0A0M7AAS7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">2-oxoglutarate dehydrogenase E1 component</fullName>
            <ecNumber evidence="5">1.2.4.2</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">Alpha-ketoglutarate dehydrogenase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="primary">sucA</name>
        <name evidence="11" type="ORF">LAX5112_02869</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">E1 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the decarboxylation of 2-oxoglutarate, the first step in the conversion of 2-oxoglutarate to succinyl-CoA and CO(2).</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>thiamine diphosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58937"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="4">Homodimer. Part of the 2-oxoglutarate dehydrogenase (OGDH) complex composed of E1 (2-oxoglutarate dehydrogenase), E2 (dihydrolipoamide succinyltransferase) and E3 (dihydrolipoamide dehydrogenase); the complex contains multiple copies of the three enzymatic components (E1, E2 and E3).</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the alpha-ketoglutarate dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.2.4.2" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71572.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008191149.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02869"/>
    <dbReference type="EnsemblBacteria" id="CTQ71572">
        <property type="protein sequence ID" value="CTQ71572"/>
        <property type="gene ID" value="LAX5112_02869"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004591">
        <property type="term" value="F:oxoglutarate dehydrogenase (succinyl-transferring) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030976">
        <property type="term" value="F:thiamine pyrophosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006099">
        <property type="term" value="P:tricarboxylic acid cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.11610">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032106">
        <property type="entry name" value="2-oxogl_dehyd_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011603">
        <property type="entry name" value="2oxoglutarate_DH_E1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001017">
        <property type="entry name" value="DH_E1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031717">
        <property type="entry name" value="KGD_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042179">
        <property type="entry name" value="KGD_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029061">
        <property type="entry name" value="THDP-binding"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005475">
        <property type="entry name" value="Transketolase-like_Pyr-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23152">
        <property type="entry name" value="PTHR23152"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16078">
        <property type="entry name" value="2-oxogl_dehyd_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00676">
        <property type="entry name" value="E1_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16870">
        <property type="entry name" value="OxoGdeHyase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02779">
        <property type="entry name" value="Transket_pyr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000157">
        <property type="entry name" value="Oxoglu_dh_E1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00861">
        <property type="entry name" value="Transket_pyr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52518">
        <property type="entry name" value="SSF52518"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00239">
        <property type="entry name" value="2oxo_dh_E1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 11" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0786">Thiamine pyrophosphate</keyword>
    <feature type="domain" description="Transket_pyr" evidence="10">
        <location>
            <begin position="641"/>
            <end position="834"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001964"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00003906"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011301"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012280"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00013321"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00030680"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="SMART" id="SM00861"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ71572.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="995" mass="112451" checksum="E84951CCD237DB5C" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABA7</accession>
    <name>A0A0M7ABA7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 10">Succinate dehydrogenase iron-sulfur subunit</fullName>
            <ecNumber evidence="10">1.3.5.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">sdhB</name>
        <name evidence="13" type="ORF">LAX5112_02841</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>a quinone + succinate = a quinol + fumarate</text>
            <dbReference type="Rhea" id="RHEA:40523"/>
            <dbReference type="ChEBI" id="CHEBI:24646"/>
            <dbReference type="ChEBI" id="CHEBI:29806"/>
            <dbReference type="ChEBI" id="CHEBI:30031"/>
            <dbReference type="ChEBI" id="CHEBI:132124"/>
            <dbReference type="EC" id="1.3.5.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="10">
            <name>2Fe-2S cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49601"/>
        </cofactor>
        <text evidence="10">Binds 1 [2Fe-2S] cluster.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="10">
            <name>[3Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:21137"/>
        </cofactor>
        <text evidence="10">Binds 1 [3Fe-4S] cluster.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="10">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
        <text evidence="10">Binds 1 [4Fe-4S] cluster.</text>
    </comment>
    <comment type="pathway">
        <text evidence="1">Carbohydrate metabolism; tricarboxylic acid cycle; fumarate from succinate (bacterial route): step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">Part of an enzyme complex containing four subunits: a flavoprotein, an iron-sulfur, cytochrome b-556, and a hydrophobic anchor protein.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 10">Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.</text>
    </comment>
    <dbReference type="EC" id="1.3.5.1" evidence="10"/>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71490.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008189735.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02841"/>
    <dbReference type="EnsemblBacteria" id="CTQ71490">
        <property type="protein sequence ID" value="CTQ71490"/>
        <property type="gene ID" value="LAX5112_02841"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00223">
        <property type="reaction ID" value="UER01005"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051537">
        <property type="term" value="F:2 iron, 2 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051538">
        <property type="term" value="F:3 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008177">
        <property type="term" value="F:succinate dehydrogenase (ubiquinone) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006099">
        <property type="term" value="P:tricarboxylic acid cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1060.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036010">
        <property type="entry name" value="2Fe-2S_ferredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001041">
        <property type="entry name" value="2Fe-2S_ferredoxin-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006058">
        <property type="entry name" value="2Fe2S_fd_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017896">
        <property type="entry name" value="4Fe4S_Fe-S-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017900">
        <property type="entry name" value="4Fe4S_Fe_S_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012675">
        <property type="entry name" value="Beta-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009051">
        <property type="entry name" value="Helical_ferredxn"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004489">
        <property type="entry name" value="Succ_DH/fum_Rdtase_Fe-S"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025192">
        <property type="entry name" value="Succ_DH/fum_Rdtase_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13085">
        <property type="entry name" value="Fer2_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54292">
        <property type="entry name" value="SSF54292"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00384">
        <property type="entry name" value="dhsB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00197">
        <property type="entry name" value="2FE2S_FER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51085">
        <property type="entry name" value="2FE2S_FER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00198">
        <property type="entry name" value="4FE4S_FER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51379">
        <property type="entry name" value="4FE4S_FER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0001">2Fe-2S</keyword>
    <keyword evidence="9 10" id="KW-0003">3Fe-4S</keyword>
    <keyword evidence="10" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="7 10" id="KW-0408">Iron</keyword>
    <keyword evidence="8 10" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="6 10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0816">Tricarboxylic acid cycle</keyword>
    <feature type="domain" description="2Fe-2S ferredoxin-type" evidence="11">
        <location>
            <begin position="30"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="12">
        <location>
            <begin position="161"/>
            <end position="191"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004894"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009433"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022131"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022532"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023291"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU361237"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS51085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS51379"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="CTQ71490.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="260" mass="29820" checksum="46E29371EC9AB48D" modified="2015-12-09" version="1">MVQLTLPRNSQVTDGKVWDKPEGATNLTEYRIYRWNPDEGKNPSVDTYFVNRDDCGPMVLDGLIYIKNKIDPTLTFRRSCREGICGSCAMNIDGTNTLACTKGMEEIAGDVVKIYPLPHMPVVKDLVPDMTRFYAQHRSIEPWLKTVTPAPEKEWRQSHEDRQKLDGLYECILCACCSTSCPSYWWNGDRYLGPAILLQAYRWLIDSRDEATGERLDNLEDPFRLYRCHTIMNCSQACPKGLNPAKAIAEIKKMMVERRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABP6</accession>
    <name>A0A0M7ABP6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Pseudouridine synthase</fullName>
            <ecNumber evidence="3">5.4.99.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">rluD</name>
        <name evidence="5" type="ORF">LAX5112_03213</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Responsible for synthesis of pseudouridine from uracil.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>a uridine in RNA = a pseudouridine in RNA</text>
            <dbReference type="Rhea" id="RHEA:48348"/>
            <dbReference type="Rhea" id="RHEA-COMP:12068"/>
            <dbReference type="Rhea" id="RHEA-COMP:12069"/>
            <dbReference type="ChEBI" id="CHEBI:65314"/>
            <dbReference type="ChEBI" id="CHEBI:65315"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the pseudouridine synthase RluA family.</text>
    </comment>
    <dbReference type="EC" id="5.4.99.-" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72528.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672645.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03213"/>
    <dbReference type="EnsemblBacteria" id="CTQ72528">
        <property type="protein sequence ID" value="CTQ72528"/>
        <property type="gene ID" value="LAX5112_03213"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0120159">
        <property type="term" value="F:rRNA pseudouridine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000455">
        <property type="term" value="P:enzyme-directed rRNA pseudouridine synthesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="CDD" id="cd02869">
        <property type="entry name" value="PseudoU_synth_RluA_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00165">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.290.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020103">
        <property type="entry name" value="PsdUridine_synth_cat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006225">
        <property type="entry name" value="PsdUridine_synth_RluC/D"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006224">
        <property type="entry name" value="PsdUridine_synth_RluC/D_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006145">
        <property type="entry name" value="PsdUridine_synth_RsuA/RluA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002942">
        <property type="entry name" value="S4_RNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036986">
        <property type="entry name" value="S4_RNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00849">
        <property type="entry name" value="PseudoU_synth_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01479">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00363">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55120">
        <property type="entry name" value="SSF55120"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00005">
        <property type="entry name" value="rluA_subfam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01129">
        <property type="entry name" value="PSI_RLU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0413">Isomerase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="S4" evidence="4">
        <location>
            <begin position="27"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="active site" evidence="2">
        <location>
            <position position="152"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010876"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR606225-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU362028"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ72528.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="341" mass="36819" checksum="A00217EBF940F502" modified="2015-12-09" version="1">MTDNSQDDPASFDADFILTVDSEDAGKRIDAVLASHLETLSRNRIQSLIKAGDVSIGGAKIGEPKYRVNEGDEITLHLPEPEDPDPKGEDIPLSVVFEDAHVIVIDKPAGLVVHPGAGNWTGTLVNALIHHCGDSLSGIGGVKRPGIVHRIDKDTSGLLVVAKTDQAHQGLAAQFADHGRTGPLERAYSALVWGAPSSLKGTIDANLARSQANRQKMAVVKTSGRHAITHWQVKERFGAADQPPLASLMECRLETGRTHQIRVHMAHIGHPLLGDDDYGSGFKTKINRLEEPLKSLVGGFTRQALHAGLLAFEHPVSGETLRFESPYPDDFANLLHGLQKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABV9</accession>
    <name>A0A0M7ABV9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Reaction center protein L chain</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="15">Photosynthetic reaction center L subunit</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="18" type="primary">pufL</name>
        <name evidence="18" type="ORF">LAX5112_02961</name>
    </gene>
    <organism evidence="18 19">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="19" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="19">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 16">Belongs to the reaction center PufL/M/PsbA/D family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71886.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008192657.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02961"/>
    <dbReference type="EnsemblBacteria" id="CTQ71886">
        <property type="protein sequence ID" value="CTQ71886"/>
        <property type="gene ID" value="LAX5112_02961"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030077">
        <property type="term" value="C:plasma membrane light-harvesting complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042314">
        <property type="term" value="F:bacteriochlorophyll binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045156">
        <property type="term" value="F:electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009772">
        <property type="term" value="P:photosynthetic electron transport in photosystem II"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd09290">
        <property type="entry name" value="Photo-RC_L"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.85.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036854">
        <property type="entry name" value="Photo_II_D1/D2_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005871">
        <property type="entry name" value="Photo_RC_L"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000484">
        <property type="entry name" value="Photo_RC_L/M"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00124">
        <property type="entry name" value="Photo_RC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00256">
        <property type="entry name" value="REACTNCENTRE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81483">
        <property type="entry name" value="SSF81483"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01157">
        <property type="entry name" value="pufL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00244">
        <property type="entry name" value="REACTION_CENTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11" id="KW-0076">Bacteriochlorophyll</keyword>
    <keyword evidence="6" id="KW-0148">Chlorophyll</keyword>
    <keyword evidence="13" id="KW-0157">Chromophore</keyword>
    <keyword evidence="10" id="KW-0460">Magnesium</keyword>
    <keyword evidence="14 17" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-0602">Photosynthesis</keyword>
    <keyword evidence="5" id="KW-0674">Reaction center</keyword>
    <keyword evidence="19" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 17" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="12 17" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="17">
        <location>
            <begin position="30"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="17">
        <location>
            <begin position="115"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="17">
        <location>
            <begin position="173"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="17">
        <location>
            <begin position="240"/>
            <end position="263"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002611"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00021599"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022469"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022494"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022531"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022956"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00022991"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00033393"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="RuleBase" id="RU004331"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="EMBL" id="CTQ71886.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="281" mass="31271" checksum="3FB7FFDDF6DA9892" modified="2015-12-09" version="1">MALLSFERKYRVRGGTLIGGDLFDFWVGPFYVGFFGITGAFFTFLGTALIIYGAAIGPTWNIWQISIAPPDISYGLALAPLKEGGLWQIITICALGSFGSWALREVEICRKLGMGYHVPFAFSFAIFAYATLVVFRPLLLGAWGHGFPYGIFSHLDWVSNVGYQYLHFHYNPAHMIAVTFFFTTTLALSLHGGLILSAANPGESMEGGGKQAEVKTPEYEDTFFRDIIGYSIGTLGIHRLGLILALNAGFWSAVCIVISGPFWNQGWPQWWNWWLNLPIWS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AC10</accession>
    <name>A0A0M7AC10_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Methyltransferase</fullName>
            <ecNumber evidence="4">2.1.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">LAX5112_03253</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the trimethylamine methyltransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.-" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72638.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672673.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03253"/>
    <dbReference type="EnsemblBacteria" id="CTQ72638">
        <property type="protein sequence ID" value="CTQ72638"/>
        <property type="gene ID" value="LAX5112_03253"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015948">
        <property type="term" value="P:methanogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.480">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038601">
        <property type="entry name" value="MttB-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010426">
        <property type="entry name" value="MTTB_MeTrfase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06253">
        <property type="entry name" value="MTTB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF037567">
        <property type="entry name" value="MTTB_MeTrfase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 6" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4 6" id="KW-0808">Transferase</keyword>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="13"/>
            <end position="28"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007137"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRNR" id="PIRNR037567"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ72638.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="526" mass="57361" checksum="5F4FF2EA5D5BED4F" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AC28</accession>
    <name>A0A0M7AC28_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Nitrogen regulation protein C</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">nreC</name>
        <name evidence="5" type="ORF">LAX5112_03094</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72197.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03094"/>
    <dbReference type="EnsemblBacteria" id="CTQ72197">
        <property type="protein sequence ID" value="CTQ72197"/>
        <property type="gene ID" value="LAX5112_03094"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06170">
        <property type="entry name" value="LuxR_C_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016032">
        <property type="entry name" value="Sig_transdc_resp-reg_C-effctor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000792">
        <property type="entry name" value="Tscrpt_reg_LuxR_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00196">
        <property type="entry name" value="GerE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00038">
        <property type="entry name" value="HTHLUXR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00421">
        <property type="entry name" value="HTH_LUXR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46894">
        <property type="entry name" value="SSF46894"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00622">
        <property type="entry name" value="HTH_LUXR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50043">
        <property type="entry name" value="HTH_LUXR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="4">
        <location>
            <begin position="6"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="domain" description="HTH luxR-type" evidence="3">
        <location>
            <begin position="144"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="2">
        <location>
            <position position="57"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ72197.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="212" mass="22819" checksum="04135104CE385240" modified="2015-12-09" version="1">MTKPIRVLLADDHALVRDGIRARLNKVPEIEVVGEATNGREAVKLAHELRPDVLLMDVSMPVMNGLEAAAEVRKSFPEIAVLILSIYDNSEYVRGVVQAGARGYILKDISAPEMITAISSVASGGYYFSSAVGPTLVGTATSAPIEDPYGLTDRERQVLTAIAKGLPNKEVAKSLGISVRTVESHRLNLREKVGNKNAAQLYKVAQDLGLLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACH0</accession>
    <name>A0A0M7ACH0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative ubiquinone biosynthesis protein UbiB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ubiB_2</name>
        <name evidence="2" type="ORF">LAX5112_03143</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72331.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672608.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03143"/>
    <dbReference type="EnsemblBacteria" id="CTQ72331">
        <property type="protein sequence ID" value="CTQ72331"/>
        <property type="gene ID" value="LAX5112_03143"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd13970">
        <property type="entry name" value="ABC1_ADCK3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004147">
        <property type="entry name" value="ABC1_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034646">
        <property type="entry name" value="ADCK3_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03109">
        <property type="entry name" value="ABC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="SSF56112"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0830">Ubiquinone</keyword>
    <feature type="domain" description="ABC1" evidence="1">
        <location>
            <begin position="87"/>
            <end position="330"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72331.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="459" mass="51233" checksum="2178BE01F32EDF2E" modified="2015-12-09" version="1">MPQDKDRESNRFSARMGRYARVGTNVGGIAAKVAGAKLLGMDLDNGKNASELAAALGGLKGPLMKVAQLLSTIPDALPPEYTTELAKLQASAPPMGWAFVKRRMRAELGAGWEKRFESFEREPAAAASLGQVHRAAGHDGRVLACKLQYPDMASAVEADLKQLQMLFSLHRRMKPAIDTSEIAKEISARVREELDYGREAGHIGLYKQILEDAPHIRVPDVVPDLSTKRLLTMNWLHGRPLLDFKEHDQEDRNRLARTMFHAWWHPFSRYGVIHGDPHLGNYTVFEEDGVPSGINLLDYGCIRIFPEAFVEGVVELYKGLLEEDNDRVVAAYERWGFQNLKKEVIEVLNIWARFIYGPLLTDRVRSIADGVSAAEYGRKEAFRVHSALKELGPVTVPQEFVFMDRAAIGLGGVFLHLRAELNFFQLFNEQIDGFEASTVRNRQETALEAAGLLEAGRAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACM4</accession>
    <name>A0A0M7ACM4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Extracytoplasmic solute receptor protein</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">TRAP transporter</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="primary">yiaO_5</name>
        <name evidence="7" type="ORF">LAX5112_03096</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Part of the tripartite ATP-independent periplasmic (TRAP) transport system.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the bacterial solute-binding protein 7 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72202.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672577.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03096"/>
    <dbReference type="EnsemblBacteria" id="CTQ72202">
        <property type="protein sequence ID" value="CTQ72202"/>
        <property type="gene ID" value="LAX5112_03096"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031317">
        <property type="term" value="C:tripartite ATP-independent periplasmic transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071702">
        <property type="term" value="P:organic substance transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.190.170">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018389">
        <property type="entry name" value="DctP_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026289">
        <property type="entry name" value="SBP_TakP-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006311">
        <property type="entry name" value="TAT_signal"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038404">
        <property type="entry name" value="TRAP_DctP_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33376">
        <property type="entry name" value="PTHR33376"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03480">
        <property type="entry name" value="DctP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF039026">
        <property type="entry name" value="SiaP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3" id="KW-0574">Periplasm</keyword>
    <keyword evidence="7" id="KW-0675">Receptor</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="6">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809585" description="Extracytoplasmic solute receptor protein" evidence="6">
        <location>
            <begin position="25"/>
            <end position="366"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4 5">
        <location>
            <position position="157"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="178"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="215"/>
        </location>
        <ligand>
            <name>a metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:25213"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="241"/>
        </location>
        <ligand>
            <name>a metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:25213"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRNR" id="PIRNR039026"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR039026-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR039026-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ72202.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="366" mass="39733" checksum="2CDB6BD0BC6EEEFC" modified="2015-12-09" version="1">MDRRSFIKKAGLGAGGIAAGSALAAPAIAQGTKDMVIVSTWPRDFPGLGIPAQRLAARIAELTEGRINVQYFAAGERVGAFDSFDEVASGNAQAYIGADYYWKGKHPGWAAFTAVPFGLTYTEMDAWIKFGGGQELWDELAGEFGLKNFAMGNTGVQMGGWFNKEIETADDLKGLKMRIPGQGGDVMAKLGASPVSLPGGQIYENLVSGAIDATEWVGPFNDYFMKFYEAAKYYYYPGMHEPGAQLAMGINKAWWDTLDATDQAIIAAACNEENALTMAETNANNGVYLNRLINEHGVELREFNDEIYDAFGEAAQEVLEEAMDHSPMAKKIFESFINARKDIGSWMAISDVAYSNKRNAVLGIPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACM8</accession>
    <name>A0A0M7ACM8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">4-hydroxy-tetrahydrodipicolinate reductase</fullName>
            <shortName evidence="9">HTPA reductase</shortName>
            <ecNumber evidence="9">1.17.1.8</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9 12" type="primary">dapB</name>
        <name evidence="12" type="ORF">LAX5112_02810</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>(S)-2,3,4,5-tetrahydrodipicolinate + H2O + NAD(+) = (2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate + H(+) + NADH</text>
            <dbReference type="Rhea" id="RHEA:35323"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16845"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:67139"/>
            <dbReference type="EC" id="1.17.1.8"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>(S)-2,3,4,5-tetrahydrodipicolinate + H2O + NADP(+) = (2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate + H(+) + NADPH</text>
            <dbReference type="Rhea" id="RHEA:35331"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16845"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="ChEBI" id="CHEBI:67139"/>
            <dbReference type="EC" id="1.17.1.8"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="9">Amino-acid biosynthesis; L-lysine biosynthesis via DAP pathway; (S)-tetrahydrodipicolinate from L-aspartate: step 4/4.</text>
    </comment>
    <comment type="subunit">
        <text evidence="9">Homotetramer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 9">Belongs to the DapB family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">Was originally thought to be a dihydrodipicolinate reductase (DHDPR), catalyzing the conversion of dihydrodipicolinate to tetrahydrodipicolinate. However, it was shown in E.coli that the substrate of the enzymatic reaction is not dihydrodipicolinate (DHDP) but in fact (2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinic acid (HTPA), the product released by the DapA-catalyzed reaction.</text>
    </comment>
    <dbReference type="EC" id="1.17.1.8" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71404.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02810"/>
    <dbReference type="EnsemblBacteria" id="CTQ71404">
        <property type="protein sequence ID" value="CTQ71404"/>
        <property type="gene ID" value="LAX5112_02810"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00034">
        <property type="reaction ID" value="UER00018"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008839">
        <property type="term" value="F:4-hydroxy-tetrahydrodipicolinate reductase"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050661">
        <property type="term" value="F:NADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016726">
        <property type="term" value="F:oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019877">
        <property type="term" value="P:diaminopimelate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009089">
        <property type="term" value="P:lysine biosynthetic process via diaminopimelate"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00102">
        <property type="entry name" value="DapB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022663">
        <property type="entry name" value="DapB_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000846">
        <property type="entry name" value="DapB_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022664">
        <property type="entry name" value="DapB_N_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023940">
        <property type="entry name" value="DHDPR_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20836">
        <property type="entry name" value="PTHR20836"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05173">
        <property type="entry name" value="DapB_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01113">
        <property type="entry name" value="DapB_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000161">
        <property type="entry name" value="DHPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00036">
        <property type="entry name" value="dapB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01298">
        <property type="entry name" value="DAPB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 9" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="2 9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 9" id="KW-0220">Diaminopimelate biosynthesis</keyword>
    <keyword evidence="8 9" id="KW-0457">Lysine biosynthesis</keyword>
    <keyword evidence="7 9" id="KW-0520">NAD</keyword>
    <keyword evidence="4 9" id="KW-0521">NADP</keyword>
    <keyword evidence="6 9 12" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DapB_N" evidence="10">
        <location>
            <begin position="1"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="domain" description="DapB_C" evidence="11">
        <location>
            <begin position="127"/>
            <end position="263"/>
        </location>
    </feature>
    <feature type="region of interest" description="(S)-2,3,4,5-tetrahydrodipicolinate binding" evidence="9">
        <location>
            <begin position="164"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor/acceptor" evidence="9">
        <location>
            <position position="154"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="9">
        <location>
            <position position="158"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="7"/>
            <end position="12"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="97"/>
            <end position="99"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="121"/>
            <end position="124"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="155"/>
        </location>
        <ligand>
            <name>(S)-2,3,4,5-tetrahydrodipicolinate</name>
            <dbReference type="ChEBI" id="CHEBI:16845"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006642"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022915"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023154"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF01113"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF05173"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ71404.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="267" mass="27966" checksum="4F7EE7B341F7190A" modified="2015-12-09" version="1">MRLVVVGAGGRMGRALTRAVTDAAGADVAAAIEQEGSPFLGQDVGELAGVGALNVPVTDDPLSAFAKADGVLDFTAPKASIWFAELAAQARIVHVIGTTGWTPEEETPLRAAARHARIIKSGNMSLGVNLLASLVRKAAAALDADFDIEVLEMHHKHKVDAPSGTALLLGEAAAEGRGIDLQTHSVRSRDGIMDPRKTGDIGFATLRGGSVIGEHSVIFAGEGERIELTHRAEDRQLFARGAVKAALWGFDQKPGFYSMADVLGLDT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AD68</accession>
    <name>A0A0M7AD68_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">N(G),N(G)-dimethylarginine dimethylaminohydrolase</fullName>
            <ecNumber evidence="5">3.5.3.18</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">LAX5112_03409</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the DDAH family.</text>
    </comment>
    <dbReference type="EC" id="3.5.3.18" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ73028.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672808.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03409"/>
    <dbReference type="EnsemblBacteria" id="CTQ73028">
        <property type="protein sequence ID" value="CTQ73028"/>
        <property type="gene ID" value="LAX5112_03409"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016403">
        <property type="term" value="F:dimethylargininase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033199">
        <property type="entry name" value="DDAH"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12737">
        <property type="entry name" value="PTHR12737"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Substrate binding" evidence="4">
        <location>
            <begin position="74"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="3">
        <location>
            <position position="171"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="3">
        <location>
            <position position="258"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="27"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="69"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="94"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="140"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="252"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008532"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR633199-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR633199-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ73028.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="268" mass="28519" checksum="B3B5CA4E4C48CC03" modified="2015-12-09" version="1">MVARAGLSYRFTHAITRKPADSVANGLRAVDTGDPSGAAFRAEHELYVKALQDAGLTVDVLPQLESYPDSCFVEDPAFCLPEGAIQLRPGTASREGEGKEIRAALDARFDKVVELPGSGYVDGGDILMLDDVILIGLSARTNREGADAFAQLLNEWGYNAEVCETPEGVLHFKTACSTLGEGVILATEVMAKSGFFGERKVVVVPDGEDYAANVIRVNDVVLVPEGYPKTLAAIETSGFKTVVLPTHEARKVDGGLSCLSLRFASKAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADA2</accession>
    <name>A0A0M7ADA2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Periplasmic murein peptide-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">mppA</name>
        <name evidence="7" type="ORF">LAX5112_03337</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the bacterial solute-binding protein 5 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72859.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672753.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03337"/>
    <dbReference type="EnsemblBacteria" id="CTQ72859">
        <property type="protein sequence ID" value="CTQ72859"/>
        <property type="gene ID" value="LAX5112_03337"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030288">
        <property type="term" value="C:outer membrane-bounded periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030678">
        <property type="entry name" value="Peptide/Ni-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039424">
        <property type="entry name" value="SBP_5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023765">
        <property type="entry name" value="SBP_5_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000914">
        <property type="entry name" value="SBP_5_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30290">
        <property type="entry name" value="PTHR30290"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00496">
        <property type="entry name" value="SBP_bac_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002741">
        <property type="entry name" value="MppA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01040">
        <property type="entry name" value="SBP_BACTERIAL_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0574">Periplasm</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 5" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="5">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809360" evidence="5">
        <location>
            <begin position="25"/>
            <end position="528"/>
        </location>
    </feature>
    <feature type="domain" description="SBP_bac_5" evidence="6">
        <location>
            <begin position="68"/>
            <end position="446"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ72859.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="528" mass="58834" checksum="DA8EFA95D5548191" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEA1</accession>
    <name>A0A0M7AEA1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 5">30S ribosomal protein S2</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">rpsB_1</name>
        <name evidence="5" type="synonym">rpsB</name>
        <name evidence="7" type="ORF">LAX5112_03464</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 5 6">Belongs to the universal ribosomal protein uS2 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73219.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451945.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03464"/>
    <dbReference type="EnsemblBacteria" id="CTQ73219">
        <property type="protein sequence ID" value="CTQ73219"/>
        <property type="gene ID" value="LAX5112_03464"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015935">
        <property type="term" value="C:small ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01425">
        <property type="entry name" value="RPS2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00291_B">
        <property type="entry name" value="Ribosomal_S2_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001865">
        <property type="entry name" value="Ribosomal_S2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005706">
        <property type="entry name" value="Ribosomal_S2_bac/mit/plastid"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018130">
        <property type="entry name" value="Ribosomal_S2_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023591">
        <property type="entry name" value="Ribosomal_S2_flav_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12534">
        <property type="entry name" value="PTHR12534"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00318">
        <property type="entry name" value="Ribosomal_S2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00395">
        <property type="entry name" value="RIBOSOMALS2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52313">
        <property type="entry name" value="SSF52313"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01011">
        <property type="entry name" value="rpsB_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00962">
        <property type="entry name" value="RIBOSOMAL_S2_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00963">
        <property type="entry name" value="RIBOSOMAL_S2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5 6" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3 5 6" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00016777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00291"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003631"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ73219.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="269" mass="29070" checksum="31C8C64D7F2306E3" modified="2015-12-09" version="1">MALPDFTMRQLLEAGVHFGHQKHRWNPRMGQYIFGVRNDVHIMDLSQTVPLLHQALKAVSDTVAGGGRVLLVGTKRQAQDAVATSARNSAQYFVNARWLGGMLTNWKTISQSIQRLRKLEETLNSDAANALTKKERLFMDREREKLERNLGGIKDMGGIPDLIFVIDTNREAIAIQEARRLGIPVAAILDSNSSPEGITYPVPGNDDAGRALSLYCDLIARAAIDGISRAQGASGMDVGASEEAPVEEAIVEAAAEEAPAEAEAAAAQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEC7</accession>
    <name>A0A0M7AEC7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03285</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72756.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72756">
        <property type="protein sequence ID" value="CTQ72756"/>
        <property type="gene ID" value="LAX5112_03285"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ72756.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="187" mass="21348" checksum="9440BE6D59EBA0FE" modified="2015-12-09" version="1">MNTKCLDQDFPCQKPDYSNFDSIAASELCNPVSASAFVNGSPFCTMVPTDGEQQLGDLTHKSYLKGLRGKTGIYHLWIDYDNCDDHETNTMICVYVGKGLAEVRLDDHVKSKWPKNHCLYVTFTECDNRLAKYYEQLFLDTYSFVLNRNENPGTEKLYAVWSEELHMHGTELHQVSSLSNIQSLDDI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGZ5</accession>
    <name>A0A0M7AGZ5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Hopanoid-associated sugar epimerase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03633</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73712.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673015.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03633"/>
    <dbReference type="EnsemblBacteria" id="CTQ73712">
        <property type="protein sequence ID" value="CTQ73712"/>
        <property type="gene ID" value="LAX5112_03633"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016040">
        <property type="entry name" value="NAD(P)-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13460">
        <property type="entry name" value="NAD_binding_10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NAD(P)-bd_dom" evidence="1">
        <location>
            <begin position="14"/>
            <end position="132"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13460"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73712.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="326" mass="34777" checksum="66CB730973C9F42E" modified="2015-12-09" version="1">MSTPLNGKLVTVFGGSGFLGRHIVQALSKRGYRVRAAVRRPDLANHLQPLGAPGQIMAVQANLRHRWSVDRAVQGADAVVNAVGILAPTGKQSFDAVQAFGPRAIAEAARAAGLNGITHISAIGADPESASAYARSKAVGETGVLETLPDSIILRPSIVFGPEDNFFNQFAGMARISPVLPLVGGGETKFQPVYVCDIAEAVARAVDGTLQPGSVYELGGPEIKSFRDCLEDMLEVTQRSRVLLPIPFPVSEVMGKVMQYMPGSPLTADQVELLKKDNVVSEAAISERRTLSGIGIEPTTLAAILPSYLDRFREHGQYDAHKANRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHC4</accession>
    <name>A0A0M7AHC4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Putative GTP-binding protein YjiA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">yjiA</name>
        <name evidence="4" type="ORF">LAX5112_03739</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the SIMIBI class G3E GTPase family. CobW subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74047.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03739"/>
    <dbReference type="EnsemblBacteria" id="CTQ74047">
        <property type="protein sequence ID" value="CTQ74047"/>
        <property type="gene ID" value="LAX5112_03739"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1220.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011629">
        <property type="entry name" value="Cbl_biosynth_CobW-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036627">
        <property type="entry name" value="CobW-likC_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003495">
        <property type="entry name" value="CobW/HypB/UreG_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02492">
        <property type="entry name" value="cobW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07683">
        <property type="entry name" value="CobW_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00833">
        <property type="entry name" value="CobW_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CobW C-terminal" evidence="3">
        <location>
            <begin position="283"/>
            <end position="378"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="244"/>
            <end position="274"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="386"/>
            <end position="406"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="2">
        <location>
            <begin position="254"/>
            <end position="273"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ74047.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="406" mass="44587" checksum="A3C28211EB227029" modified="2015-12-09" version="1">MSVADASPVSEKPARGPKPPIPVSVLTGFLGAGKTTLLNRILQDPAMADTAVIINEFGEIGLDHLFVDQAGDGIVELSSGCLCCTIRGDLVTTLENLLRHLDNGRTERLTRVVIETTGLADPAPILHTIMLHPYLVMRYRLDSVVTLVDAVNGLSTLDEHEEAKKQAAVADRIVLTKTDLLNSEESQRSFSDLKSRLLALNPGARVLDTQTGEATPDTLFNAGLYNPESKIPDVANWLNAEAYEPNHHDHSHGHHHHDGDHHHGHHHHGHDHAHDINRHSDAIRAFTLSTDRPVSASALEMFLDLLRSAHGPKLLRVKGIVQLAEDPDRPVVIHGVQHVFHPPATLDAWPDEDRRTRMVFITKDLPEGFVRKMFEAFSGALRPDTPDSDAMLNNPLAVTGFTSPPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHJ6</accession>
    <name>A0A0M7AHJ6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Rut operon repressor</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">rutR_2</name>
        <name evidence="3" type="ORF">LAX5112_03922</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74615.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673224.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74615">
        <property type="protein sequence ID" value="CTQ74615"/>
        <property type="gene ID" value="LAX5112_03922"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041479">
        <property type="entry name" value="TetR_CgmR_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17937">
        <property type="entry name" value="TetR_C_28"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00440">
        <property type="entry name" value="TetR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00455">
        <property type="entry name" value="HTHTETR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50977">
        <property type="entry name" value="HTH_TETR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH tetR-type" evidence="2">
        <location>
            <begin position="6"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="1">
        <location>
            <begin position="29"/>
            <end position="48"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ74615.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="183" mass="19780" checksum="49234A9B22CB030D" modified="2015-12-09" version="1">MSKTTKNTKCQILTAALEVVRRAGSPALTLDAVAEEAGLSKGGLLYNFPSKDALIRGMVEFLAGKFEAEIAAARENAGGAASPTLAAMVDVTEGWLSEQRDVARAILPATADKPDLRQPFIDVKLRLRAAILKETSQLGAAWVIWTSLEGLHFSEAHCVSTLTDEDRTAVFEELRGRLKELNQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIH7</accession>
    <name>A0A0M7AIH7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Protein-export protein SecB</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3 4" type="primary">secB</name>
        <name evidence="4" type="ORF">LAX5112_03799</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">Homotetramer, a dimer of dimers. One homotetramer interacts with 1 SecA dimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the SecB family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74216.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008190507.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03799"/>
    <dbReference type="EnsemblBacteria" id="CTQ74216">
        <property type="protein sequence ID" value="CTQ74216"/>
        <property type="gene ID" value="LAX5112_03799"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051082">
        <property type="term" value="F:unfolded protein binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006457">
        <property type="term" value="P:protein folding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051262">
        <property type="term" value="P:protein tetramerization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015031">
        <property type="term" value="P:protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00821">
        <property type="entry name" value="SecB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003708">
        <property type="entry name" value="SecB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035958">
        <property type="entry name" value="SecB-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36918">
        <property type="entry name" value="PTHR36918"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02556">
        <property type="entry name" value="SecB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01594">
        <property type="entry name" value="SECBCHAPRONE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54611">
        <property type="entry name" value="SSF54611"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00809">
        <property type="entry name" value="secB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0143">Chaperone</keyword>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3" id="KW-0653">Protein transport</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0811">Translocation</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009990"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023010"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ74216.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="167" mass="18263" checksum="D480CB4D88EE95AA" modified="2015-12-09" version="1">MTDTNDGGAAPQAEGADAAPGMNILGQYIKDLSFENPNAPRSLIQGEQPKLDINVNVGAQQVGDDQFEVILTLNAKAERPDMVMFNVELVYAGLFKISGVPSDHMHPFVMIECPRMLFPFARNILSEATRNGGFPPLMLDPIDFAQLYRQNMANQAADQQAGEQKPN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJ97</accession>
    <name>A0A0M7AJ97_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Putative ABC transporter ATP-binding protein YheS</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">yheS</name>
        <name evidence="7" type="ORF">LAX5112_03887</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74512.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673192.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03887"/>
    <dbReference type="EnsemblBacteria" id="CTQ74512">
        <property type="protein sequence ID" value="CTQ74512"/>
        <property type="gene ID" value="LAX5112_03887"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.380">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032524">
        <property type="entry name" value="ABC_tran_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032781">
        <property type="entry name" value="ABC_tran_Xtn"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037118">
        <property type="entry name" value="Val-tRNA_synth_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16326">
        <property type="entry name" value="ABC_tran_CTD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12848">
        <property type="entry name" value="ABC_tran_Xtn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="6">
        <location>
            <begin position="2"/>
            <end position="243"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="6">
        <location>
            <begin position="311"/>
            <end position="525"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="537"/>
            <end position="556"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="34"/>
            <end position="41"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="343"/>
            <end position="350"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ74512.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="628" mass="69616" checksum="97A93D499DBF95D7" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AK10</accession>
    <name>A0A0M7AK10_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">mcpB_2</name>
        <name evidence="8" type="ORF">LAX5112_03695</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the methyl-accepting chemotaxis (MCP) protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ73924.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673036.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ73924">
        <property type="protein sequence ID" value="CTQ73924"/>
        <property type="gene ID" value="LAX5112_03695"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004089">
        <property type="entry name" value="MCPsignal_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000727">
        <property type="entry name" value="T_SNARE_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00015">
        <property type="entry name" value="MCPsignal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00283">
        <property type="entry name" value="MA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50111">
        <property type="entry name" value="CHEMOTAXIS_TRANSDUC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50192">
        <property type="entry name" value="T_SNARE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 3" id="KW-0807">Transducer</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="326"/>
            <end position="349"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="7">
        <location>
            <begin position="351"/>
            <end position="404"/>
        </location>
    </feature>
    <feature type="domain" description="Methyl-accepting transducer" evidence="5">
        <location>
            <begin position="444"/>
            <end position="666"/>
        </location>
    </feature>
    <feature type="domain" description="T-SNARE coiled-coil homology" evidence="6">
        <location>
            <begin position="596"/>
            <end position="658"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023224"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00029447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ73924.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="701" mass="74808" checksum="F26A4D40CEDC684F" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AK15</accession>
    <name>A0A0M7AK15_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">50S ribosomal protein L25</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">General stress protein CTC</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6 9" type="primary">rplY</name>
        <name evidence="6" type="synonym">ctc</name>
        <name evidence="9" type="ORF">LAX5112_04154</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Part of the 50S ribosomal subunit; part of the 5S rRNA/L5/L18/L25 subcomplex. Contacts the 5S rRNA. Binds to the 5S rRNA independently of L5 and L18.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75229.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673406.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04154"/>
    <dbReference type="EnsemblBacteria" id="CTQ75229">
        <property type="protein sequence ID" value="CTQ75229"/>
        <property type="gene ID" value="LAX5112_04154"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008097">
        <property type="term" value="F:5S rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00495">
        <property type="entry name" value="Ribosomal_L25_TL5_CTC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.170.120.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.240.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01334">
        <property type="entry name" value="Ribosomal_L25_CTC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020056">
        <property type="entry name" value="Rbsml_L25/Gln-tRNA_synth_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029751">
        <property type="entry name" value="Ribosomal_L25"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011035">
        <property type="entry name" value="Ribosomal_L25/Gln-tRNA_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020057">
        <property type="entry name" value="Ribosomal_L25_b-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037121">
        <property type="entry name" value="Ribosomal_L25_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001021">
        <property type="entry name" value="Ribosomal_L25_long"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01386">
        <property type="entry name" value="Ribosomal_L25p"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14693">
        <property type="entry name" value="Ribosomal_TL5_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50715">
        <property type="entry name" value="SSF50715"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00731">
        <property type="entry name" value="bL25_bact_ctc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 6" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="4 6" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="3 6" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="2 6" id="KW-0699">rRNA-binding</keyword>
    <feature type="domain" description="Ribosomal_TL5_C" evidence="8">
        <location>
            <begin position="103"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="185"/>
            <end position="207"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01334"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF14693"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ75229.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="207" mass="22052" checksum="6885CD66CC6B4F83" modified="2015-12-09" version="1">MASSYELKASARDRVGKGAARSLRREGLLPAVIYGDKKPALPITIPVKETTLTLHKGGFLTHIGTIDVDGEKHQVIAKDFQLHPVRDDVLHVDFLRVSGNTTLTVDIPVTFINEETCPGLKKGGMLNVVRHTVELIVPANAIPETLVFDLAKVDIGDTLHISATTLPAGAQPTITDRDFTVATLAAPGGGVQDDDAEAEGGEEETSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AK65</accession>
    <name>A0A0M7AK65_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Colanic acid/biofilm transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">LAX5112_04272</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75518.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673499.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000021.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04272"/>
    <dbReference type="EnsemblBacteria" id="CTQ75518">
        <property type="protein sequence ID" value="CTQ75518"/>
        <property type="gene ID" value="LAX5112_04272"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.530">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011711">
        <property type="entry name" value="GntR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008920">
        <property type="entry name" value="TF_FadR/GntR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000524">
        <property type="entry name" value="Tscrpt_reg_HTH_GntR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07729">
        <property type="entry name" value="FCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00392">
        <property type="entry name" value="GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00895">
        <property type="entry name" value="FCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00345">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48008">
        <property type="entry name" value="SSF48008"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50949">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH gntR-type" evidence="4">
        <location>
            <begin position="9"/>
            <end position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ75518.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="230" mass="26062" checksum="CEADC9038121BBE1" modified="2015-12-09" version="1">MSISEEKPTLTLEQVVQELELRIVLGRLRPKERLVEEELILELGVKRHIVRSAFLELERRHLVERRPNKGARVRDYSVDEVNALSAFRADLHRLAVSKIKFPISTKSLAELRRIARAYEMAVHDGDYAQAIASDNAFHTCLFELCENRFLTASIGEMSAAARPIDCFRIADPATLSRAVADHRQIIEAATRGNAGELAELCVNHVFASSDTYIREVLLHRHQSRKEGLGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AM67</accession>
    <name>A0A0M7AM67_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04184</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75320.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673425.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04184"/>
    <dbReference type="EnsemblBacteria" id="CTQ75320">
        <property type="protein sequence ID" value="CTQ75320"/>
        <property type="gene ID" value="LAX5112_04184"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.270.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010707">
        <property type="entry name" value="DUF1285"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023361">
        <property type="entry name" value="DUF1285_beta_roll_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06938">
        <property type="entry name" value="DUF1285"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF029557">
        <property type="entry name" value="UCP029557"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ75320.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="197" mass="21814" checksum="7E4ADF42B4EFB422" modified="2015-12-09" version="1">MTSQAKPEATLPDGLKALMSRAGSKDKAPPPVDKWNPPFCGDLDIRIARDGTWFYLGSPIGRKPLVELFASVLRKDEDGKHYLVTPVEKIGITVDDAPLLAVEMAVENEGADRQLTVRTNLGDLVRIGNDRPLRFEKEPDSGGIKPYVVVRGRIEALFTRALMYQLVEHMVERQGEKGLETGIWSGGQFFAVDPELL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AM71</accession>
    <name>A0A0M7AM71_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative glycosyltransferase EpsJ</fullName>
            <ecNumber evidence="2">2.4.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">epsJ</name>
        <name evidence="2" type="ORF">LAX5112_04276</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.4.-.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75526.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04276"/>
    <dbReference type="EnsemblBacteria" id="CTQ75526">
        <property type="protein sequence ID" value="CTQ75526"/>
        <property type="gene ID" value="LAX5112_04276"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016757">
        <property type="term" value="F:glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001173">
        <property type="entry name" value="Glyco_trans_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00535">
        <property type="entry name" value="Glycos_transf_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glyco_trans_2-like" evidence="1">
        <location>
            <begin position="396"/>
            <end position="511"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00535"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75526.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="1025" mass="116077" checksum="A33B6C4ECF427781" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMF8</accession>
    <name>A0A0M7AMF8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04337</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000022">
        <property type="protein sequence ID" value="CTQ75711.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75711">
        <property type="protein sequence ID" value="CTQ75711"/>
        <property type="gene ID" value="LAX5112_04337"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="29"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75711.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="33" mass="3611" checksum="2AEAC9310DC95B4F" modified="2015-12-09" version="1">MLGLTGPEIGHLLLSLVFVLIAFVAWRSVSKDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMM6</accession>
    <name>A0A0M7AMM6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Energy-dependent translational throttle protein EttA</fullName>
            <ecNumber evidence="7">3.6.1.-</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Translational regulatory factor EttA</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ettA</name>
        <name evidence="10" type="ORF">LAX5112_04353</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">A translation factor that gates the progression of the 70S ribosomal initiation complex (IC, containing tRNA(fMet) in the P-site) into the translation elongation cycle by using a mechanism sensitive to the ATP/ADP ratio. Binds to the 70S ribosome E-site where it modulates the state of the translating ribosome during subunit translocation. ATP hydrolysis probably frees it from the ribosome, which can enter the elongation phase.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>ATP + H2O = ADP + H(+) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="7">Monomer. Probably contacts ribosomal proteins L1, L5, L33 and S7, the 16S and 23S rRNA and the P-site containing tRNA(fMet).</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
        <text evidence="7">Associates with ribosomes and polysomes.</text>
    </comment>
    <comment type="domain">
        <text evidence="7">The P-site tRNA interaction motif (PtIM domain) probably interacts with the P-site tRNA(fMet) as well as the 23S rRNA.</text>
    </comment>
    <comment type="domain">
        <text evidence="7">The arm domain is inserted in the first ABC transporter domain. Probably contacts ribosomal protein L1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 7">Belongs to the ABC transporter superfamily. ABCF family. Translational throttle EttA subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="3.6.1.-" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75771.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673575.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000023.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04353"/>
    <dbReference type="EnsemblBacteria" id="CTQ75771">
        <property type="protein sequence ID" value="CTQ75771"/>
        <property type="gene ID" value="LAX5112_04353"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043022">
        <property type="term" value="F:ribosome binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045900">
        <property type="term" value="P:negative regulation of translational elongation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00847">
        <property type="entry name" value="EttA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032781">
        <property type="entry name" value="ABC_tran_Xtn"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022374">
        <property type="entry name" value="EttA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43858">
        <property type="entry name" value="PTHR43858"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12848">
        <property type="entry name" value="ABC_tran_Xtn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03719">
        <property type="entry name" value="ABC_ABC_ChvD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 7 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4 7 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0677">Repeat</keyword>
    <keyword evidence="7" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="3 7" id="KW-0699">rRNA-binding</keyword>
    <keyword evidence="6 7" id="KW-0810">Translation regulation</keyword>
    <keyword evidence="2 7" id="KW-0820">tRNA-binding</keyword>
    <feature type="domain" description="ABC transporter" evidence="9">
        <location>
            <begin position="7"/>
            <end position="254"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="9">
        <location>
            <begin position="319"/>
            <end position="536"/>
        </location>
    </feature>
    <feature type="region of interest" description="PtIM" evidence="7">
        <location>
            <begin position="237"/>
            <end position="317"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7 8">
        <location>
            <begin position="40"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7 8">
        <location>
            <begin position="351"/>
            <end position="358"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005868"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022845"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00847"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ75771.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="550" mass="61535" checksum="47DC30F328045A79" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANI6</accession>
    <name>A0A0M7ANI6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Acyl-CoA dehydrogenase</fullName>
            <ecNumber evidence="9">1.3.99.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">acdA_3</name>
        <name evidence="9" type="ORF">LAX5112_04463</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 5">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the acyl-CoA dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.3.99.-" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ76091.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673666.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000024.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04463"/>
    <dbReference type="EnsemblBacteria" id="CTQ76091">
        <property type="protein sequence ID" value="CTQ76091"/>
        <property type="gene ID" value="LAX5112_04463"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016627">
        <property type="term" value="F:oxidoreductase activity, acting on the CH-CH group of donors"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.540.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006091">
        <property type="entry name" value="Acyl-CoA_Oxase/DH_mid-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046373">
        <property type="entry name" value="Acyl-CoA_Oxase/DH_mid-dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036250">
        <property type="entry name" value="AcylCo_DH-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009075">
        <property type="entry name" value="AcylCo_DH/oxidase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013786">
        <property type="entry name" value="AcylCoA_DH/ox_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037069">
        <property type="entry name" value="AcylCoA_DH/ox_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009100">
        <property type="entry name" value="AcylCoA_DH/oxidase_NM_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00441">
        <property type="entry name" value="Acyl-CoA_dh_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02770">
        <property type="entry name" value="Acyl-CoA_dh_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02771">
        <property type="entry name" value="Acyl-CoA_dh_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47203">
        <property type="entry name" value="SSF47203"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56645">
        <property type="entry name" value="SSF56645"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0274">FAD</keyword>
    <keyword evidence="3 5" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="5 9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Acyl-CoA_dh_N" evidence="8">
        <location>
            <begin position="6"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="domain" description="Acyl-CoA_dh_M" evidence="7">
        <location>
            <begin position="125"/>
            <end position="220"/>
        </location>
    </feature>
    <feature type="domain" description="Acyl-CoA_dh_1" evidence="6">
        <location>
            <begin position="232"/>
            <end position="396"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009347"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU362125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00441"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF02770"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF02771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ76091.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="397" mass="43861" checksum="032464776BE09B66" modified="2015-12-09" version="1">MDINYTPEDEVFRTEVKAFLEAELPKDLSDKVKAGQKLDGEDFMRWQQILGQKGWLAPRWPEEHGGCGWTPMQVNIFDEEAYLAGAPRVLPFGVNMVGPVIIEFGSEDQKARHLPGIARGEVPWCQGFSEPGSGSDLASLKTAAVRDGDDYIVNGQKIWTSYAHFSDWMFCLVRTDPNAAKKQQGISFLLIDMKTPGITVRPIITFDGMHSVNEVFLENVRVPAENLVGEENKGWDYAKFLLGHERTGIAGVGGCKAEFEKLLEIARTEKKNGKPLIEDPLFAAKIARLEIDLRALELTNMRMLSGSGTGLNGAFPSVLKIKGTEVQQRIAELQMDAVGVHALPWQQAAMDPAWNGGTVGPDYAIPRMPAYIDRRKATIYGGSTEIQKNIISKALLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANR9</accession>
    <name>A0A0M7ANR9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">TDP-fucosamine acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04166</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75264.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008193891.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04166"/>
    <dbReference type="EnsemblBacteria" id="CTQ75264">
        <property type="protein sequence ID" value="CTQ75264"/>
        <property type="gene ID" value="LAX5112_04166"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="3"/>
            <end position="139"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75264.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="159" mass="18079" checksum="BCA4DBDEE10931D2" modified="2015-12-09" version="1">MSVTIHATTAEDHADVLQLLNDRWTSPDMIIENETIDASRLPGYTARADGELVGLVTLIKRPEEWEILTLDSFNRWDGVGSRLLQAVVEEAKASHIHRLTVRTSNDNLDAFRFYQRRGFRLERIGFGVIDAEREKNPGIPLTGDYGIEIHDEVFFARSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AP83</accession>
    <name>A0A0M7AP83_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative methyltransferase YcgJ</fullName>
            <ecNumber evidence="2">2.1.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ycgJ</name>
        <name evidence="2" type="ORF">LAX5112_04533</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.1.1.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000025">
        <property type="protein sequence ID" value="CTQ76242.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673724.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000025.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04533"/>
    <dbReference type="EnsemblBacteria" id="CTQ76242">
        <property type="protein sequence ID" value="CTQ76242"/>
        <property type="gene ID" value="LAX5112_04533"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001845">
        <property type="entry name" value="HTH_ArsR_DNA-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013216">
        <property type="entry name" value="Methyltransf_11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01022">
        <property type="entry name" value="HTH_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08241">
        <property type="entry name" value="Methyltransf_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00778">
        <property type="entry name" value="HTHARSR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00418">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50987">
        <property type="entry name" value="HTH_ARSR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="HTH arsR-type" evidence="1">
        <location>
            <begin position="4"/>
            <end position="98"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50987"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76242.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="336" mass="37097" checksum="6D9A35A98047ED64" modified="2015-12-09" version="1">MTERNTLSVDETLAALRAVGEATRIRLIALLAQNELTVKDATAILGQSQPRISRHLKLLAEADVIQRFPEGSWVYYRLSDGPEGALARDVVARISNEDAVLAADQERFQTIRKAKAEEAAAFFAGRALTWDRERSLHVLEADVEAAMRNALGDAPFQTFLDLGTGTGRLLEVFADQYVSALGVDASHDMLSVARANLSKAGLNNAQVRHGDVYALNVPPKSFDVVAIHQVLHFLDDPARALAEAARALRPGGRLLIVDFAPHELEFLRDRHAHRRLGFASEQMERWLDALDLDLEQTTDLVPGEADDSKLTVTLWLARDRRIITDVPAQNSSREVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APF6</accession>
    <name>A0A0M7APF6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_04778</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the bacterial solute-binding protein 1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000030">
        <property type="protein sequence ID" value="CTQ77018.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008193479.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000030.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04778"/>
    <dbReference type="EnsemblBacteria" id="CTQ77018">
        <property type="protein sequence ID" value="CTQ77018"/>
        <property type="gene ID" value="LAX5112_04778"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006059">
        <property type="entry name" value="SBP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13416">
        <property type="entry name" value="SBP_bac_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0574">Periplasm</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="6">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809640" evidence="6">
        <location>
            <begin position="23"/>
            <end position="366"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008520"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ77018.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="366" mass="40350" checksum="4C41D7459585BB6B" modified="2015-12-09" version="1">MKLKTLILAGTAMAFAGSAALAQDMTIVSWGGAYSASQNNAYHKPYMEKNPGVNIINDESSAEAVAKLRAMNEAGNITWDLVDVVASDAIRLCDEGLAMEIDADSDLAAAPDGTPASEDFGDLLVSECFIPQIVYSTTFGYRSDVEEWGGKEPTDICAVFDTETFPGKRSLEKRPINNVEWALLCDGVAKEDVYDVLETEEGLDRALAKLGTIKDDVIWWSAGAETPQLLADKEVVIGSTYNGRLFALIEEQKQPVKMLWDAQVFDLDGWIIPTGLSDERLARVKDYIMFATDTQRLADQAKYISYGPARKSSAPLVGQHASLGIDMAPHMPTDPENAKNTFLYNYEWWADYRDDIDAKFQAWLAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APW7</accession>
    <name>A0A0M7APW7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Maltose/maltodextrin import ATP-binding protein MalK</fullName>
            <ecNumber evidence="8">3.6.3.19</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">malK_6</name>
        <name evidence="8" type="ORF">LAX5112_04597</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.19" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000027">
        <property type="protein sequence ID" value="CTQ76456.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673788.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000027.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04597"/>
    <dbReference type="EnsemblBacteria" id="CTQ76456">
        <property type="protein sequence ID" value="CTQ76456"/>
        <property type="gene ID" value="LAX5112_04597"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008995">
        <property type="entry name" value="Mo/tungstate-bd_C_term_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013611">
        <property type="entry name" value="Transp-assoc_OB_typ2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08402">
        <property type="entry name" value="TOBE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50331">
        <property type="entry name" value="SSF50331"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ABC transporter" evidence="7">
        <location>
            <begin position="4"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="36"/>
            <end position="43"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ76456.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="331" mass="36262" checksum="F22E237FF744E6A8" modified="2015-12-09" version="1">MSEVHLRNLSKAFGKTVAVEDVTLTVPDGAFVTLLGPTGAGKTTILRLISGLEQPDAGDVVIGGRSAVDDTPAQRNVAMVFQQYSLYPHLSVKDNLAFPLRSPLLKTPEHEIERKVTEVAEVLRIPHKLNNKATELSGGEMQRVSIGRALVRNPSIYLMDEPLSSLDAKLRSDLRIELKRIQETLGATLLYVTHDQVEAMTMSTHIGVLDNGRLVQFGAPREIYENPVNLYVAGRLGQPRINILPADMFAGSPAGARQIGLRPEHIEQGEGKESTVKRVEHLGDQIRLHLTLEGHDLVTLTDPHADLEPGDIIAIQPRNPLFFDASGARIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQH0</accession>
    <name>A0A0M7AQH0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Trehalose-binding lipoprotein LpqY</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">lpqY</name>
        <name evidence="7" type="ORF">LAX5112_04613</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the bacterial solute-binding protein 1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000027">
        <property type="protein sequence ID" value="CTQ76500.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673800.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000027.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04613"/>
    <dbReference type="EnsemblBacteria" id="CTQ76500">
        <property type="protein sequence ID" value="CTQ76500"/>
        <property type="gene ID" value="LAX5112_04613"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006059">
        <property type="entry name" value="SBP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01547">
        <property type="entry name" value="SBP_bac_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="5" id="KW-0574">Periplasm</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="6">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809531" evidence="6">
        <location>
            <begin position="25"/>
            <end position="442"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008520"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ76500.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="442" mass="48037" checksum="A44F93EAFE9B9651" modified="2015-12-09" version="1">MLKVLRQASLGVVSALALTTAALANPYEEYAGETLIVNFPAHPHFDAVMKILPEFTKETGIEVEVDQLPYLKMRERQTLELAQDEGEYDLIAYVVFSKADYVYADQLENLARYFMNPKLADPAYDADDLIDGYVYNIGFAGGNKGYLEGKTGSLFGIPYGSETSVLGYRKDIFDKHGLKVPETYEELLEIACKIPELEPGMGGLSSRAASGHHASHAFLLHLAPLGGRIFDDQWNPIVNNEAGVQAANALKSIVDCGPEGAASFGFGEALGSFLNGDTAMFLDTTVVAGQINDPAKSQVVGKVGWAMHPMGVRRGSQTGGFGIGIPKNAENKEAAFLLMQWLTSKHGDKLVAMQGGNPSRFSTHADPDVNEKFPHMATFGEALKHADPDWRPIIPVWGKINADLGTTLSKVLTEDLDVQEALDGVAERTKAVMDEAGYYTWQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQU2</accession>
    <name>A0A0M7AQU2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04706</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000028">
        <property type="protein sequence ID" value="CTQ76776.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76776">
        <property type="protein sequence ID" value="CTQ76776"/>
        <property type="gene ID" value="LAX5112_04706"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ76776.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="108" mass="12219" checksum="FB7F6739A3501C4A" modified="2015-12-09" version="1">MPSDTKTLFAFKDRPCWRIETGVPWQRSVVEIDRTGARPLPYCVGKHSQIGNAEQPVELELCRGFLKRVAPLGRLNTMRCRPIPNCRVGGYDRNDAVTAIFQVFATLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQU8</accession>
    <name>A0A0M7AQU8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04422</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75954.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75954">
        <property type="protein sequence ID" value="CTQ75954"/>
        <property type="gene ID" value="LAX5112_04422"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.150.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043708">
        <property type="entry name" value="DUF5648"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001343">
        <property type="entry name" value="Hemolysn_Ca-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011049">
        <property type="entry name" value="Serralysin-like_metalloprot_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18885">
        <property type="entry name" value="DUF5648"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00353">
        <property type="entry name" value="HemolysinCabind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51120">
        <property type="entry name" value="SSF51120"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ75954.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="401" mass="43691" checksum="0F1F910ECECE2B97" modified="2015-12-09" version="1">MAVTVTINNAKNIGLDFVIGTLDSILTDNPPAFFSSELITYSAETTSYDGIAIDVVTRGTNFTRELIDGTFFQTGGRINSVVVSSNNEELFTILPALEFSDIASIYIADETGVHPTGLEEYFMALPWVVTLSNQNDSAVEGMLVGDNANFNLTNNDLVLALAGDDRFFGGDGHDTFNGGSGDDWFDGGTGVDRAAFIGTRSDYAVFRANDGDIYVADSIGQRDDTDVLTNTEHLVFDERTVSLDEALIEPTDPDNSAYQIYRFYNTESGSHFFTTSIAERNSIIENLNGLSYEGNAFDSNVTDVNGTAVFRFYNTTNGVHFYTADAGEAASIRQNMSNLQDEGIAYYASADDSNGGTALFRFFNTQNGSHFFTLSEAERDNIVATLGHYSYEGIAFYVDLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARD2</accession>
    <name>A0A0M7ARD2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Gcv operon activator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">gcvA_15</name>
        <name evidence="3" type="ORF">LAX5112_04764</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000030">
        <property type="protein sequence ID" value="CTQ76976.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008191628.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000030.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04764"/>
    <dbReference type="EnsemblBacteria" id="CTQ76976">
        <property type="protein sequence ID" value="CTQ76976"/>
        <property type="gene ID" value="LAX5112_04764"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00039">
        <property type="entry name" value="HTHLYSR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="12"/>
            <end position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ76976.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="307" mass="34964" checksum="A9606BCD58F652C2" modified="2015-12-09" version="1">MKRAFVPPADTLIAFECAARHLSFTRAAEELHLTQGAVSKQVRQLEDRLGVELFRRVRQRIVLTDAGRLYLHDIRGALEQMTLATRQVMSFAGSADVLNLAVLPTFGTRWLAPRISDFIRRYPDAGLNLSVRLQPFDFDEEPFDGAIHHGDPVWAGAIAEHLFDEEVIPVASRVFRDRHNIRVPEDLTRVPRLQLATRPLAWRHWFESAGVETDAAFQGARFEQFVMITEAAIHHAGAALIPRFFIEQELASGRLVRLFDVPPEHETAYFFVYPEGRTMRPVVAAFRKWLAEEARSARTDRETMLPG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARI6</accession>
    <name>A0A0M7ARI6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">External scaffolding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_05036</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000045">
        <property type="protein sequence ID" value="CTQ77738.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_000084700.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000045.1"/>
    </dbReference>
    <dbReference type="SMR" id="A0A0M7ARI6"/>
    <dbReference type="EnsemblBacteria" id="CTQ77738">
        <property type="protein sequence ID" value="CTQ77738"/>
        <property type="gene ID" value="LAX5112_05036"/>
    </dbReference>
    <dbReference type="GeneID" id="39482434"/>
    <dbReference type="GeneID" id="55495896"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046797">
        <property type="term" value="P:viral procapsid maturation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1850.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004196">
        <property type="entry name" value="Scaffold_D"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036632">
        <property type="entry name" value="Scaffold_D_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02925">
        <property type="entry name" value="gpD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48045">
        <property type="entry name" value="SSF48045"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ77738.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="152" mass="16937" checksum="E8C912DCBA48D5E4" modified="2015-12-09" version="1">MSQVTEQSVRFQTALASIKLIQASAVLDLTEDDFDFLTSNKVWIATDRSRARRCVEACVYGTLDFVGYPRFPAPVEFIAAVIAYYVHPVNIQTACLIMEGAEFTENIINGVERPVKAAELFAFTLRVRAGNTDVLTDAEENVRQKLRAEGVM</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARL4</accession>
    <name>A0A0M7ARL4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Arylsulfatase</fullName>
            <ecNumber evidence="4">3.1.6.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">atsA_5</name>
        <name evidence="4" type="ORF">LAX5112_04944</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="PTM">
        <text evidence="1">The conversion to 3-oxoalanine (also known as C-formylglycine, FGly), of a serine or cysteine residue in prokaryotes and of a cysteine residue in eukaryotes, is critical for catalytic activity.</text>
    </comment>
    <dbReference type="EC" id="3.1.6.1" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000036">
        <property type="protein sequence ID" value="CTQ77539.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674085.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000036.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04944"/>
    <dbReference type="EnsemblBacteria" id="CTQ77539">
        <property type="protein sequence ID" value="CTQ77539"/>
        <property type="gene ID" value="LAX5112_04944"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004065">
        <property type="term" value="F:arylsulfatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017850">
        <property type="entry name" value="Alkaline_phosphatase_core_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000917">
        <property type="entry name" value="Sulfatase_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00884">
        <property type="entry name" value="Sulfatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53649">
        <property type="entry name" value="SSF53649"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809890" evidence="2">
        <location>
            <begin position="31"/>
            <end position="584"/>
        </location>
    </feature>
    <feature type="domain" description="Sulfatase" evidence="3">
        <location>
            <begin position="75"/>
            <end position="418"/>
        </location>
    </feature>
    <feature type="modified residue" description="3-oxoalanine (Cys)" evidence="1">
        <location>
            <position position="125"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRSR" id="PIRSR600917-51"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ77539.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="584" mass="64633" checksum="C6B7EA7EE6938C83" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARP1</accession>
    <name>A0A0M7ARP1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04956</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000037">
        <property type="protein sequence ID" value="CTQ77569.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674096.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000037.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77569">
        <property type="protein sequence ID" value="CTQ77569"/>
        <property type="gene ID" value="LAX5112_04956"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="91"/>
            <end position="119"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77569.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="119" mass="13640" checksum="5B8DAD6E99907F45" modified="2015-12-09" version="1">MDDMDRAQKLRQMSIGQLVKRISASTLDRDFMGLPETGEIWVRTPENLKDYLAHVLHELREPWRLRCMPSGGRKDDTAYFNIWMKKRDRDFPELRPGYTPPEGGDDDGGDDGAPPPPVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASA7</accession>
    <name>A0A0M7ASA7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04943</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000036">
        <property type="protein sequence ID" value="CTQ77537.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674084.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000036.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04943"/>
    <dbReference type="EnsemblBacteria" id="CTQ77537">
        <property type="protein sequence ID" value="CTQ77537"/>
        <property type="gene ID" value="LAX5112_04943"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809623" evidence="1">
        <location>
            <begin position="26"/>
            <end position="266"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77537.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="266" mass="28367" checksum="7E143F01997F36B5" modified="2015-12-09" version="1">MPQKHGFSSLAVFGLACGISLPAQADTNEDLAKQLANPIASLISVPVEVAHDRGLGTNGDGHSTALVVKPVIPFRINDSWNIISRTIIPYITTSDVTPGEYKHGFGDVQQSFFLSPNAVGPGGVTWGIGPVLQIPLSANNGLGTNEWGAGVTGVALAQPGPWTIGILANHVWNIDAAAPEQSKTFLQPFLNYTTENSWTFTVNTESTYDWVNDQWTVPMNYKIAKLVSAGGQRISLSAKATHWVESPSAGPRDWGATLGATFLFPK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASD8</accession>
    <name>A0A0M7ASD8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Exoenzyme S synthesis regulatory protein ExsA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">exsA</name>
        <name evidence="3" type="ORF">LAX5112_04684</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000028">
        <property type="protein sequence ID" value="CTQ76713.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673866.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000028.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04684"/>
    <dbReference type="EnsemblBacteria" id="CTQ76713">
        <property type="protein sequence ID" value="CTQ76713"/>
        <property type="gene ID" value="LAX5112_04684"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018062">
        <property type="entry name" value="HTH_AraC-typ_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00041">
        <property type="entry name" value="HTH_ARAC_FAMILY_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="2">
        <location>
            <begin position="214"/>
            <end position="315"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ76713.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="318" mass="34849" checksum="FC34063158C46F2B" modified="2015-12-09" version="1">MDADQIERAVLHTTDFEELQDAAVDWDQQYLQMAPGNFQGALDLTKIGSRQIFRETWGKKLRYQGTAPKGAFGFALRLDKGGPANWVGRPAGADSVILQAPGREADLVSSDFWDCLVLGISEEEVTETVGALTGGEDLSSEFHGVLELKPDVTEKLKRLGLDFLSLSKSNCIADEPAIAKSSKQLVGLFLWEIVRAFESPDLVVETSKSSLIVKQATDLISSEQADGTGLVEICSNLGVSLRSLHYAFQDVTGMSPAAWLRRVRLNRVHKTLLQSSTEEVMVKQVAMENGFVHAGHFCNQYSKLFGCLPSETLQRANA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASJ0</accession>
    <name>A0A0M7ASJ0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04625</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000027">
        <property type="protein sequence ID" value="CTQ76534.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76534">
        <property type="protein sequence ID" value="CTQ76534"/>
        <property type="gene ID" value="LAX5112_04625"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ76534.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="136" mass="13987" checksum="E15C830EEEF96F64" modified="2015-12-09" version="1">MKPLFLSAAFALSVVGSDVAKAEALIFPAPVVVYPVAPPPAPKVIVVPPMPVIVAPMRRPRLVLRRPAPLYGAAVASKNHHCSSGTCTAEVTRTGPKGNSMVRSGSASCADGVCSRTQTVTGPNGKSGSVNRTISR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ATQ1</accession>
    <name>A0A0M7ATQ1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Soluble hydrogenase 42 kDa subunit</fullName>
            <ecNumber evidence="8">1.12.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">LAX5112_04760</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 4 6">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.</text>
    </comment>
    <dbReference type="EC" id="1.12.-.-" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000030">
        <property type="protein sequence ID" value="CTQ76964.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673925.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000030.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04760"/>
    <dbReference type="EnsemblBacteria" id="CTQ76964">
        <property type="protein sequence ID" value="CTQ76964"/>
        <property type="gene ID" value="LAX5112_04760"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000192">
        <property type="entry name" value="Aminotrans_V_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020578">
        <property type="entry name" value="Aminotrans_V_PyrdxlP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024169">
        <property type="entry name" value="SP_NH2Trfase/AEP_transaminase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00266">
        <property type="entry name" value="Aminotran_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000524">
        <property type="entry name" value="SPT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00595">
        <property type="entry name" value="AA_TRANSFER_CLASS_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3 4" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aminotran_5" evidence="7">
        <location>
            <begin position="50"/>
            <end position="328"/>
        </location>
    </feature>
    <feature type="modified residue" description="N6-(pyridoxal phosphate)lysine" evidence="4">
        <location>
            <position position="198"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009236"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR000524-50"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU004075"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU004504"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00266"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ76964.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="392" mass="42513" checksum="E97E184B856EF0FF" modified="2015-12-09" version="1">MPLRYGKEFLMIPGPTNVPEEVLRAMHRPAIDIYEGPLLETTDACLSGLKQLFRTEGKTYIYAANGHGAWDAALTNTLNRGDKILALHSGLFAAGWGEASKLLDLNVEVLPGTWRAAVDPDKLEARLMEDTGHEIKAILVVQVDTASGVWNDIQALRKAIDAAQHPALFMVDTIASLGCIPFEMDEWGIDVALTGSQKGLMSPPGLSFVAAGPKADKAHETANLRTNYFDWTFRQGSVHYQKYCGTPPEHLLFGFRKALDLVFDEGLEQVWNRHTLLADATRAAVTQWAKGGVLEFNIEDPRNRSDSVTVVRLKGTDPEPLRDFTKQVCGVTIGGTIGELSNEGIRIAHMGHVNAVMTLGTLSAIELGLAKLGILHEQGGVQAAIDTLAGAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZMG3</accession>
    <name>A0A0M6ZMG3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Bacterial extracellular solute-binding proteins, family 3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_00124</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63949.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ63949">
        <property type="protein sequence ID" value="CTQ63949"/>
        <property type="gene ID" value="LAX5112_00124"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005808846" evidence="2">
        <location>
            <begin position="32"/>
            <end position="255"/>
        </location>
    </feature>
    <feature type="domain" description="PBPb" evidence="3">
        <location>
            <begin position="34"/>
            <end position="239"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00497"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ63949.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="255" mass="27875" checksum="AFFCCDB74B0A11D0" modified="2015-12-09" version="1">MKYADLKSFVNLLPIHAVLVGGVSLSSAALADTVIVGVEDLTYYPHYTMDGGEYGGFGRALLDAWASDNGHTLKYEAYPIKRLMENLVEGTVDIKYPDNAYWSADLKDGKPVVYSDKVVEYIDGVSVTPGNVGKGMDSIKKLGTVRGFTPWSWIDLTSSGAVELSEVKSLDGLIKQAINSRIDAAYANVAVIQHQLGEMGQPDALAFDPDLKHTRDYYYASTTTKPELIADFNSWMSENADKVAALKAEYKVTLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZNE3</accession>
    <name>A0A0M6ZNE3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">glnL_1</name>
        <name evidence="6" type="ORF">LAX5112_00241</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64278.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00241"/>
    <dbReference type="EnsemblBacteria" id="CTQ64278">
        <property type="protein sequence ID" value="CTQ64278"/>
        <property type="gene ID" value="LAX5112_00241"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Histidine kinase" evidence="5">
        <location>
            <begin position="160"/>
            <end position="379"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ64278.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="390" mass="42256" checksum="5602F5B143B1DB18" modified="2015-12-09" version="1">MVFFLQNTDGSVTDRDTPKGRTEALASDGPTILDALPHPVLLVAPDGVIESANMAAEFFMRSSISVLRRHPINEFIPFGSPLLTLIDQVRERGAAVNEYKVDIGSPRIGAPKIVDINAAPVANRPGAVVLMFQERTMAEKIDRQLTSRGAARTVTGLAAMLAHEIKNPLSGIRGAAQLLEQSAPDEDRALTRLITDETDRIVKLVDRMEVFSDERPIERDPVNIHVVLDHVKRLSDSGFARDNRITENYDPSLPPVYANKDQLIQVFLNLIKNASEAIGDDPDGEIRVSTAFRPGVRLSVPGTEDKVSLPLEFCVQDNGPGVPEDLLPHLFEPFITTKTNGSGLGLALVAKIIGDHGGVIECDSQRGKTVFRILMPAYSTTDSGSGTGAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZNF7</accession>
    <name>A0A0M6ZNF7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Aminomethyltransferase</fullName>
            <ecNumber evidence="6">2.1.2.10</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">gcvT_2</name>
        <name evidence="6" type="ORF">LAX5112_00057</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the GcvT family.</text>
    </comment>
    <dbReference type="EC" id="2.1.2.10" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63761.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670115.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00057"/>
    <dbReference type="EnsemblBacteria" id="CTQ63761">
        <property type="protein sequence ID" value="CTQ63761"/>
        <property type="gene ID" value="LAX5112_00057"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004047">
        <property type="term" value="F:aminomethyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008115">
        <property type="term" value="F:sarcosine oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046653">
        <property type="term" value="P:tetrahydrofolate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.1100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.440">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1360.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042204">
        <property type="entry name" value="2Fe-2S-bd_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041854">
        <property type="entry name" value="BFD-like_2Fe2S-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028896">
        <property type="entry name" value="GCST/YgfZ/DmdA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013977">
        <property type="entry name" value="GCV_T_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006222">
        <property type="entry name" value="GCV_T_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029043">
        <property type="entry name" value="GcvT/YgfZ_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006277">
        <property type="entry name" value="Sarcosine_oxidase_asu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041117">
        <property type="entry name" value="SoxA_A3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027266">
        <property type="entry name" value="TrmE/GcvT_dom1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43757">
        <property type="entry name" value="PTHR43757"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01571">
        <property type="entry name" value="GCV_T"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08669">
        <property type="entry name" value="GCV_T_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17806">
        <property type="entry name" value="SO_alpha_A3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF037980">
        <property type="entry name" value="SoxA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101790">
        <property type="entry name" value="SSF101790"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01372">
        <property type="entry name" value="soxA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="SO_alpha_A3" evidence="5">
        <location>
            <begin position="519"/>
            <end position="600"/>
        </location>
    </feature>
    <feature type="domain" description="GCV_T" evidence="3">
        <location>
            <begin position="617"/>
            <end position="882"/>
        </location>
    </feature>
    <feature type="domain" description="GCV_T_C" evidence="4">
        <location>
            <begin position="907"/>
            <end position="992"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008609"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01571"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF08669"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF17806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ63761.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="1000" mass="107708" checksum="3477C400EC71254B" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZP69</accession>
    <name>A0A0M6ZP69_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">FeS assembly SUF system protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00155</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64032.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670174.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00155"/>
    <dbReference type="EnsemblBacteria" id="CTQ64032">
        <property type="protein sequence ID" value="CTQ64032"/>
        <property type="gene ID" value="LAX5112_00155"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.130">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034904">
        <property type="entry name" value="FSCA_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002744">
        <property type="entry name" value="MIP18-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014291">
        <property type="entry name" value="SUF_FeS_clus_asmbl-assoc"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01883">
        <property type="entry name" value="FeS_assembly_P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF117916">
        <property type="entry name" value="SSF117916"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02945">
        <property type="entry name" value="SUF_assoc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FeS_assembly_P" evidence="1">
        <location>
            <begin position="36"/>
            <end position="107"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64032.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="131" mass="14075" checksum="A0DD438B00399577" modified="2015-12-09" version="1">MDNATTIDTNAAGEELQAEVSAQSAISPAELDRLTTDIIGALKTVYDPEIPCDIYELGLIYKVDIEDDRSINIDMTLTAPGCPVAGEMPGWVENAVASVAGVGPVTVDMVFDPPWTPDRMSDEAKVALNWY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPA5</accession>
    <name>A0A0M6ZPA5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Histidine--tRNA ligase</fullName>
            <ecNumber evidence="9">6.1.1.21</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">Histidyl-tRNA synthetase</fullName>
            <shortName evidence="9">HisRS</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="primary">hisS_1</name>
        <name evidence="9" type="synonym">hisS</name>
        <name evidence="11" type="ORF">LAX5112_00325</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 9">
            <text>ATP + L-histidine + tRNA(His) = AMP + diphosphate + H(+) + L-histidyl-tRNA(His)</text>
            <dbReference type="Rhea" id="RHEA:17313"/>
            <dbReference type="Rhea" id="RHEA-COMP:9665"/>
            <dbReference type="Rhea" id="RHEA-COMP:9689"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57595"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78527"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.21"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="3 9">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the class-II aminoacyl-tRNA synthetase family.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.21" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64578.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670530.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00325"/>
    <dbReference type="EnsemblBacteria" id="CTQ64578">
        <property type="protein sequence ID" value="CTQ64578"/>
        <property type="gene ID" value="LAX5112_00325"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004821">
        <property type="term" value="F:histidine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006427">
        <property type="term" value="P:histidyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00773">
        <property type="entry name" value="HisRS-like_core"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00859">
        <property type="entry name" value="HisRS_anticodon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.930.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.800">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00127">
        <property type="entry name" value="His_tRNA_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006195">
        <property type="entry name" value="aa-tRNA-synth_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045864">
        <property type="entry name" value="aa-tRNA-synth_II/BPL/LPL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004154">
        <property type="entry name" value="Anticodon-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036621">
        <property type="entry name" value="Anticodon-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015807">
        <property type="entry name" value="His-tRNA-ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041715">
        <property type="entry name" value="HisRS-like_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004516">
        <property type="entry name" value="HisRS/HisZ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033656">
        <property type="entry name" value="HisRS_anticodon"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03129">
        <property type="entry name" value="HGTP_anticodon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13393">
        <property type="entry name" value="tRNA-synt_His"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001549">
        <property type="entry name" value="His-tRNA_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55681">
        <property type="entry name" value="SSF55681"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00442">
        <property type="entry name" value="hisS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50862">
        <property type="entry name" value="AA_TRNA_LIGASE_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 9" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="6 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 9 11" id="KW-0436">Ligase</keyword>
    <keyword evidence="5 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7 9" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AA_TRNA_LIGASE_II" evidence="10">
        <location>
            <begin position="29"/>
            <end position="387"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001137"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008226"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50862"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ64578.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="514" mass="56965" checksum="BA962E27ADF6E5B8" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQK5</accession>
    <name>A0A0M6ZQK5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Glutamate--cysteine ligase</fullName>
            <ecNumber evidence="2">6.3.2.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">gshA</name>
        <name evidence="4" type="ORF">LAX5112_00343</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Catalyzes the synthesis of gamma-glutamylcysteine (gamma-GC).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 2">
            <text>ATP + L-cysteine + L-glutamate = ADP + gamma-L-glutamyl-L-cysteine + H(+) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:13285"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:35235"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58173"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.2.2"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the glutamate--cysteine ligase type 2 family. EgtA subfamily.</text>
    </comment>
    <dbReference type="EC" id="6.3.2.2" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64627.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670334.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00343"/>
    <dbReference type="EnsemblBacteria" id="CTQ64627">
        <property type="protein sequence ID" value="CTQ64627"/>
        <property type="gene ID" value="LAX5112_00343"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004357">
        <property type="term" value="F:glutamate-cysteine ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006750">
        <property type="term" value="P:glutathione biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035434">
        <property type="entry name" value="GCL_bact_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006336">
        <property type="entry name" value="GCS2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014746">
        <property type="entry name" value="Gln_synth/guanido_kin_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011556">
        <property type="entry name" value="Glut_cys_lig_pln_type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34378">
        <property type="entry name" value="PTHR34378"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34378:SF1">
        <property type="entry name" value="PTHR34378:SF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04107">
        <property type="entry name" value="GCS2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF017901">
        <property type="entry name" value="GCL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55931">
        <property type="entry name" value="SSF55931"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01436">
        <property type="entry name" value="glu_cys_lig_pln"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="2 4" id="KW-0436">Ligase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="disulfide bond" evidence="3">
        <location>
            <begin position="114"/>
            <end position="335"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00029283"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRNR" id="PIRNR017901"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR017901-50"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ64627.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="457" mass="50629" checksum="04D6C4E8F336861B" modified="2015-12-09" version="1">MARDTVDATPIETVADLAATLEVGCKPTSDFRIGTEHEKFGFNVKDNSPIPYGGANGVEAVLEGMERLLGWERIEDAGKIIGLADDQGGGAISIEPGGQFELSGAPLDNLHQTCREANQHLAHVRQVAEPLGVGFLGIGMAPTWARADMPRMPKSRYDIMTNYMPKVGSLGLDMMYRTSTIQVNLDFETEADMVKKMRVGLALQPIATAIFANSPFTDGKPNGFKSFRAQIWTDTDTDRTGDMPFAFDDGFGFERYVEWALDVPMYFVKRGSEYHDVTGTTFRAFMNGALEGKIPDARPSLGDWNNHLSTLFPDVRLKKYIEMRGADGGPWRRICALPALWVGLLYDTGVLDQAFELVKDWTAEERAALRARVPETALQTPFRTGTVLDVAKEVLALSQEGLKRRARMSDGDLDERVHLAPVEEGLAAGMCPADILLQRYNGSWNRDLSQIFREYAY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQZ1</accession>
    <name>A0A0M6ZQZ1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Phospholipase D</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="16">Choline phosphatase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="19" type="primary">ywiE_1</name>
        <name evidence="19" type="ORF">LAX5112_00116</name>
    </gene>
    <organism evidence="19 20">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="20" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="20">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Could be a virulence factor.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="3">Secreted</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63924.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670148.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00116"/>
    <dbReference type="EnsemblBacteria" id="CTQ63924">
        <property type="protein sequence ID" value="CTQ63924"/>
        <property type="gene ID" value="LAX5112_00116"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008808">
        <property type="term" value="F:cardiolipin synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032049">
        <property type="term" value="P:cardiolipin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022924">
        <property type="entry name" value="Cardiolipin_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027379">
        <property type="entry name" value="CLS_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025202">
        <property type="entry name" value="PLD-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001736">
        <property type="entry name" value="PLipase_D/transphosphatidylase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13091">
        <property type="entry name" value="PLDc_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13396">
        <property type="entry name" value="PLDc_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00155">
        <property type="entry name" value="PLDc"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR04265">
        <property type="entry name" value="bac_cardiolipin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50035">
        <property type="entry name" value="PLD"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="12" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="13 17" id="KW-0472">Membrane</keyword>
    <keyword evidence="14" id="KW-0594">Phospholipid biosynthesis</keyword>
    <keyword evidence="15" id="KW-1208">Phospholipid metabolism</keyword>
    <keyword evidence="20" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10" id="KW-0677">Repeat</keyword>
    <keyword evidence="7" id="KW-0964">Secreted</keyword>
    <keyword evidence="8 19" id="KW-0808">Transferase</keyword>
    <keyword evidence="9 17" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="11 17" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="17">
        <location>
            <begin position="36"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="17">
        <location>
            <begin position="67"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="domain" description="PLD phosphodiesterase" evidence="18">
        <location>
            <begin position="242"/>
            <end position="269"/>
        </location>
    </feature>
    <feature type="domain" description="PLD phosphodiesterase" evidence="18">
        <location>
            <begin position="417"/>
            <end position="444"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003145"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00018392"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023209"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00023264"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00029594"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="18">
        <source>
            <dbReference type="PROSITE" id="PS50035"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="EMBL" id="CTQ63924.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="504" mass="56773" checksum="B9995232D4164829" modified="2015-12-09" version="1">MSTHDPALQTGIADTRRVIQDAATDITVVDMVANNLGLVAGALAVVYITAVICAVREIMYSRTSQGSVAWLLSLFFIPYVTVPLYFVFGWRSFSDYAKIQITLGRSERARRADELGLTDHDETRDWPVLSRVAGVPFLAGNTSELLIDGDATFTAMKEGIARAENVIFFQFFAIHDDALGREMADALIARAKDGVEIYFLYDDVGSHSLSNKYIERLTEAGIKVCGFNENHKFLRVLGPMRLNYRNHRKLVVIDYREAFVGGHNVADQYVGRSKRFGRWRDTHVRIEGPAAVACALSFVEDWLWASGNHIDLPQVSEVPMPGDESVLVMPTGPADKLEECAIAFVEAAAQAKRRLWITTPYLVPSLDVQTALAAAAMRGVDVRILLPEKRDHWTVWLASHAYEDTLVQRGVKIYRYTDGFLHQKVTLLDDDLVSIGTVNFDNRSFQINFELTLWFTHERLISKVEKMLEEDFAHSRLTWPDAFQSRSYIFQVFAQGARLLSPIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZR98</accession>
    <name>A0A0M6ZR98_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">3-ketoacyl-CoA thiolase</fullName>
            <ecNumber evidence="4">2.3.1.16</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">fadA_1</name>
        <name evidence="4" type="ORF">LAX5112_00397</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the thiolase-like superfamily. Thiolase family.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.16" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64772.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670374.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00397"/>
    <dbReference type="EnsemblBacteria" id="CTQ64772">
        <property type="protein sequence ID" value="CTQ64772"/>
        <property type="gene ID" value="LAX5112_00397"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003988">
        <property type="term" value="F:acetyl-CoA C-acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.47.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002155">
        <property type="entry name" value="Thiolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016039">
        <property type="entry name" value="Thiolase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020617">
        <property type="entry name" value="Thiolase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020616">
        <property type="entry name" value="Thiolase_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02803">
        <property type="entry name" value="Thiolase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00108">
        <property type="entry name" value="Thiolase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000429">
        <property type="entry name" value="Ac-CoA_Ac_transf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53901">
        <property type="entry name" value="SSF53901"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 4" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Thiolase_N" evidence="2">
        <location>
            <begin position="9"/>
            <end position="224"/>
        </location>
    </feature>
    <feature type="domain" description="Thiolase_C" evidence="3">
        <location>
            <begin position="244"/>
            <end position="363"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU003557"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00108"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF02803"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ64772.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="388" mass="40741" checksum="9A299ACAABFB9840" modified="2015-12-09" version="1">MTAAMVGWAHLPFGKHSDETVESMIVKAATDAIHDAGISPEDVDEIVLGHFNAGFSAQDFTAALVLQANPALRFTPATRVENACATGSAAVHQGVRAVSSGAARFVLVVGVEQMTTTPGPEIGINLLKASYLKEDGDTPAGFAGVFGKIADSYFQKYGDQSDALAKIAAKNHKNGVGNPYAQMRKDLGYEFCRDESEKNPFVAGPLKRTDCSLVSDGAAAVVLTDPATALGMKKAVAFRGLAHVQDFLPMSKRDILKFEGCSKAWGQALGDANLAIDDLSFVETHDCFTIAELIEYEAMGLTKEGEGSRAVLEGWTEMDGKLPVNPSGGLKAKGHPIGATGVSMHVLTAMQLTGTAGDIQVKNAELGGIFNMGGAAVANYVSILQSMK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRF5</accession>
    <name>A0A0M6ZRF5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Probable membrane transporter protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">LAX5112_00363</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the 4-toluene sulfonate uptake permease (TSUP) (TC 2.A.102) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64680.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670350.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00363"/>
    <dbReference type="EnsemblBacteria" id="CTQ64680">
        <property type="protein sequence ID" value="CTQ64680"/>
        <property type="gene ID" value="LAX5112_00363"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002781">
        <property type="entry name" value="TM_pro_TauE-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01925">
        <property type="entry name" value="TauE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="55"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="115"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="153"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="186"/>
            <end position="210"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="222"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="254"/>
            <end position="271"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363041"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ64680.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="275" mass="28289" checksum="098D28FF33CD3105" modified="2015-12-09" version="1">MEDLSFVSLALLAGALLATGLVAGIIAGLLGVGGGIVIVPVLYYMFTALKIDPAILMHVAVGTSLATILATGTSSARAHYNRGSVDMDLLKRWWWAIAIGVISGAMIAGNMSGGALTLVFGVVALLVSANMLLRKEGSALADKLPGSPIKELLGFLIGGISVMMGIGGGTLGVPTLTLFNYPIRKAVGTAAAIGLIIAVPGTLMSIFFGWGAEGLPPLSLGYVNLIGFFLIIPASTFAAPLGAKIAHAIDPSKLKLIFALFLGFTGLRMIYDVMM</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRT2</accession>
    <name>A0A0M6ZRT2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Methylthioribose-1-phosphate isomerase</fullName>
            <shortName evidence="2">M1Pi</shortName>
            <shortName evidence="2">MTR-1-P isomerase</shortName>
            <ecNumber evidence="2">5.3.1.23</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="2">S-methyl-5-thioribose-1-phosphate isomerase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3" type="primary">mtnA_1</name>
        <name evidence="2" type="synonym">mtnA</name>
        <name evidence="3" type="ORF">LAX5112_00442</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>S-methyl-5-thio-alpha-D-ribose 1-phosphate = S-methyl-5-thio-D-ribulose 1-phosphate</text>
            <dbReference type="Rhea" id="RHEA:19989"/>
            <dbReference type="ChEBI" id="CHEBI:58533"/>
            <dbReference type="ChEBI" id="CHEBI:58548"/>
            <dbReference type="EC" id="5.3.1.23"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Amino-acid biosynthesis; L-methionine biosynthesis via salvage pathway; L-methionine from S-methyl-5-thio-alpha-D-ribose 1-phosphate: step 1/6.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the EIF-2B alpha/beta/delta subunits family. MtnA subfamily.</text>
    </comment>
    <dbReference type="EC" id="5.3.1.23" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64906.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670402.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00442"/>
    <dbReference type="EnsemblBacteria" id="CTQ64906">
        <property type="protein sequence ID" value="CTQ64906"/>
        <property type="gene ID" value="LAX5112_00442"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00904">
        <property type="reaction ID" value="UER00874"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046523">
        <property type="term" value="F:S-methyl-5-thioribose-1-phosphate isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019509">
        <property type="term" value="P:L-methionine salvage from methylthioadenosine"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019284">
        <property type="term" value="P:L-methionine salvage from S-adenosylmethionine"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.420">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10470">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01678">
        <property type="entry name" value="Salvage_MtnA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000649">
        <property type="entry name" value="IF-2B-related"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005251">
        <property type="entry name" value="IF-M1Pi"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042529">
        <property type="entry name" value="IF_2B-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011559">
        <property type="entry name" value="Initiation_fac_2B_a/b/d"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027363">
        <property type="entry name" value="M1Pi_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037171">
        <property type="entry name" value="NagB/RpiA_transferase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01008">
        <property type="entry name" value="IF-2B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100950">
        <property type="entry name" value="SSF100950"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00524">
        <property type="entry name" value="eIF-2B_rel"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00512">
        <property type="entry name" value="salvage_mtnA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="1 2 3" id="KW-0413">Isomerase</keyword>
    <keyword evidence="2" id="KW-0486">Methionine biosynthesis</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Substrate binding" evidence="2">
        <location>
            <begin position="53"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="2">
        <location>
            <begin position="253"/>
            <end position="254"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="2">
        <location>
            <position position="243"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="90"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="203"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="site" description="Transition state stabilizer" evidence="2">
        <location>
            <position position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01678"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ64906.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="367" mass="40068" checksum="245161614DBD6EAE" modified="2015-12-09" version="1">MKVNGTQYRSLWWDAELNCLQIIDQRWLPHEFRTQPVRTLQEFADAIVEMRVRGAPLIGATAAYGVALAMANDPSDANLDAAWTFLEKTRPTAINLRWALNRCRTALKPLPVESRAAAALQLAHDISDEDVEINRRIGENGLKLIRDIAAQKPDGEPVQLLTHCNAGWIATVDWGTATSPMYQAHDTGIPLHVWVDETRPRNQGALTSWELGSHGVPHTYITDNAGGHLMQHGLVDMVIVGTDRTTRRGDVCNKIGTYLKALAARDNNVPFYVALPSPTIDWSVSDGVSEIPIEERSERETTHIQGKSDEGAIGVVQVTPDGTSGGNPAFDVTPNRLVTGLITERGICEASSEGLAGLFPEMAQAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZT96</accession>
    <name>A0A0M6ZT96_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">TRAP-type C4-dicarboxylate transport system, small permease component</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">LAX5112_00352</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
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        <property type="protein sequence ID" value="CTQ64653.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
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    <dbReference type="EnsemblBacteria" id="CTQ64653">
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        <property type="gene ID" value="LAX5112_00352"/>
    </dbReference>
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        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="entry name" value="TRAP_DctQ"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35011">
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04290">
        <property type="entry name" value="DctQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
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    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
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    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="35"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="63"/>
            <end position="83"/>
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    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
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            <end position="128"/>
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    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="148"/>
            <end position="167"/>
        </location>
    </feature>
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        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ64653.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="214" mass="23801" checksum="E62EC1D02073D94E" modified="2015-12-09" version="1">MNTSPQTGGSESDRPTTYIRFDGWLGHVENGFNMIAAFSILSLMFLAVAQVLGRLFFNTPIPGFIDITEQAMAIFAFAGVAYCQRVGGHIRMEIVLGKLRGRTLYIFEMIGVIVIAFTVALLIWGSLYHFDRSWSIGDSTMDIRLPTWPSKLVIPVALSLLFLRLLMQIYGYARLVRNPDLEPVAVPVIEDVEKVAQHEIEEAFGDDAVAGDTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
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        <submittedName>
            <fullName evidence="8">Neu5Ac permease</fullName>
        </submittedName>
    </protein>
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        <name type="scientific">Roseibium alexandrii</name>
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            </authorList>
        </citation>
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            <strain evidence="9">CECT 5112</strain>
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    </dbReference>
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        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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    </dbReference>
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        <property type="entry name" value="DctQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
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        <location>
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    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="132"/>
            <end position="153"/>
        </location>
    </feature>
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        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
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    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
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    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
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            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
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        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ65492.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="174" mass="19399" checksum="6B412032ADA545E4" modified="2015-12-09" version="1">MVQDWAAITSERVNKVVEFVVAGLMLALVLDVWLGVVDRYYFRWQLPWPETLARYLMIWAAMLAVSSGIARRDHIGLTAFVMIFPFSIRRLVLIAVDVLSLALFLYVAWYGIAFAQSGAPRHAMIFGMSLAPFYAAIPVSAALCSVQLVLVLLRDLGGHLDKPVFSEPVLEDAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZV32</accession>
    <name>A0A0M6ZV32_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
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    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66096.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ66096">
        <property type="protein sequence ID" value="CTQ66096"/>
        <property type="gene ID" value="LAX5112_00868"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ66096.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="42" mass="4257" checksum="416133AD351C8D1E" modified="2015-12-09" version="1">MKAMLTAFAALIVLTIGASQVLNRAGFSSAEQGSSSSVRLGD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVA8</accession>
    <name>A0A0M6ZVA8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Tryptophan 2,3-dioxygenase</fullName>
            <shortName evidence="7">TDO</shortName>
            <ecNumber evidence="7">1.13.11.11</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Tryptamin 2,3-dioxygenase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">Tryptophan oxygenase</fullName>
            <shortName evidence="7">TO</shortName>
            <shortName evidence="7">TRPO</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">Tryptophan pyrrolase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">Tryptophanase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7 8" type="primary">kynA</name>
        <name evidence="8" type="ORF">LAX5112_00897</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L-tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>L-tryptophan + O2 = N-formyl-L-kynurenine</text>
            <dbReference type="Rhea" id="RHEA:24536"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:57912"/>
            <dbReference type="ChEBI" id="CHEBI:58629"/>
            <dbReference type="EC" id="1.13.11.11"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="7">
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </cofactor>
        <text evidence="7">Binds 1 heme group per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="7">Amino-acid degradation; L-tryptophan degradation via kynurenine pathway; L-kynurenine from L-tryptophan: step 1/2.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Homotetramer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the tryptophan 2,3-dioxygenase family.</text>
    </comment>
    <dbReference type="EC" id="1.13.11.11" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66176.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670856.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00897"/>
    <dbReference type="EnsemblBacteria" id="CTQ66176">
        <property type="protein sequence ID" value="CTQ66176"/>
        <property type="gene ID" value="LAX5112_00897"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00333">
        <property type="reaction ID" value="UER00453"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004833">
        <property type="term" value="F:tryptophan 2,3-dioxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019441">
        <property type="term" value="P:tryptophan catabolic process to kynurenine"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01972">
        <property type="entry name" value="T23O"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037217">
        <property type="entry name" value="Trp/Indoleamine_2_3_dOase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017485">
        <property type="entry name" value="Trp_2-3-dOase_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004981">
        <property type="entry name" value="Trp_2_3_dOase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10138">
        <property type="entry name" value="PTHR10138"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03301">
        <property type="entry name" value="Trp_dioxygenase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF140959">
        <property type="entry name" value="SSF140959"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03036">
        <property type="entry name" value="trp_2_3_diox"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 7 8" id="KW-0223">Dioxygenase</keyword>
    <keyword evidence="1 7" id="KW-0349">Heme</keyword>
    <keyword evidence="5 7" id="KW-0408">Iron</keyword>
    <keyword evidence="2 7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4 7 8" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 7" id="KW-0823">Tryptophan catabolism</keyword>
    <feature type="region of interest" description="Substrate binding" evidence="7">
        <location>
            <begin position="54"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="116"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="120"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="7">
        <location>
            <position position="243"/>
        </location>
        <ligand>
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="257"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022964"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023079"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01972"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ66176.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="285" mass="32756" checksum="46BB7FB346091E6F" modified="2015-12-09" version="1">MNNKNETQQGGYDPEAEGAEMAFSGKMSYGDYLGLETILSSQAPLSDAPDELLFIIQHQTSELWMKLMLHELEGARTAIAEDHMPEAMKLLARVSRIMEQLNSAWDVLRTMTPSDYTQFRDSLGLSSGFQSLQYRLIEYALGNRNLAMIRPHEHVPENVDLLHQELAKPSLYQVVLSFAQRQGLDVPDHVIADPSDKPHGEVPEIMDLWQKVYRDPAQYWALYEVGEKLVDLEDYFRRWRFNHVTTVERVIGFKRGTGGTGGVTYLKRMLEVELFPELWHVRTEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZW22</accession>
    <name>A0A0M6ZW22_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">TRAP-type C4-dicarboxylate transport system, small permease component</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">LAX5112_01165</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66979.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671012.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01165"/>
    <dbReference type="EnsemblBacteria" id="CTQ66979">
        <property type="protein sequence ID" value="CTQ66979"/>
        <property type="gene ID" value="LAX5112_01165"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007387">
        <property type="entry name" value="TRAP_DctQ"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35011">
        <property type="entry name" value="PTHR35011"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04290">
        <property type="entry name" value="DctQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="20"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="63"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="99"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="144"/>
            <end position="170"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ66979.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="182" mass="19954" checksum="2135EC416E69F2DB" modified="2015-12-09" version="1">MAGHSSAAVAHAGNNPFLRAVAAISTVAGWCSAAMIVAAVAITCQMIFVRFVLNGSTVWQTEAVIYLVIAATLVGLPYVQRLRGHVNVDLVPLSLPPRARFFLALVTLSLSILIVGIMLFYGFEYWHFAWDRGWRSDTVWGVRLWIPYLSLPVGFGLLLLQLIADLVAVITRVDRPFGLEDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZW79</accession>
    <name>A0A0M6ZW79_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative enoyl-[acyl-carrier-protein] reductase II</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01184</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67029.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671026.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01184"/>
    <dbReference type="EnsemblBacteria" id="CTQ67029">
        <property type="protein sequence ID" value="CTQ67029"/>
        <property type="gene ID" value="LAX5112_01184"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018580">
        <property type="term" value="F:nitronate monooxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd04730">
        <property type="entry name" value="NPD_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004136">
        <property type="entry name" value="NMO"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03060">
        <property type="entry name" value="NMO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809124" evidence="1">
        <location>
            <begin position="21"/>
            <end position="329"/>
        </location>
    </feature>
    <feature type="domain" description="NMO" evidence="2">
        <location>
            <begin position="56"/>
            <end position="314"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF03060"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ67029.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="329" mass="34844" checksum="F20BF1A449E76EAF" modified="2015-12-09" version="1">MLKSKTLPKALQGLRLPAVAAPLFIVSGPDLVIAQCKAGIVGSFPALNAREKDGEPIMLEIWLKQITEELDRYNQANPDTPAAPFAVNQIVHRSNGRLERDLEICARWKVPIWITSLGARVEVNEAAHSCGGITLHDIINNTFAKKAIQKGADGLIAVAAGAGGHAGQQSPFALIREIREWFDGPLLLSGSISTGEALLAARTLGADLGYVGSAFIATEEANAQADYKQMLVESGAEDIVTSSLFTGVSGNYLAPSISRAGLDPANLPSADPSSMNFSSGSSKAKAWKEIWGAGQGIGALKSIVPAGKVVDRIEQEYRDAKQRICSDLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWI5</accession>
    <name>A0A0M6ZWI5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Chemotaxis protein CheY</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">cheY_1</name>
        <name evidence="4" type="ORF">LAX5112_00954</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66400.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008191546.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00954"/>
    <dbReference type="EnsemblBacteria" id="CTQ66400">
        <property type="protein sequence ID" value="CTQ66400"/>
        <property type="gene ID" value="LAX5112_00954"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="3">
        <location>
            <begin position="1"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="133"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="1">
        <location>
            <position position="41"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ66400.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="157" mass="16840" checksum="3C079F4238D3FB79" modified="2015-12-09" version="1">MRTILRSVVGGFGVRTICEATEGAEALELVVDRKPDIVLCDWNMSPFGGADFLRILRKDTDPIIKTTPVLVITAHARRPIILEALNIGIHGLVAKPVAPAVLYRHIGEILQRQELQGRSTGISMPGMPGHTGGSVLDLSSMAPDQPADAEDQSLALL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWK0</accession>
    <name>A0A0M6ZWK0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Phage head morphogenesis protein, SPP1 gp7 family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_01232</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67145.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671070.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01232"/>
    <dbReference type="EnsemblBacteria" id="CTQ67145">
        <property type="protein sequence ID" value="CTQ67145"/>
        <property type="gene ID" value="LAX5112_01232"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003540">
        <property type="entry name" value="ADP-ribosyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006528">
        <property type="entry name" value="Phage_head_morphogenesis_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03496">
        <property type="entry name" value="ADPrib_exo_Tox"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04233">
        <property type="entry name" value="Phage_Mu_F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01641">
        <property type="entry name" value="phageSPP1_gp7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Phage_Mu_F" evidence="3">
        <location>
            <begin position="152"/>
            <end position="259"/>
        </location>
    </feature>
    <feature type="domain" description="ADPrib_exo_Tox" evidence="2">
        <location>
            <begin position="367"/>
            <end position="526"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="285"/>
            <end position="335"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF03496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF04233"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ67145.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="584" mass="66059" checksum="2126659D97F5920D" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWP8</accession>
    <name>A0A0M6ZWP8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Holo-[acyl-carrier-protein] synthase</fullName>
            <shortName evidence="8">Holo-ACP synthase</shortName>
            <ecNumber evidence="8">2.7.8.7</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">4'-phosphopantetheinyl transferase AcpS</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8 10" type="primary">acpS</name>
        <name evidence="10" type="ORF">LAX5112_01061</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>apo-[ACP] + CoA = adenosine 3',5'-bisphosphate + H(+) + holo-[ACP]</text>
            <dbReference type="Rhea" id="RHEA:12068"/>
            <dbReference type="Rhea" id="RHEA-COMP:9685"/>
            <dbReference type="Rhea" id="RHEA-COMP:9690"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:58343"/>
            <dbReference type="ChEBI" id="CHEBI:64479"/>
            <dbReference type="EC" id="2.7.8.7"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="8">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the P-Pant transferase superfamily. AcpS family.</text>
    </comment>
    <dbReference type="EC" id="2.7.8.7" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66697.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670941.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01061"/>
    <dbReference type="EnsemblBacteria" id="CTQ66697">
        <property type="protein sequence ID" value="CTQ66697"/>
        <property type="gene ID" value="LAX5112_01061"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008897">
        <property type="term" value="F:holo-[acyl-carrier-protein] synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006633">
        <property type="term" value="P:fatty acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.470.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00101">
        <property type="entry name" value="AcpS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008278">
        <property type="entry name" value="4-PPantetheinyl_Trfase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037143">
        <property type="entry name" value="4-PPantetheinyl_Trfase_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002582">
        <property type="entry name" value="ACPS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004568">
        <property type="entry name" value="Ppantetheine-prot_Trfase_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01648">
        <property type="entry name" value="ACPS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56214">
        <property type="entry name" value="SSF56214"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00516">
        <property type="entry name" value="acpS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00556">
        <property type="entry name" value="pantethn_trn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7 8" id="KW-0275">Fatty acid biosynthesis</keyword>
    <keyword evidence="4 8" id="KW-0276">Fatty acid metabolism</keyword>
    <keyword evidence="1 8" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="6 8" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="5 8" id="KW-0460">Magnesium</keyword>
    <keyword evidence="3 8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 8 10" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="ACPS" evidence="9">
        <location>
            <begin position="4"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="8"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="57"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022832"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023160"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00101"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF01648"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ66697.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="143" mass="15676" checksum="1283030A34550DFB" modified="2015-12-09" version="1">MILGIGSDLIDIRRIEKTLDRFGERFTNRVFTEVERAKSDRRAQRAASYAKRFAAKEACSKALGSGIRMGVAWREMGVVNLPSGKPTISLTGGASDRLNAMIPEGFKATINLTITDDFPLAQAFVVISAWPEDWPEPPSTTSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWR8</accession>
    <name>A0A0M6ZWR8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 6">Signal peptidase I</fullName>
            <ecNumber evidence="3 6">3.4.21.89</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">lepB</name>
        <name evidence="8" type="ORF">LAX5112_01062</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 6">
            <text>Cleavage of hydrophobic, N-terminal signal or leader sequences from secreted and periplasmic proteins.</text>
            <dbReference type="EC" id="3.4.21.89"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Membrane</location>
            <topology evidence="6">Single-pass type II membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the peptidase S26 family.</text>
    </comment>
    <dbReference type="EC" id="3.4.21.89" evidence="3 6"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66701.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008189074.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01062"/>
    <dbReference type="EnsemblBacteria" id="CTQ66701">
        <property type="protein sequence ID" value="CTQ66701"/>
        <property type="gene ID" value="LAX5112_01062"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004252">
        <property type="term" value="F:serine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006465">
        <property type="term" value="P:signal peptide processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06530">
        <property type="entry name" value="S26_SPase_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036286">
        <property type="entry name" value="LexA/Signal_pep-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000223">
        <property type="entry name" value="Pept_S26A_signal_pept_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019758">
        <property type="entry name" value="Pept_S26A_signal_pept_1_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019757">
        <property type="entry name" value="Pept_S26A_signal_pept_1_Lys-AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019533">
        <property type="entry name" value="Peptidase_S26"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43390">
        <property type="entry name" value="PTHR43390"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10502">
        <property type="entry name" value="Peptidase_S26"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00727">
        <property type="entry name" value="LEADERPTASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51306">
        <property type="entry name" value="SSF51306"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02227">
        <property type="entry name" value="sigpep_I_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00760">
        <property type="entry name" value="SPASE_I_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00761">
        <property type="entry name" value="SPASE_I_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0645">Protease</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="20"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_S26" evidence="7">
        <location>
            <begin position="16"/>
            <end position="222"/>
        </location>
    </feature>
    <feature type="active site" evidence="5">
        <location>
            <position position="45"/>
        </location>
    </feature>
    <feature type="active site" evidence="5">
        <location>
            <position position="106"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000677"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00013208"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00019232"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR600223-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU362042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF10502"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ66701.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="250" mass="28339" checksum="00D8EECEAFFAC2B0" modified="2015-12-09" version="1">MSVTENGKDKEGGVYETVKVIIQALLIALVVRTFLFQPFNIPSGSMKDTLLIGDYLFVSKFSYGYSRYSFPFGLAPISGRVWDAEPERGDIAVFKLPTDTSIDYIKRVIGLPGDTVQMIDGVVHINGEAVPRVRIDDYIEESSSGAVRRVPRYRETLPNGVSYDTLDITDRGQLDNTREYKVPEGHYFMMGDNRDNSVDSRVLSRVGYVPYDNFIGRAEILFFSIGDGTPAWQIWTWPWTVRWDRIGRGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWS7</accession>
    <name>A0A0M6ZWS7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Acyl-CoA thioester hydrolase, YbgC/YbaW family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01071</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66727.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670947.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ66727">
        <property type="protein sequence ID" value="CTQ66727"/>
        <property type="gene ID" value="LAX5112_01071"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029069">
        <property type="entry name" value="HotDog_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54637">
        <property type="entry name" value="SSF54637"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ66727.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="151" mass="17174" checksum="E43C42F6300790A4" modified="2015-12-09" version="1">MTANKTAAPERKKPLERSDFRSFLEIPTRWMDVDMYGHVNNVQYLSYFDTAVNSWYIENGLLDPVRGETVFLVAETGCNYFAELLFPSNVSAGLRIEQIGKSSVVFRVGLFSGEDLQTAAHGRFVHIHVDRQTRRPVPISHKTRKVLETLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWW6</accession>
    <name>A0A0M6ZWW6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Neu5Ac permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">siaT_7</name>
        <name evidence="5" type="ORF">LAX5112_00846</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66034.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040450982.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00846"/>
    <dbReference type="EnsemblBacteria" id="CTQ66034">
        <property type="protein sequence ID" value="CTQ66034"/>
        <property type="gene ID" value="LAX5112_00846"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010656">
        <property type="entry name" value="DctM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004681">
        <property type="entry name" value="TRAP_DctM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33362">
        <property type="entry name" value="PTHR33362"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06808">
        <property type="entry name" value="DctM"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="12"/>
            <end position="36"/>
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</entry>
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</entry>
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        <source>
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    </evidence>
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</entry>
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    <accession>A0A0M6ZYW8</accession>
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        <submittedName>
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                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
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            <strain evidence="5">CECT 5112</strain>
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        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809044" evidence="2">
        <location>
            <begin position="21"/>
            <end position="251"/>
        </location>
    </feature>
    <feature type="domain" description="PBPb" evidence="3">
        <location>
            <begin position="99"/>
            <end position="204"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00497"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ67849.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="251" mass="27684" checksum="2CA1E1B9CA807CAE" modified="2015-12-09" version="1">MRCALALSAFIIATPSLSWAADTLRLTTLHWPPYVEESGEGPNTNTVRSTFARAGIEVDVQLFPWNRAIMLAADDPNWIGVYPEYYSADIDAEASGDRCLFSRPFGNSPVGFLTPSNSSFDWDTHDDLRSYVIGVVRGYVNEAKLDQMIADGDIVGELAENDTQNILKVAARRADAIVIDKNVFDYLKAEDAGVAFVADSLQFHEKLLINHSLYVCFENSSAGREARELFNRHLTTSGDEGQSDPGLPNTQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZ55</accession>
    <name>A0A0M6ZZ55_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transglutaminase-like superfamily protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01401</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67462.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671239.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01401"/>
    <dbReference type="EnsemblBacteria" id="CTQ67462">
        <property type="protein sequence ID" value="CTQ67462"/>
        <property type="gene ID" value="LAX5112_01401"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002931">
        <property type="entry name" value="Transglutaminase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01841">
        <property type="entry name" value="Transglut_core"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00460">
        <property type="entry name" value="TGc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="SSF54001"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TGc" evidence="1">
        <location>
            <begin position="158"/>
            <end position="218"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00460"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67462.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="259" mass="27980" checksum="7C952CDBF5E1D9EF" modified="2015-12-09" version="1">MILNLEARLAYRTQQPTDVLLQLEAADLPDQTVVSAHIDFSDISNFARVPAESGLGERIWLRTEGDFRCDYSARLDLNRPHLDISGFGAVPPHLLPGDTVRYLLPSRYCPSDEFQAFVAAEFGHLTGGARIAAIRDWIHSTFSYAPGSSNAQTTALDSFVQRQGVCRDFAHVLITLARASAIPARFVSVYAPGASPPDFHAVAEIYLDGDWHLIDATGMASADSIARIGVGADAADVAFMTSFSPLELVAQSVSVTVSQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZ83</accession>
    <name>A0A0M6ZZ83_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01650</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68138.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671416.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ68138">
        <property type="protein sequence ID" value="CTQ68138"/>
        <property type="gene ID" value="LAX5112_01650"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809150" evidence="1">
        <location>
            <begin position="26"/>
            <end position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68138.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="164" mass="17440" checksum="B755847CE1C441C6" modified="2015-12-09" version="1">MRHLILAGLCALTLAACQSSNTQQASLGNQPQLTVPQGAQSVKVAADPMTVRSALVSSAQERGTIVIQDEPNMVVMERQLTGENPALDSQFGPSDNGNRVIRIRLRFTGTPCETLVVQDLAVINNVRTGLEQSFVLPGNPNTMQSLQGLKSRAEQSSSCPPVAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZA8</accession>
    <name>A0A0M6ZZA8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Haloacetate dehalogenase H-1</fullName>
            <ecNumber evidence="2">3.8.1.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">dehH1_1</name>
        <name evidence="2" type="ORF">LAX5112_01463</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.8.1.3" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67641.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671283.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01463"/>
    <dbReference type="EnsemblBacteria" id="CTQ67641">
        <property type="protein sequence ID" value="CTQ67641"/>
        <property type="gene ID" value="LAX5112_01463"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018785">
        <property type="term" value="F:haloacetate dehalogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000073">
        <property type="entry name" value="AB_hydrolase_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00561">
        <property type="entry name" value="Abhydrolase_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00111">
        <property type="entry name" value="ABHYDROLASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AB hydrolase-1" evidence="1">
        <location>
            <begin position="21"/>
            <end position="124"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00561"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67641.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="251" mass="27475" checksum="CCFB5C28C0118326" modified="2015-12-09" version="1">MPVFEQDGVQIAYLDEGEGDPILLIHGFASNKAVNWQNTGWVDLFVKEGRRVIALDNRGHGDSQKFHDPEAYGAPIMAQDARKLLDHLGIEQTDVMGYSMGARISAFLTLNHPQRVKRAIFSGLGYGMIEGVGDPEPIAAALEADRLQDVTDRTGRAFRAFAEQTKSDRLALAACMRSSRQKISEEDIARIERPVLVAVGTRDDIAGSPHKLAALMQHADVLEIPGRDHMVAVGDKVHKQGVLAFLNNVDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZP2</accession>
    <name>A0A0M6ZZP2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">H(+)/Cl(-) exchange transporter ClcA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">clcA_2</name>
        <name evidence="6" type="ORF">LAX5112_01635</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68099.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671404.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01635"/>
    <dbReference type="EnsemblBacteria" id="CTQ68099">
        <property type="protein sequence ID" value="CTQ68099"/>
        <property type="gene ID" value="LAX5112_01635"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005247">
        <property type="term" value="F:voltage-gated chloride channel activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014743">
        <property type="entry name" value="Cl-channel_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001807">
        <property type="entry name" value="Cl-channel_volt-gated"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00654">
        <property type="entry name" value="Voltage_CLC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00762">
        <property type="entry name" value="CLCHANNEL"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81340">
        <property type="entry name" value="SSF81340"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="33"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="79"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="205"/>
            <end position="231"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="252"/>
            <end position="273"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="285"/>
            <end position="310"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="322"/>
            <end position="344"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="350"/>
            <end position="370"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="382"/>
            <end position="407"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="413"/>
            <end position="433"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ68099.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="549" mass="57947" checksum="39DCAFE9E5382694" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZX1</accession>
    <name>A0A0M6ZZX1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01511</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67766.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671318.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01511"/>
    <dbReference type="EnsemblBacteria" id="CTQ67766">
        <property type="protein sequence ID" value="CTQ67766"/>
        <property type="gene ID" value="LAX5112_01511"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035220">
        <property type="entry name" value="DUF5330"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17264">
        <property type="entry name" value="DUF5330"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="98"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="98"/>
            <end position="133"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67766.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="147" mass="15630" checksum="315643BBE6382929" modified="2015-12-09" version="1">MFFLLRTAFWLTLVLVLIPIGSETESTPVEPINPVSAFIAAQATMSDIGGFCDRNPQACETGGSALTVIGSRARDGARIVYEYLDTQIADTDPLETVITGSTNVQPTSDQSSTTSPQPVDGVTESTQVQESDIGPTPRPKPRSGQKT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A021</accession>
    <name>A0A0M7A021_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Sarcosine oxidase, gamma subunit family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01698</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68335.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01698"/>
    <dbReference type="EnsemblBacteria" id="CTQ68335">
        <property type="protein sequence ID" value="CTQ68335"/>
        <property type="gene ID" value="LAX5112_01698"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1360.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006222">
        <property type="entry name" value="GCV_T_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027266">
        <property type="entry name" value="TrmE/GcvT_dom1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01571">
        <property type="entry name" value="GCV_T"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GCV_T" evidence="1">
        <location>
            <begin position="80"/>
            <end position="187"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01571"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68335.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="190" mass="20736" checksum="FA7737F29A8C3C90" modified="2015-12-09" version="1">MAEWRSALKGQLPLGKVGTSDGIGVTFSEVTRFSLFQIAAWPETWKPAGAKAARLAGTETAPGPGMMAQGAKGTLLRIEPLKWWLISRDDRKNRISLAIEDGVVLDLSSSRTWINLNGPNATHLLNNFLPVNLSDTAFPTGSVASSAFHHIGITLWRDEHGFNLLLPRSFAFSLWEQLTDSAAQYGYAVI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0A0</accession>
    <name>A0A0M7A0A0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 8 11">50S ribosomal protein L22</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8 12" type="primary">rplV</name>
        <name evidence="12" type="ORF">LAX5112_01731</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.</text>
    </comment>
    <comment type="function">
        <text evidence="7">This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.</text>
    </comment>
    <comment type="function">
        <text evidence="8 11">This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g., L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.</text>
    </comment>
    <comment type="subunit">
        <text evidence="8 10">Part of the 50S ribosomal subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 8 9">Belongs to the universal ribosomal protein uL22 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68415.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008197234.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01731"/>
    <dbReference type="EnsemblBacteria" id="CTQ68415">
        <property type="protein sequence ID" value="CTQ68415"/>
        <property type="gene ID" value="LAX5112_01731"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015934">
        <property type="term" value="C:large ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00336">
        <property type="entry name" value="Ribosomal_L22"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.470.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01331_B">
        <property type="entry name" value="Ribosomal_L22_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001063">
        <property type="entry name" value="Ribosomal_L22"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018260">
        <property type="entry name" value="Ribosomal_L22/L17_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036394">
        <property type="entry name" value="Ribosomal_L22/L17_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005727">
        <property type="entry name" value="Ribosomal_L22_bac/chlpt-type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13501">
        <property type="entry name" value="PTHR13501"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00237">
        <property type="entry name" value="Ribosomal_L22"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54843">
        <property type="entry name" value="SSF54843"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01044">
        <property type="entry name" value="rplV_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00464">
        <property type="entry name" value="RIBOSOMAL_L22"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 8 9" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="5 8 9" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="4 8 10" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="3 8 10" id="KW-0699">rRNA-binding</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009451"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00021205"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00025084"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01331"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU004005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU004006"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU004008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ68415.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="126" mass="13989" checksum="9E720728077644E2" modified="2015-12-09" version="1">MGKPKRERVLADNEARAMTRMIRVSPRKLNLVAAAIRGKKVGSAIADLTFSRKRIAQDVKKTLMSAIANAENNHDLDIDNLVVAEAHVGKAFVIKRFQARARGRVGRIEKPFSNLTIVVREVEESA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0I6</accession>
    <name>A0A0M7A0I6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Demethylmenaquinone methyltransferase</fullName>
            <ecNumber evidence="2">2.1.1.163</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ubiE_2</name>
        <name evidence="2" type="ORF">LAX5112_01319</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.1.1.163" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67304.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671141.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67304">
        <property type="protein sequence ID" value="CTQ67304"/>
        <property type="gene ID" value="LAX5112_01319"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043770">
        <property type="term" value="F:demethylmenaquinone methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102094">
        <property type="term" value="F:S-adenosylmethionine:2-demethylmenaquinol methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102955">
        <property type="term" value="F:S-adenosylmethionine:2-demethylmenaquinol-7 methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102027">
        <property type="term" value="F:S-adenosylmethionine:2-demethylquinol-8 methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041698">
        <property type="entry name" value="Methyltransf_25"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13649">
        <property type="entry name" value="Methyltransf_25"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Methyltransf_25" evidence="1">
        <location>
            <begin position="50"/>
            <end position="145"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13649"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67304.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="266" mass="28657" checksum="09589BCE2E123EE2" modified="2015-12-09" version="1">MELSKFKALNDVDSVNAYISALEAFDGIVELQELKDLARVRGGVAEGKSILDVGCGFGLETGRLANVAGAQGFVSGLDKSADFIREAQKRAEAAGQSIDYQTGDATALPYGDNSFDCVRAERILIYLSDVSAALSEMRRVLKPSGKIALIEPDFSTNTINISDRTLARRVLDHEIKTAVENSFLPGSLMVTLENLGFANIEISSRALIFPQELAASYFSSLADNALKSGKITTSENGAWQTELDDLKAHNAIFATISYFLFTADAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="32" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0P1</accession>
    <name>A0A0M7A0P1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6 8">Adenylate kinase</fullName>
            <shortName evidence="6">AK</shortName>
            <ecNumber evidence="6 8">2.7.4.3</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">ATP-AMP transphosphorylase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">ATP:AMP phosphotransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">Adenylate monophosphate kinase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6 9" type="primary">adk</name>
        <name evidence="9" type="ORF">LAX5112_01747</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6 8">
            <text>AMP + ATP = 2 ADP</text>
            <dbReference type="Rhea" id="RHEA:12973"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.4.3"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="6">Purine metabolism; AMP biosynthesis via salvage pathway; AMP from ADP: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6 8">Monomer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6 8">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="domain">
        <text evidence="6">Consists of three domains, a large central CORE domain and two small peripheral domains, NMPbind and LID, which undergo movements during catalysis. The LID domain closes over the site of phosphoryl transfer upon ATP binding. Assembling and dissambling the active center during each catalytic cycle provides an effective means to prevent ATP hydrolysis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 6 7">Belongs to the adenylate kinase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.7.4.3" evidence="6 8"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68459.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040450743.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01747"/>
    <dbReference type="EnsemblBacteria" id="CTQ68459">
        <property type="protein sequence ID" value="CTQ68459"/>
        <property type="gene ID" value="LAX5112_01747"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00588">
        <property type="reaction ID" value="UER00649"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004017">
        <property type="term" value="F:adenylate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044209">
        <property type="term" value="P:AMP salvage"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01428">
        <property type="entry name" value="ADK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00235">
        <property type="entry name" value="Adenylate_kinase_Adk"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006259">
        <property type="entry name" value="Adenyl_kin_sub"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000850">
        <property type="entry name" value="Adenylat/UMP-CMP_kin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033690">
        <property type="entry name" value="Adenylat_kinase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23359">
        <property type="entry name" value="PTHR23359"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00094">
        <property type="entry name" value="ADENYLTKNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01351">
        <property type="entry name" value="adk"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00113">
        <property type="entry name" value="ADENYLATE_KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 6 7" id="KW-0418">Kinase</keyword>
    <keyword evidence="3 6" id="KW-0545">Nucleotide biosynthesis</keyword>
    <keyword evidence="4 6 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6 7" id="KW-0808">Transferase</keyword>
    <feature type="region of interest" description="NMP" evidence="6">
        <location>
            <begin position="30"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="10"/>
            <end position="15"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="31"/>
        </location>
        <ligand>
            <name>AMP</name>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="36"/>
        </location>
        <ligand>
            <name>AMP</name>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="57"/>
            <end position="59"/>
        </location>
        <ligand>
            <name>AMP</name>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="85"/>
            <end position="88"/>
        </location>
        <ligand>
            <name>AMP</name>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="92"/>
        </location>
        <ligand>
            <name>AMP</name>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="127"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="139"/>
        </location>
        <ligand>
            <name>AMP</name>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="150"/>
        </location>
        <ligand>
            <name>AMP</name>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="178"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007220"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022727"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003330"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU003331"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ68459.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="198" mass="21216" checksum="079905F9DB896D7B" modified="2015-12-09" version="1">MRLILVGPPGAGKGTQAARLVEKYGIPQLSTGDMLRAAVAAETPVGLQAKAVMDAGGLVSDDIVVGIIRDRIAEDDAKKGFILDGFPRTLAQAEALDDMLSENSLKLNAVIELRVDQTKLVGRIINRAEEAKAAGQPVRKDDDPEVFKDRLDAYNRDTAVVVPYYEKTGLLSVIDGMQAIDDVTASIESVLQGLDEKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0R5</accession>
    <name>A0A0M7A0R5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01363</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67384.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671171.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01363"/>
    <dbReference type="EnsemblBacteria" id="CTQ67384">
        <property type="protein sequence ID" value="CTQ67384"/>
        <property type="gene ID" value="LAX5112_01363"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67384.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="493" mass="55121" checksum="176CA7D9D3AD5BE1" modified="2015-12-09" version="1">MTQLDQLQTKIRTYLSSLSPKAIEALVRNLERAKAQADADPNIELVLNSALAILRKPTTHPLDSEGNEHRRGQIQRMFFTSLDGFLIDEFLPNRQEGRIHRGMLNKVWKWLGRDVMPTDVQLVLEQAGNAAVSGERVDGLVQALRTRSADAIGEALRRGEIDDREHRRMGIELGGERGISELRDIHKVFSSERWLMPFLEAMPDRINERRLKQDHDVLRMVDKCSERFPDHLPLVAAALVDRADKPSALCAFAGRLAGDDDPKVIAGSQFAPFVDVVMSEAERLNILAVDHRNNNPDPVAFSNALSDYNSLVRGIERDVDLTVTGKWHSRLADTKRSISDVVTRELHNAHTAVRRALQVPKLDDDGKLILDQTAINDAVRAVRVVNMVRHGSETFAVNDISKRTRQTVEQTLEIVTRSLITDLGKAKSPQLEAHQAAADVAIMLSEIYFGAEYADQLRRSRHAALAKAKTRAGDETAAATPERRLINKALKRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A157</accession>
    <name>A0A0M7A157_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Phosphatidate cytidylyltransferase</fullName>
            <ecNumber evidence="7">2.7.7.41</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">cdsA_1</name>
        <name evidence="9" type="ORF">LAX5112_01658</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>a 1,2-diacyl-sn-glycero-3-phosphate + CTP + H(+) = a CDP-1,2-diacyl-sn-glycerol + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:16229"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:37563"/>
            <dbReference type="ChEBI" id="CHEBI:58332"/>
            <dbReference type="ChEBI" id="CHEBI:58608"/>
            <dbReference type="EC" id="2.7.7.41"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="7">Phospholipid metabolism; CDP-diacylglycerol biosynthesis; CDP-diacylglycerol from sn-glycerol 3-phosphate: step 3/3.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the CDS family.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.41" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68162.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671424.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01658"/>
    <dbReference type="EnsemblBacteria" id="CTQ68162">
        <property type="protein sequence ID" value="CTQ68162"/>
        <property type="gene ID" value="LAX5112_01658"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00557">
        <property type="reaction ID" value="UER00614"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004605">
        <property type="term" value="F:phosphatidate cytidylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016024">
        <property type="term" value="P:CDP-diacylglycerol biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000374">
        <property type="entry name" value="PC_trans"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01315">
        <property type="entry name" value="CDS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="7 9" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7 9" id="KW-0808">Transferase</keyword>
    <keyword evidence="4 7 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="7"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="47"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="111"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="145"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="177"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="218"/>
            <end position="237"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="243"/>
            <end position="263"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010185"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003938"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ68162.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="308" mass="34289" checksum="7785D3A9F9084555" modified="2015-12-09" version="1">MTLQAIHWALIGIWGLLTAASLIVYILSKRSEKNLSELVQRTQSWWVMVAIFTVAFLVSNTISIIVFALISFLALKEYFSMIPTRRADRRVLFWAYLSIPVQYFWVYDSYYGMFAVFIPVYMFLFLPFASLLSQQTEGFLKSVGTLNWGLMLCVFSISHAAFLLILPPIESNSAGGAGLLLFLVFLTQFNDVAQYTWGKLFGRRKIIPGVSPNKTWEGFLGGVGTTFVLAIVTAPLVTPFNLAHAAAAGLLIPVAGFIGDVTVSALKRDLGVKDTGSLIPGHGGILDRIDSLTFTAPLFFHFTRYFYY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1J7</accession>
    <name>A0A0M7A1J7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Octopine transport system permease protein OccM</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">occM_1</name>
        <name evidence="10" type="ORF">LAX5112_01941</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="8">Cell membrane</location>
            <topology evidence="8">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68938.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008190950.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01941"/>
    <dbReference type="EnsemblBacteria" id="CTQ68938">
        <property type="protein sequence ID" value="CTQ68938"/>
        <property type="gene ID" value="LAX5112_01941"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006865">
        <property type="term" value="P:amino acid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010065">
        <property type="entry name" value="AA_ABC_transptr_permease_3TM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043429">
        <property type="entry name" value="ArtM/GltK/GlnP/TcyL/YhdX-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30614">
        <property type="entry name" value="PTHR30614"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01726">
        <property type="entry name" value="HEQRo_perm_3TM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0029">Amino-acid transport</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="8" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="25"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="65"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="101"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="136"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="209"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="243"/>
            <end position="262"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="9">
        <location>
            <begin position="65"/>
            <end position="262"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ68938.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="275" mass="31182" checksum="DD184F60E345BE57" modified="2015-12-09" version="1">MIAANPSTGMTRPPPPQKKWTNLRIAGHVLMALWILSGLYLLYFLGSNVASPFFQKYWPEYVDGFIVTIQIVSVSLVLGALLSVPIAAGRASKLKIFSWPAYAYVNFFRGTPLLAQAFMVYYGFGSFSEELKAAGLWWFFRDAWYCVIFTFSLNTAAYQAEILRGAIQNVPKGQWEGGEALGLSRNVIFFKIILPQALMVALRPYGNEIILMIKGSAIASIVTIYDLMGETRRAYSRSYDFQAYIWAAVAYLLIVETLRRIWDKIEARLTRHLKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1Z9</accession>
    <name>A0A0M7A1Z9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Periplasmic serine endoprotease DegP-like</fullName>
            <ecNumber evidence="5">3.4.21.107</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">mucD</name>
        <name evidence="7" type="ORF">LAX5112_01753</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 5">
            <text>Acts on substrates that are at least partially unfolded. The cleavage site P1 residue is normally between a pair of hydrophobic residues, such as Val-|-Val.</text>
            <dbReference type="EC" id="3.4.21.107"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the peptidase S1C family.</text>
    </comment>
    <dbReference type="EC" id="3.4.21.107" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68476.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671483.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01753"/>
    <dbReference type="EnsemblBacteria" id="CTQ68476">
        <property type="protein sequence ID" value="CTQ68476"/>
        <property type="gene ID" value="LAX5112_01753"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004252">
        <property type="term" value="F:serine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.42.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001478">
        <property type="entry name" value="PDZ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036034">
        <property type="entry name" value="PDZ_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011782">
        <property type="entry name" value="Pept_S1C_Do"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009003">
        <property type="entry name" value="Peptidase_S1_PA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001940">
        <property type="entry name" value="Peptidase_S1C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00595">
        <property type="entry name" value="PDZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13180">
        <property type="entry name" value="PDZ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00834">
        <property type="entry name" value="PROTEASES2C"/>
    </dbReference>
    <dbReference type="SMART" id="SM00228">
        <property type="entry name" value="PDZ"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50156">
        <property type="entry name" value="SSF50156"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50494">
        <property type="entry name" value="SSF50494"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02037">
        <property type="entry name" value="degP_htrA_DO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50106">
        <property type="entry name" value="PDZ"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5 7" id="KW-0645">Protease</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <keyword evidence="5" id="KW-0720">Serine protease</keyword>
    <keyword evidence="2 5" id="KW-0732">Signal</keyword>
    <keyword evidence="5" id="KW-0346">Stress response</keyword>
    <feature type="signal peptide" evidence="5">
        <location>
            <begin position="1"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5010603154" description="Periplasmic serine endoprotease DegP-like" evidence="5">
        <location>
            <begin position="33"/>
            <end position="485"/>
        </location>
    </feature>
    <feature type="domain" description="PDZ" evidence="6">
        <location>
            <begin position="289"/>
            <end position="371"/>
        </location>
    </feature>
    <feature type="domain" description="PDZ" evidence="6">
        <location>
            <begin position="402"/>
            <end position="468"/>
        </location>
    </feature>
    <feature type="active site" description="Charge relay system" evidence="4">
        <location>
            <position position="128"/>
        </location>
    </feature>
    <feature type="active site" description="Charge relay system" evidence="4">
        <location>
            <position position="158"/>
        </location>
    </feature>
    <feature type="active site" description="Charge relay system" evidence="4">
        <location>
            <position position="233"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001772"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR611782-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU364067"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50106"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ68476.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="485" mass="51840" checksum="669B130A361987F4" modified="2015-12-09" version="1">MGLLGTRARFGTKAVAAGLLALFWLGSASAQAQQPTPEDLRLVPDSAAQIKLSFAPLVKQVAPAVVNVYASRKVVQRQQVSPFFDDPFFRRFFGQPNGGFGQPRERVESSLGSGVIISADGTVITNHHVIKGADEVRVALNDRREFDADIVLMDEQTDLAVLKIREGGPFEHVEFADADLLEVGDIVLAIGNPFGVGQTVTQGIVSALARTQVGVTDYQFFIQTDAAINPGNSGGALIDMTGKLVGINTAIFSRSGGSNGIGFAIPAHMARYVARAADQGGKVQRPWLGATVQLVGAEIAEALSLDRPKGVLVTAVFDGSPAHEADLRVSDLVVAIDGKEVIDPNAFGYRFATKMIGESAEFTVLRSGREETVSISLQPAPETVPRDTRELLEFSPFEGATVMNLSPAVAQELGLDGLPEGVIIAEVRRGGQADRVGLRPGDIVRGINNQAISSTRMLETITKTPPRIWRLDIERDGKVSQIVLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2G6</accession>
    <name>A0A0M7A2G6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Deoxyribodipyrimidine photo-lyase</fullName>
            <ecNumber evidence="5">4.1.99.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">phr</name>
        <name evidence="5" type="ORF">LAX5112_01837</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <dbReference type="EC" id="4.1.99.3" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68672.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671550.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01837"/>
    <dbReference type="EnsemblBacteria" id="CTQ68672">
        <property type="protein sequence ID" value="CTQ68672"/>
        <property type="gene ID" value="LAX5112_01837"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003904">
        <property type="term" value="F:deoxyribodipyrimidine photo-lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036134">
        <property type="entry name" value="Crypto/Photolyase_FAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005101">
        <property type="entry name" value="Cryptochr/Photolyase_FAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002081">
        <property type="entry name" value="Cryptochrome/DNA_photolyase_1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11455">
        <property type="entry name" value="PTHR11455"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03441">
        <property type="entry name" value="FAD_binding_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48173">
        <property type="entry name" value="SSF48173"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0274">FAD</keyword>
    <keyword evidence="2" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="5" id="KW-0456">Lyase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FAD_binding_7" evidence="4">
        <location>
            <begin position="75"/>
            <end position="202"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF03441"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ68672.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="405" mass="45433" checksum="ABF3CC4BCA7B8C7C" modified="2015-12-09" version="1">MTIFSPTRESALQHLDDFTPQMGRAYAAQRNYDRGPGEHTSVSCLSPYIRRRLISEQEVVTAALQNHGLDGAEKFIQEVFWRGYFKGWLERRPAIWTSYRQGLTADLEDLKTNSGLRQAVARAEAGQTGIDCFDAWASELIDTGYLHNHARMWFASIWIFTLKLPWRVGADFFYRHLLDGDPASNTLSWRWVSGLHTRGKTYEAQAWNIAKFTGGRFAPESSDFETGVKSLDWSEPNGLPSAQPPRDFVAPEPGKPAALLITEDDCLPETLIPGGIELVAAATLTSSDLRSPRPVPDLIRSFEAAALDDAAQRIGQAVLRLNPASPDPIIEWAAKTGAKQILMPYVPTGPLKDWLDAARPELENHGFTLTEIRRPWDDAIWRYATAGFFKVKKEIPNILDRLEII</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2M6</accession>
    <name>A0A0M7A2M6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">3-oxoacyl-[acyl-carrier-protein] reductase FabG</fullName>
            <ecNumber evidence="3">1.1.1.100</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">fabG_7</name>
        <name evidence="3" type="ORF">LAX5112_02064</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the short-chain dehydrogenases/reductases (SDR) family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.100" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69305.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671741.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02064"/>
    <dbReference type="EnsemblBacteria" id="CTQ69305">
        <property type="protein sequence ID" value="CTQ69305"/>
        <property type="gene ID" value="LAX5112_02064"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004316">
        <property type="term" value="F:3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018454">
        <property type="term" value="F:acetoacetyl-CoA reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042619">
        <property type="term" value="P:poly-hydroxybutyrate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011283">
        <property type="entry name" value="Acetoacetyl-CoA_reductase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01829">
        <property type="entry name" value="AcAcCoA_reduct"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006484"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ69305.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="240" mass="25200" checksum="8AA12B4AC22BB8C1" modified="2015-12-09" version="1">MSKVALVTGGTRGIGEAISRGLKEAGYTVAATYAGNTEKAEAFKAETGIHVYKWDVSDPDACAAGIAQVESDLGPVEVLVNNAGITRDGMFHKMDFDQWRAVMSTNLDSMFTMTHPVINGMRSRGSGRIINISSINGQKGQMGQTNYSAAKAGVIGFTKALAQENAFKGITVNCVCPGYIGTDMVAAMPEKVLESIVGGIPVGRLGKPEEIAETVVYLASDKAGFMTGAVMTINGGQYMA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A392</accession>
    <name>A0A0M7A392_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Inner membrane protein YebE</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yebE</name>
        <name evidence="2" type="ORF">LAX5112_02081</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69349.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671753.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02081"/>
    <dbReference type="EnsemblBacteria" id="CTQ69349">
        <property type="protein sequence ID" value="CTQ69349"/>
        <property type="gene ID" value="LAX5112_02081"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd07178">
        <property type="entry name" value="terB_like_YebE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3680.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029024">
        <property type="entry name" value="TerB-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007486">
        <property type="entry name" value="YebE"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04391">
        <property type="entry name" value="DUF533"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF158682">
        <property type="entry name" value="SSF158682"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="13"/>
            <end position="39"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69349.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="248" mass="26141" checksum="A3403FCA1310C801" modified="2015-12-09" version="1">MFDAKSLLDQFLGSQGGGQGGQYPGQNQRGGSGDLLSQGKDFLSSQGGGLALGSLAGLMLGSKSGRKIGKKAVTYGGLALVAGLAYKAYQGHQANKQNAPRPHYPQDEPIPLEAPRGTAFDPAQQPGGENQFAVNLLTAMISAAKADGHIDRDEQDRIFEKIDEAGLDSEAKAFLMDELRSPLDLDKVVASATCPETAAEIYAASRLAIDPDHPAEKAYLQMLAARLGLEEGLVQEIEMAVREAEMAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3I9</accession>
    <name>A0A0M7A3I9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Chemotactic signal-response protein CheL</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01684</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68234.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01684"/>
    <dbReference type="EnsemblBacteria" id="CTQ68234">
        <property type="protein sequence ID" value="CTQ68234"/>
        <property type="gene ID" value="LAX5112_01684"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019301">
        <property type="entry name" value="Flagellar_prot_FlgJ_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10135">
        <property type="entry name" value="Rod-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Rod-binding" evidence="2">
        <location>
            <begin position="46"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF10135"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ68234.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="103" mass="10772" checksum="6660081A5F557874" modified="2015-12-09" version="1">MDLPLAPSMPRSNPLDVLQGVNPSDKSAARAAAEEFEAVFLNNMLQSMFSGLENGGAWGGGTGSDTWQSMLVDEYARTISAAGGVGIADSVERELLALQEGAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3U7</accession>
    <name>A0A0M7A3U7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Spore coat protein SA</fullName>
            <ecNumber evidence="3">2.4.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">cotSA_1</name>
        <name evidence="3" type="ORF">LAX5112_02233</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.4.-.-" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69745.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02233"/>
    <dbReference type="EnsemblBacteria" id="CTQ69745">
        <property type="protein sequence ID" value="CTQ69745"/>
        <property type="gene ID" value="LAX5112_02233"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016757">
        <property type="term" value="F:glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001296">
        <property type="entry name" value="Glyco_trans_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028098">
        <property type="entry name" value="Glyco_trans_4-like_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13439">
        <property type="entry name" value="Glyco_transf_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00534">
        <property type="entry name" value="Glycos_transf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0167">Capsid protein</keyword>
    <keyword evidence="3" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="3" id="KW-0946">Virion</keyword>
    <feature type="domain" description="Glyco_trans_4-like_N" evidence="2">
        <location>
            <begin position="19"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="domain" description="Glycos_transf_1" evidence="1">
        <location>
            <begin position="187"/>
            <end position="352"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00534"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13439"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ69745.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="390" mass="41308" checksum="B4AE393926D9044B" modified="2015-12-09" version="1">MSLPTAPTVLQVIPDLNSGGAERTTVDIARALIAAGGTALVASQGGQMVRELEDIGAQHFTLPVKSKNPITLWKNAGLLSDLIRAQNVDIIHARSRAPAWSALFAARRTHIPFVTTYHGSYSQSNAVKGLYNSIMARGDTVIANSKYIAGLITDRHPFAKDRITVIHRGSDLKGLAPENVSALRRQALKDSWGVPTGRPIIMNMARLTSWKGQKVLIEAMGTLKASGPTAPIAILAGDAQGRDGYVAELKQLIADWNLQDQVRLVGHCADVPAAMALSDLAVVASIEPEAFGRAAVEAQAARVPVIVSDLGAVPETVLAPPDVSEGDRTGWRVPPGDSDALASAIKTALALSAEDRLALTGRGLTHASRNFTVETMCAKTLDVYAELLDS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3U8</accession>
    <name>A0A0M7A3U8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02061</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69297.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671740.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02061"/>
    <dbReference type="EnsemblBacteria" id="CTQ69297">
        <property type="protein sequence ID" value="CTQ69297"/>
        <property type="gene ID" value="LAX5112_02061"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.450.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005624">
        <property type="entry name" value="PduO/GlcC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038084">
        <property type="entry name" value="PduO/GlcC-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03928">
        <property type="entry name" value="Haem_degrading"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF143744">
        <property type="entry name" value="SSF143744"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ69297.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="143" mass="14356" checksum="18333E5C3D4CE85E" modified="2015-12-09" version="1">MRKLTLSTAETIISAALEKAEELSLKPLTVVVLDAGGHAIALKRQDGSSIMRPQIATGKAVGALAVGTGTRWLNANAETRPHFVNALNGASGGAIIPVPGGVLVKNEEGETLGAVGITGDTSDNDEACAVAGVEAVNLVADCG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A403</accession>
    <name>A0A0M7A403_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glycerophosphoryl diester phosphodiesterase</fullName>
            <ecNumber evidence="2">3.1.4.46</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ugpQ</name>
        <name evidence="2" type="ORF">LAX5112_01984</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.4.46" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ69040.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671657.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01984"/>
    <dbReference type="EnsemblBacteria" id="CTQ69040">
        <property type="protein sequence ID" value="CTQ69040"/>
        <property type="gene ID" value="LAX5112_01984"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008889">
        <property type="term" value="F:glycerophosphodiester phosphodiesterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006629">
        <property type="term" value="P:lipid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.190">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030395">
        <property type="entry name" value="GP_PDE_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017946">
        <property type="entry name" value="PLC-like_Pdiesterase_TIM-brl"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03009">
        <property type="entry name" value="GDPD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51695">
        <property type="entry name" value="SSF51695"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51704">
        <property type="entry name" value="GP_PDE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GP-PDE" evidence="1">
        <location>
            <begin position="4"/>
            <end position="232"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51704"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69040.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="240" mass="26555" checksum="75E700D3B60E667D" modified="2015-12-09" version="1">MNRAAIVCHRGLSLKAPENTLASLEKAIEAGAEVVELDVRPSHDGVLYVFHDDTLDRTTNGSGRFADKLSSEIDRLDAGSWFSEEFTGERVPRFDAFLKACRGRIAVYAEIKEGDPAEVRDMLKANGLLETAWTFSFDQAIRAEARARVPDLRLMVLFDHVGSVERAVAQGAAILEFQAHNLDPDLAASARQSGLVTQLFYDGDDRDVFEMAVKCGIQQMNIDHVDVFRSVEDEILIPAT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A432</accession>
    <name>A0A0M7A432_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Efflux pump periplasmic linker BepF</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">bepF_3</name>
        <name evidence="4" type="ORF">LAX5112_02041</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69242.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671726.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02041"/>
    <dbReference type="EnsemblBacteria" id="CTQ69242">
        <property type="protein sequence ID" value="CTQ69242"/>
        <property type="gene ID" value="LAX5112_02041"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032317">
        <property type="entry name" value="HlyD_D23"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006143">
        <property type="entry name" value="RND_pump_MFP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16576">
        <property type="entry name" value="HlyD_D23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01730">
        <property type="entry name" value="RND_mfp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809267" evidence="2">
        <location>
            <begin position="23"/>
            <end position="364"/>
        </location>
    </feature>
    <feature type="domain" description="HlyD_D23" evidence="3">
        <location>
            <begin position="54"/>
            <end position="277"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF16576"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ69242.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="364" mass="38790" checksum="1976D4CB0E26DEA8" modified="2015-12-09" version="1">MKFFPSAFVFFISAIGLIPAHADDPAPAVMVERASNTKPGMADVYVGRVAAVSTVKVEARVEGVLESQKFTDGGLVKKGDVLFQIEKDLYQASADKAQATLDGAKATALNGKINLDRQKQLVDRGDVSQAVYDSAEADYKADQAAVGQAQADLDTANINLGFTTITSPIDGRISDSPIDVGNLITSNTGVLATITSIDPIHVKFFISERDLILKRQEGLVSENSSTLDVKLQLSDGASYPASGKIDYISNEVETATDTVEMRAAFANKDALLVPGQVVTVTFEDPNASEVVVVPQTAIQLDAKGHFVFVVGKDNVVERRDVTLGNQIGRDWVVSKGLQAGDPVVIQGLQKIHEGVKVSPTETQS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A496</accession>
    <name>A0A0M7A496_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 5 6">50S ribosomal protein L19</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 8" type="primary">rplS</name>
        <name evidence="8" type="ORF">LAX5112_02046</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5 6">This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 5 6">Belongs to the bacterial ribosomal protein bL19 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69256.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008194724.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02046"/>
    <dbReference type="EnsemblBacteria" id="CTQ69256">
        <property type="protein sequence ID" value="CTQ69256"/>
        <property type="gene ID" value="LAX5112_02046"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.790">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00402">
        <property type="entry name" value="Ribosomal_L19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038657">
        <property type="entry name" value="L19_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001857">
        <property type="entry name" value="Ribosomal_L19"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018257">
        <property type="entry name" value="Ribosomal_L19_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008991">
        <property type="entry name" value="Translation_prot_SH3-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15680">
        <property type="entry name" value="PTHR15680"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01245">
        <property type="entry name" value="Ribosomal_L19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002191">
        <property type="entry name" value="Ribosomal_L19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00061">
        <property type="entry name" value="RIBOSOMALL19"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50104">
        <property type="entry name" value="SSF50104"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01024">
        <property type="entry name" value="rplS_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01015">
        <property type="entry name" value="RIBOSOMAL_L19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5 6" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3 5 8" id="KW-0689">Ribosomal protein</keyword>
    <feature type="coiled-coil region" evidence="7">
        <location>
            <begin position="126"/>
            <end position="158"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005781"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00021191"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00402"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU000559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ69256.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="158" mass="17345" checksum="084CD3AE641FD4FB" modified="2015-12-09" version="1">MNIIEQLNAEEMAKIEAQRKLPEFSPGDTVRVLVKVTEGSRTRTQAYEGVCIARSGGGINESFTVRKISYGEGVERVFPIYSPMLEGVEVVRRGKVRRAKLYYLRDRRGKSARITENTNARSKRLNEGARAEAAAVKAAKAEAKKAEAEAAAAETAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5A4</accession>
    <name>A0A0M7A5A4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Anthranilate synthase</fullName>
            <ecNumber evidence="1">4.1.3.27</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">trpE</name>
        <name evidence="6" type="ORF">LAX5112_01893</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>chorismate + L-glutamine = anthranilate + H(+) + L-glutamate + pyruvate</text>
            <dbReference type="Rhea" id="RHEA:21732"/>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16567"/>
            <dbReference type="ChEBI" id="CHEBI:29748"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="EC" id="4.1.3.27"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1">Amino-acid biosynthesis; L-tryptophan biosynthesis; L-tryptophan from chorismate: step 1/5.</text>
    </comment>
    <dbReference type="EC" id="4.1.3.27" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68804.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671589.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01893"/>
    <dbReference type="EnsemblBacteria" id="CTQ68804">
        <property type="protein sequence ID" value="CTQ68804"/>
        <property type="gene ID" value="LAX5112_01893"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00035">
        <property type="reaction ID" value="UER00040"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004049">
        <property type="term" value="F:anthranilate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006541">
        <property type="term" value="P:glutamine metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000162">
        <property type="term" value="P:tryptophan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01743">
        <property type="entry name" value="GATase1_Anthranilate_Synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005801">
        <property type="entry name" value="ADC_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019999">
        <property type="entry name" value="Anth_synth_I-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006805">
        <property type="entry name" value="Anth_synth_I_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015890">
        <property type="entry name" value="Chorismate_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017926">
        <property type="entry name" value="GATASE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010112">
        <property type="entry name" value="TrpE-G_bact"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006221">
        <property type="entry name" value="TrpG/PapA_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11236">
        <property type="entry name" value="PTHR11236"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04715">
        <property type="entry name" value="Anth_synt_I_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00425">
        <property type="entry name" value="Chorismate_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00117">
        <property type="entry name" value="GATase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF036934">
        <property type="entry name" value="TrpE-G"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="SSF52317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56322">
        <property type="entry name" value="SSF56322"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01815">
        <property type="entry name" value="TrpE-clade3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00566">
        <property type="entry name" value="trpG_papA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="1" id="KW-0057">Aromatic amino acid biosynthesis</keyword>
    <keyword evidence="1 6" id="KW-0456">Lyase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0822">Tryptophan biosynthesis</keyword>
    <feature type="domain" description="Anth_synt_I_N" evidence="5">
        <location>
            <begin position="39"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="domain" description="Chorismate_bind" evidence="4">
        <location>
            <begin position="242"/>
            <end position="495"/>
        </location>
    </feature>
    <feature type="domain" description="GATase" evidence="3">
        <location>
            <begin position="529"/>
            <end position="701"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="218"/>
            <end position="241"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRNR" id="PIRNR036934"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00425"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF04715"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ68804.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="726" mass="80759" checksum="E135B6B142A1EE1F" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5C7</accession>
    <name>A0A0M7A5C7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 7">6,7-dimethyl-8-ribityllumazine synthase</fullName>
            <shortName evidence="7">DMRL synthase</shortName>
            <shortName evidence="7">LS</shortName>
            <shortName evidence="7">Lumazine synthase</shortName>
            <ecNumber evidence="4 7">2.5.1.78</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">ribH2</name>
        <name evidence="7" type="synonym">ribH</name>
        <name evidence="8" type="ORF">LAX5112_02450</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>(2S)-2-hydroxy-3-oxobutyl phosphate + 5-amino-6-(D-ribitylamino)uracil = 6,7-dimethyl-8-(1-D-ribityl)lumazine + H(+) + 2 H2O + phosphate</text>
            <dbReference type="Rhea" id="RHEA:26152"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15934"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58201"/>
            <dbReference type="ChEBI" id="CHEBI:58830"/>
            <dbReference type="EC" id="2.5.1.78"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 7">Cofactor biosynthesis; riboflavin biosynthesis; riboflavin from 2-hydroxy-3-oxobutyl phosphate and 5-amino-6-(D-ribitylamino)uracil: step 1/2.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 7">Belongs to the DMRL synthase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.78" evidence="4 7"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70288.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672048.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02450"/>
    <dbReference type="EnsemblBacteria" id="CTQ70288">
        <property type="protein sequence ID" value="CTQ70288"/>
        <property type="gene ID" value="LAX5112_02450"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00275">
        <property type="reaction ID" value="UER00404"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009349">
        <property type="term" value="C:riboflavin synthase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000906">
        <property type="term" value="F:6,7-dimethyl-8-ribityllumazine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009231">
        <property type="term" value="P:riboflavin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.960">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00178">
        <property type="entry name" value="Lumazine_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034964">
        <property type="entry name" value="LS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002180">
        <property type="entry name" value="LS/RS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036467">
        <property type="entry name" value="LS/RS_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21058">
        <property type="entry name" value="PTHR21058"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00885">
        <property type="entry name" value="DMRL_synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52121">
        <property type="entry name" value="SSF52121"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 7" id="KW-0686">Riboflavin biosynthesis</keyword>
    <keyword evidence="6 7 8" id="KW-0808">Transferase</keyword>
    <feature type="region of interest" description="5-amino-6-(D-ribitylamino)uracil binding" evidence="7">
        <location>
            <begin position="44"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="region of interest" description="5-amino-6-(D-ribitylamino)uracil binding" evidence="7">
        <location>
            <begin position="68"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="7">
        <location>
            <position position="76"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="15"/>
        </location>
        <ligand>
            <name>5-amino-6-(D-ribitylamino)uracil</name>
            <dbReference type="ChEBI" id="CHEBI:15934"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="101"/>
        </location>
        <ligand>
            <name>5-amino-6-(D-ribitylamino)uracil</name>
            <dbReference type="ChEBI" id="CHEBI:15934"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="115"/>
        </location>
        <ligand>
            <name>(2S)-2-hydroxy-3-oxobutyl phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58830"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001697"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007424"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022619"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00178"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ70288.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="146" mass="15671" checksum="408F02E0E0C98806" modified="2015-12-09" version="1">MTAAPTRYAFIKANWHADIVDRALDGFCEVIPADQVDVFTVPGAFEMPLLARDLANSGKYAAVAAAALVVDGGIYRHDFVAQAVVSGLMQAGLDSNVPVLSVSLTPHHFQPTDHHIGIYKDHFVEKGREAAQAALMIGKTRESLKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5J9</accession>
    <name>A0A0M7A5J9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Glyoxalase_8 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02480</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70358.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70358">
        <property type="protein sequence ID" value="CTQ70358"/>
        <property type="gene ID" value="LAX5112_02480"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045517">
        <property type="entry name" value="Glyoxalase_8"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20066">
        <property type="entry name" value="Glyoxalase_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glyoxalase_8" evidence="1">
        <location>
            <begin position="2"/>
            <end position="141"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF20066"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70358.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="144" mass="15952" checksum="132D97148C11F745" modified="2015-12-09" version="1">MTLPNLTDLKSQAKRLRLAISNSDSADVSHSKSLELVAKQYGYRDWNTLHAATQNNGFRPFTVGDRVNGTYLGQSFEGEIRGFAKTSQSGTYRVTIQFDAPVDVVTFDSFSAYRSRVTCTIRENGIAINRTSDGRPHLVMDLAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5W2</accession>
    <name>A0A0M7A5W2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02523</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70478.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008196998.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02523"/>
    <dbReference type="EnsemblBacteria" id="CTQ70478">
        <property type="protein sequence ID" value="CTQ70478"/>
        <property type="gene ID" value="LAX5112_02523"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="21"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="46"/>
            <end position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70478.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="77" mass="8775" checksum="85B3155F41D91793" modified="2015-12-09" version="1">MAKKKGKFVFGGFEHPWLDPLWRRILIVGFCAVWTGVEYYNDNQTWAIIVGAITAYAFYGYLIAYKGATPKPPEDRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6N0</accession>
    <name>A0A0M7A6N0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Inositol-1-monophosphatase</fullName>
            <ecNumber evidence="1">3.1.3.25</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">suhB_2</name>
        <name evidence="1" type="ORF">LAX5112_02345</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.3.25" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70076.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02345"/>
    <dbReference type="EnsemblBacteria" id="CTQ70076">
        <property type="protein sequence ID" value="CTQ70076"/>
        <property type="gene ID" value="LAX5112_02345"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008934">
        <property type="term" value="F:inositol monophosphate 1-phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052832">
        <property type="term" value="F:inositol monophosphate 3-phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052833">
        <property type="term" value="F:inositol monophosphate 4-phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046855">
        <property type="term" value="P:inositol phosphate dephosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046854">
        <property type="term" value="P:phosphatidylinositol phosphate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000760">
        <property type="entry name" value="Inositol_monophosphatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020550">
        <property type="entry name" value="Inositol_monophosphatase_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00459">
        <property type="entry name" value="Inositol_P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00377">
        <property type="entry name" value="IMPHPHTASES"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00630">
        <property type="entry name" value="IMP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ70076.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="266" mass="28124" checksum="13754B1112452E72" modified="2015-12-09" version="1">MPGIDAAAFEADLKLLEDAALEAGELALTFFGRDPETWFKGNKSPVSEADIAVDRFLGETLRAARPDYGWLSEETADDPIRLQHDRVFIVDPIDGTRAFLAGGDEWTVSVAVVDKGRPVAGAVYCPRRKEMFLAAKGGGASLNKGEITVSDRTETAGALLTGPYSIAANKDIQAAGFEATDVLRSLAYRLAMVACGRVDVGAARGGPSDWDLAAADLLVQEAGGTLTDLSGEQLLYNRAKTRHPALVAAPVQLSGPVRNVLGKLIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A728</accession>
    <name>A0A0M7A728_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Porin</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">omp2b_2</name>
        <name evidence="5" type="ORF">LAX5112_02331</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cell outer membrane</location>
            <topology evidence="4">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="domain">
        <text evidence="4">Consists of 16-stranded beta-barrel sheets, with large surface-exposed loops, that form a transmembrane pore at the center of each barrel. The pore is partially ocluded by a peptide loop that folds into the pore lumen.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the alphaproteobacteria porin family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70040.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671957.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02331"/>
    <dbReference type="EnsemblBacteria" id="CTQ70040">
        <property type="protein sequence ID" value="CTQ70040"/>
        <property type="gene ID" value="LAX5112_02331"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009279">
        <property type="term" value="C:cell outer membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046930">
        <property type="term" value="C:pore complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015288">
        <property type="term" value="F:porin activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006811">
        <property type="term" value="P:ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003684">
        <property type="entry name" value="Porin_alphabac"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02530">
        <property type="entry name" value="Porin_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0998">Cell outer membrane</keyword>
    <keyword evidence="4" id="KW-0406">Ion transport</keyword>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-0626">Porin</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0732">Signal</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1134">Transmembrane beta strand</keyword>
    <keyword evidence="2 4" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5009360947" description="Porin" evidence="4">
        <location>
            <begin position="21"/>
            <end position="387"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009521"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU364005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ70040.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="387" mass="42233" checksum="0198441013C3F014" modified="2015-12-09" version="1">MIRSALIGASFGLLSIPALAADLPIAPEPIDYLRICDAYGNRFFYLPGTETCLRVGGRVRIEYRLNNYGSGPNNWSDKAATGTTFRARGYSYLDSRTATEYGLLRTYNSVYVTNDNDSSSNSLELEYSFIQFGGFTFGRAQSFWDFWTGYSFGARVTSYSDTKSNVVAYTRAFGNGVSASLSIESPVSRRVELISPNANGYGGFKIPDAVANIRIDQAWGSAQIMGALHQVYFVDTASKSALGWAVGAGAEIKVPFLGGRDKVVLQVGYSDGASRFPLDSWNGRITDAINVGGSTKTTKTWNIAGGWRHAVTDTVTANLEGGYHTVDAALDSYDFNQWTVTGNVVWSPISGVDIGAEMQYRNVDFDRASGLSDTDEIYTTLRVQRTF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7E5</accession>
    <name>A0A0M7A7E5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">HTH-type transcriptional regulator MhqR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">mhqR_4</name>
        <name evidence="2" type="ORF">LAX5112_02386</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70160.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672003.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70160">
        <property type="protein sequence ID" value="CTQ70160"/>
        <property type="gene ID" value="LAX5112_02386"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000835">
        <property type="entry name" value="HTH_MarR-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12802">
        <property type="entry name" value="MarR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00347">
        <property type="entry name" value="HTH_MARR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50995">
        <property type="entry name" value="HTH_MARR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH marR-type" evidence="1">
        <location>
            <begin position="12"/>
            <end position="144"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70160.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="160" mass="18038" checksum="17F364297885C4E0" modified="2015-12-09" version="1">MIKARHQNSDELYEVIRLIRPVHRRLARAVEAKLDGTGVSVGMRAVMEVLEEVGALSVPEIGRTLFLARQQIQLMVNELEQLGLLERRPNPAHKRSPLFALTGRGQDVFGEIRSKENDEIDAVSAHFSKEEVQAAQRLLCAMLDHFAEFEDDPDSPRGLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8G4</accession>
    <name>A0A0M7A8G4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Glutathione import ATP-binding protein GsiA</fullName>
            <ecNumber evidence="8">3.6.3.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">gsiA_3</name>
        <name evidence="8" type="ORF">LAX5112_02821</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.-" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71435.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672354.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02821"/>
    <dbReference type="EnsemblBacteria" id="CTQ71435">
        <property type="protein sequence ID" value="CTQ71435"/>
        <property type="gene ID" value="LAX5112_02821"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015833">
        <property type="term" value="P:peptide transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013563">
        <property type="entry name" value="Oligopep_ABC_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08352">
        <property type="entry name" value="oligo_HPY"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ABC transporter" evidence="7">
        <location>
            <begin position="9"/>
            <end position="258"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="7">
        <location>
            <begin position="288"/>
            <end position="527"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="43"/>
            <end position="50"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="320"/>
            <end position="327"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ71435.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="543" mass="59769" checksum="0BD775EBAABF79B8" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A946</accession>
    <name>A0A0M7A946_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">TMAO reductase sytem sensor TorS</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02730</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71137.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02730"/>
    <dbReference type="EnsemblBacteria" id="CTQ71137">
        <property type="protein sequence ID" value="CTQ71137"/>
        <property type="gene ID" value="LAX5112_02730"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.160">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036641">
        <property type="entry name" value="HPT_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008207">
        <property type="entry name" value="Sig_transdc_His_kin_Hpt_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01627">
        <property type="entry name" value="Hpt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47226">
        <property type="entry name" value="SSF47226"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50894">
        <property type="entry name" value="HPT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HPt" evidence="2">
        <location>
            <begin position="27"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="modified residue" description="Phosphohistidine" evidence="1">
        <location>
            <position position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50894"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ71137.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="120" mass="12601" checksum="BD8BBA7EDD66FE39" modified="2015-12-09" version="1">MAPSSMARVSGRASPEAPIDLVQLATNTLGNRDLEVQVLHLFKSQSRMTLERLENETDPSVRADLVHTLKGSARAIGAARVATACECLEGDLKAAPNAPTTGLVAAVTEANGYICDLLEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A958</accession>
    <name>A0A0M7A958_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Inosine-guanosine kinase</fullName>
            <ecNumber evidence="2">2.7.1.73</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">gsk</name>
        <name evidence="2" type="ORF">LAX5112_02812</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.7.1.73" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71409.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672351.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02812"/>
    <dbReference type="EnsemblBacteria" id="CTQ71409">
        <property type="protein sequence ID" value="CTQ71409"/>
        <property type="gene ID" value="LAX5112_02812"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0106366">
        <property type="term" value="F:guanosine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008906">
        <property type="term" value="F:inosine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1190.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011611">
        <property type="entry name" value="PfkB_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029056">
        <property type="entry name" value="Ribokinase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00294">
        <property type="entry name" value="PfkB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53613">
        <property type="entry name" value="SSF53613"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PfkB" evidence="1">
        <location>
            <begin position="38"/>
            <end position="318"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71409.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="333" mass="35848" checksum="A7443314767D2376" modified="2015-12-09" version="1">MTEIRFDALCIGNAICDVFAHVEEDFLLQEGLVKGSMRLIETDEAVALFNKMGQTVRISGGSAGNTAAGIASLGGRPAYFGKVAEDELGDSYYHDMNGTGVYYNTPRLREWKPTARSMILITPDGERTMNTYLGACTEFSPSDVDEDVVAAAAVTYMEGYLWDPEEAKKAFLAAAEIAHKHDRKVAITLSDSFCVDRYRDEFTGLLSDGVVDLIFANEHEIKALYQTGDLDTAISAARESGAMTALTLGKDGAMIITPEETVKVPAQQVDNVVDLTGAGDLFAAGFLFGLARDYSLTNAAELGCICASSVIKHVGARPERPLKNLAAQNGFEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9H5</accession>
    <name>A0A0M7A9H5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02851</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71519.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672432.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ71519">
        <property type="protein sequence ID" value="CTQ71519"/>
        <property type="gene ID" value="LAX5112_02851"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="72"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="108"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="142"/>
            <end position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71519.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="170" mass="18187" checksum="2FBAE7730DB802A2" modified="2015-12-09" version="1">MTTLTADRHLTAAAPAVSVSTIGLMFISGFFATIAFDLWGQVISPGLGFANLSPHGLAQSLLASLGLPSNAFAGYFVHFYLVGLVGYPIGWMYVFAPIWQRVVGDTHWLLPAAIYGVGLWVFAIGGITAIAGLPFFLNFTGITWVALVGHVLYAVVMVGVLDLIERQKQT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9U4</accession>
    <name>A0A0M7A9U4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02532</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70503.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672105.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02532"/>
    <dbReference type="EnsemblBacteria" id="CTQ70503">
        <property type="protein sequence ID" value="CTQ70503"/>
        <property type="gene ID" value="LAX5112_02532"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010865">
        <property type="entry name" value="DUF1499"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07386">
        <property type="entry name" value="DUF1499"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="43"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="80"/>
            <end position="102"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70503.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="328" mass="35887" checksum="415F93AAFE92AF94" modified="2015-12-09" version="1">MKQYPAYRSKAAPASRTLGALALALALVTLVTQRFDLLTPDTFVLSLSVAAVLAVTAMLCGLIAFVRIWSRGGGGIGSSILGVMLGAVALCAPAAVLGLLIVDPELTDVTTDPDEPPLLVEALPHSDQAVLVWMASHVRNTTWIQYQEAMRAERSAAELQLELYPDIVPRRYRITPGELHAAAKKAVDELNWRVVDELPPDLLDAPTALWAEETTQLLGLKHDIALRVRPDPVGALLDVRSRSQSPLREFSGNANVIRGLMSEIDRVLLETYGDLERLAVEESELQEDAPLEVFERDRETIPLPSFKPYFEDDEGLSADAFDLDDLEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAD2</accession>
    <name>A0A0M7AAD2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Homoserine/homoserine lactone efflux protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">rhtB_5</name>
        <name evidence="6" type="ORF">LAX5112_02871</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71577.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672389.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02871"/>
    <dbReference type="EnsemblBacteria" id="CTQ71577">
        <property type="protein sequence ID" value="CTQ71577"/>
        <property type="gene ID" value="LAX5112_02871"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006865">
        <property type="term" value="P:amino acid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001123">
        <property type="entry name" value="LeuE-type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30086">
        <property type="entry name" value="PTHR30086"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01810">
        <property type="entry name" value="LysE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006324">
        <property type="entry name" value="LeuE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="6"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="35"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="65"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="105"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="150"/>
            <end position="171"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ71577.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="204" mass="21653" checksum="C1DE3263396B86EC" modified="2015-12-09" version="1">MSLEFLITALIVVLVPGTGVVYTVAVGLGKGRQAAIAAAFGCTLGIIPAILASVIGLAALMHTSALVFTAVKYAGVAYLLYLAWQTLKDSGPLELKADKSNRKSMLATVRTGFLINILNPKLTVFFLAFLPQFVSPLAANPTLDMALLGGVFMAMTFAVFIVYGMFAALVGEKVLRSDMVMLWMRRAVATAFAGFGLRLALAEQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAV2</accession>
    <name>A0A0M7AAV2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Chemotaxis protein PomA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">pomA</name>
        <name evidence="11" type="ORF">LAX5112_03112</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the MotA family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72248.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008189559.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03112"/>
    <dbReference type="EnsemblBacteria" id="CTQ72248">
        <property type="protein sequence ID" value="CTQ72248"/>
        <property type="gene ID" value="LAX5112_03112"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0097588">
        <property type="term" value="P:archaeal or bacterial-type flagellum-dependent cell motility"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000540">
        <property type="entry name" value="Flag_MotA_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002898">
        <property type="entry name" value="MotA_ExbB_proton_chnl"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01618">
        <property type="entry name" value="MotA_ExbB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01307">
        <property type="entry name" value="MOTA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6" id="KW-0283">Flagellar rotation</keyword>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="7"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="32"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="146"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="180"/>
            <end position="199"/>
        </location>
    </feature>
    <feature type="domain" description="MotA_ExbB" evidence="10">
        <location>
            <begin position="101"/>
            <end position="210"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008038"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022779"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF01618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ72248.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="255" mass="26918" checksum="47A2A629E49A51DE" modified="2015-12-09" version="1">MDLATLLGIVGAFAIVITAIFLGGSFGQFVDVPSMLIVIGGGLAATLIRFQVSDIAAAFATAFKVALSGKSASPRDLISEITNLGEIVRKSGPLGLENVDVSDPVLAKGVQYIADGYELEFIKEAMERERDLQLSRLSEGKRVMKALGDSAPAFGMIGTLVGLVQMLANMDDPAAIGPSMAVALLTTLYGALISNILCLPMVDKLDAKFDVDELNQTLIIDGVCQIRESKSPALIKEMLVAYLPEKARADLAEAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AB71</accession>
    <name>A0A0M7AB71_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative photosynthetic complex assembly protein 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02956</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71871.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672468.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02956"/>
    <dbReference type="EnsemblBacteria" id="CTQ71871">
        <property type="protein sequence ID" value="CTQ71871"/>
        <property type="gene ID" value="LAX5112_02956"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017496">
        <property type="entry name" value="Photo_alph_chp2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12291">
        <property type="entry name" value="DUF3623"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03055">
        <property type="entry name" value="photo_alph_chp2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="7"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="38"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="64"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="128"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="191"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="223"/>
            <end position="243"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="257"/>
            <end position="283"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ71871.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="283" mass="30702" checksum="6819DD62BABE0EEA" modified="2015-12-09" version="1">MWLANPVIAVLIATGVWWLSTGLVLLMVHWSIRKKLGPWQLLPLVTLVGVAGFLLLLKGSEMQTPLGSYAGFFGALLVWAWHETTFLTGMVTGRSKQECPPDAKGAARFVAAWKAVCDHEIALLVTAVFLWFVLADAPNTFGLATFGLLWGMRISAKLLIFLGARHAISGLMPPGIVHLKTYFNTGRTTPFFPLLLAIAVGLFAVLVTGAMNAHSAYSSVGHILLAAFMALAIIEHLILVLPVSDMALWRWAVPKGTREKRSNPPAHEFAPAGVGVKRGMETR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="32" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABL6</accession>
    <name>A0A0M7ABL6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">RNA polymerase sigma factor RpoH</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">RNA polymerase sigma-32 factor</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9" type="primary">rpoH_2</name>
        <name evidence="6" type="synonym">rpoH</name>
        <name evidence="9" type="ORF">LAX5112_03212</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Interacts with the RNA polymerase core enzyme.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the sigma-70 factor family. RpoH subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72525.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451015.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03212"/>
    <dbReference type="EnsemblBacteria" id="CTQ72525">
        <property type="protein sequence ID" value="CTQ72525"/>
        <property type="gene ID" value="LAX5112_03212"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016987">
        <property type="term" value="F:sigma factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006352">
        <property type="term" value="P:DNA-templated transcription, initiation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009408">
        <property type="term" value="P:response to heat"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00961">
        <property type="entry name" value="Sigma70_RpoH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014284">
        <property type="entry name" value="RNA_pol_sigma-70_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000943">
        <property type="entry name" value="RNA_pol_sigma70"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009042">
        <property type="entry name" value="RNA_pol_sigma70_r1_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007627">
        <property type="entry name" value="RNA_pol_sigma70_r2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007630">
        <property type="entry name" value="RNA_pol_sigma70_r4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013325">
        <property type="entry name" value="RNA_pol_sigma_r2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013324">
        <property type="entry name" value="RNA_pol_sigma_r3/r4-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012759">
        <property type="entry name" value="RNA_pol_sigma_RpoH_proteobac"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00140">
        <property type="entry name" value="Sigma70_r1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04542">
        <property type="entry name" value="Sigma70_r2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04545">
        <property type="entry name" value="Sigma70_r4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000770">
        <property type="entry name" value="RNA_pol_sigma-SigE/K"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00046">
        <property type="entry name" value="SIGMA70FCT"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88659">
        <property type="entry name" value="SSF88659"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88946">
        <property type="entry name" value="SSF88946"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02392">
        <property type="entry name" value="rpoH_proteo"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02937">
        <property type="entry name" value="sigma70-ECF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00715">
        <property type="entry name" value="SIGMA70_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00716">
        <property type="entry name" value="SIGMA70_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0731">Sigma factor</keyword>
    <keyword evidence="2 6" id="KW-0346">Stress response</keyword>
    <keyword evidence="5 6" id="KW-0804">Transcription</keyword>
    <keyword evidence="1 6" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="RNA_pol_sigma70" evidence="7">
        <location>
            <begin position="76"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="domain" description="RNA_pol_sigma70" evidence="8">
        <location>
            <begin position="252"/>
            <end position="278"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="6">
        <location>
            <begin position="253"/>
            <end position="272"/>
        </location>
    </feature>
    <feature type="region of interest" description="Sigma-70 factor domain-2" evidence="6">
        <location>
            <begin position="52"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="Interaction with polymerase core subunit RpoC" evidence="6">
        <location>
            <begin position="76"/>
            <end position="79"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023082"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS00715"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS00716"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ72525.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="295" mass="33782" checksum="9F56B0DB773DD037" modified="2015-12-09" version="1">MAQNLPTLTAGEGGLSRYLDEIRKFPMLQPQEEYMLAKRYKEHEDPEAAERLVNSHLRLVAKIAMGYRGYGLPIGEVVSEGNVGLMQAVKRFEPDKGFRLATYAMWWIKAAIQEYILRSWSLVKMGTTANQKRLFFNLRRLKGKIQALEEGDLKPHQVQEIATRLGVSEEEVVSMNRRLGGDASLNAPIRAEADAGEWQDWLVDESDSQETLLANQEELDMRRKMLSDAMDVLNDRERRIFEARRLSEDPMTLEDLSGEFGVSRERVRQIEVRAFEKVQKAVRNSARTLDQQPAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACX7</accession>
    <name>A0A0M7ACX7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Tyrosine recombinase XerC</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9 13" type="primary">xerC</name>
        <name evidence="13" type="ORF">LAX5112_02876</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC-XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.</text>
    </comment>
    <comment type="subunit">
        <text evidence="9">Forms a cyclic heterotetrameric complex composed of two molecules of XerC and two molecules of XerD.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the 'phage' integrase family. XerC subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71593.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672393.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02876"/>
    <dbReference type="EnsemblBacteria" id="CTQ71593">
        <property type="protein sequence ID" value="CTQ71593"/>
        <property type="gene ID" value="LAX5112_02876"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009037">
        <property type="term" value="F:tyrosine-based site-specific recombinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007049">
        <property type="term" value="P:cell cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007059">
        <property type="term" value="P:chromosome segregation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.130">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.443.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01808">
        <property type="entry name" value="Recomb_XerC_XerD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044068">
        <property type="entry name" value="CB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011010">
        <property type="entry name" value="DNA_brk_join_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013762">
        <property type="entry name" value="Integrase-like_cat_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002104">
        <property type="entry name" value="Integrase_catalytic"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010998">
        <property type="entry name" value="Integrase_recombinase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004107">
        <property type="entry name" value="Integrase_SAM-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023009">
        <property type="entry name" value="Tyrosine_recombinase_XerC/XerD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02899">
        <property type="entry name" value="Phage_int_SAM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00589">
        <property type="entry name" value="Phage_integrase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56349">
        <property type="entry name" value="SSF56349"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51900">
        <property type="entry name" value="CB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51898">
        <property type="entry name" value="TYR_RECOMBINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 9" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="3 9" id="KW-0132">Cell division</keyword>
    <keyword evidence="4 9" id="KW-0159">Chromosome partition</keyword>
    <keyword evidence="2 9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 9" id="KW-0229">DNA integration</keyword>
    <keyword evidence="7 9" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="6 9 10" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Core-binding (CB)" evidence="12">
        <location>
            <begin position="15"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="domain" description="Tyr recombinase" evidence="11">
        <location>
            <begin position="127"/>
            <end position="311"/>
        </location>
    </feature>
    <feature type="active site" evidence="9">
        <location>
            <position position="170"/>
        </location>
    </feature>
    <feature type="active site" evidence="9">
        <location>
            <position position="195"/>
        </location>
    </feature>
    <feature type="active site" evidence="9">
        <location>
            <position position="263"/>
        </location>
    </feature>
    <feature type="active site" evidence="9">
        <location>
            <position position="266"/>
        </location>
    </feature>
    <feature type="active site" evidence="9">
        <location>
            <position position="289"/>
        </location>
    </feature>
    <feature type="active site" description="O-(3'-phospho-DNA)-tyrosine intermediate" evidence="9">
        <location>
            <position position="298"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022908"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01248"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS51898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS51900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="CTQ71593.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="317" mass="34665" checksum="EFCDF263BF9BE66E" modified="2015-12-09" version="1">MSHNATDSLLVTAKPDLNDRIAKWLDHLSDERRLSDKTLIAYERDLRQFLRFLTDHLGGAPGIKDIADLRPADFRGFLAQRRRNKVQSRSLARGLAGIRSFLKFLERRGEINAAASDAVRPPRQSRSLPKPVSAKDAIDITSGDLAMETEAWVEARNAAVLTLLYGCGLRISEALSLTGKMAPQPGTKTMRIIGKGRKERIVPILPAVCEAVAHYVKLCPYAISPDGPLFLGARGGPLNPRMIQLSMAKLRGALGLPETATPHALRHSFATHLLAGGGDLRTIQELLGHASLASTQIYTEIDSAHLLAAYDKAHPRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADI4</accession>
    <name>A0A0M7ADI4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03268</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72681.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72681">
        <property type="protein sequence ID" value="CTQ72681"/>
        <property type="gene ID" value="LAX5112_03268"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ72681.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="55" mass="6302" checksum="A644F16B418B03FE" modified="2015-12-09" version="1">MLRVKAVEEVLDLPAFLCDLIHIPNLHDQLMRREVNTRSLVFARCANGKLNKQTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="32" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADQ6</accession>
    <name>A0A0M7ADQ6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6 13">5-aminolevulinate synthase</fullName>
            <ecNumber evidence="6 13">2.3.1.37</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9 13">5-aminolevulinic acid synthase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="10 13">Delta-ALA synthase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="11 13">Delta-aminolevulinate synthase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="15" type="primary">hemA_2</name>
        <name evidence="15" type="ORF">LAX5112_02957</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 13">
            <text>glycine + H(+) + succinyl-CoA = 5-aminolevulinate + CO2 + CoA</text>
            <dbReference type="Rhea" id="RHEA:12921"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57292"/>
            <dbReference type="ChEBI" id="CHEBI:57305"/>
            <dbReference type="ChEBI" id="CHEBI:356416"/>
            <dbReference type="EC" id="2.3.1.37"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 12">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="3 13">Porphyrin-containing compound metabolism; protoporphyrin-IX biosynthesis; 5-aminolevulinate from glycine: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4 12">Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.37" evidence="6 13"/>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71873.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672469.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02957"/>
    <dbReference type="EnsemblBacteria" id="CTQ71873">
        <property type="protein sequence ID" value="CTQ71873"/>
        <property type="gene ID" value="LAX5112_02957"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00251">
        <property type="reaction ID" value="UER00375"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003870">
        <property type="term" value="F:5-aminolevulinate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006782">
        <property type="term" value="P:protoporphyrinogen IX biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010961">
        <property type="entry name" value="4pyrrol_synth_NH2levulA_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001917">
        <property type="entry name" value="Aminotrans_II_pyridoxalP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004839">
        <property type="entry name" value="Aminotransferase_I/II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00155">
        <property type="entry name" value="Aminotran_1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01821">
        <property type="entry name" value="5aminolev_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00599">
        <property type="entry name" value="AA_TRANSFER_CLASS_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 13 15" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="7 13" id="KW-0350">Heme biosynthesis</keyword>
    <keyword evidence="12" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="13 15" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Aminotran_1_2" evidence="14">
        <location>
            <begin position="47"/>
            <end position="389"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001588"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005029"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00008392"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00013257"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023133"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00031691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00031945"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00032773"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU003693"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU910713"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF00155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="CTQ71873.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="405" mass="43966" checksum="F7ED96E58275022D" modified="2015-12-09" version="1">MDILKTMETALSELHEAGNYRVFAELERHCNDFPKATFYDDAGETRDVTVWCSNDYLGMGQNPVVTGRMTEIIQRCGAGAGGTRNISGTNHYHVMLERELADLHDKEAALIFTSGYVSNWAALGTLLSKIPGIIVYSDALNHASMIEGIRHSRCTKRLFRHNDPEHLAELMAADDPNAPKLVAFESVYSMDGDIAPIEAICDVADRFGAITYLDEVHAVGMYGPRGGGVAEREGLMDRLTVIEGTLGKAFGVMGGYITGPEVLVDFVRSFASGFIFTTALPPALAAGATASIRYLKESSAERDAHKANVAKVRAALNARGIPHMENPSHIVPVMVGNASKCKWISDVLMTDFGIYVQPINYPTVPVGTERLRITPTPLHTEADIRHLSGALCSLWSQCALARAVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AE69</accession>
    <name>A0A0M7AE69_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">L-aminopeptidase/D-esterase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03523</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase S58 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73378.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ73378">
        <property type="protein sequence ID" value="CTQ73378"/>
        <property type="gene ID" value="LAX5112_03523"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004177">
        <property type="term" value="F:aminopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016117">
        <property type="entry name" value="ArgJ-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005321">
        <property type="entry name" value="Peptidase_S58_DmpA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36512">
        <property type="entry name" value="PTHR36512"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03576">
        <property type="entry name" value="Peptidase_S58"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56266">
        <property type="entry name" value="SSF56266"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0031">Aminopeptidase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0645">Protease</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007068"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73378.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="346" mass="36610" checksum="B89CCBFB21279EBF" modified="2015-12-09" version="1">MRPTNVSPARAHGLICGAMQPGPRNLITDVAGITVGHKTVIDGDLRTGFTAIVPHPGNLFLDKLVASSDVINGFGKSAGLIQVEELGTLETPILLTNTFGVAEGIHALIRRELRQNPQIDRAKGTVNPVVMECNDGYLSDINAIALTEEDANAALMAGSEDFEQGSVGAGAGVSCFGFKGGIGSASRQFELEDRTFTLGALVQANFGRAGDLVLPDGRRPSPEGMAAPEERGSVIIVLATDVPLESRQLKRIARRAGAGLARLGSFYGNGSGDIGFAFSTAHKIPHNSERDLIARDYMHEGNIDLLFQAAAETTQEAVLNAMIASPAMYGKGTSFRPSLKDWLDQN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AE98</accession>
    <name>A0A0M7AE98_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Septal ring factor</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">envC_1</name>
        <name evidence="3" type="ORF">LAX5112_03534</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73408.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672901.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03534"/>
    <dbReference type="EnsemblBacteria" id="CTQ73408">
        <property type="protein sequence ID" value="CTQ73408"/>
        <property type="gene ID" value="LAX5112_03534"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.70.70.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011055">
        <property type="entry name" value="Dup_hybrid_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016047">
        <property type="entry name" value="Peptidase_M23"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01551">
        <property type="entry name" value="Peptidase_M23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51261">
        <property type="entry name" value="SSF51261"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="39"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_M23" evidence="2">
        <location>
            <begin position="340"/>
            <end position="434"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01551"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ73408.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="449" mass="48811" checksum="7A2F185F2FB4A18E" modified="2015-12-09" version="1">MTQKRPEMTRTYQVPHTEAPHRESLKGDLRTTTYILRPVHLIAGALTCIAASLIVTGAISYQVMRSGVVAEVNAERTEVALQYQDRIARLRAEIERLNSRQLVDRESVEIQVMDVLRRQQDLNQRHTIVADLMARAESVGIYLNTGKPVPAQKPAIDEGRIAAAPKGDRTAMGGENEVISEPVKALGLRDASRKPFDPLSVLQGTDAPTGGTLKKKTEKRAALDALKADISEMGTESTAAVDAITVATESRIEDILGITKPLVPNLNKAVRSSSSIGGPFEPLSQTSFADRLNRANTALDTLKRVKFAALRLPVKRPVRTGTLSSGYGPRMDPFLNRLAMHSGLDFKAPYGARVYSAAPGTVIFAGWKGGYGKMVEIRHANGFVTRYAHLSKIRTSDGSHVVAGDVIGNIGSTGRSTGPHLHYEVRQNDRPTNPATFLRAGERLAKLTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEE4</accession>
    <name>A0A0M7AEE4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">LIV-I protein F</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">livF_9</name>
        <name evidence="5" type="ORF">LAX5112_03059</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72113.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672533.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03059"/>
    <dbReference type="EnsemblBacteria" id="CTQ72113">
        <property type="protein sequence ID" value="CTQ72113"/>
        <property type="gene ID" value="LAX5112_03059"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017780">
        <property type="entry name" value="ABC_transptr_urea_ATP-bd_UrtE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43820:SF5">
        <property type="entry name" value="PTHR43820:SF5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03410">
        <property type="entry name" value="urea_trans_UrtE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="2"/>
            <end position="231"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="34"/>
            <end position="41"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ72113.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="231" mass="25345" checksum="49D920629C278F3D" modified="2015-12-09" version="1">MLRVENINLHYGAAQALKGVSLNAETGKVTCLMGRNGVGKTSTLRAVAGQQPISSGQIIWNGEDISNLPPHARAKKGIAIVPQGREVFPLLSVKENLETGYAPIPRKDRFIPDTIFELFPVLKDMLHRRGGDLSGGQQQQLAIARALVTRPKLLVLDEPTEGIQPSIIKDIGRAISWLRDQGTMAIVLVEQYFEFARDLADDYAVMDRGEVVLSGRGADMSEADVRRYLTV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AF72</accession>
    <name>A0A0M7AF72_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">C4-dicarboxylate transport transcriptional regulatory protein DctD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">dctD_3</name>
        <name evidence="3" type="ORF">LAX5112_03129</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72294.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008196017.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03129"/>
    <dbReference type="EnsemblBacteria" id="CTQ72294">
        <property type="protein sequence ID" value="CTQ72294"/>
        <property type="gene ID" value="LAX5112_03129"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="2">
        <location>
            <begin position="3"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="1">
        <location>
            <position position="52"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ72294.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="119" mass="13381" checksum="5F7955BA635B89F8" modified="2015-12-09" version="1">MPRILLAEDDNDMRRFLAKALENAGYDVVSFDNGKSAYERLREEPFSLLLTDIVMPEMDGIELARRATQLDPDLKVMFITGFAAVALNPESDAPKDAKVLSKPFHLKDLVQEVERMLAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFW9</accession>
    <name>A0A0M7AFW9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Double-strand break repair protein AddB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03555</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73501.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03555"/>
    <dbReference type="EnsemblBacteria" id="CTQ73501">
        <property type="protein sequence ID" value="CTQ73501"/>
        <property type="gene ID" value="LAX5112_03555"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.320.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014153">
        <property type="entry name" value="Ds_break_AddB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011604">
        <property type="entry name" value="PDDEXK-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038726">
        <property type="entry name" value="PDDEXK_AddAB-type"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12705">
        <property type="entry name" value="PDDEXK_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02786">
        <property type="entry name" value="addB_alphas"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PDDEXK_1" evidence="2">
        <location>
            <begin position="539"/>
            <end position="771"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="48"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="50"/>
            <end position="69"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF12705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ73501.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="815" mass="88380" checksum="A19F84C7EB12E4F2" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGR6</accession>
    <name>A0A0M7AGR6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">UPF0314 protein LAX5112_03378</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">LAX5112_03378</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the UPF0314 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72943.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672784.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03378"/>
    <dbReference type="EnsemblBacteria" id="CTQ72943">
        <property type="protein sequence ID" value="CTQ72943"/>
        <property type="gene ID" value="LAX5112_03378"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01514">
        <property type="entry name" value="UPF0314"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019691">
        <property type="entry name" value="DUF2585"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10755">
        <property type="entry name" value="DUF2585"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 5" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="56"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="112"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="142"/>
            <end position="160"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01514"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ72943.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="184" mass="20905" checksum="1AD2E214FA33CA21" modified="2015-12-09" version="1">MTNRACLITGLLMFAATAAILLAMGRIPICECGYVRFWTPASDVAGSSQHIADWYTFSHIIHGFLFYWLLWILLRRRSVGERALGAIFIEAAWEVAENSPWIIDRYREATIAVGYTGDSVLNSVFDILWMLAGFLFAWRMPVWLTVTVGIVFELLALWVIRDNLTLNVLMLIYPVDAIKVWQAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHM7</accession>
    <name>A0A0M7AHM7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative peroxidase-related enzyme</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03692</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ73916.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451182.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03692"/>
    <dbReference type="EnsemblBacteria" id="CTQ73916">
        <property type="protein sequence ID" value="CTQ73916"/>
        <property type="gene ID" value="LAX5112_03692"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004601">
        <property type="term" value="F:peroxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051920">
        <property type="term" value="F:peroxiredoxin activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1290.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029032">
        <property type="entry name" value="AhpD-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004675">
        <property type="entry name" value="AhpD_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003779">
        <property type="entry name" value="CMD-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010195">
        <property type="entry name" value="Uncharacterised_peroxidase-rel"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02627">
        <property type="entry name" value="CMD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69118">
        <property type="entry name" value="SSF69118"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00778">
        <property type="entry name" value="ahpD_dom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01926">
        <property type="entry name" value="peroxid_rel"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-0575">Peroxidase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CMD" evidence="1">
        <location>
            <begin position="48"/>
            <end position="96"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02627"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73916.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="188" mass="20967" checksum="BBFA5756D9712097" modified="2015-12-09" version="1">MSSKVTALQIDSNVTLSEKTQAYFDLCQEKLGLVPNVLQAYAFDDAKLRAFTDMYNDLMLADCGLSKLEREMIAVAVSSVNRCFYCLTAHGAAVRELSGDPVLGELMVMNYRVADLTVRQRAMLDFAVKLTEKPAEILESDRQGLRDAGFSDRDIWDIASVAAFFNMTNRVAAASDMRPNDEYHSMAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHV1</accession>
    <name>A0A0M7AHV1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="12">Methyl-accepting chemotaxis protein 4</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">mcp4_15</name>
        <name evidence="12" type="ORF">LAX5112_03803</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the methyl-accepting chemotaxis (MCP) protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74227.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74227">
        <property type="protein sequence ID" value="CTQ74227"/>
        <property type="gene ID" value="LAX5112_03803"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004888">
        <property type="term" value="F:transmembrane signaling receptor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006935">
        <property type="term" value="P:chemotaxis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004090">
        <property type="entry name" value="Chemotax_Me-accpt_rcpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004089">
        <property type="entry name" value="MCPsignal_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033480">
        <property type="entry name" value="sCache_2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00015">
        <property type="entry name" value="MCPsignal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17200">
        <property type="entry name" value="sCache_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00260">
        <property type="entry name" value="CHEMTRNSDUCR"/>
    </dbReference>
    <dbReference type="SMART" id="SM01049">
        <property type="entry name" value="Cache_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00283">
        <property type="entry name" value="MA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50111">
        <property type="entry name" value="CHEMOTAXIS_TRANSDUC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0807">Transducer</keyword>
    <keyword evidence="3 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 9" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="20"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="188"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="11">
        <location>
            <begin position="216"/>
            <end position="269"/>
        </location>
    </feature>
    <feature type="domain" description="Methyl-accepting transducer" evidence="10">
        <location>
            <begin position="316"/>
            <end position="531"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="8">
        <location>
            <begin position="527"/>
            <end position="561"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00029447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ74227.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="568" mass="60036" checksum="37550B80C0A5D1EF" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AI11</accession>
    <name>A0A0M7AI11_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Penicillin-binding protein 1A</fullName>
            <ecNumber evidence="7">2.4.1.129</ecNumber>
            <ecNumber evidence="6">3.4.16.4</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="21" type="primary">mrcA</name>
        <name evidence="21" type="ORF">LAX5112_03536</name>
    </gene>
    <organism evidence="21 22">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="22" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="22">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="16">
            <text>[GlcNAc-(1-&gt;4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)](n)-di-trans,octa-cis-undecaprenyl diphosphate + beta-D-GlcNAc-(1-&gt;4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)-di-trans,octa-cis-undecaprenyl diphosphate = [GlcNAc-(1-&gt;4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)](n+1)-di-trans-octa-cis-undecaprenyl diphosphate + di-trans,octa-cis-undecaprenyl diphosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:23708"/>
            <dbReference type="Rhea" id="RHEA-COMP:9602"/>
            <dbReference type="Rhea" id="RHEA-COMP:9603"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:58405"/>
            <dbReference type="ChEBI" id="CHEBI:60033"/>
            <dbReference type="ChEBI" id="CHEBI:78435"/>
            <dbReference type="EC" id="2.4.1.129"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3">Cell wall biogenesis; peptidoglycan biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Single-pass type II membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Single-pass type II membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">In the C-terminal section; belongs to the transpeptidase family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5">In the N-terminal section; belongs to the glycosyltransferase 51 family.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.129" evidence="7"/>
    <dbReference type="EC" id="3.4.16.4" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73413.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672903.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03536"/>
    <dbReference type="EnsemblBacteria" id="CTQ73413">
        <property type="protein sequence ID" value="CTQ73413"/>
        <property type="gene ID" value="LAX5112_03536"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00219"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008658">
        <property type="term" value="F:penicillin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008955">
        <property type="term" value="F:peptidoglycan glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009002">
        <property type="term" value="F:serine-type D-Ala-D-Ala carboxypeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046677">
        <property type="term" value="P:response to antibiotic"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3810.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.710.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012338">
        <property type="entry name" value="Beta-lactam/transpept-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001264">
        <property type="entry name" value="Glyco_trans_51"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023346">
        <property type="entry name" value="Lysozyme-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036950">
        <property type="entry name" value="PBP_transglycosylase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031376">
        <property type="entry name" value="PCB_OB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001460">
        <property type="entry name" value="PCN-bd_Tpept"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17092">
        <property type="entry name" value="PCB_OB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00912">
        <property type="entry name" value="Transgly"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00905">
        <property type="entry name" value="Transpeptidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53955">
        <property type="entry name" value="SSF53955"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56601">
        <property type="entry name" value="SSF56601"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="14" id="KW-0046">Antibiotic resistance</keyword>
    <keyword evidence="9" id="KW-0121">Carboxypeptidase</keyword>
    <keyword evidence="11" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="12" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="17" id="KW-0472">Membrane</keyword>
    <keyword evidence="15" id="KW-0511">Multifunctional enzyme</keyword>
    <keyword evidence="10" id="KW-0645">Protease</keyword>
    <keyword evidence="22" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="13" id="KW-0735">Signal-anchor</keyword>
    <keyword evidence="11" id="KW-0808">Transferase</keyword>
    <keyword evidence="17" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="17" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="17">
        <location>
            <begin position="7"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="domain" description="Transgly" evidence="19">
        <location>
            <begin position="59"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="domain" description="PCB_OB" evidence="20">
        <location>
            <begin position="326"/>
            <end position="439"/>
        </location>
    </feature>
    <feature type="domain" description="Transpeptidase" evidence="18">
        <location>
            <begin position="441"/>
            <end position="732"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004249"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004606"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004752"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00007090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00007739"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00012448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00012555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00018638"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022645"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00022968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00023268"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00023988"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="18">
        <source>
            <dbReference type="Pfam" id="PF00905"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="19">
        <source>
            <dbReference type="Pfam" id="PF00912"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="20">
        <source>
            <dbReference type="Pfam" id="PF17092"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="21">
        <source>
            <dbReference type="EMBL" id="CTQ73413.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="22">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="817" mass="89611" checksum="ABF995C2D5F402AF" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIT5</accession>
    <name>A0A0M7AIT5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">RNA pyrophosphohydrolase</fullName>
            <ecNumber evidence="2">3.6.1.-</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="2">(Di)nucleoside polyphosphate hydrolase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="2 4" type="primary">rppH</name>
        <name evidence="2" type="synonym">nudH</name>
        <name evidence="4" type="ORF">LAX5112_03623</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the Nudix hydrolase family. RppH subfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.1.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73683.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03623"/>
    <dbReference type="EnsemblBacteria" id="CTQ73683">
        <property type="protein sequence ID" value="CTQ73683"/>
        <property type="gene ID" value="LAX5112_03623"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016462">
        <property type="term" value="F:pyrophosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="CDD" id="cd03671">
        <property type="entry name" value="Ap4A_hydrolase_plant_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00298">
        <property type="entry name" value="Nudix_RppH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020476">
        <property type="entry name" value="Nudix_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015797">
        <property type="entry name" value="NUDIX_hydrolase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000086">
        <property type="entry name" value="NUDIX_hydrolase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022927">
        <property type="entry name" value="RppH"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00293">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00502">
        <property type="entry name" value="NUDIXFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55811">
        <property type="entry name" value="SSF55811"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51462">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nudix hydrolase" evidence="3">
        <location>
            <begin position="18"/>
            <end position="169"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="Nudix box" evidence="2">
        <location>
            <begin position="57"/>
            <end position="78"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00298"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51462"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ73683.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="176" mass="20114" checksum="876CAC3711267D7D" modified="2015-12-09" version="1">MTKLDLGPGYPESVDGLPYRPCVGIMLINRDGKVWVGSRSPEANKNCYDYKWQMPQGGIDAGETPEGAARRELYEETSIHSVTLLEEAPEWFAYDYPDEIARSSRKGKYRGQAQRWLAYRFEGSDGEINVLTPPDGHSAEFEEWRWEDVARLPELIVPFKRPVYEKVVAAFSHLTI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJK2</accession>
    <name>A0A0M7AJK2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Cation efflux system protein CzcA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">czcA_4</name>
        <name evidence="3" type="ORF">LAX5112_03924</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74622.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673240.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03924"/>
    <dbReference type="EnsemblBacteria" id="CTQ74622">
        <property type="protein sequence ID" value="CTQ74622"/>
        <property type="gene ID" value="LAX5112_03924"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.2090.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027463">
        <property type="entry name" value="AcrB_DN_DC_subdom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001036">
        <property type="entry name" value="Acrflvin-R"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32063">
        <property type="entry name" value="PTHR32063"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00873">
        <property type="entry name" value="ACR_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00702">
        <property type="entry name" value="ACRIFLAVINRP"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82714">
        <property type="entry name" value="SSF82714"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="336"/>
            <end position="354"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="361"/>
            <end position="382"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="388"/>
            <end position="413"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="434"/>
            <end position="454"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="460"/>
            <end position="482"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="522"/>
            <end position="542"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="859"/>
            <end position="878"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="885"/>
            <end position="905"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="911"/>
            <end position="932"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="960"/>
            <end position="980"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="986"/>
            <end position="1009"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1017"/>
            <end position="1038"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ74622.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="1038" mass="113232" checksum="B076481540587945" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJK9</accession>
    <name>A0A0M7AJK9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04106</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ75069.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04106"/>
    <dbReference type="EnsemblBacteria" id="CTQ75069">
        <property type="protein sequence ID" value="CTQ75069"/>
        <property type="gene ID" value="LAX5112_04106"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75069.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="288" mass="31164" checksum="E0C71D0D69318D59" modified="2015-12-09" version="1">MRRPAPQTLDDIRHPGPQAQDRLPHAFCHATKIEFRVLAGEPLLEALGRRADDAGFSSAVLNLSGVNLAAFDYVMPDRAIDDRHAAWYSDTHSSKGTQLEEAVAILGWRDGTWFAHVHAYWQENDAWHLGHLLPETLTISDDANISGHGLVGARFEASLDLETEFTLFRVKSDRNAMSGKTANALITTLAPFTDLHEGIAKLGNQLPGSGYSVLGLGSLAGAQFEDGPPMTGLISEILLQNGAGSPKNGKLSLPLRTVDLNKDLFQGRAKPGKCPTLVTNELLLVSKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJY3</accession>
    <name>A0A0M7AJY3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Inner membrane protein YiaV</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yiaV_2</name>
        <name evidence="3" type="ORF">LAX5112_03896</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74540.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673201.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03896"/>
    <dbReference type="EnsemblBacteria" id="CTQ74540">
        <property type="protein sequence ID" value="CTQ74540"/>
        <property type="gene ID" value="LAX5112_03896"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039562">
        <property type="entry name" value="MFP_biotin_lipoyl_2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13533">
        <property type="entry name" value="Biotin_lipoyl_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="27"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="domain" description="Biotin_lipoyl_2" evidence="2">
        <location>
            <begin position="67"/>
            <end position="111"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13533"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ74540.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="400" mass="43556" checksum="A62DC71CD5611D31" modified="2015-12-09" version="1">MIELTVTSIPFVLRILYLRWRGIPITLYNVHIALFAWLALAFAVFFTVFYYYPKSYTGFVPFRIVPVVSENGGTVTQIEVDNGTKVEPGQVLFRVSDETEQAAVRTAELKLAEIDKAFALAQAQVRSAQASLDREEAVLQQAVEVFEDQEELRIRQSAAYTATRYEAAVADRDAGQAKVSQAQAMLDEANLQLEEVIPAQRASAEAALKQAQVELEKTVVRSQVDGMIDQLTLHVGARASQIATNPAMIIIPDRDPEHPRRVLAGFSQVARSVLYVGMPAEVACDTNFNVAMVDSVLPARIAGIQPEIAAGQITATGRLLEPSQFSVRGEVTVLLEMVHPEHEQLLVNGSGCIVQTYDRNFGHGLGGHVLSGLGIIKAWGLRIKVWIALVTGVGLAGGGH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AK92</accession>
    <name>A0A0M7AK92_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Dihydroneopterin aldolase</fullName>
            <ecNumber evidence="2">4.1.2.25</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">folB</name>
        <name evidence="2" type="ORF">LAX5112_04280</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="4.1.2.25" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000022">
        <property type="protein sequence ID" value="CTQ75548.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673515.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000022.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04280"/>
    <dbReference type="EnsemblBacteria" id="CTQ75548">
        <property type="protein sequence ID" value="CTQ75548"/>
        <property type="gene ID" value="LAX5112_04280"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004150">
        <property type="term" value="F:dihydroneopterin aldolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006760">
        <property type="term" value="P:folic acid-containing compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1130.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006157">
        <property type="entry name" value="FolB_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043133">
        <property type="entry name" value="GTP-CH-I_C/QueF"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02152">
        <property type="entry name" value="FolB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00905">
        <property type="entry name" value="FolB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FolB" evidence="1">
        <location>
            <begin position="23"/>
            <end position="134"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00905"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75548.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="138" mass="15177" checksum="603F54F07D554984" modified="2015-12-09" version="1">MDMSALTDHEITYDIIEDGRDTIVIEGLLVAAEIGVLDSEKGRTQGLRFDVEIRTVPDYRKIVAETGSYVSYADTVFFIQDKAANGGHVELVEEWVEAVAAFALQNPLADFVTVKATKPEIFEDAAGVGIRISRKRSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AK94</accession>
    <name>A0A0M7AK94_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Dephospho-CoA kinase/protein folding accessory domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04064</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ74971.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673346.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04064"/>
    <dbReference type="EnsemblBacteria" id="CTQ74971">
        <property type="protein sequence ID" value="CTQ74971"/>
        <property type="gene ID" value="LAX5112_04064"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.460.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007344">
        <property type="entry name" value="GrpB/CoaE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043519">
        <property type="entry name" value="NT_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34822">
        <property type="entry name" value="PTHR34822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04229">
        <property type="entry name" value="GrpB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81301">
        <property type="entry name" value="SSF81301"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0418">Kinase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ74971.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="173" mass="19447" checksum="D084A2F530C30687" modified="2015-12-09" version="1">MVDLTKHAPEWAEQFEDEALRISRVLGDNLTSIHHIGSTAVPGLIAKPIIDLMAEVASLEACDEAQPAMQLLGYEAMGAYGIPGRRYFRKFNADRRRTHHLHVFLNGSDHAIRHLAFRDYLIAHPETAGEYGSLKRKLSKIDGGDWDSYVSGKDRFVQRTEQLALDWYAGRGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKX3</accession>
    <name>A0A0M7AKX3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Toluene efflux pump ttgABC operon repressor</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ttgR</name>
        <name evidence="3" type="ORF">LAX5112_04352</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75768.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673574.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000023.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75768">
        <property type="protein sequence ID" value="CTQ75768"/>
        <property type="gene ID" value="LAX5112_04352"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00440">
        <property type="entry name" value="TetR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00455">
        <property type="entry name" value="HTHTETR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50977">
        <property type="entry name" value="HTH_TETR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH tetR-type" evidence="2">
        <location>
            <begin position="2"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="1">
        <location>
            <begin position="25"/>
            <end position="44"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ75768.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="189" mass="20577" checksum="8C1C2D90EFA21D86" modified="2015-12-09" version="1">MSETEKKIIEAAIRVFVRYGARKTTMADIASEASVSRQTLYAAFGGKDDIIRASIRFITTVNLNAVRKRLPDCTSLAEQLDVYFAETIIKSFALLQSSSDAADLVAGHNEAGRAEIAASHRQHTDLVGSLLVPYTREIGQTGQSPADLARFIVAVVMGFKTEAKSREELDQLLISLKIAVLLAAGQKTY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AM74</accession>
    <name>A0A0M7AM74_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">mnmC</name>
        <name evidence="2" type="ORF">LAX5112_04344</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75747.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673568.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000023.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04344"/>
    <dbReference type="EnsemblBacteria" id="CTQ75747">
        <property type="protein sequence ID" value="CTQ75747"/>
        <property type="gene ID" value="LAX5112_04344"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016645">
        <property type="term" value="F:oxidoreductase activity, acting on the CH-NH group of donors"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008471">
        <property type="entry name" value="MnmC-like_methylTransf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05430">
        <property type="entry name" value="Methyltransf_30"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Methyltransf_30" evidence="1">
        <location>
            <begin position="118"/>
            <end position="249"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF05430"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75747.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="254" mass="27676" checksum="921447677F5A2E57" modified="2015-12-09" version="1">MTDEEQRKTAAAFGPPDLEWLDGDVPRAEGFGDTYFSKAGGLEETRHVFLSGNGLPERFEGRENFTIAEFGFGTGLNFLAAVQALESVANPPELTFISFELHPMTGEQLSRALAAFPELTDWAKKLTAVWAPQPGWTILQLGRARLVLGVGDARALIAELQNVPRVLEQAGSVALQVDAWFLDGFSPAKNPELWDEELLVATANLTAPDGTLATYTSAGWVRRNLQAAGFEIEKVKGYAGKREMVIGRKAALRN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMV1</accession>
    <name>A0A0M7AMV1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04118</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75123.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75123">
        <property type="protein sequence ID" value="CTQ75123"/>
        <property type="gene ID" value="LAX5112_04118"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ75123.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="70" mass="7868" checksum="E9229D08AF141EBF" modified="2015-12-09" version="1">MQGFRPRLEECSLFVIWLLACAVVDRLVVSAAARTVFFEHLQVHRFWALAPAIRFGLERNALPAVQGGES</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APH7</accession>
    <name>A0A0M7APH7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Ribose transport system permease protein RbsC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">rbsC_4</name>
        <name evidence="7" type="ORF">LAX5112_04557</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000026">
        <property type="protein sequence ID" value="CTQ76326.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673752.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000026.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04557"/>
    <dbReference type="EnsemblBacteria" id="CTQ76326">
        <property type="protein sequence ID" value="CTQ76326"/>
        <property type="gene ID" value="LAX5112_04557"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001851">
        <property type="entry name" value="ABC_transp_permease"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02653">
        <property type="entry name" value="BPD_transp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="29"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="58"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="85"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="109"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="139"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="177"/>
            <end position="195"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="216"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="266"/>
            <end position="288"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="300"/>
            <end position="333"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="345"/>
            <end position="365"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ76326.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="373" mass="39876" checksum="93F4A76A1952D69B" modified="2015-12-09" version="1">MTEANVAATADERVKQQSSLQKALIRPELGGMCGTIIVFTLFLIFAGDSGMFSAQGMMNWSTVSAQFMIIAVGACLLMIAGEFDLSVGSMIGFSGMMIAIFTVTLEWPVWQAILATFVMTIAIGALNGYIVVRTGLPSFIVTLAFLFILRGFTIYLPQIIERKTIIGGVDRAADGDWFAALFGGKILTGFFAWMGDAGIIDVFERGSRAGQPVVEGIPMLIVWAIALVIVGHIILTRTQFGNWIFAAGGDAQAARYVGVPVNRVKILMFMFTAFCATVFATCQVMEFGSAGADRGLLKEFEAIIAVVIGGALLTGGYGSVIGAALGALIFGVVQQGLFFAGVESSLFRVFLGVILLFAVILNTYIRRIITGER</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APU2</accession>
    <name>A0A0M7APU2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Glutathione transport system permease protein GsiD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">gsiD</name>
        <name evidence="7" type="ORF">LAX5112_04306</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000022">
        <property type="protein sequence ID" value="CTQ75624.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673535.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000022.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04306"/>
    <dbReference type="EnsemblBacteria" id="CTQ75624">
        <property type="protein sequence ID" value="CTQ75624"/>
        <property type="gene ID" value="LAX5112_04306"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="74"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="117"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="241"/>
            <end position="260"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="70"/>
            <end position="260"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ75624.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="276" mass="29385" checksum="185B933548694C95" modified="2015-12-09" version="1">MSVLFHSRTLLPGLFLSLVFVAAALISLIWVPYDTTVLNIANRMKLPSWEHWLGTDQFGRDILSMIMVGARTSIAVALVAVGIGMSVGVPLGLAAAARKGGWMDEVIMRANDLVFAFPSLLIAVMITAVFGASALNAIIAIGIFNIPVFARLTRGAALSLWNRDYILASRVAGKGPARISIEHILPNVANLLIVQGTIQFSLGILAEAGLSYVGLGAQPPTASWGRMLADSQTMISLAPHLALFPGLAILLTVLGLNLMGDGLRDLLDPKLRRARV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQ52</accession>
    <name>A0A0M7AQ52_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_04638</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the bacterial solute-binding protein 1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000027">
        <property type="protein sequence ID" value="CTQ76572.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673823.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000027.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04638"/>
    <dbReference type="EnsemblBacteria" id="CTQ76572">
        <property type="protein sequence ID" value="CTQ76572"/>
        <property type="gene ID" value="LAX5112_04638"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006059">
        <property type="entry name" value="SBP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006311">
        <property type="entry name" value="TAT_signal"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13416">
        <property type="entry name" value="SBP_bac_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-0574">Periplasm</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <keyword evidence="6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="20"/>
            <end position="39"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008520"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ76572.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="430" mass="47326" checksum="B8DD7A12B85A4993" modified="2015-12-09" version="1">MTDRLDKKGISRRSILKGGAAATGAALGSGAITGFPTIWAQNIKDVTLRQFGTGVSNLNEVAAKVKEDLGFTLEMTALDSDAVTQRAATQPDSFDIADIEYWICKKVWPTGNLQAMDTSKIKNYDKIVGIFRNGKLTPESTIAQGTAPHTVGFVEGVDGKTFVDNESGWMTLIPTIYNADTLGIRPDLIGRPISNWSELLNPEFKGKASILDISSIGIMDMAMVVESMGEYKYPDKGNMTQEEIDLTLGIFTEAKKNGQFRAFWKTFDESVNLMASGEVVIQSMWSPAITAVRSQGIPCVYQPLEEGYRSWGGGIGLSKSLSGLELDAAYEYINWYLDGWVGGFLMRQGYYSAVPETSKNFMSEDEWGFWFEGKAAEGDITNPFGTVMEKVGAVRDGGSFYDRMGAVACWNAVMDENQYMVRKWNEFIAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQC7</accession>
    <name>A0A0M7AQC7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04879</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000033">
        <property type="protein sequence ID" value="CTQ77338.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77338">
        <property type="protein sequence ID" value="CTQ77338"/>
        <property type="gene ID" value="LAX5112_04879"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010607">
        <property type="entry name" value="DUF1194"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036465">
        <property type="entry name" value="vWFA_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06707">
        <property type="entry name" value="DUF1194"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53300">
        <property type="entry name" value="SSF53300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ77338.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="249" mass="26752" checksum="BD798E69785DF294" modified="2015-12-09" version="1">MRIIVIIGVLLQGLIVSAASEELDLELVLLADATGSIDDAEIRFQRQGYAEAITDPQVLNAIADNAYGKIAITYVEWADMFSQDVVVDWMVIDGPQSAQLFAERLMAPPRQAFGRNAIGAALLKGKELIDTNEYKGLRRVIDLSADSANNWNGPSITEARDAVVNSGIVINGLAVLCRHCSGRPVSYNLEDRFFSEIIGGPGSFVVTADSADTFAAAVRKKLILEIADKRSAPDARVRFAAIEGTGAAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQL6</accession>
    <name>A0A0M7AQL6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04392</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the AHA1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75874.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673609.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000023.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04392"/>
    <dbReference type="EnsemblBacteria" id="CTQ75874">
        <property type="protein sequence ID" value="CTQ75874"/>
        <property type="gene ID" value="LAX5112_04392"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.530.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013538">
        <property type="entry name" value="Activator_of_Hsp90_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023393">
        <property type="entry name" value="START-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08327">
        <property type="entry name" value="AHSA1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006817"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75874.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="145" mass="15984" checksum="8C42647AF7E90F27" modified="2015-12-09" version="1">MTNQNVIQIERGFPVAPAVLWSLWTEAQHLSAWFGPHVSLEPSAGGAFREVWTNDGRQTVTSGTIVTFDPPTTLAWTWADDDWSGATLLMLSIVAERNGARLTLIHSGWHDLAENASGSLRDAHASGWTMHLTNLERYCLTLLGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AR39</accession>
    <name>A0A0M7AR39_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Glutathione import ATP-binding protein GsiA</fullName>
            <ecNumber evidence="8">3.6.3.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">gsiA_6</name>
        <name evidence="8" type="ORF">LAX5112_04808</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.-" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000031">
        <property type="protein sequence ID" value="CTQ77117.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673965.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000031.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04808"/>
    <dbReference type="EnsemblBacteria" id="CTQ77117">
        <property type="protein sequence ID" value="CTQ77117"/>
        <property type="gene ID" value="LAX5112_04808"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015833">
        <property type="term" value="P:peptide transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013563">
        <property type="entry name" value="Oligopep_ABC_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08352">
        <property type="entry name" value="oligo_HPY"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ABC transporter" evidence="7">
        <location>
            <begin position="4"/>
            <end position="254"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="7">
        <location>
            <begin position="304"/>
            <end position="556"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="40"/>
            <end position="47"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="347"/>
            <end position="354"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ77117.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="573" mass="63616" checksum="B718D4FCCC2938F5" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AR96</accession>
    <name>A0A0M7AR96_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Chalcone_isomerase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04993</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000038">
        <property type="protein sequence ID" value="CTQ77648.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04993"/>
    <dbReference type="EnsemblBacteria" id="CTQ77648">
        <property type="protein sequence ID" value="CTQ77648"/>
        <property type="gene ID" value="LAX5112_04993"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016872">
        <property type="term" value="F:intramolecular lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.70.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016087">
        <property type="entry name" value="Chalcone_isomerase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016088">
        <property type="entry name" value="Chalcone_isomerase_3-sand"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16036">
        <property type="entry name" value="Chalcone_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Chalcone_isomerase" evidence="1">
        <location>
            <begin position="19"/>
            <end position="130"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF16036"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77648.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="133" mass="14408" checksum="A4FE3CFF6665FA01" modified="2015-12-09" version="1">MKFLGFNVFDAELYAPNGVYSSSNPFALRLTYLRNFKGKAIAEKSAEEMAKQGVSTAQLDGWTKQMTAIFPNVSSGQSITGVRTASGSSVFYLGNKEIGTIADPAFTKHFFDIWLGSNTQNPRLRAKLVGAGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARC9</accession>
    <name>A0A0M7ARC9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Flp pilus assembly protein, pilin Flp</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04836</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000032">
        <property type="protein sequence ID" value="CTQ77207.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008193098.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000032.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04836"/>
    <dbReference type="EnsemblBacteria" id="CTQ77207">
        <property type="protein sequence ID" value="CTQ77207"/>
        <property type="gene ID" value="LAX5112_04836"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007047">
        <property type="entry name" value="Flp_Fap"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04964">
        <property type="entry name" value="Flp_Fap"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="28"/>
            <end position="46"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77207.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="72" mass="7847" checksum="F9D869EEF61F043A" modified="2015-12-09" version="1">MYSVTKQFLVNQFTRLIHDRSGATMVEYGLLVATLSIAILLTVGSIGETVRDDIFQVISNVMLTGANEAAQN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARG0</accession>
    <name>A0A0M7ARG0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 7 8">Transcription elongation factor GreA</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Transcript cleavage factor GreA</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7 11" type="primary">greA</name>
        <name evidence="11" type="ORF">LAX5112_04718</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6 7 8">Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 7 8">Belongs to the GreA/GreB family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000029">
        <property type="protein sequence ID" value="CTQ76830.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673893.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000029.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04718"/>
    <dbReference type="EnsemblBacteria" id="CTQ76830">
        <property type="protein sequence ID" value="CTQ76830"/>
        <property type="gene ID" value="LAX5112_04718"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070063">
        <property type="term" value="F:RNA polymerase binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032784">
        <property type="term" value="P:regulation of DNA-templated transcription, elongation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.180">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.50.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00105">
        <property type="entry name" value="GreA_GreB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036953">
        <property type="entry name" value="GreA/GreB_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018151">
        <property type="entry name" value="TF_GreA/GreB_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006359">
        <property type="entry name" value="Tscrpt_elong_fac_GreA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028624">
        <property type="entry name" value="Tscrpt_elong_fac_GreA/B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001437">
        <property type="entry name" value="Tscrpt_elong_fac_GreA/B_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023459">
        <property type="entry name" value="Tscrpt_elong_fac_GreA/B_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022691">
        <property type="entry name" value="Tscrpt_elong_fac_GreA/B_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036805">
        <property type="entry name" value="Tscrpt_elong_fac_GreA/B_N_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30437">
        <property type="entry name" value="PTHR30437"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01272">
        <property type="entry name" value="GreA_GreB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03449">
        <property type="entry name" value="GreA_GreB_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006092">
        <property type="entry name" value="GreA_GreB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46557">
        <property type="entry name" value="SSF46557"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01462">
        <property type="entry name" value="greA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00829">
        <property type="entry name" value="GREAB_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00830">
        <property type="entry name" value="GREAB_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7 8" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 7 8" id="KW-0804">Transcription</keyword>
    <keyword evidence="3 7 8" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="GreA_GreB_N" evidence="10">
        <location>
            <begin position="4"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="domain" description="GreA_GreB" evidence="9">
        <location>
            <begin position="82"/>
            <end position="155"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008213"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00013729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00024916"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00105"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU000556"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF01272"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF03449"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ76830.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="157" mass="17013" checksum="D936B702F918A40C" modified="2015-12-09" version="1">MEKVPMTSAGYTMLQSELKERTGVERPRIVDAISEARAHGDLSENAEYHAAKEAQSLNEGRIAELEDKLSRAEIIDVSKLSGEVVKFGATVSLVDEDTEEEKKYMIVGDVESDVKQSKVSISSPIARALIGKTVGDSVEVAAPGGARSYEIVEVQFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARM8</accession>
    <name>A0A0M7ARM8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04868</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000033">
        <property type="protein sequence ID" value="CTQ77307.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77307">
        <property type="protein sequence ID" value="CTQ77307"/>
        <property type="gene ID" value="LAX5112_04868"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809563" evidence="1">
        <location>
            <begin position="22"/>
            <end position="391"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77307.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="391" mass="42937" checksum="24860202C19C3D74" modified="2015-12-09" version="1">MKAFGILCGFLVLFVTSSAQSSDTWTVEIAPDQSQLFPGEEMLLTNGIEALSYFKSGDPEKPLVIFVPGGFHLARVAYGYPDGNERDFLAHWLHEQGYSFLGASYPTGNKVYSKVYPAFSIRDWGKQVAAVAKHYVDQHQLSGEVIVLGWSAGGQIAQSVYEASQAAGLDMSLYVSIASTPPIPLLLAAPGAISKAPNGLSKAPQFYDLFKKYVVAQDQMNGHEIMPWPTFEADVLGDIPVALNAIMIASRFENGKFVEDLEWSLADTGGLKVTDVPFVVTISGNKVLDNDHALTDRGNWGLYQVQHLYRNLVLPALSKSEDISPAAWQSLMDRISYATSGALNARVPGNHFFWYGEVGARETVQQLEMLILRAKNLKTGIRQLIETVQKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AS71</accession>
    <name>A0A0M7AS71_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Regulatory protein spx</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">spxA</name>
        <name evidence="3" type="ORF">LAX5112_04802</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the ArsC family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000031">
        <property type="protein sequence ID" value="CTQ77100.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673975.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000031.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04802"/>
    <dbReference type="EnsemblBacteria" id="CTQ77100">
        <property type="protein sequence ID" value="CTQ77100"/>
        <property type="gene ID" value="LAX5112_04802"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006660">
        <property type="entry name" value="Arsenate_reductase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006504">
        <property type="entry name" value="Tscrpt_reg_Spx/MgsR"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30041">
        <property type="entry name" value="PTHR30041"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03960">
        <property type="entry name" value="ArsC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01617">
        <property type="entry name" value="arsC_related"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51353">
        <property type="entry name" value="ARSC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007198"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01282"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ77100.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="119" mass="13393" checksum="7A398F2ACBCB351D" modified="2015-12-09" version="1">MKVYGIKNCDTVKKARKFLDEAGVEYSFHDYKKDGVDADKLAKFVGDFGWEAVLNKRGTTWRRLDEATQEGVTDAKSALDVMIENPSVIKRPIVEGAEKNFIGFDAVAWEMALELGEMK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ATL8</accession>
    <name>A0A0M7ATL8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">L-arabonate dehydratase</fullName>
            <ecNumber evidence="3">4.2.1.25</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">araC_2</name>
        <name evidence="3" type="ORF">LAX5112_04810</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the IlvD/Edd family.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.25" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000031">
        <property type="protein sequence ID" value="CTQ77123.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673966.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000031.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04810"/>
    <dbReference type="EnsemblBacteria" id="CTQ77123">
        <property type="protein sequence ID" value="CTQ77123"/>
        <property type="gene ID" value="LAX5112_04810"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050020">
        <property type="term" value="F:L-arabinonate dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019752">
        <property type="term" value="P:carboxylic acid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044238">
        <property type="term" value="P:primary metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.30.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042096">
        <property type="entry name" value="Dihydro-acid_dehy_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000581">
        <property type="entry name" value="DiOHA_6PGluconate_deHydtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020558">
        <property type="entry name" value="DiOHA_6PGluconate_deHydtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037237">
        <property type="entry name" value="IlvD/EDD_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00920">
        <property type="entry name" value="ILVD_EDD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF143975">
        <property type="entry name" value="SSF143975"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00886">
        <property type="entry name" value="ILVD_EDD_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3" id="KW-0456">Lyase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006486"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ77123.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="598" mass="64450" checksum="F04F17D90ADD8813" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AUE7</accession>
    <name>A0A0M7AUE7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DNA (cytosine-5-)-methyltransferase</fullName>
            <ecNumber evidence="2">2.1.1.37</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">hhaIM</name>
        <name evidence="7" type="ORF">LAX5112_04905</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>a 2'-deoxycytidine in DNA + S-adenosyl-L-methionine = a 5-methyl-2'-deoxycytidine in DNA + H(+) + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:13681"/>
            <dbReference type="Rhea" id="RHEA-COMP:11369"/>
            <dbReference type="Rhea" id="RHEA-COMP:11370"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:85452"/>
            <dbReference type="ChEBI" id="CHEBI:85454"/>
            <dbReference type="EC" id="2.1.1.37"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.1.1.37" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000034">
        <property type="protein sequence ID" value="CTQ77423.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04905"/>
    <dbReference type="EnsemblBacteria" id="CTQ77423">
        <property type="protein sequence ID" value="CTQ77423"/>
        <property type="gene ID" value="LAX5112_04905"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003886">
        <property type="term" value="F:DNA (cytosine-5-)-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009307">
        <property type="term" value="P:DNA restriction-modification system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001525">
        <property type="entry name" value="C5_MeTfrase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00145">
        <property type="entry name" value="DNA_methylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 7" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0680">Restriction system</keyword>
    <keyword evidence="4 7" id="KW-0808">Transferase</keyword>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="154"/>
            <end position="198"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000743"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022747"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ77423.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="268" mass="29460" checksum="EEAE309B7C09027F" modified="2015-12-09" version="1">MLTSRQNVHTLVARMEDKALDNAPVWSDVKSFHGRPWAGKLHILSAGYPCQPFSSSGLRRGRDDPRHLWPDVARIIGETGPEWVFCENVEGHLDRGFEEVAGDLSELGYSVKAGLFSAAEVGASHIRKRLFILAHADNQPLLQPDRHFDQSGRVPVPAGNRSGWKPAQSRQHSSGLDGVLGTDEGHRPETGTDTSLPVFAPPPCDLEAWDAHLSRRLDLQPELFGLDDGLAYRVERSRAAGNGVVPLAAAYAFRTLKAAYLGLTDRRF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZNM5</accession>
    <name>A0A0M6ZNM5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Sarcosine oxidase, delta subunit family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00058</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63766.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008190152.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00058"/>
    <dbReference type="EnsemblBacteria" id="CTQ63766">
        <property type="protein sequence ID" value="CTQ63766"/>
        <property type="gene ID" value="LAX5112_00058"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008115">
        <property type="term" value="F:sarcosine oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046653">
        <property type="term" value="P:tetrahydrofolate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.2270.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006279">
        <property type="entry name" value="SoxD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038561">
        <property type="entry name" value="SoxD_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04267">
        <property type="entry name" value="SoxD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01374">
        <property type="entry name" value="soxD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ63766.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="101" mass="11747" checksum="3C7C29B491D8E02C" modified="2015-12-09" version="1">MLLVYCPYCQVERPETEFSCRGQAHIARPSDPAEVTDEGWVEYLYMRDNTKGVYAERWRHIHGCGRFFNAVRHTVSDDFLKFYKAGEPMPDLDELAKEAGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPR3</accession>
    <name>A0A0M6ZPR3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00222</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64221.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670219.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ64221">
        <property type="protein sequence ID" value="CTQ64221"/>
        <property type="gene ID" value="LAX5112_00222"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021295">
        <property type="entry name" value="DUF2867"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11066">
        <property type="entry name" value="DUF2867"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ64221.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="176" mass="20034" checksum="D78DB34997A390AA" modified="2015-12-09" version="1">MSAAVSLPLDSHLNAYHASKDYMDVYSGDLTGRPDLIECDMRVLAKHMTTIDMPWAQGLLKLRDRLARTVNLKTTDDLANEAPPKPLSEVGPGDRIAFFKVYEVRENEILLGEDDWHQDFRLSVFRQLTPEPKVFVSTCCKRHNFFGYAYLAAILPAHKILVKQSIDNALKRPMMN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQ14</accession>
    <name>A0A0M6ZQ14_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">MmgE/PrpD family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_00218</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the PrpD family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64210.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670215.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00218"/>
    <dbReference type="EnsemblBacteria" id="CTQ64210">
        <property type="protein sequence ID" value="CTQ64210"/>
        <property type="gene ID" value="LAX5112_00218"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.4100.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036148">
        <property type="entry name" value="MmgE/PrpD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042183">
        <property type="entry name" value="MmgE/PrpD_sf_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042188">
        <property type="entry name" value="MmgE/PrpD_sf_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005656">
        <property type="entry name" value="MmgE_PrpD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045337">
        <property type="entry name" value="MmgE_PrpD_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045336">
        <property type="entry name" value="MmgE_PrpD_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR16943">
        <property type="entry name" value="PTHR16943"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03972">
        <property type="entry name" value="MmgE_PrpD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19305">
        <property type="entry name" value="MmgE_PrpD_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103378">
        <property type="entry name" value="SSF103378"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MmgE_PrpD" evidence="2">
        <location>
            <begin position="16"/>
            <end position="240"/>
        </location>
    </feature>
    <feature type="domain" description="MmgE_PrpD_C" evidence="3">
        <location>
            <begin position="265"/>
            <end position="416"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006174"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF03972"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF19305"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ64210.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="437" mass="45977" checksum="7629805E159452B9" modified="2015-12-09" version="1">MPFVDDLIAFSAQPSADLPAPAVQLAKFSLLDWLVCGSAGVEEPVAQKLRAFGASEGGVQTASTFGGSKMPPRMAALINGAVSHALDYDDTHFSHVGHLSVGIYPAALAAAEDVGADASDLLAAFAIGAEAAIRIGTVLGAAHYNLGFHQTATAGAFGATVAASRLYGLSSEQMRAAIGLCATRASGLKSQFGTMGKPYNAGIAASNGIECAQLSRLGMTSCEDGLMGLQGFAETHNPDTTPDKSIWNEGRQNRLRFEDNKYKLHACCHGLHAMIEGLLLAKNTGVTFEDVAEFVLRTNPRWLKVCDINQPRTGLEVKFSYAWLAGMTLRGDVTGAPDTYTDALALDPGLAAFGETVTVVGDDTLTDLQADGVLKLKNGETRPVSFDLAAPLPMETLEGKLRSKAHACLGQEGDHIWSILDRLDQMNARAIGKLVAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQF0</accession>
    <name>A0A0M6ZQF0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Cobalt import ATP-binding protein CbiO</fullName>
            <ecNumber evidence="6">3.6.3.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">cbiO</name>
        <name evidence="6" type="ORF">LAX5112_00460</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.-" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64958.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670416.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00460"/>
    <dbReference type="EnsemblBacteria" id="CTQ64958">
        <property type="protein sequence ID" value="CTQ64958"/>
        <property type="gene ID" value="LAX5112_00460"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03225">
        <property type="entry name" value="ABC_cobalt_CbiO_domain1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015856">
        <property type="entry name" value="ABC_transpr_CbiO/EcfA_su"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="4"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="37"/>
            <end position="44"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ64958.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="217" mass="23891" checksum="815793B80237D8D4" modified="2015-12-09" version="1">MPLIELTDLHFSYPGQDPVLKGASLNLHAGDRLTISGHNGAGKSTLLRMIVGLLKPERGTIKAFGTVCRSEPDFRPVRQKAGFVFQDPDDQLFCPTVAEDIAFGPLNLGKSRDEAAEIVETVLRNLDLISLKDRITYKLSGGEKRLVSLATVLAMDPEVLLLDEPTNALDEKNEAQLMEILFGLPQAMIIVSHDADFREKLSTRAQQLDDGILVNRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQS0</accession>
    <name>A0A0M6ZQS0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Histidine--tRNA ligase</fullName>
            <ecNumber evidence="2">6.1.1.21</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">hisS_2</name>
        <name evidence="2" type="ORF">LAX5112_00326</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="6.1.1.21" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64581.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670326.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00326"/>
    <dbReference type="EnsemblBacteria" id="CTQ64581">
        <property type="protein sequence ID" value="CTQ64581"/>
        <property type="gene ID" value="LAX5112_00326"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004821">
        <property type="term" value="F:histidine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.930.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045864">
        <property type="entry name" value="aa-tRNA-synth_II/BPL/LPL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041715">
        <property type="entry name" value="HisRS-like_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004516">
        <property type="entry name" value="HisRS/HisZ"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43707">
        <property type="entry name" value="PTHR43707"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13393">
        <property type="entry name" value="tRNA-synt_His"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001549">
        <property type="entry name" value="His-tRNA_synth"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55681">
        <property type="entry name" value="SSF55681"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0436">Ligase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="tRNA-synt_His" evidence="1">
        <location>
            <begin position="17"/>
            <end position="378"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13393"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64581.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="384" mass="40409" checksum="AEFF9226351FA03F" modified="2015-12-09" version="1">MATAGDTPALDPAKIDAVLNLFQAAGHAPVSPPMLQPANVLLDLIGEDIRRRLYLTQGADGADLCLRPDFTIPVCRHHVAYGDNALPTGYCYHGPVFRQRPDGLGEIPQMGAESLGRTDIAEADADLLALAIEALSAFGLQDVAIRIGDETIFAAVLAGLGLPVVWQRRLRDLFGETDKLAAAVERMAGGPTSDDETRDVRLGFLAALEGADPKAAHAVVEDLLSIAGISAVGGRTPAEIADRFLEQAALTRGTAGHGKAADALESYLAIKTDGADAVSALNAFAAEYDLDLNQPIAAFEQRLGALADKGIDQARLSFAADFGRRLDYYSGFVFEIHGDTGSHDGPLVGGGRYDKLVTLLGAKTDVPAIGFSIWLDRIAARIGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZR11</accession>
    <name>A0A0M6ZR11_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Response regulator FixJ</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_00399</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64777.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00399"/>
    <dbReference type="EnsemblBacteria" id="CTQ64777">
        <property type="protein sequence ID" value="CTQ64777"/>
        <property type="gene ID" value="LAX5112_00399"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="2">
        <location>
            <begin position="7"/>
            <end position="122"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ64777.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="397" mass="44806" checksum="30CD0262D8B185A8" modified="2015-12-09" version="1">MMKREEMIVVVDPDVSVQSAMTKLFSEHHALSCFSDAEAAIEFLKKHPATAVVFSCYNIPEYDGVAFLSECAVVAPQAARIMLTREGSKDVIKKALNEGHAFMYLEKPCQRAEIISALEAGLSHHRQLAKERALLERTLSGSVKMLIEMLSVFHPEAFRRTPIIRQQAVRLAREIGLKKTWELEMAVMLSPLGEAMLPKEILSRYRAARNLSDEERSILAKAPEQTRDLLQNIPQLERVADYLYLSACGYDGSGFPENGPEGDKIPLVSRILKLLTDLWYASPEGGPDAAAFDALMINWRQYDPRLLELAKEILLKEKPAEQKTLFQHCYIRSLRPGDVLVDDVRTETSFELVLARGHLLTPTMIRRLEHFNKTSGVRQPIRVRRSKAAEPVLNETA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZR43</accession>
    <name>A0A0M6ZR43_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Inner membrane amino-acid ABC transporter permease protein YhdY</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">yhdY</name>
        <name evidence="10" type="ORF">LAX5112_00106</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="8">Cell membrane</location>
            <topology evidence="8">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63893.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008190481.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00106"/>
    <dbReference type="EnsemblBacteria" id="CTQ63893">
        <property type="protein sequence ID" value="CTQ63893"/>
        <property type="gene ID" value="LAX5112_00106"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006865">
        <property type="term" value="P:amino acid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010065">
        <property type="entry name" value="AA_ABC_transptr_permease_3TM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043429">
        <property type="entry name" value="ArtM/GltK/GlnP/TcyL/YhdX-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30614">
        <property type="entry name" value="PTHR30614"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01726">
        <property type="entry name" value="HEQRo_perm_3TM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0029">Amino-acid transport</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="8" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="41"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="113"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="137"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="169"/>
            <end position="198"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="219"/>
            <end position="237"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="249"/>
            <end position="269"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="290"/>
            <end position="312"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="352"/>
            <end position="373"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="9">
        <location>
            <begin position="174"/>
            <end position="370"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ63893.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="383" mass="42308" checksum="A2E8ED4F1C9A3AA0" modified="2015-12-09" version="1">MSKTEVFQVRTEEAPLLPAPISTTGVIGWMRQNLFSSIGNTILTLIGVLLAYSMLAPFIQFAFIDAVWTGDNREACLPQDGGHSGACWAYVEAYFPQFIYGRYPVEERYRVDIVYALFALLLVPLAIPSAPFKKINAILFLVVFPIIAYFLLTGLVIGDNVVLPIVETAVWGGLLVTLVIAVTGIVASLPLGVALALGRRSKMPIIKLVSIIFIEFWRGVPLITVLFMSSVMLPLFLPEGVTFDKLLRVLIGVTLFSAAYMAEVVRGGLQAIPKGQYEGAMALGLRFWPMMYLIILPQALKLVIPGIVNTFIGLFKDTTLVLIVGMFDLLGQIQSSFTDPTWSTPSQGHTGYLFAAIIFFVFCFGMSRYSIYMEKKLHTGHKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="33" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRG1</accession>
    <name>A0A0M6ZRG1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="14">Phenylalanine--tRNA ligase beta subunit</fullName>
            <ecNumber evidence="14">6.1.1.20</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="14">Phenylalanyl-tRNA synthetase beta subunit</fullName>
            <shortName evidence="14">PheRS</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="14 19" type="primary">pheT</name>
        <name evidence="19" type="ORF">LAX5112_00603</name>
    </gene>
    <organism evidence="19 20">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="20" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="20">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 14">
            <text>ATP + L-phenylalanine + tRNA(Phe) = AMP + diphosphate + H(+) + L-phenylalanyl-tRNA(Phe)</text>
            <dbReference type="Rhea" id="RHEA:19413"/>
            <dbReference type="Rhea" id="RHEA-COMP:9668"/>
            <dbReference type="Rhea" id="RHEA-COMP:9699"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:58095"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78531"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.20"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="14">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="14">Binds 2 magnesium ions per tetramer.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4 14">Tetramer of two alpha and two beta subunits.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 14">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 14">Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.</text>
    </comment>
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        <property type="protein sequence ID" value="CTQ65369.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00603"/>
    <dbReference type="EnsemblBacteria" id="CTQ65369">
        <property type="protein sequence ID" value="CTQ65369"/>
        <property type="gene ID" value="LAX5112_00603"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004826">
        <property type="term" value="F:phenylalanine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006432">
        <property type="term" value="P:phenylalanyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00769">
        <property type="entry name" value="PheRS_beta_core"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd02796">
        <property type="entry name" value="tRNA_bind_bactPheRS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.380">
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.40.10">
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="Phe_tRNA_synth_beta1"/>
        <property type="match status" value="1"/>
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        <property type="entry name" value="aa-tRNA-synth_II/BPL/LPL"/>
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        <property type="entry name" value="B3/B4_tRNA-bd"/>
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        <property type="entry name" value="DNA-bd_dom_put_sf"/>
    </dbReference>
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        <property type="entry name" value="Fdx_antiC-bd"/>
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        <property type="entry name" value="Fdx_antiC-bd_sf"/>
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        <property type="entry name" value="NA-bd_OB-fold"/>
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        <property type="entry name" value="Phe-tRNA_synthase-like_B3/B4"/>
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        <property type="entry name" value="tRNA-bd_dom"/>
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    </dbReference>
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        <property type="entry name" value="tRNA_bind"/>
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    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="SSF54991"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="pheT_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
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    </dbReference>
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    </dbReference>
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        <property type="entry name" value="TRBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="13 14" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="9 14" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="14" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 14 19" id="KW-0436">Ligase</keyword>
    <keyword evidence="10 14" id="KW-0460">Magnesium</keyword>
    <keyword evidence="7 14" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8 14" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12 14" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="20" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="11 15" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="5 15" id="KW-0820">tRNA-binding</keyword>
    <feature type="domain" description="TRNA-binding" evidence="16">
        <location>
            <begin position="39"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="domain" description="B5" evidence="18">
        <location>
            <begin position="402"/>
            <end position="477"/>
        </location>
    </feature>
    <feature type="domain" description="FDX-ACB" evidence="17">
        <location>
            <begin position="711"/>
            <end position="804"/>
        </location>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="455"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
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        <location>
            <position position="461"/>
        </location>
        <ligand>
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        </ligand>
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        <location>
            <position position="464"/>
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        <ligand>
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        </ligand>
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            <position position="465"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
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        </ligand>
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            <dbReference type="ARBA" id="ARBA00000395"/>
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    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00008653"/>
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            <dbReference type="ARBA" id="ARBA00011209"/>
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        <source>
            <dbReference type="ARBA" id="ARBA00022555"/>
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        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
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            <dbReference type="ARBA" id="ARBA00022741"/>
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            <dbReference type="ARBA" id="ARBA00023146"/>
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            <dbReference type="PROSITE" id="PS50886"/>
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        <source>
            <dbReference type="PROSITE" id="PS51447"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="PROSITE" id="PS51483"/>
        </source>
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        <source>
            <dbReference type="EMBL" id="CTQ65369.1"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="805" mass="86601" checksum="E242E6824DA06655" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRL9</accession>
    <name>A0A0M6ZRL9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Carboxylate/amino acid/amine transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_00168</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
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        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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    </dbReference>
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    </dbReference>
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        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
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        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
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        <property type="entry name" value="EamA_dom"/>
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        <property type="entry name" value="EamA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
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    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
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    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="40"/>
            <end position="64"/>
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    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
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    <feature type="transmembrane region" description="Helical" evidence="1">
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            <end position="125"/>
        </location>
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    <feature type="transmembrane region" description="Helical" evidence="1">
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            <begin position="132"/>
            <end position="148"/>
        </location>
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    <feature type="transmembrane region" description="Helical" evidence="1">
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            <end position="214"/>
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        <location>
            <begin position="281"/>
            <end position="299"/>
        </location>
    </feature>
    <feature type="domain" description="EamA" evidence="2">
        <location>
            <begin position="17"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="domain" description="EamA" evidence="2">
        <location>
            <begin position="163"/>
            <end position="294"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="Pfam" id="PF00892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ64073.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="300" mass="30972" checksum="31C92C86825FDD95" modified="2015-12-09" version="1">MTPSAAIGQRENIPAALFLALLGMSAFTPIFAAGKLAGGVLPIVALVWLRFAGGAATILCVASVKKVPLHKQISPLWKLHLMRAVCGVGGLACAVYAASEMPLADATAIGLTKGIFAIALAGLILKELVTGKHWIAGAMSMLGAYLVVQSADNVAQNSEMALVGAIAAIASALFMAAESLIMRYIAQREDTVTILAYVNVFAALFLAVPVIWLIVQDGIAMTDLLAFAWLGPLAIIGQSFNISAYRRAGAATLAPAFYATVVLSALFGCAVWGEVPGPEALVGALLILTGGAVLTLRLGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRM3</accession>
    <name>A0A0M6ZRM3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Glutathione-binding protein GsiB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">gsiB_1</name>
        <name evidence="7" type="ORF">LAX5112_00610</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the bacterial solute-binding protein 5 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65415.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
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    <dbReference type="EnsemblBacteria" id="CTQ65415">
        <property type="protein sequence ID" value="CTQ65415"/>
        <property type="gene ID" value="LAX5112_00610"/>
    </dbReference>
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        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
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        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030288">
        <property type="term" value="C:outer membrane-bounded periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030678">
        <property type="entry name" value="Peptide/Ni-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039424">
        <property type="entry name" value="SBP_5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023765">
        <property type="entry name" value="SBP_5_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000914">
        <property type="entry name" value="SBP_5_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30290">
        <property type="entry name" value="PTHR30290"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00496">
        <property type="entry name" value="SBP_bac_5"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0574">Periplasm</keyword>
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    <feature type="signal peptide" evidence="5">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005808918" evidence="5">
        <location>
            <begin position="25"/>
            <end position="527"/>
        </location>
    </feature>
    <feature type="domain" description="SBP_bac_5" evidence="6">
        <location>
            <begin position="68"/>
            <end position="440"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ65415.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="527" mass="57080" checksum="CA601C9B75838EC0" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZS71</accession>
    <name>A0A0M6ZS71_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Flp pilus assembly protein TadB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">LAX5112_00536</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
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            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65177.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00536"/>
    <dbReference type="EnsemblBacteria" id="CTQ65177">
        <property type="protein sequence ID" value="CTQ65177"/>
        <property type="gene ID" value="LAX5112_00536"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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    </dbReference>
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        <property type="entry name" value="T2SSF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
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    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="12"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="112"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
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            <begin position="144"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="296"/>
            <end position="318"/>
        </location>
    </feature>
    <feature type="domain" description="T2SSF" evidence="7">
        <location>
            <begin position="185"/>
            <end position="313"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00482"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ65177.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="324" mass="36007" checksum="94407D0D81D06A62" modified="2015-12-09" version="1">MDLETIASAQFLAAFLAMIAVTGTIFSLVMPLLSRDTLKARMKNVALERDKLRAKERARLQTSQGDARMSLRNQPKAKMKNFVDRLNLKEMLADDSTQDRLRMAGYRGSAPIYYFLTARIAIPGGLFVFALAYAFLLAPNTIPAFSKVLFCIVFSGLGAFFPNIYLKNQIDKRKLGIQRAWPDALDLMLICVESGMSIEAAFQKVAEEIGAQSVELAEELSLTTAELSYLSERRMAYENLAKRTGVDGVKNVMMALIQAERYGTPVGTAIRNMADDTRAERMQFAEQKAASLPPKLTVPMIMFFLPVLFFVILTPAVIQAMGAF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZS89</accession>
    <name>A0A0M6ZS89_9HYPH</name>
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        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
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        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">glnL_2</name>
        <name evidence="11" type="ORF">LAX5112_00507</name>
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        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
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            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65091.1"/>
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    </dbReference>
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        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00507"/>
    <dbReference type="EnsemblBacteria" id="CTQ65091">
        <property type="protein sequence ID" value="CTQ65091"/>
        <property type="gene ID" value="LAX5112_00507"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004673">
        <property type="term" value="F:protein histidine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-0418">Kinase</keyword>
    <keyword evidence="8" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 11" id="KW-0808">Transferase</keyword>
    <keyword evidence="8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="42"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="191"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="10">
        <location>
            <begin position="212"/>
            <end position="267"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="9">
        <location>
            <begin position="281"/>
            <end position="492"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="6">
        <location>
            <begin position="248"/>
            <end position="275"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ65091.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="493" mass="53479" checksum="8E6C5BE736EDE9C3" modified="2015-12-09" version="1">MKHEGTPKGTATPDADGLGPAANPELDPGFGRHRFGGLSSKLLLLTVVFVMIAEVLIYVPSIANFRNTWLMDRLTTAGVAASVLAETNTLAPRLQEELLKTTGAVAIALDQGAQRRLIAMSNVPTQVDFVVDMAEVTPLTSILGSFAILTYRGDGVMRAVAAGQMGHTERVDIVFPVALLQQDMLAFSGRILALSLVISGITAALVYITLRAIFIRPLRRLTRSMEQFAENPEDGSRIIKVSGRRDELGDAEIRLAAMEEALSRALHQKQRLADLGLAVSKINHDLRNLLASAQLFLERLEHVPDPTVNRLAPKILATLDRAVGYTQAVMAYGKAQERAPQRRLIALHRVGEDVADVLGLVDHDTIQFENRIGETLEVDADPEQIFRVLLNLTRNAVQALEAERDGTLVRRISLSAERQANCVHIEVHDTGPGIPENTQRGLFKAFHSGAKAGGVGLGLAIVAELLRAHGGVIELDCDQPGTCFKIQLPDRTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSC3</accession>
    <name>A0A0M6ZSC3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Lactose transport system permease protein LacF</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">lacF_2</name>
        <name evidence="7" type="ORF">LAX5112_00710</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65655.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670647.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00710"/>
    <dbReference type="EnsemblBacteria" id="CTQ65655">
        <property type="protein sequence ID" value="CTQ65655"/>
        <property type="gene ID" value="LAX5112_00710"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="74"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="105"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="131"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="161"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="212"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="247"/>
            <end position="267"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="273"/>
            <end position="294"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="70"/>
            <end position="293"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ65655.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="304" mass="34086" checksum="41878D9D3DC0E8BB" modified="2015-12-09" version="1">MNRPRIRWHIAVFLAPAVLVYTTIMILPLFNTLRLALYSRIDQERIFVGLQNFMTLFGEPVWADQFWNALGNNVWFFVIHMLVQNPIGIALAAMLSHPKLRFASLYRSAIFIPTILSFVIVGFAWKLILSPIWGIAPTMLGSVGLGFLYQPWLGKEEYALTTLSLISVWQFVGIPMMLIYAALLTIPEEILEAGEIDGITGMNAFWKIKLPLILPSIGIISILTFVGNFNAFDLIYASQGALAGPDFSTDILGTFFYRTFFGFQLQLGDPHMGAAVASAMFAIILVGVCVYLFGIQTQLRRYQL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZT81</accession>
    <name>A0A0M6ZT81_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase</fullName>
            <ecNumber evidence="2">3.6.1.63</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">phnM_1</name>
        <name evidence="2" type="ORF">LAX5112_00619</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.6.1.63" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65431.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00619"/>
    <dbReference type="EnsemblBacteria" id="CTQ65431">
        <property type="protein sequence ID" value="CTQ65431"/>
        <property type="gene ID" value="LAX5112_00619"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016810">
        <property type="term" value="F:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019700">
        <property type="term" value="P:organic phosphonate catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.40.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006680">
        <property type="entry name" value="Amidohydro-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011059">
        <property type="entry name" value="Metal-dep_hydrolase_composite"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032466">
        <property type="entry name" value="Metal_Hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012696">
        <property type="entry name" value="PhnM"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01979">
        <property type="entry name" value="Amidohydro_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF038971">
        <property type="entry name" value="PhnM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51338">
        <property type="entry name" value="SSF51338"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51556">
        <property type="entry name" value="SSF51556"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Amidohydro-rel" evidence="1">
        <location>
            <begin position="250"/>
            <end position="368"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01979"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65431.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="381" mass="41460" checksum="F4A552AEABF6B64F" modified="2015-12-09" version="1">MNSISISGGDALKSDEFTRKPVNIYSGVFVESSNEFGETVDASDCYVLPGIIDVHGDAFERSIQPRPNVDFPLSLALANVDRQLIANGITTAYHGLTVSWEPGLRSYEAAANFRAHLKALRGTFSSDMHLNIRWETFALNHVHDMIDWVQDDTKSILSLNDHTTAYLDLPKTSSKISRMAGRSGLTEGQCKDLINDVWERRNEVPAAIEAICAGARDAGCSVFAHDELTPENRVEHRRLGVSVSEFPMTIATAKSAVEDGEHVVLGAPNIVRGGSQNNAIDAKESVASGHCTVLASDYYYPAPLAAAFKLVDDGVLPLERAWNLISKNAAAAAKLADRGEIAEGMRADCILVDKKTRSIRMVIANGEVKYTFNSGNQSHRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTG2</accession>
    <name>A0A0M6ZTG2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Inner membrane ABC transporter permease protein YdcV</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ydcV_1</name>
        <name evidence="7" type="ORF">LAX5112_00379</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64723.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670358.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00379"/>
    <dbReference type="EnsemblBacteria" id="CTQ64723">
        <property type="protein sequence ID" value="CTQ64723"/>
        <property type="gene ID" value="LAX5112_00379"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="7"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="61"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="99"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="130"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="176"/>
            <end position="198"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="233"/>
            <end position="254"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="62"/>
            <end position="254"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ64723.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="274" mass="29779" checksum="CB33502288E0B5BF" modified="2015-12-09" version="1">MTRGPSWFNVTSIVLGFSFLYLPIVLLVIYSFNESRLVTVWGGFSTKWYVELLQNDQLLDAAWVTLRVAFVSASVATVLGTMAALVLVRSGRFIGRSMFSGMIFAPLVMPEVILGLSLLLLFVAMDQARGFWTVIIAHTTFAMCYVAVVVQSRLVGFDKSVEEAAEDLGCPPVKTFFLITLPIILPGVIAGWMLAFTLSLDDLVIASFTTGPGATTLPMKIYSQVRLGVTPEINAVCTILVVLVSIGVIAASIATKRQQVQRERDERAAFGADG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUF7</accession>
    <name>A0A0M6ZUF7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">1,2-epoxyphenylacetyl-CoA isomerase</fullName>
            <ecNumber evidence="2">5.3.3.18</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">paaG_1</name>
        <name evidence="2" type="ORF">LAX5112_00790</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the enoyl-CoA hydratase/isomerase family.</text>
    </comment>
    <dbReference type="EC" id="5.3.3.18" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65882.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670709.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00790"/>
    <dbReference type="EnsemblBacteria" id="CTQ65882">
        <property type="protein sequence ID" value="CTQ65882"/>
        <property type="gene ID" value="LAX5112_00790"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010124">
        <property type="term" value="P:phenylacetate catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.12.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029045">
        <property type="entry name" value="ClpP/crotonase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001753">
        <property type="entry name" value="Enoyl-CoA_hydra/iso"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014748">
        <property type="entry name" value="Enoyl-CoA_hydra_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011968">
        <property type="entry name" value="PaaB1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00378">
        <property type="entry name" value="ECH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52096">
        <property type="entry name" value="SSF52096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02280">
        <property type="entry name" value="PaaB1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0413">Isomerase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005254"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65882.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="264" mass="28349" checksum="3677DFA848233220" modified="2015-12-09" version="1">MLEIQTVISEINNGVLKLTLNRPDKLNSFNEEMHLSFRAEIERAHSEKAVRSVLLTGSGRGFCAGQDLGDRDPRKGGERSDLGHTIETFYNPTLRLIRSLEKPIICAVNGVAAGAGANIALACDIVLAARSAKFIQAFSKIGLIPDAGGSWSLPRILGEPRAKALALLGEPLMAGQAESWGLIWKAVDDAALLEEATALAEKLATGPTVGLGLTKRLIQAAASQDLDTHLDMERDCQQTAGFTDDYAEGVIAFLEKRPAQFRGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUW4</accession>
    <name>A0A0M6ZUW4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">L-glyceraldehyde 3-phosphate reductase</fullName>
            <ecNumber evidence="3">1.1.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">gpr_1</name>
        <name evidence="3" type="ORF">LAX5112_00845</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the shaker potassium channel beta subunit family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.-" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66032.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670749.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00845"/>
    <dbReference type="EnsemblBacteria" id="CTQ66032">
        <property type="protein sequence ID" value="CTQ66032"/>
        <property type="gene ID" value="LAX5112_00845"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005399">
        <property type="entry name" value="K_chnl_volt-dep_bsu_KCNAB-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023210">
        <property type="entry name" value="NADP_OxRdtase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036812">
        <property type="entry name" value="NADP_OxRdtase_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43150">
        <property type="entry name" value="PTHR43150"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00248">
        <property type="entry name" value="Aldo_ket_red"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51430">
        <property type="entry name" value="SSF51430"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aldo_ket_red" evidence="2">
        <location>
            <begin position="28"/>
            <end position="327"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006515"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00248"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ66032.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="349" mass="38773" checksum="D1EFAB9AFD95A261" modified="2015-12-09" version="1">MTWTASPDRYTSMDYRRCGRSGLKLPLISLGLWHNFGDDTPHQRKQEIARTAFDLGITHFDLANNYGPAKGSAESAFGELLRTDFAPYRDEMIISSKAGYDMWPGPYGEWGSRKYLIASCDQSLKRMGLDYVDIFYSHRFDPDTPLEETMMALDHIVRSGRALYVGISSYNTKRTQEAAAILKELGTPCLIHQPSYSMINRWVEEDGLLDTLDDLGIGSIAFSPLAQGMLTNKYLKNIPEGSRATQGKSLQDQFLSDENLATIRALNAIAERRGQTLAQMALAWVLRGGRITTALIGASRAAQVIDCVGALDNLEFTEAELQEIDATAKDANINLWAASSEREGPSRKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUY6</accession>
    <name>A0A0M6ZUY6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">3-oxoacyl-[acyl-carrier-protein] synthase 3</fullName>
            <ecNumber evidence="8">2.3.1.180</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">3-oxoacyl-[acyl-carrier-protein] synthase III</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="8">Beta-ketoacyl-ACP synthase III</fullName>
            <shortName evidence="8">KAS III</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8 11" type="primary">fabH</name>
        <name evidence="11" type="ORF">LAX5112_01026</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>acetyl-CoA + H(+) + malonyl-[ACP] = 3-oxobutanoyl-[ACP] + CO2 + CoA</text>
            <dbReference type="Rhea" id="RHEA:12080"/>
            <dbReference type="Rhea" id="RHEA-COMP:9623"/>
            <dbReference type="Rhea" id="RHEA-COMP:9625"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57288"/>
            <dbReference type="ChEBI" id="CHEBI:78449"/>
            <dbReference type="ChEBI" id="CHEBI:78450"/>
            <dbReference type="EC" id="2.3.1.180"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="8">Lipid metabolism; fatty acid biosynthesis.</text>
    </comment>
    <comment type="subunit">
        <text evidence="8">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="domain">
        <text evidence="8">The last Arg residue of the ACP-binding site is essential for the weak association between ACP/AcpP and FabH.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 8">Belongs to the thiolase-like superfamily. FabH family.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.180" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66599.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451806.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01026"/>
    <dbReference type="EnsemblBacteria" id="CTQ66599">
        <property type="protein sequence ID" value="CTQ66599"/>
        <property type="gene ID" value="LAX5112_01026"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00094"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004315">
        <property type="term" value="F:3-oxoacyl-[acyl-carrier-protein] synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033818">
        <property type="term" value="F:beta-ketoacyl-acyl-carrier-protein synthase III activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006633">
        <property type="term" value="P:fatty acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.47.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01815">
        <property type="entry name" value="FabH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013751">
        <property type="entry name" value="ACP_syn_III"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013747">
        <property type="entry name" value="ACP_syn_III_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004655">
        <property type="entry name" value="FabH_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016039">
        <property type="entry name" value="Thiolase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08545">
        <property type="entry name" value="ACP_syn_III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08541">
        <property type="entry name" value="ACP_syn_III_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53901">
        <property type="entry name" value="SSF53901"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00747">
        <property type="entry name" value="fabH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 8 11" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="8" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 8" id="KW-0275">Fatty acid biosynthesis</keyword>
    <keyword evidence="4 8" id="KW-0276">Fatty acid metabolism</keyword>
    <keyword evidence="2 8" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="5 8" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="8" id="KW-0511">Multifunctional enzyme</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 8 11" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="ACP_syn_III" evidence="10">
        <location>
            <begin position="109"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="domain" description="ACP_syn_III_C" evidence="9">
        <location>
            <begin position="238"/>
            <end position="325"/>
        </location>
    </feature>
    <feature type="region of interest" description="ACP-binding" evidence="8">
        <location>
            <begin position="253"/>
            <end position="257"/>
        </location>
    </feature>
    <feature type="active site" evidence="8">
        <location>
            <position position="115"/>
        </location>
    </feature>
    <feature type="active site" evidence="8">
        <location>
            <position position="252"/>
        </location>
    </feature>
    <feature type="active site" evidence="8">
        <location>
            <position position="282"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008642"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022832"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023160"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01815"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF08541"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF08545"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ66599.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="325" mass="34846" checksum="00660E915E8D4AB2" modified="2015-12-09" version="1">MSVIRSIVTGTGSYLPEKILTNSDLAKMVDTSDDWIVQRTGIQQRHVAAEGQVTSDLAVEAALRALESAGRKADDIDTIILATATPDNTFPATSVSVQARLGINHGFAFDVHAVCSGFVYALTTADAYIRSGMSKRCLVIGAETFSRILDWNDRTTCVLFGDGAGAVVVEASEGEGNTADKGVLTSHLRSDGRHKDKLFVDGGPSSTQTVGYLRMEGKEVFKHAVGMITDVIEDAYSATGLTSEDLTWFIPHQANKRIIDASAKKLKIAPEKVVTTVQMHGNTSAASIPLALDLAVRDGRVKKDDLIMLEAMGGGFTWGSVLLRW</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVL2</accession>
    <name>A0A0M6ZVL2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Streptogramin A acetyltransferase</fullName>
            <ecNumber evidence="4">2.3.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">vatD_2</name>
        <name evidence="4" type="ORF">LAX5112_01085</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.3.1.-" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66768.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671213.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01085"/>
    <dbReference type="EnsemblBacteria" id="CTQ66768">
        <property type="protein sequence ID" value="CTQ66768"/>
        <property type="gene ID" value="LAX5112_01085"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016746">
        <property type="term" value="F:acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001451">
        <property type="entry name" value="Hexapep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018357">
        <property type="entry name" value="Hexapep_transf_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017694">
        <property type="entry name" value="Phosphonate_tfrase_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011004">
        <property type="entry name" value="Trimer_LpxA-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00132">
        <property type="entry name" value="Hexapep"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51161">
        <property type="entry name" value="SSF51161"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03308">
        <property type="entry name" value="phn_thr-fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00101">
        <property type="entry name" value="HEXAPEP_TRANSFERASES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 4" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="1 4" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ66768.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="208" mass="23478" checksum="E3F62B3555328C96" modified="2015-12-09" version="1">MSAPHQKPGLTEAPNVHPDAVVQNCELGKWTEVGALTEMRESQMDDYSYIVQEGDVVWSTIGKFCSIARRVRLNPGNHATWRASQHHFSYRAAAYGLGDDDQEFFQWRKDDWVTIGHDVWIGHNVTVLAGVTIGTGAIVAAGAVVSKDVPPYTIVGGVPAKPIKRRFTETQEKALMEIAWWDWSHDQLKERLSDFRNLPIDGFIEKYR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVQ0</accession>
    <name>A0A0M6ZVQ0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Succinate semialdehyde dehydrogenase [NAD(P)+] Sad</fullName>
            <ecNumber evidence="5">1.2.1.16</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">sad</name>
        <name evidence="5" type="ORF">LAX5112_00884</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="3">Belongs to the aldehyde dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.2.1.16" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66140.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670777.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00884"/>
    <dbReference type="EnsemblBacteria" id="CTQ66140">
        <property type="protein sequence ID" value="CTQ66140"/>
        <property type="gene ID" value="LAX5112_00884"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009013">
        <property type="term" value="F:succinate-semialdehyde dehydrogenase [NAD(P)+] activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.309.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.605.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016161">
        <property type="entry name" value="Ald_DH/histidinol_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016163">
        <property type="entry name" value="Ald_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029510">
        <property type="entry name" value="Ald_DH_CS_GLU"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016162">
        <property type="entry name" value="Ald_DH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015590">
        <property type="entry name" value="Aldehyde_DH_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00171">
        <property type="entry name" value="Aldedh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53720">
        <property type="entry name" value="SSF53720"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00687">
        <property type="entry name" value="ALDEHYDE_DEHYDR_GLU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 3 5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aldedh" evidence="4">
        <location>
            <begin position="4"/>
            <end position="454"/>
        </location>
    </feature>
    <feature type="active site" evidence="2">
        <location>
            <position position="230"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU003345"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ66140.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="461" mass="49471" checksum="478087EC81C83399" modified="2015-12-09" version="1">MTSKVTCISPIDGSVYAERPVLSADEAREAVARAKTAQLAWQERSLEDRISLVLAGVAKIGEMNDEIVPELAHQMGRPVRYGGEFGGFTERASYMAEIAAEALAPIAVADDAAFKRMIKRVPHGVVLVVAPWNYPYMTAINTVAPALIAGNSVVLKHASQTLLVGERMAKAFHEAGVPKDVFQNVFLDHATTSAMIAEKSFGFVNFTGSVGGGQAMEKAAAGTFTGVGLELGGKDPGYVMEDADLEAAVDTLIDGAMFNAGQCCCGIERIYVVESLYDAFVEKAVKIVEGYKLGNPLDPETTLGPMAHTRFAAEVRAQTQEAIADGAKALIDPAKFPEDDGGAYLMPQILVDVDHSMRVMRDESFGPVVGIMKVKDDAEAIRLMNDSNFGLTASLWTRDVARAEAIGDQIETGTIFLNRADYLDPALCWTGCKDTGRGGGLSIIGYHNLTRPKSYHLKKAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVQ8</accession>
    <name>A0A0M6ZVQ8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DNA G:T-mismatch repair endonuclease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00942</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66367.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00942"/>
    <dbReference type="EnsemblBacteria" id="CTQ66367">
        <property type="protein sequence ID" value="CTQ66367"/>
        <property type="gene ID" value="LAX5112_00942"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004519">
        <property type="term" value="F:endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007569">
        <property type="entry name" value="DUF559"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011335">
        <property type="entry name" value="Restrct_endonuc-II-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04480">
        <property type="entry name" value="DUF559"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52980">
        <property type="entry name" value="SSF52980"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0540">Nuclease</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF559" evidence="1">
        <location>
            <begin position="36"/>
            <end position="144"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04480"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66367.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="149" mass="16858" checksum="69C15D94A7F48B61" modified="2015-12-09" version="1">MSAPADRGGYTASLINDGMPVLFGNQVMPHRDIPNKNRRNAKALRSNMTEAEKRLWRGIRAHRLEGISFRRQLPIAGYIVDFAAPQQRLIVELDGSQHGDQQYIEQDRQRDETLANAGWTVLRFWNADVLQDLDAVCRKILTVCGKEGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVU3</accession>
    <name>A0A0M6ZVU3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Chaperone protein ClpB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">clpB_1</name>
        <name evidence="10" type="ORF">LAX5112_01119</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ClpA/ClpB family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66858.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670978.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01119"/>
    <dbReference type="EnsemblBacteria" id="CTQ66858">
        <property type="protein sequence ID" value="CTQ66858"/>
        <property type="gene ID" value="LAX5112_01119"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1780.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003959">
        <property type="entry name" value="ATPase_AAA_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017729">
        <property type="entry name" value="ATPase_T6SS_ClpV1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019489">
        <property type="entry name" value="Clp_ATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036628">
        <property type="entry name" value="Clp_N_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004176">
        <property type="entry name" value="Clp_R_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001270">
        <property type="entry name" value="ClpA/B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018368">
        <property type="entry name" value="ClpA/B_CS1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041546">
        <property type="entry name" value="ClpA/ClpB_AAA_lid"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00004">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07724">
        <property type="entry name" value="AAA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17871">
        <property type="entry name" value="AAA_lid_9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02861">
        <property type="entry name" value="Clp_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10431">
        <property type="entry name" value="ClpB_D2-small"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00300">
        <property type="entry name" value="CLPPROTEASEA"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM01086">
        <property type="entry name" value="ClpB_D2-small"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81923">
        <property type="entry name" value="SSF81923"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03345">
        <property type="entry name" value="VI_ClpV1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00870">
        <property type="entry name" value="CLPAB_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0143">Chaperone</keyword>
    <keyword evidence="6" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="AAA" evidence="8">
        <location>
            <begin position="224"/>
            <end position="368"/>
        </location>
    </feature>
    <feature type="domain" description="AAA" evidence="8">
        <location>
            <begin position="647"/>
            <end position="798"/>
        </location>
    </feature>
    <feature type="domain" description="ClpB_D2-small" evidence="9">
        <location>
            <begin position="818"/>
            <end position="910"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="512"/>
            <end position="548"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="6">
        <location>
            <begin position="437"/>
            <end position="489"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="7">
        <location>
            <begin position="513"/>
            <end position="542"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008675"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="SMART" id="SM01086"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ66858.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="915" mass="99712" checksum="BEB90418A2D4D73B" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZW90</accession>
    <name>A0A0M6ZW90_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">D-amino acid dehydrogenase small subunit</fullName>
            <ecNumber evidence="2">1.4.99.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">dadA_1</name>
        <name evidence="2" type="ORF">LAX5112_00755</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.4.99.1" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65784.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670679.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00755"/>
    <dbReference type="EnsemblBacteria" id="CTQ65784">
        <property type="protein sequence ID" value="CTQ65784"/>
        <property type="gene ID" value="LAX5112_00755"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006076">
        <property type="entry name" value="FAD-dep_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01266">
        <property type="entry name" value="DAO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DAO" evidence="1">
        <location>
            <begin position="3"/>
            <end position="391"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01266"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65784.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="411" mass="44974" checksum="DCC94C5F71106EAC" modified="2015-12-09" version="1">MQDVIVIGAGVIGISAALALQADGRKVTVLDRQDNSPRASDMNAGAFAFADIMPLAAPGIMRKAPKWLLDPLGPLSVPPAYAFKMLPWLVRFWRSSMPDRYQKSLVAQASLMKLSQDALERLICDTSADELIRRDGQLQLYECEREFQASLPGWELRRKHGVSFKLLKSAEEIADIQPGIDSRFSFAGFTPDWINTCDPAAWLTHLTDVFRTRGGDMIEANATQLRSTGDGVEIHSTNRTLCASQVIVAAGAWSHHLAKTLGDTIPLETERGYNTTLPATDFDLKTHLTFPGHGFVITRINDGIRVGGAVELGGLKLPANYKRAEILLEKARSFLPGLDRKTGKQWMGFRPSLPDSLPVIGHSSKDKRVIYAFGHGHLGLTQSAGTAELIRALANKTQPTIDPAAYSSGRF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZX69</accession>
    <name>A0A0M6ZX69_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">S-adenosyl-L-methionine methyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01342</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67345.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01342"/>
    <dbReference type="EnsemblBacteria" id="CTQ67345">
        <property type="protein sequence ID" value="CTQ67345"/>
        <property type="gene ID" value="LAX5112_01342"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025690">
        <property type="entry name" value="Methyltransf_put"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12692">
        <property type="entry name" value="Methyltransf_17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67345.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="165" mass="18390" checksum="64D2256CA67C1948" modified="2015-12-09" version="1">MSRLDSFIRRMTSQKIILESLIDKVNEVDGPILELGLGNGRTYDHLREIYPNKEIFVFDHALTCHPSCAPDAEHMIQGDIRDTLAFCGPRVGGKASFAHIDIGSGDPTTDLATVHWLAPMIDERMAVGGYILTGLELKLPNFEHLPNPEGIKADRNFIYRKTSEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZX84</accession>
    <name>A0A0M6ZX84_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Putative N-formylglutamate amidohydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00889</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66154.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00889"/>
    <dbReference type="EnsemblBacteria" id="CTQ66154">
        <property type="protein sequence ID" value="CTQ66154"/>
        <property type="gene ID" value="LAX5112_00889"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007709">
        <property type="entry name" value="N-FG_amidohydro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011227">
        <property type="entry name" value="UCP029730"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05013">
        <property type="entry name" value="FGase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF029730">
        <property type="entry name" value="UCP029730"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ66154.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="264" mass="29108" checksum="751A32B8991BCFFD" modified="2015-12-09" version="1">MGSNHQNGGMSRAVEVINAEGAGELVLLCDHASNHFPPPYDQCLGVSDEEKSAHISWDPGALGVAMALSEALDAPLIYTTVSRLVIDCNREETREDLTPCLSELTEISGNRNLSDEERTFRINLVHRPFHDAIDKVLALRADKGLPSAVVSIHTYTPVYKGKSRPWEIGLISENDRRLADPVLTGLNARGDLTVGDNEPYAPSDGVYYTVRRHGEDKLLPCLMIEIRNDEVRTPNEELHWADILGPLLKSAAKTVLRKEVADHA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXM3</accession>
    <name>A0A0M6ZXM3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Putative HTH-type transcriptional regulator YdfH</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ydfH_4</name>
        <name evidence="5" type="ORF">LAX5112_01404</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67505.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671240.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01404"/>
    <dbReference type="EnsemblBacteria" id="CTQ67505">
        <property type="protein sequence ID" value="CTQ67505"/>
        <property type="gene ID" value="LAX5112_01404"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07377">
        <property type="entry name" value="WHTH_GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.530">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011711">
        <property type="entry name" value="GntR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008920">
        <property type="entry name" value="TF_FadR/GntR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000524">
        <property type="entry name" value="Tscrpt_reg_HTH_GntR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07729">
        <property type="entry name" value="FCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00392">
        <property type="entry name" value="GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00345">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48008">
        <property type="entry name" value="SSF48008"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50949">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH gntR-type" evidence="4">
        <location>
            <begin position="10"/>
            <end position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ67505.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="233" mass="26537" checksum="05A2F885B5B27AC0" modified="2015-12-09" version="1">MEPLLAHSPTPDKKTIFETLRRRICLLDYQPGDSLNERLLAEEFSVSRTPMRAVLQRLEYVGLISSQHGRGTIVTSIDLNEMREIYALRIKLAESIADMPTSQLAVGLHEELISLASDTAALFGRQDKRAFGAVSIRLHDAIQLLTTNEILRDFSDTLFYQSARYWFLLLSRLDWDTEVQDMLDEVRLIARCLEAGDIPAAVTTRKVHLSLVMARITKIEDFPDLHLEDLQGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXP0</accession>
    <name>A0A0M6ZXP0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01199</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67067.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67067">
        <property type="protein sequence ID" value="CTQ67067"/>
        <property type="gene ID" value="LAX5112_01199"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67067.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="179" mass="20275" checksum="B06D27442EF52D38" modified="2015-12-09" version="1">MHITPIDPANMPGRAGERVQALDGYWTKRNGLFTREMPFGQQQLWCKSGGDGETPPQMMFKGPESFLHQIMEGKFGNDYTASVVAQDPRFARTIAAGYPIASSGYTVAEKLELEVNPPGSFKPVFVEYYRLMRRFQIGFIGLRTPIYATSVYVTPTDEWLSQFLLSTEHPYGTKGRWLH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYC2</accession>
    <name>A0A0M6ZYC2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00999</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66523.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008196109.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ66523">
        <property type="protein sequence ID" value="CTQ66523"/>
        <property type="gene ID" value="LAX5112_00999"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.410">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010607">
        <property type="entry name" value="DUF1194"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036465">
        <property type="entry name" value="vWFA_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06707">
        <property type="entry name" value="DUF1194"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53300">
        <property type="entry name" value="SSF53300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809142" evidence="1">
        <location>
            <begin position="23"/>
            <end position="275"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66523.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="275" mass="30077" checksum="183170726833ADF4" modified="2015-12-09" version="1">MKSLVSTLIAAIALLAGLFASAAVKADQPVDVALVLAVDVSRSMSAEELAIQRDGYAAAIAHPSVIRAVEQGLHGRIALTMFEWANDAHVREIVPWTLIETPQDAEDVSTIIREDQTIGQRRTSISGAIRYASKLLLDVPYQADRLVIDISGDGPNNQGAGVTRARDLAVEAGFVINGLPLMTTGGFGGQFNIPDLDEYYRRCVIGGPGSFVIPVNDWAQFPEAVRRKLVLEIGGRVPEEPARVYRAQITFGQPYDCMVGEKMWRNLRERFFLDP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYR3</accession>
    <name>A0A0M6ZYR3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Multiple resistance and pH homeostasis protein C</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">mrpC</name>
        <name evidence="6" type="ORF">LAX5112_01520</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67789.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008192232.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01520"/>
    <dbReference type="EnsemblBacteria" id="CTQ67789">
        <property type="protein sequence ID" value="CTQ67789"/>
        <property type="gene ID" value="LAX5112_01520"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039428">
        <property type="entry name" value="NUOK/Mnh_C1-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00420">
        <property type="entry name" value="Oxidored_q2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="6"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="28"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="75"/>
            <end position="96"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ67789.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="125" mass="13651" checksum="23BBA24DE519AB0C" modified="2015-12-09" version="1">METGLSILVGLFFAVSVYLMLSKQLVRMLLGIAILGNAVNMSIFVNGRLTREVPPVIPEGLMVPTEVIANPLPQALVLTAIVISFSFFAFLLVLAFRAYQEVGTDDVNEMRVAEPENDPLPPQGY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYY1</accession>
    <name>A0A0M6ZYY1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Ethanolamine utilization protein EutG</fullName>
            <ecNumber evidence="3">1.1.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">eutG</name>
        <name evidence="3" type="ORF">LAX5112_01070</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.1.-.-" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66724.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670946.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01070"/>
    <dbReference type="EnsemblBacteria" id="CTQ66724">
        <property type="protein sequence ID" value="CTQ66724"/>
        <property type="gene ID" value="LAX5112_01070"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016616">
        <property type="term" value="F:oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001670">
        <property type="entry name" value="ADH_Fe/GldA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018211">
        <property type="entry name" value="ADH_Fe_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039697">
        <property type="entry name" value="Alcohol_dehydrogenase_Fe"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11496">
        <property type="entry name" value="PTHR11496"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00465">
        <property type="entry name" value="Fe-ADH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00913">
        <property type="entry name" value="ADH_IRON_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Fe-ADH" evidence="2">
        <location>
            <begin position="11"/>
            <end position="378"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00465"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ66724.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="387" mass="40107" checksum="2DCF99B49F20EB3B" modified="2015-12-09" version="1">MVAAFTFHTSERIVFENGAAAALDRYALDFLGDRPFLVTDPGIVSLGLQEACEASLTAAGHQIDRFSEVVADPPQKLVEDAVAAAKDHGATSIIGFGGGSSLDVAKLVALLLGSGEDLNDAWGIGNAKGPRLPLILIPTTAGTGSEVTPISIITVGADEKRGVVSPHLLPDLAVLDPLLTLGLPAHVTAATGVDAMVHAIEAYASKSANNNPLSRTLAVEALKLLGANIETAVFDPGNVSARGGMLLGSKLAGMAFANSPVAAVHALAYPIGGTFHVPHGLSNALVLPHVLMFNNAVAAPIYAELAPALFPELSDLASPTERADAFAKRLAALTEKLGLQTRLSEVGISEKDLPKMARDAMKQTRLLVNNPREVTETDAFNVYAAAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYZ3</accession>
    <name>A0A0M6ZYZ3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 7">Glutamate racemase</fullName>
            <ecNumber evidence="2 7">5.1.1.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7 8" type="primary">murI</name>
        <name evidence="8" type="ORF">LAX5112_01591</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Provides the (R)-glutamate required for cell wall biosynthesis.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>L-glutamate = D-glutamate</text>
            <dbReference type="Rhea" id="RHEA:12813"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:29986"/>
            <dbReference type="EC" id="5.1.1.3"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="7">Cell wall biogenesis; peptidoglycan biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the aspartate/glutamate racemases family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="5.1.1.3" evidence="2 7"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67975.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01591"/>
    <dbReference type="EnsemblBacteria" id="CTQ67975">
        <property type="protein sequence ID" value="CTQ67975"/>
        <property type="gene ID" value="LAX5112_01591"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00219"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008881">
        <property type="term" value="F:glutamate racemase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008360">
        <property type="term" value="P:regulation of cell shape"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00258">
        <property type="entry name" value="Glu_racemase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015942">
        <property type="entry name" value="Asp/Glu/hydantoin_racemase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001920">
        <property type="entry name" value="Asp/Glu_race"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033134">
        <property type="entry name" value="Asp/Glu_racemase_AS_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004391">
        <property type="entry name" value="Glu_race"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21198:SF2">
        <property type="entry name" value="PTHR21198:SF2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01177">
        <property type="entry name" value="Asp_Glu_race"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53681">
        <property type="entry name" value="SSF53681"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00067">
        <property type="entry name" value="glut_race"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00924">
        <property type="entry name" value="ASP_GLU_RACEMASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 7" id="KW-0133">Cell shape</keyword>
    <keyword evidence="6 7" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="5 7 8" id="KW-0413">Isomerase</keyword>
    <keyword evidence="4 7" id="KW-0573">Peptidoglycan synthesis</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Substrate binding" evidence="7">
        <location>
            <begin position="11"/>
            <end position="12"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="7">
        <location>
            <begin position="76"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="7">
        <location>
            <begin position="191"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor/acceptor" evidence="7">
        <location>
            <position position="75"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor/acceptor" evidence="7">
        <location>
            <position position="190"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001602"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00013090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00258"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ67975.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="273" mass="29806" checksum="3E4A598351D8F44B" modified="2015-12-09" version="1">MKDVRPVLFYDSGLGGLTVLREARYLLPYERLVYVADDAAFPIGRWPEEDLLVRLQDQFTPLIEDHDPKAVVIACNTAFTLGGEALREAFPGVPFVGTVPAIKPAAERTASGLISVLATPGTVRRAYTRSLIESFAAQCHVRLVGSDNLAELAEQHLCGEPVSDEALLPEISDCFLEQNGQRTDIVVLACTHYPFLANRFRKIAPWPVDWLDPAEAIARQLVRVLGQDLASVPSESPDLAILTSGARKPAIERLLAGFGLALMPARELIPKSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYZ5</accession>
    <name>A0A0M6ZYZ5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01390</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67436.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671192.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67436">
        <property type="protein sequence ID" value="CTQ67436"/>
        <property type="gene ID" value="LAX5112_01390"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67436.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="75" mass="8342" checksum="67A76F0DC1824A22" modified="2015-12-09" version="1">MKTTWKRTSPDRDNDGTATTNALPGISARVYLENGGRHWYWFVNGKAAISRGQEDTKDGAKAAVEAEFERIAAER</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZA4</accession>
    <name>A0A0M6ZZA4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Cytochrome c-type biogenesis protein CcmE</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Cytochrome c maturation protein E</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">Heme chaperone CcmE</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7 9" type="primary">ccmE</name>
        <name evidence="7" type="synonym">cycJ</name>
        <name evidence="9" type="ORF">LAX5112_01361</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cell membrane</location>
            <topology evidence="7">Single-pass type II membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the CcmE/CycJ family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67380.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671169.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01361"/>
    <dbReference type="EnsemblBacteria" id="CTQ67380">
        <property type="protein sequence ID" value="CTQ67380"/>
        <property type="gene ID" value="LAX5112_01361"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017004">
        <property type="term" value="P:cytochrome complex assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017003">
        <property type="term" value="P:protein-heme linkage"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01959">
        <property type="entry name" value="CcmE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004329">
        <property type="entry name" value="CcmE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036127">
        <property type="entry name" value="CcmE-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34128">
        <property type="entry name" value="PTHR34128"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03100">
        <property type="entry name" value="CcmE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82093">
        <property type="entry name" value="SSF82093"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="3 7" id="KW-0201">Cytochrome c-type biogenesis</keyword>
    <keyword evidence="1 7 8" id="KW-0349">Heme</keyword>
    <keyword evidence="7 8" id="KW-0408">Iron</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="7 8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0735">Signal-anchor</keyword>
    <keyword evidence="2 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="topological domain" description="Cytoplasmic" evidence="7">
        <location>
            <begin position="1"/>
            <end position="7"/>
        </location>
    </feature>
    <feature type="topological domain" description="Extracellular" evidence="7">
        <location>
            <begin position="29"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="binding site" description="covalent" evidence="7 8">
        <location>
            <position position="122"/>
        </location>
        <ligand>
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </ligand>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="7 8">
        <location>
            <position position="126"/>
        </location>
        <ligand>
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022748"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01959"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR604329-50"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ67380.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="149" mass="15979" checksum="68EA8D6BF70241B8" modified="2015-12-09" version="1">MTRKQRRFTLIGSAGAVLALALGLILFALNDQIVFFQSPSDIASQQIPEGQRIRLGGLVEDGSVERSDDANVKFRVTDTAHSVAVTYQGILPDLFREGQGVVTEGVLTPGGIFVADSVLAKHDENYMPKEVAEALKDQGHWQGGEGAAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZB7</accession>
    <name>A0A0M6ZZB7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Glucose 1-dehydrogenase 2</fullName>
            <ecNumber evidence="1">1.1.1.47</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">ycdF_1</name>
        <name evidence="1" type="ORF">LAX5112_01413</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.1.1.47" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67522.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671245.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01413"/>
    <dbReference type="EnsemblBacteria" id="CTQ67522">
        <property type="protein sequence ID" value="CTQ67522"/>
        <property type="gene ID" value="LAX5112_01413"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047936">
        <property type="term" value="F:glucose 1-dehydrogenase [NAD(P)] activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67522.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="244" mass="25920" checksum="66DCC82A3C6273B6" modified="2015-12-09" version="1">MTRFEGKTALVTGGRSGIGRAIALRLRDEGARVFTAQRSEDTEFEHVCADFSDSAALAKVIPAVITASGRLDVLVNNAGLMQEASVEDMTLEVWQRSLTVNLTAPFLLIKHALPHLRMTKGAVVNVGSIEGIGCNPHHAAYAASKAGLHGLTRAIAVDHGQDGIRCNAVAPGWIDTDLNLDFISAQPDVEAFRRNIGKIHPVGRTGAPKEVAALVAFLAAEESGFITGQIYTVDGGRMSRLSLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZJ3</accession>
    <name>A0A0M6ZZJ3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Universal stress protein F</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">uspF_1</name>
        <name evidence="3" type="ORF">LAX5112_01158</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the universal stress protein A family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66963.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671007.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01158"/>
    <dbReference type="EnsemblBacteria" id="CTQ66963">
        <property type="protein sequence ID" value="CTQ66963"/>
        <property type="gene ID" value="LAX5112_01158"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006015">
        <property type="entry name" value="Universal_stress_UspA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006016">
        <property type="entry name" value="UspA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00582">
        <property type="entry name" value="Usp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01438">
        <property type="entry name" value="UNVRSLSTRESS"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Usp" evidence="2">
        <location>
            <begin position="1"/>
            <end position="142"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008791"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00582"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ66963.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="143" mass="15999" checksum="CA5F4A7F56578EF7" modified="2015-12-09" version="1">MNKTILCAVDISHPEDREVLQTADKLARLDNAQLDVITVVPNFGVTLVSSYFDENFQDEIVNDTQNKLTDIVGSVLGEDRNKEIRHVVATGSIYEEILELAKRTNTDLIVIGAHKPQLREFLLGPNAARVVRHSKCSVYVVRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZV0</accession>
    <name>A0A0M6ZZV0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01202</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67074.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671041.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67074">
        <property type="protein sequence ID" value="CTQ67074"/>
        <property type="gene ID" value="LAX5112_01202"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="41"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="66"/>
            <end position="86"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67074.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="109" mass="12277" checksum="2C1E2D2CE3E67B9F" modified="2015-12-09" version="1">MKALHEWFWDLPMTKIAVIAAFAMIGAALPKDLSARDRLMTFFVGFLAALVFGEPVRALMNLSETYAFGMAGILAMTGRNIAVFIIRASRDPKTFFKDVLEIWRGHPRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A057</accession>
    <name>A0A0M7A057_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Multiple resistance and pH homeostasis protein B</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">mrpB</name>
        <name evidence="9" type="ORF">LAX5112_01521</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67792.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040452267.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01521"/>
    <dbReference type="EnsemblBacteria" id="CTQ67792">
        <property type="protein sequence ID" value="CTQ67792"/>
        <property type="gene ID" value="LAX5112_01521"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007182">
        <property type="entry name" value="MnhB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04039">
        <property type="entry name" value="MnhB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="12"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="35"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="69"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="112"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="domain" description="MnhB" evidence="8">
        <location>
            <begin position="5"/>
            <end position="126"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF04039"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ67792.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="139" mass="14831" checksum="2FCE812EF45E2044" modified="2015-12-09" version="1">MRTVIFRTIAPYLSALMVLYSIFVLLRGHNEPGGGFIGGLIAASALAIFGIACGVAAVRRAIKVHPMSIAGFGLFMGAAAGVISLFTNQPFMTSQWWPIDLFNVQIKLSTPLIFDIGVYLVVVGAISSIALALEERESD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0W5</accession>
    <name>A0A0M7A0W5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Stringent starvation protein B</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01630</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68086.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008190511.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01630"/>
    <dbReference type="EnsemblBacteria" id="CTQ68086">
        <property type="protein sequence ID" value="CTQ68086"/>
        <property type="gene ID" value="LAX5112_01630"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.220">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007481">
        <property type="entry name" value="SspB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036760">
        <property type="entry name" value="SspB-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04386">
        <property type="entry name" value="SspB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101738">
        <property type="entry name" value="SSF101738"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="139"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="139"/>
            <end position="174"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68086.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="191" mass="21206" checksum="BC104E2CCAD37CF4" modified="2015-12-09" version="1">MSEDLLRYDILIQDALRGAVKKILAEVGRTGLPGDHHFYIAFETTAPGVKISQRLKERYPQEMTIVLQHQFWDLAIGEHAFEVGLSFGGVPEKLLVPFSAIKGFFDPSVQFALEFDPGKTAEELPEDLLEAVEELAKAEQETTEKLMTADNKQDDVPAVEAEKKTKKPDQDTEDGDGGGEVVSLDAFRKKT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1C7</accession>
    <name>A0A0M7A1C7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Sensory histidine kinase AtoS</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01623</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68070.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671396.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01623"/>
    <dbReference type="EnsemblBacteria" id="CTQ68070">
        <property type="protein sequence ID" value="CTQ68070"/>
        <property type="gene ID" value="LAX5112_01623"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004222">
        <property type="term" value="F:metalloendopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071586">
        <property type="term" value="P:CAAX-box protein processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00130">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000014">
        <property type="entry name" value="PAS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035965">
        <property type="entry name" value="PAS-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013656">
        <property type="entry name" value="PAS_4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003675">
        <property type="entry name" value="Rce1-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08448">
        <property type="entry name" value="PAS_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02517">
        <property type="entry name" value="Rce1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00091">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55785">
        <property type="entry name" value="SSF55785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00229">
        <property type="entry name" value="sensory_box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50112">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0418">Kinase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="136"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="160"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="202"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="254"/>
            <end position="273"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="285"/>
            <end position="308"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="314"/>
            <end position="332"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="341"/>
            <end position="361"/>
        </location>
    </feature>
    <feature type="domain" description="PAS" evidence="2">
        <location>
            <begin position="1"/>
            <end position="69"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50112"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ68070.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="364" mass="40049" checksum="3BCAA2E1E15009CD" modified="2015-12-09" version="1">MTDDIVASSRDGIITIDPHGVLTSFNPGAEAIFGLSATEVVGLTVAEVFLPLEDLDAFTDCVLEAVRQPDKEHVATISLERPEGILHLSVRTVLLHRKGSDERIGVLVMLADESERVELLTRTADRERERAATGRFIVAILTIFSVFTLLLEPIQKLARAHFYDLGPVIALLTLVIIAFFLDRWSSPESRTLKLNLRPERRYLVESIVWSLGFCVLMTFGKLIFILLAREDGATPPELFSFLVLDDGTRVREPGLFLIALAIYLVSVLFQQFAIRCAIQAPLQSFLTGVIGPAGWVANLVSTLLFAVLHAHLNPLVSLAVIVPSLLWGWLFMRSGSVVPSIISHAIIGVYAIFILGIFAGLDQV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1M8</accession>
    <name>A0A0M7A1M8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 6 7">50S ribosomal protein L10</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6 8" type="primary">rplJ</name>
        <name evidence="8" type="ORF">LAX5112_01715</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 6">Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Part of the ribosomal stalk of the 50S ribosomal subunit. The N-terminus interacts with L11 and the large rRNA to form the base of the stalk. The C-terminus forms an elongated spine to which L12 dimers bind in a sequential fashion forming a multimeric L10(L12)X complex.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the universal ribosomal protein uL10 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68372.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008191021.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01715"/>
    <dbReference type="EnsemblBacteria" id="CTQ68372">
        <property type="protein sequence ID" value="CTQ68372"/>
        <property type="gene ID" value="LAX5112_01715"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015934">
        <property type="term" value="C:large ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070180">
        <property type="term" value="F:large ribosomal subunit rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd05797">
        <property type="entry name" value="Ribosomal_L10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1730">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00362">
        <property type="entry name" value="Ribosomal_L10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022973">
        <property type="entry name" value="Ribosomal_L10"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043141">
        <property type="entry name" value="Ribosomal_L10-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002363">
        <property type="entry name" value="Ribosomal_L10_eubac_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001790">
        <property type="entry name" value="Ribosomal_L10P"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11560">
        <property type="entry name" value="PTHR11560"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00466">
        <property type="entry name" value="Ribosomal_L10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF160369">
        <property type="entry name" value="SSF160369"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01109">
        <property type="entry name" value="RIBOSOMAL_L10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 6" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="4 6 8" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="6" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="6" id="KW-0699">rRNA-binding</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002633"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008889"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00021186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00362"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003636"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ68372.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="172" mass="17972" checksum="C7533C09FEAAC962" modified="2015-12-09" version="1">MERAEKQEFVTSFNAELADTGVVVVAHYAGLSVAQMTALRSSVREAGGSVKVAKNRLVKLALKGTDLEHISDLLQGPTVLVYSDDPVAAPKAAVDFAKANTQLEILGGALGTTNLNPEGVKSLATMPSLDELRAKLVGMIQTPGTRIAQVVNAPAGQLARVFGAYAKKDEAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A293</accession>
    <name>A0A0M7A293_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">D-malate degradation protein R</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">dmlR_3</name>
        <name evidence="3" type="ORF">LAX5112_01533</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67823.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01533"/>
    <dbReference type="EnsemblBacteria" id="CTQ67823">
        <property type="protein sequence ID" value="CTQ67823"/>
        <property type="gene ID" value="LAX5112_01533"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="13"/>
            <end position="70"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ67823.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="319" mass="35279" checksum="83FB5FA108FD99C3" modified="2015-12-09" version="1">MPIIDNLNSENEIMLDDIALFVHVAQARSLTGAGAVLGLPAATVTRRLQRLEDKLGHQLVHRSARKFGLTSEGEAYFQAFAGIVEQAEVTARNLSAEMHELSGPLVVAAPTNISVGALQPMWTAFMRRHPGIRLDLRLSNFNIDLLEDRIDLALRIGPQQDQRLYQKKMGSISTAVMAAPSYLEGCNMPEGPNDLGRHSIIAVRTIPAWRLSHKLTGSTCVLHLKGDVIVDDIALVRQFAEDGFGVCLLSVTEAAEPLEQGRLKLLLPDWQGQQRDIYAVWPTGKLLSARAKCLREFMRIYLAERPVFQGQLPTESTLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2M4</accession>
    <name>A0A0M7A2M4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin)</fullName>
            <ecNumber evidence="6">1.17.7.3</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6 7" type="primary">ispG</name>
        <name evidence="7" type="ORF">LAX5112_01990</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>(2E)-4-hydroxy-3-methylbut-2-enyl diphosphate + 2 H(+) + H2O + oxidized [flavodoxin] = 2-C-methyl-D-erythritol 2,4-cyclic diphosphate + reduced [flavodoxin]</text>
            <dbReference type="Rhea" id="RHEA:43604"/>
            <dbReference type="Rhea" id="RHEA-COMP:10622"/>
            <dbReference type="Rhea" id="RHEA-COMP:10623"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57618"/>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
            <dbReference type="ChEBI" id="CHEBI:58483"/>
            <dbReference type="ChEBI" id="CHEBI:128753"/>
            <dbReference type="EC" id="1.17.7.3"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
        <text evidence="6">Binds 1 [4Fe-4S] cluster.</text>
    </comment>
    <comment type="pathway">
        <text evidence="6">Isoprenoid biosynthesis; isopentenyl diphosphate biosynthesis via DXP pathway; isopentenyl diphosphate from 1-deoxy-D-xylulose 5-phosphate: step 5/6.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the IspG family.</text>
    </comment>
    <dbReference type="EC" id="1.17.7.3" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69119.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671693.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01990"/>
    <dbReference type="EnsemblBacteria" id="CTQ69119">
        <property type="protein sequence ID" value="CTQ69119"/>
        <property type="gene ID" value="LAX5112_01990"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00056">
        <property type="reaction ID" value="UER00096"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046429">
        <property type="term" value="F:4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019288">
        <property type="term" value="P:isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016114">
        <property type="term" value="P:terpenoid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.413.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00159">
        <property type="entry name" value="IspG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011005">
        <property type="entry name" value="Dihydropteroate_synth-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016425">
        <property type="entry name" value="IspG_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004588">
        <property type="entry name" value="IspG_bac-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045854">
        <property type="entry name" value="NO2/SO3_Rdtase_4Fe4S_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30454">
        <property type="entry name" value="PTHR30454"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04551">
        <property type="entry name" value="GcpE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004640">
        <property type="entry name" value="IspG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56014">
        <property type="entry name" value="SSF56014"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00612">
        <property type="entry name" value="ispG_gcpE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 6" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="3 6" id="KW-0408">Iron</keyword>
    <keyword evidence="4 6" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="5 6" id="KW-0414">Isoprene biosynthesis</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2 6 7" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="binding site" evidence="6">
        <location>
            <position position="303"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="306"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="349"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="356"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00159"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ69119.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="419" mass="44756" checksum="2C8D6A0FF0E76B59" modified="2015-12-09" version="1">MIDDFATPLPRRKSVGVKVGSVMVGGGAPVVVQSMTNTDTADADSTVAQVSALARAGSEVVRITVDRAEAAAQVPHIKERLDRIGVDVPLVGDFHYIGHKLLTDYPDCAAALDKYRINPGNVGFKAKRDTQFSQIIDIAQKHDKPVRIGVNWGSLDQELLTKLMDENAESASPVSANAVMREAIIQSALLSAERAENLGMGRDKILLSAKVSQVQDLIAVYSDLARRCDYALHLGLTEAGMGTKGIVSSAASMGILLQQGIGDTIRVSLTPEPGGDRTREVQVAQELLQVMGFRAFVPVVAACPGCGRTTSTVFQELAQDIQDHIRVSMPKWREQYPGVESLNVAVMGCIVNGPGESKHADIGISLPGTGETPSAPVFIDGEKATTLRGEGIADEFKQMVLEYIEKRYGDGKTTSTDAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2W5</accession>
    <name>A0A0M7A2W5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative metal-binding integral membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02102</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69405.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02102"/>
    <dbReference type="EnsemblBacteria" id="CTQ69405">
        <property type="protein sequence ID" value="CTQ69405"/>
        <property type="gene ID" value="LAX5112_02102"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018688">
        <property type="entry name" value="DUF2182_TM_metal-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09948">
        <property type="entry name" value="DUF2182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="62"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="97"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="196"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="237"/>
            <end position="259"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69405.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="262" mass="28049" checksum="C9F8F1F06360174F" modified="2015-12-09" version="1">MQIALHLVDRRQAAWIAFFAAVLGAWTALFLMQPDLDLPAGWQALGLDYLASLCRPAADASLAGLIAMWGLMSLAMMAPTIAPALKTYLDLTHTQGATIAGFSALLAGYLLVWIGFSVPAAVLQAALDTQGWLDPFGRSSEVYLTAGILALAGAYQFSRLKEACLNQCQSPLIFFMGQWQDGLSGSFRMGLHLGSICLGCCWALMLLAFVAGTMNLAFMGLAMVLMTFEKLPQLGRYLTVPVGFALLGSAAAILIIELIKHL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3L9</accession>
    <name>A0A0M7A3L9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">YGGT family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02026</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the YggT family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69217.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451160.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02026"/>
    <dbReference type="EnsemblBacteria" id="CTQ69217">
        <property type="protein sequence ID" value="CTQ69217"/>
        <property type="gene ID" value="LAX5112_02026"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003425">
        <property type="entry name" value="CCB3/YggT"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02325">
        <property type="entry name" value="YGGT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="6"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="66"/>
            <end position="87"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010894"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ69217.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="98" mass="11085" checksum="A1ADFF157EA3646E" modified="2015-12-09" version="1">MTALFTVILIALQLYTYVVIASAIFSWLYAFNIVNPKNQIIGMIGQVLYNLTEPVLRPIRRFMPDLGGVDISPVVLLLGIIFIQMIIQNNLMPMFRGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3T7</accession>
    <name>A0A0M7A3T7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 8">Elongation factor G</fullName>
            <shortName evidence="8">EF-G</shortName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">fusA_1</name>
        <name evidence="8" type="synonym">fusA</name>
        <name evidence="10" type="ORF">LAX5112_01723</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7 8">Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 8">Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68393.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008195163.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01723"/>
    <dbReference type="EnsemblBacteria" id="CTQ68393">
        <property type="protein sequence ID" value="CTQ68393"/>
        <property type="gene ID" value="LAX5112_01723"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003746">
        <property type="term" value="F:translation elongation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd16262">
        <property type="entry name" value="EFG_III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01434">
        <property type="entry name" value="EFG_mtEFG1_IV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd03713">
        <property type="entry name" value="EFG_mtEFG_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00054_B">
        <property type="entry name" value="EF_G_EF_2_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041095">
        <property type="entry name" value="EFG_II"/>
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    </dbReference>
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        <property type="entry name" value="Ribosomal_S5_D2-typ_fold"/>
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        <property type="entry name" value="Ribosomal_S5_D2-typ_fold_subgr"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="GTP_EFTU"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="GTP_EFTU_D2"/>
        <property type="match status" value="1"/>
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        <property type="match status" value="1"/>
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        <property type="match status" value="1"/>
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        <property type="match status" value="1"/>
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        <property type="match status" value="2"/>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="small_GTP"/>
        <property type="match status" value="1"/>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="G_TR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 8 10" id="KW-0251">Elongation factor</keyword>
    <keyword evidence="6 8" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="3 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5 8" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tr-type G" evidence="9">
        <location>
            <begin position="8"/>
            <end position="283"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="17"/>
            <end position="24"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
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        <location>
            <begin position="81"/>
            <end position="85"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
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        <location>
            <begin position="135"/>
            <end position="138"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
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        <source>
            <dbReference type="ARBA" id="ARBA00005870"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00017872"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022768"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00024731"/>
        </source>
    </evidence>
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        <source>
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        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51722"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="EMBL" id="CTQ68393.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="691" mass="75990" checksum="1F9189456182F8F6" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A449</accession>
    <name>A0A0M7A449_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Chorismate mutase</fullName>
            <ecNumber evidence="1">5.4.99.5</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">tyrA</name>
        <name evidence="3" type="ORF">LAX5112_02048</name>
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        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
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            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="5.4.99.5" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000007">
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        <property type="molecule type" value="Genomic_DNA"/>
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    </dbReference>
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        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
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        <property type="term" value="F:chorismate mutase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
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        <property type="term" value="P:chorismate metabolic process"/>
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        <property type="project" value="InterPro"/>
    </dbReference>
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    </dbReference>
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    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
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        <location>
            <begin position="11"/>
            <end position="102"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
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        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51168"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ69262.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="107" mass="11770" checksum="FC9BFF7178F26F29" modified="2015-12-09" version="1">MSQAEIQLGQSAALDELTSLRGSIDNIDAALIHMLAERFKCTQKVGVLKATNDLPPADPAREKIQIERLRKLAADANLDPDFAEKFLNFIVHEVIRHHEAIAAEAGN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4Q1</accession>
    <name>A0A0M7A4Q1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Ferredoxin</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">fdxA</name>
        <name evidence="10" type="ORF">LAX5112_02168</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
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        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 7">
            <name>[3Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:21137"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 7">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69571.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02168"/>
    <dbReference type="EnsemblBacteria" id="CTQ69571">
        <property type="protein sequence ID" value="CTQ69571"/>
        <property type="gene ID" value="LAX5112_02168"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051538">
        <property type="term" value="F:3 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
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        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="entry name" value="4Fe4S_Fe-S-bd"/>
    </dbReference>
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    </dbReference>
    <dbReference type="InterPro" id="IPR000813">
        <property type="entry name" value="7Fe_ferredoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022569">
        <property type="entry name" value="Fd_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11953">
        <property type="entry name" value="DUF3470"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00037">
        <property type="entry name" value="Fer4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00354">
        <property type="entry name" value="7FE8SFRDOXIN"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00198">
        <property type="entry name" value="4FE4S_FER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51379">
        <property type="entry name" value="4FE4S_FER_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6 7" id="KW-0003">3Fe-4S</keyword>
    <keyword evidence="7" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="7" id="KW-0249">Electron transport</keyword>
    <keyword evidence="4 7" id="KW-0408">Iron</keyword>
    <keyword evidence="5 7" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="3 7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0677">Repeat</keyword>
    <keyword evidence="7" id="KW-0813">Transport</keyword>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="9">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="9">
        <location>
            <begin position="31"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="78"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="78"/>
            <end position="99"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023291"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU364098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51379"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ69571.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="110" mass="12521" checksum="153636D2ED487E3C" modified="2015-12-09" version="1">MTYVVTDNCIKCKYTDCVEVCPVDCFYEGENFLVINPDECIDCGVCEPECPAEAILPDTEPGLEKWIEINAEYSEKWPNITEKKDPMPDADKFDGQENKLEKYFSPNPPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4V1</accession>
    <name>A0A0M7A4V1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01826</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68654.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ68654">
        <property type="protein sequence ID" value="CTQ68654"/>
        <property type="gene ID" value="LAX5112_01826"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809130" evidence="2">
        <location>
            <begin position="20"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="162"/>
            <end position="181"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ68654.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="181" mass="19526" checksum="4C9FBC5941559979" modified="2015-12-09" version="1">MRLFLSLVLIWMLSGTALADTMQPLGRFHVINTAGFIERDGNRAPLASDLETGELTLYRNVVGNLVLTISETDIELFEVENGLAGLTWNSGDSSLLEAADILDLSPHTLPEQVQAWGADVTWPGQGEVQLVLLPLGENAYSSFLISHPGSSTVVRQMELRKVSGPPNRPAPKATVPAPVLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4Z3</accession>
    <name>A0A0M7A4Z3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Degradation activator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">degA_2</name>
        <name evidence="6" type="ORF">LAX5112_02202</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69661.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671841.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02202"/>
    <dbReference type="EnsemblBacteria" id="CTQ69661">
        <property type="protein sequence ID" value="CTQ69661"/>
        <property type="gene ID" value="LAX5112_02202"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01392">
        <property type="entry name" value="HTH_LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000843">
        <property type="entry name" value="HTH_LacI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046335">
        <property type="entry name" value="LacI/GalR-like_sensor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00356">
        <property type="entry name" value="LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13377">
        <property type="entry name" value="Peripla_BP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00354">
        <property type="entry name" value="HTH_LACI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50932">
        <property type="entry name" value="HTH_LACI_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH lacI-type" evidence="5">
        <location>
            <begin position="6"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="318"/>
            <end position="354"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ69661.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="354" mass="37672" checksum="70DEB9401336968E" modified="2015-12-09" version="1">MRTRPPTIKDVAEQAGCGIATVSRVLNGTGSASMETRRKVLSAADALGFEFSALGRSLQSSSTKTIGCIVPSLANPIFAEVVQAAQHEAHREGYQLILACSEYDEVLEFQAVRTLIAKKVDGLVLTVNNAAGSKALELIGDRQLPCCLVYNRPSFGLPSWAVDNRAAAREVAGAFRSHGHVQTGFLALRFNRSDRARERYEGFAEACSEIGMAKPVLLEIEEQEGHLLELLGALLSGHQDLTGIFASNDFLALAAMKAARTLGKRIPDDLSLVGFDGISTGLLVDPRLATIETHPHTMGRGAINSVLAKLLDRPMPDQPAPATTFRFRTGGSLGPPGAGKADGREAATSLPSNE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4Z5</accession>
    <name>A0A0M7A4Z5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">DNA polymerase IV</fullName>
            <shortName evidence="5">Pol IV</shortName>
            <ecNumber evidence="5">2.7.7.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 7" type="primary">dinB</name>
        <name evidence="7" type="ORF">LAX5112_01849</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4 5">Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>a 2'-deoxyribonucleoside 5'-triphosphate + DNA(n) = diphosphate + DNA(n+1)</text>
            <dbReference type="Rhea" id="RHEA:22508"/>
            <dbReference type="Rhea" id="RHEA-COMP:17339"/>
            <dbReference type="Rhea" id="RHEA-COMP:17340"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:61560"/>
            <dbReference type="ChEBI" id="CHEBI:173112"/>
            <dbReference type="EC" id="2.7.7.7"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="5">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="5">Binds 2 magnesium ions per subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2 5">Monomer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the DNA polymerase type-Y family.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.7" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68694.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01849"/>
    <dbReference type="EnsemblBacteria" id="CTQ68694">
        <property type="protein sequence ID" value="CTQ68694"/>
        <property type="gene ID" value="LAX5112_01849"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003684">
        <property type="term" value="F:damaged DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003887">
        <property type="term" value="F:DNA-directed DNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006261">
        <property type="term" value="P:DNA-templated DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009432">
        <property type="term" value="P:SOS response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="CDD" id="cd03586">
        <property type="entry name" value="PolY_Pol_IV_kappa"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1490.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01113">
        <property type="entry name" value="DNApol_IV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043502">
        <property type="entry name" value="DNA/RNA_pol_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036775">
        <property type="entry name" value="DNA_pol_Y-fam_lit_finger_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017961">
        <property type="entry name" value="DNA_pol_Y-fam_little_finger"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022880">
        <property type="entry name" value="DNApol_IV"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001126">
        <property type="entry name" value="UmuC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00817">
        <property type="entry name" value="IMS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11799">
        <property type="entry name" value="IMS_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100879">
        <property type="entry name" value="SSF100879"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56672">
        <property type="entry name" value="SSF56672"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50173">
        <property type="entry name" value="UMUC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5" id="KW-0227">DNA damage</keyword>
    <keyword evidence="5" id="KW-0234">DNA repair</keyword>
    <keyword evidence="5" id="KW-0235">DNA replication</keyword>
    <keyword evidence="5" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0239">DNA-directed DNA polymerase</keyword>
    <keyword evidence="5" id="KW-0460">Magnesium</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-0515">Mutator protein</keyword>
    <keyword evidence="5 7" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="UmuC" evidence="6">
        <location>
            <begin position="4"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="active site" evidence="5">
        <location>
            <position position="102"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="8"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="101"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="site" description="Substrate discrimination" evidence="5">
        <location>
            <position position="13"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010945"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011245"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00024632"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00025589"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01113"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50173"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ68694.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="394" mass="42950" checksum="C9E57B4070F8611C" modified="2015-12-09" version="1">MLSIAHIDCDAFYASVEKRDNPELQDKPVIIGGGQRGVVSTCCYIARISGVRSAMPMFKAMEACPEAVVIKPNMEKYSRVGKEIRSRMQALTPLVEPLSIDEAFLDLTGTERLHHASAAETLAKFIRDIEADIGISASVGLAPNKFLAKLASDLEKPRGFSVIGAAEAEQRLAPMPVGKIWGVGKVFQTKLDRDGIRTIGQLQTMDANTLARRYGSIGLRLAHLSHGDDSRDVTPSRGAKSVSTETTFRTDISDFHVLKPILRDLSEKVSFRLKKSELAGRGITLKLKTSEFKTITRTRHLTDPTQLADKIFEAGVALLEAETDGRRFRLIGIGVNDISDASQADPEDLLDATSGRKKKAELAIDKLRGKFGNSAVELGLTHAAKQARKAAEDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5P1</accession>
    <name>A0A0M7A5P1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02494</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70398.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70398">
        <property type="protein sequence ID" value="CTQ70398"/>
        <property type="gene ID" value="LAX5112_02494"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="27"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70398.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="44" mass="4760" checksum="ED6480A78590E7F1" modified="2015-12-09" version="1">MQTSLYFGLALGATSLVALSAILWFYAGERVYVDRLISAIAGCF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A671</accession>
    <name>A0A0M7A671_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">NADPH-dependent curcumin reductase</fullName>
            <ecNumber evidence="2">1.3.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">curA</name>
        <name evidence="2" type="ORF">LAX5112_02302</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.3.1.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ69962.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671937.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02302"/>
    <dbReference type="EnsemblBacteria" id="CTQ69962">
        <property type="protein sequence ID" value="CTQ69962"/>
        <property type="gene ID" value="LAX5112_02302"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016628">
        <property type="term" value="F:oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013149">
        <property type="entry name" value="ADH-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041694">
        <property type="entry name" value="ADH_N_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011032">
        <property type="entry name" value="GroES-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045010">
        <property type="entry name" value="MDR_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020843">
        <property type="entry name" value="PKS_ER"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43205">
        <property type="entry name" value="PTHR43205"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16884">
        <property type="entry name" value="ADH_N_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00107">
        <property type="entry name" value="ADH_zinc_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00829">
        <property type="entry name" value="PKS_ER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50129">
        <property type="entry name" value="SSF50129"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PKS_ER" evidence="1">
        <location>
            <begin position="14"/>
            <end position="328"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69962.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="333" mass="36236" checksum="AC6D2010314ABCB1" modified="2015-12-09" version="1">MQNLRLTLKSRPEGKLGSEHFDRVEEDMGPLADGKARVRVVYVSLDPAMRGWVSPDTKSYIPPVQLGETMRSLGVGIVEESKSDGYKVGDWVSGTPGWTKYVDVAPGEISVVPQMDRIEHYMGVLGLPGVTAYQGLVIEGQPKEGETLCVTGAAGSVGSLVGQIGKALGLRVIGIAGTQEKCDWLTKELGFDAALNYKTDDLSKGLAEFAPDGINLHFENVGGAPFKAAFRNMAAHGRMIFCGFISAYNGDIDPDPLDMTTIIRRRLMLKGFTMPDHYASYPMLFSELGKLMMQGKLKYRLHVEEGLENAPVVFNKLFDGSNTGKLVVKVSDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6S7</accession>
    <name>A0A0M7A6S7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcriptional activator NphR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">nphR_1</name>
        <name evidence="2" type="ORF">LAX5112_02604</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70768.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02604"/>
    <dbReference type="EnsemblBacteria" id="CTQ70768">
        <property type="protein sequence ID" value="CTQ70768"/>
        <property type="gene ID" value="LAX5112_02604"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035418">
        <property type="entry name" value="AraC-bd_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14525">
        <property type="entry name" value="AraC_binding_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="1">
        <location>
            <begin position="229"/>
            <end position="329"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70768.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="333" mass="37699" checksum="BD6F559A876F44E5" modified="2015-12-09" version="1">MMAQLQRPPPLSDFRRFQTFDVDAARDIVARHFCSHKLERQSSDDRFDACQHRVSGEHVSLNYLRYGGDVTIEPGELTRFFLIQIPLAGAADVTNGCQAVASNSQTASILNPDRHTVMRWHSGCEQLLVQIDRQFVDEVASRVTGMDLGARLRFASEFLLKRPEARQWMRKLWGLVRAAENGELFGSGNSPRQNRLEEELIVSLLGVQENTASALLSRETSQSGSAILKRAVDMIRDRMREDISLIELARHAGTTPRNLQLVFKREMDLTPVQYLQQCRLNLARHILLARNGEISVSDVAELSGHRHLGRFSLAYKKRFGESPKATARSRVFC</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6Z7</accession>
    <name>A0A0M7A6Z7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02629</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70848.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70848">
        <property type="protein sequence ID" value="CTQ70848"/>
        <property type="gene ID" value="LAX5112_02629"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ70848.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="105" mass="11755" checksum="1075CA9B6B321D04" modified="2015-12-09" version="1">MQIAPYLNRVPAIILTANKLIKTFLPREALQLRTGLKTMTIATTTSTRASGGFMRRAFDRMIEARSVQARRYVNGYLLSLDDATLSAHGYDREQLEREGSATSAF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A733</accession>
    <name>A0A0M7A733_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02669</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70965.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672234.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70965">
        <property type="protein sequence ID" value="CTQ70965"/>
        <property type="gene ID" value="LAX5112_02669"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="106"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="151"/>
            <end position="219"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="158"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="195"/>
            <end position="212"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70965.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="219" mass="24252" checksum="44A944C51D3C6274" modified="2015-12-09" version="1">MTVHLITAYREIDDLLLECLVNWAEVAEQVRGSFTEPEVHIEFAQRSTYLVEARASVEAALRALDGVNNQIASEAGASIQVSDAANGRSQDHGQCGCVDPGFPVGADHSLPADVSSSRPDRPQRPQEHCRGQIRDWNRDILACRHQKIWGAGNADRSDPASGRSSAQRIASIREQMVSRLLDREPPPPEWEQQTSEPSDEIKEPENGPQTKSSRPRRRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A783</accession>
    <name>A0A0M7A783_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Carnitine catabolism transcriptional activator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">cdhR_5</name>
        <name evidence="3" type="ORF">LAX5112_02457</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70302.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672054.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70302">
        <property type="protein sequence ID" value="CTQ70302"/>
        <property type="gene ID" value="LAX5112_02457"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002818">
        <property type="entry name" value="DJ-1/PfpI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018062">
        <property type="entry name" value="HTH_AraC-typ_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01965">
        <property type="entry name" value="DJ-1_PfpI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="SSF52317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00041">
        <property type="entry name" value="HTH_ARAC_FAMILY_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="2">
        <location>
            <begin position="240"/>
            <end position="338"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ70302.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="345" mass="38200" checksum="95D268492E584F61" modified="2015-12-09" version="1">MPQLDDNREAILQTAELSGAAPAASGVTSICFLLLDNFSLLSFSSAIEPLRIANKIMKRKAFEYVCCTLDGNDALASSGGIMRADCALDDVKSSDLLAICSSDDVELNSLSPAHKNRIRRFAHQKTRIAGICTGAYVLADLGLLEGRQCTIHWEYADLFKERFPKAKLIDSLIQTDDHYLTCAGGTTALDLMIGYIADLHGGAVASDVASIALHQDMRSGSERQNTLMRDELYLIPPRLRRCIELMTENVGETLSQNELAARLNVSPRQLQRDFQHYFECSPLAYYSKIRLDIAQRLVCRTAMPIIEIAVACGFANASHFAKRYKSLHGKSPIEDRQAKGRPRQQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A791</accession>
    <name>A0A0M7A791_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">tRNA-modifying protein YgfZ</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">ygfZ</name>
        <name evidence="4" type="ORF">LAX5112_02462</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70312.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672138.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02462"/>
    <dbReference type="EnsemblBacteria" id="CTQ70312">
        <property type="protein sequence ID" value="CTQ70312"/>
        <property type="gene ID" value="LAX5112_02462"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1360.120">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006222">
        <property type="entry name" value="GCV_T_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027266">
        <property type="entry name" value="TrmE/GcvT_dom1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045179">
        <property type="entry name" value="YgfZ/GcvT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017703">
        <property type="entry name" value="YgfZ/GcvT_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22602">
        <property type="entry name" value="PTHR22602"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01571">
        <property type="entry name" value="GCV_T"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03317">
        <property type="entry name" value="ygfZ_signature"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0809">Transit peptide</keyword>
    <feature type="domain" description="GCV_T" evidence="3">
        <location>
            <begin position="15"/>
            <end position="109"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01571"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ70312.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="296" mass="31566" checksum="BD83788FDC8E9257" modified="2015-12-09" version="1">MSSPNIAPLHDRALIRVSGPDAEHFLQNLVTADIDELADPGATLSALLTPQGKILFDFLIYKQNSGYLIDAPKETSADLLKRLTFYRLRAKVDLEAAGEDVCVFALWGGDLSDTNGAELVVTDPRLAALGQRVVGPTGFADASAATVKDLEAYDAHRVALGVPEGLKDFAYSDIFPHDADMDQLGGVSFKKGCYVGQEVVSRVHHRGTARKRFIQIEAAGALPEKGTSVIANDKSVGELGSSTMIDGQAVGVALLRLDKVHQAIENGVPLTCGDVAITVKLPDWAEFGWPDAKAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7J8</accession>
    <name>A0A0M7A7J8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">ATP synthase subunit c</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10">ATP synthase F(0) sector subunit c</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="10">F-type ATPase subunit c</fullName>
            <shortName evidence="10">F-ATPase subunit c</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="10">Lipid-binding protein</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="10 12" type="primary">atpE</name>
        <name evidence="12" type="ORF">LAX5112_02411</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.</text>
    </comment>
    <comment type="function">
        <text evidence="10">Key component of the F(0) channel; it plays a direct role in translocation across the membrane. A homomeric c-ring of between 10-14 subunits forms the central stalk rotor element with the F(1) delta and epsilon subunits.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="10">Cell membrane</location>
            <topology evidence="10">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 10">Belongs to the ATPase C chain family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70210.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008191441.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02411"/>
    <dbReference type="EnsemblBacteria" id="CTQ70210">
        <property type="protein sequence ID" value="CTQ70210"/>
        <property type="gene ID" value="LAX5112_02411"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045263">
        <property type="term" value="C:proton-transporting ATP synthase complex, coupling factor F(o)"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008289">
        <property type="term" value="F:lipid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046933">
        <property type="term" value="F:proton-transporting ATP synthase activity, rotational mechanism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01396">
        <property type="entry name" value="ATP_synth_c_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000454">
        <property type="entry name" value="ATP_synth_F0_csu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038662">
        <property type="entry name" value="ATP_synth_F0_csu_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002379">
        <property type="entry name" value="ATPase_proteolipid_c-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035921">
        <property type="entry name" value="F/V-ATP_Csub_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10031">
        <property type="entry name" value="PTHR10031"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00137">
        <property type="entry name" value="ATP-synt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00124">
        <property type="entry name" value="ATPASEC"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81333">
        <property type="entry name" value="SSF81333"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0066">ATP synthesis</keyword>
    <keyword evidence="10" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="3 10" id="KW-0138">CF(0)</keyword>
    <keyword evidence="5 10" id="KW-0375">Hydrogen ion transport</keyword>
    <keyword evidence="7 10" id="KW-0406">Ion transport</keyword>
    <keyword evidence="8 10" id="KW-0446">Lipid-binding</keyword>
    <keyword evidence="9 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 10" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="10" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="6"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="50"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="domain" description="ATP-synt_C" evidence="11">
        <location>
            <begin position="9"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="site" description="Reversibly protonated during proton transport" evidence="10">
        <location>
            <position position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006704"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022547"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022781"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023121"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01396"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF00137"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ70210.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="75" mass="7579" checksum="716B73B627F2E1F8" modified="2015-12-09" version="1">MEAEAAKYIGAGIACLGMGGAAIALGTIFGNYLNGALRNPTAADGQFGRLVFGFAVTEALGIFSLLIALLLLFAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8M7</accession>
    <name>A0A0M7A8M7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Killing trait</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02671</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70971.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040450837.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70971">
        <property type="protein sequence ID" value="CTQ70971"/>
        <property type="gene ID" value="LAX5112_02671"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021070">
        <property type="entry name" value="Killing_trait_RebB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11747">
        <property type="entry name" value="RebB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ70971.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="109" mass="11176" checksum="4D8E57D14965F2A3" modified="2015-12-09" version="1">MADPVTVNPMVTDAVTQSNVKVVGEAPAMAISTLYQSMAHSTGILFENAVAAQQQQNILAQAAANQGVMQIYSMDTMAGAGATEKVGQTGVADNLTGLMTVLQAFSGGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9Y9</accession>
    <name>A0A0M7A9Y9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Hydroxyneurosporene synthase (CrtC)</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02972</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71918.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02972"/>
    <dbReference type="EnsemblBacteria" id="CTQ71918">
        <property type="protein sequence ID" value="CTQ71918"/>
        <property type="gene ID" value="LAX5112_02972"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ71918.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="245" mass="28057" checksum="29CFF3B45D2B3118" modified="2015-12-09" version="1">MTERGEGELVRTQNSMQIGSSSIVYVDGGIEIVFDETALPWPGHRLMPSRMSGRIRLEPQIQNDRVFDLDPEGHHIWWPVFPRARVRVESNHLPKGGWQGEAYHDFNFGDRVLEEDFEHWDWARGPSGDQATIILYDAVLRSGTRRTLGVVFSKETEERHFAPPERQMLPVGSWGVKGGIACDPGGTPRLSMKLEDAPFYRRSLVETMVHGDQLAMVHETLDCNRLANPVVRMMLPFRMPRRARR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AA06</accession>
    <name>A0A0M7AA06_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1 2">Protein ApaG</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">apaG</name>
        <name evidence="4" type="ORF">LAX5112_02993</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71975.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02993"/>
    <dbReference type="EnsemblBacteria" id="CTQ71975">
        <property type="protein sequence ID" value="CTQ71975"/>
        <property type="gene ID" value="LAX5112_02993"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1470">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00791">
        <property type="entry name" value="ApaG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007474">
        <property type="entry name" value="ApaG_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036767">
        <property type="entry name" value="ApaG_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023065">
        <property type="entry name" value="Uncharacterised_ApaG"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04379">
        <property type="entry name" value="DUF525"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF110069">
        <property type="entry name" value="SSF110069"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51087">
        <property type="entry name" value="APAG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ApaG" evidence="3">
        <location>
            <begin position="6"/>
            <end position="130"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00017693"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00791"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51087"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ71975.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="133" mass="14910" checksum="2ECC45C21A0FCC9A" modified="2015-12-09" version="1">MSGSYRAITDNIEVSVEPYYLDDESKPEDQEFIWAYLVEIHNGGDKPVQLKSRYWMITDALGRLEEVRGEGVVGEQPVIEPGETYEYSSYCPLATDSGIMAGSYEMARPDGTTFQVEVPAFSLDLPDTIRSLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAB5</accession>
    <name>A0A0M7AAB5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Aconitate hydratase 2</fullName>
            <ecNumber evidence="11">4.2.1.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">acnB</name>
        <name evidence="11" type="ORF">LAX5112_02933</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <dbReference type="EC" id="4.2.1.3" evidence="11"/>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71799.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02933"/>
    <dbReference type="EnsemblBacteria" id="CTQ71799">
        <property type="protein sequence ID" value="CTQ71799"/>
        <property type="gene ID" value="LAX5112_02933"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003994">
        <property type="term" value="F:aconitate hydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047780">
        <property type="term" value="F:citrate dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006099">
        <property type="term" value="P:tricarboxylic acid cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.310">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.19.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.499.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1060.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015931">
        <property type="entry name" value="Acnase/IPM_dHydase_lsu_aba_1/3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001030">
        <property type="entry name" value="Acoase/IPM_deHydtase_lsu_aba"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015928">
        <property type="entry name" value="Aconitase/3IPM_dehydase_swvl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036008">
        <property type="entry name" value="Aconitase_4Fe-4S_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015933">
        <property type="entry name" value="Aconitase_B_HEAT-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036288">
        <property type="entry name" value="Aconitase_B_HEAT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015929">
        <property type="entry name" value="Aconitase_B_swivel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015932">
        <property type="entry name" value="Aconitase_dom2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00330">
        <property type="entry name" value="Aconitase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06434">
        <property type="entry name" value="Aconitase_2_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11791">
        <property type="entry name" value="Aconitase_B_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53732">
        <property type="entry name" value="SSF53732"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF74778">
        <property type="entry name" value="SSF74778"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="5" id="KW-0408">Iron</keyword>
    <keyword evidence="6" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="7 11" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="Aconitase_B_N" evidence="10">
        <location>
            <begin position="34"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="domain" description="Aconitase_2_N" evidence="9">
        <location>
            <begin position="203"/>
            <end position="435"/>
        </location>
    </feature>
    <feature type="domain" description="Aconitase" evidence="8">
        <location>
            <begin position="439"/>
            <end position="923"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00330"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF06434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF11791"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ71799.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="958" mass="104334" checksum="19DDB90AEF28D31B" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAL1</accession>
    <name>A0A0M7AAL1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Mycofactocin system transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03090</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72185.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008191274.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72185">
        <property type="protein sequence ID" value="CTQ72185"/>
        <property type="gene ID" value="LAX5112_03090"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00440">
        <property type="entry name" value="TetR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50977">
        <property type="entry name" value="HTH_TETR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH tetR-type" evidence="2">
        <location>
            <begin position="2"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="1">
        <location>
            <begin position="25"/>
            <end position="44"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ72185.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="179" mass="20144" checksum="43E76F3CF476DC0C" modified="2015-12-09" version="1">MSDSKDDIAAGLEQVFWSRGFAEPSVPVLRAGVGVSMRTLYRYFPSREAMILGALEFRHQRYMRYVTDGVEEPGLSAAEQLFDKLGGWMRMTEGKECFFRQALAANPDSTDIAETVNRHKSELLTFFGNLSGKMQFASTLYLLHEGVTASYAELGEQAVEDAKRLVRQMFKSANESKYS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAM0</accession>
    <name>A0A0M7AAM0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03075</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72158.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672565.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72158">
        <property type="protein sequence ID" value="CTQ72158"/>
        <property type="gene ID" value="LAX5112_03075"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="58"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="24"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="28"/>
            <end position="47"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ72158.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="76" mass="8421" checksum="6D99C86CAC64023D" modified="2015-12-09" version="1">MSGHTIDNERGAKRAEELRKRFKKVSTASLGGSGSRNPFNMDVGRRSDTSRYNSQSKALAFWLVVALLVMSATLFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABA0</accession>
    <name>A0A0M7ABA0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Pyridoxine 5'-phosphate synthase</fullName>
            <shortName evidence="2">PNP synthase</shortName>
            <ecNumber evidence="2">2.6.99.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2 3" type="primary">pdxJ</name>
        <name evidence="3" type="ORF">LAX5112_02651</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>1-deoxy-D-xylulose 5-phosphate + 3-amino-2-oxopropyl phosphate = H(+) + 2 H2O + phosphate + pyridoxine 5'-phosphate</text>
            <dbReference type="Rhea" id="RHEA:15265"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57279"/>
            <dbReference type="ChEBI" id="CHEBI:57792"/>
            <dbReference type="ChEBI" id="CHEBI:58589"/>
            <dbReference type="EC" id="2.6.99.2"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Cofactor biosynthesis; pyridoxine 5'-phosphate biosynthesis; pyridoxine 5'-phosphate from D-erythrose 4-phosphate: step 5/5.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Homooctamer; tetramer of dimers.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the PNP synthase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.6.99.2" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70914.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672222.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02651"/>
    <dbReference type="EnsemblBacteria" id="CTQ70914">
        <property type="protein sequence ID" value="CTQ70914"/>
        <property type="gene ID" value="LAX5112_02651"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00244">
        <property type="reaction ID" value="UER00313"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033856">
        <property type="term" value="F:pyridoxine 5'-phosphate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008615">
        <property type="term" value="P:pyridoxine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00279">
        <property type="entry name" value="PdxJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004569">
        <property type="entry name" value="PyrdxlP_synth_PdxJ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036130">
        <property type="entry name" value="Pyridoxine-5'_phos_synth"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30456">
        <property type="entry name" value="PTHR30456"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03740">
        <property type="entry name" value="PdxJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63892">
        <property type="entry name" value="SSF63892"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00559">
        <property type="entry name" value="pdxJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="1 2" id="KW-0664">Pyridoxine biosynthesis</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0808">Transferase</keyword>
    <feature type="region of interest" description="3-amino-2-oxopropyl phosphate binding" evidence="2">
        <location>
            <begin position="223"/>
            <end position="224"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="2">
        <location>
            <position position="46"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="2">
        <location>
            <position position="78"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="2">
        <location>
            <position position="200"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="10"/>
        </location>
        <ligand>
            <name>3-amino-2-oxopropyl phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:57279"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="21"/>
        </location>
        <ligand>
            <name>3-amino-2-oxopropyl phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:57279"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="48"/>
        </location>
        <ligand>
            <name>1-deoxy-D-xylulose 5-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:57792"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="53"/>
        </location>
        <ligand>
            <name>1-deoxy-D-xylulose 5-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:57792"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="108"/>
        </location>
        <ligand>
            <name>1-deoxy-D-xylulose 5-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:57792"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="201"/>
        </location>
        <ligand>
            <name>3-amino-2-oxopropyl phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:57279"/>
        </ligand>
    </feature>
    <feature type="site" description="Transition state stabilizer" evidence="2">
        <location>
            <position position="159"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023096"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00279"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ70914.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="249" mass="27201" checksum="C55AEF69B416A1C7" modified="2015-12-09" version="1">MSAVSRLSVNVNAVAMLRNRRDLPWPSVTGLAAIAMEAGAKGITVHPRPDERHIRKTDVFELAELIEERFPNKELCLEGYPSPDFMKLVEEARPEQVLFVPDDPDQTTSDHGWDFSKDIGLLETAIAASKEWAVTVSLFCNPDPADPDHAARIGAERIEIYTGPYGACFDNPDLEAKELDKIAATAEAAQAAGLGVNAGHDLTVENIPALLQRAPFIREMSIGHGFTAEALVYGFAESVKRFRTAMGEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABZ8</accession>
    <name>A0A0M7ABZ8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7 10 14">6-phosphogluconate dehydrogenase, decarboxylating</fullName>
            <ecNumber evidence="6 10 14">1.1.1.44</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="16" type="primary">gndA</name>
        <name evidence="16" type="ORF">LAX5112_03259</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="17" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2 10">Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 10 14">
            <text>6-phospho-D-gluconate + NADP(+) = CO2 + D-ribulose 5-phosphate + NADPH</text>
            <dbReference type="Rhea" id="RHEA:10116"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58121"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="ChEBI" id="CHEBI:58759"/>
            <dbReference type="EC" id="1.1.1.44"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3 10 14">Carbohydrate degradation; pentose phosphate pathway; D-ribulose 5-phosphate from D-glucose 6-phosphate (oxidative stage): step 3/3.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5 10">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4 10 14">Belongs to the 6-phosphogluconate dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.44" evidence="6 10 14"/>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72655.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672678.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03259"/>
    <dbReference type="EnsemblBacteria" id="CTQ72655">
        <property type="protein sequence ID" value="CTQ72655"/>
        <property type="gene ID" value="LAX5112_03259"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00115">
        <property type="reaction ID" value="UER00410"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050661">
        <property type="term" value="F:NADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004616">
        <property type="term" value="F:phosphogluconate dehydrogenase (decarboxylating) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019521">
        <property type="term" value="P:D-gluconate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016054">
        <property type="term" value="P:organic acid catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006098">
        <property type="term" value="P:pentose-phosphate shunt"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1040.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008927">
        <property type="entry name" value="6-PGluconate_DH-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013328">
        <property type="entry name" value="6PGD_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006114">
        <property type="entry name" value="6PGDH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006113">
        <property type="entry name" value="6PGDH_Gnd/GntZ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006115">
        <property type="entry name" value="6PGDH_NADP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006184">
        <property type="entry name" value="6PGdom_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006183">
        <property type="entry name" value="Pgluconate_DH"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11811">
        <property type="entry name" value="PTHR11811"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00393">
        <property type="entry name" value="6PGD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03446">
        <property type="entry name" value="NAD_binding_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000109">
        <property type="entry name" value="6PGD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00076">
        <property type="entry name" value="6PGDHDRGNASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM01350">
        <property type="entry name" value="6PGD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48179">
        <property type="entry name" value="SSF48179"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00873">
        <property type="entry name" value="gnd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00461">
        <property type="entry name" value="6PGD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 14" id="KW-0311">Gluconate utilization</keyword>
    <keyword evidence="10 14" id="KW-0521">NADP</keyword>
    <keyword evidence="10 14 16" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="9 10 14" id="KW-0570">Pentose shunt</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="6PGD" evidence="15">
        <location>
            <begin position="184"/>
            <end position="472"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="12">
        <location>
            <begin position="134"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="12">
        <location>
            <begin position="191"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="11">
        <location>
            <position position="188"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="11">
        <location>
            <position position="195"/>
        </location>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <begin position="14"/>
            <end position="19"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <begin position="37"/>
            <end position="39"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <begin position="80"/>
            <end position="82"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12 13">
        <location>
            <position position="108"/>
        </location>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="196"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="266"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="293"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="449"/>
        </location>
        <ligand>
            <name>substrate</name>
            <note>ligand shared between dimeric partners</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="455"/>
        </location>
        <ligand>
            <name>substrate</name>
            <note>ligand shared between dimeric partners</note>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000530"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00002526"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004874"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00008419"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00013011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00018193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023064"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023126"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRNR" id="PIRNR000109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRSR" id="PIRSR000109-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRSR" id="PIRSR000109-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="PIRSR" id="PIRSR000109-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="RuleBase" id="RU000485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="SMART" id="SM01350"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="CTQ72655.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="474" mass="50366" checksum="A406F614F44CDB81" modified="2015-12-09" version="1">MTTDGAKADIGLIGLGTMGGNLALNIAENGFRISVFNRTLEKTDQFLAKAGALAEKLVPSKTLEDFVASIASPRAIILMVPAGDAVDAQIAALRPLLDADDLIIDAGNANYHDTNRRAEEAADKGPRFMGIGVSGGEEGARFGPSIMGGGDKSAWDRVGHILEAISAKYEDEPCAAFLGAAGAGHLVKTVHNGIEYADMQMIAEVYGVMRDGFGMSAADVGEVLERWNGGILQSYLIEISGKVAKTADPETGKPMLDIILDTAGQKGTGRWTAIEALMLGTPASAIEAAVAARNMSARLEERAKGDRVFGAAPQRMDKDLIGIDALESALVAGKIICYAQGFGLILEAAKQYGWDMPLPEIAKIWRNGCIIRSAMLNDMSSALSDDANRNLMLAPFFNEKLKETEANLRQVVAQAMLHGLPVPALSAALSYFDIMRTQRSTANMLQGQRDFFGAHGFARTDKDGGGYHGPWAMG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AC21</accession>
    <name>A0A0M7AC21_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02999</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71992.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672497.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02999"/>
    <dbReference type="EnsemblBacteria" id="CTQ71992">
        <property type="protein sequence ID" value="CTQ71992"/>
        <property type="gene ID" value="LAX5112_02999"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.90">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035437">
        <property type="entry name" value="SNase_OB-fold_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50199">
        <property type="entry name" value="SSF50199"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="36"/>
            <end position="92"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71992.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="294" mass="31577" checksum="8D4E0FD100D34DB8" modified="2015-12-09" version="1">MKIRSLVVPLAVVGAFAGAVAWLIFAEPPALPELETVSSQTEPAVAARPENDAAPLAPSVPPQEEQAAASPPDAIRDVSPDGVSAPQVTGELTRVGPSERLLELLNPPVEPVPDGPLELVRVEVPDAGHLKSGRLTVRLAHIESLDLEATCKTEMGASWPCGMRARTFLRALIRRLKVSCVKQEDLAPQEISAVCTRGAIDLSSQLVRFGWATPLETAPDEFKELAEAAKAKEIGQWQTEWLTDLPQADWAEPSALNEIDLEQLAPNVVDWSLRTLTDGTTENSGAEQGLDQVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACG6</accession>
    <name>A0A0M7ACG6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Light-independent protochlorophyllide reductase subunit N</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">LAX5112_02966</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Porphyrin-containing compound metabolism; bacteriochlorophyll biosynthesis.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71900.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02966"/>
    <dbReference type="EnsemblBacteria" id="CTQ71900">
        <property type="protein sequence ID" value="CTQ71900"/>
        <property type="gene ID" value="LAX5112_02966"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00669"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016731">
        <property type="term" value="F:oxidoreductase activity, acting on iron-sulfur proteins as donors, NAD or NADP as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030494">
        <property type="term" value="P:bacteriochlorophyll biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015979">
        <property type="term" value="P:photosynthesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010245">
        <property type="entry name" value="BchY"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000510">
        <property type="entry name" value="Nase/OxRdtase_comp1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016209">
        <property type="entry name" value="Protochlorophyllide_Rdtase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00148">
        <property type="entry name" value="Oxidored_nitro"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000163">
        <property type="entry name" value="PCP_ChlB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02015">
        <property type="entry name" value="BchY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0077">Bacteriochlorophyll biosynthesis</keyword>
    <keyword evidence="4" id="KW-0149">Chlorophyll biosynthesis</keyword>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-0602">Photosynthesis</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Oxidored_nitro" evidence="7">
        <location>
            <begin position="76"/>
            <end position="466"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="50"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004800"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022531"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023181"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00148"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ71900.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="525" mass="55263" checksum="D6E4BE4B3F4EE460" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACP3</accession>
    <name>A0A0M7ACP3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Inositol-1-monophosphatase</fullName>
            <ecNumber evidence="6">3.1.3.25</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">suhB_3</name>
        <name evidence="7" type="ORF">LAX5112_03170</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 6">
            <text>a myo-inositol phosphate + H2O = myo-inositol + phosphate</text>
            <dbReference type="Rhea" id="RHEA:24056"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:17268"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:84139"/>
            <dbReference type="EC" id="3.1.3.25"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 6">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="3 6">Belongs to the inositol monophosphatase superfamily.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.25" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72407.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008191746.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03170"/>
    <dbReference type="EnsemblBacteria" id="CTQ72407">
        <property type="protein sequence ID" value="CTQ72407"/>
        <property type="gene ID" value="LAX5112_03170"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008934">
        <property type="term" value="F:inositol monophosphate 1-phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052832">
        <property type="term" value="F:inositol monophosphate 3-phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052833">
        <property type="term" value="F:inositol monophosphate 4-phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046855">
        <property type="term" value="P:inositol phosphate dephosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046854">
        <property type="term" value="P:phosphatidylinositol phosphate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01639">
        <property type="entry name" value="IMPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033942">
        <property type="entry name" value="IMPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020583">
        <property type="entry name" value="Inositol_monoP_metal-BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000760">
        <property type="entry name" value="Inositol_monophosphatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020550">
        <property type="entry name" value="Inositol_monophosphatase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022337">
        <property type="entry name" value="Inositol_monophosphatase_SuhB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00459">
        <property type="entry name" value="Inositol_P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00377">
        <property type="entry name" value="IMPHPHTASES"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01959">
        <property type="entry name" value="SBIMPHPHTASE"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00629">
        <property type="entry name" value="IMP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00630">
        <property type="entry name" value="IMP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5 6" id="KW-0460">Magnesium</keyword>
    <keyword evidence="4 6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009759"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU364068"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ72407.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="268" mass="29266" checksum="9E0E1B4E6E5CECE7" modified="2015-12-09" version="1">MARTAILNVMVQAATKAGRSLVRDFGEVENLQVSRKGPGDFVSAADRKAEEIVRSELTKARPTFGLVMEESGEVEGTDGQHRWHIDPLDGTTNFLHGIPIFATSIALERNGEIVAGVIYNPVMDELYTAERGRGAFLNDRRLRVAGRTELPEMVFGTGLPFIGRGDHGRTLRELRHIMPEVAGIRRAGAAALDLAWTASGRLDGYWERDLNSWDIAAGLLMVREAGGFVSDLDGKSKMLETGDVVVGNEDAHKHLLRLLKKAAAPQQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADC9</accession>
    <name>A0A0M7ADC9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Probable membrane transporter protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">LAX5112_03186</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the 4-toluene sulfonate uptake permease (TSUP) (TC 2.A.102) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72452.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672627.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03186"/>
    <dbReference type="EnsemblBacteria" id="CTQ72452">
        <property type="protein sequence ID" value="CTQ72452"/>
        <property type="gene ID" value="LAX5112_03186"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002781">
        <property type="entry name" value="TM_pro_TauE-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01925">
        <property type="entry name" value="TauE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="37"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="78"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="105"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="136"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="174"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="200"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="229"/>
            <end position="248"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363041"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ72452.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="253" mass="27035" checksum="F88951419295B7DB" modified="2015-12-09" version="1">MFDILASFSPQLLVFLAAILFVAGYIRGFAGFGAGMIFMPIAASVMLPSTAAATFLFIDSIVSLPLVRRVLHLCDWSTVLPAVFGSVLFVHAGAWLLATMDVLTLRWIISAVVAATLALVVSGWRYQKHPTPPVSFGVGAVSGILGGVSQVSAPPVAAFWLSGRNDTPVIRANLIMFFPLASIGTFVAYILNGFFTVEVARLLVMAIPVYGIALFLGSKGFTGSNQRTYRWIANMLIAIAAITSLPLLDPLLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AE73</accession>
    <name>A0A0M7AE73_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative thiamine biosynthesis protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03210</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72520.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672643.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03210"/>
    <dbReference type="EnsemblBacteria" id="CTQ72520">
        <property type="protein sequence ID" value="CTQ72520"/>
        <property type="gene ID" value="LAX5112_03210"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009228">
        <property type="term" value="P:thiamine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027939">
        <property type="entry name" value="NMT1/THI5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015168">
        <property type="entry name" value="SsuA/THI5"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31528">
        <property type="entry name" value="PTHR31528"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09084">
        <property type="entry name" value="NMT1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809438" evidence="1">
        <location>
            <begin position="23"/>
            <end position="313"/>
        </location>
    </feature>
    <feature type="domain" description="NMT1" evidence="2">
        <location>
            <begin position="35"/>
            <end position="247"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF09084"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ72520.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="313" mass="34577" checksum="51B48205FD1011BA" modified="2015-12-09" version="1">MKKTLLSAAFAATLFASAPVQAAEKLTVLMDWFTNPDHAPLITAQAMGFFEAEGLDVELIEPADPAMPPKLVAAGQADIAISYQPTLHAQIEEGLPLKWIGTLVETPLNSLIVLKDGPIKELKDLKGKKIGFSVSGFEDAMLGQMLRSVDLSVDNVELINVNFALSPSLMSGQVDAVIGAYRNFELTQIEIEGKEGKAFYPEENGVPIFDELIYVVHKDKTDDPRYAKFMAAIEAATIFLTNHPDEAWNAFIEAYPNLNDELNKRAWADTLPRFAKRPAALDEGRYQRFAEFMAENDLISKVVPVDTYAVEIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AF62</accession>
    <name>A0A0M7AF62_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03125</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72284.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672598.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72284">
        <property type="protein sequence ID" value="CTQ72284"/>
        <property type="gene ID" value="LAX5112_03125"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809399" evidence="1">
        <location>
            <begin position="35"/>
            <end position="141"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72284.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="141" mass="15736" checksum="8F93E7BF66A08E90" modified="2015-12-09" version="1">MSQSFMKRFSSRVSAPIAGAVLLLAAGAATQANAVPVSGLAAKAPLISDMTITVDHRGGPGRGWDRGHGRHQYELGPRQIRRSLRHRGFHRIKIIDRRGPMYVIKARGWRGSPVRLVVDSRNADIVRSRPLGPRYNRHSRW</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFV5</accession>
    <name>A0A0M7AFV5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">HIG1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03735</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74035.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008191614.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03735"/>
    <dbReference type="EnsemblBacteria" id="CTQ74035">
        <property type="protein sequence ID" value="CTQ74035"/>
        <property type="gene ID" value="LAX5112_03735"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007667">
        <property type="entry name" value="Hypoxia_induced_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04588">
        <property type="entry name" value="HIG_1_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51503">
        <property type="entry name" value="HIG1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="40"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="domain" description="HIG1" evidence="2">
        <location>
            <begin position="1"/>
            <end position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51503"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ74035.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="64" mass="7196" checksum="7173C6169E904940" modified="2015-12-09" version="1">MEQIYDILIFVGMAAVALVLFAGLLNMFRNGPANRSQKLMRWRVGLQFLVIVLVMGGLYFFGKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGJ9</accession>
    <name>A0A0M7AGJ9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Rhombosortase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_03733</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74029.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008196391.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03733"/>
    <dbReference type="EnsemblBacteria" id="CTQ74029">
        <property type="protein sequence ID" value="CTQ74029"/>
        <property type="gene ID" value="LAX5112_03733"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004252">
        <property type="term" value="F:serine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1540.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022764">
        <property type="entry name" value="Peptidase_S54_rhomboid_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035952">
        <property type="entry name" value="Rhomboid-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01694">
        <property type="entry name" value="Rhomboid"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF144091">
        <property type="entry name" value="SSF144091"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="21"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="76"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="110"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="136"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="175"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="198"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="domain" description="Rhomboid" evidence="6">
        <location>
            <begin position="72"/>
            <end position="219"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF01694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ74029.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="230" mass="25157" checksum="A8892977282BF74F" modified="2015-12-09" version="1">MFLPLHDHNRLKHVPRPYVNLSLIAANVLVFLLVQGGGITEGASASVYSYGLVPAVFFDLRDLAPHLQVLPEWSGIVTYAFLHGDFMHLLGNMLFLWVFGDNVEDAVGHIGYFVFYLLCAAAGGFAYAALDPGSEIPLIGASGAVSGVVAAYLMLHPRVRIWVLAFGRVPLRLRAIWILGAWVIYQFVQIATSIDSQVAWIAHIGGLAAGAILILFMRRRGVVLFDRDLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AH90</accession>
    <name>A0A0M7AH90_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Precorrin-6Y C(5,15)-methyltransferase [decarboxylating]</fullName>
            <ecNumber evidence="4">2.1.1.132</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">cobL</name>
        <name evidence="4" type="ORF">LAX5112_03659</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Cofactor biosynthesis; adenosylcobalamin biosynthesis.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.132" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73792.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673001.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03659"/>
    <dbReference type="EnsemblBacteria" id="CTQ73792">
        <property type="protein sequence ID" value="CTQ73792"/>
        <property type="gene ID" value="LAX5112_03659"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00148"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046025">
        <property type="term" value="F:precorrin-6Y C5,15-methyltransferase (decarboxylating) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008276">
        <property type="term" value="F:protein methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009236">
        <property type="term" value="P:cobalamin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd11644">
        <property type="entry name" value="Precorrin-6Y-MT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1010.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000878">
        <property type="entry name" value="4pyrrol_Mease"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035996">
        <property type="entry name" value="4pyrrol_Methylase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014777">
        <property type="entry name" value="4pyrrole_Mease_sub1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012818">
        <property type="entry name" value="CbiE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006365">
        <property type="entry name" value="Cbl_synth_CobL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014008">
        <property type="entry name" value="Cbl_synth_MTase_CbiT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00590">
        <property type="entry name" value="TP_methylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF036428">
        <property type="entry name" value="CobL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53790">
        <property type="entry name" value="SSF53790"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02467">
        <property type="entry name" value="CbiE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02469">
        <property type="entry name" value="CbiT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0169">Cobalamin biosynthesis</keyword>
    <keyword evidence="4" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="TP_methylase" evidence="3">
        <location>
            <begin position="9"/>
            <end position="185"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004953"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022573"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00590"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ73792.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="399" mass="42309" checksum="C3D493D4055FC273" modified="2015-12-09" version="1">MNSPWLTMIGLGEDGSFSAAAQTALAGSEIVYGSARHFDLVPELSGEKRLWPSPFAKVFEDLAALKGRSVAVLATGDPQWYGIGSSLARHFPSTDMTVFPAPSAFQLAAARLGWAVQECECLSVHGRPVDRLRCHLYPGARLLALTSNGHAPRDVAKLLQDEGYGASRMTVLEHLGGEKERIVSGIAKEWSKDVADFHTLGIEAVASPGSAVNSRVPGLPDEAFRHDGKMTKQEVRAVTLAALKPYPGALLWDIGSGCGSVAIEWLRAADRAKAIGLEPHKERRLMAAENASSLGVPHLDLIDTTAPDGLHDLPEPDAIFIGGGLTANGVLETCLSALKSGGSLVANAVTLESEAVLLDAYQQHGGDLKRLSVQRASAVGGLTGWRPAMPVTQWSFVKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIG0</accession>
    <name>A0A0M7AIG0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03796</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74206.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673109.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74206">
        <property type="protein sequence ID" value="CTQ74206"/>
        <property type="gene ID" value="LAX5112_03796"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="57"/>
            <end position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74206.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="216" mass="24730" checksum="0AA0A1591553C21D" modified="2015-12-09" version="1">MTKQSEPDDCIWMVEGHAADANSRGWQPAELFEDDKRRVEEILKAIGQSKIGWQLSKDQFPKDNYPRPDNYPAADEQPVPQIFSNGFTFLSAESAEIVSQFDLGEGALYPTRLWHSDRVTPMPGKFFYLNVASKKDTFLPEQSLGAKDIGHGEWQVPRLTKNLELKFSEAALQGADLWFEWKIITNFFISNRLKQALEARKLSKDWMLTRCSVVVD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIN3</accession>
    <name>A0A0M7AIN3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 5">Single-stranded DNA-binding protein</fullName>
            <shortName evidence="3">SSB</shortName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ssb</name>
        <name evidence="7" type="ORF">LAX5112_04057</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">Homotetramer.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ74958.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673376.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04057"/>
    <dbReference type="EnsemblBacteria" id="CTQ74958">
        <property type="protein sequence ID" value="CTQ74958"/>
        <property type="gene ID" value="LAX5112_04057"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003697">
        <property type="term" value="F:single-stranded DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd04496">
        <property type="entry name" value="SSB_OBF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00984">
        <property type="entry name" value="SSB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000424">
        <property type="entry name" value="Primosome_PriB/ssb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011344">
        <property type="entry name" value="ssDNA-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10302">
        <property type="entry name" value="PTHR10302"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00436">
        <property type="entry name" value="SSB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00621">
        <property type="entry name" value="ssb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50935">
        <property type="entry name" value="SSB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0227">DNA damage</keyword>
    <keyword evidence="2 3" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="3" id="KW-0234">DNA repair</keyword>
    <keyword evidence="3" id="KW-0235">DNA replication</keyword>
    <keyword evidence="1 3 4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="DNA-binding region" evidence="3">
        <location>
            <begin position="54"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="114"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="Important for interaction with partner proteins" evidence="3">
        <location>
            <begin position="179"/>
            <end position="184"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00252"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU000524"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ74958.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="184" mass="18936" checksum="F9FAE5E145129665" modified="2015-12-09" version="1">MAGSVNKVILVGNLGADPEIRRTQDGRPIANLRIATSESWRDRSSGERREKTEWHRVVIFNEGLCKVAENYLRKGSKVYLEGQLQTRKWQDQSGQDRYSTEVVLQGFNSNLTMLDGRGEGGGQPGGLPDYGNDQGGGGFGGGSSGGGGGSFGGGGGYGGGSSGGGFGGPSGGGGSGPMDDEIPF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJJ4</accession>
    <name>A0A0M7AJJ4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Probable membrane transporter protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">LAX5112_03981</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the 4-toluene sulfonate uptake permease (TSUP) (TC 2.A.102) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74807.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74807">
        <property type="protein sequence ID" value="CTQ74807"/>
        <property type="gene ID" value="LAX5112_03981"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002781">
        <property type="entry name" value="TM_pro_TauE-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01925">
        <property type="entry name" value="TauE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="31"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="56"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="93"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="118"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="151"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="203"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="250"/>
            <end position="268"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363041"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ74807.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="269" mass="27915" checksum="60699A9895A549F1" modified="2015-12-09" version="1">MFARRSITQIHDGRDNVSPVDFIVPQDLSGLATLLLVACSFLTSALTAAVGLGGGIALIAIMALVMPLNALVPVHGVVQFGSNAGRAMVQVKHVDWLIAVWFAIGAAAGAALGGSIAVQLPAAILKAGIALFVVWVVWGKPPKLGGMKKRAMAGAGFASTFLSMFFGAAGPIGGSVLSTLDLTRHQFVANQAITAMMMHVFKIAVFGLLGFAFAPWIGLIVAMIVSGFLGTLAGSQLLGRMNEQAFKKGFRLVMTALALNLMLQALGVI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJK0</accession>
    <name>A0A0M7AJK0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Bacterial extracellular solute-binding proteins, family 3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03915</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74596.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74596">
        <property type="protein sequence ID" value="CTQ74596"/>
        <property type="gene ID" value="LAX5112_03915"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="domain" description="PBPb" evidence="2">
        <location>
            <begin position="117"/>
            <end position="248"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00497"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ74596.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="270" mass="29894" checksum="5F5FF968CE971E7A" modified="2015-12-09" version="1">MNTLYRNARRLIAIVFLVMAVKLAGLEVPAYAETDLHLIYLPHRLTETSNKQYDRLLDEIFTGTELTVAREASPMKRALTLFLSDRNSCLFPISVKALHAVAEPDAIVSSDLIDIVSLRLYTPTGDAEKAFTSVDDFDPKRVGYIAGSGTVQGLGPKHELFVPIPSEEQLIRMLELGRLDAFLGHHPDTALALEDLNRPGLLRVSPITVSNVRFPISFVCHDTADGRHFIEEVNARIRQLHQDGDIRRVLGPHANLPTDAEDAIGAQVSQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJT3</accession>
    <name>A0A0M7AJT3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Lipopolysaccharide export system permease protein LptF</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">LAX5112_03879</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74490.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673185.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03879"/>
    <dbReference type="EnsemblBacteria" id="CTQ74490">
        <property type="protein sequence ID" value="CTQ74490"/>
        <property type="gene ID" value="LAX5112_03879"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030922">
        <property type="entry name" value="LptF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005495">
        <property type="entry name" value="LptG/LptF_permease"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33529">
        <property type="entry name" value="PTHR33529"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03739">
        <property type="entry name" value="LptF_LptG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR04407">
        <property type="entry name" value="LptF_YjgP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="5" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="9 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8 10" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="12"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="49"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="98"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="279"/>
            <end position="298"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="310"/>
            <end position="330"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="336"/>
            <end position="357"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00014213"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022519"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ74490.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="395" mass="42912" checksum="8831128EDD006CC8" modified="2015-12-09" version="1">MNTLERYIIRRTAYAFTLTLAAMTGVVWATQALRQLDLVTSKGQTIVQFIGITMLALPFLIVTVAPFALMIALILVLNSLSGDSELIVIDASGGSRFLVLKPVLAFATIIMLLVSALSLYVAPAGLAQLRTEITRVRADLVANIVKPGRFINVEEGLTFHIRNRSGKGTLDGLLMHDTRDPDTAFTYQAETGNIVEAAGRTLLVMQNGTIQRRPKQVGDMSIVRFQSYAFDLSNLIPEASEPVFKPSERSTANLLGPPGNDYFAVTHPERLRAEIHERFSLPLYCLSFALIVFAFLGVARTTRQGRGMAIVGAITCCVLLRTTGFGITAISNDSAVLYAMRYVVPVLGGGLALVSILRGHQGKQSQALQRFQLVIGDWVEAITAKLTRNRAGSAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AK62</accession>
    <name>A0A0M7AK62_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7 12">Aspartate-semialdehyde dehydrogenase</fullName>
            <shortName evidence="12">ASA dehydrogenase</shortName>
            <shortName evidence="12">ASADH</shortName>
            <ecNumber evidence="7 12">1.2.1.11</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="12">Aspartate-beta-semialdehyde dehydrogenase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="14" type="primary">asd2</name>
        <name evidence="12" type="synonym">asd</name>
        <name evidence="14" type="ORF">LAX5112_03993</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="12">Catalyzes the NADPH-dependent formation of L-aspartate-semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl-4-phosphate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 12">
            <text>L-aspartate 4-semialdehyde + NADP(+) + phosphate = 4-phospho-L-aspartate + H(+) + NADPH</text>
            <dbReference type="Rhea" id="RHEA:24284"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57535"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="ChEBI" id="CHEBI:537519"/>
            <dbReference type="EC" id="1.2.1.11"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3 12">Amino-acid biosynthesis; L-lysine biosynthesis via DAP pathway; (S)-tetrahydrodipicolinate from L-aspartate: step 2/4.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2 12">Amino-acid biosynthesis; L-methionine biosynthesis via de novo pathway; L-homoserine from L-aspartate: step 2/3.</text>
    </comment>
    <comment type="pathway">
        <text evidence="4 12">Amino-acid biosynthesis; L-threonine biosynthesis; L-threonine from L-aspartate: step 2/5.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6 12">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5 12">Belongs to the aspartate-semialdehyde dehydrogenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="1.2.1.11" evidence="7 12"/>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74832.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673285.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03993"/>
    <dbReference type="EnsemblBacteria" id="CTQ74832">
        <property type="protein sequence ID" value="CTQ74832"/>
        <property type="gene ID" value="LAX5112_03993"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00034">
        <property type="reaction ID" value="UER00016"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00050">
        <property type="reaction ID" value="UER00463"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00051">
        <property type="reaction ID" value="UER00464"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004073">
        <property type="term" value="F:aspartate-semialdehyde dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050661">
        <property type="term" value="F:NADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046983">
        <property type="term" value="F:protein dimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071266">
        <property type="term" value="P:'de novo' L-methionine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019877">
        <property type="term" value="P:diaminopimelate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009097">
        <property type="term" value="P:isoleucine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009089">
        <property type="term" value="P:lysine biosynthetic process via diaminopimelate"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009088">
        <property type="term" value="P:threonine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02121">
        <property type="entry name" value="ASADH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012080">
        <property type="entry name" value="Asp_semialdehyde_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005986">
        <property type="entry name" value="Asp_semialdehyde_DH_beta"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000534">
        <property type="entry name" value="Semialdehyde_DH_NAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012280">
        <property type="entry name" value="Semialdhyde_DH_dimer_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01118">
        <property type="entry name" value="Semialdhyde_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02774">
        <property type="entry name" value="Semialdhyde_dhC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00859">
        <property type="entry name" value="Semialdhyde_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01296">
        <property type="entry name" value="asd_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="12" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="9 12" id="KW-0220">Diaminopimelate biosynthesis</keyword>
    <keyword evidence="10 12" id="KW-0457">Lysine biosynthesis</keyword>
    <keyword evidence="11 12" id="KW-0486">Methionine biosynthesis</keyword>
    <keyword evidence="12" id="KW-0521">NADP</keyword>
    <keyword evidence="12 14" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 12" id="KW-0791">Threonine biosynthesis</keyword>
    <feature type="domain" description="Semialdhyde_dh" evidence="13">
        <location>
            <begin position="4"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="active site" description="Acyl-thioester intermediate" evidence="12">
        <location>
            <position position="130"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="12">
        <location>
            <position position="242"/>
        </location>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <begin position="11"/>
            <end position="14"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <begin position="39"/>
            <end position="40"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="99"/>
        </location>
        <ligand>
            <name>phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="157"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <begin position="160"/>
            <end position="161"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="182"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="235"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="315"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001636"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005021"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00005097"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00010584"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00013120"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022697"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022915"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023154"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02121"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="SMART" id="SM00859"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="CTQ74832.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="344" mass="37581" checksum="03B974230D5DFBD1" modified="2015-12-09" version="1">MGFKIAIAGATGNVGREMLDILAERGFPADEVVALASRRSQGTEVSFGDKTLKVQAMENYDFSDTDICLMSAGGTISKEWSPRIGAKGCVVIDNSSAWRYDAEVPLIVPEVNADAITGFTKKNIIANPNCSTAQLVVALKPLHDHAKIKRVVVSTYQSVSGGGKDAMEELFNQTRAVFVNDPIEPEKFTKRIAFNVIPHIDSFMEDGYTKEEWKVLAETKKMLDPAIKVTCTAVRVPVFIGHSESINIEFENEITAEEARNILREAPGCLVIDKHEDGGYITPYESAGEDATYISRIREDATIENGLNMWVVSDNLRKGAALNTVQIAEVLVNRGLITPKKAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKV0</accession>
    <name>A0A0M7AKV0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Flagellar L-ring protein</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Basal body L-ring protein</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8" type="primary">flgH_2</name>
        <name evidence="6" type="synonym">flgH</name>
        <name evidence="8" type="ORF">LAX5112_04094</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 6">Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">The basal body constitutes a major portion of the flagellar organelle and consists of four rings (L,P,S, and M) mounted on a central rod.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cell outer membrane</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="6">Bacterial flagellum basal body</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the FlgH family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ75036.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451987.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04094"/>
    <dbReference type="EnsemblBacteria" id="CTQ75036">
        <property type="protein sequence ID" value="CTQ75036"/>
        <property type="gene ID" value="LAX5112_04094"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009427">
        <property type="term" value="C:bacterial-type flagellum basal body, distal rod, L ring"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009279">
        <property type="term" value="C:cell outer membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003774">
        <property type="term" value="F:cytoskeletal motor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071973">
        <property type="term" value="P:bacterial-type flagellum-dependent cell motility"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00415">
        <property type="entry name" value="FlgH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000527">
        <property type="entry name" value="Flag_Lring"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34933">
        <property type="entry name" value="PTHR34933"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02107">
        <property type="entry name" value="FlgH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01008">
        <property type="entry name" value="FLGLRINGFLGH"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6" id="KW-0975">Bacterial flagellum</keyword>
    <keyword evidence="5 6" id="KW-0998">Cell outer membrane</keyword>
    <keyword evidence="6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="95"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="109"/>
            <end position="140"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002591"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023143"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023237"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00415"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ75036.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="234" mass="25031" checksum="BEC882727BC58B64" modified="2015-12-09" version="1">MRLMLVSLGAVLLSGCAGQLEDIGRAPEMTPVGYGLANRPATVYPLGTFSKGGIKDYNSLWRNDRENFFADPRAKKIGDVLTVVIQIDDRAELDNTSERGRSADIGIGGSYSAGSNNSTSGGEAELNGNSGSSSAGSGSIDRSEEIELSVAAIVIDRLPNGNMVISGSQEVRVNYEMRILNVGGIVRPRDIESNNTIPYDKIAEARISYGGRGRISEVQQPGWGQQIYDIVTPF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALD6</accession>
    <name>A0A0M7ALD6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04197</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75351.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673435.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75351">
        <property type="protein sequence ID" value="CTQ75351"/>
        <property type="gene ID" value="LAX5112_04197"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ75351.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="93" mass="10627" checksum="A699030CDA308A41" modified="2015-12-09" version="1">MPVTGSKFKNNFFRTRDAHKKAWAKNDQIWKLRRSRAIQKSQHIATQLVNSVLRINQASNELQALHLTKVRLNNPDGGYSTPSAIATRINMQV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALE3</accession>
    <name>A0A0M7ALE3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Flagellar hook-basal body complex protein FliE</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">fliE</name>
        <name evidence="4" type="ORF">LAX5112_04099</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 3">Bacterial flagellum basal body</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 3">Belongs to the FliE family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ75050.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673362.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04099"/>
    <dbReference type="EnsemblBacteria" id="CTQ75050">
        <property type="protein sequence ID" value="CTQ75050"/>
        <property type="gene ID" value="LAX5112_04099"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009425">
        <property type="term" value="C:bacterial-type flagellum basal body"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003774">
        <property type="term" value="F:cytoskeletal motor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005198">
        <property type="term" value="F:structural molecule activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071973">
        <property type="term" value="P:bacterial-type flagellum-dependent cell motility"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00724">
        <property type="entry name" value="FliE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001624">
        <property type="entry name" value="FliE"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34653">
        <property type="entry name" value="PTHR34653"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02049">
        <property type="entry name" value="FliE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0975">Bacterial flagellum</keyword>
    <keyword evidence="4" id="KW-0966">Cell projection</keyword>
    <keyword evidence="4" id="KW-0969">Cilium</keyword>
    <keyword evidence="4" id="KW-0282">Flagellum</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009272"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00724"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ75050.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="112" mass="11526" checksum="3660D9C30C473925" modified="2015-12-09" version="1">MINEISALTSAASSDGILKSSSTTRYMNSTPELGGTEAVSGPSFSDAIAEVSQSAIDKVKNGEAAAIAGVDGQASVQQVVEAVMQAESTLQTAIAIRDKVVTAYQEISRMTI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AM68</accession>
    <name>A0A0M7AM68_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Methylmalonyl-CoA carboxyltransferase 12S subunit</fullName>
            <ecNumber evidence="4">2.1.3.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_03940</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.1.3.1" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74694.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673246.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03940"/>
    <dbReference type="EnsemblBacteria" id="CTQ74694">
        <property type="protein sequence ID" value="CTQ74694"/>
        <property type="gene ID" value="LAX5112_03940"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016874">
        <property type="term" value="F:ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047154">
        <property type="term" value="F:methylmalonyl-CoA carboxytransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034733">
        <property type="entry name" value="AcCoA_carboxyl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029045">
        <property type="entry name" value="ClpP/crotonase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011763">
        <property type="entry name" value="COA_CT_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011762">
        <property type="entry name" value="COA_CT_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045190">
        <property type="entry name" value="MCCB/AccD1-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22855">
        <property type="entry name" value="PTHR22855"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01039">
        <property type="entry name" value="Carboxyl_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52096">
        <property type="entry name" value="SSF52096"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50989">
        <property type="entry name" value="COA_CT_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50980">
        <property type="entry name" value="COA_CT_NTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="CoA carboxyltransferase N-terminal" evidence="2">
        <location>
            <begin position="22"/>
            <end position="278"/>
        </location>
    </feature>
    <feature type="domain" description="CoA carboxyltransferase C-terminal" evidence="3">
        <location>
            <begin position="278"/>
            <end position="527"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ74694.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="535" mass="57269" checksum="0D55DA145F0E73A9" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMU3</accession>
    <name>A0A0M7AMU3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_04342</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75742.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75742">
        <property type="protein sequence ID" value="CTQ75742"/>
        <property type="gene ID" value="LAX5112_04342"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="42"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ75742.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="62" mass="6321" checksum="3F7C44E7CA2F24E7" modified="2015-12-09" version="1">MAKAMPAATEERSRRQGPGAARGPNPASAPDGLGFLIVKNGLFWGSIALSGAVLYGAASIFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMV6</accession>
    <name>A0A0M7AMV6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Trehalose transport system permease protein SugB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">sugB_2</name>
        <name evidence="7" type="ORF">LAX5112_04600</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000027">
        <property type="protein sequence ID" value="CTQ76465.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008196227.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000027.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04600"/>
    <dbReference type="EnsemblBacteria" id="CTQ76465">
        <property type="protein sequence ID" value="CTQ76465"/>
        <property type="gene ID" value="LAX5112_04600"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="15"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="112"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="145"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="179"/>
            <end position="199"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="220"/>
            <end position="245"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="277"/>
            <end position="298"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="108"/>
            <end position="298"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ76465.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="313" mass="34575" checksum="D5157D2BD363D6CE" modified="2015-12-09" version="1">MSSYSITEPSAPQKWIAGTLVIAYAVITLLPLVWILTTGFKSPVDAIAYPPKVLFEPSLEGYVNLFTTRTRVSPEQLQALPPPETWYEEVVRNRDMVIAGPSRYGERFLNSVIIGFGSTFLSVFLGTLAAYAFSRFKVPLKDDLLFFILSTRMMPPIAVAIPIFLMFRTLGLSDTHLGMILLYTAVNISLAVWLLKGFIDEIPREYEEAALIDGYTRFQAFYKVVLPQAATGIASTAIFCLIFSWNEYAFAVLLTSGTAQTAPPFIPTIIGVGGQDWPAVAAGATLFLVPVMVFTILLRKHLLRGITFGAVRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANH9</accession>
    <name>A0A0M7ANH9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="15">Branched-chain-amino-acid aminotransferase</fullName>
            <shortName evidence="15">BCAT</shortName>
            <ecNumber evidence="15">2.6.1.42</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="16" type="primary">ilvE_3</name>
        <name evidence="15" type="synonym">ilvE</name>
        <name evidence="16" type="ORF">LAX5112_04135</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="17" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5 15">Acts on leucine, isoleucine and valine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 15">
            <text>2-oxoglutarate + L-isoleucine = (S)-3-methyl-2-oxopentanoate + L-glutamate</text>
            <dbReference type="Rhea" id="RHEA:24801"/>
            <dbReference type="ChEBI" id="CHEBI:16810"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:35146"/>
            <dbReference type="ChEBI" id="CHEBI:58045"/>
            <dbReference type="EC" id="2.6.1.42"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2 15">
            <text>2-oxoglutarate + L-leucine = 4-methyl-2-oxopentanoate + L-glutamate</text>
            <dbReference type="Rhea" id="RHEA:18321"/>
            <dbReference type="ChEBI" id="CHEBI:16810"/>
            <dbReference type="ChEBI" id="CHEBI:17865"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:57427"/>
            <dbReference type="EC" id="2.6.1.42"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3 15">
            <text>2-oxoglutarate + L-valine = 3-methyl-2-oxobutanoate + L-glutamate</text>
            <dbReference type="Rhea" id="RHEA:24813"/>
            <dbReference type="ChEBI" id="CHEBI:11851"/>
            <dbReference type="ChEBI" id="CHEBI:16810"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:57762"/>
            <dbReference type="EC" id="2.6.1.42"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="4 14">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="6 15">Amino-acid biosynthesis; L-isoleucine biosynthesis; L-isoleucine from 2-oxobutanoate: step 4/4.</text>
    </comment>
    <comment type="pathway">
        <text evidence="8 15">Amino-acid biosynthesis; L-leucine biosynthesis; L-leucine from 3-methyl-2-oxobutanoate: step 4/4.</text>
    </comment>
    <comment type="pathway">
        <text evidence="7 15">Amino-acid biosynthesis; L-valine biosynthesis; L-valine from pyruvate: step 4/4.</text>
    </comment>
    <comment type="similarity">
        <text evidence="9 13">Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.6.1.42" evidence="15"/>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75174.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673394.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04135"/>
    <dbReference type="EnsemblBacteria" id="CTQ75174">
        <property type="protein sequence ID" value="CTQ75174"/>
        <property type="gene ID" value="LAX5112_04135"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00047">
        <property type="reaction ID" value="UER00058"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00048">
        <property type="reaction ID" value="UER00073"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00049">
        <property type="reaction ID" value="UER00062"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052656">
        <property type="term" value="F:L-isoleucine transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052654">
        <property type="term" value="F:L-leucine transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050048">
        <property type="term" value="F:L-leucine:2-oxoglutarate aminotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052655">
        <property type="term" value="F:L-valine transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009097">
        <property type="term" value="P:isoleucine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009098">
        <property type="term" value="P:leucine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009099">
        <property type="term" value="P:valine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.470.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001544">
        <property type="entry name" value="Aminotrans_IV"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018300">
        <property type="entry name" value="Aminotrans_IV_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036038">
        <property type="entry name" value="Aminotransferase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005785">
        <property type="entry name" value="B_amino_transI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043132">
        <property type="entry name" value="BCAT-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043131">
        <property type="entry name" value="BCAT-like_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01063">
        <property type="entry name" value="Aminotran_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56752">
        <property type="entry name" value="SSF56752"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01122">
        <property type="entry name" value="ilvE_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00770">
        <property type="entry name" value="AA_TRANSFER_CLASS_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10 15" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="15 16" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="12 15" id="KW-0100">Branched-chain amino acid biosynthesis</keyword>
    <keyword evidence="11 14" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="15 16" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000627"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00000995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00001745"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00003109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00004824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00004931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00005072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00009320"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU004106"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="RuleBase" id="RU004516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="RuleBase" id="RU364094"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="CTQ75174.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="301" mass="33256" checksum="EBE6EB9289C213C4" modified="2015-12-09" version="1">MAAQPFDQLTGDIWYDGAFVPWSDAKLHVLSHGLHYGSSVFEGERAYGGRIFKSEEHTERLLASARELGFEIPWSAVQINSAKEETLARMNLADAYIRPVAWRGSEMMGISAQKNTIHLAIAAWEWPSYFAPEERLKGIRLDMADYRRPDPRTAPFKAKAAGLYMICTISKHAAEAKGYTDALMLDWRGQVAEATGANVFFVKDGEIHTPTPDCFLNGITRQTVIGLARDRGIEVVERVIMPEELSSFEQCFVTGTAAEVTPVSEIAGNSYVVGDIIKTLMEDYDAAVRPQVGEMKTAATG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANM5</accession>
    <name>A0A0M7ANM5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF2293 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04372</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75820.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673592.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000023.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04372"/>
    <dbReference type="EnsemblBacteria" id="CTQ75820">
        <property type="protein sequence ID" value="CTQ75820"/>
        <property type="gene ID" value="LAX5112_04372"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018744">
        <property type="entry name" value="DUF2293"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017044">
        <property type="entry name" value="UCP036238"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10056">
        <property type="entry name" value="DUF2293"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF036238">
        <property type="entry name" value="UCP036238"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF2293" evidence="1">
        <location>
            <begin position="14"/>
            <end position="92"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF10056"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75820.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="105" mass="11860" checksum="3C129D52E41AE04C" modified="2015-12-09" version="1">MVAGTKRQKDMRKALRLLLPRVPMADAEAILEGALAGHLRHLPPSIAVWQAATSRIRHEHTDYDDLLDDGYDRDSARFFVLDAMNDMLETWGSQKRVSAEADDEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANU4</accession>
    <name>A0A0M7ANU4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Flp pilus assembly protein TadG</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04467</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ76102.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673670.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000024.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76102">
        <property type="protein sequence ID" value="CTQ76102"/>
        <property type="gene ID" value="LAX5112_04467"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012495">
        <property type="entry name" value="TadE"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07811">
        <property type="entry name" value="TadE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="41"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76102.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="179" mass="19565" checksum="B733E239C3DC7B2D" modified="2015-12-09" version="1">MRVLRSFLKKKDGATAVEFALIGLPFFALFLSCFEMGLLFIRMTMLDHAVNTTSKTVYIGAVTQGLADNTVSREDFEEDICDIVGIVVPDCVSNLTIELIEISSLIDLPETNAVCVDTSNDFKPVVTFNPGSANSIVFMRACLTTDVYTPGLGFGLALSKTANNQYEMVSSMAFMNEPF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APW0</accession>
    <name>A0A0M7APW0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Iron-sulfur cluster biosynthesis transcriptional regulator SufR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04373</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75823.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673593.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000023.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04373"/>
    <dbReference type="EnsemblBacteria" id="CTQ75823">
        <property type="protein sequence ID" value="CTQ75823"/>
        <property type="gene ID" value="LAX5112_04373"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ75823.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="209" mass="22851" checksum="D3ED0B4BF2683802" modified="2015-12-09" version="1">MSDRTRIRLLNALKAAGPQTAAELAEELNVTSVAVRQHLDGLLEAELVEFEDLKGSVGRPKRLWSLSAKGHGQFPDNHAGLVSGLLSGVTDIYGPDGLEKLIAHREDKSRKLYSEVLGQEQELRGKVAALADLRSREGYMAEVQRDGDAFLLIENHCSICAAATACQEFCRSELNLFQSILGDGVHVERQEHLLSGGRRCVYRIAAEGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQG0</accession>
    <name>A0A0M7AQG0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Recombinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_04888</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000034">
        <property type="protein sequence ID" value="CTQ77375.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04888"/>
    <dbReference type="EnsemblBacteria" id="CTQ77375">
        <property type="protein sequence ID" value="CTQ77375"/>
        <property type="gene ID" value="LAX5112_04888"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000150">
        <property type="term" value="F:DNA strand exchange activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1390">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1750.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038109">
        <property type="entry name" value="DNA_bind_recomb_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011109">
        <property type="entry name" value="DNA_bind_recombinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006119">
        <property type="entry name" value="Resolv_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036162">
        <property type="entry name" value="Resolvase-like_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07508">
        <property type="entry name" value="Recombinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00239">
        <property type="entry name" value="Resolvase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00857">
        <property type="entry name" value="Resolvase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53041">
        <property type="entry name" value="SSF53041"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51737">
        <property type="entry name" value="RECOMBINASE_DNA_BIND"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51736">
        <property type="entry name" value="RECOMBINASES_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Resolvase/invertase-type recombinase catalytic" evidence="1">
        <location>
            <begin position="1"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="domain" description="Recombinase" evidence="2">
        <location>
            <begin position="179"/>
            <end position="303"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51736"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ77375.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="503" mass="57947" checksum="A3444604BCF12441" modified="2015-12-09" version="1">MVYARMSTEHQRYSVENQSDVMEQYAAKHGMTIVRHYVDSGKSGLKIQGREGLAQLIHDVQAGDRSFDSILVYDVSRWGRFQDVDEAAHYEHICRQAGYTLHYCAEQFTNDGSPISSIVKGVKRAMAGEYSRELSNKVFIGQCRLIQLGYRQGGPAGYGLRRMLLDERGNPKTELQRGEHKSLQTDRVVLVPGPAHEVATIRRIYQMFVEAGRSEAEIAAQLNDEGVRTDLDRPWTRGTINQILTNEKYIGNNVFNRTSFKLKQQRVRNAPEDWVRAEGAFHAIVDAAAFHTVQGIIRERSRRLTDDDMLQRLKRLYNRYGFLSGLIIDEAEETPPSSAYSYRFGSLLRAYQLIGFTPDRDYRHIEINRHLRQYHRDVTAKVLAKIEAIGAEVSMMPDTELLRINDEFTASLVIARHMTTPHTGRSRWKIRFETSLKPDITIGVRMDQENERALDYYLLPRLDFFRPALPLADVNNLSFDSYRFDNLDYLFDMADRAHIKRVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQN5</accession>
    <name>A0A0M7AQN5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="14 15">Protein translocase subunit SecA</fullName>
            <ecNumber evidence="14">7.4.2.8</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="primary">secA</name>
        <name evidence="21" type="ORF">LAX5112_04840</name>
    </gene>
    <organism evidence="21 22">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="22" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="22">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="14">Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="14">Monomer and homodimer. Part of the essential Sec protein translocation apparatus which comprises SecA, SecYEG and auxiliary proteins SecDF-YajC and YidC.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="14">Cell membrane</location>
            <topology evidence="14">Peripheral membrane protein</topology>
            <orientation evidence="14">Cytoplasmic side</orientation>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="14">Cytoplasm</location>
        </subcellularLocation>
        <text evidence="14">Distribution is 50-50.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 14 15">Belongs to the SecA family.</text>
    </comment>
    <dbReference type="EC" id="7.4.2.8" evidence="14"/>
    <dbReference type="EMBL" id="CXWD01000032">
        <property type="protein sequence ID" value="CTQ77219.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673989.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000032.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04840"/>
    <dbReference type="EnsemblBacteria" id="CTQ77219">
        <property type="protein sequence ID" value="CTQ77219"/>
        <property type="gene ID" value="LAX5112_04840"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0065002">
        <property type="term" value="P:intracellular protein transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017038">
        <property type="term" value="P:protein import"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006605">
        <property type="term" value="P:protein targeting"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd18803">
        <property type="entry name" value="SF2_C_secA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01382">
        <property type="entry name" value="SecA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004027">
        <property type="entry name" value="SEC_C_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000185">
        <property type="entry name" value="SecA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020937">
        <property type="entry name" value="SecA_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011115">
        <property type="entry name" value="SecA_DEAD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014018">
        <property type="entry name" value="SecA_motor_DEAD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011130">
        <property type="entry name" value="SecA_preprotein_X-link_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044722">
        <property type="entry name" value="SecA_SF2_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011116">
        <property type="entry name" value="SecA_Wing/Scaffold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036266">
        <property type="entry name" value="SecA_Wing/Scaffold_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036670">
        <property type="entry name" value="SecA_X-link_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30612">
        <property type="entry name" value="PTHR30612"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02810">
        <property type="entry name" value="SEC-C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07517">
        <property type="entry name" value="SecA_DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01043">
        <property type="entry name" value="SecA_PP_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07516">
        <property type="entry name" value="SecA_SW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00906">
        <property type="entry name" value="SECA"/>
    </dbReference>
    <dbReference type="SMART" id="SM00957">
        <property type="entry name" value="SecA_DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00958">
        <property type="entry name" value="SecA_PP_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81767">
        <property type="entry name" value="SSF81767"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81886">
        <property type="entry name" value="SSF81886"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00963">
        <property type="entry name" value="secA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01312">
        <property type="entry name" value="SECA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51196">
        <property type="entry name" value="SECA_MOTOR_DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 14 15" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 14" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="16" id="KW-0175">Coiled coil</keyword>
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    <keyword evidence="13 14" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7 14 15" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10 14 15" id="KW-0653">Protein transport</keyword>
    <keyword evidence="22" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="11 14" id="KW-1278">Translocase</keyword>
    <keyword evidence="12 14 15" id="KW-0811">Translocation</keyword>
    <keyword evidence="3 14 15" id="KW-0813">Transport</keyword>
    <keyword evidence="8" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="SECA_MOTOR_DEAD" evidence="20">
        <location>
            <begin position="5"/>
            <end position="637"/>
        </location>
    </feature>
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        <location>
            <begin position="91"/>
            <end position="249"/>
        </location>
    </feature>
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        <location>
            <begin position="426"/>
            <end position="645"/>
        </location>
    </feature>
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        <location>
            <begin position="869"/>
            <end position="903"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="16">
        <location>
            <begin position="23"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="17">
        <location>
            <begin position="873"/>
            <end position="891"/>
        </location>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="89"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <begin position="107"/>
            <end position="111"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="524"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007650"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023010"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="RuleBase" id="RU003874"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="18">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="19">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="20">
        <source>
            <dbReference type="PROSITE" id="PS51196"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="21">
        <source>
            <dbReference type="EMBL" id="CTQ77219.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="22">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="922" mass="103623" checksum="CCC605B27214A6D5" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AR55</accession>
    <name>A0A0M7AR55_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Anaerobic benzoate catabolism transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04889</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000034">
        <property type="protein sequence ID" value="CTQ77379.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674034.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000034.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77379">
        <property type="protein sequence ID" value="CTQ77379"/>
        <property type="gene ID" value="LAX5112_04889"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01381">
        <property type="entry name" value="HTH_3"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="1">
        <location>
            <begin position="5"/>
            <end position="60"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77379.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="105" mass="11862" checksum="6C9E246E3E938580" modified="2015-12-09" version="1">MKTRLKELRKAKGLTLSALAERTGTSNQHISHLENGRRRLTTEWLEKLARELQCHPFDVLEPDVPYLSAQEDFLLRVFRELTPAQKAAIAGAVTELKPESVPDAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARZ0</accession>
    <name>A0A0M7ARZ0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase</fullName>
            <ecNumber evidence="6">3.7.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">iolD</name>
        <name evidence="6" type="ORF">LAX5112_04563</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the TPP enzyme family.</text>
    </comment>
    <dbReference type="EC" id="3.7.1.-" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000026">
        <property type="protein sequence ID" value="CTQ76344.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673757.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000026.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04563"/>
    <dbReference type="EnsemblBacteria" id="CTQ76344">
        <property type="protein sequence ID" value="CTQ76344"/>
        <property type="gene ID" value="LAX5112_04563"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
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        <property type="term" value="F:hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019310">
        <property type="term" value="P:inositol catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
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        <property type="entry name" value="DHS-like_NAD/FAD-binding_dom"/>
    </dbReference>
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        <property type="entry name" value="Myo_inos_IolD"/>
    </dbReference>
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        <property type="entry name" value="THDP-binding"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012000">
        <property type="entry name" value="Thiamin_PyroP_enz_cen_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012001">
        <property type="entry name" value="Thiamin_PyroP_enz_TPP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000399">
        <property type="entry name" value="TPP-bd_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045229">
        <property type="entry name" value="TPP_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011766">
        <property type="entry name" value="TPP_enzyme-bd_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18968">
        <property type="entry name" value="PTHR18968"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18968:SF9">
        <property type="entry name" value="PTHR18968:SF9"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02775">
        <property type="entry name" value="TPP_enzyme_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00205">
        <property type="entry name" value="TPP_enzyme_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02776">
        <property type="entry name" value="TPP_enzyme_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52467">
        <property type="entry name" value="SSF52467"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52518">
        <property type="entry name" value="SSF52518"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR04377">
        <property type="entry name" value="myo_inos_iolD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00187">
        <property type="entry name" value="TPP_ENZYMES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0786">Thiamine pyrophosphate</keyword>
    <feature type="domain" description="TPP_enzyme_N" evidence="5">
        <location>
            <begin position="9"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="domain" description="TPP_enzyme_M" evidence="3">
        <location>
            <begin position="221"/>
            <end position="354"/>
        </location>
    </feature>
    <feature type="domain" description="TPP_enzyme_C" evidence="4">
        <location>
            <begin position="433"/>
            <end position="572"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007812"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU362132"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00205"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF02775"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF02776"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ76344.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="621" mass="67331" checksum="2CE3F05F9A05DA69" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AS48</accession>
    <name>A0A0M7AS48_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Acyl-CoA dehydrogenase</fullName>
            <ecNumber evidence="9">1.3.99.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">mmgC_8</name>
        <name evidence="9" type="ORF">LAX5112_04850</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 5">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the acyl-CoA dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.3.99.-" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000032">
        <property type="protein sequence ID" value="CTQ77246.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04850"/>
    <dbReference type="EnsemblBacteria" id="CTQ77246">
        <property type="protein sequence ID" value="CTQ77246"/>
        <property type="gene ID" value="LAX5112_04850"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003995">
        <property type="term" value="F:acyl-CoA dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.540.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006089">
        <property type="entry name" value="Acyl-CoA_DH_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006091">
        <property type="entry name" value="Acyl-CoA_Oxase/DH_mid-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046373">
        <property type="entry name" value="Acyl-CoA_Oxase/DH_mid-dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036250">
        <property type="entry name" value="AcylCo_DH-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009075">
        <property type="entry name" value="AcylCo_DH/oxidase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013786">
        <property type="entry name" value="AcylCoA_DH/ox_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037069">
        <property type="entry name" value="AcylCoA_DH/ox_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009100">
        <property type="entry name" value="AcylCoA_DH/oxidase_NM_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00441">
        <property type="entry name" value="Acyl-CoA_dh_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02770">
        <property type="entry name" value="Acyl-CoA_dh_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02771">
        <property type="entry name" value="Acyl-CoA_dh_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47203">
        <property type="entry name" value="SSF47203"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56645">
        <property type="entry name" value="SSF56645"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00073">
        <property type="entry name" value="ACYL_COA_DH_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0274">FAD</keyword>
    <keyword evidence="3 5" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="5 9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Acyl-CoA_dh_N" evidence="8">
        <location>
            <begin position="175"/>
            <end position="286"/>
        </location>
    </feature>
    <feature type="domain" description="Acyl-CoA_dh_M" evidence="7">
        <location>
            <begin position="293"/>
            <end position="393"/>
        </location>
    </feature>
    <feature type="domain" description="Acyl-CoA_dh_1" evidence="6">
        <location>
            <begin position="407"/>
            <end position="556"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009347"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU362125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00441"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF02770"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF02771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ77246.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="562" mass="61439" checksum="A346B9C3A97C62E5" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASK9</accession>
    <name>A0A0M7ASK9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative chromosome-partitioning protein ParB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">parB_3</name>
        <name evidence="3" type="ORF">LAX5112_04912</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000034">
        <property type="protein sequence ID" value="CTQ77442.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674055.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000034.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04912"/>
    <dbReference type="EnsemblBacteria" id="CTQ77442">
        <property type="protein sequence ID" value="CTQ77442"/>
        <property type="gene ID" value="LAX5112_04912"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003115">
        <property type="entry name" value="ParB/Sulfiredoxin_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036086">
        <property type="entry name" value="ParB/Sulfiredoxin_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02195">
        <property type="entry name" value="ParBc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00470">
        <property type="entry name" value="ParB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF110849">
        <property type="entry name" value="SSF110849"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="257"/>
            <end position="286"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="298"/>
            <end position="315"/>
        </location>
    </feature>
    <feature type="domain" description="ParB" evidence="2">
        <location>
            <begin position="4"/>
            <end position="96"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00470"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ77442.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="316" mass="35404" checksum="1F51D072930FE53C" modified="2015-12-09" version="1">MADTTIKISLIDVPETRLRPVDPDWAATLADMIREAGHKTPIDVVSEGERFRLVAGEHRLEAFKLLKCKEIACRVLTPTTDQPAEELRLHEILENLGRKDFNALERSEALFELKRIYEALHPQTKHGGNRKGQTFKNKQQNQVAIFAFCQNATEKTGLSRRSVELAIQIFEGLSATSRERLKSTPFAEKQSDLKALAELDHDAQAKVLDLVMGELPKAASIADAKLLLSGRPPEKDTEKLLKRVGDILPSLPRAARFFAGLFVFPLGFWWTAVILDSVFLFGWGVASVPILEDWGGQMIRWLFYTGTVVGAIKMLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASS4</accession>
    <name>A0A0M7ASS4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04869</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000033">
        <property type="protein sequence ID" value="CTQ77310.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674017.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000033.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77310">
        <property type="protein sequence ID" value="CTQ77310"/>
        <property type="gene ID" value="LAX5112_04869"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="52"/>
            <end position="75"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77310.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="82" mass="8987" checksum="47F30EDD70335CDB" modified="2015-12-09" version="1">MSDNSKRPAVQTIVIALVLTGAVTAAAYYTWIYANIGARTYAKGTLLTDMRFFVGLLAVFLALTFADRIIGFIVARIRGRKT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASV4</accession>
    <name>A0A0M7ASV4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Decaheme c-type cytochrome, DmsE family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_04880</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000033">
        <property type="protein sequence ID" value="CTQ77340.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04880"/>
    <dbReference type="EnsemblBacteria" id="CTQ77340">
        <property type="protein sequence ID" value="CTQ77340"/>
        <property type="gene ID" value="LAX5112_04880"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011989">
        <property type="entry name" value="ARM-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023155">
        <property type="entry name" value="Cyt_c-552/4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036280">
        <property type="entry name" value="Multihaem_cyt_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010177">
        <property type="entry name" value="Paired_CXXCH_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13435">
        <property type="entry name" value="Cytochrome_C554"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09699">
        <property type="entry name" value="Paired_CXXCH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="SSF48371"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="SSF48452"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48695">
        <property type="entry name" value="SSF48695"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cytochrome_C554" evidence="2">
        <location>
            <begin position="82"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="domain" description="Cytochrome_C554" evidence="2">
        <location>
            <begin position="211"/>
            <end position="250"/>
        </location>
    </feature>
    <feature type="domain" description="Paired_CXXCH_1" evidence="1">
        <location>
            <begin position="356"/>
            <end position="383"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF09699"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13435"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ77340.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="696" mass="76935" checksum="0FA87F057CD1BC8E" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AT92</accession>
    <name>A0A0M7AT92_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Inosose dehydratase</fullName>
            <ecNumber evidence="2">4.2.1.44</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">iolE_2</name>
        <name evidence="2" type="ORF">LAX5112_05029</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="4.2.1.44" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000043">
        <property type="protein sequence ID" value="CTQ77721.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_05029"/>
    <dbReference type="EnsemblBacteria" id="CTQ77721">
        <property type="protein sequence ID" value="CTQ77721"/>
        <property type="gene ID" value="LAX5112_05029"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050114">
        <property type="term" value="F:myo-inosose-2 dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036237">
        <property type="entry name" value="Xyl_isomerase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013022">
        <property type="entry name" value="Xyl_isomerase-like_TIM-brl"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01261">
        <property type="entry name" value="AP_endonuc_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51658">
        <property type="entry name" value="SSF51658"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AP_endonuc_2" evidence="1">
        <location>
            <begin position="25"/>
            <end position="234"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01261"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77721.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="265" mass="29618" checksum="0275AF6D52080DFD" modified="2015-12-09" version="1">MAVHPAYDTAFDGFAAPEVRGNPVARQAWAVDQVKQALTASRNLGITAHATFSGALAWPYIYPWPQRPAGLVETAFDELAKRWRPILDYADDMGVDVCYEIHPGEDLHDGATYEMFLDRVDNHARAKMLYDPSHYVLQCLDYLDNIDIYKDRIGMFHVKDAEFNPTGRQGVYSGYQPWVDRAGRFRSLGDGQVDFGAIFSKMAANDFDGWAVVEWECCLKHPEDGAREGAQFVADHIIRVTEKAFDDFAGGGTDEAANRKMLGIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZLX5</accession>
    <name>A0A0M6ZLX5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Sarcosine oxidase, gamma subunit family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00056</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63759.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670114.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00056"/>
    <dbReference type="EnsemblBacteria" id="CTQ63759">
        <property type="protein sequence ID" value="CTQ63759"/>
        <property type="gene ID" value="LAX5112_00056"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1360.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007375">
        <property type="entry name" value="SoxG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027266">
        <property type="entry name" value="TrmE/GcvT_dom1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04268">
        <property type="entry name" value="SoxG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ63759.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="191" mass="20586" checksum="1902849DC6BAD7C7" modified="2015-12-09" version="1">MSDLLASDVITPDAGETPLLSLPDVSILKAAPMTRLSLRLREAAIPAAGEAFGAKLPVTPLGVETSAKRAALWMGPDEWTLLAPEDELQAVFDGIEAKLDGQPHSLTDISHRSEALIVSGPKANWLLNTGIFIDFSLEKFPVGTVTRTIFHKSPVMIWRTGEDTFVVEAWISFMDYVAGILVESAEELAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZM32</accession>
    <name>A0A0M6ZM32_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Adenylate cyclase 1</fullName>
            <ecNumber evidence="3">4.6.1.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">cyaA_1</name>
        <name evidence="3" type="ORF">LAX5112_00076</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="4.6.1.1" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63818.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670124.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00076"/>
    <dbReference type="EnsemblBacteria" id="CTQ63818">
        <property type="protein sequence ID" value="CTQ63818"/>
        <property type="gene ID" value="LAX5112_00076"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004016">
        <property type="term" value="F:adenylate cyclase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009190">
        <property type="term" value="P:cyclic nucleotide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035556">
        <property type="term" value="P:intracellular signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07302">
        <property type="entry name" value="CHD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1230">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001054">
        <property type="entry name" value="A/G_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007890">
        <property type="entry name" value="CHASE2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05226">
        <property type="entry name" value="CHASE2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00211">
        <property type="entry name" value="Guanylate_cyc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01080">
        <property type="entry name" value="CHASE2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00044">
        <property type="entry name" value="CYCc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50125">
        <property type="entry name" value="GUANYLATE_CYCLASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0456">Lyase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="326"/>
            <end position="345"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="352"/>
            <end position="373"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="379"/>
            <end position="398"/>
        </location>
    </feature>
    <feature type="domain" description="Guanylate cyclase" evidence="2">
        <location>
            <begin position="439"/>
            <end position="568"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ63818.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="645" mass="68413" checksum="FA7BA4166FBDF92A" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZMP4</accession>
    <name>A0A0M6ZMP4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Methyltransferase</fullName>
            <ecNumber evidence="4">2.1.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">LAX5112_00009</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the trimethylamine methyltransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.-" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63627.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670077.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00009"/>
    <dbReference type="EnsemblBacteria" id="CTQ63627">
        <property type="protein sequence ID" value="CTQ63627"/>
        <property type="gene ID" value="LAX5112_00009"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015948">
        <property type="term" value="P:methanogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.480">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038601">
        <property type="entry name" value="MttB-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010426">
        <property type="entry name" value="MTTB_MeTrfase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06253">
        <property type="entry name" value="MTTB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF037567">
        <property type="entry name" value="MTTB_MeTrfase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 6" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4 6" id="KW-0808">Transferase</keyword>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007137"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRNR" id="PIRNR037567"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ63627.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="513" mass="55241" checksum="848AEEE3A932A5FA" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZNY9</accession>
    <name>A0A0M6ZNY9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Quinone oxidoreductase 1</fullName>
            <ecNumber evidence="2">1.6.5.5</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">qorA</name>
        <name evidence="2" type="ORF">LAX5112_00308</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.6.5.5" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64468.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670283.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00308"/>
    <dbReference type="EnsemblBacteria" id="CTQ64468">
        <property type="protein sequence ID" value="CTQ64468"/>
        <property type="gene ID" value="LAX5112_00308"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003960">
        <property type="term" value="F:NADPH:quinone reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013149">
        <property type="entry name" value="ADH-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013154">
        <property type="entry name" value="ADH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011032">
        <property type="entry name" value="GroES-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020843">
        <property type="entry name" value="PKS_ER"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08240">
        <property type="entry name" value="ADH_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00107">
        <property type="entry name" value="ADH_zinc_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00829">
        <property type="entry name" value="PKS_ER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50129">
        <property type="entry name" value="SSF50129"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PKS_ER" evidence="1">
        <location>
            <begin position="11"/>
            <end position="323"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64468.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="325" mass="34677" checksum="08102371D78562F4" modified="2015-12-09" version="1">MVQAIRVHETGSAEVLTWEHVELGEPGPGEARIRHTAIGLNFIDTYFRSGLYPAPDGVPFIPGNEGAGIVQTVGDGVSHIKPGDRVAYVGPLGAYAQERIIPADRLVVIPDGIEDKAAAGMMLKGMTAQYLLRQTFNVGPETTLLFHAAAGGVGLIAGQWAAHLGATVIGTAGSQEKVDLAKANGYQHVINYRTENFVERVKEITGGKGCDVVYDSVGKDTYPGSLDCLKPRGLWVSFGQSSGPIQDFNLALLAQKGSLFATRPTLFSYIATREQLETTSGDLFDVVSKGIVKIAVNQEYRLADAVQAHTDLEGRKTTGTTVLIP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZP25</accession>
    <name>A0A0M6ZP25_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Murein hydrolase activator NlpD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">nlpD</name>
        <name evidence="4" type="ORF">LAX5112_00180</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64107.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00180"/>
    <dbReference type="EnsemblBacteria" id="CTQ64107">
        <property type="protein sequence ID" value="CTQ64107"/>
        <property type="gene ID" value="LAX5112_00180"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00118">
        <property type="entry name" value="LysM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.70.70.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.350.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011055">
        <property type="entry name" value="Dup_hybrid_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018392">
        <property type="entry name" value="LysM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036779">
        <property type="entry name" value="LysM_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016047">
        <property type="entry name" value="Peptidase_M23"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01476">
        <property type="entry name" value="LysM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01551">
        <property type="entry name" value="Peptidase_M23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00257">
        <property type="entry name" value="LysM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51261">
        <property type="entry name" value="SSF51261"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54106">
        <property type="entry name" value="SSF54106"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51782">
        <property type="entry name" value="LYSM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005808866" evidence="2">
        <location>
            <begin position="33"/>
            <end position="477"/>
        </location>
    </feature>
    <feature type="domain" description="LysM" evidence="3">
        <location>
            <begin position="140"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="55"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="282"/>
            <end position="302"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="55"/>
            <end position="94"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51782"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ64107.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="477" mass="49435" checksum="6513B71C04AA3D0F" modified="2015-12-09" version="1">MKKRMRFLRQDLLGKVATVTLGAAALAGCSSATERFGPNDIYTASTANQKEILTGSAPSQPSYQDIINGTGGTTAGLPQNTSSPVSTGSIPRQPAPATSPAVVSAPIAPSITSAQVPAVPAPETLAAGNDWKGWSSAGGTQVKARQGDTLASISRRYGVPIQAVASVNGLQSRSSVQAGQSLIIPTYVYSDRNGSTSTTDGETRAVQLPTVSRTENVVTGSIPNVSRAAPRPDRKPYAQPTFAQVTQSTPAIVAAPVVPVGALPKSKPQEVSAPIVTASVPQTVSGGGSSVPSPKRQPDRIVSTNRSNDSIQVETTPIAAPDSAADVPVKTEAAPEKPIEVASIQPQADEPVAKFRWPVRGRIISDFGAKPGGGRNEGVNLAVPEGTPVKAAGDGSVIYAGNELKGYGNLVLVRHDEGWVSAYAHNSVLNVKRGDTVRRGDPVALAGATGSVNQPQVHFELRQGNKPVDPLKYLPRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZP78</accession>
    <name>A0A0M6ZP78_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Carboxylate/amino acid/amine transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_00134</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63976.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670159.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00134"/>
    <dbReference type="EnsemblBacteria" id="CTQ63976">
        <property type="protein sequence ID" value="CTQ63976"/>
        <property type="gene ID" value="LAX5112_00134"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000620">
        <property type="entry name" value="EamA_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00892">
        <property type="entry name" value="EamA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="42"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="76"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="105"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="131"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="162"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="192"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="240"/>
            <end position="257"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="269"/>
            <end position="288"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="294"/>
            <end position="312"/>
        </location>
    </feature>
    <feature type="domain" description="EamA" evidence="2">
        <location>
            <begin position="16"/>
            <end position="147"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ63976.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="330" mass="35690" checksum="78700638EFF8AB4E" modified="2015-12-09" version="1">MTLLSSSTPLSRPAAGIVFVLAGVTAISVNDMLIKQLSGGYPLHQMIFVRSLIGLIFMLFLVHFEGGWTILKTRRPILHVVRCVMVLIANMSFFTALAVVPLADATALFFVAPLLITLLSIPILGEKVGPWRLGAVGIGFCGVVLMMQPWKTDLQIEGGRVVLVLPVIGAAAYAMMQVLTRKLGVASKASALAVYLQSGFLIVSIGFFLAAGDGRYADSFDNASLQFLLRAWVWPPEEDVYWFVALGLCSGVVGYTMSQAYRIADAATIAPFEYIGLPLAVFWGWLMFGELPAPVVFGGIGLIVGGGLLVFLREHQKQRKLALATKIGRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPT9</accession>
    <name>A0A0M6ZPT9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00236</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64262.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ64262">
        <property type="protein sequence ID" value="CTQ64262"/>
        <property type="gene ID" value="LAX5112_00236"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005808885" evidence="1">
        <location>
            <begin position="24"/>
            <end position="156"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64262.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="156" mass="17535" checksum="2BB99E6DAF4E1A8C" modified="2015-12-09" version="1">MIQKTVMAAALALACTATTQTYADQLEPGDTYIISRDGHRIFRGSHQIYNRMAEGLVEVTYCQRSYWVRYATVAWTQIEVDRGYELRVEYNRGKGWRPICANPEEQVTLADLGINEDPRLIIQEDGPLVNPISRFAAISKSFGSGDKAKGSYHATE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQ90</accession>
    <name>A0A0M6ZQ90_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Serine-type D-Ala-D-Ala carboxypeptidase</fullName>
            <ecNumber evidence="4">3.4.16.4</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="primary">dacC_1</name>
        <name evidence="14" type="ORF">LAX5112_00283</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2">Cell wall biogenesis; peptidoglycan biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 12">Belongs to the peptidase S11 family.</text>
    </comment>
    <dbReference type="EC" id="3.4.16.4" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64401.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670320.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00283"/>
    <dbReference type="EnsemblBacteria" id="CTQ64401">
        <property type="protein sequence ID" value="CTQ64401"/>
        <property type="gene ID" value="LAX5112_00283"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00219"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009002">
        <property type="term" value="F:serine-type D-Ala-D-Ala carboxypeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008360">
        <property type="term" value="P:regulation of cell shape"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.410.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.710.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012338">
        <property type="entry name" value="Beta-lactam/transpept-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015956">
        <property type="entry name" value="Peniciliin-bd_prot_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018044">
        <property type="entry name" value="Peptidase_S11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012907">
        <property type="entry name" value="Peptidase_S11_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037167">
        <property type="entry name" value="Peptidase_S11_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001967">
        <property type="entry name" value="Peptidase_S11_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07943">
        <property type="entry name" value="PBP5_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00768">
        <property type="entry name" value="Peptidase_S11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00725">
        <property type="entry name" value="DADACBPTASE1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00936">
        <property type="entry name" value="PBP5_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56601">
        <property type="entry name" value="SSF56601"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69189">
        <property type="entry name" value="SSF69189"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 14" id="KW-0121">Carboxypeptidase</keyword>
    <keyword evidence="9" id="KW-0133">Cell shape</keyword>
    <keyword evidence="11" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="8 14" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="10" id="KW-0573">Peptidoglycan synthesis</keyword>
    <keyword evidence="6" id="KW-0645">Protease</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0732">Signal</keyword>
    <feature type="domain" description="PBP5_C" evidence="13">
        <location>
            <begin position="264"/>
            <end position="354"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003217"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004752"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007164"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022645"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU004016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="SMART" id="SM00936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="CTQ64401.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="374" mass="39474" checksum="565905740F0B8C6B" modified="2015-12-09" version="1">MLSAFAIVGVQAEQLTTKAPKALLYEPASGTVLFAKDADVPFAPGALVKVMTAATVFKALSDGELTPDQLCTVSEHAWRTGGAPSGRGATMFAAIKSEISVEDLLKGLLVHNGNDSAIILAECLDGSETAFADRMNALAAEIGMANSNFGNPTGYEEAVSTTTVRDQVRLGEYLVEEHTERYSMFAIPEFTWNNIFQRNKNPLLGEIRNLDGLGGGAHSEDGYSGLGSIDRNGRRIIAAVAGLTSDNHRLVALKEIFEGTWEFYAVKTVFPAGEMVAEGRVFGGVDGTVPLVSEADIDVFLPRGGTLEYRLRVVYQGPLVAPVAAGAPAGELHVIGQDGVVHRAPLVTGASVPEGGLVGKALDSVQELLFGWIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQC3</accession>
    <name>A0A0M6ZQC3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00007</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63623.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670075.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00007"/>
    <dbReference type="EnsemblBacteria" id="CTQ63623">
        <property type="protein sequence ID" value="CTQ63623"/>
        <property type="gene ID" value="LAX5112_00007"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.50.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008928">
        <property type="entry name" value="6-hairpin_glycosidase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012341">
        <property type="entry name" value="6hp_glycosidase-like_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48208">
        <property type="entry name" value="SSF48208"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ63623.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="389" mass="43115" checksum="70C609026EECB165" modified="2015-12-09" version="1">MSSETAHVQKLADDLTRWLTEDALPAWQAGGINSDTGECYETIDLATQQGVPGDRRARVIPRQIYSFLEGARLGWKGPSESIATRLWTWFSDTYRLPDGTFAAAAAMDNTLTDARFDLYNQAFVLFALAHMAQKIPACASSAEEDAKSLVEVLIKNYKHPVIGFREDNPDRIPLRANPHMHLFEAAMAWETVSNDPMWSGMADELAELALTKLIDPVNGGLREFFDLHWGPLPGDEGRILEPGHHFEWAWLLVRWGTSRADADALVAARRLYDIGWTYGIDESRGATFMSINDDFSARDPVARLWGQTEWIKAAIALAGISVGAEREAYTADISLSVAALTAYFEDVPAGLYRDKWHVDGSFEDEAAPASSLYHIVCAISELNAFAKSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQD1</accession>
    <name>A0A0M6ZQD1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">5-hydroxyisourate hydrolase</fullName>
            <shortName evidence="7">HIU hydrolase</shortName>
            <shortName evidence="7">HIUHase</shortName>
            <ecNumber evidence="7">3.5.2.17</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">pucM_1</name>
        <name evidence="9" type="ORF">LAX5112_00306</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Catalyzes the hydrolysis of 5-hydroxyisourate (HIU) to 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline (OHCU).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>5-hydroxyisourate + H2O = 5-hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:23736"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:18072"/>
            <dbReference type="ChEBI" id="CHEBI:58639"/>
            <dbReference type="EC" id="3.5.2.17"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="7">Homotetramer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 7">Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.</text>
    </comment>
    <dbReference type="EC" id="3.5.2.17" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64462.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670281.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00306"/>
    <dbReference type="EnsemblBacteria" id="CTQ64462">
        <property type="protein sequence ID" value="CTQ64462"/>
        <property type="gene ID" value="LAX5112_00306"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033971">
        <property type="term" value="F:hydroxyisourate hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006144">
        <property type="term" value="P:purine nucleobase metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd05822">
        <property type="entry name" value="TLP_HIUase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.180">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014306">
        <property type="entry name" value="Hydroxyisourate_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023418">
        <property type="entry name" value="Thyroxine_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000895">
        <property type="entry name" value="Transthyretin/HIU_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023416">
        <property type="entry name" value="Transthyretin/HIU_hydrolase_d"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036817">
        <property type="entry name" value="Transthyretin/HIU_hydrolase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023419">
        <property type="entry name" value="Transthyretin_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10395">
        <property type="entry name" value="PTHR10395"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00576">
        <property type="entry name" value="Transthyretin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00189">
        <property type="entry name" value="TRNSTHYRETIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49472">
        <property type="entry name" value="SSF49472"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02962">
        <property type="entry name" value="hdxy_isourate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00768">
        <property type="entry name" value="TRANSTHYRETIN_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00769">
        <property type="entry name" value="TRANSTHYRETIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 7 9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4 7" id="KW-0659">Purine metabolism</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TR_THY" evidence="8">
        <location>
            <begin position="4"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="7"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="44"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="113"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00002704"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022631"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR600895-51"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU361270"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00576"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ64462.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="116" mass="12693" checksum="777A7F458A63B38A" modified="2015-12-09" version="1">MGRLTTHVLDTALGVPAKGLRIELWSAGGTPAHISSHVTNDDGRVDSAILSDDVFQTGTYELRFHAGEYLKRTNQTLPDPLFLDIVPIRFGIADANAHYHVPLLLSPFGYSTYRGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQH1</accession>
    <name>A0A0M6ZQH1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Auxin efflux carrier</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">LAX5112_00313</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the auxin efflux carrier (TC 2.A.69) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64481.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00313"/>
    <dbReference type="EnsemblBacteria" id="CTQ64481">
        <property type="protein sequence ID" value="CTQ64481"/>
        <property type="gene ID" value="LAX5112_00313"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1530.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004776">
        <property type="entry name" value="Mem_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038770">
        <property type="entry name" value="Na+/solute_symporter_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03547">
        <property type="entry name" value="Mem_trans"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="20"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="49"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="79"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="113"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="140"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="178"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="212"/>
            <end position="233"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="245"/>
            <end position="265"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="271"/>
            <end position="292"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="304"/>
            <end position="324"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010145"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ64481.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="340" mass="36403" checksum="7CA805A141254857" modified="2015-12-09" version="1">MDLNRPANHKYFESSMQNVISLSLPFFGLIFLGYAAGKIKQIPEAGLGWMNFFVVYLALPALFFRLLSGTPFEELANFAFIAATTFTTYIVFAVAFCIGVVATRGSIAESTILGIAGAYSNVGYMGPGLTLAVLGEDATVPTALILSFDNALMFILAPMMMAVAGAEDQSIADTIKSILWRIFSHPFILATIAGVLAAAFELQQPQAFSTLLTYLSNAAAPCALFAMGVSIAIRPIGRIPIELPIVLAVKLIVHPLLIFMLLMWLGNIDPVWIATAVLMACLPPATNVFVIAQHYGTYVQRASSFVLIGTLVSIVTVTTFIWAITTGALPTGFAEVMRGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQV2</accession>
    <name>A0A0M6ZQV2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Inner membrane protein YidI</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yidI</name>
        <name evidence="2" type="ORF">LAX5112_00526</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65145.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670470.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ65145">
        <property type="protein sequence ID" value="CTQ65145"/>
        <property type="gene ID" value="LAX5112_00526"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="83"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="113"/>
            <end position="142"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65145.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="150" mass="15955" checksum="7A51605067CBAE25" modified="2015-12-09" version="1">MANTRQITRPWVASIGLLFGGCALLIVLFHFGAGPLDPQPTIGQTIGETAADIRQSAVRALKGEPQPEPEAQPWSLDRLLKTLGPILGGVAILLGTLAYVFREDRRLATTAVGIGAFAIGFQLFTWTILMVAGVILLLGIMYNLGSVLGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQX5</accession>
    <name>A0A0M6ZQX5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00523</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65138.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670468.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ65138">
        <property type="protein sequence ID" value="CTQ65138"/>
        <property type="gene ID" value="LAX5112_00523"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025597">
        <property type="entry name" value="DUF4345"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14248">
        <property type="entry name" value="DUF4345"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="9"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="48"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="76"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="106"/>
            <end position="124"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65138.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="138" mass="14907" checksum="5031A9FF03AE95A8" modified="2015-12-09" version="1">MTPDTKQRLFLGIAAAGLTPIALSYGLLPGLTLPWLFGVDAAGINTRHIFRAVMGLYLALAVFWCLGALRPNLRLPALWSLVIFMLGLALGRALSLTVDGMPHPLLTIYMLLEVGFAAIGALLIRQSRSPPGSFRLDH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZS95</accession>
    <name>A0A0M6ZS95_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Flp pilus assembly protein, protease CpaA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_00543</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase A24 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65197.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670483.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00543"/>
    <dbReference type="EnsemblBacteria" id="CTQ65197">
        <property type="protein sequence ID" value="CTQ65197"/>
        <property type="gene ID" value="LAX5112_00543"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004190">
        <property type="term" value="F:aspartic-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000045">
        <property type="entry name" value="Prepilin_IV_endopep_pep"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01478">
        <property type="entry name" value="Peptidase_A24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-0645">Protease</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="27"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="57"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="96"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_A24" evidence="3">
        <location>
            <begin position="8"/>
            <end position="112"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ65197.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="170" mass="18062" checksum="98FD827D3FB17BA7" modified="2015-12-09" version="1">MIEAVVLVLFPMLVAFAGASDLLTMKIGNRVSILLIIGFIVLAAVNGMPVDDWGMHGLGLVVVFLPCFAFFAAGWMGGGDVKLISSVGLWFGFGPILIDFLFLVALLGCVLTLSLVVIRSSLVVLPAPLRGQEWALRLHDAKSGIPYGIAISAAALIVYPRSDWFSMIAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSC7</accession>
    <name>A0A0M6ZSC7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Phosphomannomutase/phosphoglucomutase</fullName>
            <ecNumber evidence="10">5.4.2.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">algC</name>
        <name evidence="10" type="ORF">LAX5112_00554</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the phosphohexose mutase family.</text>
    </comment>
    <dbReference type="EC" id="5.4.2.2" evidence="10"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65227.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670559.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00554"/>
    <dbReference type="EnsemblBacteria" id="CTQ65227">
        <property type="protein sequence ID" value="CTQ65227"/>
        <property type="gene ID" value="LAX5112_00554"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004614">
        <property type="term" value="F:phosphoglucomutase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005844">
        <property type="entry name" value="A-D-PHexomutase_a/b/a-I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016055">
        <property type="entry name" value="A-D-PHexomutase_a/b/a-I/II/III"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005845">
        <property type="entry name" value="A-D-PHexomutase_a/b/a-II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005846">
        <property type="entry name" value="A-D-PHexomutase_a/b/a-III"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005843">
        <property type="entry name" value="A-D-PHexomutase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036900">
        <property type="entry name" value="A-D-PHexomutase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005841">
        <property type="entry name" value="Alpha-D-phosphohexomutase_SF"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02878">
        <property type="entry name" value="PGM_PMM_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02879">
        <property type="entry name" value="PGM_PMM_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02880">
        <property type="entry name" value="PGM_PMM_III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00408">
        <property type="entry name" value="PGM_PMM_IV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00509">
        <property type="entry name" value="PGMPMM"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53738">
        <property type="entry name" value="SSF53738"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55957">
        <property type="entry name" value="SSF55957"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 10" id="KW-0413">Isomerase</keyword>
    <keyword evidence="4" id="KW-0460">Magnesium</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PGM_PMM_I" evidence="7">
        <location>
            <begin position="27"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="domain" description="PGM_PMM_II" evidence="8">
        <location>
            <begin position="176"/>
            <end position="272"/>
        </location>
    </feature>
    <feature type="domain" description="PGM_PMM_III" evidence="9">
        <location>
            <begin position="278"/>
            <end position="391"/>
        </location>
    </feature>
    <feature type="domain" description="PGM_PMM_IV" evidence="6">
        <location>
            <begin position="405"/>
            <end position="486"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010231"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00408"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF02878"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF02879"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF02880"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ65227.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="499" mass="54542" checksum="09CE3EA9EC50A48C" modified="2015-12-09" version="1">MFPKPRPALTPNTYEYETLPLVKPTGFREYDARWLFEKEINLMGMQALGMGIGTLIHERGVRPDIVVGHDFRGYSASIKMAVVNGLLAAGVNVHDIGLALSPMAYFAQFALDVPAVAMITASHNDNGWTGVKMGIDRPLTFGPDEMGRLKEIVLDAAFDLKGGGSYKFVDGFADVYFNELTDRAKLKKPIKVVAACGNGTAGAFAPKILEALGAEVIPLDAELDHTFPRYNPNPEDMKMLHALRDKVLEVDADVGLGFDGDGDRCGVVDNEGEEIFADKVGVMLARDISALHPNSQFVVDVKSTGLFNTDPVLQANGAKTDYFKTGHSYIKRRVTELDAIVGFEKSGHYFFNKPIGRGYDDGLVSAIAILDMLDRNPDKSMADLRRDLPKTWGSPTMSPKCADEVKYDVVDRVVARFKEMHGAGEKIAGQSITDLITVNGIRVVSEDGTWGLVRASSNKPELVVVVESPASEARLHEMFKAVDAVLRENPEVGEYNQTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZT22</accession>
    <name>A0A0M6ZT22_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Acetylornithine deacetylase</fullName>
            <ecNumber evidence="3">3.5.1.16</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">argE_1</name>
        <name evidence="3" type="ORF">LAX5112_00608</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.5.1.16" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65412.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670567.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00608"/>
    <dbReference type="EnsemblBacteria" id="CTQ65412">
        <property type="protein sequence ID" value="CTQ65412"/>
        <property type="gene ID" value="LAX5112_00608"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008777">
        <property type="term" value="F:acetylornithine deacetylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002933">
        <property type="entry name" value="Peptidase_M20"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011650">
        <property type="entry name" value="Peptidase_M20_dimer"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07687">
        <property type="entry name" value="M20_dimer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01546">
        <property type="entry name" value="Peptidase_M20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="M20_dimer" evidence="2">
        <location>
            <begin position="215"/>
            <end position="358"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07687"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ65412.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="471" mass="52024" checksum="72E2D8E0B6E79237" modified="2015-12-09" version="1">MTKRSAAIEAAAKSFGDGSFQKDLTELVAVKTSSREEEHRSDLMRYLDTEMRKRFEAMGFTVDIHPNDILDRAPFLVAKRIEDPSLPTLFCYGHGDTVPGEEGRWSEDRDPWTLNVAQTQSGPRWYGRGTADNKAQHAINMEAMRHVIDTRGRLGYNATFLIEMAEEMGSPGLYVFCRDNRDMLAADLLIASDGPRFSTDAPDIKLGTRGGLNLRFRLEYREGGHHSGNWGGLLANPAIVLMHALTTLVSRTGEILPPGLKPAHIKNSVRDALAKVTVTSGLDDPEIDPWWGEPGLSGAEKVFGWNTFEVLSFIAGDPEKPQNAVPPFAEAICQIRFVVDTDPDTFLPLIRQHLKDNGFDGITVEPARMSMLRASRLDPEHPAVAWAVTSVEKTTGKPVTVIPNAGGSLPNDIFLNTIGMPTLWVPHSYTGCSQHAPNEHVLPHLMKEGLEMMTGLFWDLGDGFPKDQRSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZT84</accession>
    <name>A0A0M6ZT84_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Sulfate/thiosulfate import ATP-binding protein CysA</fullName>
            <ecNumber evidence="5">3.6.3.25</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">cysA_2</name>
        <name evidence="5" type="ORF">LAX5112_00579</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.6.3.25" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65300.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00579"/>
    <dbReference type="EnsemblBacteria" id="CTQ65300">
        <property type="protein sequence ID" value="CTQ65300"/>
        <property type="gene ID" value="LAX5112_00579"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="6"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="43"/>
            <end position="50"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ65300.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="225" mass="24506" checksum="23A11B69430E845A" modified="2015-12-09" version="1">MNARTLQNQKGLKLENVSVQLDGRLLLELDTTIEPGTVLTVMGESGSGKSSLLDFIAGFLKPDFKATGRVILDGTDVTTVPAQERHIGLMFQSPLLFPHMSVVQNLMFAVPSEIKNRTVRQQLAEEALGAVNLEGFGSKDPAKLSGGQQTRVALMRTLLARPKALLLDEPFSSLDQSRRADVRQKVFSIATERALPVLLVTHDFEDAEVAGGPIYKLETPATEPQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTM5</accession>
    <name>A0A0M6ZTM5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Multidrug resistance protein MdtN</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_00681</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65571.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670626.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00681"/>
    <dbReference type="EnsemblBacteria" id="CTQ65571">
        <property type="protein sequence ID" value="CTQ65571"/>
        <property type="gene ID" value="LAX5112_00681"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032317">
        <property type="entry name" value="HlyD_D23"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006143">
        <property type="entry name" value="RND_pump_MFP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16576">
        <property type="entry name" value="HlyD_D23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01730">
        <property type="entry name" value="RND_mfp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="27"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="domain" description="HlyD_D23" evidence="3">
        <location>
            <begin position="89"/>
            <end position="254"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF16576"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ65571.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="399" mass="43415" checksum="33881145263FEB05" modified="2015-12-09" version="1">MPSHQNTQATGQEYCVEKGRQIMRKGFWIALSFMALLAVAGVVSGLEDTADVNLTSAPQPLPPVSVVDAVIGTHAGAITVFAEVAPRWQVDLRPRISGVVSNQTPPALAGSRVSKGDVLLQLEDAPYLANVADARSAYESSKLDLRKAQNKHRIAMKDWTAAKPGETPPEMAVHLPQIHVAERALKATEARVAASEYDLRSTTLRAPFDGIVTRRNVSPGATVNEGDVLFQILDDSLLDTQASVGPHEWALLSKDWTDLTVGVFDERGVKIGTAGIRESGGFLDPQSRKHQLFLEVKPLEEGRILPGAFVELHLPVRPIGNTLRIPESALTQNGFVWHVDRGNRLQRFAAQSLFRDKGEVVVAAPEELAQETGLRIVVFPMSAFLPGRKVAPMDLEQSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTP8</accession>
    <name>A0A0M6ZTP8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Hemin transport system permease protein HmuU</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">hmuU_1</name>
        <name evidence="8" type="ORF">LAX5112_00635</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65460.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670590.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00635"/>
    <dbReference type="EnsemblBacteria" id="CTQ65460">
        <property type="protein sequence ID" value="CTQ65460"/>
        <property type="gene ID" value="LAX5112_00635"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3470.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037294">
        <property type="entry name" value="ABC_BtuC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000522">
        <property type="entry name" value="ABC_transptr_permease_BtuC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30472">
        <property type="entry name" value="PTHR30472"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01032">
        <property type="entry name" value="FecCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81345">
        <property type="entry name" value="SSF81345"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="21"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="78"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="110"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="133"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="168"/>
            <end position="188"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="218"/>
            <end position="237"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="257"/>
            <end position="287"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="299"/>
            <end position="321"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="327"/>
            <end position="345"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007935"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ65460.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="351" mass="36671" checksum="47E87BBFF61681DF" modified="2015-12-09" version="1">MSETRTVQAKSLLSEKRQITGLGGLVLLLVSLSFAVSVGAVQIELGTVWGVFLNKLSPGMIEQTWSQGREAIVWEIRFPRALLAMMVGAGLAIVGASLQAVTRNPLADPHLLGISSGGAFGAILALLHTGLFIGLLTVPLFAFLGALAATAIVLGVSRFADATSADRLVLAGVAVSFIVMAAANGLIFLGDPRATHTVVFWMLGGLGLAQWSQLIYPFVILLACGAWLLSQAAALNAMTVGDETASTLGIPVARFRLIVFVVGALITGVMVAFSGIIGFVGLMVPHVVRLLVGGDYRRVLLGSALIGAIFLLWADIAARTIMAPEDMPIGVVTGLVGGVFFVWLLRGKRAT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZU49</accession>
    <name>A0A0M6ZU49_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Lactose transport system permease protein LacF</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">lacF_3</name>
        <name evidence="7" type="ORF">LAX5112_00931</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66268.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008189224.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00931"/>
    <dbReference type="EnsemblBacteria" id="CTQ66268">
        <property type="protein sequence ID" value="CTQ66268"/>
        <property type="gene ID" value="LAX5112_00931"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="75"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="158"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="203"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="264"/>
            <end position="288"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="71"/>
            <end position="286"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ66268.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="295" mass="33602" checksum="591D9E54259461A4" modified="2015-12-09" version="1">MQTLRLKRDWIYGWLLLLPALVFLFAFTHIPAVTTLLNSFFSTPRGRRPAKFIGLDNYDRMINDAVFWKVLWNNLWFAIGTIPVSVALAIVMALWVNDKLAGRSFVRMAYFTPTVLPLIAVANIWLFFYTPGFGLFDQITGFLFGWPASNYLGNPETALNAIIVVTVWKEAGFFMIFYLAALQAIPVSLKEAAQIEGAGRWTIFWRITFPLLMPTTLFVCVNAVINSFRLVDHIFILTDGGPDNASALLLFYIYEVAFRFWETAYGATLTVALLVLLSLLAIGQFFFFDRKVHYK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZU55</accession>
    <name>A0A0M6ZU55_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Hemin transport protein HemS</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">hemS</name>
        <name evidence="3" type="ORF">LAX5112_00695</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65610.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670830.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00695"/>
    <dbReference type="EnsemblBacteria" id="CTQ65610">
        <property type="protein sequence ID" value="CTQ65610"/>
        <property type="gene ID" value="LAX5112_00695"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006826">
        <property type="term" value="P:iron ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007845">
        <property type="entry name" value="HemS/ChuX_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05171">
        <property type="entry name" value="HemS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HemS" evidence="2">
        <location>
            <begin position="37"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="domain" description="HemS" evidence="2">
        <location>
            <begin position="218"/>
            <end position="349"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF05171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ65610.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="362" mass="40459" checksum="D27CC3B1F7675EFC" modified="2015-12-09" version="1">MTADGLESASRPTAAEIRKARAHAPKMRERDLARTLGISEAELVASFVGHGTRRIDPKFDDLFAGLQNVGPVMALTRNESAVHEKIGEFEKFINGKRAALMLGEQIDTRMFPASWVHGFAVEKIEGEDVRRSLQFFDAHGDAVQKIHARPETNTNAWDQLVELLTLPDQQPEILPDVTPAPVFSRKLPTVHAEMQLRDRWQSMTDPHQFHGLLKDLELDRLSAFELAGESWAWPLDKGSVPALLRLAASEHIPIMCFVGNRGCIQIHSGQIANVLEKGPWINIMDRTFHLHLRTDHIHDVWAVRKPADVGHVTSIEAYDSDGQQIIQFFGVRGEGNAERSDWRGLAENLPKLDHAITLGAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUJ6</accession>
    <name>A0A0M6ZUJ6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Gas vesicle protein GvpN</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00821</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65967.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670728.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00821"/>
    <dbReference type="EnsemblBacteria" id="CTQ65967">
        <property type="protein sequence ID" value="CTQ65967"/>
        <property type="gene ID" value="LAX5112_00821"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011704">
        <property type="entry name" value="ATPase_dyneun-rel_AAA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07728">
        <property type="entry name" value="AAA_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA" evidence="1">
        <location>
            <begin position="34"/>
            <end position="200"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65967.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="294" mass="32671" checksum="6A99B9B68D7690B0" modified="2015-12-09" version="1">MTTQTKDTLAEALAGTGYVADDGLAMALLLTEMLNRPLLLEGEAGVGKTEVAKALAKLDNTDLIRLQCYEGLDRSDAIYEWNYQRQLLAIKAREGSGDNAETVEEAVFSEKYLLERPLLAAIRQDKAPVLLIDEVDRADEEFEAFLLELLSDFQVSIPELGTIEAKSIPRVILTSNGTRELSDALRRRCLYHYVDYPDPSREARILLSRVEGLDTALALQIAELMGKLRKEDLTKVPGVAETIDWAAALVGLGTKNLHERRETVFDTLVCVLKTREDQARITPEVTDRLLGKVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVB1</accession>
    <name>A0A0M6ZVB1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Long-chain-fatty-acid--CoA ligase FadD13</fullName>
            <ecNumber evidence="4">6.2.1.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_00916</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="6.2.1.3" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66227.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670859.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00916"/>
    <dbReference type="EnsemblBacteria" id="CTQ66227">
        <property type="protein sequence ID" value="CTQ66227"/>
        <property type="gene ID" value="LAX5112_00916"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004467">
        <property type="term" value="F:long-chain fatty acid-CoA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12780">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025110">
        <property type="entry name" value="AMP-bd_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045851">
        <property type="entry name" value="AMP-bd_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020845">
        <property type="entry name" value="AMP-binding_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000873">
        <property type="entry name" value="AMP-dep_Synth/Lig"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042099">
        <property type="entry name" value="ANL_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00501">
        <property type="entry name" value="AMP-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13193">
        <property type="entry name" value="AMP-binding_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00455">
        <property type="entry name" value="AMP_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0007">Acetylation</keyword>
    <keyword evidence="4" id="KW-0436">Ligase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AMP-binding" evidence="2">
        <location>
            <begin position="10"/>
            <end position="409"/>
        </location>
    </feature>
    <feature type="domain" description="AMP-binding_C" evidence="3">
        <location>
            <begin position="419"/>
            <end position="494"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022990"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF13193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ66227.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="514" mass="55268" checksum="B86721D52B7D52B9" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZW53</accession>
    <name>A0A0M6ZW53_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">N-acylneuraminate cytidylyltransferase</fullName>
            <ecNumber evidence="2">2.7.7.43</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">neuA</name>
        <name evidence="2" type="ORF">LAX5112_00970</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.7.7.43" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66442.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670886.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00970"/>
    <dbReference type="EnsemblBacteria" id="CTQ66442">
        <property type="protein sequence ID" value="CTQ66442"/>
        <property type="gene ID" value="LAX5112_00970"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008781">
        <property type="term" value="F:N-acylneuraminate cytidylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003329">
        <property type="entry name" value="Cytidylyl_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02348">
        <property type="entry name" value="CTP_transf_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="151"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="152"/>
            <end position="170"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66442.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="229" mass="24546" checksum="4A97FE1B59CA4CD5" modified="2015-12-09" version="1">MERVAAIIPARGGSKGIPGKNIKPFLGVPLVAHAVKAALGAKTISDVIVSSDDDAILRVAREYGAAALKRPDNISGDEASSESAVLHAISENDACQAADTVVFLQCTSPLTTSEEIDQVVTARAEMDADTAFSVVEVHAFLWQIEADGTGRGINHDASKPRQRRQDRPKEFRETGAIYALRKDGFVPAGVRFFGRSIPVVLPDAIEIDLDTLRDWLALEAYARAAGHQS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZX01</accession>
    <name>A0A0M6ZX01_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01304</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67275.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671130.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67275">
        <property type="protein sequence ID" value="CTQ67275"/>
        <property type="gene ID" value="LAX5112_01304"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67275.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="84" mass="9550" checksum="36EAC4057038F22A" modified="2015-12-09" version="1">MTLPSENANPDETIEMLETSDRRLGIMCSHCARFRYLKLTNYALEDTLSSLTRSLKCSRCGSEEVEAVAVERDDKTGYWPAERS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZX75</accession>
    <name>A0A0M6ZX75_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Phosphate-import protein PhnD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">phnD_2</name>
        <name evidence="4" type="ORF">LAX5112_01083</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the phosphate/phosphite/phosphonate binding protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66762.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008192947.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01083"/>
    <dbReference type="EnsemblBacteria" id="CTQ66762">
        <property type="protein sequence ID" value="CTQ66762"/>
        <property type="gene ID" value="LAX5112_01083"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015716">
        <property type="term" value="P:organic phosphonate transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005770">
        <property type="entry name" value="PhnD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017797">
        <property type="entry name" value="Phosphnate-bd"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01098">
        <property type="entry name" value="3A0109s03R"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03431">
        <property type="entry name" value="PhnD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809029" evidence="3">
        <location>
            <begin position="26"/>
            <end position="305"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007162"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ66762.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="305" mass="32474" checksum="1530D1751E08E2DD" modified="2015-12-09" version="1">MKLVSKVAALAAVSMIALNATSAVAEEITEFRIGILGGENASDRLRAYTCLEEKTADLLGVPVKLFAPADYNGVIEGLLGGNLDMAWLGASSYAKVYLTDPEAVDPVLVKVNVDGGYGYYSIGFARVDNEINSLEDMKGKVFGFGDPNSTSGYLIPSIAIPQEGYSMAPGEYFGDVKFTGGHEQTIVAVSNGDIDAGVTWADGLGEWEDGYNSGALRKASDAGLVDMTELREIWRSPVIPEGPIVLSKKLPEDVKIKMTALMASLNSLDPECAYGVAAGETKGFMPITHEAYVNIVEARKAKNKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXE6</accession>
    <name>A0A0M6ZXE6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Type VI secretion system Vgr family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01126</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the VgrG protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66876.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670982.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01126"/>
    <dbReference type="EnsemblBacteria" id="CTQ66876">
        <property type="protein sequence ID" value="CTQ66876"/>
        <property type="gene ID" value="LAX5112_01126"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.230">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006531">
        <property type="entry name" value="Gp5/Vgr_OB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017847">
        <property type="entry name" value="T6SS_RhsGE_Vgr_subset"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006533">
        <property type="entry name" value="T6SS_Vgr_RhsGE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037026">
        <property type="entry name" value="Vgr_OB-fold_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04717">
        <property type="entry name" value="Phage_base_V"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01646">
        <property type="entry name" value="vgr_GE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03361">
        <property type="entry name" value="VI_Rhs_Vgr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Phage_base_V" evidence="2">
        <location>
            <begin position="408"/>
            <end position="473"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005558"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF04717"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ66876.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="509" mass="56661" checksum="D302F17EE7622A5B" modified="2015-12-09" version="1">MSSEAMQGKMSITLPGVSSSDVYVEALHGVEALTDGYRFTTDIVSKDPIKLPDMMGKAATLTLEMGEEKMEAQGVIEGAETRDPTPNREFCYRFVIEPELSMLRHSAQNQVYGTDKDVTVIDILTSELSDANKKNSNTSSSRVPRQIQYDMLPSSGDYPKLHFVMQYREHDLNFLKRMCERFGIFFSFDHSSDKEKVVFGDRKEHFTKLSGKQITEELSYRSKEQVMGTGDFGIWSFNQKFITQSGTVALREYNEETPKVDLFVSQDASFPGQGITTRYGEHYATVSEGNFIAKRRVELVETERQQFVGDSNIPLLRPGYFFQLKDHPIRDLDGLYIVTEVTHSCVNTTPLGFSSADMTPEPYRNRFVCVPFDNGFRPSIVTPKPSIPGYISAVIDGETEGKRAELDSAGRYRVRILDEESGLSQGKASYVVRKMEPYGGGDGYGSHSTLLIGTEVLLGFLHGDPDRPVILGAVSNGEQVNPVTATNQNVAHRTRTASGIIMQISDGSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXL0</accession>
    <name>A0A0M6ZXL0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Leucine/isoleucine/valine transporter permease subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_01181</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67021.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671024.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01181"/>
    <dbReference type="EnsemblBacteria" id="CTQ67021">
        <property type="protein sequence ID" value="CTQ67021"/>
        <property type="gene ID" value="LAX5112_01181"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015658">
        <property type="term" value="F:branched-chain amino acid transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06581">
        <property type="entry name" value="TM_PBP1_LivM_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001851">
        <property type="entry name" value="ABC_transp_permease"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043428">
        <property type="entry name" value="LivM-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30482">
        <property type="entry name" value="PTHR30482"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02653">
        <property type="entry name" value="BPD_transp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="21"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="44"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="75"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="98"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="134"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="183"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="232"/>
            <end position="251"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="271"/>
            <end position="293"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="305"/>
            <end position="335"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="347"/>
            <end position="369"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="390"/>
            <end position="408"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ67021.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="420" mass="44543" checksum="AD88284355C9F78C" modified="2015-12-09" version="1">MTDTLSISLAPSQSEKFRTRVLPFLILAAVLVAIPLTGPSRTTYSLLNAIGINMVFALSYNMLLGRAGLLSFGHAVYFGLGGYAAMHAMQAIEAGTGLWSMFPVFALPLVGFAGGALAGAVIGWPSCRRAGIPFAMISLGIAELVAAAGFMFTSLFGGEEGVSGDRMNGAEVFGLSLGPINEVYWFIAAWTLIGTIAMFAFTRTPLGKMGEAVRDNPERVEFVGYDPQRVRYLIFIFAGGFAGLAGGMAAVNYEIFTPETLSVIPSGFVLLMAYVGGIRYFAGPMLGAVLLTYMQSNLSDFTEAWLLYLGLLFMMIVMFAPSGLAGILVSVLHGVQSSDRGEILGRWARYAAGALLAFVGIVITIEVAVRESSGFGEVFEPFGFALAPDNPVTWLLALGLVGLGGWIMRSSGSDKEEALS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXS4</accession>
    <name>A0A0M6ZXS4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Long-chain-fatty-acid--CoA ligase</fullName>
            <ecNumber evidence="4">6.2.1.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">lcfB_1</name>
        <name evidence="4" type="ORF">LAX5112_01168</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="6.2.1.3" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66986.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671014.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01168"/>
    <dbReference type="EnsemblBacteria" id="CTQ66986">
        <property type="protein sequence ID" value="CTQ66986"/>
        <property type="gene ID" value="LAX5112_01168"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004467">
        <property type="term" value="F:long-chain fatty acid-CoA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12780">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025110">
        <property type="entry name" value="AMP-bd_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045851">
        <property type="entry name" value="AMP-bd_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020845">
        <property type="entry name" value="AMP-binding_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000873">
        <property type="entry name" value="AMP-dep_Synth/Lig"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042099">
        <property type="entry name" value="ANL_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00501">
        <property type="entry name" value="AMP-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13193">
        <property type="entry name" value="AMP-binding_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00455">
        <property type="entry name" value="AMP_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0007">Acetylation</keyword>
    <keyword evidence="4" id="KW-0436">Ligase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AMP-binding" evidence="2">
        <location>
            <begin position="24"/>
            <end position="404"/>
        </location>
    </feature>
    <feature type="domain" description="AMP-binding_C" evidence="3">
        <location>
            <begin position="413"/>
            <end position="488"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022990"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF13193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ66986.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="507" mass="54403" checksum="89E31C7FF1F5782F" modified="2015-12-09" version="1">MANPLFDQLFGKHAGKTTPFLHLTSGATLTHAEFLGQAAQIAHALTEFGLKPGDRLAAQIEKSPEALALYAACAQAGVIFLPLNTAYTVDELTYFIENSGATLVVCGARSEAALTPIATGLGAKLATLNADGSGSLTETAKSKPATFDVVDRSADDLAAFLYTSGTTGRSKGAMLTQANLLSNAETLTNYWKFTDADVLLHALPIFHTHGLFVATNVMLAAGGSMIFLPKFDLDAMIANLPKATSMMGVPTFYTRLLDDARFTKDLTSHMRLFISGSAPLLAETHVRFEERTGHRILERYGMTETNMNTSNPYDSERRPGTVGFPLPGVDLKITNPDSGVTLPDGEVGQIEVRGANVFKGYWQMPEKTAAELRDDGFFITGDLGKIDADGYVHIVGRNKDLIISGGYNIYPKEIELILDEQPGVLESAVIGVPHTDFGETVVGLIVPEAGAKPDLDAIQAAVSDGLARFKHPRKLIVVDTLPRNTMGKVQKNILRDTYADLFAPVAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYC5</accession>
    <name>A0A0M6ZYC5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcriptional repressor DicA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01266</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67206.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671100.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01266"/>
    <dbReference type="EnsemblBacteria" id="CTQ67206">
        <property type="protein sequence ID" value="CTQ67206"/>
        <property type="gene ID" value="LAX5112_01266"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01381">
        <property type="entry name" value="HTH_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00530">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="1">
        <location>
            <begin position="18"/>
            <end position="72"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67206.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="136" mass="14977" checksum="047F2560D000B4EA" modified="2015-12-09" version="1">MPSKKSPNPTDIHVGSRVRLRRMMLAMSQEKLGEALGITFQQIQKYEKGTNRIGASRLQHISTVLKAPVSFFFEGLPEGENTTVADINILATRSPGAMKLLQVFNSLDTQGQQGLLRIAETIDAMRAPQEQVLEAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYL9</accession>
    <name>A0A0M6ZYL9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01380</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67417.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671184.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01380"/>
    <dbReference type="EnsemblBacteria" id="CTQ67417">
        <property type="protein sequence ID" value="CTQ67417"/>
        <property type="gene ID" value="LAX5112_01380"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011928">
        <property type="entry name" value="Phage_phiJL001_Gp84"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018964">
        <property type="entry name" value="Phage_phiJL001_Gp84_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019228">
        <property type="entry name" value="Phage_phiJL001_Gp84_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09931">
        <property type="entry name" value="DUF2163"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09356">
        <property type="entry name" value="Phage_BR0599"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02218">
        <property type="entry name" value="phg_TIGR02218"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF2163" evidence="2">
        <location>
            <begin position="1"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="domain" description="Phage_BR0599" evidence="1">
        <location>
            <begin position="194"/>
            <end position="276"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF09356"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF09931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ67417.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="296" mass="31917" checksum="C130882996E877C9" modified="2015-12-09" version="1">MKTLPQNLAAHLAGRITTLATCWIVTRADGVRLGFTDHDRALSVEGVVCQPQNGLAPSAMSDGPEFATGGGDVSGTLESSALLETDLEAGLWDNAGVRVFLVNWQTPSDHVLLRRARIGEVGRAGSVFRAELRGLAHLLESRQGRVFARICDADLGDSRCKVDMTNPAYQATATVTVAQREWLRITGLEAYANGWFSRGRVKVLTGPLAGFASEVASHRQEEDKSVLSLFQPAPEALAPGTEIEVRAGCPKDLETCRTKFANHLNYLGFPHMPGSDFALSYPNRNTGLNDGSARVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZ62</accession>
    <name>A0A0M6ZZ62_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 7 8">Protein RecA</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7 8">Recombinase A</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7 12" type="primary">recA</name>
        <name evidence="12" type="ORF">LAX5112_01642</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 7 9">Belongs to the RecA family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68118.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008193049.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01642"/>
    <dbReference type="EnsemblBacteria" id="CTQ68118">
        <property type="protein sequence ID" value="CTQ68118"/>
        <property type="gene ID" value="LAX5112_01642"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140664">
        <property type="term" value="F:ATP-dependent DNA damage sensor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003684">
        <property type="term" value="F:damaged DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003697">
        <property type="term" value="F:single-stranded DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009432">
        <property type="term" value="P:SOS response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00983">
        <property type="entry name" value="recA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00268">
        <property type="entry name" value="RecA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013765">
        <property type="entry name" value="DNA_recomb/repair_RecA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020584">
        <property type="entry name" value="DNA_recomb/repair_RecA_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020588">
        <property type="entry name" value="RecA_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023400">
        <property type="entry name" value="RecA_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020587">
        <property type="entry name" value="RecA_monomer-monomer_interface"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45900">
        <property type="entry name" value="PTHR45900"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00154">
        <property type="entry name" value="RecA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00142">
        <property type="entry name" value="RECA"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54752">
        <property type="entry name" value="SSF54752"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02012">
        <property type="entry name" value="tigrfam_recA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00321">
        <property type="entry name" value="RECA_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50162">
        <property type="entry name" value="RECA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50163">
        <property type="entry name" value="RECA_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7 9" id="KW-0227">DNA damage</keyword>
    <keyword evidence="6 7 9" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="7 8" id="KW-0234">DNA repair</keyword>
    <keyword evidence="5 7 9" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="3 7 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 8" id="KW-0742">SOS response</keyword>
    <feature type="domain" description="RECA_2" evidence="10">
        <location>
            <begin position="46"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="domain" description="RECA_3" evidence="11">
        <location>
            <begin position="210"/>
            <end position="283"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="76"/>
            <end position="83"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009391"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00015553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00268"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU000526"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU004527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50162"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ68118.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="355" mass="38052" checksum="938DD47B3507A422" modified="2015-12-09" version="1">MSQSTLRLVESSQMDKTKALDAALSQIERAFGKGSIMRMGQGQVVEVQSVSTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLALHTVAEAQKTGGICAFIDAEHALDPIYARKLGVDIDNLLISQPDAGEQALEIADTLVRSGAIDVLVIDSVAALTPKAELEGEMGDSLPGMQARLMSQALRKLTASISKSKCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAIKDKDEVVGNQTRVKVVKNKLAPPFRQVEFDIIYGEGVSKMGELIDLGVKGGIVEKSGAWFSYNSQRLGQGRENSKQFLRENKEIADEIELSIRQNAGLIAEAIIDPAGGEEDDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZ76</accession>
    <name>A0A0M6ZZ76_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">LAX5112_01110</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the UPF0324 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66834.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008189587.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01110"/>
    <dbReference type="EnsemblBacteria" id="CTQ66834">
        <property type="protein sequence ID" value="CTQ66834"/>
        <property type="gene ID" value="LAX5112_01110"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018383">
        <property type="entry name" value="UPF0324_pro"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30106">
        <property type="entry name" value="PTHR30106"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03601">
        <property type="entry name" value="Cons_hypoth698"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="12"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="35"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="88"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="122"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="155"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="186"/>
            <end position="207"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="219"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="248"/>
            <end position="268"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="280"/>
            <end position="298"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="310"/>
            <end position="330"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ66834.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="331" mass="34740" checksum="E6855EE4A0965D80" modified="2015-12-09" version="1">MIDKIKHRAHELFPGIAIAGLVAISAQFLNEHYGAPAMLMAILLGMPLNFLSEEKRTADGIAFSARTLLRIGVALLGVRISVDMVQALGLPFLALVVAGVLATIGFSLLIGNLFGKDRLFSFLSGGAVAICGASAAMAIGSILPKREHAERDLAFTVITVTVLSTLAMIFYPILTASLGLDRDATGVFLGGTIHDVAQVVGAGFSVSEETGDLSTLVKLIRVTLLAPIVLIAALILRKGTEPGAARPPLMPLFVVAFLILATFNSFGFIPEIVKDAASQVSRWALLAAIAAVGMKTSIPKLLEVGGPAIWMVVTQTVFLALFVLAGIWLIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZB2</accession>
    <name>A0A0M6ZZB2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Transcriptional regulatory protein QseB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">qseB</name>
        <name evidence="6" type="ORF">LAX5112_01366</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67390.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671173.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01366"/>
    <dbReference type="EnsemblBacteria" id="CTQ67390">
        <property type="protein sequence ID" value="CTQ67390"/>
        <property type="gene ID" value="LAX5112_01366"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00383">
        <property type="entry name" value="trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001867">
        <property type="entry name" value="OmpR/PhoB-type_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016032">
        <property type="entry name" value="Sig_transdc_resp-reg_C-effctor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039420">
        <property type="entry name" value="WalR-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48111">
        <property type="entry name" value="PTHR48111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00486">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00862">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46894">
        <property type="entry name" value="SSF46894"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51755">
        <property type="entry name" value="OMPR_PHOB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="4">
        <location>
            <begin position="2"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="domain" description="OmpR/PhoB-type" evidence="5">
        <location>
            <begin position="124"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="OmpR/PhoB-type" evidence="3">
        <location>
            <begin position="124"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="2">
        <location>
            <position position="51"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ67390.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="222" mass="24917" checksum="714886318CEA04B1" modified="2015-12-09" version="1">MRLLIVEDDKDLNRQLVTALEEAGYVVDSAFDGEEGHFLGDTEPYDAVVLDLGLPTLDGLSVLEKWRRDGKTMPVLILTARDRWSDKVAGIDAGADDYVAKPFHMEEVLARVRALVRRAAGHASNELTCGNVRLDLRAGRVTVDGSPIKLTSHEYRLLSYLLHHQGKVISRTELTEHLYDQDFDRDSNTVEVFVGRLRKKIGADMIETIRGLGYRLGEARDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZT9</accession>
    <name>A0A0M6ZZT9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Putative endoribonuclease L-PSP</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01536</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67831.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671335.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01536"/>
    <dbReference type="EnsemblBacteria" id="CTQ67831">
        <property type="protein sequence ID" value="CTQ67831"/>
        <property type="gene ID" value="LAX5112_01536"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035959">
        <property type="entry name" value="RutC-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006175">
        <property type="entry name" value="YjgF/YER057c/UK114"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01042">
        <property type="entry name" value="Ribonuc_L-PSP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55298">
        <property type="entry name" value="SSF55298"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67831.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="127" mass="13765" checksum="57551CFF8122431F" modified="2015-12-09" version="1">MLPIRQNIEQLGPVAGPYSHAVIHGDTLYTSGLTAFGSNSQFEGAGVQTQTILDQLSFLAESCKTSLQHLIKVTIFAVDPADIPEIRAALINRYGENVPASSLVFVKELFSPDLRLEIEAVFAVHPT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0G6</accession>
    <name>A0A0M7A0G6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">3-oxoacyl-[acyl-carrier-protein] reductase FabG</fullName>
            <ecNumber evidence="2">1.1.1.100</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">fabG_3</name>
        <name evidence="2" type="ORF">LAX5112_01309</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the short-chain dehydrogenases/reductases (SDR) family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.100" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67284.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671134.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01309"/>
    <dbReference type="EnsemblBacteria" id="CTQ67284">
        <property type="protein sequence ID" value="CTQ67284"/>
        <property type="gene ID" value="LAX5112_01309"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004316">
        <property type="term" value="F:3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00106">
        <property type="entry name" value="adh_short"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU000363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67284.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="255" mass="26311" checksum="D8DEF62D6730774C" modified="2015-12-09" version="1">MKLDQSMAAVVTGGASGLGAATARMLAAEGVKVTLFDRNGEQGAQVAEEIGGVFADVDVTDQASVEAGFEAARSAHGQERILVNCAGIAPVGKTTSRGEPHPMDMFEKVISVNLIGSFRCIALASTGMSSLDPVTADGGRGVIVSTASVAAFDGQIGQVAYAASKAGVAGMTLPVARDLSKLGIRVMTIAPGIFETPMLLGLSQEVQDSLGQQVPFPSRLGRATEYAQLVKSICENDMLNGETIRLDGAIRMAPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0G7</accession>
    <name>A0A0M7A0G7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01588</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67966.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01588"/>
    <dbReference type="EnsemblBacteria" id="CTQ67966">
        <property type="protein sequence ID" value="CTQ67966"/>
        <property type="gene ID" value="LAX5112_01588"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67966.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="248" mass="27485" checksum="E888C2FCB8ECF181" modified="2015-12-09" version="1">MVFRFFLFIAIVLWSGQLSARTIVNVGLTSIQPPLVFSGSEERGLIYDVLAALNEHQDAYTFTPSLVPAKRLLANHQTDNFHLIAYNDVLWGWGQRGGKPSVNLTNGKDLFFQLKGTAQKNGATAQIGAVMGFHYAFSDFNAEKLGSMPNVSLVSDESGVLKLVEFGRVDKGVASEAFLNWISVSEPDVYAKLEIFADHPDHTYNRQFVVFPYAPITVEQLNIYLRGLKASGVIGEIYAKYGIEIPDF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A111</accession>
    <name>A0A0M7A111_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcriptional regulator BolA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01575</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the BolA/IbaG family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67930.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008196307.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01575"/>
    <dbReference type="EnsemblBacteria" id="CTQ67930">
        <property type="protein sequence ID" value="CTQ67930"/>
        <property type="gene ID" value="LAX5112_01575"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.90">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002634">
        <property type="entry name" value="BolA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036065">
        <property type="entry name" value="BolA-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01722">
        <property type="entry name" value="BolA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF003113">
        <property type="entry name" value="BolA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82657">
        <property type="entry name" value="SSF82657"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU003860"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67930.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="77" mass="8362" checksum="9BBE9FA66BED629C" modified="2015-12-09" version="1">MPMNANEIETLIKEALPDAQVEIRDLAGDGDHYAANVVSESFRGKSRVQQHQMVYEALKGNMGGALHALALQTKAPD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1N1</accession>
    <name>A0A0M7A1N1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Auxin efflux carrier</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">LAX5112_01868</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the auxin efflux carrier (TC 2.A.69) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68739.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01868"/>
    <dbReference type="EnsemblBacteria" id="CTQ68739">
        <property type="protein sequence ID" value="CTQ68739"/>
        <property type="gene ID" value="LAX5112_01868"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1530.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004776">
        <property type="entry name" value="Mem_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038770">
        <property type="entry name" value="Na+/solute_symporter_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03547">
        <property type="entry name" value="Mem_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="36"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="65"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="124"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="169"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="196"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="285"/>
            <end position="305"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010145"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ68739.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="306" mass="32387" checksum="142948CDA57FE758" modified="2015-12-09" version="1">MIFFALAPVILVIASGYLLARANLISGEQWVGVERLAYFVLFPAVLFRTIALADFSSVPTFDMGAALLSAIVTFAVALLAARPLIEKIWGIPAVRFTSIFQGSLRWNAMIALALAANIGGQTALAMLAVAMVFMIPILNGASIVVLSWYASGTTPNFSKILKDLFTNPFILSIFAGVLMNLSGLTMPTIVDDTLEIFAQAALPIGIICVGAGLDLSSLRRPGPALTMGTFLRPVFMPLLAFLFANLYGVTGQALTVIIIASAVPCASNSYLLARQLGGDAKLMAEIITLQTLAATVTIPLALLLFT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2R9</accession>
    <name>A0A0M7A2R9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Leucine-responsive regulatory protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">lrp_6</name>
        <name evidence="5" type="ORF">LAX5112_01930</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68907.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671621.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01930"/>
    <dbReference type="EnsemblBacteria" id="CTQ68907">
        <property type="protein sequence ID" value="CTQ68907"/>
        <property type="gene ID" value="LAX5112_01930"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000485">
        <property type="entry name" value="AsnC-type_HTH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019888">
        <property type="entry name" value="Tscrpt_reg_AsnC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019887">
        <property type="entry name" value="Tscrpt_reg_AsnC/Lrp_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019885">
        <property type="entry name" value="Tscrpt_reg_HTH_AsnC-type_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01037">
        <property type="entry name" value="AsnC_trans_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13404">
        <property type="entry name" value="HTH_AsnC-type"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00033">
        <property type="entry name" value="HTHASNC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00344">
        <property type="entry name" value="HTH_ASNC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00519">
        <property type="entry name" value="HTH_ASNC_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50956">
        <property type="entry name" value="HTH_ASNC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH asnC-type" evidence="4">
        <location>
            <begin position="2"/>
            <end position="63"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50956"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ68907.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="164" mass="18555" checksum="7C1270A32BD3B121" modified="2015-12-09" version="1">MIDRIDRRILSILQEDCTVPVAEIGRRVGLSTTPCWRRIQKMEEDGVITGRVALLDPAKVNAKVTAFVAITTSQHSEDWLKKFADVIQEFPEVVEFYRMAGQVDYLLRVAVPDIEAYDSFYKRLIAKIDISDVSTTFAMEQIKNTTALPLSYVATEKPKAEKDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3I7</accession>
    <name>A0A0M7A3I7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">HTH-type transcriptional repressor YvoA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yvoA_3</name>
        <name evidence="2" type="ORF">LAX5112_02191</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69635.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671832.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02191"/>
    <dbReference type="EnsemblBacteria" id="CTQ69635">
        <property type="protein sequence ID" value="CTQ69635"/>
        <property type="gene ID" value="LAX5112_02191"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07377">
        <property type="entry name" value="WHTH_GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1410.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028978">
        <property type="entry name" value="Chorismate_lyase_/UTRA_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012702">
        <property type="entry name" value="CP_lyase_PhnF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000524">
        <property type="entry name" value="Tscrpt_reg_HTH_GntR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011663">
        <property type="entry name" value="UTRA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00392">
        <property type="entry name" value="GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07702">
        <property type="entry name" value="UTRA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00035">
        <property type="entry name" value="HTHGNTR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00345">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00866">
        <property type="entry name" value="UTRA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64288">
        <property type="entry name" value="SSF64288"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02325">
        <property type="entry name" value="C_P_lyase_phnF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50949">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH gntR-type" evidence="1">
        <location>
            <begin position="13"/>
            <end position="81"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69635.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="245" mass="26506" checksum="B3EFB26F817B88FC" modified="2015-12-09" version="1">MTGQSKLDRAAGIAVWRQIMEMLKGEIAAGGYEKGSRLPPESEIASRFGVNRHTVRRAIAALTAEGLLRADQGRGTFVASAPLSYPINARTRFSEIVSGQDRSPSGRLIGSEIEDADALLAQQLDVPLGTPLIRLKTLRVADSVPMMVGTSWLEQARVPNLVADYAECGTITEALRRGGIKDYSRRESRISAELVDTEDAQQLGIALGQPVVVIESVNVDPDGRPLQYTRTRAAADRIQLVVNGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3P7</accession>
    <name>A0A0M7A3P7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Helix-turn-helix domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02136</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69499.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02136"/>
    <dbReference type="EnsemblBacteria" id="CTQ69499">
        <property type="protein sequence ID" value="CTQ69499"/>
        <property type="gene ID" value="LAX5112_02136"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009061">
        <property type="entry name" value="DNA-bd_dom_put_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041657">
        <property type="entry name" value="HTH_17"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12728">
        <property type="entry name" value="HTH_17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46955">
        <property type="entry name" value="SSF46955"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH_17" evidence="1">
        <location>
            <begin position="16"/>
            <end position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12728"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69499.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="74" mass="8355" checksum="B6A184705973461E" modified="2015-12-09" version="1">MERHQEHSGTNLLNENKAAEYLGLSVRTLQAWRVRGGGPTFVKAGRAVRYRPDDLNAWINERMATSTSALEVRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A409</accession>
    <name>A0A0M7A409_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Inner membrane protein YcfT</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ycfT</name>
        <name evidence="3" type="ORF">LAX5112_02004</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69156.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671701.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02004"/>
    <dbReference type="EnsemblBacteria" id="CTQ69156">
        <property type="protein sequence ID" value="CTQ69156"/>
        <property type="gene ID" value="LAX5112_02004"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016747">
        <property type="term" value="F:acyltransferase activity, transferring groups other than amino-acyl groups"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002656">
        <property type="entry name" value="Acyl_transf_3_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01757">
        <property type="entry name" value="Acyl_transf_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="42"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="79"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="113"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="150"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="173"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="203"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="229"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="260"/>
            <end position="281"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="287"/>
            <end position="312"/>
        </location>
    </feature>
    <feature type="domain" description="Acyl_transf_3" evidence="2">
        <location>
            <begin position="8"/>
            <end position="309"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01757"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ69156.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="344" mass="38339" checksum="5E0473A4EADC2706" modified="2015-12-09" version="1">MVQAPRVDWVDTAKGICIVFVVMMHAVLGVEAAAGETGWMHAVIAFAAPFRMPDFFLISGLFLANVITRDWKLYLDRKVVHFAYFYVLWMTIQFAVKAPVFAGEMGWAGAFQFYLVSFFQPFGTLWFIYMLPIFFVVCKLAHDKGVPWQVMLGIAALLQIAPIHTGWLLVDEFASRFVYFYAGYIFAPKIFELAEWVRDRVSLSLALLLVWGVINGGLVFIGWSELPLVSLALGAAGAGAIILTSALIVKTGSMDFLRHFGANSIVIYLAFFFPMGLTRVILLKLDILDIGTVSLIVNIVAVIAPVILLWVIQKTGIGWFLFKRPEWAYLGGTYGRKTAPQAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A461</accession>
    <name>A0A0M7A461_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Dihydropteroate synthase</fullName>
            <shortName evidence="1">DHPS</shortName>
            <ecNumber evidence="1">2.5.1.15</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="1">Dihydropteroate pyrophosphorylase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3" type="primary">folP_1</name>
        <name evidence="3" type="ORF">LAX5112_02287</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="1">Cofactor biosynthesis; tetrahydrofolate biosynthesis; 7,8-dihydrofolate from 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine diphosphate and 4-aminobenzoate: step 1/2.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the DHPS family.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.15" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69875.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671897.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02287"/>
    <dbReference type="EnsemblBacteria" id="CTQ69875">
        <property type="protein sequence ID" value="CTQ69875"/>
        <property type="gene ID" value="LAX5112_02287"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00077">
        <property type="reaction ID" value="UER00156"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004156">
        <property type="term" value="F:dihydropteroate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046656">
        <property type="term" value="P:folic acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046654">
        <property type="term" value="P:tetrahydrofolate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd00739">
        <property type="entry name" value="DHPS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045031">
        <property type="entry name" value="DHP_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006390">
        <property type="entry name" value="DHP_synth_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011005">
        <property type="entry name" value="Dihydropteroate_synth-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000489">
        <property type="entry name" value="Pterin-binding_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20941">
        <property type="entry name" value="PTHR20941"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00809">
        <property type="entry name" value="Pterin_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51717">
        <property type="entry name" value="SSF51717"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01496">
        <property type="entry name" value="DHPS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00792">
        <property type="entry name" value="DHPS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00793">
        <property type="entry name" value="DHPS_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50972">
        <property type="entry name" value="PTERIN_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0289">Folate biosynthesis</keyword>
    <keyword evidence="1" id="KW-0460">Magnesium</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Pterin-binding" evidence="2">
        <location>
            <begin position="14"/>
            <end position="260"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU361205"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50972"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ69875.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="272" mass="29191" checksum="4D34ADCD28B9DF3C" modified="2015-12-09" version="1">MAKAAAYTLPERRAHVMGILNVTPDSFSDGGRFDAADAALDHARSMIADGADILDIGAESTRPGSEPVGLEDEWSRLAPVLEPVCELGCPVSIDTYKAEIARRAGAAGAAIVNDVWGLQKDPAMADTVAELGVPVVMMHNRDHADADIDILADMDRFFETSIALAERAGIAKEKQILDPGFGFGKTIDQNFLILNRLETLQKHGLPILAGASRKRMIGAVLGVETDERLFGSIAVHMTAVIKGAAILRVHDVRPHADCVRISQATRLERNPV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A473</accession>
    <name>A0A0M7A473_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">NAD(P)H azoreductase</fullName>
            <ecNumber evidence="2">1.7.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">azoB_1</name>
        <name evidence="2" type="ORF">LAX5112_02281</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.7.-.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69858.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671893.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02281"/>
    <dbReference type="EnsemblBacteria" id="CTQ69858">
        <property type="protein sequence ID" value="CTQ69858"/>
        <property type="gene ID" value="LAX5112_02281"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016040">
        <property type="entry name" value="NAD(P)-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13460">
        <property type="entry name" value="NAD_binding_10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NAD(P)-bd_dom" evidence="1">
        <location>
            <begin position="10"/>
            <end position="170"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13460"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69858.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="275" mass="29444" checksum="8876ABF7D991CAA0" modified="2015-12-09" version="1">MQNKTILVIGATGKTGSRIAKSLEDKGISIRRGSRSAPVPFDWDQPQTWGPALDGVSAVYVSYFPDIAFPGAVEQVEAFTKMAKDAGVEKLVLLTGRGEHHAERAENIVRKSGVAFTIVRAAWFAQNYSEGALFGPVMAGVLPMPGGEVREPIVDVDDIAAVAVAALTEDGHDGELYEVTGPRLMSFADMAQELSTAIGRPVQHLPISFEEFHAEVARSSGEMIAGVITEIARETLDGRNAHLTDGVQRALGRPPRDFKDYARDAARSGAWSAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4L4</accession>
    <name>A0A0M7A4L4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">TRAP transporter solute receptor, DctP family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_02148</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the bacterial solute-binding protein 7 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69531.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671802.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02148"/>
    <dbReference type="EnsemblBacteria" id="CTQ69531">
        <property type="protein sequence ID" value="CTQ69531"/>
        <property type="gene ID" value="LAX5112_02148"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071702">
        <property type="term" value="P:organic substance transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.190.170">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018389">
        <property type="entry name" value="DctP_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038404">
        <property type="entry name" value="TRAP_DctP_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33376">
        <property type="entry name" value="PTHR33376"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03480">
        <property type="entry name" value="DctP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0675">Receptor</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809125" evidence="3">
        <location>
            <begin position="20"/>
            <end position="348"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ69531.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="348" mass="37564" checksum="6BAA78EDC8CD5778" modified="2015-12-09" version="1">MKRMLAALAAVAFSAAAQAETYNLTMASSHPTVLPWVGQLSTLVVGESNNRLEAMGSEDRIEWTEAYGGSLYGFKDTLEAVGDGLTDAGWVGTLWEGSKMPLQNMTYFTPFVSDDLVATLKIMNELHREVPALQKAWDDQNVVFLGASGVETYHLLTNFPVNSLKDLEGRKILAPGPSANWIKHLGAVPVNGALPTYYNQIQTGVADGMVVILTGAFPNKHYEVAPYVTLVGIGAQMTGGLGINKDVWDGLSDDVKNVLTELGEEYTVAHAEEVMARYQTFLGKLPDAGATVTTLPAEDVVAWADGLPNLAKDWSDANAGKGADEVLQAYMAKVRDAGLEPRIDWTQR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A578</accession>
    <name>A0A0M7A578_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG</fullName>
            <ecNumber evidence="1">2.7.8.37</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">phnG</name>
        <name evidence="1" type="ORF">LAX5112_02190</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.7.8.37" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69632.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671920.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02190"/>
    <dbReference type="EnsemblBacteria" id="CTQ69632">
        <property type="protein sequence ID" value="CTQ69632"/>
        <property type="gene ID" value="LAX5112_02190"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061693">
        <property type="term" value="F:alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019634">
        <property type="term" value="P:organic phosphonate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015716">
        <property type="term" value="P:organic phosphonate transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009609">
        <property type="entry name" value="Phosphonate_metab_PhnG"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06754">
        <property type="entry name" value="PhnG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03293">
        <property type="entry name" value="PhnG_redo"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ69632.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="157" mass="16953" checksum="D66A9858CA7894F2" modified="2015-12-09" version="1">MTETTPSSTIAGDQAARQKNLAILAQAPADALDEKFNALAPPPYELVRQPETGLVMVRGRMGGTGSPFNLGEVTVTRCVVRLDSGETGSAYALGRDKTKALQSAVIDALWQRGETRAQIEADILAPLSNSQTERKTTVREETEATRVNFFTMVRGDN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A607</accession>
    <name>A0A0M7A607_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Bifunctional NMN adenylyltransferase/Nudix hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02470</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70329.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672061.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02470"/>
    <dbReference type="EnsemblBacteria" id="CTQ70329">
        <property type="protein sequence ID" value="CTQ70329"/>
        <property type="gene ID" value="LAX5112_02470"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016779">
        <property type="term" value="F:nucleotidyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020476">
        <property type="entry name" value="Nudix_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015797">
        <property type="entry name" value="NUDIX_hydrolase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000086">
        <property type="entry name" value="NUDIX_hydrolase_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00293">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00502">
        <property type="entry name" value="NUDIXFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55811">
        <property type="entry name" value="SSF55811"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51462">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Nudix hydrolase" evidence="1">
        <location>
            <begin position="6"/>
            <end position="139"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51462"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70329.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="142" mass="15307" checksum="6BE41A00007964E6" modified="2015-12-09" version="1">MSRPFPSVPVLSVSVLCHKDGSALLIKRGKPPYKDHWSLPGGKVEFGETLAEAAARELLEETELTAELDGPVEVFDSIQREENGDILSHFVLAVFVAKNPSGTVMAGDDATAAEWVALKDLDGRITTPGTPARIRRLLSKLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A673</accession>
    <name>A0A0M7A673_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">23S rRNA (Guanine(745)-N(1))-methyltransferase</fullName>
            <ecNumber evidence="2">2.1.1.187</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">rlmA</name>
        <name evidence="2" type="ORF">LAX5112_02491</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.1.1.187" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70389.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02491"/>
    <dbReference type="EnsemblBacteria" id="CTQ70389">
        <property type="protein sequence ID" value="CTQ70389"/>
        <property type="gene ID" value="LAX5112_02491"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052911">
        <property type="term" value="F:23S rRNA (guanine(745)-N(1))-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041698">
        <property type="entry name" value="Methyltransf_25"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13649">
        <property type="entry name" value="Methyltransf_25"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Methyltransf_25" evidence="1">
        <location>
            <begin position="210"/>
            <end position="303"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13649"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70389.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="372" mass="42053" checksum="8A9F738C9297044A" modified="2015-12-09" version="1">MAAATNWNMSDKQGLRRSPTPIAKVARRLRYAAHQGSRVALYTLHSEAMRRMNLRLQKDLPETPKVTPEGPVPSQRRMLADIVKLFAEDMKAVEDGIYPMPSDGTLSPRELLQTSQAFFEDVPKVARRRAENTHQEVNQDGPAFADALPRYYRQNFHFQTDGWLSEDSARLYDFQVDVLFSGATAAMRRKTLLPFAEILKRKDQRKIAYVDIACGTGGLLRPALNAFPRLSGIGLDLSEPYLNVARDRFKSPRAGYVTAMAEELPFADNSLDVVSCVFLFHELPPKIRRQVLNEIARVLKPGGSFLFVDSLQTGDVPDYDGLLTIFPQLFHEPYYTSYLKEDLTSLCADVGLDERWMRPAFVSRTAEFVKTG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A691</accession>
    <name>A0A0M7A691_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02235</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69750.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ69750">
        <property type="protein sequence ID" value="CTQ69750"/>
        <property type="gene ID" value="LAX5112_02235"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809148" evidence="1">
        <location>
            <begin position="22"/>
            <end position="175"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69750.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="175" mass="19230" checksum="E95A19A156FA8A0B" modified="2015-12-09" version="1">MRTVVCIFAMLFVFFQTPAFASEPLSASENRWARMSNACQAELGLSADQCGCIFTKSLDTSLSNVDLSFYYANEPDRLSAQALAKLDELRQICTADGTAGGSSQPSEHTALCESKSNMDAPRCSCFLRKTAAANYASNDVEMFLRGRASKVSDFSLYTEMTIHLLDCEKEVIQGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6U5</accession>
    <name>A0A0M7A6U5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02473</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70337.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672064.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70337">
        <property type="protein sequence ID" value="CTQ70337"/>
        <property type="gene ID" value="LAX5112_02473"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025597">
        <property type="entry name" value="DUF4345"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14248">
        <property type="entry name" value="DUF4345"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="45"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="73"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="103"/>
            <end position="121"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70337.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="125" mass="13861" checksum="2D8A06941C409FEF" modified="2015-12-09" version="1">MAFKKTFLFSAFALVSMIALLYGLNPSWFAKTLLGGADVNINFEHILRAVMCLYLAFAVFWLFCALTGRHIDLAILTIAVFAGGLFIGRLLSFALDGMPSPLLIFYAALEVVIVPVSVWLYRHPD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6W4</accession>
    <name>A0A0M7A6W4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">HTH lysR-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">syrM1</name>
        <name evidence="3" type="ORF">LAX5112_02478</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70351.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672068.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70351">
        <property type="protein sequence ID" value="CTQ70351"/>
        <property type="gene ID" value="LAX5112_02478"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd08417">
        <property type="entry name" value="PBP2_Nitroaromatics_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037402">
        <property type="entry name" value="YidZ_PBP2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="13"/>
            <end position="70"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ70351.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="306" mass="33399" checksum="868AED48965A59CE" modified="2015-12-09" version="1">MITDLSKSELRRLDLTLLLVFLGLLKHRKALDVAHDLGLTQSAISQALKRLRDVFGDDLFLRRPHGMEPTATALALETPIAHAVETLRGALGVARVFDPMTALGSVRLAAMHTEQAVLIPTLAASLRETSPGLDLSVVPRGRSEAMEALQQGEVDLALGFFRDIPNSCRSEVLYEDNYLVAGNSEVLPREEPLDLDAYCAMDHILTSPSAQFRGVVDLHLEKLGRKRRVVLGLPAFLPALAAAAASGALVTLPARVAQVFADRFGLVTQKPPLDLPSFPVLVVWHRRNDADPKTQWIKSQVICSKT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7D1</accession>
    <name>A0A0M7A7D1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Cell division protein FtsL</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02608</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70779.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008191160.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02608"/>
    <dbReference type="EnsemblBacteria" id="CTQ70779">
        <property type="protein sequence ID" value="CTQ70779"/>
        <property type="gene ID" value="LAX5112_02608"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="3" id="KW-0132">Cell division</keyword>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="6"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="27"/>
            <end position="54"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ70779.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="118" mass="13203" checksum="E24C6B25DAE1E2FE" modified="2015-12-09" version="1">MVRVLNILFIVAVVIGAATVYDLKMAATKSAAKVAELQRQIDEERNAIRHLRAEWSVLNKPERLQNLVERYNEYLQLEALEVRQIVMPDELPARPVTLEPIGGADQMGGYAGSSAMIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7V7</accession>
    <name>A0A0M7A7V7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Pyridoxine/pyridoxamine 5'-phosphate oxidase</fullName>
            <ecNumber evidence="6">1.4.3.5</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">PNP/PMP oxidase</fullName>
            <shortName evidence="6">PNPOx</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">Pyridoxal 5'-phosphate synthase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6 10" type="primary">pdxH</name>
        <name evidence="10" type="ORF">LAX5112_02530</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>H2O + O2 + pyridoxamine 5'-phosphate = H2O2 + NH4(+) + pyridoxal 5'-phosphate</text>
            <dbReference type="Rhea" id="RHEA:15817"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:16240"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="ChEBI" id="CHEBI:58451"/>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
            <dbReference type="EC" id="1.4.3.5"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>O2 + pyridoxine 5'-phosphate = H2O2 + pyridoxal 5'-phosphate</text>
            <dbReference type="Rhea" id="RHEA:15149"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:16240"/>
            <dbReference type="ChEBI" id="CHEBI:58589"/>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
            <dbReference type="EC" id="1.4.3.5"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6 7">
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </cofactor>
        <text evidence="6 7">Binds 1 FMN per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="6">Cofactor metabolism; pyridoxal 5'-phosphate salvage; pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate: step 1/1.</text>
    </comment>
    <comment type="pathway">
        <text evidence="6">Cofactor metabolism; pyridoxal 5'-phosphate salvage; pyridoxal 5'-phosphate from pyridoxine 5'-phosphate: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the pyridoxamine 5'-phosphate oxidase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="1.4.3.5" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70496.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672149.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02530"/>
    <dbReference type="EnsemblBacteria" id="CTQ70496">
        <property type="protein sequence ID" value="CTQ70496"/>
        <property type="gene ID" value="LAX5112_02530"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA01068">
        <property type="reaction ID" value="UER00304"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010181">
        <property type="term" value="F:FMN binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004733">
        <property type="term" value="F:pyridoxamine-phosphate oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008615">
        <property type="term" value="P:pyridoxine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01629">
        <property type="entry name" value="PdxH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000659">
        <property type="entry name" value="Pyridox_Oxase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019740">
        <property type="entry name" value="Pyridox_Oxase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011576">
        <property type="entry name" value="Pyridox_Oxase_put"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019576">
        <property type="entry name" value="Pyridoxamine_oxidase_dimer_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012349">
        <property type="entry name" value="Split_barrel_FMN-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10851">
        <property type="entry name" value="PTHR10851"/>
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        <property type="entry name" value="Pyd_amn-ph_oxd"/>
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    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00558">
        <property type="entry name" value="pdxH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01064">
        <property type="entry name" value="PYRIDOX_OXIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 6" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="3 6 7" id="KW-0288">FMN</keyword>
    <keyword evidence="4 6 10" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5 6" id="KW-0664">Pyridoxine biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
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        <location>
            <begin position="38"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="domain" description="PNP_phzG_C" evidence="9">
        <location>
            <begin position="169"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="6">
        <location>
            <begin position="188"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6 7">
        <location>
            <begin position="58"/>
            <end position="63"/>
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        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
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    <feature type="binding site" evidence="6">
        <location>
            <position position="63"/>
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        <ligand>
            <name>substrate</name>
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        <location>
            <begin position="73"/>
            <end position="74"/>
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        <ligand>
            <name>FMN</name>
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        </ligand>
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    <feature type="binding site" evidence="6 7">
        <location>
            <position position="80"/>
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        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6 7">
        <location>
            <position position="102"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="120"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
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        <location>
            <position position="124"/>
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        <ligand>
            <name>substrate</name>
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            <position position="128"/>
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        <location>
            <begin position="137"/>
            <end position="138"/>
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        <ligand>
            <name>FMN</name>
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        </ligand>
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    <feature type="binding site" evidence="6 7">
        <location>
            <position position="182"/>
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        <ligand>
            <name>FMN</name>
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    <feature type="binding site" evidence="6 7">
        <location>
            <position position="192"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007301"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
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    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022643"/>
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    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023096"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01629"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR000190-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF01243"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF10590"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ70496.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="211" mass="24431" checksum="8E64E14EF415FC0E" modified="2015-12-09" version="1">MTDLKNPHEELTKGDFVEAEKPFELFDEWLEEAKTTEPNDPNALALSTVDPDGLPNVRMVLLKGFDETGFVFYTNLESAKGRELLSAGKAAMCFHWKSLRRQIRIRGEIVQVSAEEADEYYQSRPRGSRIGAWASRQSRPLESRFALEKEVAKYTAKFGISDIPRPEHWSGLRLIPSEIEFWADRPFRLHDRVKFTRSSPSEPWNKERLYP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AA02</accession>
    <name>A0A0M7AA02_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="18">D-malate dehydrogenase [decarboxylating]</fullName>
            <ecNumber evidence="15">1.1.1.83</ecNumber>
            <ecNumber evidence="16">1.1.1.93</ecNumber>
            <ecNumber evidence="14">4.1.1.73</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="20" type="primary">ttuC</name>
        <name evidence="20" type="ORF">LAX5112_02703</name>
    </gene>
    <organism evidence="20 21">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="21" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="21">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Has multiple catalytic activities. Apart from catalyzing the oxidation of (+)-tartrate to oxaloglycolate, also converts meso-tartrate to D-glycerate and catalyzes the oxidative decarboxylation of D-malate to pyruvate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>(2R,3R)-tartrate + H(+) = (R)-glycerate + CO2</text>
            <dbReference type="Rhea" id="RHEA:13317"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:16659"/>
            <dbReference type="ChEBI" id="CHEBI:30924"/>
            <dbReference type="EC" id="4.1.1.73"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>(2R,3R)-tartrate + NAD(+) = 2-hydroxy-3-oxosuccinate + H(+) + NADH</text>
            <dbReference type="Rhea" id="RHEA:15209"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30924"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:58265"/>
            <dbReference type="EC" id="1.1.1.93"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>(2R,3S)-tartrate + NAD(+) = 2-hydroxy-3-oxosuccinate + H(+) + NADH</text>
            <dbReference type="Rhea" id="RHEA:16457"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30928"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:58265"/>
            <dbReference type="EC" id="1.1.1.93"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>(R)-malate + NAD(+) = CO2 + NADH + pyruvate</text>
            <dbReference type="Rhea" id="RHEA:18365"/>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
            <dbReference type="ChEBI" id="CHEBI:15588"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="EC" id="1.1.1.83"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>NAD(+) + tartrate = 2-hydroxy-3-oxosuccinate + H(+) + NADH</text>
            <dbReference type="Rhea" id="RHEA:18853"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30929"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:58265"/>
            <dbReference type="EC" id="1.1.1.93"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="8">
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="7">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="11">Carbohydrate acid metabolism; tartrate degradation; 2-hydroxy-3-oxosuccinate from L-tartrate: step 1/1.</text>
    </comment>
    <comment type="pathway">
        <text evidence="12">Carbohydrate acid metabolism; tartrate degradation; 2-hydroxy-3-oxosuccinate from meso-tartrate: step 1/1.</text>
    </comment>
    <comment type="pathway">
        <text evidence="10">Carbohydrate acid metabolism; tartrate degradation; D-glycerate from L-tartrate: step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="13">Belongs to the isocitrate and isopropylmalate dehydrogenases family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.83" evidence="15"/>
    <dbReference type="EC" id="1.1.1.93" evidence="16"/>
    <dbReference type="EC" id="4.1.1.73" evidence="14"/>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71060.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672260.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02703"/>
    <dbReference type="EnsemblBacteria" id="CTQ71060">
        <property type="protein sequence ID" value="CTQ71060"/>
        <property type="gene ID" value="LAX5112_02703"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00839">
        <property type="reaction ID" value="UER00800"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046553">
        <property type="term" value="F:D-malate dehydrogenase (decarboxylating) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050319">
        <property type="term" value="F:tartrate decarboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009027">
        <property type="term" value="F:tartrate dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019818">
        <property type="entry name" value="IsoCit/isopropylmalate_DH_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024084">
        <property type="entry name" value="IsoPropMal-DH-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011829">
        <property type="entry name" value="TTC_DH"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00180">
        <property type="entry name" value="Iso_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01329">
        <property type="entry name" value="Iso_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02089">
        <property type="entry name" value="TTC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00470">
        <property type="entry name" value="IDH_IMDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="17" id="KW-0456">Lyase</keyword>
    <keyword evidence="20" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="21" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Iso_dh" evidence="19">
        <location>
            <begin position="5"/>
            <end position="348"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000818"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001276"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00001361"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00001421"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00001571"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00001958"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00004033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00004803"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00004981"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00005110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00007769"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00012223"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00013126"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00013144"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="ARBA" id="ARBA00030902"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="19">
        <source>
            <dbReference type="SMART" id="SM01329"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="EMBL" id="CTQ71060.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="21">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="357" mass="38699" checksum="02CF819E1AD29627" modified="2015-12-09" version="1">MRTYQIAAIPADGIGPEVIEAGAEVLAALGQRAGDVDFKLTFFDWGSERYKKHGEMMPSDGLEQLKPFDAIYFGAVGAPDVPDHITLWGLRLPICQGFDQYANVRPTKIIPGVTSPLRGVGVGDLDWVIVRENSEGEYSGNGGRAHRGLPEEVGTEVAIFTRVGVTRIMRYAFQLAQSRPRKLLTVVTKSNAQRHGMVMWDEIAAEVAKEFPDVTWDKMLVDAMTVRMVKNPQSLDTIVATNLHADILSDLAGALAGSLGVAPTANIDPERRFPSMFEPIHGSAFDITGKGIANPVATFWTASQMLDHLGEETSSQRLMTAVERVCDAGIVTPDVGGKATTREVTEAVIRAIHGSNE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AA18</accession>
    <name>A0A0M7AA18_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">divL</name>
        <name evidence="6" type="ORF">LAX5112_02915</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71709.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02915"/>
    <dbReference type="EnsemblBacteria" id="CTQ71709">
        <property type="protein sequence ID" value="CTQ71709"/>
        <property type="gene ID" value="LAX5112_02915"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
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        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000014">
        <property type="entry name" value="PAS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035965">
        <property type="entry name" value="PAS-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13188">
        <property type="entry name" value="PAS_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00091">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="SSF55785"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="58"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="5">
        <location>
            <begin position="611"/>
            <end position="828"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ71709.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="837" mass="91384" checksum="CA2D88FE0FB68E20" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAC3</accession>
    <name>A0A0M7AAC3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Cbb3-type cytochrome oxidase, subunit 3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03049</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72095.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008189268.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03049"/>
    <dbReference type="EnsemblBacteria" id="CTQ72095">
        <property type="protein sequence ID" value="CTQ72095"/>
        <property type="gene ID" value="LAX5112_03049"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01324">
        <property type="entry name" value="cbb3_Oxidase_CcoQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008621">
        <property type="entry name" value="Cbb3-typ_cyt_oxidase_comp"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05545">
        <property type="entry name" value="FixQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="33"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72095.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="51" mass="5818" checksum="25AC8F1D5337B842" modified="2015-12-09" version="1">MNETYSALAAFAQTGGLIYFMILFGIVLAYALWPKNRKKFDDAAQIPFRED</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAE8</accession>
    <name>A0A0M7AAE8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">tRNA pseudouridine synthase B</fullName>
            <ecNumber evidence="4">5.4.99.25</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">tRNA pseudouridine(55) synthase</fullName>
            <shortName evidence="4">Psi55 synthase</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="4">tRNA pseudouridylate synthase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="4">tRNA-uridine isomerase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="4 8" type="primary">truB</name>
        <name evidence="8" type="ORF">LAX5112_02804</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 4">
            <text>uridine(55) in tRNA = pseudouridine(55) in tRNA</text>
            <dbReference type="Rhea" id="RHEA:42532"/>
            <dbReference type="Rhea" id="RHEA-COMP:10101"/>
            <dbReference type="Rhea" id="RHEA-COMP:10102"/>
            <dbReference type="ChEBI" id="CHEBI:65314"/>
            <dbReference type="ChEBI" id="CHEBI:65315"/>
            <dbReference type="EC" id="5.4.99.25"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2 4">Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.</text>
    </comment>
    <dbReference type="EC" id="5.4.99.25" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71386.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672346.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02804"/>
    <dbReference type="EnsemblBacteria" id="CTQ71386">
        <property type="protein sequence ID" value="CTQ71386"/>
        <property type="gene ID" value="LAX5112_02804"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0106029">
        <property type="term" value="F:tRNA pseudouridine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031119">
        <property type="term" value="P:tRNA pseudouridine synthesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd02573">
        <property type="entry name" value="PseudoU_synth_EcTruB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01080">
        <property type="entry name" value="TruB_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020103">
        <property type="entry name" value="PsdUridine_synth_cat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002501">
        <property type="entry name" value="PsdUridine_synth_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014780">
        <property type="entry name" value="tRNA_psdUridine_synth_TruB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015240">
        <property type="entry name" value="tRNA_sdUridine_synth_fam1_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032819">
        <property type="entry name" value="TruB_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13767">
        <property type="entry name" value="PTHR13767"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09157">
        <property type="entry name" value="TruB-C_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16198">
        <property type="entry name" value="TruB_C_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01509">
        <property type="entry name" value="TruB_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55120">
        <property type="entry name" value="SSF55120"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00431">
        <property type="entry name" value="TruB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 8" id="KW-0413">Isomerase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="TruB_N" evidence="5">
        <location>
            <begin position="36"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="domain" description="TruB_C_2" evidence="7">
        <location>
            <begin position="185"/>
            <end position="251"/>
        </location>
    </feature>
    <feature type="domain" description="TruB-C_2" evidence="6">
        <location>
            <begin position="256"/>
            <end position="312"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="4">
        <location>
            <position position="51"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000385"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005642"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01080"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF01509"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF09157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF16198"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ71386.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="323" mass="35500" checksum="A4E5D198EEA7493F" modified="2015-12-09" version="1">MARKQQFKRKKNTINGWLVLDKPYGITSNEALGKIKRIFSPQKVGHAGTLDPRASGLLPVAFGEATKTVPFVMDGRKVYRFEVTWGAETNTDDTEGEVVVTSDVRPDAAAIKAVLPEFVGEIMQVPPKFSAIKVAGERAYDLARDGEEVELEARPIDMHRLDLVECPDENRAVFEAECGKGTYVRALARDIGRRLGTRGHVTELRRLLVGPFGEDDMVPFEELVAAADELEDGAGIEPLVAEFVLPVREAMEDIVEIPLSPDDAQRIRHGMPVLLRGRDAPLNCDLAFASEAGVPVAVGAIEKGRFQPSRVFHLYQAEDLGTQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAJ1</accession>
    <name>A0A0M7AAJ1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Virulence-regulating protein VirS</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">virS_2</name>
        <name evidence="5" type="ORF">LAX5112_03067</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72128.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672539.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72128">
        <property type="protein sequence ID" value="CTQ72128"/>
        <property type="gene ID" value="LAX5112_03067"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032687">
        <property type="entry name" value="AraC-type_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020449">
        <property type="entry name" value="Tscrpt_reg_HTH_AraC-type"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12625">
        <property type="entry name" value="Arabinose_bd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00032">
        <property type="entry name" value="HTHARAC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="4">
        <location>
            <begin position="228"/>
            <end position="328"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ72128.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="342" mass="37900" checksum="D61721A53AD1CCD3" modified="2015-12-09" version="1">MTTAYSGLVSNLLQGYAEAGYSQSDALTAAKLECLSDAPTAQDFIRLSRAISLQMNDEFAGQLERPQRIGTLALMAEHASRGRTVGDAFSRLADFMNMLDNTFTVTFSTAGSECRFQLERTTPAFPKSEFGIEAILVLMHRLTGWLAGKWVPLSSVWFDYPRPAWASGCGELFPGARPSFSFENSGFSMPIDVQSWPLHRSAEAAVAWARRTPMDAFMPVALLQGVSQQVAGLIEAAIIDKRPLPSMDELASLLEMPVYTLRRRLKKEGVSLPDIRLQVKRDHARSMLAETGESIEAIALRLGFSETSAFIRAFKEWTGVTPRTYRQSGRLQVPVPGHRTFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAJ7</accession>
    <name>A0A0M7AAJ7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="14">ATP synthase subunit alpha</fullName>
            <ecNumber evidence="14">7.1.2.2</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="14">ATP synthase F1 sector subunit alpha</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="14">F-ATPase subunit alpha</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="14 18" type="primary">atpA</name>
        <name evidence="18" type="ORF">LAX5112_02892</name>
    </gene>
    <organism evidence="18 19">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="19" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="19">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 14">Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="14">
            <text>ATP + 4 H(+)(in) + H2O = ADP + 5 H(+)(out) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:57720"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="7.1.2.2"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="13">F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has four main subunits: a(1), b(1), b'(1) and c(9-12).</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="14">Cell membrane</location>
            <topology evidence="14">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 14">Belongs to the ATPase alpha/beta chains family.</text>
    </comment>
    <dbReference type="EC" id="7.1.2.2" evidence="14"/>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71641.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008191672.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02892"/>
    <dbReference type="EnsemblBacteria" id="CTQ71641">
        <property type="protein sequence ID" value="CTQ71641"/>
        <property type="gene ID" value="LAX5112_02892"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045261">
        <property type="term" value="C:proton-transporting ATP synthase complex, catalytic core F(1)"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046933">
        <property type="term" value="F:proton-transporting ATP synthase activity, rotational mechanism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046961">
        <property type="term" value="F:proton-transporting ATPase activity, rotational mechanism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd18113">
        <property type="entry name" value="ATP-synt_F1_alpha_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01132">
        <property type="entry name" value="F1_ATPase_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.150.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.30.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01346">
        <property type="entry name" value="ATP_synth_alpha_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023366">
        <property type="entry name" value="ATP_synth_asu-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000793">
        <property type="entry name" value="ATP_synth_asu_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038376">
        <property type="entry name" value="ATP_synth_asu_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033732">
        <property type="entry name" value="ATP_synth_F1_a"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005294">
        <property type="entry name" value="ATP_synth_F1_asu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020003">
        <property type="entry name" value="ATPase_a/bsu_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004100">
        <property type="entry name" value="ATPase_F1/V1/A1_a/bsu_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036121">
        <property type="entry name" value="ATPase_F1/V1/A1_a/bsu_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000194">
        <property type="entry name" value="ATPase_F1/V1/A1_a/bsu_nucl-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00006">
        <property type="entry name" value="ATP-synt_ab"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00306">
        <property type="entry name" value="ATP-synt_ab_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02874">
        <property type="entry name" value="ATP-synt_ab_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF039088">
        <property type="entry name" value="F_ATPase_subunit_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50615">
        <property type="entry name" value="SSF50615"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00962">
        <property type="entry name" value="atpA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00152">
        <property type="entry name" value="ATPASE_ALPHA_BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="12 14" id="KW-0066">ATP synthesis</keyword>
    <keyword evidence="7 14" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="14" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="11 14" id="KW-0139">CF(1)</keyword>
    <keyword evidence="6 14" id="KW-0375">Hydrogen ion transport</keyword>
    <keyword evidence="18" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="9 14" id="KW-0406">Ion transport</keyword>
    <keyword evidence="10 14" id="KW-0472">Membrane</keyword>
    <keyword evidence="5 14" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="19" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 14" id="KW-1278">Translocase</keyword>
    <keyword evidence="3 14" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ATP-synt_ab_N" evidence="17">
        <location>
            <begin position="25"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="domain" description="ATP-synt_ab" evidence="15">
        <location>
            <begin position="149"/>
            <end position="372"/>
        </location>
    </feature>
    <feature type="domain" description="ATP-synt_ab_C" evidence="16">
        <location>
            <begin position="379"/>
            <end position="504"/>
        </location>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <begin position="169"/>
            <end position="176"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="site" description="Required for activity" evidence="14">
        <location>
            <position position="370"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003784"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022519"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022781"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023196"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023310"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00026013"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01346"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="Pfam" id="PF00006"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="Pfam" id="PF00306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="Pfam" id="PF02874"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="EMBL" id="CTQ71641.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="509" mass="55042" checksum="A4351808492CFA51" modified="2015-12-09" version="1">MDIRAAEISAILKDQIKSFGQEAEVSEVGQVLSVGDGIARVYGLDKVQAGEMVEFPGGIKGMALNLESDNVGVVIFGSDRDIKEGDTVKRTGAIVEVPVGKGLLGRVVDALGNPIDGKGPIEATEKRRVDVKAPGILPRKSVHEPMSTGLKAIDALIPVGRGQRELVIGDRQTGKTAIILDTFLNQKPLHAGNDEDAKLYCIYVAVGQKRSTVAQFVKTLEDNGALEYSIVIAATASEAAPLQFLAPFAGCAMGEFFRDNGMHAVIGYDDLTKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKLNEDHGKGSLTALPVIETQGNDVSAFIPTNVISITDGQIFLETDLFYQGIRPAVNVGLSVSRVGSSAQIKAMKQVAGPIKGELAQYREMAAFAQFGSDLDATTQRLLNRGARLTELLKQPQFSPLKTEEQVAVIYAGVNGYLDNHPVDRVKEFEEGLLLFLRGEHKELLDAIWEKKALDDDLTGKLKAALDAFAKNFA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AB43</accession>
    <name>A0A0M7AB43_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative NADPH-quinone reductase (Modulator of drug activity B)</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03149</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72348.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672612.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03149"/>
    <dbReference type="EnsemblBacteria" id="CTQ72348">
        <property type="protein sequence ID" value="CTQ72348"/>
        <property type="gene ID" value="LAX5112_03149"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.360">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003680">
        <property type="entry name" value="Flavodoxin_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029039">
        <property type="entry name" value="Flavoprotein-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02525">
        <property type="entry name" value="Flavodoxin_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52218">
        <property type="entry name" value="SSF52218"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Flavodoxin_2" evidence="1">
        <location>
            <begin position="5"/>
            <end position="189"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72348.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="197" mass="22128" checksum="667009561688ADA7" modified="2015-12-09" version="1">MAIVKRIVILDGHPDPAPDHLCHALSESYRSGAIEAGHDATLIRVADLDFPILQTPSDFQKQPTPVLLHPARDLLLAADHVVLIYPLWLGTLPAYTKAFLEQIFHYDTAFERGADDAWPKGKMKGKSARIVVTMGMPSLFYRLWYRAHSLKSLERNIFRFIGFSHVRSTIFGMVDAADDNKISGWKRKMSTLGQKAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AB52</accession>
    <name>A0A0M7AB52_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02668</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70963.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040450839.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70963">
        <property type="protein sequence ID" value="CTQ70963"/>
        <property type="gene ID" value="LAX5112_02668"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="27"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="30"/>
            <end position="63"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70963.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="96" mass="10939" checksum="F071A63F1E5EE013" modified="2015-12-09" version="1">MFAHHPERRGPSIPAIAKETNLWLLKTPRSLAGDDDENRGHDETGRDKSVPGDDSERGKLRKVRKEKTISEAFEDLSADEKETVNRLLDRMTGRKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABG5</accession>
    <name>A0A0M7ABG5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">L-arabinolactonase</fullName>
            <ecNumber evidence="2">3.1.1.15</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">araB_2</name>
        <name evidence="2" type="ORF">LAX5112_02676</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.1.15" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70984.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672239.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02676"/>
    <dbReference type="EnsemblBacteria" id="CTQ70984">
        <property type="protein sequence ID" value="CTQ70984"/>
        <property type="gene ID" value="LAX5112_02676"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050021">
        <property type="term" value="F:L-arabinonolactonase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.120.10.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011042">
        <property type="entry name" value="6-blade_b-propeller_TolB-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013658">
        <property type="entry name" value="SGL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005511">
        <property type="entry name" value="SMP-30"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08450">
        <property type="entry name" value="SGL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01790">
        <property type="entry name" value="SMP30FAMILY"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SGL" evidence="1">
        <location>
            <begin position="15"/>
            <end position="257"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08450"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70984.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="295" mass="32242" checksum="677A5FA63624ECD2" modified="2015-12-09" version="1">MSHTITRFLDTTYQLAECPTWDERTNRLLWADIQGRSVQSMDWDTRAITTWQFDNEVGSFGLCDDGRLIVSVWDKVVLFDSQTGTQEVLAEIEADKPQTRLNDGKVGPDGAFWVGTMDTSSPREPIAGLYRIDSSGNVAEIRDELQCSNGLAWTPDGDYMYHSDTSPGWIECYAFDAATGSLGAKMLFAQQTNATGRPDGATVDANGNYWSGGVSSGVVNCFAPNGELLEAIKMPVQRPTMPCFCGPNLDHLIVTSIKQPSDPTSVEPDTLSGGLFLIEGHGQTGLKTHRFKTAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABP8</accession>
    <name>A0A0M7ABP8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Peptide antibiotic transporter SbmA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">sbmA</name>
        <name evidence="5" type="ORF">LAX5112_02704</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71064.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008196586.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02704"/>
    <dbReference type="EnsemblBacteria" id="CTQ71064">
        <property type="protein sequence ID" value="CTQ71064"/>
        <property type="gene ID" value="LAX5112_02704"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:1904680">
        <property type="term" value="F:peptide transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015833">
        <property type="term" value="P:peptide transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036640">
        <property type="entry name" value="ABC1_TM_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009248">
        <property type="entry name" value="SbmA_BacA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05992">
        <property type="entry name" value="SbmA_BacA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90123">
        <property type="entry name" value="SSF90123"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 4" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2 4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="66"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="133"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="172"/>
            <end position="193"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="260"/>
            <end position="280"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ71064.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="337" mass="39084" checksum="9694A70CEA4BC156" modified="2015-12-09" version="1">MFRSFFLNRKWFFWAWIISVVILGATQYQVNLNVEINEWFGSFYDLIQRALSEPGSVTFSEYMRELMTFLYIAAIFVVVAVILDFITKHFVFRWRTAMNDYYMAHWHVVRHIEGASQRVQEDTMRFARIMESLGVSFLRSVMTLIAFLPILWELSANVTELPWIGPVAHSLVYVAIISAASGTVLLAVVGVKLPGLEFNNQKVEAAYRKELVYGEDDEERADPPSVDELFGHVRKNYFRLFFHYLYFDIAKWSYLQATVLVPYIALGPTIVTGAITLGVMQQIVRAFSQVENSFQYLVNAWTTIVELISVYKRLRAFEGHIWEYERNGSVPQEMPAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="31" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABT7</accession>
    <name>A0A0M7ABT7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Dipeptide epimerase</fullName>
            <ecNumber evidence="5">5.1.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ycjG</name>
        <name evidence="7" type="ORF">LAX5112_02718</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="4 5">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="4 5">Binds 1 Mg(2+) ion per subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the mandelate racemase/muconate lactonizing enzyme family.</text>
    </comment>
    <dbReference type="EC" id="5.1.1.-" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71104.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672272.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02718"/>
    <dbReference type="EnsemblBacteria" id="CTQ71104">
        <property type="protein sequence ID" value="CTQ71104"/>
        <property type="gene ID" value="LAX5112_02718"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016855">
        <property type="term" value="F:racemase and epimerase activity, acting on amino acids and derivatives"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd03319">
        <property type="entry name" value="L-Ala-DL-Glu_epimerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.390.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034603">
        <property type="entry name" value="Dipeptide_epimerase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036849">
        <property type="entry name" value="Enolase-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029017">
        <property type="entry name" value="Enolase-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029065">
        <property type="entry name" value="Enolase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013342">
        <property type="entry name" value="Mandelate_racemase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034593">
        <property type="entry name" value="Mandelate_racemase_DgoD-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013341">
        <property type="entry name" value="Mandelate_racemase_N_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48080">
        <property type="entry name" value="PTHR48080"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13378">
        <property type="entry name" value="MR_MLE_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02746">
        <property type="entry name" value="MR_MLE_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDF00010">
        <property type="entry name" value="dipeptide_epimerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00922">
        <property type="entry name" value="MR_MLE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51604">
        <property type="entry name" value="SSF51604"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54826">
        <property type="entry name" value="SSF54826"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 5 7" id="KW-0413">Isomerase</keyword>
    <keyword evidence="4 5" id="KW-0460">Magnesium</keyword>
    <keyword evidence="4 5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MR_MLE" evidence="6">
        <location>
            <begin position="131"/>
            <end position="222"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor; specific for (R)-substrate epimerization" evidence="3">
        <location>
            <position position="150"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor; specific for (S)-substrate epimerization" evidence="3">
        <location>
            <position position="246"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="175"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="201"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="224"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008031"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR634603-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR634603-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU366006"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM00922"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ71104.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="327" mass="34977" checksum="C6AB5917D2BE3B9F" modified="2015-12-09" version="1">MSRSVSIDLESFEIAGGFTISRGSRTHANVLVATVTDGDHVGRGECVPYARYNETMESVQEQIQEISPLLKDGLSRHALQEAMPAGAARNAVDCALWDLEAKQSGKPAAEIAGIPPLSPVTTAYTISVGTPEIMAEKTAKAAHRPLLKVKLGGSGDDERIEAVRKAAPDSTLIVDANEAWDDSCFARNMAACEAAGVALIEQPLPSKDDKRLMDFSSSITICADESLHTRDGLEDLRSRYDAINIKLDKAGGLTEALALLDQAKALEFKIMVGCMLGTSLAMAPAVLLAQRADYVDLDGPLLLTQDREPGLVFEGSTLFPPKPELWG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABW7</accession>
    <name>A0A0M7ABW7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02729</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71134.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672279.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ71134">
        <property type="protein sequence ID" value="CTQ71134"/>
        <property type="gene ID" value="LAX5112_02729"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71134.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="104" mass="11403" checksum="F11D652C48DBE800" modified="2015-12-09" version="1">MPQTKQKHVTESEAGSAKKSALNAGSLSPAQKRWLKSGLGQPGGKLPLFDDQGRQVPARTIRSCIDAGWAEPWFSNPIKPDWLVCKLTADAFELLTASQKNEKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACC2</accession>
    <name>A0A0M7ACC2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">16 kDa heat shock protein A</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ibpA_1</name>
        <name evidence="5" type="ORF">LAX5112_03124</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2 3">Belongs to the small heat shock protein (HSP20) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72281.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451040.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03124"/>
    <dbReference type="EnsemblBacteria" id="CTQ72281">
        <property type="protein sequence ID" value="CTQ72281"/>
        <property type="gene ID" value="LAX5112_03124"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd06470">
        <property type="entry name" value="ACD_IbpA-B_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.790">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002068">
        <property type="entry name" value="A-crystallin/Hsp20_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037913">
        <property type="entry name" value="ACD_IbpA/B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008978">
        <property type="entry name" value="HSP20-like_chaperone"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00011">
        <property type="entry name" value="HSP20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49764">
        <property type="entry name" value="SSF49764"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01031">
        <property type="entry name" value="SHSP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 5" id="KW-0346">Stress response</keyword>
    <feature type="domain" description="SHSP" evidence="4">
        <location>
            <begin position="27"/>
            <end position="138"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00285"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU003616"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS01031"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ72281.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="148" mass="16658" checksum="54E7E4BBC2A19D9D" modified="2015-12-09" version="1">MRHFDFTPLHRSTIGFDRLFSMLDAAGNEAPSYPPYNIERTGENAYRITMAVAGFSDAELSVEAKEHVLTIKGEKAEESADREILYRGIASRTFERRFQIAEYVRVDGASLENGLLHVDLVRELPEAMKPRKIEITSGGTKQIESTAH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACJ0</accession>
    <name>A0A0M7ACJ0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">TPR repeat-containing protein YrrB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yrrB</name>
        <name evidence="3" type="ORF">LAX5112_03150</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72351.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03150"/>
    <dbReference type="EnsemblBacteria" id="CTQ72351">
        <property type="protein sequence ID" value="CTQ72351"/>
        <property type="gene ID" value="LAX5112_03150"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001440">
        <property type="entry name" value="TPR_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_repeat"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00515">
        <property type="entry name" value="TPR_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00028">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="SSF48452"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50005">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="5"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0802">TPR repeat</keyword>
    <feature type="repeat" description="TPR" evidence="2">
        <location>
            <begin position="68"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="repeat" description="TPR" evidence="2">
        <location>
            <begin position="102"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="repeat" description="TPR" evidence="2">
        <location>
            <begin position="136"/>
            <end position="169"/>
        </location>
    </feature>
    <feature type="repeat" description="TPR" evidence="2">
        <location>
            <begin position="170"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="repeat" description="TPR" evidence="2">
        <location>
            <begin position="238"/>
            <end position="271"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022803"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00339"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ72351.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="284" mass="30929" checksum="843B6D750F7FBE8B" modified="2015-12-09" version="1">MSIGFNEMSSMRRIRKFVPYAALFGIATLLGACQGSGVYQGVPVNSSAGSSTNIASLTSVIEANPSDANAYSTRGIAYGQAGKLDNAIEDFNRALQLNPQSFQTYANRALVYRRMGQNDLAISDYTRAINIKPDYDVAYVGRGNIYRRQGNFTAALNDFNSVISRDSSDARAFYNRGLIYQAQNQNPRAIEDFATAIGLNPKASAPYIARGISYLAVNDPNAAFSDLSMAVNLDRDSSIAWANRGLALEMLDKPKDARRNFTRAMTLDNSNQVARDGLRRVGGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACL6</accession>
    <name>A0A0M7ACL6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03246</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72619.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672667.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03246"/>
    <dbReference type="EnsemblBacteria" id="CTQ72619">
        <property type="protein sequence ID" value="CTQ72619"/>
        <property type="gene ID" value="LAX5112_03246"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ72619.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="275" mass="29463" checksum="A589159390ADED5E" modified="2015-12-09" version="1">MTHGKFRPVRLPMYDWPEVADETRDLEAALTDEICSALAIAPSDLEPWDPEVGLYDLWTDPALLLAQTCGYPLTHKLAGKVHLLGAPNYLATGCTGAKYCSQIVVAKNGPFQSLADLKGARAVFNGPDSQSGMNAFRDTIAPTSDGCPFFASIAESGGHLASMDAVANGRTDVAAIDAVCWALAEQEKPGLANQLRVLAQTAQAPSLPFVTSTHLGTETHAEICAAVSRVLSNPQTEKSRKRLRICGFSKLSLADYQIILDMEADARARNYSVLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACQ9</accession>
    <name>A0A0M7ACQ9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DUF6430 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03359</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72905.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72905">
        <property type="protein sequence ID" value="CTQ72905"/>
        <property type="gene ID" value="LAX5112_03359"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045535">
        <property type="entry name" value="DUF6430"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20016">
        <property type="entry name" value="DUF6430"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="45"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="domain" description="DUF6430" evidence="2">
        <location>
            <begin position="82"/>
            <end position="265"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF20016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ72905.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="306" mass="34950" checksum="B2D74F8BB91AA915" modified="2015-12-09" version="1">MIIIWQLKRLMSNIGIWQSLFAPVGVGWTLTQIAIQMGYESILAPYLFLLWYLMPLGLIVGGYIYWPKRSSSKTLPNLDTEIEIRVGDIFSSKAPIVVTIPTTLETEFHSNAISEDSIQGQYTKKYCKDPSVLKLCLQKLVQDNNDFSTVKNFYSNGGDVRKYKPGEVLVIREFDRIAYCTTFASFNEHGTAQISQQEFYDLLPKMWMGIREKGEFGSVDVPLIGSRFARTGISRNKDILRELVYSLSVASADARLADKVTFFIRPSDFTRWGFSFEFIERLLLNVCDEHQQRMMENGSIGQPLDV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AD74</accession>
    <name>A0A0M7AD74_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03322</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72829.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008197224.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72829">
        <property type="protein sequence ID" value="CTQ72829"/>
        <property type="gene ID" value="LAX5112_03322"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="36"/>
            <end position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72829.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="63" mass="7078" checksum="FAA55649541BCFEB" modified="2015-12-09" version="1">MKFQNTVMPLIMLTALFGMIVMMFDVPVGMSPKRFGAYVFGAILVIVVLNLAMVLFDNARHKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADC1</accession>
    <name>A0A0M7ADC1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Lipopolysaccharide export system ATP-binding protein LptB</fullName>
            <ecNumber evidence="5">3.6.3.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">lptB_5</name>
        <name evidence="5" type="ORF">LAX5112_03102</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.6.3.-" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72220.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672583.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03102"/>
    <dbReference type="EnsemblBacteria" id="CTQ72220">
        <property type="protein sequence ID" value="CTQ72220"/>
        <property type="gene ID" value="LAX5112_03102"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032823">
        <property type="entry name" value="BCA_ABC_TP_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12399">
        <property type="entry name" value="BCA_ABC_TP_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="25"/>
            <end position="273"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="57"/>
            <end position="64"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ72220.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="275" mass="30426" checksum="48DEA65D306E9A30" modified="2015-12-09" version="1">MNAIVSEKELSPAAAGAPAAGEELLRVDNVSLSFGGVKAITNISFDILKGEIRAIIGPNGAGKTSMLNVINGFYHPQEGTITWQGKVRRKMKPYEAASNGIARTFQNVALFKGMTTLDNIMSGRSLKMHKNFFWQLMWRGPAENEEIEHRKKVEDIIDFLEIQAIRKTPVGRLPYGLQKRVELGRALAMEPDLLLLDEPMAGMNLEEKEDMSRFIIDVNQEFGTTIALIEHDMGVVMDLSDRVVVLDYGKKIADGPPEEVQASQAVIDAYLGVSH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADU9</accession>
    <name>A0A0M7ADU9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Helix-turn-helix domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03238</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72596.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672661.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72596">
        <property type="protein sequence ID" value="CTQ72596"/>
        <property type="gene ID" value="LAX5112_03238"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001845">
        <property type="entry name" value="HTH_ArsR_DNA-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00778">
        <property type="entry name" value="HTHARSR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00418">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50987">
        <property type="entry name" value="HTH_ARSR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH arsR-type" evidence="1">
        <location>
            <begin position="1"/>
            <end position="95"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50987"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72596.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="117" mass="12479" checksum="8586F9CDB30CC6CB" modified="2015-12-09" version="1">MEKEDALRALAALGQETRLDVFRLLVKAGKEGMAAGAISDALSVRPNTLSTHLSALSRSGLVHAERDGRSIHYRADLSAMGALTTYLLQDCCGGNPEMCAPIMTMLGNSVSVEKDRC</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AE49</accession>
    <name>A0A0M7AE49_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03357</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72901.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672770.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03357"/>
    <dbReference type="EnsemblBacteria" id="CTQ72901">
        <property type="protein sequence ID" value="CTQ72901"/>
        <property type="gene ID" value="LAX5112_03357"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024501">
        <property type="entry name" value="DUF3141"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11339">
        <property type="entry name" value="DUF3141"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="795"/>
            <end position="865"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72901.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="865" mass="97018" checksum="BE6ED21AA5B1376D" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEX1</accession>
    <name>A0A0M7AEX1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Gamma-glutamyl-gamma-aminobutyrate hydrolase PuuD</fullName>
            <ecNumber evidence="1">3.5.1.94</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">puuD</name>
        <name evidence="1" type="ORF">LAX5112_03093</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.5.1.94" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72194.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008196052.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03093"/>
    <dbReference type="EnsemblBacteria" id="CTQ72194">
        <property type="protein sequence ID" value="CTQ72194"/>
        <property type="gene ID" value="LAX5112_03093"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033969">
        <property type="term" value="F:gamma-glutamyl-gamma-aminobutyrate hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011697">
        <property type="entry name" value="Peptidase_C26"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044668">
        <property type="entry name" value="PuuD-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43235">
        <property type="entry name" value="PTHR43235"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07722">
        <property type="entry name" value="Peptidase_C26"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="SSF52317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ72194.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="252" mass="27394" checksum="54170E7DFC7F9CD7" modified="2015-12-09" version="1">MSKPLVLVTADVKSIDGFNWHATISTYLQAVLKGADAIPMILPALGADLDIDAALDNVDGVLVTGSRSNVNPQLYGQEPTEANGPYDPDRDATTLPLIKRAVERGVPVFAICRGMQEMNVAFGGTLLTEVQEIAGRKDHRPPTSDSQDERFRIAHTVEIHSGGPLETVLGEEPFEVNSLHRQAVGELGKGLVIEAKAEDGTIEAMTIKDAPGYVMATQWHPEYWVMTDGPSKKLFSAFGDAVRTYRQKRLAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEY5</accession>
    <name>A0A0M7AEY5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03391</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72976.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72976">
        <property type="protein sequence ID" value="CTQ72976"/>
        <property type="gene ID" value="LAX5112_03391"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ72976.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="110" mass="12043" checksum="61E2AF1ABA6A4F59" modified="2015-12-09" version="1">MSNFSDVMDYLGLSQDEAARVLNTSAEEIVRWRNTNEAPPLHIWQSLVQMLDDVRRSAEEAAKSADLDHLEASDLNKVTLAMPSQMSSDLAGPKRAATALAVATLARVFV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AF64</accession>
    <name>A0A0M7AF64_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Beta-ketoacyl-acyl-carrier-protein synthase I</fullName>
            <ecNumber evidence="2">2.3.1.41</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ppsC</name>
        <name evidence="2" type="ORF">LAX5112_03165</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.3.1.41" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72393.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672620.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03165"/>
    <dbReference type="EnsemblBacteria" id="CTQ72393">
        <property type="protein sequence ID" value="CTQ72393"/>
        <property type="gene ID" value="LAX5112_03165"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004315">
        <property type="term" value="F:3-oxoacyl-[acyl-carrier-protein] synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd05276">
        <property type="entry name" value="p53_inducible_oxidoreductase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013149">
        <property type="entry name" value="ADH-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013154">
        <property type="entry name" value="ADH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011032">
        <property type="entry name" value="GroES-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020843">
        <property type="entry name" value="PKS_ER"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014189">
        <property type="entry name" value="Quinone_OxRdtase_PIG3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08240">
        <property type="entry name" value="ADH_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00107">
        <property type="entry name" value="ADH_zinc_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00829">
        <property type="entry name" value="PKS_ER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50129">
        <property type="entry name" value="SSF50129"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02824">
        <property type="entry name" value="quinone_pig3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PKS_ER" evidence="1">
        <location>
            <begin position="17"/>
            <end position="330"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72393.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="334" mass="35313" checksum="C6946402D38799B0" modified="2015-12-09" version="1">MQNLPDTMTVVAISEPGGPEVLILEQRALPDVGEGDILIRVEAAGVNRPDVLQRMGAYPPPKGASDLPGLEVAGEVVAVGAAVKGHSAGDKVTALCPGGGYAEYCKVPAGHALPVPAGMSVFEAAALPETFFTVWTNVFDRCGLRKGERFLVHGGASGIGTCAIQLAKAFGAEVFTTVGSSEKIEAVKALGADHVINYREQAFEKIILEVTGGQGVDVILDMVGGDYVERNWKAAAIEGRICQIATLNGVSHDVNFSRLMVKRLTHTGTTLRPRDDAFKSAIADSLRFKVWPLIESGQIKPLIDSTFPLSEAAEAHRRMESSGHIGKIVMTVGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGD1</accession>
    <name>A0A0M7AGD1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Ribosomal-protein-alanine N-acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03708</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ73959.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673046.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03708"/>
    <dbReference type="EnsemblBacteria" id="CTQ73959">
        <property type="protein sequence ID" value="CTQ73959"/>
        <property type="gene ID" value="LAX5112_03708"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="4"/>
            <end position="153"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73959.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="153" mass="17004" checksum="C0F30DBAAB32D93D" modified="2015-12-09" version="1">MSKTEIKALGLDDAHQLAPLIAENAQALKRGAPRRPDEFYAERILGDKTAEVLGAFNGDTLIGFAVYFDLPELITGLRIGQLDDIYVHPDHRNQGIGRKLIETLVAEGQSRGWLHLRWIVPGKNTPAVALYEKIAEPDHRKSYVIPIDRIAGD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AH33</accession>
    <name>A0A0M7AH33_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03369</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72924.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72924">
        <property type="protein sequence ID" value="CTQ72924"/>
        <property type="gene ID" value="LAX5112_03369"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ72924.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="53" mass="6104" checksum="54F3ED25009892E5" modified="2015-12-09" version="1">MAVFFLPEASPVLEFYGYQFLKFAKCEEVIQRLRRIVDKSLIFLGTISEGVGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHF8</accession>
    <name>A0A0M7AHF8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">UDP-3-O-acylglucosamine N-acyltransferase</fullName>
            <ecNumber evidence="7">2.3.1.191</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7 9" type="primary">lpxD</name>
        <name evidence="9" type="ORF">LAX5112_03455</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>a (3R)-hydroxyacyl-[ACP] + a UDP-3-O-[(3R)-3-hydroxyacyl]-alpha-D-glucosamine = a UDP-2-N,3-O-bis[(3R)-3-hydroxyacyl]-alpha-D-glucosamine + H(+) + holo-[ACP]</text>
            <dbReference type="Rhea" id="RHEA:53836"/>
            <dbReference type="Rhea" id="RHEA-COMP:9685"/>
            <dbReference type="Rhea" id="RHEA-COMP:9945"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:64479"/>
            <dbReference type="ChEBI" id="CHEBI:78827"/>
            <dbReference type="ChEBI" id="CHEBI:137740"/>
            <dbReference type="ChEBI" id="CHEBI:137748"/>
            <dbReference type="EC" id="2.3.1.191"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="7">Bacterial outer membrane biogenesis; LPS lipid A biosynthesis.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Homotrimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the transferase hexapeptide repeat family. LpxD subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.191" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73193.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672917.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03455"/>
    <dbReference type="EnsemblBacteria" id="CTQ73193">
        <property type="protein sequence ID" value="CTQ73193"/>
        <property type="gene ID" value="LAX5112_03455"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00973"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016410">
        <property type="term" value="F:N-acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009245">
        <property type="term" value="P:lipid A biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd03352">
        <property type="entry name" value="LbH_LpxD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00523">
        <property type="entry name" value="LpxD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001451">
        <property type="entry name" value="Hexapep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018357">
        <property type="entry name" value="Hexapep_transf_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007691">
        <property type="entry name" value="LpxD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011004">
        <property type="entry name" value="Trimer_LpxA-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020573">
        <property type="entry name" value="UDP_GlcNAc_AcTrfase_non-rep"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43378">
        <property type="entry name" value="PTHR43378"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00132">
        <property type="entry name" value="Hexapep"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04613">
        <property type="entry name" value="LpxD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51161">
        <property type="entry name" value="SSF51161"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01853">
        <property type="entry name" value="lipid_A_lpxD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00101">
        <property type="entry name" value="HEXAPEP_TRANSFERASES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7 9" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="2 7" id="KW-0441">Lipid A biosynthesis</keyword>
    <keyword evidence="1 7" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="5 7" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0677">Repeat</keyword>
    <keyword evidence="3 7 9" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="LpxD" evidence="8">
        <location>
            <begin position="33"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="7">
        <location>
            <position position="255"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022556"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00523"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF04613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ73193.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="345" mass="35545" checksum="9C22B4FEE174666F" modified="2015-12-09" version="1">MSEPKFFHFPEGIRLGDIAGWAEAELMNGALETEITGVAPLEDAGPGMLVFFDNTAYLDALTTTSAAGCLVSTRHKDKVPEGVAALVCKDAYRSWAKVLAQLFPEAMVPLEHGVEGVSERASVDGTASLEDGVCLEPGAVVGAGAEIGAGTVIRSNAVIGAGVRIGRDCVIGANCSVQHSILGNRVYFHPGVCCGQDGFGYAMGPGGHLKVPQVGRVVIQDDVEIGANTTIDRGANRDTVIGEGTKIDNQVQIGHNVVIGRHCVIVSQVGISGSATLEDYVAIGGQSGVGGHVTIGMGAQVAAVSVVSESLEAGGRYGGTPAKPVKQWFREVAAVRKLAERGGKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIS7</accession>
    <name>A0A0M7AIS7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Ribosomal RNA large subunit methyltransferase H</fullName>
            <ecNumber evidence="4">2.1.1.177</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">23S rRNA (pseudouridine1915-N3)-methyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="4">23S rRNA m3Psi1915 methyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="4">rRNA (pseudouridine-N3-)-methyltransferase RlmH</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="4 5" type="primary">rlmH</name>
        <name evidence="5" type="ORF">LAX5112_03619</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>pseudouridine(1915) in 23S rRNA + S-adenosyl-L-methionine = H(+) + N(3)-methylpseudouridine(1915) in 23S rRNA + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:42752"/>
            <dbReference type="Rhea" id="RHEA-COMP:10221"/>
            <dbReference type="Rhea" id="RHEA-COMP:10222"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:65314"/>
            <dbReference type="ChEBI" id="CHEBI:74486"/>
            <dbReference type="EC" id="2.1.1.177"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="4">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the RNA methyltransferase RlmH family.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.177" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73673.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672970.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03619"/>
    <dbReference type="EnsemblBacteria" id="CTQ73673">
        <property type="protein sequence ID" value="CTQ73673"/>
        <property type="gene ID" value="LAX5112_03619"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070038">
        <property type="term" value="F:rRNA (pseudouridine-N3-)-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd18081">
        <property type="entry name" value="RlmH-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1280.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00658">
        <property type="entry name" value="23SrRNA_methyltr_H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029028">
        <property type="entry name" value="Alpha/beta_knot_MTases"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003742">
        <property type="entry name" value="RlmH-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029026">
        <property type="entry name" value="tRNA_m1G_MTases_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33603">
        <property type="entry name" value="PTHR33603"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02590">
        <property type="entry name" value="SPOUT_MTase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004505">
        <property type="entry name" value="MT_bac"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75217">
        <property type="entry name" value="SSF75217"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="1 4 5" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0698">rRNA processing</keyword>
    <keyword evidence="3 4" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="2 4 5" id="KW-0808">Transferase</keyword>
    <feature type="region of interest" description="S-adenosyl-L-methionine binding" evidence="4">
        <location>
            <begin position="127"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="76"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="108"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00658"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ73673.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="160" mass="17620" checksum="2C2F347AAEA3298C" modified="2015-12-09" version="1">MRFSLICIGRMKAGADKDLFDRYMDRARKSGRALGITDVGLSEMQESRAQRAEDRKADEARAIVASLSPGAKLVVLDENGKNLTSPAFSDRLEKWKDDGAPDIVFAIGGADGHGQEVLARADLKLAFGAMTWPHQIARILLAEQIYRAITIQSGHPYHRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJ32</accession>
    <name>A0A0M7AJ32_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Pantothenate synthetase</fullName>
            <shortName evidence="5">PS</shortName>
            <ecNumber evidence="5">6.3.2.1</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Pantoate--beta-alanine ligase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="5">Pantoate-activating enzyme</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5 6" type="primary">panC</name>
        <name evidence="6" type="ORF">LAX5112_03593</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 5">
            <text>(R)-pantoate + ATP + beta-alanine = (R)-pantothenate + AMP + diphosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:10912"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15980"/>
            <dbReference type="ChEBI" id="CHEBI:29032"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57966"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.3.2.1"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 5">Cofactor biosynthesis; (R)-pantothenate biosynthesis; (R)-pantothenate from (R)-pantoate and beta-alanine: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="miscellaneous">
        <text evidence="5">The reaction proceeds by a bi uni uni bi ping pong mechanism.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 5">Belongs to the pantothenate synthetase family.</text>
    </comment>
    <dbReference type="EC" id="6.3.2.1" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73604.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672949.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03593"/>
    <dbReference type="EnsemblBacteria" id="CTQ73604">
        <property type="protein sequence ID" value="CTQ73604"/>
        <property type="gene ID" value="LAX5112_03593"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00028">
        <property type="reaction ID" value="UER00005"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004592">
        <property type="term" value="F:pantoate-beta-alanine ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015940">
        <property type="term" value="P:pantothenate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00560">
        <property type="entry name" value="PanC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1300.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00158">
        <property type="entry name" value="PanC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004821">
        <property type="entry name" value="Cyt_trans-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003721">
        <property type="entry name" value="Pantoate_ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042176">
        <property type="entry name" value="Pantoate_ligase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21299:SF1">
        <property type="entry name" value="PTHR21299:SF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02569">
        <property type="entry name" value="Pantoate_ligase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00125">
        <property type="entry name" value="cyt_tran_rel"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00018">
        <property type="entry name" value="panC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 6" id="KW-0436">Ligase</keyword>
    <keyword evidence="5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4 5" id="KW-0566">Pantothenate biosynthesis</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" description="Proton donor" evidence="5">
        <location>
            <position position="37"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="30"/>
            <end position="37"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="61"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="147"/>
            <end position="150"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="153"/>
        </location>
        <ligand>
            <name>(R)-pantoate</name>
            <dbReference type="ChEBI" id="CHEBI:15980"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="176"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="184"/>
            <end position="187"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004990"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009256"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022655"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00158"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ73604.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="283" mass="30942" checksum="8C5A992958294F58" modified="2015-12-09" version="1">MRICRTKADMRALVRAWRQSGETTAVVPTMGYLHEGHLSLVRKAKTEADRVVTTIFVNPTQFGPNEDLATYPRDEDRDLALLRAEAVDAVFMPSVDEMYGDGGDTYVEVPGLSAILQGALRPGHFRGVSTVVAKLFNIVTPDIAVFGEKDYQQLILIKQMVRDLDAPLEILGHPTVREADGLAMSSRNVRLTEDQRTEAVALSRSLDKAKQLAETAPRIDDLEAAVRSVLSDAPSGQIESIDIRDAETLAELSGALDRPAVILLAVRFGSVLLIDQRVVRPAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJY8</accession>
    <name>A0A0M7AJY8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Neu5Ac-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">siaP_1</name>
        <name evidence="4" type="ORF">LAX5112_03960</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the bacterial solute-binding protein 7 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74752.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008197394.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03960"/>
    <dbReference type="EnsemblBacteria" id="CTQ74752">
        <property type="protein sequence ID" value="CTQ74752"/>
        <property type="gene ID" value="LAX5112_03960"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071702">
        <property type="term" value="P:organic substance transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.190.170">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018389">
        <property type="entry name" value="DctP_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038404">
        <property type="entry name" value="TRAP_DctP_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33376">
        <property type="entry name" value="PTHR33376"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03480">
        <property type="entry name" value="DctP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809701" evidence="3">
        <location>
            <begin position="22"/>
            <end position="342"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ74752.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="342" mass="37196" checksum="2B05798F07671460" modified="2015-12-09" version="1">MDFKTVFGAALLALGATSVQAADHEFKLHHFLGEKAPAHSKMLVPWAKQVEENSGGKVSIEIYPAMTLGGRPPELINQVRDGVVDLVWTVNGYTPGLFPRSEVFELPGVHKNDTAATNLALKELFESDLKDDYKGVEVMFLHVHAGQGIHMRDTEVRSVADLKDKKIRIPTRTGAWVIEALGASPVAMPVPELPPALQKGVIDGAMIPWEIIPPLKIQEQTNYQIEGADKERFGTTVFQVSMNKDRWDSLPEDVQKAFRDASDAVWSKEVGDIWAGADDFGIGLAVKAGNTHITLTPEETAEFNAALEPVVGRWVEEVSSKGIDGSALVDKARAAVANNASN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKV8</accession>
    <name>A0A0M7AKV8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="12">Putative multidrug export ATP-binding/permease protein</fullName>
            <ecNumber evidence="12">3.6.3.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">LAX5112_04177</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.-" evidence="12"/>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75297.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673421.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04177"/>
    <dbReference type="EnsemblBacteria" id="CTQ75297">
        <property type="protein sequence ID" value="CTQ75297"/>
        <property type="gene ID" value="LAX5112_04177"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008643">
        <property type="term" value="P:carbohydrate transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1560.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011527">
        <property type="entry name" value="ABC1_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036640">
        <property type="entry name" value="ABC1_TM_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039421">
        <property type="entry name" value="Type_1_exporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24221">
        <property type="entry name" value="PTHR24221"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00664">
        <property type="entry name" value="ABC_membrane"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90123">
        <property type="entry name" value="SSF90123"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50929">
        <property type="entry name" value="ABC_TM1F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 8 12" id="KW-0067">ATP-binding</keyword>
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    <keyword evidence="4 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0762">Sugar transport</keyword>
    <keyword evidence="3 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="42"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="84"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="158"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
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            <begin position="187"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="273"/>
            <end position="294"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="11">
        <location>
            <begin position="43"/>
            <end position="330"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="10">
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            <begin position="364"/>
            <end position="603"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="397"/>
            <end position="404"/>
        </location>
        <ligand>
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            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
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        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022597"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ75297.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="625" mass="68959" checksum="DD3635983BBF2841" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALB8</accession>
    <name>A0A0M7ALB8_9HYPH</name>
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        <submittedName>
            <fullName evidence="8">TRAP-type C4-dicarboxylate transport system, small permease component</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">LAX5112_04326</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
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        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
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            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000022">
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        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04326"/>
    <dbReference type="EnsemblBacteria" id="CTQ75679">
        <property type="protein sequence ID" value="CTQ75679"/>
        <property type="gene ID" value="LAX5112_04326"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
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    </dbReference>
    <dbReference type="GO" id="GO:0016021">
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04290">
        <property type="entry name" value="DctQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
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    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
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    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
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    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
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            <end position="68"/>
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    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
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            <end position="108"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="128"/>
            <end position="147"/>
        </location>
    </feature>
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            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
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        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ75679.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="168" mass="18668" checksum="76CE40432B1D3954" modified="2015-12-09" version="1">MTALKKTYDALIDTMAIAAGATLVWLMVSVVGSVLMRNMGMQPFAWLFTSAEYGLLYMTMLGAPWLVREKGHVHIELITSILPPAVRNVVSRSVALACVLVCLILAWQGVELLLKNIERGDYDTRAYYYPRWLLTISFPVSFGLMAIEFSRFVAGPDTLHTGEAGIHE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALF6</accession>
    <name>A0A0M7ALF6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Flagellar hook-length control protein FliK</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_04207</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
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        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000020">
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        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04207"/>
    <dbReference type="EnsemblBacteria" id="CTQ75371">
        <property type="protein sequence ID" value="CTQ75371"/>
        <property type="gene ID" value="LAX5112_04207"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
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    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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    </dbReference>
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    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0966">Cell projection</keyword>
    <keyword evidence="3" id="KW-0969">Cilium</keyword>
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    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
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        <location>
            <begin position="380"/>
            <end position="462"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="48"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="267"/>
            <end position="286"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="459"/>
            <end position="498"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="54"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="459"/>
            <end position="484"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02120"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ75371.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="516" mass="53241" checksum="F133F257227BCB0C" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AM43</accession>
    <name>A0A0M7AM43_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04261</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
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        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75496.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75496">
        <property type="protein sequence ID" value="CTQ75496"/>
        <property type="gene ID" value="LAX5112_04261"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ75496.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="189" mass="20381" checksum="32EF050C784C2273" modified="2015-12-09" version="1">MPVSLKIDPRACLVGLVSVIVSRGGLIGGEAPAFLFEFHYLEPKPGTKTGRCSHCQRPLSGPERPIEPATCPVLVCLEGRAQLLRQSGRKGAVSAVGASRCLSSLVFAAKLDRVLTRDVFEILVSISSGHDFLNLGARTLPEPKATAVRCTAPEGRSLFSLTSYVLFFLWEAPLSINPGSLRFLLFQLC</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMN4</accession>
    <name>A0A0M7AMN4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04258</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75490.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75490">
        <property type="protein sequence ID" value="CTQ75490"/>
        <property type="gene ID" value="LAX5112_04258"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ75490.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="34" mass="3884" checksum="3CEAFA4AA7A87AC6" modified="2015-12-09" version="1">MVTKTKRADFRPGTKYGAYVGFEIHDRSKAAMLH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APD7</accession>
    <name>A0A0M7APD7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Transaldolase/EF-hand domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_04549</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000025">
        <property type="protein sequence ID" value="CTQ76286.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673735.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000025.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04549"/>
    <dbReference type="EnsemblBacteria" id="CTQ76286">
        <property type="protein sequence ID" value="CTQ76286"/>
        <property type="gene ID" value="LAX5112_04549"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011992">
        <property type="entry name" value="EF-hand-dom_pair"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018247">
        <property type="entry name" value="EF_Hand_1_Ca_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002048">
        <property type="entry name" value="EF_hand_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13202">
        <property type="entry name" value="EF-hand_5"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SMART" id="SM00054">
        <property type="entry name" value="EFh"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47473">
        <property type="entry name" value="SSF47473"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00018">
        <property type="entry name" value="EF_HAND_1"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50222">
        <property type="entry name" value="EF_HAND_2"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809576" evidence="2">
        <location>
            <begin position="30"/>
            <end position="320"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="3">
        <location>
            <begin position="91"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="3">
        <location>
            <begin position="130"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="3">
        <location>
            <begin position="280"/>
            <end position="315"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="168"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="292"/>
            <end position="320"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="168"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="306"/>
            <end position="320"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50222"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ76286.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="320" mass="34447" checksum="B1B90C8C5FE26F5E" modified="2015-12-09" version="1">MKPFKTIAIAALAASVAGTALTAGLPAYAQSGAANAGGGQNNPAVAEQSLAHMGDRGGYERGHGPRGGRHMAKRIFERFDVDKDGAITQAEIEEVRTADFAAADTNGDGEISLEEFKAAFLDRSNDRMVRVFQRLDRDGDGIVTQAEVDRMANRMFNRLDRDDNGVVEKVRGGKRGHDGGGKKAEAGKRGEHGKRHAHGRRGGPAGMFMAVFDTDGTGSVTREDFDAKRAELFALADTNGSGSFALEDFGPLWLAMNDARIVDMFQRADADGSLGITAEEQEQAMSKMLNRVDRNGDGVITKSDFKRGHKGKHGKHRDRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APS4</accession>
    <name>A0A0M7APS4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04358</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75783.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75783">
        <property type="protein sequence ID" value="CTQ75783"/>
        <property type="gene ID" value="LAX5112_04358"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809512" evidence="1">
        <location>
            <begin position="23"/>
            <end position="267"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75783.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="267" mass="28348" checksum="78270CD09A865788" modified="2015-12-09" version="1">MKFVLPISAMLAGSLFCGFAFAQSQTAAPVQGDPAPPPAYDYVQQAGTMTFDGSTLTLNDANTGVLFFSERPYRLGGQVSNADFSEYWNAGNTFADVPPNAVVSVLSQTGTAPALVELTSAKTEGSSVVYDVKVLRGDLPESATGVALFIDHGPRPHHHGATAAAPGAAPGSVGFEPYGPYCYHAPQDPRCRAWHHPVHPYHPYYPPYGPYYHPGAAYAAGVATGAAIANANKQPAYYYYPIPTGALPPNCWINSQHTQMVCTVPIQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQ06</accession>
    <name>A0A0M7AQ06_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative lipid kinase YegS</fullName>
            <ecNumber evidence="2">2.7.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yegS</name>
        <name evidence="2" type="ORF">LAX5112_04765</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.7.1.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000030">
        <property type="protein sequence ID" value="CTQ76979.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673928.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000030.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04765"/>
    <dbReference type="EnsemblBacteria" id="CTQ76979">
        <property type="protein sequence ID" value="CTQ76979"/>
        <property type="gene ID" value="LAX5112_04765"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003951">
        <property type="term" value="F:NAD+ kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008654">
        <property type="term" value="P:phospholipid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017438">
        <property type="entry name" value="ATP-NAD_kinase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005218">
        <property type="entry name" value="Diacylglycerol/lipid_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001206">
        <property type="entry name" value="Diacylglycerol_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016064">
        <property type="entry name" value="NAD/diacylglycerol_kinase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045540">
        <property type="entry name" value="YegS/DAGK_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00781">
        <property type="entry name" value="DAGK_cat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19279">
        <property type="entry name" value="YegS_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00046">
        <property type="entry name" value="DAGKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF111331">
        <property type="entry name" value="SSF111331"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00147">
        <property type="entry name" value="TIGR00147"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50146">
        <property type="entry name" value="DAGK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="DAGKc" evidence="1">
        <location>
            <begin position="1"/>
            <end position="140"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76979.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="302" mass="32655" checksum="156738247949DBA7" modified="2015-12-09" version="1">MSKRHLRLILNGKSAGRADVRSAVDAVRNMGHEVSVRVTYEAGDTERFALEALKEDQENKIDVLVSGGGDGTIHAVVDGVLGGLEAEDKPPFAFAVLPLGTANDFAHHIRLDPSDIVSSFRFAARGKPKPTDIGTVNGRVFVNMATGGFGTRVTAETDPNLKKLLGGAAYLFTGINRFSELAACEGRIETDGFSWEGAFMALAIGNGRRAGGGIRLCPTAELDDGFLDLTILPMPDRNRVTEFLSIVLEGDPERIPEIAIMRKVKSLKIEADNQVQVNLDGEPLHASRLDIETHPARIEMIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQ69</accession>
    <name>A0A0M7AQ69_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Acid-resistance membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04664</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000028">
        <property type="protein sequence ID" value="CTQ76661.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76661">
        <property type="protein sequence ID" value="CTQ76661"/>
        <property type="gene ID" value="LAX5112_04664"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005325">
        <property type="entry name" value="DUF308_memb"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03729">
        <property type="entry name" value="DUF308"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="23"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="50"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="75"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="101"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="131"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="157"/>
            <end position="179"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76661.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="187" mass="19940" checksum="E3C3C7CF5E7EE534" modified="2015-12-09" version="1">MAETATELATDFKQAIKEGKSSLMWVGILMAVVGAIAIFFPFAATVTTNYMVGFLFLFYGALGVWHSFSIKGTGPFFGALLMGLITVVAGVLLIANPLEGILLLTLTVGIVFIFEGAYQIFAALEYRPAKGWGWMLVSAIISIAAGLLIVSKLPGTSLFVLGLIMGINFLSTGISMIMLSRSVDEIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQ95</accession>
    <name>A0A0M7AQ95_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 7">UDP-glucose 6-dehydrogenase</fullName>
            <ecNumber evidence="4 7">1.1.1.22</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">algD</name>
        <name evidence="12" type="ORF">LAX5112_04867</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>H2O + 2 NAD(+) + UDP-alpha-D-glucose = 3 H(+) + 2 NADH + UDP-alpha-D-glucuronate</text>
            <dbReference type="Rhea" id="RHEA:23596"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:58052"/>
            <dbReference type="ChEBI" id="CHEBI:58885"/>
            <dbReference type="EC" id="1.1.1.22"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Nucleotide-sugar biosynthesis; UDP-alpha-D-glucuronate biosynthesis; UDP-alpha-D-glucuronate from UDP-alpha-D-glucose: step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 7">Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.22" evidence="4 7"/>
    <dbReference type="EMBL" id="CXWD01000033">
        <property type="protein sequence ID" value="CTQ77305.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674015.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000033.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04867"/>
    <dbReference type="EnsemblBacteria" id="CTQ77305">
        <property type="protein sequence ID" value="CTQ77305"/>
        <property type="gene ID" value="LAX5112_04867"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00038">
        <property type="reaction ID" value="UER00491"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
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        <property type="match status" value="1"/>
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    </dbReference>
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    </dbReference>
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        <location>
            <begin position="342"/>
            <end position="457"/>
        </location>
    </feature>
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        <ligand>
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        <ligand>
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        <ligand>
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        </ligand>
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        <location>
            <position position="235"/>
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        <ligand>
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        <ligand>
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        </ligand>
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        <ligand>
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        <location>
            <position position="356"/>
        </location>
        <ligand>
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        </ligand>
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    <evidence type="ECO:0000256" key="1">
        <source>
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        </source>
    </evidence>
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        <source>
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        <source>
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    </evidence>
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        <source>
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    </evidence>
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        <source>
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        </source>
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        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
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    </evidence>
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        </source>
    </evidence>
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        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
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        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
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        </source>
    </evidence>
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        <source>
            <dbReference type="SMART" id="SM00984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ77305.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="469" mass="50288" checksum="972BC5A7A4CCF7E7" modified="2015-12-09" version="1">MKMHVGKFEAVQTLDAFDWRLIETKDTISVIGLGYVGAVSLACLSSLGHKVIGADIDAKKVDSISWGQSPIVEDQLGDLLTAGVNDELLTATTDVAQAVMDSDVTFVSVGTPTSENGGCDTRAIKAVARSIGTAIAAKDAFHVVVLRCSVPPGTTLEIMTPIIEEVSGKRAGRDFGVCFNPEFLREGTAVADFHAPPKTVIGVTDERTANIMKKIYAPVDDNPIVTSVDVAELVKYVDNVWHATKVSFANEVGRLCKPMGIDSHKVMDIFVQDTKLNLSPYYLKPGFAFGGSCLPKEVRAVSHLAEQLNVNVPLIDSLIPTNDQQVEEAIEMVRKTGAKKAAILGVAFKPGTDDLRESPVLEVIAALRAEGVEVTAYDPAIVPGPHIAQQFEYMQHASPHLKAVVDALPDFLKQTPEEAIADADAIIVSQNGPAIRSVMRSKKEDAAVVDLVRLHAEPPACSRYAGIGW</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQN0</accession>
    <name>A0A0M7AQN0_9HYPH</name>
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        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
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    <gene>
        <name evidence="1" type="ORF">LAX5112_04913</name>
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        <name type="scientific">Roseibium alexandrii</name>
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        <lineage>
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                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
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            <strain evidence="2">CECT 5112</strain>
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    <dbReference type="EMBL" id="CXWD01000034">
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        <property type="nucleotide sequence ID" value="NZ_CXWD01000034.1"/>
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        <source>
            <dbReference type="EMBL" id="CTQ77445.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="116" mass="12223" checksum="CE20E71D464B1685" modified="2015-12-09" version="1">MATSCHLSPPAQTPAHTPASGYILAKTAKSGIFYFFTGVFTTVNTETGDLLVGETGLFPGDAFLYESRLTAQRIANQLNRAGIGSHWHAVPASTPFEIPFAPIAHPGVRETAPPAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQY8</accession>
    <name>A0A0M7AQY8_9HYPH</name>
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        <submittedName>
            <fullName evidence="6">L-aspartate transporter</fullName>
        </submittedName>
    </protein>
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        <name evidence="6" type="primary">yveA</name>
        <name evidence="6" type="ORF">LAX5112_04521</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
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    <reference evidence="7" key="1">
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            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
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            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
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            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
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    <dbReference type="EnsemblBacteria" id="CTQ76213">
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        <property type="gene ID" value="LAX5112_04521"/>
    </dbReference>
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        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
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        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="project" value="InterPro"/>
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        <property type="entry name" value="AA/rel_permease1"/>
    </dbReference>
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        <property type="entry name" value="AA_permease_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
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        <location>
            <begin position="7"/>
            <end position="27"/>
        </location>
    </feature>
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            <end position="63"/>
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    </feature>
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            <end position="143"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="155"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="194"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
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            <end position="251"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
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            <end position="290"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="334"/>
            <end position="353"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="359"/>
            <end position="380"/>
        </location>
    </feature>
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        <location>
            <begin position="392"/>
            <end position="413"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="419"/>
            <end position="435"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="456"/>
            <end position="476"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="482"/>
            <end position="501"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ76213.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="536" mass="56862" checksum="2E79129BBE5673EE" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARP3</accession>
    <name>A0A0M7ARP3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Xylose transport system permease protein XylH</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">xylH</name>
        <name evidence="2" type="ORF">LAX5112_04744</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000030">
        <property type="protein sequence ID" value="CTQ76920.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04744"/>
    <dbReference type="EnsemblBacteria" id="CTQ76920">
        <property type="protein sequence ID" value="CTQ76920"/>
        <property type="gene ID" value="LAX5112_04744"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
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    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="21"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="68"/>
            <end position="84"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76920.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="90" mass="9085" checksum="53841D68AF8E875B" modified="2015-12-09" version="1">MAAARLGFSTNDIGTLDELRVIAAAVIGGTALAGGVGTIYGAILGALIMQSLQSGMAMVGVDAPLQNIVVGTVLVLAVLVDIIYRKRTGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ART0</accession>
    <name>A0A0M7ART0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Inner membrane protein YabI</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">yabI</name>
        <name evidence="5" type="ORF">LAX5112_04758</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the DedA family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000030">
        <property type="protein sequence ID" value="CTQ76960.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673923.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000030.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04758"/>
    <dbReference type="EnsemblBacteria" id="CTQ76960">
        <property type="protein sequence ID" value="CTQ76960"/>
        <property type="gene ID" value="LAX5112_04758"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032818">
        <property type="entry name" value="DedA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025902">
        <property type="entry name" value="LssY-like-C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036938">
        <property type="entry name" value="P_Acid_Pase_2/haloperoxi_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000326">
        <property type="entry name" value="P_Acid_Pase_2/haloperoxidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032816">
        <property type="entry name" value="SNARE_assoc"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30353">
        <property type="entry name" value="PTHR30353"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14067">
        <property type="entry name" value="LssY_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01569">
        <property type="entry name" value="PAP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09335">
        <property type="entry name" value="SNARE_assoc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00014">
        <property type="entry name" value="acidPPc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48317">
        <property type="entry name" value="SSF48317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="31"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="62"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="151"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="179"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="241"/>
            <end position="262"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="293"/>
            <end position="319"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="326"/>
            <end position="347"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="367"/>
            <end position="384"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="396"/>
            <end position="415"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="421"/>
            <end position="440"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="447"/>
            <end position="469"/>
        </location>
    </feature>
    <feature type="domain" description="acidPPc" evidence="4">
        <location>
            <begin position="327"/>
            <end position="436"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010792"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ76960.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="679" mass="73276" checksum="7443F2E96AA59FDE" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ATD2</accession>
    <name>A0A0M7ATD2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_05008</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000040">
        <property type="protein sequence ID" value="CTQ77676.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674133.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000040.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_05008"/>
    <dbReference type="EnsemblBacteria" id="CTQ77676">
        <property type="protein sequence ID" value="CTQ77676"/>
        <property type="gene ID" value="LAX5112_05008"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="2"/>
            <end position="143"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77676.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="183" mass="19765" checksum="2B72ACCCCD3C49BE" modified="2015-12-09" version="1">MIDIVDEVQAHVCAREALLDLSFGLDRHLKTSERLREGRLPVFAFTALDANGKLVGTVRLWAVADRWEHQSLLLGPLAVDPQCRGLKVGDRLMRHALNQAALHGHGSVLLVGDLPYYERFGFAAGLLEDVMLPGPVDYRRFLGLELAPGHLAGLDGTLIADGVLDSSASFFDAGDGLALSKLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AU20</accession>
    <name>A0A0M7AU20_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">L-Lysine-8-amino-7-oxononanoate aminotransferase</fullName>
            <ecNumber evidence="3">2.6.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">bioK</name>
        <name evidence="3" type="ORF">LAX5112_04800</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.6.1.-" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000031">
        <property type="protein sequence ID" value="CTQ77094.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673961.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000031.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04800"/>
    <dbReference type="EnsemblBacteria" id="CTQ77094">
        <property type="protein sequence ID" value="CTQ77094"/>
        <property type="gene ID" value="LAX5112_04800"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008483">
        <property type="term" value="F:transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00610">
        <property type="entry name" value="OAT_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005814">
        <property type="entry name" value="Aminotrans_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00202">
        <property type="entry name" value="Aminotran_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00600">
        <property type="entry name" value="AA_TRANSFER_CLASS_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="1 2" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU003560"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ77094.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="438" mass="47136" checksum="B7D79D810D0CA678" modified="2015-12-09" version="1">MSHVFPRHTKASTPVAVGGDGCYIIDSNGKKYFDGSGGAAVSCLGHSDPDVTAAIKGQVDQIAFAHTGFFTSEPAEQLADLLIDHAPGNLDRVYFVSGGSEAMEAALKLARQYFLEIGETSRHRVIARRQSYHGNTLGALATGGNQWRREPFAPLMIETSHISPCYEYRGRAADETAVEYGQRVANELETEIQRLGAENVMAFVAEPVVGATAGAVPPVEGYFKRIREICDHYGILLILDEVMCGMGRTGSLFACEQDGIAPDILAIAKGLGAGYQPIGAMLCTSEIYEAIENGSGFFQHGHTYIGHPMACAASLAVLKKLTGGLVDQVHPLGDKLDGTLRDAFGQHPYVGDIRGRGLFRGIEIVEDRESKTPFDTKRGVNKALKKAAFEAGLICYPMGGTIDGVKGDHILLAPPFIMEDQHISEITDKLQTAFKAVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AUV9</accession>
    <name>A0A0M7AUV9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04958</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000037">
        <property type="protein sequence ID" value="CTQ77573.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674097.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000037.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04958"/>
    <dbReference type="EnsemblBacteria" id="CTQ77573">
        <property type="protein sequence ID" value="CTQ77573"/>
        <property type="gene ID" value="LAX5112_04958"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="283"/>
            <end position="302"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="307"/>
            <end position="386"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="653"/>
            <end position="672"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="328"/>
            <end position="381"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77573.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="672" mass="75890" checksum="0125E377DEBAB6DD" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZLT1</accession>
    <name>A0A0M6ZLT1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_00044</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63725.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ63725">
        <property type="protein sequence ID" value="CTQ63725"/>
        <property type="gene ID" value="LAX5112_00044"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005808836" evidence="2">
        <location>
            <begin position="22"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="31"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="33"/>
            <end position="60"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ63725.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="81" mass="8680" checksum="5C03A7261B6D6457" modified="2015-12-09" version="1">MRVRRDLCLVFLGASILQSCAVGPGTPLVKAVNPDQKTRSGTVQPPTGYGPPNASVQSKGLINPLERAETEEYLKTLADEQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZNJ7</accession>
    <name>A0A0M6ZNJ7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00258</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64328.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670242.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ64328">
        <property type="protein sequence ID" value="CTQ64328"/>
        <property type="gene ID" value="LAX5112_00258"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ64328.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="94" mass="10524" checksum="6FC95218E0BE9C58" modified="2015-12-09" version="1">MNLSILSDNYKVYVCNHVFQNQRSVTLAVLEDGDLSLLCGEDDHSDSAADYKVAGFRHIADNNPHIVRIENLNDGNEAIFNATGQWIFSPLEEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZNL6</accession>
    <name>A0A0M6ZNL6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Acetyl-CoA acetyltransferase</fullName>
            <ecNumber evidence="7">2.3.1.9</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">thlA</name>
        <name evidence="7" type="ORF">LAX5112_00265</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the thiolase-like superfamily. Thiolase family.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.9" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64348.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670247.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00265"/>
    <dbReference type="EnsemblBacteria" id="CTQ64348">
        <property type="protein sequence ID" value="CTQ64348"/>
        <property type="gene ID" value="LAX5112_00265"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003985">
        <property type="term" value="F:acetyl-CoA C-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd00751">
        <property type="entry name" value="thiolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.47.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002155">
        <property type="entry name" value="Thiolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016039">
        <property type="entry name" value="Thiolase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020615">
        <property type="entry name" value="Thiolase_acyl_enz_int_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020610">
        <property type="entry name" value="Thiolase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020617">
        <property type="entry name" value="Thiolase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020616">
        <property type="entry name" value="Thiolase_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02803">
        <property type="entry name" value="Thiolase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00108">
        <property type="entry name" value="Thiolase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000429">
        <property type="entry name" value="Ac-CoA_Ac_transf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53901">
        <property type="entry name" value="SSF53901"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01930">
        <property type="entry name" value="AcCoA-C-Actrans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00098">
        <property type="entry name" value="THIOLASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00099">
        <property type="entry name" value="THIOLASE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4 7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Thiolase_N" evidence="5">
        <location>
            <begin position="9"/>
            <end position="266"/>
        </location>
    </feature>
    <feature type="domain" description="Thiolase_C" evidence="6">
        <location>
            <begin position="275"/>
            <end position="395"/>
        </location>
    </feature>
    <feature type="active site" description="Acyl-thioester intermediate" evidence="3">
        <location>
            <position position="93"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="3">
        <location>
            <position position="353"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="3">
        <location>
            <position position="383"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR000429-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003557"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00108"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF02803"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ64348.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="397" mass="40791" checksum="24CB6FC15267E65F" modified="2015-12-09" version="1">MPTTQDRPIVISAARRTPLGAFMGALASVPSTLLGATAISAVLKDAGVSENVVDEALMGCVLPAGLGQAPARQAARASGLPDSCGATTINKVCGSGMKSVMLGHDLLKAGSAGIVVAGGMESMSRAPFLLPDMRGGRKAGSSEVIDHMMRDGLEDAYETGRPMGAFGEATAEKYQFSRSDQDGYAMETLERAQSAVLNGTFASEIVPVPVQTRKATILVEKDERPPQINSAKIPDLRAAFGENGTITAASSSANADGAAALVLTSSETAEERGMPVLAHILGHATHAQAPAWFTTAPIPAIQKLIKQIGWRVEDVDLFEINEAFAVVAMAAAKELGIPRGKLNVNGGACALGHPIGATGARIVVTLLHALKARGLKKGIASLCIGGGEATAIAIQLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZP90</accession>
    <name>A0A0M6ZP90_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Protein phosphatase CheZ</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Chemotaxis protein CheZ</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_00329</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the CheZ family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64589.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451527.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00329"/>
    <dbReference type="EnsemblBacteria" id="CTQ64589">
        <property type="protein sequence ID" value="CTQ64589"/>
        <property type="gene ID" value="LAX5112_00329"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009288">
        <property type="term" value="C:bacterial-type flagellum"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0097588">
        <property type="term" value="P:archaeal or bacterial-type flagellum-dependent cell motility"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006935">
        <property type="term" value="P:chemotaxis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050920">
        <property type="term" value="P:regulation of chemotaxis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007439">
        <property type="entry name" value="Chemotax_Pase_CheZ"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04344">
        <property type="entry name" value="CheZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0145">Chemotaxis</keyword>
    <keyword evidence="5" id="KW-0283">Flagellar rotation</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005908"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00018484"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022500"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022779"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00029599"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ64589.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="251" mass="27575" checksum="245ADA0739506B42" modified="2015-12-09" version="1">MTAVKRSFRAETLIRMESVSNTDPAFAEERRHQEVLAELSTLKAMIQSGEGQEQKAALDPEAMSQKFISEFRKELSEAAKLKVELDAIYEAIAQTKKEIATLHHKTGSEGEDMTRVTNELDAVVVGTEGATESILSAAEFIDETANTLSARLKGQDSELAGDIQDRVIQIFEACNFQDLTGQRITKVVGTLRFVEDRIMQMMDIWGGIESFKDIEVEEAKAAEGDAALLNGPALESDIDVATQDDIDALFA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPH0</accession>
    <name>A0A0M6ZPH0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00350</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64648.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670340.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00350"/>
    <dbReference type="EnsemblBacteria" id="CTQ64648">
        <property type="protein sequence ID" value="CTQ64648"/>
        <property type="gene ID" value="LAX5112_00350"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008523">
        <property type="entry name" value="DUF805"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34980">
        <property type="entry name" value="PTHR34980"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05656">
        <property type="entry name" value="DUF805"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="70"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="108"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="138"/>
            <end position="158"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64648.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="174" mass="20457" checksum="EC85EF857E003270" modified="2015-12-09" version="1">MNNRKEFGRRGIDETRTKRNPVYIGAQHYTAPAKSEQSSSFQDDDDVSIGTILLNSVAFMFSFEGRLGRAMYWYLHTIHILILIFFVALMFSNEHLKDYTFLEFFSEYFWLMPFVFLNSLFSWSVTVRRMHDRGVSGYWVFSWFIPIAGSIILLVQTFKNMFFAGTQGRNKYGI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQ01</accession>
    <name>A0A0M6ZQ01_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Adenylate cyclase 1</fullName>
            <ecNumber evidence="2">4.6.1.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">cyaA_3</name>
        <name evidence="2" type="ORF">LAX5112_00410</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="4.6.1.1" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64808.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670383.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00410"/>
    <dbReference type="EnsemblBacteria" id="CTQ64808">
        <property type="protein sequence ID" value="CTQ64808"/>
        <property type="gene ID" value="LAX5112_00410"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004016">
        <property type="term" value="F:adenylate cyclase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009190">
        <property type="term" value="P:cyclic nucleotide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035556">
        <property type="term" value="P:intracellular signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07302">
        <property type="entry name" value="CHD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1230">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001054">
        <property type="entry name" value="A/G_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00211">
        <property type="entry name" value="Guanylate_cyc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00044">
        <property type="entry name" value="CYCc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50125">
        <property type="entry name" value="GUANYLATE_CYCLASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Guanylate cyclase" evidence="1">
        <location>
            <begin position="241"/>
            <end position="379"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64808.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="435" mass="47210" checksum="E4E2144A9D3A3139" modified="2015-12-09" version="1">MTRHALDPSPRTYAASVQLLARSSRGPSCAPSDQTLDDVKTWLLNDATSIKDVMLMYEEFMWRCHAANLGIDRATLHVGTLHPRVIGFSWFWSALDGFCDEIAADANAIKHEAFTRNPLYKVMAEGEFVKVDLETDEGLNAFPIMTELAEEGYTNYVAIPLSAAGAMNNAMTLATTRKGGFQDGAKERIRSVIELFALHVERHIVQRIARNVADTYLGPIAGQRVLDGEIKRGDGEAIDAVVFMSDMRGFTQLADRMSGPEVTAILNAYFDRVSTSVLAHGGEILKFMGDGVLAVFDQKALGRKAAADAAVKAARAVLSAIDDFNETPPEDLPDPAVWHPIKIGIGLHMGEVFFGNVGGEERLDFTVIGRAVNETSRVESLCKPLGKTLLLTDPVRSALPTGLQSALDPMGDHELRGVGSPVAIYSAPTYDITMS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZR69</accession>
    <name>A0A0M6ZR69_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Omega-amino acid--pyruvate aminotransferase</fullName>
            <ecNumber evidence="3">2.6.1.18</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_00386</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.6.1.18" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64742.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670536.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00386"/>
    <dbReference type="EnsemblBacteria" id="CTQ64742">
        <property type="protein sequence ID" value="CTQ64742"/>
        <property type="gene ID" value="LAX5112_00386"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016223">
        <property type="term" value="F:beta-alanine-pyruvate transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00610">
        <property type="entry name" value="OAT_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005814">
        <property type="entry name" value="Aminotrans_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00202">
        <property type="entry name" value="Aminotran_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000521">
        <property type="entry name" value="Transaminase_4ab_Lys_Orn"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00600">
        <property type="entry name" value="AA_TRANSFER_CLASS_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="1 2" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="3" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU003560"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ64742.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="464" mass="51037" checksum="720DEDE140744A7B" modified="2015-12-09" version="1">MTAHSNIYPTKALQELDAAHHWHPFSDMKSLNAEGSRVITSADGVWLTDSNGNKILDGMAGLWCVQVGHGRSEITEAVTKQMNELAYYNTFFKTTHPPAIALSEKLAKLAPDHINTVFYCSSGSEANDTVFRMVRTYWDKMGKPDKKVIIGRWNGYHGSTLAGTSLGGMKAMHAQGDLPVSGVHHIDQPYWFGEGQDMSPEDFGVHVARKLEEAIDQIGEDKVAAFIAEPIQGAGGVIIPPETYWPEVKRILEERDILFVSDEVICGFGRLGEWFGSSYYGVKPDLMPIAKGLTSGYLPMGGVLVSDRVVEGLMLAGDDFNHGYTYSGHPVCAAAALANLEIIERDGLVDRVKTDIGPYLKERWLKLGEHELVGEARMTGLVGALELVPDKKNPTKKFSDVGVPGTLCRDVSFEHGMVMRAVRDSMIISPPLVLSHEEADHLVATAEKTLHDTYRILKRDGWMG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRC6</accession>
    <name>A0A0M6ZRC6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Neu5Ac permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">siaT_3</name>
        <name evidence="5" type="ORF">LAX5112_00351</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64650.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670341.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00351"/>
    <dbReference type="EnsemblBacteria" id="CTQ64650">
        <property type="protein sequence ID" value="CTQ64650"/>
        <property type="gene ID" value="LAX5112_00351"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010656">
        <property type="entry name" value="DctM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004681">
        <property type="entry name" value="TRAP_DctM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33362">
        <property type="entry name" value="PTHR33362"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06808">
        <property type="entry name" value="DctM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006066">
        <property type="entry name" value="HI0050"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="12"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="66"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="108"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="149"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="188"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="230"/>
            <end position="249"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="255"/>
            <end position="272"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="284"/>
            <end position="305"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="317"/>
            <end position="339"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="346"/>
            <end position="364"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="384"/>
            <end position="411"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="423"/>
            <end position="451"/>
        </location>
    </feature>
    <feature type="domain" description="DctM" evidence="4">
        <location>
            <begin position="12"/>
            <end position="446"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF06808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ64650.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="456" mass="48287" checksum="F2E8A4C49B863D9D" modified="2015-12-09" version="1">MTPFEVGLLMTGVLLVLVIMGVRVAFAAAFVGLVGLILHFSLKMGFERGFFVALKMAGTIPHSKSVTYALSVLPTFILIGFLAFYAGFTKQLFEAAKRWLGWMPGGMAVGTVFSTAGFAAVSGASVATAAVFARVAIPEMLKEGYSPRLSAAVVAAGGTLASLIPPSAILVIYAILVEQSVGKLLIAGFLPGVFSALIYVAIIVGVSAWRGDAPPIKGFTWKQRFESIPGTLPIVAVIGIIFCSFFFGLATPTEAGSLGAFVVLMVAFAKGMKFQQLGQALHETAKLTVMIFTLIWGVLVYVRFLGFAGLPEAFREFIVALEFSPWLIMICILLAYAVLGMFMDAIGMLILTLPVVYPAVMALNGGEGVSAADSTFGMSGEACAIWFGILVVKMAELCLITPPIGLNCFVVSGVRPDIPVQEVFRGCIPFFIADVLTIAGLLAFPSIITWLPSLMG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRL5</accession>
    <name>A0A0M6ZRL5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Putative D,D-dipeptide transport system permease protein DdpC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">ddpC_1</name>
        <name evidence="8" type="ORF">LAX5112_00612</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="6">Cell membrane</location>
            <topology evidence="6">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65419.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670568.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00612"/>
    <dbReference type="EnsemblBacteria" id="CTQ65419">
        <property type="protein sequence ID" value="CTQ65419"/>
        <property type="gene ID" value="LAX5112_00612"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025966">
        <property type="entry name" value="OppC_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12911">
        <property type="entry name" value="OppC_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="32"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="104"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="141"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="271"/>
            <end position="292"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="7">
        <location>
            <begin position="102"/>
            <end position="292"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ65419.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="305" mass="32735" checksum="76E492AF6F489C72" modified="2015-12-09" version="1">MTDTTLQSSAPSKVKVETPFQRFRAEFFESRIAATAFFVLLIIMVLAILAPWITPQNPYDLAQVDVLDGRLAPGSEAFAGYTMWLGSDGAGRDLYSAILYGLRISISVGLASGVIALFVGMVVGLIAAYSGGRTEAVIMRVVDLQLSFPAALVALMLVAALGKGIDKIILALVVAQWAYYARTVRATALVERGKEYVEAAQCLGLSKTRVVFRHILPNCLAPLIVVGTVQTAHAVSLEATLSFLGVGLPQTEPSLGVLIANGFEYMLSGRYWISVFPGIALLLTVASINLVGDQLRDVLNPRMKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRP5</accession>
    <name>A0A0M6ZRP5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Multiple sugar-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">msmE_1</name>
        <name evidence="7" type="ORF">LAX5112_00629</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the bacterial solute-binding protein 1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65449.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670584.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00629"/>
    <dbReference type="EnsemblBacteria" id="CTQ65449">
        <property type="protein sequence ID" value="CTQ65449"/>
        <property type="gene ID" value="LAX5112_00629"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006059">
        <property type="entry name" value="SBP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01547">
        <property type="entry name" value="SBP_bac_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0574">Periplasm</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="6">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005808920" evidence="6">
        <location>
            <begin position="25"/>
            <end position="420"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008520"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ65449.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="420" mass="47299" checksum="63B4C734596EA302" modified="2015-12-09" version="1">MRSMLKTSAAALAFFATATGGAFADGLTGDLKIFLDTSNPAPRATMEKMIADFQAENPDLNIETTVIDREAYKTQIRNFLTANAPDVANWYAANRMRPYVEAGLFEDVSDLWDGTEIGENLASTKGALTIDGKQWGVPYTYYQWGVYYRKDIFDELGLSEPTTWEEEKANCQKIIDAGKKCYTIGTKFLWTAGGWFDYLNMRTNGFDFHMDLLQGKEKWDSEKVRATFANWRELIDMGAFIDNHQTYSWQEALPFMVKGDAAAYLMGNFAVAPLRDAGLTDDQLDFYQFVEITPGIEMAEDAPTDTFHIPANAQNKDNAREFLKYVVSPDVQTWINDGKNLGQLPVNAKSSVDKDKFLEQGFEMLSTNSPGGVAQFFDRDAPAEMAKVAMEGMQEFMVKPDNLDKILARLDRSAKRIYKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZS14</accession>
    <name>A0A0M6ZS14_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Azoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00671</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65545.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670619.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00671"/>
    <dbReference type="EnsemblBacteria" id="CTQ65545">
        <property type="protein sequence ID" value="CTQ65545"/>
        <property type="gene ID" value="LAX5112_00671"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.360">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003680">
        <property type="entry name" value="Flavodoxin_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029039">
        <property type="entry name" value="Flavoprotein-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02525">
        <property type="entry name" value="Flavodoxin_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52218">
        <property type="entry name" value="SSF52218"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Flavodoxin_2" evidence="1">
        <location>
            <begin position="1"/>
            <end position="139"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65545.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="197" mass="22217" checksum="5F7A18E5B1623E16" modified="2015-12-09" version="1">MRVLVVFCHPCEESFNSALCKAVVETLQAGGHDIRLTDLYAKGFDPVMSAQERRGYHTPQANTIPVADDLADIKWCEAIVFVYPTWWFGLPAMLKGWLERVWVPHETFIMPTDTTGLQPNMQNISHIAIVTTCGASWWVSKLVGEPGRKTIMRGIKLLAKPGCKTRYLAHYKMDSSTLGSRKNYIETVKEKIAAFLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSR3</accession>
    <name>A0A0M6ZSR3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative metal-binding integral membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00310</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64473.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670285.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00310"/>
    <dbReference type="EnsemblBacteria" id="CTQ64473">
        <property type="protein sequence ID" value="CTQ64473"/>
        <property type="gene ID" value="LAX5112_00310"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018688">
        <property type="entry name" value="DUF2182_TM_metal-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09948">
        <property type="entry name" value="DUF2182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="77"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="102"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="142"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="180"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="240"/>
            <end position="269"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="281"/>
            <end position="303"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64473.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="308" mass="32752" checksum="50DF2B5AE21F072F" modified="2015-12-09" version="1">MTVLHSPDGLKPQIGEPQRGWPLVLLVVAALTVSGWSYLIVMVAAMVPSMDMAEAGPGMILFNQFNFMRGLPEEARAALAALCLPAGATFGMPGVALTGIDIAKIFMMWAMMALAMMLPSATPMVKAFHRYVSIEGTQAKSAFSATVAVVFGYLAVWIGYALVATAAQVGLSKIGALSDMMAPVSMALTTSVLLAAGLYQFTPAKRACLERCWYPRWSFARNQGDYSAQSAFREGLAQGWICLGCCWAVMTVMFAVGLMNILWIALLGAVMALEKTFPSRAFPIGIGIFLLVWGGALALGMVLGQGAT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTA2</accession>
    <name>A0A0M6ZTA2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Transcriptional regulator BetI</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">LAX5112_00586</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65320.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670515.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00586"/>
    <dbReference type="EnsemblBacteria" id="CTQ65320">
        <property type="protein sequence ID" value="CTQ65320"/>
        <property type="gene ID" value="LAX5112_00586"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036271">
        <property type="entry name" value="Tet_transcr_reg_TetR-rel_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025996">
        <property type="entry name" value="TetR_C_WHG"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13305">
        <property type="entry name" value="TetR_C_33"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00440">
        <property type="entry name" value="TetR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00455">
        <property type="entry name" value="HTHTETR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48498">
        <property type="entry name" value="SSF48498"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50977">
        <property type="entry name" value="HTH_TETR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH tetR-type" evidence="5">
        <location>
            <begin position="15"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="4">
        <location>
            <begin position="38"/>
            <end position="57"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ65320.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="204" mass="22583" checksum="F8ECC0DDA0D32709" modified="2015-12-09" version="1">MAKTEIHKKAGYHHGDLRGELIAAARQLIEEHGPDGFSMSDACRLAGVSTAAPYRHFSSKQDLLSEIAKDGLNRLGIDMEARASKQARGTVQSIAAMGRAYVAFARREPHTFRLMFSTMSHHDRIDELKQIGRGSYSVLLREVADYLGEPDINETVLRTSFPLWTQVHGLSFLAIDGKLDVTEFPVDIEGSILIATERLLPPVP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTP7</accession>
    <name>A0A0M6ZTP7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">CASPASE_P20 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00718</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65677.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670653.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00718"/>
    <dbReference type="EnsemblBacteria" id="CTQ65677">
        <property type="protein sequence ID" value="CTQ65677"/>
        <property type="gene ID" value="LAX5112_00718"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004197">
        <property type="term" value="F:cysteine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029030">
        <property type="entry name" value="Caspase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001309">
        <property type="entry name" value="Pept_C14_p20"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52129">
        <property type="entry name" value="SSF52129"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50208">
        <property type="entry name" value="CASPASE_P20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CASPASE_P20" evidence="1">
        <location>
            <begin position="31"/>
            <end position="166"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50208"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65677.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="726" mass="79801" checksum="153AA333EF66CF30" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUX6</accession>
    <name>A0A0M6ZUX6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Cation efflux system protein CzcA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">czcA_1</name>
        <name evidence="3" type="ORF">LAX5112_00584</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65314.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670513.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00584"/>
    <dbReference type="EnsemblBacteria" id="CTQ65314">
        <property type="protein sequence ID" value="CTQ65314"/>
        <property type="gene ID" value="LAX5112_00584"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.2090.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027463">
        <property type="entry name" value="AcrB_DN_DC_subdom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001036">
        <property type="entry name" value="Acrflvin-R"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32063">
        <property type="entry name" value="PTHR32063"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00873">
        <property type="entry name" value="ACR_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00702">
        <property type="entry name" value="ACRIFLAVINRP"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82714">
        <property type="entry name" value="SSF82714"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="336"/>
            <end position="353"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="360"/>
            <end position="383"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="389"/>
            <end position="411"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="432"/>
            <end position="452"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="464"/>
            <end position="491"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="528"/>
            <end position="550"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="866"/>
            <end position="885"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="892"/>
            <end position="914"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="920"/>
            <end position="942"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="963"/>
            <end position="984"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="996"/>
            <end position="1020"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1028"/>
            <end position="1051"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ65314.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="1051" mass="112381" checksum="B6A7BE896D5E1246" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZW38</accession>
    <name>A0A0M6ZW38_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Methionine synthase</fullName>
            <ecNumber evidence="3">2.1.1.13</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">metH_1</name>
        <name evidence="3" type="ORF">LAX5112_00986</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.1.1.13" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66487.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670896.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00986"/>
    <dbReference type="EnsemblBacteria" id="CTQ66487">
        <property type="protein sequence ID" value="CTQ66487"/>
        <property type="gene ID" value="LAX5112_00986"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031419">
        <property type="term" value="F:cobalamin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008705">
        <property type="term" value="F:methionine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1240.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003759">
        <property type="entry name" value="Cbl-bd_cap"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006158">
        <property type="entry name" value="Cobalamin-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036724">
        <property type="entry name" value="Cobalamin-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036594">
        <property type="entry name" value="Meth_synthase_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02310">
        <property type="entry name" value="B12-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02607">
        <property type="entry name" value="B12-binding_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01018">
        <property type="entry name" value="B12-binding_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47644">
        <property type="entry name" value="SSF47644"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52242">
        <property type="entry name" value="SSF52242"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51332">
        <property type="entry name" value="B12_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51337">
        <property type="entry name" value="B12_BINDING_NTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="B12-binding N-terminal" evidence="2">
        <location>
            <begin position="8"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="domain" description="B12-binding" evidence="1">
        <location>
            <begin position="102"/>
            <end position="233"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51332"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51337"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ66487.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="234" mass="25505" checksum="531B10DBE9C4A82A" modified="2015-12-09" version="1">MSDEDDIDLSALSDDELVEQMHDDLYDGLQEEILDAVNILLERGWAPYDILTKALVEGMRIVGVDFRDGILFVPEVLLSANAMKSGMSILRPLLAETGAPKVGKMVIGTVKGDIHDIGKNLVSMMMEGAGFEVIDIGINNPVENYLAALEEHQPDILGMSALLTTTMPYMKVVIDEMKEKGLRDDYIVLVGGAPLNEEFGQAVGADGYCRDAAVAVEMAKDLIARRHNQLANRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWE2</accession>
    <name>A0A0M6ZWE2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01208</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67089.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671047.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67089">
        <property type="protein sequence ID" value="CTQ67089"/>
        <property type="gene ID" value="LAX5112_01208"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="165"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="186"/>
            <end position="204"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67089.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="325" mass="30245" checksum="50B2AC55689D8A04" modified="2015-12-09" version="1">MRRYSSQDNAAADTSGGTFAISSAFGPGSNGYMRRKLFVAAGAYSWTAPQTGKVKVYAIGPGGGGGQRRPGAGGGLAEIELDINAGDVLSVTVGPGGLGTIHNVDGNNGGTTTVVCAAQGLNLVANGGEGGKAAGAAGGTATGGDVNRTGGSGGAVVSPTILGGGSSGGPRGDGFEAAAEGGSGWGGPSNNGTGASSHFPGRSSTLDETAVSGLFSKGGIAFDQTYGYSDPFGQSAVWWDLDDMDGGGGALSKSMGAEGGTGAGGGGSVSFQLGGNGGFGGGGGAAQVGGNGGNGGGGGAGGSTAGGATGGRGGDGAVIIYFNPI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWF2</accession>
    <name>A0A0M6ZWF2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01212</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67099.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671051.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01212"/>
    <dbReference type="EnsemblBacteria" id="CTQ67099">
        <property type="protein sequence ID" value="CTQ67099"/>
        <property type="gene ID" value="LAX5112_01212"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67099.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="297" mass="31921" checksum="738E799644D2ED97" modified="2015-12-09" version="1">MSEYGVTPTGFVRKPLDVILAEQEAAMRDAFGPGVIQTADSPFGQLNGVLAEFAASLWELAEDVHQSYDPNQAEGTRLVDLARIRLLEKLPGETDVHLRQAITNQNVAHIDEADFERALLAVEGVTWGKIYSNSTGETLSTGQPRNSVSVAAIGGTDEDIAAVSWQYIVPGITAFGNVAVEATISGKCRTIRIIRPTVRRVRVELDITKTPDRSGCPPPTDAEISGLLAAMTAGETRPANGVNASLELVRRTIESAYSTITVNGARFAFDEEVLADGPLVLDFYEIMSIASDDVVFA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXB1</accession>
    <name>A0A0M6ZXB1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 11">Delta-aminolevulinic acid dehydratase</fullName>
            <ecNumber evidence="4 11">4.2.1.24</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">hemB</name>
        <name evidence="13" type="ORF">LAX5112_01051</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 11">
            <text>2 5-aminolevulinate = H(+) + 2 H2O + porphobilinogen</text>
            <dbReference type="Rhea" id="RHEA:24064"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:58126"/>
            <dbReference type="ChEBI" id="CHEBI:356416"/>
            <dbReference type="EC" id="4.2.1.24"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Porphyrin-containing compound metabolism; protoporphyrin-IX biosynthesis; coproporphyrinogen-III from 5-aminolevulinate: step 1/4.</text>
    </comment>
    <comment type="subunit">
        <text evidence="11">Homooctamer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 12">Belongs to the ALAD family.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.24" evidence="4 11"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66670.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01051"/>
    <dbReference type="EnsemblBacteria" id="CTQ66670">
        <property type="protein sequence ID" value="CTQ66670"/>
        <property type="gene ID" value="LAX5112_01051"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00251">
        <property type="reaction ID" value="UER00318"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004655">
        <property type="term" value="F:porphobilinogen synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006782">
        <property type="term" value="P:protoporphyrinogen IX biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001731">
        <property type="entry name" value="ALAD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030656">
        <property type="entry name" value="ALAD_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11458">
        <property type="entry name" value="PTHR11458"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00490">
        <property type="entry name" value="ALAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001415">
        <property type="entry name" value="Porphbilin_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00144">
        <property type="entry name" value="DALDHYDRTASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM01004">
        <property type="entry name" value="ALAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00169">
        <property type="entry name" value="D_ALA_DEHYDRATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0350">Heme biosynthesis</keyword>
    <keyword evidence="7 11 13" id="KW-0456">Lyase</keyword>
    <keyword evidence="10" id="KW-0460">Magnesium</keyword>
    <keyword evidence="10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8 11" id="KW-0627">Porphyrin biosynthesis</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" description="Schiff-base intermediate with substrate" evidence="9">
        <location>
            <position position="213"/>
        </location>
    </feature>
    <feature type="active site" description="Schiff-base intermediate with substrate" evidence="9">
        <location>
            <position position="267"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="252"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001227"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008055"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012053"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00020771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023133"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR001415-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR001415-5"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU000515"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU004161"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="CTQ66670.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="345" mass="37828" checksum="DEE6E52E2FB74679" modified="2015-12-09" version="1">MPSHRSLPPITSDHMDSLLAGTRMRRNRQTDWSRRLIRENTLTVDDLIWPVFVVDGENIRQPVPSMPGIERLSVDEAVRDANLAAELGIPAIALFPYTDPDLRDDTGSEALNPDNLTCQACRAIKGEGLNLGLMTDVALDPYTSHGHDGLMHGDSILNDETVDQLCRQALNQAEAGSDVIAPSDMMDGRIGAIRQALDTQDYRSTQIMAYSAKYASAFYGPFRDAVGSSGTLKGDKRTYQMDPANTDEALREAELDIAEGADMIMVKPGMPYLDIVRRLKDEFQVPTYAYQVSGEFAMIKAASGNGWLDGDRAMMESLLAFKRAGADGILTYFAPTVAKMLAGRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXB8</accession>
    <name>A0A0M6ZXB8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Phage major tail protein, TP901-1 family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01386</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67428.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671189.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01386"/>
    <dbReference type="EnsemblBacteria" id="CTQ67428">
        <property type="protein sequence ID" value="CTQ67428"/>
        <property type="gene ID" value="LAX5112_01386"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022344">
        <property type="entry name" value="GTA_major-tail"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011855">
        <property type="entry name" value="Phgtail_TP901_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06199">
        <property type="entry name" value="Phage_tail_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01996">
        <property type="entry name" value="MTP1FAMILY"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02126">
        <property type="entry name" value="phgtail_TP901_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67428.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="137" mass="14552" checksum="AEB072C2C813002E" modified="2015-12-09" version="1">MGAQRGRDLLLKLDAASNGTFVTVAGLRARQVALNATTVDITTSDSAGRWRELLEGAGTRAASLSGSGLFRDAQSDTAVRQLFFDGAIRPWQVVVPDFGTLEGEFQITSLEYAGRHDGEVTFELALSSAGQVSFTAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXV5</accession>
    <name>A0A0M6ZXV5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">CENP-V/GFA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_00941</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the Gfa family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66364.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670865.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ66364">
        <property type="protein sequence ID" value="CTQ66364"/>
        <property type="gene ID" value="LAX5112_00941"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016846">
        <property type="term" value="F:carbon-sulfur lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006913">
        <property type="entry name" value="CENP-V/GFA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011057">
        <property type="entry name" value="Mss4-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04828">
        <property type="entry name" value="GFA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51316">
        <property type="entry name" value="SSF51316"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51891">
        <property type="entry name" value="CENP_V_GFA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CENP-V/GFA" evidence="3">
        <location>
            <begin position="9"/>
            <end position="118"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005495"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51891"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ66364.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="160" mass="17691" checksum="5DDD446799BBFA90" modified="2015-12-09" version="1">MSGEETDIKSGGCQCGAVRYCAEGFKRPSICHCRMCQKAVGGPFAALVVVENLSWTRGEPAYFQSSNLVRRGFCRDCGTPLTYEFEGSHIDITIASLDQPNLVAPEIQLGLENRLSWCEGLAVLPTRTEEAEAAAQDVFARIRNHQHPDRDTDAWPETSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZJ1</accession>
    <name>A0A0M6ZZJ1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">braC_7</name>
        <name evidence="5" type="ORF">LAX5112_01494</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the leucine-binding protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67721.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671450.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01494"/>
    <dbReference type="EnsemblBacteria" id="CTQ67721">
        <property type="protein sequence ID" value="CTQ67721"/>
        <property type="gene ID" value="LAX5112_01494"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006865">
        <property type="term" value="P:amino acid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028081">
        <property type="entry name" value="Leu-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000709">
        <property type="entry name" value="Leu_Ile_Val-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13458">
        <property type="entry name" value="Peripla_BP_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00337">
        <property type="entry name" value="LEUILEVALBP"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0029">Amino-acid transport</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809365" evidence="3">
        <location>
            <begin position="23"/>
            <end position="367"/>
        </location>
    </feature>
    <feature type="domain" description="Peripla_BP_6" evidence="4">
        <location>
            <begin position="25"/>
            <end position="362"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010062"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF13458"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ67721.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="367" mass="39164" checksum="D913BBC92457482E" modified="2015-12-09" version="1">MKIIRGLAGMMAATLFSWPLSAAAEIHIAVAGPMKGQFEDLGQQIRAGAEQAVVDINMAGGVLGEPLVLDIVDDGCDETQAKAVANQLIGREVSMVVGHVCFSASIPASKIYSKAGIVQISPATTLPKFTDERPGPGIYRLAPRDDEQARVLGQYLADAFAGQDIALLHDKTAYGKGLTDAVRVVLNQNGVTETLYEGFDAGLNDYRILVSRLALEGADVVFIGGYHPEAGLIKLEMQRLGVEAVLVGGDTLMPQSFWDVAGEAGEETTFTYPLDPRSFESASTVIEALESREEIAERYALAAYAAVEAWAEAVEAAGAPDFAAVTKVMDEQAFPTILGDISFDDKGDSSVAQFVIYEWKSGKPVQR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZN0</accession>
    <name>A0A0M6ZZN0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">His-Xaa-Ser repeat protein HxsA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01509</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67761.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01509"/>
    <dbReference type="EnsemblBacteria" id="CTQ67761">
        <property type="protein sequence ID" value="CTQ67761"/>
        <property type="gene ID" value="LAX5112_01509"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.101.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002477">
        <property type="entry name" value="Peptidoglycan-bd-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036365">
        <property type="entry name" value="PGBD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036366">
        <property type="entry name" value="PGBDSf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01471">
        <property type="entry name" value="PG_binding_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47090">
        <property type="entry name" value="SSF47090"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PG_binding_1" evidence="2">
        <location>
            <begin position="75"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="domain" description="PG_binding_1" evidence="2">
        <location>
            <begin position="168"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="137"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="149"/>
            <end position="163"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ67761.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="233" mass="24624" checksum="3094C1468C871293" modified="2015-12-09" version="1">MMSRAGNVARDNPVAAGGTVVMGLTACLIVANALGLQPGRHPAPYYTTRDWPDTAPEPLAEADGGVTVQEISTLVLDLQISLRKADLYEGPLDGINGPATERAIRAFERKAGRVETGEASESLLALIWLHGTDPAALTAPPVPRAKPATSGTPRQNTQEEAATGVDSDPRLKKIQYALSELGYGPLTVDGLMGTNTAAALKRFELDRGLPITGEANPQTLERLEMVSGQRFDG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A053</accession>
    <name>A0A0M7A053_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 8">30S ribosomal protein S3</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8 13" type="primary">rpsC</name>
        <name evidence="13" type="ORF">LAX5112_01732</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7 8">Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation.</text>
    </comment>
    <comment type="subunit">
        <text evidence="8">Part of the 30S ribosomal subunit. Forms a tight complex with proteins S10 and S14.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 8 10">Belongs to the universal ribosomal protein uS3 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68418.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040450745.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01732"/>
    <dbReference type="EnsemblBacteria" id="CTQ68418">
        <property type="protein sequence ID" value="CTQ68418"/>
        <property type="gene ID" value="LAX5112_01732"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003729">
        <property type="term" value="F:mRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1140.32">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01309_B">
        <property type="entry name" value="Ribosomal_S3_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004087">
        <property type="entry name" value="KH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015946">
        <property type="entry name" value="KH_dom-like_a/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004044">
        <property type="entry name" value="KH_dom_type_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009019">
        <property type="entry name" value="KH_sf_prok-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005704">
        <property type="entry name" value="Ribosomal_S3_bac-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001351">
        <property type="entry name" value="Ribosomal_S3_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036419">
        <property type="entry name" value="Ribosomal_S3_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018280">
        <property type="entry name" value="Ribosomal_S3_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07650">
        <property type="entry name" value="KH_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00189">
        <property type="entry name" value="Ribosomal_S3_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00322">
        <property type="entry name" value="KH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54814">
        <property type="entry name" value="SSF54814"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54821">
        <property type="entry name" value="SSF54821"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01009">
        <property type="entry name" value="rpsC_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50823">
        <property type="entry name" value="KH_TYPE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00548">
        <property type="entry name" value="RIBOSOMAL_S3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 8 10" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="5 8 10" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="4 8 9" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="3 8" id="KW-0699">rRNA-binding</keyword>
    <feature type="domain" description="KH type-2" evidence="12">
        <location>
            <begin position="39"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="214"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="11">
        <location>
            <begin position="228"/>
            <end position="242"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010761"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00016776"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00024998"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01309"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00118"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU003624"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50823"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="CTQ68418.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="242" mass="27223" checksum="B32E33251182B36A" modified="2015-12-09" version="1">MGHKVNPIGMRLGINRTWDSRWYANKNEYGDLLHEDFRIREYLMKELKQAAVSKVVIERPHKKCRVSIHSGRPGVVIGKKGADIERLRKKIAEITNSEVHLNIVEVRKPEIDATLVAASIAQQLERRVAFRRAMKRAVQSAMRLGAQGIRINCGGRLGGAEIARIEWYREGRVPLHTLRADIDYGVASAHTAYGVCGVKVWIFKGEILEHDPMASERRATAASEGNQGDRGGRRDRGRERAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0I3</accession>
    <name>A0A0M7A0I3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01760</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68495.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ68495">
        <property type="protein sequence ID" value="CTQ68495"/>
        <property type="gene ID" value="LAX5112_01760"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="32"/>
            <end position="53"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68495.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="56" mass="5915" checksum="4F747D6BF9ACA5A6" modified="2015-12-09" version="1">MTKIIALFLILVAAIQVIKPLGWPGLKKRSDAWKLAAGVVAVTIGSVILTALFQGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0T0</accession>
    <name>A0A0M7A0T0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 6">Superoxide dismutase</fullName>
            <ecNumber evidence="2 6">1.15.1.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">sodB</name>
        <name evidence="9" type="ORF">LAX5112_01540</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Destroys radicals which are normally produced within the cells and which are toxic to biological systems.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>2 H(+) + 2 superoxide = H2O2 + O2</text>
            <dbReference type="Rhea" id="RHEA:20696"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:16240"/>
            <dbReference type="ChEBI" id="CHEBI:18421"/>
            <dbReference type="EC" id="1.15.1.1"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the iron/manganese superoxide dismutase family.</text>
    </comment>
    <dbReference type="EC" id="1.15.1.1" evidence="2 6"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67840.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008192782.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01540"/>
    <dbReference type="EnsemblBacteria" id="CTQ67840">
        <property type="protein sequence ID" value="CTQ67840"/>
        <property type="gene ID" value="LAX5112_01540"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004784">
        <property type="term" value="F:superoxide dismutase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.990">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.55.40.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001189">
        <property type="entry name" value="Mn/Fe_SOD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019833">
        <property type="entry name" value="Mn/Fe_SOD_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019832">
        <property type="entry name" value="Mn/Fe_SOD_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019831">
        <property type="entry name" value="Mn/Fe_SOD_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036324">
        <property type="entry name" value="Mn/Fe_SOD_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036314">
        <property type="entry name" value="SOD_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02777">
        <property type="entry name" value="Sod_Fe_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00081">
        <property type="entry name" value="Sod_Fe_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000349">
        <property type="entry name" value="SODismutase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01703">
        <property type="entry name" value="MNSODISMTASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46609">
        <property type="entry name" value="SSF46609"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54719">
        <property type="entry name" value="SSF54719"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00088">
        <property type="entry name" value="SOD_MN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5 6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4 6 9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Sod_Fe_N" evidence="7">
        <location>
            <begin position="2"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="domain" description="Sod_Fe_C" evidence="8">
        <location>
            <begin position="95"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="27"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="77"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="160"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="164"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008714"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012682"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR000349-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU000414"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00081"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF02777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ67840.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="200" mass="22327" checksum="1DE5C4F104A10E5E" modified="2015-12-09" version="1">MSFELPDLPYAYDALAPYMSAETLEFHHDKHHQAYVTKGNELLAGSGLEGKSLEDVVKESFGKNAPLFNNAGQHYNHIHFWKWMKKDGGGTSLPGALASAIDSDLGGYDKFRADFIAAGVGQFGSGWAWLAVKDGKLEIMKTPNGENPLVHGASPILGCDVWEHSYYIDYRNARPKYLEAFIDNMINWDYVLEMYEAATK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1K8</accession>
    <name>A0A0M7A1K8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Molybdopterin-guanine dinucleotide biosynthesis protein B</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">mobB</name>
        <name evidence="2" type="ORF">LAX5112_01949</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68958.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008188764.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01949"/>
    <dbReference type="EnsemblBacteria" id="CTQ68958">
        <property type="protein sequence ID" value="CTQ68958"/>
        <property type="gene ID" value="LAX5112_01949"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006777">
        <property type="term" value="P:Mo-molybdopterin cofactor biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004435">
        <property type="entry name" value="MobB_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03205">
        <property type="entry name" value="MobB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00176">
        <property type="entry name" value="mobB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MobB" evidence="1">
        <location>
            <begin position="6"/>
            <end position="139"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03205"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68958.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="173" mass="19074" checksum="82DBB25F9FD4494E" modified="2015-12-09" version="1">MISTPVFGITGWKNSGKTQLVTRLVAEFTSRGLKVSTVKHAHHNFDIDRPGADSYRHREAGAVEVALVSGRRWALMHELREEEEPPLSAILPRLAPCDLILIEGYKRENHPKIEARRTESASKGPLSPDDPHILAVAADHAIPDETLPVYDLDDVSGLADFITSHLSLQSVQS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2E8</accession>
    <name>A0A0M7A2E8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01809</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68616.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008191887.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ68616">
        <property type="protein sequence ID" value="CTQ68616"/>
        <property type="gene ID" value="LAX5112_01809"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809086" evidence="1">
        <location>
            <begin position="25"/>
            <end position="168"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68616.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="168" mass="17764" checksum="3AB651D00D657B3E" modified="2015-12-09" version="1">MPLKKTLITATLATAALGIGSAHALEQCQPFSVTAPMNEHRVVKVVKQGSDAPMPGDLRIGHSDLVDNNGNAVGSVEWETRVLGEDDAGQVRLASDVVLSFENGNLYARSGAYTVDKPVHSPETRTIGNEQTRDVLGGSGVFEDANGQITFSMQENGDAQLNVNIACT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2R0</accession>
    <name>A0A0M7A2R0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Quercetin 2,3-dioxygenase</fullName>
            <ecNumber evidence="5">1.13.11.24</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">yhhW_2</name>
        <name evidence="5" type="ORF">LAX5112_01604</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the pirin family.</text>
    </comment>
    <dbReference type="EC" id="1.13.11.24" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68013.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671458.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ68013">
        <property type="protein sequence ID" value="CTQ68013"/>
        <property type="gene ID" value="LAX5112_01604"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008127">
        <property type="term" value="F:quercetin 2,3-dioxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012093">
        <property type="entry name" value="Pirin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008778">
        <property type="entry name" value="Pirin_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003829">
        <property type="entry name" value="Pirin_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13903">
        <property type="entry name" value="PTHR13903"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02678">
        <property type="entry name" value="Pirin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05726">
        <property type="entry name" value="Pirin_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006232">
        <property type="entry name" value="Pirin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0223">Dioxygenase</keyword>
    <keyword evidence="5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Pirin" evidence="3">
        <location>
            <begin position="21"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="domain" description="Pirin_C" evidence="4">
        <location>
            <begin position="177"/>
            <end position="299"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008416"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU003457"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF02678"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF05726"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ68013.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="300" mass="33180" checksum="8EE8AAC4F3BDAFA4" modified="2015-12-09" version="1">MSVRPVTHIGSTQSTLEGAGVKLERVFGFQDPEMLDPFLMMDDFRNNRPEDYLAGFPWHPHRGIETITYVLKGTVEHGDSLGNTGTLGAGSVQWMTAGRGIMHQEMPKGDETGKMHGFQLWANLPSSLKMTEPRYQDIEGKNIPVVVDDDGTSARVIIGEFWGKKGPVDGIAADPQYLDIHVPAGRKKRFKVDTYKQTFAYIFEGSGKFEGASDPFGVLTEKEFGGEELKIRDQTGDRTLVIFGTGDEIVVHAGENGIRFLLVSGAPIKEPVAWHGPIVMNTRKELMQAITELQNGTFIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A397</accession>
    <name>A0A0M7A397_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Putative Fe-S protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01923</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68886.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671615.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ68886">
        <property type="protein sequence ID" value="CTQ68886"/>
        <property type="gene ID" value="LAX5112_01923"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010710">
        <property type="entry name" value="DUF1289"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35175">
        <property type="entry name" value="PTHR35175"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06945">
        <property type="entry name" value="DUF1289"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ68886.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="64" mass="7194" checksum="C6F87B9E13079843" modified="2015-12-09" version="1">MGTMKSPCIKICQIDQVSRLCTGCFRTLDEIASWSSFDDTQRQAIMNSLDTRRMRFSAGEAALT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3U6</accession>
    <name>A0A0M7A3U6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">LIV-I protein F</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">livF_8</name>
        <name evidence="6" type="ORF">LAX5112_02156</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69549.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671809.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02156"/>
    <dbReference type="EnsemblBacteria" id="CTQ69549">
        <property type="protein sequence ID" value="CTQ69549"/>
        <property type="gene ID" value="LAX5112_02156"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="4"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="36"/>
            <end position="43"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ69549.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="235" mass="25247" checksum="FC633056AADE59B7" modified="2015-12-09" version="1">MALLQTQNLTAHYGDFQALFGVDIRLEEGETVAIIGANGAGKTTLMRSISGVLKNQTEAITFDADKIGATHAADVLQKGIAMVPEGRKLFPSLSVEENLLIGAYGRKGNGPWTLETIYRMFPVLQERRNNPGTALSGGQQQMVAIGRALMSNPRVLLCDEISLGLAPVIIKDIYAALPKIKETGTSIIVVEQDIGQALKVADRVYCMMEGRITLEGSPSDLSRDAIHNAYFGASA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4C6</accession>
    <name>A0A0M7A4C6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02057</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69286.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ69286">
        <property type="protein sequence ID" value="CTQ69286"/>
        <property type="gene ID" value="LAX5112_02057"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="16"/>
            <end position="30"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69286.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="110" mass="12256" checksum="5E2248B368079246" modified="2015-12-09" version="1">MRVNPVTSTGRANVRRKRPSVGETESERRPAFSSHVPVPLEPVLERKQDAFAGRYRPNSIFLAHLIATRDGELQARSGRQTEPLTGVNTYRATAALPRQRGAGHVLKTER</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4M3</accession>
    <name>A0A0M7A4M3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Outer membrane porin F</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">oprF</name>
        <name evidence="5" type="ORF">LAX5112_02091</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69376.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008189386.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02091"/>
    <dbReference type="EnsemblBacteria" id="CTQ69376">
        <property type="protein sequence ID" value="CTQ69376"/>
        <property type="gene ID" value="LAX5112_02091"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07185">
        <property type="entry name" value="OmpA_C-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006664">
        <property type="entry name" value="OMP_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006665">
        <property type="entry name" value="OmpA-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036737">
        <property type="entry name" value="OmpA-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00691">
        <property type="entry name" value="OmpA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01021">
        <property type="entry name" value="OMPADOMAIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103088">
        <property type="entry name" value="SSF103088"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51123">
        <property type="entry name" value="OMPA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 2" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809127" evidence="3">
        <location>
            <begin position="24"/>
            <end position="193"/>
        </location>
    </feature>
    <feature type="domain" description="OmpA-like" evidence="4">
        <location>
            <begin position="75"/>
            <end position="193"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00473"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ69376.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="193" mass="21295" checksum="4F347F2D015853C6" modified="2015-12-09" version="1">MKNLFFASAAACALCFSTTLASAQTELSRNQIINSLQGAQEKVEVSADALQRAALENIQKYPGADSPQTIPMYQQLASLRQFNIEITFDFDSARIRPESYEAVGLIADALHTPYLQGQTFFIVGHTDAKGDRTYNLELSQRRAQAIREALVTTFQVPGSTLFSVGLGEEQLRDPADPFAAVNRRVQLINMGYN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A554</accession>
    <name>A0A0M7A554_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="11 12">ATP synthase subunit a</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="11">ATP synthase F0 sector subunit a</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="11">F-ATPase subunit 6</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11 13" type="primary">atpB</name>
        <name evidence="13" type="ORF">LAX5112_02410</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11 12">Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="11 12">Cell membrane</location>
            <topology evidence="11 12">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 11 12">Belongs to the ATPase A chain family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70208.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672023.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02410"/>
    <dbReference type="EnsemblBacteria" id="CTQ70208">
        <property type="protein sequence ID" value="CTQ70208"/>
        <property type="gene ID" value="LAX5112_02410"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045263">
        <property type="term" value="C:proton-transporting ATP synthase complex, coupling factor F(o)"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046933">
        <property type="term" value="F:proton-transporting ATP synthase activity, rotational mechanism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.220">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01393">
        <property type="entry name" value="ATP_synth_a_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000568">
        <property type="entry name" value="ATP_synth_F0_asu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023011">
        <property type="entry name" value="ATP_synth_F0_asu_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045083">
        <property type="entry name" value="ATP_synth_F0_asu_bact/mt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035908">
        <property type="entry name" value="F0_ATP_A_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11410">
        <property type="entry name" value="PTHR11410"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00119">
        <property type="entry name" value="ATP-synt_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00123">
        <property type="entry name" value="ATPASEA"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81336">
        <property type="entry name" value="SSF81336"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01131">
        <property type="entry name" value="ATP_synt_6_or_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00449">
        <property type="entry name" value="ATPASE_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10 11" id="KW-0066">ATP synthesis</keyword>
    <keyword evidence="11" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 11 12" id="KW-0138">CF(0)</keyword>
    <keyword evidence="6 11 12" id="KW-0375">Hydrogen ion transport</keyword>
    <keyword evidence="8 11 12" id="KW-0406">Ion transport</keyword>
    <keyword evidence="9 11" id="KW-0472">Membrane</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 11 12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 11" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3 11 12" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="31"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="84"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="114"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="140"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="189"/>
            <end position="210"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="216"/>
            <end position="241"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006810"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022547"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022781"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023310"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01393"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU000483"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="CTQ70208.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="249" mass="26930" checksum="3F9B4668AB789BE6" modified="2015-12-09" version="1">MANDPISQFKIQTLFPIEVGGMDFSFTNSSLFMVATVAAASAFLILSTSGRGLVPSRVQSVSEMAYEFVAGMLRSSAGTEGMRFFPLVFSLFMFVLVANLFGMFPYFFTVTSHIIVTFALAMLVFLTVTIYGIMKHGTKFFHLFAPSGVPPVLLLIVAPIEVVSFLSRPISLSVRLFANMLAGHITLKVFAGFIVSMSAAGSVGIVGAILPLSMTVAITALEFLVSFLQAYVFTVLTCMYLNDALHPSH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5D4</accession>
    <name>A0A0M7A5D4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Thiamine-phosphate synthase</fullName>
            <ecNumber evidence="8">2.5.1.3</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">Thiamine-phosphate pyrophosphorylase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="primary">thiE</name>
        <name evidence="11" type="ORF">LAX5112_01903</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 8">
            <text>2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate + 4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine + 2 H(+) = CO2 + diphosphate + thiamine phosphate</text>
            <dbReference type="Rhea" id="RHEA:47848"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:37575"/>
            <dbReference type="ChEBI" id="CHEBI:57841"/>
            <dbReference type="ChEBI" id="CHEBI:62890"/>
            <dbReference type="EC" id="2.5.1.3"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3 8">
            <text>2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate + 4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine + 2 H(+) = CO2 + diphosphate + thiamine phosphate</text>
            <dbReference type="Rhea" id="RHEA:47844"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:37575"/>
            <dbReference type="ChEBI" id="CHEBI:57841"/>
            <dbReference type="ChEBI" id="CHEBI:62899"/>
            <dbReference type="EC" id="2.5.1.3"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2 8">
            <text>4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine + 4-methyl-5-(2-phosphooxyethyl)-thiazole + H(+) = diphosphate + thiamine phosphate</text>
            <dbReference type="Rhea" id="RHEA:22328"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:37575"/>
            <dbReference type="ChEBI" id="CHEBI:57841"/>
            <dbReference type="ChEBI" id="CHEBI:58296"/>
            <dbReference type="EC" id="2.5.1.3"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="4 9">Cofactor biosynthesis; thiamine diphosphate biosynthesis; thiamine phosphate from 4-amino-2-methyl-5-diphosphomethylpyrimidine and 4-methyl-5-(2-phosphoethyl)-thiazole: step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the thiamine-phosphate synthase family.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.3" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68834.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671597.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01903"/>
    <dbReference type="EnsemblBacteria" id="CTQ68834">
        <property type="protein sequence ID" value="CTQ68834"/>
        <property type="gene ID" value="LAX5112_01903"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00060">
        <property type="reaction ID" value="UER00141"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004789">
        <property type="term" value="F:thiamine-phosphate diphosphorylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009228">
        <property type="term" value="P:thiamine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009229">
        <property type="term" value="P:thiamine diphosphate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd00564">
        <property type="entry name" value="TMP_TenI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036206">
        <property type="entry name" value="ThiamineP_synth_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022998">
        <property type="entry name" value="ThiamineP_synth_TenI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034291">
        <property type="entry name" value="TMP_synthase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02581">
        <property type="entry name" value="TMP-TENI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51391">
        <property type="entry name" value="SSF51391"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00693">
        <property type="entry name" value="thiE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0460">Magnesium</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 8" id="KW-0784">Thiamine biosynthesis</keyword>
    <keyword evidence="5 8 11" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="TMP-TENI" evidence="10">
        <location>
            <begin position="12"/>
            <end position="180"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000876"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001159"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00001829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00005165"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU003826"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU004253"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF02581"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ68834.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="201" mass="22131" checksum="A7DE7E5031F0F143" modified="2015-12-09" version="1">MKLDPFYLIVDSTDWIARLVPIGVKLVQLRIKDQPVADIARQIREAKSVCADHGCQLVVNDHWRLAISEGCDFIHLGQEDLADADVDTIRNAGLKLGVSTHDGAELSTALAVQPEYVALGPVYPTVTKELKWAPQGLEKITRWKADIGDLPLVTIGGLTVERLSGVFEHGADSAAVVTDITRNSDPEARTREWISATQKWR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A654</accession>
    <name>A0A0M7A654_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Glucosyl-3-phosphoglycerate phosphatase</fullName>
            <ecNumber evidence="1">3.1.3.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">gpgP</name>
        <name evidence="1" type="ORF">LAX5112_02484</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.3.-" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70369.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672071.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02484"/>
    <dbReference type="EnsemblBacteria" id="CTQ70369">
        <property type="protein sequence ID" value="CTQ70369"/>
        <property type="gene ID" value="LAX5112_02484"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd07067">
        <property type="entry name" value="HP_PGM_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1240">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013078">
        <property type="entry name" value="His_Pase_superF_clade-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029033">
        <property type="entry name" value="His_PPase_superfam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00300">
        <property type="entry name" value="His_Phos_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00855">
        <property type="entry name" value="PGAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53254">
        <property type="entry name" value="SSF53254"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ70369.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="217" mass="24476" checksum="30670338E0E0C11B" modified="2015-12-09" version="1">MTIVPAPQSPEYLKKLFDPGFLIFIRHGQTDWNAEGRMQGQKDIPLNAHGEGQATNNGALLKAFLEQEGIVPVSLDFVASPLGRTRATMERVRTEMGLAPDTYRLDDQLKEITFGDWEGFTLEELAVNDPELVEQRRADKWRFVPPGGESYEMLADRIGRWLVTVDRPSVVVSHGGVFRVLRGLLEGGYTDKVPKYDVPQDKVFIWRDSQMTAVETV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6R8</accession>
    <name>A0A0M7A6R8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Glutathione-dependent peroxiredoxin</fullName>
            <ecNumber evidence="3">1.11.1.27</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">LAX5112_02365</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>a hydroperoxide + 2 glutathione = an alcohol + glutathione disulfide + H2O</text>
            <dbReference type="Rhea" id="RHEA:62632"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:30879"/>
            <dbReference type="ChEBI" id="CHEBI:35924"/>
            <dbReference type="ChEBI" id="CHEBI:57925"/>
            <dbReference type="ChEBI" id="CHEBI:58297"/>
            <dbReference type="EC" id="1.11.1.27"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the peroxiredoxin family. Prx5 subfamily.</text>
    </comment>
    <dbReference type="EC" id="1.11.1.27" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70116.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671984.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02365"/>
    <dbReference type="EnsemblBacteria" id="CTQ70116">
        <property type="protein sequence ID" value="CTQ70116"/>
        <property type="gene ID" value="LAX5112_02365"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004601">
        <property type="term" value="F:peroxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd03013">
        <property type="entry name" value="PRX5_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037944">
        <property type="entry name" value="PRX5-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013740">
        <property type="entry name" value="Redoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013766">
        <property type="entry name" value="Thioredoxin_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10430">
        <property type="entry name" value="PTHR10430"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08534">
        <property type="entry name" value="Redoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51352">
        <property type="entry name" value="THIOREDOXIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0049">Antioxidant</keyword>
    <keyword evidence="2 3 5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="1 3 5" id="KW-0575">Peroxidase</keyword>
    <keyword evidence="3" id="KW-0676">Redox-active center</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Thioredoxin" evidence="4">
        <location>
            <begin position="3"/>
            <end position="160"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU366011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ70116.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="160" mass="16549" checksum="457D198CE535DBB1" modified="2015-12-09" version="1">MTLKVGDKLPDATFKTMTSDGPGELSTADLTSGKTVVLFGVPGAFTPTCHMNHLPGFVEHAETLKSKGVDEIAVVSVNDVFVMDAWQKASNANAITFLADTGADFVEAAGLGLGPAPIFGHLRSQRFALIAKDGEVSFIAVEDSPGDATKTGAAAILEAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A767</accession>
    <name>A0A0M7A767_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative HTH-type transcriptional regulator YfiR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yfiR</name>
        <name evidence="3" type="ORF">LAX5112_02439</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70266.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672041.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70266">
        <property type="protein sequence ID" value="CTQ70266"/>
        <property type="gene ID" value="LAX5112_02439"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023772">
        <property type="entry name" value="DNA-bd_HTH_TetR-type_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036271">
        <property type="entry name" value="Tet_transcr_reg_TetR-rel_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00440">
        <property type="entry name" value="TetR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00455">
        <property type="entry name" value="HTHTETR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48498">
        <property type="entry name" value="SSF48498"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01081">
        <property type="entry name" value="HTH_TETR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50977">
        <property type="entry name" value="HTH_TETR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH tetR-type" evidence="2">
        <location>
            <begin position="9"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="1">
        <location>
            <begin position="32"/>
            <end position="51"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ70266.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="198" mass="21918" checksum="9AAF2FBEB1F4E444" modified="2015-12-09" version="1">MPYSAEHKDKTRKKIVETARVLFNRHGFNGVSIDMVMQEAGLTRGGFYNHFKNKEELFSEAVMSFLMGRGAEWREDAGVDVTNLRPEMAHQMINAYLSPEHLNDLDGQCPMIALPSDIARGGIEAQQSFQTLLEAMVSLFETNMSSDDSTNRQWAQAIAALCVGGMVLSRALPDSTLAKEVRVAAGHSAKRLLSEGQR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7E7</accession>
    <name>A0A0M7A7E7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Putative prophage CPS-53 integrase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">intS_2</name>
        <name evidence="9" type="ORF">LAX5112_02198</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69653.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671838.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02198"/>
    <dbReference type="EnsemblBacteria" id="CTQ69653">
        <property type="protein sequence ID" value="CTQ69653"/>
        <property type="gene ID" value="LAX5112_02198"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0075713">
        <property type="term" value="P:establishment of integrated proviral latency"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046718">
        <property type="term" value="P:viral entry into host cell"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044826">
        <property type="term" value="P:viral genome integration into host DNA"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.130">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.443.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.390">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044068">
        <property type="entry name" value="CB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011010">
        <property type="entry name" value="DNA_brk_join_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013762">
        <property type="entry name" value="Integrase-like_cat_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002104">
        <property type="entry name" value="Integrase_catalytic"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038488">
        <property type="entry name" value="Integrase_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025166">
        <property type="entry name" value="Integrase_DNA_bind_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010998">
        <property type="entry name" value="Integrase_recombinase_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13356">
        <property type="entry name" value="Arm-DNA-bind_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00589">
        <property type="entry name" value="Phage_integrase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56349">
        <property type="entry name" value="SSF56349"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51900">
        <property type="entry name" value="CB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51898">
        <property type="entry name" value="TYR_RECOMBINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0229">DNA integration</keyword>
    <keyword evidence="3" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="2 6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-1179">Viral genome integration</keyword>
    <keyword evidence="5" id="KW-1160">Virus entry into host cell</keyword>
    <feature type="domain" description="Core-binding (CB)" evidence="8">
        <location>
            <begin position="95"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="domain" description="Tyr recombinase" evidence="7">
        <location>
            <begin position="200"/>
            <end position="377"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022908"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023195"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023296"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01248"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ69653.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="395" mass="45478" checksum="C16F842F159E7F53" modified="2015-12-09" version="1">MLTDTAIRKAQTREKPYKMADKNGLYILVKPNGSKLFRYDYKVHGRRRTQSFGQYPKTTLKMAREQHQTSWDLVAKGLDPMASKLKAGDPDFETDTFGALVADYIANLKAEKRAEATLNKNRWLLQDLAKTLHDKPVRSIKASDILPVIQSVERQGKIESAQRLRGIIGSVFRFGVARGRADDDPAQALRGAIRTKKVRHHPAIVEEKQLGRLLRSIWAYEGSATIAAALKISAYCYARPVETRYCRWDHLDLQEAIWTVPADLKKMRVVHDIPLCKQAVQVFREMHEIRQSDFVFYQLRKPDRPISENAMNSALANMGYKDIHTSHGFRASAGSILTKHKYADKVIELSLSHLEKDETRRAYRRYEFWDERVEMAQGWADLCDNLRSRKLHELI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7Q8</accession>
    <name>A0A0M7A7Q8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02441</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70270.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672043.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02441"/>
    <dbReference type="EnsemblBacteria" id="CTQ70270">
        <property type="protein sequence ID" value="CTQ70270"/>
        <property type="gene ID" value="LAX5112_02441"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032809">
        <property type="entry name" value="Put_HupE_UreJ"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13795">
        <property type="entry name" value="HupE_UreJ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809316" evidence="2">
        <location>
            <begin position="29"/>
            <end position="243"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="109"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="150"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="180"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="218"/>
            <end position="240"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ70270.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="243" mass="26650" checksum="00F124C5D6E5CEB5" modified="2015-12-09" version="1">MKPYSIKGRTRLSHAFVVALSLSFLFYAAGVQSAAAHDVTPGDAGYIQEIWGVHIIPFIYLGAKHMVTGYDHILFLLGVVFFLYRMKDVAIYVSLFALGHSVTMLLGVWYGWGINAYIIDAIIGLSVVYKALDNLGAFQKVLGFQPNTKAATLIFGLFHGTGLASKILEYNISSDGLLANLLAFNVGVEIGQLLALFVILIVMGYWRKSPHFMRQATIANIIMVFLGVLLTYQQIAGYIASTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7S9</accession>
    <name>A0A0M7A7S9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Universal stress protein G</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">uspG_1</name>
        <name evidence="3" type="ORF">LAX5112_02734</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the universal stress protein A family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71148.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672283.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ71148">
        <property type="protein sequence ID" value="CTQ71148"/>
        <property type="gene ID" value="LAX5112_02734"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006015">
        <property type="entry name" value="Universal_stress_UspA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006016">
        <property type="entry name" value="UspA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00582">
        <property type="entry name" value="Usp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01438">
        <property type="entry name" value="UNVRSLSTRESS"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Usp" evidence="2">
        <location>
            <begin position="1"/>
            <end position="140"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008791"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00582"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ71148.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="142" mass="15316" checksum="89EB3847E1709DEE" modified="2015-12-09" version="1">MFKKILVPIDPAEPQFADDALAKAAQMARDYGAKIHLLGVCPEVQSFVASQLPEGFQENELRETAGILQKTGDALDVPEGAVDVMVRVGSVYHEVIEEAEKAECDLVLMTSHKPGLSTYFIGSNAAHIVRHAPCSVLVLRGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7V1</accession>
    <name>A0A0M7A7V1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Alkaline phosphatase</fullName>
            <ecNumber evidence="5">3.1.3.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">phoK_1</name>
        <name evidence="5" type="ORF">LAX5112_02750</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.3.1" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71235.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672310.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02750"/>
    <dbReference type="EnsemblBacteria" id="CTQ71235">
        <property type="protein sequence ID" value="CTQ71235"/>
        <property type="gene ID" value="LAX5112_02750"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004035">
        <property type="term" value="F:alkaline phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd16016">
        <property type="entry name" value="AP-SPAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017850">
        <property type="entry name" value="Alkaline_phosphatase_core_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026263">
        <property type="entry name" value="Alkaline_phosphatase_prok"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002591">
        <property type="entry name" value="Phosphodiest/P_Trfase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01663">
        <property type="entry name" value="Phosphodiest"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF031924">
        <property type="entry name" value="Pi-irrepressible_AP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53649">
        <property type="entry name" value="SSF53649"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809506" evidence="4">
        <location>
            <begin position="25"/>
            <end position="564"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="124"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="2">
        <location>
            <begin position="174"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="active site" description="Phosphothreonine intermediate" evidence="1">
        <location>
            <position position="78"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="99"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRSR" id="PIRSR031924-50"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR031924-51"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ71235.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="564" mass="61567" checksum="B015A9E37D8BE740" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8D4</accession>
    <name>A0A0M7A8D4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">YHS domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02636</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70871.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672304.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70871">
        <property type="protein sequence ID" value="CTQ70871"/>
        <property type="gene ID" value="LAX5112_02636"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809327" evidence="1">
        <location>
            <begin position="26"/>
            <end position="163"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70871.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="163" mass="18009" checksum="092C1503A0E6ACC9" modified="2015-12-09" version="1">MPLYTSKSVLLGLTALFSVTGFAVSADEITTFTKNGAAIGGTDPVAYFTQGKPIAGSDEYTFQYDDVTWKFSSAENRDKFAADPVKYAPQYGGFCAFGLSKGFKVPVIPEAWKIVDGKLYLNNSIAVQDRFEGNTEEYINHADLNWDIVKDTKPEDLKEPIIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8L6</accession>
    <name>A0A0M7A8L6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Methyltransferase, FkbM family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02839</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71485.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672367.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02839"/>
    <dbReference type="EnsemblBacteria" id="CTQ71485">
        <property type="protein sequence ID" value="CTQ71485"/>
        <property type="gene ID" value="LAX5112_02839"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006342">
        <property type="entry name" value="FkbM_mtfrase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05050">
        <property type="entry name" value="Methyltransf_21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01444">
        <property type="entry name" value="fkbM_fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Methyltransf_21" evidence="1">
        <location>
            <begin position="101"/>
            <end position="262"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF05050"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71485.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="296" mass="32807" checksum="934A88345328C69E" modified="2015-12-09" version="1">MVAILDTSSPFGTYRAGWLAKAAWRAADAHRLPDWLRYKIRHFVADRFPGPYDTSAEGLTFRIYPGVNRDDWKIVAKDRLSEKAERKMLAQHFNKDAVFVDLGANIGTHTLSAAELCGRVIAVEANPDIAAKLAYNVELNKLDNVSVMSVAAGPEEGTFDLVICPSNLNLSTLSEGLAPSLKKSEWTTTSIRVSPLAVILQDAGVEQVDVLKLDVEGYEDQAILPYFRTQPRHKWPRVVMIEVDHQPEWKEDCLAEMTAIGYREIGTTGANIMLELTEVPDENDQAPASGIKELAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8R2</accession>
    <name>A0A0M7A8R2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">phoR_2</name>
        <name evidence="9" type="ORF">LAX5112_02844</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71498.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672369.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02844"/>
    <dbReference type="EnsemblBacteria" id="CTQ71498">
        <property type="protein sequence ID" value="CTQ71498"/>
        <property type="gene ID" value="LAX5112_02844"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0418">Kinase</keyword>
    <keyword evidence="6" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 9" id="KW-0808">Transferase</keyword>
    <keyword evidence="6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="30"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="154"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="8">
        <location>
            <begin position="175"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="7">
        <location>
            <begin position="236"/>
            <end position="435"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ71498.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="435" mass="46464" checksum="CA43526FD704451A" modified="2015-12-09" version="1">MSSASKLLGKISAALAHRVRWLLRSSTLRLSLLLTAIFAVGMAVAILLALTFGREAVLNRVDTALEGLAATVEADDTEADTFSVIIRPLSEIGDLPKEFEKVVRTGGGTVSLKRDFRRAEDWRVLISRDKEGEPVLIAVPLDATEDALELLGNALWSTAGVVLVLVLVIGLAAGFLVQRRLARITGVLDRLATGDLEARIGVARSSDDLDDLAGRIDRTAQELERLVAQTRYLSASIAHDLRTPLARLRAQLESLPDGEERGAALEEAERLSGIFDTIMRVARIEAAHGTEGFEHVDLSALIDEVAEIYGPVVEDAGKSLVLSAKSGATVLADRSMLIQALANLIQNALVHGGPDITLFASGSQIGVSDNGPGVDPDLFDEIIKPMVRLDAARESEGTGLGLALVRAVADRHTAELELSSNKPSGLRVALNFTKM</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8S9</accession>
    <name>A0A0M7A8S9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Glycine cleavage system H protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3 6" type="primary">gcvH</name>
        <name evidence="6" type="ORF">LAX5112_02378</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="3">
            <name>(R)-lipoate</name>
            <dbReference type="ChEBI" id="CHEBI:83088"/>
        </cofactor>
        <text evidence="3">Binds 1 lipoyl cofactor covalently.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">The glycine cleavage system is composed of four proteins: P, T, L and H.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the GcvH family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70143.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008195890.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02378"/>
    <dbReference type="EnsemblBacteria" id="CTQ70143">
        <property type="protein sequence ID" value="CTQ70143"/>
        <property type="gene ID" value="LAX5112_02378"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005960">
        <property type="term" value="C:glycine cleavage complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019464">
        <property type="term" value="P:glycine decarboxylation via glycine cleavage system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd06848">
        <property type="entry name" value="GCS_H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00272">
        <property type="entry name" value="GcvH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003016">
        <property type="entry name" value="2-oxoA_DH_lipoyl-BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000089">
        <property type="entry name" value="Biotin_lipoyl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002930">
        <property type="entry name" value="GCV_H"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033753">
        <property type="entry name" value="GCV_H/Fam206"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017453">
        <property type="entry name" value="GCV_H_sub"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011053">
        <property type="entry name" value="Single_hybrid_motif"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11715">
        <property type="entry name" value="PTHR11715"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01597">
        <property type="entry name" value="GCV_H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51230">
        <property type="entry name" value="SSF51230"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00527">
        <property type="entry name" value="gcvH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50968">
        <property type="entry name" value="BIOTINYL_LIPOYL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00189">
        <property type="entry name" value="LIPOYL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3 4" id="KW-0450">Lipoyl</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lipoyl-binding" evidence="5">
        <location>
            <begin position="18"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="modified residue" description="N6-lipoyllysine" evidence="3 4">
        <location>
            <position position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009249"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022823"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00272"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR617453-50"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ70143.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="123" mass="13106" checksum="E87F6C4DE840642B" modified="2015-12-09" version="1">MTTYYSKDHEWISVEGGTATIGITAYAQEQLGDVVFVELPETGKALSQGDEAAVVESVKAASEVYAPIDGEVTAANDVLADEPAKVNEDPEGAAWFIKMTVGNEGQLADLMDEAAYKAYIETL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8V5</accession>
    <name>A0A0M7A8V5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 7">Phosphoribosylamine--glycine ligase</fullName>
            <ecNumber evidence="2 7">6.3.4.13</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">GARS</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">Glycinamide ribonucleotide synthetase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">Phosphoribosylglycinamide synthetase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7 10" type="primary">purD</name>
        <name evidence="10" type="ORF">LAX5112_02340</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>5-phospho-beta-D-ribosylamine + ATP + glycine = ADP + H(+) + N(1)-(5-phospho-beta-D-ribosyl)glycinamide + phosphate</text>
            <dbReference type="Rhea" id="RHEA:17453"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57305"/>
            <dbReference type="ChEBI" id="CHEBI:58681"/>
            <dbReference type="ChEBI" id="CHEBI:143788"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.4.13"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1 7">Purine metabolism; IMP biosynthesis via de novo pathway; N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-alpha-D-ribose 1-diphosphate: step 2/2.</text>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the GARS family.</text>
    </comment>
    <dbReference type="EC" id="6.3.4.13" evidence="2 7"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70064.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671964.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02340"/>
    <dbReference type="EnsemblBacteria" id="CTQ70064">
        <property type="protein sequence ID" value="CTQ70064"/>
        <property type="gene ID" value="LAX5112_02340"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00074">
        <property type="reaction ID" value="UER00125"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004637">
        <property type="term" value="F:phosphoribosylamine-glycine ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006189">
        <property type="term" value="P:'de novo' IMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009113">
        <property type="term" value="P:purine nucleobase biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1490.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.600.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00138">
        <property type="entry name" value="GARS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011761">
        <property type="entry name" value="ATP-grasp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013815">
        <property type="entry name" value="ATP_grasp_subdomain_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016185">
        <property type="entry name" value="PreATP-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020561">
        <property type="entry name" value="PRibGlycinamid_synth_ATP-grasp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000115">
        <property type="entry name" value="PRibGlycinamide_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020560">
        <property type="entry name" value="PRibGlycinamide_synth_C-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037123">
        <property type="entry name" value="PRibGlycinamide_synth_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020559">
        <property type="entry name" value="PRibGlycinamide_synth_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020562">
        <property type="entry name" value="PRibGlycinamide_synth_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011054">
        <property type="entry name" value="Rudment_hybrid_motif"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43472">
        <property type="entry name" value="PTHR43472"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01071">
        <property type="entry name" value="GARS_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02843">
        <property type="entry name" value="GARS_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02844">
        <property type="entry name" value="GARS_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01210">
        <property type="entry name" value="GARS_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51246">
        <property type="entry name" value="SSF51246"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52440">
        <property type="entry name" value="SSF52440"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00877">
        <property type="entry name" value="purD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50975">
        <property type="entry name" value="ATP_GRASP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00184">
        <property type="entry name" value="GARS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 7 10" id="KW-0436">Ligase</keyword>
    <keyword evidence="4 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5 7" id="KW-0658">Purine biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ATP-grasp" evidence="9">
        <location>
            <begin position="107"/>
            <end position="312"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005174"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00013255"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00138"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00409"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ70064.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="423" mass="44256" checksum="BE679CDEBF7099D9" modified="2015-12-09" version="1">MKVLLIGSGGREHSLAWALAKSPKLTKLYAAPGNAGIAAHAELSDLDVSDHAAVITFCRDKQIEFVVVGPEAPLVAGLVDDLDAAGIKAFGPSKAAAQLEGSKAFTKAVCDEANIPTAGYGRFDNAADALNYVRTKGAPIVIKADGLAAGKGVVVAMTLADAEAAVTDCFDGTFGAAGSEVVIEEFLEGEEASFFVLSDGINALPLATAQDHKRAYDGDEGPNTGGMGAYSPAPVLTDDLVADVMRSIIEPTIATLSKRGTPFKGVLYAGLMITSDGPKLIEYNTRFGDPECQVLMMRLKSDLLELMIASADGTLDQSHADWHDDVALTVVMAAKGYPGVYKKGTEIKGLNVISSDEAEVFHAGTKSDGDKILANGGRVLNITALGTSVKDAQEAAYKAVSKIDWPEGFCRSDIGWRAVARET</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A906</accession>
    <name>A0A0M7A906_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">SURF1-like protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">LAX5112_02364</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cell membrane</location>
            <topology evidence="4">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the SURF1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70114.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671983.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02364"/>
    <dbReference type="EnsemblBacteria" id="CTQ70114">
        <property type="protein sequence ID" value="CTQ70114"/>
        <property type="gene ID" value="LAX5112_02364"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="CDD" id="cd06662">
        <property type="entry name" value="SURF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002994">
        <property type="entry name" value="Surf1/Shy1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045214">
        <property type="entry name" value="Surf1/Surf4"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23427">
        <property type="entry name" value="PTHR23427"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02104">
        <property type="entry name" value="SURF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50895">
        <property type="entry name" value="SURF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="3 4" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2 4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="7"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="217"/>
            <end position="243"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU363076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ70114.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="254" mass="27536" checksum="26C389370033085F" modified="2015-12-09" version="1">MGRARKLIIPAIAAMIGLAILLNLGFWQVRRLAEKETLIEQVETGLKSAPVAAPGMADWDGLGDEDDYRRVSVAGRFLEQNVFYYLSLTDPVGTYGGPGELVYSPFETADGWTVLINRGFLPDGVPDDIKRQALTPPPGDQTLVGLLRLSETPVWTTPAPDLNANLWFARDTDAMAEAMNVGGNLAPYSIDLEAVHTPEGGLPQAGETLVRFKNDHLGYALTWFGLAATLVGVFLAYAAAVLWPRKQEHSASVD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A919</accession>
    <name>A0A0M7A919_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">General stress protein 18</fullName>
            <ecNumber evidence="3">3.2.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yfkM_1</name>
        <name evidence="3" type="ORF">LAX5112_02645</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase C56 family.</text>
    </comment>
    <dbReference type="EC" id="3.2.-.-" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70896.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040450852.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02645"/>
    <dbReference type="EnsemblBacteria" id="CTQ70896">
        <property type="protein sequence ID" value="CTQ70896"/>
        <property type="gene ID" value="LAX5112_02645"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016798">
        <property type="term" value="F:hydrolase activity, acting on glycosyl bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008152">
        <property type="term" value="P:metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006286">
        <property type="entry name" value="C56_PfpI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002818">
        <property type="entry name" value="DJ-1/PfpI"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42733">
        <property type="entry name" value="PTHR42733"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01965">
        <property type="entry name" value="DJ-1_PfpI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="SSF52317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01382">
        <property type="entry name" value="PfpI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51276">
        <property type="entry name" value="PEPTIDASE_C56_PFPI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DJ-1_PfpI" evidence="2">
        <location>
            <begin position="5"/>
            <end position="183"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008542"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01965"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ70896.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="197" mass="20915" checksum="311675AD854B3B0F" modified="2015-12-09" version="1">MSAQKILMITGDFTEDYETMVPFQALLAMGYEVDAVCPGKKAGESVATCIHDFEGDQTYTEKRGHNFTLNATFADINPADYDALVIPGGRAPEYLRLDGAVLEAVSHFMSENKPVAAICHGAQILTAAKVIEGRTVSAYPACRPEVELAGATYADIAVDAAVTDGNLVTAPAWPAHPAWIAQFHKVLSSAQQGSLAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9X3</accession>
    <name>A0A0M7A9X3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Deoxyribodipyrimidine photo-lyase-related protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02760</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71262.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672318.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02760"/>
    <dbReference type="EnsemblBacteria" id="CTQ71262">
        <property type="protein sequence ID" value="CTQ71262"/>
        <property type="gene ID" value="LAX5112_02760"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036134">
        <property type="entry name" value="Crypto/Photolyase_FAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007357">
        <property type="entry name" value="PhrB-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04244">
        <property type="entry name" value="DPRP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48173">
        <property type="entry name" value="SSF48173"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0456">Lyase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ71262.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="517" mass="59151" checksum="44CDB0A49A49AD8C" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9Y7</accession>
    <name>A0A0M7A9Y7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uridine/cytidine kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02905</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71679.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ71679">
        <property type="protein sequence ID" value="CTQ71679"/>
        <property type="gene ID" value="LAX5112_02905"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0418">Kinase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ71679.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="138" mass="15350" checksum="0413958D0E8265C0" modified="2015-12-09" version="1">MLVLITGASCSGKTSFARNLSAVQPYQLDLYDGVETLLPELETRHPDAEGSVVIEGLLSGSVSASRELIERCDCVIVLQTPITIRLLRSLRRDGISGWIRFIRNEFAWSRYCAPLLKPSETTVPIRHVSWQPERVGPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAI7</accession>
    <name>A0A0M7AAI7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative solute:sodium symporter small subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02556</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70634.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040450876.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02556"/>
    <dbReference type="EnsemblBacteria" id="CTQ70634">
        <property type="protein sequence ID" value="CTQ70634"/>
        <property type="gene ID" value="LAX5112_02556"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019886">
        <property type="entry name" value="Na_symporter_ssu_prd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13937">
        <property type="entry name" value="DUF4212"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03647">
        <property type="entry name" value="Na_symport_sm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="52"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="domain" description="DUF4212" evidence="2">
        <location>
            <begin position="8"/>
            <end position="84"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13937"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ70634.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="86" mass="9784" checksum="D0E2894F67AE865F" modified="2015-12-09" version="1">MSENSSNNEYWSANMRIIKISLVIWALVSFGFGILLRPLLSGIPVGGTDLGFWFAQQGSILVFLGLIFFYAWRMNQLDREHGVDEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABL3</accession>
    <name>A0A0M7ABL3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">TRAP-type C4-dicarboxylate transport system, small permease component</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">LAX5112_02725</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71123.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672276.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02725"/>
    <dbReference type="EnsemblBacteria" id="CTQ71123">
        <property type="protein sequence ID" value="CTQ71123"/>
        <property type="gene ID" value="LAX5112_02725"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007387">
        <property type="entry name" value="TRAP_DctQ"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35011">
        <property type="entry name" value="PTHR35011"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04290">
        <property type="entry name" value="DctQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="21"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="61"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="100"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="141"/>
            <end position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ71123.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="171" mass="18462" checksum="841B745EFED1EEC5" modified="2015-12-09" version="1">MIVTNVSEKPTAGRTSRVRPVINAVLGGACLVVLFALIGLTCVDVVARYLFNSPVTGAYELTELLLATLIFLALPLTTLAGEHIEVELLDGAKSQFLKRFGTLIAGICTTGIFILIAMELTEHAEKLQRRGQVTDSLEIPLYLIGWLGAASFSVSAIAAAVFFYSRFRKEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABU2</accession>
    <name>A0A0M7ABU2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Farnesyl diphosphate synthase</fullName>
            <ecNumber evidence="3">2.5.1.10</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02970</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the FPP/GGPP synthase family.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.10" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71912.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672476.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02970"/>
    <dbReference type="EnsemblBacteria" id="CTQ71912">
        <property type="protein sequence ID" value="CTQ71912"/>
        <property type="gene ID" value="LAX5112_02970"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004337">
        <property type="term" value="F:geranyltranstransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008299">
        <property type="term" value="P:isoprenoid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00685">
        <property type="entry name" value="Trans_IPPS_HT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.600.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008949">
        <property type="entry name" value="Isoprenoid_synthase_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000092">
        <property type="entry name" value="Polyprenyl_synt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033749">
        <property type="entry name" value="Polyprenyl_synt_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00348">
        <property type="entry name" value="polyprenyl_synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48576">
        <property type="entry name" value="SSF48576"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00723">
        <property type="entry name" value="POLYPRENYL_SYNTHASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00444">
        <property type="entry name" value="POLYPRENYL_SYNTHASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0460">Magnesium</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU004466"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ71912.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="289" mass="30384" checksum="0F66B029A3CF5B24" modified="2015-12-09" version="1">MDLSDRIETGMQTAIRYATANGCPQKLGNALKYAVFPGGARIRPRLCLAVSLACGDKDPRVANACATAIELLHCASLVHDDLPCFDNAATRRGKPSVHKEYGEEIALLVGDGLIVTAFETLARETLHAPEQTARLVATIANAVGSPYGIVAGQAWESEEKINITAYHRAKTASLFTGAVSAGALSSYGNPLDWYALADALGAAYQVADDLYDAMDDTDSMGKPAGQDAENGRPNLVAELGVQGALKKLQELVETAADSIPDCEGADLLSAMIHKEAKRLMPAKLAASAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACE8</accession>
    <name>A0A0M7ACE8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Hemin-binding lipoprotein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">hbpA_2</name>
        <name evidence="5" type="ORF">LAX5112_02817</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the bacterial solute-binding protein 5 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71423.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02817"/>
    <dbReference type="EnsemblBacteria" id="CTQ71423">
        <property type="protein sequence ID" value="CTQ71423"/>
        <property type="gene ID" value="LAX5112_02817"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030288">
        <property type="term" value="C:outer membrane-bounded periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030678">
        <property type="entry name" value="Peptide/Ni-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039424">
        <property type="entry name" value="SBP_5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000914">
        <property type="entry name" value="SBP_5_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30290">
        <property type="entry name" value="PTHR30290"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00496">
        <property type="entry name" value="SBP_bac_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002741">
        <property type="entry name" value="MppA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="3" id="KW-0574">Periplasm</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SBP_bac_5" evidence="4">
        <location>
            <begin position="95"/>
            <end position="508"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ71423.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="605" mass="68737" checksum="3E5D553CC8FACCFE" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACW7</accession>
    <name>A0A0M7ACW7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_03387</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72965.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672791.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03387"/>
    <dbReference type="EnsemblBacteria" id="CTQ72965">
        <property type="protein sequence ID" value="CTQ72965"/>
        <property type="gene ID" value="LAX5112_03387"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043231">
        <property type="term" value="C:intracellular membrane-bounded organelle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051537">
        <property type="term" value="F:2 iron, 2 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.5.90">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018967">
        <property type="entry name" value="FeS-contain_CDGSH-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042216">
        <property type="entry name" value="MitoNEET_CISD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09360">
        <property type="entry name" value="zf-CDGSH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00704">
        <property type="entry name" value="ZnF_CDGSH"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0408">Iron</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ZnF_CDGSH" evidence="3">
        <location>
            <begin position="9"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="domain" description="ZnF_CDGSH" evidence="3">
        <location>
            <begin position="47"/>
            <end position="79"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00704"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ72965.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="79" mass="8428" checksum="FB8D03761CF596C2" modified="2015-12-09" version="1">MSEPVVAQKAPYAVEVEAGKNYFWCACGKSGNQPFCDGSHKGTDFAPVKYTAEKDGKAFFCGCKATSKSPLCDGTHSKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADT8</accession>
    <name>A0A0M7ADT8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Bile acid transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02931</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71794.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008191643.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02931"/>
    <dbReference type="EnsemblBacteria" id="CTQ71794">
        <property type="protein sequence ID" value="CTQ71794"/>
        <property type="gene ID" value="LAX5112_02931"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1530.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002657">
        <property type="entry name" value="BilAc:Na_symport/Acr3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004710">
        <property type="entry name" value="Bilac:Na_transpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038770">
        <property type="entry name" value="Na+/solute_symporter_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10361">
        <property type="entry name" value="PTHR10361"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01758">
        <property type="entry name" value="SBF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="6"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="38"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="68"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="97"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="133"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="163"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="194"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="226"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="254"/>
            <end position="277"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ71794.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="293" mass="31529" checksum="AF2923D7730E0DB0" modified="2015-12-09" version="1">MVGPFEQALLAAMIFVIMLGMGASLTPRDFYLALRRPYGLAVGVVSQYGFMPFIGFLMTLALALPEPIAIGLLIMSCMPGGTTSNIFAYFSKGNLALSVLMTVTSTVFGVILIPIVLVIYATALDLEIPRENIIATLVILLVPVAIGMGLRKISANIGAVTEFFGSALALFFIAFIAISWIPRNWQFLLTTTPATYFAAIMLGVFGILVGYLFARSLKLHPRNVRTIALETGIQNGPLAVAIIALTFPSDEQQGIMAVAALYSLFIVITSTLVTLIFRRANTAAEQKIPDSLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AE07</accession>
    <name>A0A0M7AE07_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glyoxylate/hydroxypyruvate reductase A</fullName>
            <ecNumber evidence="2">1.1.1.79</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ghrA</name>
        <name evidence="2" type="ORF">LAX5112_03265</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.1.1.79" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72672.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672684.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03265"/>
    <dbReference type="EnsemblBacteria" id="CTQ72672">
        <property type="protein sequence ID" value="CTQ72672"/>
        <property type="gene ID" value="LAX5112_03265"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030267">
        <property type="term" value="F:glyoxylate reductase (NADP+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006140">
        <property type="entry name" value="D-isomer_DH_NAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02826">
        <property type="entry name" value="2-Hacid_dh_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="2-Hacid_dh_C" evidence="1">
        <location>
            <begin position="110"/>
            <end position="280"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02826"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72672.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="315" mass="34435" checksum="3F834A6C356D8A9A" modified="2015-12-09" version="1">MMPIIPFVSEVGGVERKAWKDALPEALRGIAQVKAFDDLTEAERKEAKVAIVANPDPMKVGSLPNLVWVQSLWAGVERLVAELPDTGPQIVRLADPQMAETMSEAVLAWSLYLHRDMPAYMRQQRDHVWQHHLLKTPQEVTIGVLGIGELGSASALRLKANGFNVLGWSRSRKTLKGIETFAGAEELGTVLARSDILVLLMPLTSDTRGLIGKQALASVKPGAKLINFARGPIIDTNALLAALDDCRVGHAVLDVFDQEPLEKDHPFWSHPEVTVLPHISAPTITSTASAIVAQNIKQYLETGSIPQTVDRQRGY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AE64</accession>
    <name>A0A0M7AE64_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF1863 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03360</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72907.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72907">
        <property type="protein sequence ID" value="CTQ72907"/>
        <property type="gene ID" value="LAX5112_03360"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036490">
        <property type="entry name" value="MTH538_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015032">
        <property type="entry name" value="MTH538_TIR-like_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08937">
        <property type="entry name" value="DUF1863"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52206">
        <property type="entry name" value="SSF52206"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF1863" evidence="1">
        <location>
            <begin position="6"/>
            <end position="120"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08937"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72907.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="169" mass="19844" checksum="F53F27F53C3A649A" modified="2015-12-09" version="1">MAYRNKVFVSFDGDSDMSYYRLMLAWRKSDHSSFNFYNAHDLTSSRDSSLELTIKSSLQQRMINSKLFILLVGANTRYLYKFVRWEIEQAIKRDLPIVCVNLNGLRHIDNERCPAILRDELALHVSFNSRIIERAINEWPSSKKNLEIQGRKGPFFYPEDVYSLLGIVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFK8</accession>
    <name>A0A0M7AFK8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03465</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73222.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03465"/>
    <dbReference type="EnsemblBacteria" id="CTQ73222">
        <property type="protein sequence ID" value="CTQ73222"/>
        <property type="gene ID" value="LAX5112_03465"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051213">
        <property type="term" value="F:dioxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.180.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029068">
        <property type="entry name" value="Glyas_Bleomycin-R_OHBP_Dase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004360">
        <property type="entry name" value="Glyas_Fos-R_dOase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037523">
        <property type="entry name" value="VOC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00903">
        <property type="entry name" value="Glyoxalase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54593">
        <property type="entry name" value="SSF54593"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51819">
        <property type="entry name" value="VOC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0223">Dioxygenase</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="VOC" evidence="1">
        <location>
            <begin position="84"/>
            <end position="209"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51819"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73222.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="211" mass="23791" checksum="84839CD829FEC360" modified="2015-12-09" version="1">MDPDKLGFRPLRVGWAPYSGREILFQEPRGGFIRRKYFYQPLSCGIIVVLHGTASLHLPHYNLYGITCAGLPLFFKETFLVTIGINHLGLTVRDLDQTTAFFTDCLGWALLAREDSYPRTTVSDGTCRLTLWQADRARAMTGFDRKTNIGLHHLALEVPSRDALDELAAKVRNWPGVQMEFNPEPMGTGPRMHTMFSEPGGIRLEIIWPAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFM7</accession>
    <name>A0A0M7AFM7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Chemotaxis protein CheY</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">cheY_4</name>
        <name evidence="3" type="ORF">LAX5112_03223</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72553.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672651.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03223"/>
    <dbReference type="EnsemblBacteria" id="CTQ72553">
        <property type="protein sequence ID" value="CTQ72553"/>
        <property type="gene ID" value="LAX5112_03223"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="2">
        <location>
            <begin position="3"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="1">
        <location>
            <position position="52"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ72553.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="121" mass="13589" checksum="8E5F5A1B84B0DE4D" modified="2015-12-09" version="1">MKQCLVVDDSSVIRKVARRILEDMNFEIVEAEDGQKALDECRKTMPDAILLDWNMPVMDGLEFLTSLRAEAGGESPVVVFCTTENDVAHIARAIRAGANEYIMKPFDREIVEAKFQEVGLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="36" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AG18</accession>
    <name>A0A0M7AG18_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Bifunctional NAD(P)H-hydrate repair enzyme</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="11">Nicotinamide nucleotide repair protein</fullName>
        </alternativeName>
        <domain>
            <recommendedName>
                <fullName evidence="11">ADP-dependent (S)-NAD(P)H-hydrate dehydratase</fullName>
                <ecNumber evidence="11">4.2.1.136</ecNumber>
            </recommendedName>
            <alternativeName>
                <fullName evidence="11">ADP-dependent NAD(P)HX dehydratase</fullName>
            </alternativeName>
        </domain>
        <domain>
            <recommendedName>
                <fullName evidence="11">NAD(P)H-hydrate epimerase</fullName>
                <ecNumber evidence="11">5.1.99.6</ecNumber>
            </recommendedName>
        </domain>
    </protein>
    <gene>
        <name evidence="13" type="primary">nnr</name>
        <name evidence="9" type="synonym">nnrD</name>
        <name evidence="10" type="synonym">nnrE</name>
        <name evidence="13" type="ORF">LAX5112_03519</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8 11">Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.</text>
    </comment>
    <comment type="function">
        <text evidence="9">Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.</text>
    </comment>
    <comment type="function">
        <text evidence="10">Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 10 11">
            <text>(6R)-NADHX = (6S)-NADHX</text>
            <dbReference type="Rhea" id="RHEA:32215"/>
            <dbReference type="ChEBI" id="CHEBI:64074"/>
            <dbReference type="ChEBI" id="CHEBI:64075"/>
            <dbReference type="EC" id="5.1.99.6"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2 10 11">
            <text>(6R)-NADPHX = (6S)-NADPHX</text>
            <dbReference type="Rhea" id="RHEA:32227"/>
            <dbReference type="ChEBI" id="CHEBI:64076"/>
            <dbReference type="ChEBI" id="CHEBI:64077"/>
            <dbReference type="EC" id="5.1.99.6"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3 9 11">
            <text>(6S)-NADHX + ADP = AMP + H(+) + NADH + phosphate</text>
            <dbReference type="Rhea" id="RHEA:32223"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:64074"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="4.2.1.136"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4 9 11">
            <text>(6S)-NADPHX + ADP = AMP + H(+) + NADPH + phosphate</text>
            <dbReference type="Rhea" id="RHEA:32235"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:64076"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="4.2.1.136"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="10 11">
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </cofactor>
        <text evidence="10 11">Binds 1 potassium ion per subunit.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="9">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="9">Homotetramer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the NnrD/CARKD family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="10">Belongs to the NnrE/AIBP family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6 11">In the C-terminal section; belongs to the NnrD/CARKD family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5 11">In the N-terminal section; belongs to the NnrE/AIBP family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.136" evidence="11"/>
    <dbReference type="EC" id="5.1.99.6" evidence="11"/>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73366.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672891.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03519"/>
    <dbReference type="EnsemblBacteria" id="CTQ73366">
        <property type="protein sequence ID" value="CTQ73366"/>
        <property type="gene ID" value="LAX5112_03519"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052855">
        <property type="term" value="F:ADP-dependent NAD(P)H-hydrate dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052856">
        <property type="term" value="F:NADHX epimerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052857">
        <property type="term" value="F:NADPHX epimerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046496">
        <property type="term" value="P:nicotinamide nucleotide metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01171">
        <property type="entry name" value="YXKO-related"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1190.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10260">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01965">
        <property type="entry name" value="NADHX_dehydratase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01966">
        <property type="entry name" value="NADHX_epimerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000631">
        <property type="entry name" value="CARKD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030677">
        <property type="entry name" value="Nnr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029056">
        <property type="entry name" value="Ribokinase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004443">
        <property type="entry name" value="YjeF_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036652">
        <property type="entry name" value="YjeF_N_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01256">
        <property type="entry name" value="Carb_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03853">
        <property type="entry name" value="YjeF_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF017184">
        <property type="entry name" value="Nnr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53613">
        <property type="entry name" value="SSF53613"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64153">
        <property type="entry name" value="SSF64153"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00196">
        <property type="entry name" value="yjeF_cterm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00197">
        <property type="entry name" value="yjeF_nterm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51383">
        <property type="entry name" value="YJEF_C_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51385">
        <property type="entry name" value="YJEF_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 11" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7 10 11" id="KW-0413">Isomerase</keyword>
    <keyword evidence="9 11" id="KW-0456">Lyase</keyword>
    <keyword evidence="10 11" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9 11" id="KW-0520">NAD</keyword>
    <keyword evidence="9 11" id="KW-0521">NADP</keyword>
    <keyword evidence="9 11" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10 11" id="KW-0630">Potassium</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="YjeF N-terminal" evidence="12">
        <location>
            <begin position="11"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="region of interest" description="NADPHX" evidence="10">
        <location>
            <begin position="58"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="region of interest" description="NADPHX" evidence="10">
        <location>
            <begin position="132"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="59"/>
        </location>
        <ligand>
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="128"/>
        </location>
        <ligand>
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="161"/>
        </location>
        <ligand>
            <name>(6S)-NADPHX</name>
            <dbReference type="ChEBI" id="CHEBI:64076"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="164"/>
        </location>
        <ligand>
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="263"/>
        </location>
        <ligand>
            <name>(6S)-NADPHX</name>
            <dbReference type="ChEBI" id="CHEBI:64076"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="326"/>
        </location>
        <ligand>
            <name>(6S)-NADPHX</name>
            <dbReference type="ChEBI" id="CHEBI:64076"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="380"/>
        </location>
        <ligand>
            <name>(6S)-NADPHX</name>
            <dbReference type="ChEBI" id="CHEBI:64076"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="414"/>
            <end position="418"/>
        </location>
        <ligand>
            <name>AMP</name>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="443"/>
        </location>
        <ligand>
            <name>AMP</name>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="444"/>
        </location>
        <ligand>
            <name>(6S)-NADPHX</name>
            <dbReference type="ChEBI" id="CHEBI:64076"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000013"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00000909"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00001026"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00001241"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00006001"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00009524"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00025153"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01965"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRNR" id="PIRNR017184"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS51385"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="CTQ73366.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="503" mass="51188" checksum="116DE07D66444001" modified="2015-12-09" version="1">MTAALLTPQEMGQADCLTIEGGLPGLDLMERAGSAVAGMAAKHAPASGRIHILCGPGNNGGDGFVAARLLAEKGYDVRVDLLTSPSGLKGDAAAAFAAMTLPFEILTSGDQLIGNIADRFAGADVIVDALFGAGLDRPLSGPAAELVEAVNGSNAAILAVDLPSGINGATGEIMGSAIEAHATVTFFLKKPGHLLFPGRGLCGSITVAQIGIETGVLDTIGPATFENKPDLWLASWPRPAVNGHKYSKGHAVVFSGPTARTGAARLSAMAALRTGAGLVTLASPPDAMMVNASHLTAVMLKKVSGPEAIPELLSDPRLNAVLIGPGYGIGEATKTAVEAIVAKGRSLVLDADALTSFSENPQKLFDLIKENGSPVILTPHDGEFMRLFPDLADRKKLGRAREAARRSGATVVLKGPDTVIAAPDGRAAINCNAPPFLATAGSGDVLAGVAVGLLAQGVPAFEAACQAVWLHGEAGLAAGPGLIAEDLPAALREPLRHLWTSLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGF1</accession>
    <name>A0A0M7AGF1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03319</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72823.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72823">
        <property type="protein sequence ID" value="CTQ72823"/>
        <property type="gene ID" value="LAX5112_03319"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="38"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72823.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="113" mass="12729" checksum="0F157AEAE541C55E" modified="2015-12-09" version="1">MPFQDTYFEPKTSAPRLAADGYEPQDQVETAPPKTSAQLTQQTAGELETMMLFLRRARDRAVVIRENAPAGSYLESVLHRTILGIDQELAQLKYLLTRSELPKPSPTRMRPAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGH2</accession>
    <name>A0A0M7AGH2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Cytochrome c biogenesis protein TlpA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">tlpA</name>
        <name evidence="6" type="ORF">LAX5112_03722</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ73999.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673055.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03722"/>
    <dbReference type="EnsemblBacteria" id="CTQ73999">
        <property type="protein sequence ID" value="CTQ73999"/>
        <property type="gene ID" value="LAX5112_03722"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015036">
        <property type="term" value="F:disulfide oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017004">
        <property type="term" value="P:cytochrome complex assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013740">
        <property type="entry name" value="Redoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017937">
        <property type="entry name" value="Thioredoxin_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013766">
        <property type="entry name" value="Thioredoxin_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08534">
        <property type="entry name" value="Redoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00194">
        <property type="entry name" value="THIOREDOXIN_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51352">
        <property type="entry name" value="THIOREDOXIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0201">Cytochrome c-type biogenesis</keyword>
    <keyword evidence="2" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0676">Redox-active center</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="15"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="domain" description="Thioredoxin" evidence="5">
        <location>
            <begin position="68"/>
            <end position="216"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022748"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ73999.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="220" mass="22985" checksum="BBDC2BBCCC960066" modified="2015-12-09" version="1">MTKPTEPAKSSNRKLYAAGLAGAVAAVAALYVINGQNGNIGSGESCSAALVSAEAVAPHAKGEVAAFLPASQPLDLSNLTFLSPDDQPITMADFEGRTVLLNLWATWCAPCRKEMPALDELQAELGDADFEVVAVNLDRGGPEKPKAFLEEIGVGNLAYYHDAKNGLLKDLRKVARATGLPTTILISPDGCEVGTMYGPAEWASGEAKALINASMTKPEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGJ4</accession>
    <name>A0A0M7AGJ4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Trehalose import ATP-binding protein SugC</fullName>
            <ecNumber evidence="10">3.6.3.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">sugC_2</name>
        <name evidence="10" type="ORF">LAX5112_03509</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Peripheral membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.-" evidence="10"/>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73340.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672884.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03509"/>
    <dbReference type="EnsemblBacteria" id="CTQ73340">
        <property type="protein sequence ID" value="CTQ73340"/>
        <property type="gene ID" value="LAX5112_03509"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008643">
        <property type="term" value="P:carbohydrate transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03301">
        <property type="entry name" value="ABC_MalK_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015855">
        <property type="entry name" value="ABC_transpr_MalK-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008995">
        <property type="entry name" value="Mo/tungstate-bd_C_term_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013611">
        <property type="entry name" value="Transp-assoc_OB_typ2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08402">
        <property type="entry name" value="TOBE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50331">
        <property type="entry name" value="SSF50331"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 8 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="10" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-0472">Membrane</keyword>
    <keyword evidence="5 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ABC transporter" evidence="9">
        <location>
            <begin position="4"/>
            <end position="250"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="36"/>
            <end position="43"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ73340.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="384" mass="41370" checksum="3317F08025BC3EB9" modified="2015-12-09" version="1">MAAISIKAIEKSFGDTSVLEGINLDIAPGEFLTLVGPSGCGKSTLLRILAGLEAPGSGDVLIDGRNVNQVRPADRNLAMVFQSYALYPHLTVGQNMMTPLRLRDLSFAERLPFAGPLFARSKYTALWAQVAEAAKVLQIDHLLDRKPGQLSGGQRQRAALGRAMVRKPAGFLMDEPLSNLDAALRIHMRSELAELHRSLATTFVYVTHDQAEALTMSDRMAVMMDGNILQLGTPDEIYNNPQDIRVAEFVGAPKINLLPGHLDSNGHARCGDVVLTRVAATSSDTITIGLRPEHLTLCDDTDPEALKGRVVHKENLGADIYLHISMKDGAHRLVIRAAPIDGVAVSIGQDVAFKRHHGAAMIFEADGKRIGLDNNAGTAVAEVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHG3</accession>
    <name>A0A0M7AHG3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03422</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ73064.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672819.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03422"/>
    <dbReference type="EnsemblBacteria" id="CTQ73064">
        <property type="protein sequence ID" value="CTQ73064"/>
        <property type="gene ID" value="LAX5112_03422"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="46"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="110"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="152"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="193"/>
            <end position="215"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73064.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="216" mass="22807" checksum="2BD8ABDE9DA68691" modified="2015-12-09" version="1">MTSAAGLWLVVVASGIYHGINPGMGWPLAVSAALFEGQRTALLRALAALGFGHLLAMLGILLPFAVMFVLVEYQREIRIGASCLVIAAGLYLVINRRHPRFLSRVKPTRLALWSFLVAMAHGAGLMLVPIYLGLCGPGGPGPDYGAPVQLMSFNIGIALGVAVLHTAAMILSGGAVAYAVYRILGLKFVSQSWFNLDVVWALSLILVGGIGLWAAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIE7</accession>
    <name>A0A0M7AIE7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Fatty acyl-CoA reductase</fullName>
            <ecNumber evidence="1">1.2.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">acr1_2</name>
        <name evidence="1" type="ORF">LAX5112_03857</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.2.1.-" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74417.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03857"/>
    <dbReference type="EnsemblBacteria" id="CTQ74417">
        <property type="protein sequence ID" value="CTQ74417"/>
        <property type="gene ID" value="LAX5112_03857"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00106">
        <property type="entry name" value="adh_short"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ74417.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="257" mass="28120" checksum="2747ED515DDF23F9" modified="2015-12-09" version="1">MRRVWWKSAKELASNMTQDFEGRVALVTGASRGIGYQLAKQLAARGAHVIAIARTVGGLEDLDDEIQSAGGQATLVPVDLTDHDALDRLGAAIYERWKKLDVFIGNAGMLGILSPLGHISPKDFEKVMSVNVTANWRLIRSLDPLLRQSDAGRALFLTSVQASTCPAFWGLQSISKAGVEAMARTWASESLKTNMKINLADPGPVRTGLRAKAMPGEPPENLLHPRDIAPELVELVKTDVYETGKLYDRVSREWVSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIX7</accession>
    <name>A0A0M7AIX7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_04102</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ75058.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673364.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75058">
        <property type="protein sequence ID" value="CTQ75058"/>
        <property type="gene ID" value="LAX5112_04102"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809366" evidence="2">
        <location>
            <begin position="48"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="134"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="162"/>
            <end position="181"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ75058.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="181" mass="19166" checksum="DE8C97813D6DEFEF" modified="2015-12-09" version="1">MTQRWRPIGTSLTASPFRHRLYKRVLKPAIVGLAALAGTGVASSATAQPVNCDAYARSYANAHVNPDPADLNIYENGARGAVAGGIWDGPSGARRGAAIGGALSVLDNLGSYPAGWQSLYDLAYQRCANEQSGVTHRPTTLGDPNYYGRPLIRGQEPPEALEPRPELAPPPPMPPAASPRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJ35</accession>
    <name>A0A0M7AJ35_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Inner membrane protein YiaW</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yiaW_1</name>
        <name evidence="3" type="ORF">LAX5112_04025</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74889.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_050776007.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74889">
        <property type="protein sequence ID" value="CTQ74889"/>
        <property type="gene ID" value="LAX5112_04025"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011223">
        <property type="entry name" value="UCP028770"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11742">
        <property type="entry name" value="DUF3302"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="13"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="54"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="91"/>
            <end position="136"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ74889.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="136" mass="14654" checksum="315F32AC14C5FB24" modified="2015-12-09" version="1">MNLIDFKLDGYDYLTFLIGVLAVIAFFYVMITLGGLPGKLAEKRKHPHAESVKLGGWIGLFTVFPWIHALMWSYHDSLTIDIRKLPKGGQIKTNADAEDGGGDILSATPALSGASDETEAQVGKQPEEQPKPGGAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJH0</accession>
    <name>A0A0M7AJH0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative enoyl-CoA hydratase echA8</fullName>
            <ecNumber evidence="2">4.2.1.17</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">echA8_5</name>
        <name evidence="2" type="ORF">LAX5112_03946</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the enoyl-CoA hydratase/isomerase family.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.17" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74711.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008195123.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03946"/>
    <dbReference type="EnsemblBacteria" id="CTQ74711">
        <property type="protein sequence ID" value="CTQ74711"/>
        <property type="gene ID" value="LAX5112_03946"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004300">
        <property type="term" value="F:enoyl-CoA hydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.12.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029045">
        <property type="entry name" value="ClpP/crotonase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001753">
        <property type="entry name" value="Enoyl-CoA_hydra/iso"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014748">
        <property type="entry name" value="Enoyl-CoA_hydra_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00378">
        <property type="entry name" value="ECH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52096">
        <property type="entry name" value="SSF52096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005254"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74711.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="261" mass="27915" checksum="7720F4F76A32B36C" modified="2015-12-09" version="1">MSFETISIETDDRGVATLTLNRPEKHNSLSARMIDELTAAADQLGSDGSVRVVVLTGAGESFCAGGDLAWMREQMAADRDTRMAEARKLAMMLKALNELPKPVIGRVQGQAFGGGIGMMSVCDTVVAVDTAKFGLTEVRLGLIPATISPYVLARMGEGKARRVFMSARIFGAEEARDLDLAAKVVSADDLDAAIEKEIKPYLSAAPAAVAASKALARSLGPVITDTVIDDTIRRLADTWETPEANEGTSAFFEKRKPAWTH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJL8</accession>
    <name>A0A0M7AJL8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Putrescine-binding periplasmic protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">potF_3</name>
        <name evidence="7" type="ORF">LAX5112_04110</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the bacterial solute-binding protein 1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ75079.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008189849.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04110"/>
    <dbReference type="EnsemblBacteria" id="CTQ75079">
        <property type="protein sequence ID" value="CTQ75079"/>
        <property type="gene ID" value="LAX5112_04110"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019808">
        <property type="term" value="F:polyamine binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015846">
        <property type="term" value="P:polyamine transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006059">
        <property type="entry name" value="SBP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001188">
        <property type="entry name" value="Sperm_putr-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13416">
        <property type="entry name" value="SBP_bac_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00909">
        <property type="entry name" value="SPERMDNBNDNG"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0574">Periplasm</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="6">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809387" evidence="6">
        <location>
            <begin position="25"/>
            <end position="358"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008520"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ75079.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="358" mass="38960" checksum="6E65FB3DDEBBDF90" modified="2015-12-09" version="1">MKFKSTLTGLLAATMLASAGAAQAETLRLLTWGSYAPDELIQKFEAEYPDIKVEVTFSNNEEMIAKLRATGGAGFDLAQPSHDRIYAAQLEYDIYKPLDLSKIDTDVMEAKLLDGVKENTTIDGGVYAVPHQWGTSGLMADKTKAPDFKGWGDLCDPAYKGKTSMRLKRTILLGTAFSMGENPFDAYSDLEKYQGILDKVADKLIECKANIKAYWKGGDDLSAMMLSGEIVASETWDSTAYKLFDQNPNITFIPPETGALAWIDTFALPRKSKADDAAYKWINFVLRPENVTLMSASTGAIAAVKGGKDLLPEDKKAAVNAAFTDADIDNLKFFANIPPGVEDMEGKTLEKIKAATGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKJ2</accession>
    <name>A0A0M7AKJ2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Betaine aldehyde dehydrogenase</fullName>
            <ecNumber evidence="8">1.2.1.8</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">gbsA</name>
        <name evidence="8" type="ORF">LAX5112_04107</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="6">Belongs to the aldehyde dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.2.1.8" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ75071.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673366.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75071">
        <property type="protein sequence ID" value="CTQ75071"/>
        <property type="gene ID" value="LAX5112_04107"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008802">
        <property type="term" value="F:betaine-aldehyde dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.309.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.605.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016161">
        <property type="entry name" value="Ald_DH/histidinol_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016163">
        <property type="entry name" value="Ald_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016160">
        <property type="entry name" value="Ald_DH_CS_CYS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029510">
        <property type="entry name" value="Ald_DH_CS_GLU"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016162">
        <property type="entry name" value="Ald_DH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015590">
        <property type="entry name" value="Aldehyde_DH_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00171">
        <property type="entry name" value="Aldedh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53720">
        <property type="entry name" value="SSF53720"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00070">
        <property type="entry name" value="ALDEHYDE_DEHYDR_CYS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00687">
        <property type="entry name" value="ALDEHYDE_DEHYDR_GLU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0521">NADP</keyword>
    <keyword evidence="3 6 8" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-0630">Potassium</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aldedh" evidence="7">
        <location>
            <begin position="34"/>
            <end position="492"/>
        </location>
    </feature>
    <feature type="active site" evidence="4">
        <location>
            <position position="266"/>
        </location>
    </feature>
    <feature type="active site" evidence="5">
        <location>
            <position position="300"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022958"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003345"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ75071.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="497" mass="52313" checksum="C2361DD7A651EB0A" modified="2015-12-09" version="1">MASQQDLIAEYEKTGTLSALPLGQFIDGAFSQPSHNRTMESFDPGKGAAFARFTAGTAEDVDAAVGSSRKAFETVWRDMAPVERARILLKTSELIRENLDLLAVVESLDSGKPLQEARGDVGGAARTFEYYAGACDKLQGDSFPLAGDYIGYSVHEPVGVTAHIIPWNFPISTAARGFAPALAAGCTVVAKPAEQTPFTALLLAKLLSDAGLPDGVCNVVTGTGVETGAPLTQHTGVDHITFTGSVQTGKAVMKAAADDVTRVVLELGGKSPVVVLADCDKEQALSGIMGAIFENAGQICSAGSRLVIEKSIHEEFVAELVKRTKALKIGHGLSQPELGPVNSAEHLEKIGGFIERAKDRGAKIAVGGNVTTDPATGEGWFFEPTIVDAVPAKDELAQEEIFGPVLTVQVADDADHALELANDCQYGLVAGIYTSNFAKAHQLARKIDAGQIYINEYFAGGIEVPFGGNKKSGFGREKGIEGLKSYCKTKSIAAKIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKM8</accession>
    <name>A0A0M7AKM8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Flagellar biosynthesis regulatory protein FlaF</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04081</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ75002.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673352.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04081"/>
    <dbReference type="EnsemblBacteria" id="CTQ75002">
        <property type="protein sequence ID" value="CTQ75002"/>
        <property type="gene ID" value="LAX5112_04081"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044781">
        <property type="term" value="P:bacterial-type flagellum organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010845">
        <property type="entry name" value="FlaF"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07309">
        <property type="entry name" value="FlaF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0966">Cell projection</keyword>
    <keyword evidence="1" id="KW-0969">Cilium</keyword>
    <keyword evidence="1" id="KW-0282">Flagellum</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ75002.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="116" mass="13306" checksum="B0C948959A808BA3" modified="2015-12-09" version="1">MYNLSYAEVMDDLCIDDRLNEHKAMCIIIAKLTAAHEKGVRSPEAVDALFYTRRVWGFFMENLADDANQLPDETRANLISVGIWVLKEAEALRQWEREDFSDIIEINSIIRDSLAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKQ4</accession>
    <name>A0A0M7AKQ4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04121</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75131.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04121"/>
    <dbReference type="EnsemblBacteria" id="CTQ75131">
        <property type="protein sequence ID" value="CTQ75131"/>
        <property type="gene ID" value="LAX5112_04121"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809426" evidence="1">
        <location>
            <begin position="25"/>
            <end position="147"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75131.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="147" mass="16292" checksum="46098A0DB70B67E5" modified="2015-12-09" version="1">MSFFRVARFALPVLALFGFMTATAAADEHRLYFSSERSNQLPGCDASSVQRAVQNTVSRAPSYFNGVRIVQLDKIRDTTYRSSISSAVTRRYCSGTASLSDGSRVAVKYLLEAHAGVFGISWNVETCLNHRDKWYVYGGSCRTLTAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKT7</accession>
    <name>A0A0M7AKT7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03992</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74830.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74830">
        <property type="protein sequence ID" value="CTQ74830"/>
        <property type="gene ID" value="LAX5112_03992"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ74830.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="69" mass="7532" checksum="58C8B449E8F241CD" modified="2015-12-09" version="1">MRIDSQGFPGKKSAVSNFVECEFPMTRLKADILDMMSEALASVTFMRGGTMTPAKTTVKHTTKTTKTTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKU3</accession>
    <name>A0A0M7AKU3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Outer membrane protein A</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_04134</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75171.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673393.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04134"/>
    <dbReference type="EnsemblBacteria" id="CTQ75171">
        <property type="protein sequence ID" value="CTQ75171"/>
        <property type="gene ID" value="LAX5112_04134"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011250">
        <property type="entry name" value="OMP/PagP_b-brl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027385">
        <property type="entry name" value="OMP_b-brl"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13505">
        <property type="entry name" value="OMP_b-brl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56925">
        <property type="entry name" value="SSF56925"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809417" evidence="1">
        <location>
            <begin position="21"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="domain" description="OMP_b-brl" evidence="2">
        <location>
            <begin position="34"/>
            <end position="221"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13505"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ75171.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="221" mass="22885" checksum="5AE83B0B91B52E8F" modified="2015-12-09" version="1">MNRLALAGFALTASAAGALAADLPQSPAPAPAYDAVPAGQQSIDWTGFYVGTQLGWAFGNFDNSTGGASSSFSNNGVGGGAYAGYNFQVTPNVVVGLESDFSLTDLEKSGTINGLSLKSSSDWNANFRGRLGYAFDRYMIYGAGGLAIADLEATANGVSDSKTALGWTLGAGAEAAITQNVVARFDYSYQDFGDQDFNLGGTGVSTEFNDHQVRAGIAYKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKU5</accession>
    <name>A0A0M7AKU5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">VHL domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_03802</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the VHL family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74224.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03802"/>
    <dbReference type="EnsemblBacteria" id="CTQ74224">
        <property type="protein sequence ID" value="CTQ74224"/>
        <property type="gene ID" value="LAX5112_03802"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd05468">
        <property type="entry name" value="pVHL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.780">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024053">
        <property type="entry name" value="VHL_beta_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037140">
        <property type="entry name" value="VHL_beta_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036208">
        <property type="entry name" value="VHL_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022772">
        <property type="entry name" value="VHL_tumour_suppress_b/a_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01847">
        <property type="entry name" value="VHL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49468">
        <property type="entry name" value="SSF49468"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="VHL" evidence="3">
        <location>
            <begin position="407"/>
            <end position="468"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="136"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="499"/>
            <end position="522"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="140"/>
            <end position="168"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010057"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01847"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ74224.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="609" mass="63915" checksum="3668D5BB160198E0" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AL16</accession>
    <name>A0A0M7AL16_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Molybdopterin synthase catalytic subunit</fullName>
            <ecNumber evidence="4">2.8.1.12</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10">MPT synthase subunit 2</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="8">Molybdenum cofactor biosynthesis protein E</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="9">Molybdopterin-converting factor large subunit</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="11">Molybdopterin-converting factor subunit 2</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="12" type="primary">moaE</name>
        <name evidence="12" type="ORF">LAX5112_04125</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Converts molybdopterin precursor Z into molybdopterin. This requires the incorporation of two sulfur atoms into precursor Z to generate a dithiolene group. The sulfur is provided by MoaD.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>2 [molybdopterin-synthase sulfur-carrier protein]-C-terminal Gly-NH-CH2-C(O)SH + cyclic pyranopterin phosphate + H2O = 2 [molybdopterin-synthase sulfur-carrier protein]-C-terminal Gly-Gly + 4 H(+) + molybdopterin</text>
            <dbReference type="Rhea" id="RHEA:26333"/>
            <dbReference type="Rhea" id="RHEA-COMP:12160"/>
            <dbReference type="Rhea" id="RHEA-COMP:12202"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:58698"/>
            <dbReference type="ChEBI" id="CHEBI:59648"/>
            <dbReference type="ChEBI" id="CHEBI:90619"/>
            <dbReference type="ChEBI" id="CHEBI:90778"/>
            <dbReference type="EC" id="2.8.1.12"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Cofactor biosynthesis; molybdopterin biosynthesis.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Heterotetramer of 2 MoaD subunits and 2 MoaE subunits. Also stable as homodimer. The enzyme changes between these two forms during catalysis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the MoaE family.</text>
    </comment>
    <dbReference type="EC" id="2.8.1.12" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75142.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008192233.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04125"/>
    <dbReference type="EnsemblBacteria" id="CTQ75142">
        <property type="protein sequence ID" value="CTQ75142"/>
        <property type="gene ID" value="LAX5112_04125"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00344"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030366">
        <property type="term" value="F:molybdopterin synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006777">
        <property type="term" value="P:Mo-molybdopterin cofactor biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00756">
        <property type="entry name" value="MoaE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1170.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036563">
        <property type="entry name" value="MoaE_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003448">
        <property type="entry name" value="Mopterin_biosynth_MoaE"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02391">
        <property type="entry name" value="MoaE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54690">
        <property type="entry name" value="SSF54690"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="12" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005046"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005426"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011950"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00013858"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00025448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00026066"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00029745"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00030407"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00030781"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00032474"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ75142.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="155" mass="17009" checksum="767EE341AFAC24CF" modified="2015-12-09" version="1">MAVEATVRVQAEDFSAQSEMDTLTAGRQDVGALVSFTGLCRNEAGTLAALELEHYPGMAEAELERIASDALKRWPLTGLTVVHRYGKIQPGEQIVLVVAASAHRRAAFEAADFLMDFLKTRAPFWKKEHFVSGKSETWVAAKADDDADAERWIAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AL98</accession>
    <name>A0A0M7AL98_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">tRNA-binding protein YgjH</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ygjH</name>
        <name evidence="5" type="ORF">LAX5112_04139</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75186.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673395.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04139"/>
    <dbReference type="EnsemblBacteria" id="CTQ75186">
        <property type="protein sequence ID" value="CTQ75186"/>
        <property type="gene ID" value="LAX5112_04139"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008231">
        <property type="entry name" value="CsaA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002547">
        <property type="entry name" value="tRNA-bd_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11586:SF37">
        <property type="entry name" value="PTHR11586:SF37"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01588">
        <property type="entry name" value="tRNA_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02222">
        <property type="entry name" value="chap_CsaA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50886">
        <property type="entry name" value="TRBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="1 3" id="KW-0820">tRNA-binding</keyword>
    <feature type="domain" description="TRNA-binding" evidence="4">
        <location>
            <begin position="9"/>
            <end position="113"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00209"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50886"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ75186.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="113" mass="12491" checksum="E5DCDF0F06D80C95" modified="2015-12-09" version="1">MSDQISFDDFLKVDVRVGRVVEAEEFPEARKPAYKLRIDFGPDIGIKKTSAQITKNYTTDTLVGRLVMAVVNFPPRQIGPVRSEVLTLGVPDADGEVVLMTPDKDVPIGGRLY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALA3</accession>
    <name>A0A0M7ALA3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ADP-ribose pyrophosphatase</fullName>
            <ecNumber evidence="2">3.6.1.13</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">nudF_1</name>
        <name evidence="2" type="ORF">LAX5112_04232</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.6.1.13" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75437.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673468.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000021.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04232"/>
    <dbReference type="EnsemblBacteria" id="CTQ75437">
        <property type="protein sequence ID" value="CTQ75437"/>
        <property type="gene ID" value="LAX5112_04232"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047631">
        <property type="term" value="F:ADP-ribose diphosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015797">
        <property type="entry name" value="NUDIX_hydrolase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000086">
        <property type="entry name" value="NUDIX_hydrolase_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00293">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55811">
        <property type="entry name" value="SSF55811"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51462">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nudix hydrolase" evidence="1">
        <location>
            <begin position="35"/>
            <end position="167"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51462"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75437.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="175" mass="19684" checksum="4129912BC1FE192A" modified="2015-12-09" version="1">MNKLSRKTVYKNRWMQVHEDAVRFPDGSEGIYGLVDKPDFALIIPRHDDGRFQLVEQYRYPVGGRYWEFPQGSWEGVQNADLEQVALGELEEETGFKAKSLTKLGHLFEAYGYSNQGFDVFLAEGLTPGEVNRENTEQDMATAAFTRAEITDLIRSGDIKDAPTVAALGLLSMSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALA7</accession>
    <name>A0A0M7ALA7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Major tail tube protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04404</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75905.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04404"/>
    <dbReference type="EnsemblBacteria" id="CTQ75905">
        <property type="protein sequence ID" value="CTQ75905"/>
        <property type="gene ID" value="LAX5112_04404"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006498">
        <property type="entry name" value="Tail_tube"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04985">
        <property type="entry name" value="Phage_tube"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ75905.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="172" mass="18989" checksum="2BFA26D045569508" modified="2015-12-09" version="1">MNPALTLTMMDVRLAERAGSSRPLKVSKITLPPVKFMTVNRNPGGGAMSVDTNMPRIEPLAPGFDTYGPDDEIFSVLGLTDRWTFGCSYKKHNTHEVIPARVIIEGVLNEWAMGDLDTGEAQIAAHVFTEVTHYEFSLNGVERFYADEEEIEIRKDGISLTAPHKRAAGLPT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALF8</accession>
    <name>A0A0M7ALF8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Alpha-E domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04340</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000022">
        <property type="protein sequence ID" value="CTQ75719.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673565.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000022.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04340"/>
    <dbReference type="EnsemblBacteria" id="CTQ75719">
        <property type="protein sequence ID" value="CTQ75719"/>
        <property type="gene ID" value="LAX5112_04340"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025841">
        <property type="entry name" value="CP_ATPgrasp_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007296">
        <property type="entry name" value="DUF403"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04168">
        <property type="entry name" value="Alpha-E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14403">
        <property type="entry name" value="CP_ATPgrasp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Alpha-E" evidence="1">
        <location>
            <begin position="517"/>
            <end position="797"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04168"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75719.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="798" mass="87736" checksum="C697D9EDE74FEAC9" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALT7</accession>
    <name>A0A0M7ALT7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Glutathione transport system permease protein GsiC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">gsiC_3</name>
        <name evidence="8" type="ORF">LAX5112_04307</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="6">Cell membrane</location>
            <topology evidence="6">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000022">
        <property type="protein sequence ID" value="CTQ75627.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04307"/>
    <dbReference type="EnsemblBacteria" id="CTQ75627">
        <property type="protein sequence ID" value="CTQ75627"/>
        <property type="gene ID" value="LAX5112_04307"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045621">
        <property type="entry name" value="BPD_transp_1_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19300">
        <property type="entry name" value="BPD_transp_1_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="101"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="146"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="241"/>
            <end position="263"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="291"/>
            <end position="313"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="7">
        <location>
            <begin position="101"/>
            <end position="306"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ75627.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="321" mass="34977" checksum="3CD65992DD34E80A" modified="2015-12-09" version="1">MPNRKSMLHYILKRLLSLSLSLVAASIVIFLALEVVPGDPAAYMLGLNAQEDTLQALREELGLTGSIFQRYLSWAGGLLVGDFGVSYTYRTPVSGMIGDRLWVSLPLALYALTLSTLIAFPAGIWAASRRGSAADASVMGVTQLGVAIPNFWFAMLMVLVFAINLRWFSAGGFPGWDAGFFAGMKALTLPAIALALPQASILTRVMRSSLLDTLGEDFIRTARAKGLTKGQALWRHAVRNALIPVLTILGLQFSFLLAGAIIIENVFFLPGLGRLVFQSISARDLIVVESVVMLLVFAVIVVNFAVDMAYAWVDPRLRRRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMB3</accession>
    <name>A0A0M7AMB3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">ABC transporter, substrate-binding protein, aliphatic sulfonates family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_04546</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000025">
        <property type="protein sequence ID" value="CTQ76278.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673734.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000025.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04546"/>
    <dbReference type="EnsemblBacteria" id="CTQ76278">
        <property type="protein sequence ID" value="CTQ76278"/>
        <property type="gene ID" value="LAX5112_04546"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015168">
        <property type="entry name" value="SsuA/THI5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006311">
        <property type="entry name" value="TAT_signal"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09084">
        <property type="entry name" value="NMT1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809539" evidence="1">
        <location>
            <begin position="29"/>
            <end position="340"/>
        </location>
    </feature>
    <feature type="domain" description="NMT1" evidence="2">
        <location>
            <begin position="41"/>
            <end position="250"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF09084"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ76278.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="340" mass="35732" checksum="E0EF31386D97CD20" modified="2015-12-09" version="1">MISMNRRKALTLLGAAAASTTLSAPAIASNKKIKVGALRFTSHSGSFVAYERGYFADAGLDVEFKFFQAAQPMAVAIASGDIDYAVTAVSGGLISLADKGAIKVIGGALSERKGVDGQKILASDAAFQGGLKTPADLGGKTFGITTAGSSFHYMGSTIAAKEGVDLKFKPLQKVGAIIGALKSGQIDAWSIVPHIAKPLSGSGAVHIIGNVVDYIPDYQVTTVFTSTKNAEDEKGMTTDFLTAFSRGVADYDADLVSKTNGDAGVNEMVDLIHKYVYTDRPREKAAPSIINGAMYLNEGAALNVTSIENQLAWFQSEDLVSKDVTLDTLVDPSYVEILKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMB8</accession>
    <name>A0A0M7AMB8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">3-keto-5-aminohexanoate cleavage enzyme</fullName>
            <ecNumber evidence="1">2.-.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">kce_4</name>
        <name evidence="1" type="ORF">LAX5112_04323</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.-.-.-" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000022">
        <property type="protein sequence ID" value="CTQ75671.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673545.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000022.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04323"/>
    <dbReference type="EnsemblBacteria" id="CTQ75671">
        <property type="protein sequence ID" value="CTQ75671"/>
        <property type="gene ID" value="LAX5112_04323"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019475">
        <property type="term" value="P:L-lysine catabolic process to acetate"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008567">
        <property type="entry name" value="KCE_family"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37418">
        <property type="entry name" value="PTHR37418"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05853">
        <property type="entry name" value="BKACE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ75671.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="303" mass="32194" checksum="045912D677A3426F" modified="2015-12-09" version="1">MPLQMNRDVFITCAVTGSGSTQDKSPHVPRSPKEIADSAIDAAKAGAAVVHCHVRDPETGVPSRRLDLYREVTDRIRSADVDVVLNLTAGMGGDIVFGSTEAPFPVNEAGTDMIGASERMAHIAECLPEICTLDCGTMNFAEADYVMTNTPGMLRAMGGMMTELGVKPEIEAFDTGHLWFAKQLVEEGTLTSPALVQLCMGVPWGAPNDLNTFMAMVNAVPQDWTWSAFSLGRDQMPYVAASVLAGGNVRVGLEDNLFLEKGVLATNAQLVEKAAGVIEGMGARVAGPDAVRESLGLTKRAPK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMI0</accession>
    <name>A0A0M7AMI0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Flagellar biosynthesis protein FliR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">LAX5112_04076</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the FliR/MopE/SpaR family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ74993.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04076"/>
    <dbReference type="EnsemblBacteria" id="CTQ74993">
        <property type="protein sequence ID" value="CTQ74993"/>
        <property type="gene ID" value="LAX5112_04076"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006605">
        <property type="term" value="P:protein targeting"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002010">
        <property type="entry name" value="T3SS_IM_R"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30065">
        <property type="entry name" value="PTHR30065"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01311">
        <property type="entry name" value="Bac_export_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00953">
        <property type="entry name" value="TYPE3IMRPROT"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8" id="KW-0966">Cell projection</keyword>
    <keyword evidence="8" id="KW-0969">Cilium</keyword>
    <keyword evidence="8" id="KW-0282">Flagellum</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="12"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="45"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="74"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="189"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="223"/>
            <end position="248"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009772"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ74993.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="258" mass="27826" checksum="08DE8B2212496930" modified="2015-12-09" version="1">MIAGGLLFSTYGSSLVLATFLLFCRIGACLMVIPGFGSNRIPMRVRLFVAFGISLALSPLLVPDIQQALPDEALGTVSFFIGAELLTGLFIGFLGRIFIAALETLTTLVSMAIGLSNMPGMPIDGVDALPPVANLFTLTATAMIFIADQHWEILRGLVQSYEVIPPGRPLAAMASLEQFAEQLARTFVLALRVVSPFIVYTIVVNLAVGLINKLTPQIPVYFISLPFVIAGGLYFLYLVAAEAIMIFLDGYFTWLQLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMN7</accession>
    <name>A0A0M7AMN7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 6">Flagellar basal-body rod protein FlgC</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">flgC_2</name>
        <name evidence="9" type="ORF">LAX5112_04100</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="5 6">The basal body constitutes a major portion of the flagellar organelle and consists of four rings (L,P,S, and M) mounted on a central rod. The rod consists of about 26 subunits of FlgG in the distal portion, and FlgB, FlgC and FlgF are thought to build up the proximal portion of the rod with about 6 subunits each.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 6">Bacterial flagellum basal body</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the flagella basal body rod proteins family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ75053.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673363.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04100"/>
    <dbReference type="EnsemblBacteria" id="CTQ75053">
        <property type="protein sequence ID" value="CTQ75053"/>
        <property type="gene ID" value="LAX5112_04100"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030694">
        <property type="term" value="C:bacterial-type flagellum basal body, rod"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071973">
        <property type="term" value="P:bacterial-type flagellum-dependent cell motility"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001444">
        <property type="entry name" value="Flag_bb_rod_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019776">
        <property type="entry name" value="Flagellar_basal_body_rod_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010930">
        <property type="entry name" value="Flg_bb/hook_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006299">
        <property type="entry name" value="FlgC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00460">
        <property type="entry name" value="Flg_bb_rod"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06429">
        <property type="entry name" value="Flg_bbr_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01395">
        <property type="entry name" value="FlgC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00588">
        <property type="entry name" value="FLAGELLA_BB_ROD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6" id="KW-0975">Bacterial flagellum</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Flg_bb_rod" evidence="7">
        <location>
            <begin position="9"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="domain" description="Flg_bbr_C" evidence="8">
        <location>
            <begin position="87"/>
            <end position="132"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009677"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00017941"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023143"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00025933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU362062"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00460"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF06429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ75053.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="138" mass="15279" checksum="FD8CCEB38ECE1BB6" modified="2015-12-09" version="1">MSDPLSATLQIAASGLKAQSDRMRIVSENLANARSTGEASGDDPYRRKTITFESEFNRATQANLVAVKGIGTDKAPFTVEYDPGHPAADVDGYVKMPNVNTLMELADMRETNRSYEANLKVMTQAREMVMRHIDLLRN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AN02</accession>
    <name>A0A0M7AN02_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Long-chain-fatty-acid--CoA ligase</fullName>
            <ecNumber evidence="4">6.2.1.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">lcfB_4</name>
        <name evidence="4" type="ORF">LAX5112_04444</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="6.2.1.3" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ76037.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673650.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000024.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04444"/>
    <dbReference type="EnsemblBacteria" id="CTQ76037">
        <property type="protein sequence ID" value="CTQ76037"/>
        <property type="gene ID" value="LAX5112_04444"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004467">
        <property type="term" value="F:long-chain fatty acid-CoA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12780">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025110">
        <property type="entry name" value="AMP-bd_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045851">
        <property type="entry name" value="AMP-bd_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020845">
        <property type="entry name" value="AMP-binding_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000873">
        <property type="entry name" value="AMP-dep_Synth/Lig"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042099">
        <property type="entry name" value="ANL_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00501">
        <property type="entry name" value="AMP-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13193">
        <property type="entry name" value="AMP-binding_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00455">
        <property type="entry name" value="AMP_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0007">Acetylation</keyword>
    <keyword evidence="4" id="KW-0436">Ligase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AMP-binding" evidence="2">
        <location>
            <begin position="13"/>
            <end position="408"/>
        </location>
    </feature>
    <feature type="domain" description="AMP-binding_C" evidence="3">
        <location>
            <begin position="417"/>
            <end position="492"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022990"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF13193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ76037.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="515" mass="56747" checksum="3C789388C8155107" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANH4</accession>
    <name>A0A0M7ANH4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Virulence-regulating protein VirS</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">virS_3</name>
        <name evidence="5" type="ORF">LAX5112_04669</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000028">
        <property type="protein sequence ID" value="CTQ76675.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673853.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000028.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04669"/>
    <dbReference type="EnsemblBacteria" id="CTQ76675">
        <property type="protein sequence ID" value="CTQ76675"/>
        <property type="gene ID" value="LAX5112_04669"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032687">
        <property type="entry name" value="AraC-type_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12625">
        <property type="entry name" value="Arabinose_bd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="4">
        <location>
            <begin position="219"/>
            <end position="317"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ76675.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="333" mass="37801" checksum="1D2C585250C9B151" modified="2015-12-09" version="1">MIRNCAGEEGIRRIERHIDVPRGTYDSPDSTVLYKDNYRFFALAADTLGHRSISLNMQSSDDARNLGLYGQYLLGAPDLSTGLRRTVSMPRLSPEFSYQTLELDGDFARFGYRCVYQGSKDWRHQADLMITYMIAMFLHFSGDISLLDRVELTYPRGAYVRDMEDRFGVPVLYEKGSDAIVFDRSALDRKPGKSNAAWTHLTARDVELEKLRYPAKLPDQIRLMINRRLLGRKTDLEGLALRLDTGPRTIQRKLAEVGTSYRELVERERKARAMCLLGEGVMTIDQVAVSLGYASRTQFIRAFKGWTGVTPRKQAVSAAMENEASFEISLSGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APK0</accession>
    <name>A0A0M7APK0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Alkanal monooxygenase alpha chain</fullName>
            <ecNumber evidence="2">1.14.14.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">luxA_2</name>
        <name evidence="2" type="ORF">LAX5112_04569</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.14.14.3" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000026">
        <property type="protein sequence ID" value="CTQ76362.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673763.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000026.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04569"/>
    <dbReference type="EnsemblBacteria" id="CTQ76362">
        <property type="protein sequence ID" value="CTQ76362"/>
        <property type="gene ID" value="LAX5112_04569"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047646">
        <property type="term" value="F:alkanal monooxygenase (FMN-linked) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011251">
        <property type="entry name" value="Luciferase-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036661">
        <property type="entry name" value="Luciferase-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00296">
        <property type="entry name" value="Bac_luciferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51679">
        <property type="entry name" value="SSF51679"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0503">Monooxygenase</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Bac_luciferase" evidence="1">
        <location>
            <begin position="1"/>
            <end position="313"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00296"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76362.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="344" mass="38789" checksum="195150F4D7FB72FE" modified="2015-12-09" version="1">MEFSLFAHMERLTPQQPHEILYEEFVSLCKLADEGGMRAIWTGEHHGMEFTIAPNPFLTLVDLAHHTKNARLGTGTVIAPFWHPIKLAGEAAAADLITGGRIELGIARGAYSYEYERLMPGLNPWEAGQRMRETAPLLRPLWQGDCAHDGGYYAFPPTTSAPKPLQENGPPIWIAARDPNSHEFGVHQGFNIQVTPLWQGMEEIETLMGRFNEACVSHHGPRPKIMLLHHSYVASDSDDAVLAAKELSRFYCYFGAWFQNKRAVSQGLIENLSEDELAANKMMAPENMARDLTIGTAQDVIDRIKRYEDLGYDEYSFWIDSGMSFERKQASLRRFIDDVMPAFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQS9</accession>
    <name>A0A0M7AQS9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Mycofactocin system glycosyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04926</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000035">
        <property type="protein sequence ID" value="CTQ77495.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674069.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000035.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04926"/>
    <dbReference type="EnsemblBacteria" id="CTQ77495">
        <property type="protein sequence ID" value="CTQ77495"/>
        <property type="gene ID" value="LAX5112_04926"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ77495.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="693" mass="76102" checksum="A41BB2ABF061C7CA" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQW4</accession>
    <name>A0A0M7AQW4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">4,5-dihydroxyphthalate decarboxylase</fullName>
            <ecNumber evidence="2">4.1.1.55</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">pht5</name>
        <name evidence="2" type="ORF">LAX5112_04942</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="4.1.1.55" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000036">
        <property type="protein sequence ID" value="CTQ77535.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77535">
        <property type="protein sequence ID" value="CTQ77535"/>
        <property type="gene ID" value="LAX5112_04942"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018796">
        <property type="term" value="F:4,5-dihydroxyphthalate decarboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015168">
        <property type="entry name" value="SsuA/THI5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006311">
        <property type="entry name" value="TAT_signal"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09084">
        <property type="entry name" value="NMT1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NMT1" evidence="1">
        <location>
            <begin position="116"/>
            <end position="181"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF09084"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77535.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="368" mass="40395" checksum="44CDCC9F3379F5FC" modified="2015-12-09" version="1">MFNRRQFIQAGGMALAAGQGLGCAGASAQSGQLPITVSSYLLDRTQALFDGSVAIGGTDAEFVQGAIGDMNTAAFTGTGRNEISELGLHPFMLAHANEGFRDYALLPVFLLRQFRHKSVFVRTGAGIQTPQDLAGKRIGTAGYSSTSLTWIRGIFEEEYGLRPQNVEWVISNADSSAAVAGAASAQESQIPADIIVTQGKPGLDESELLLSGEVDALFHAATPAAFVDGDTRIARLFPDFRSVEQAYFEKTGVFPIMHVLAIRRDTAAEHPWLAKAVFDAYAEAKFKAYRTKDRLTWATDMLPWYSQELDNTRLLMGRNFYPYGIEPNRTTLETLFRYSHEQGLADRLLTVEETFLPESLEFTEVTQP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AR82</accession>
    <name>A0A0M7AR82_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative integral membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04900</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000034">
        <property type="protein sequence ID" value="CTQ77409.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674043.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000034.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04900"/>
    <dbReference type="EnsemblBacteria" id="CTQ77409">
        <property type="protein sequence ID" value="CTQ77409"/>
        <property type="gene ID" value="LAX5112_04900"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="56"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="86"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="144"/>
            <end position="162"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77409.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="169" mass="18681" checksum="B1852EEAEA1C8DBD" modified="2015-12-09" version="1">MSTVFFCLIQFTILAYALVGGVFLAFSDFIMRSLALTRGHAGVEAMQVINREVFRWVFMALFLGMAAVSLVIAGYGAFWLSGPAGALIMMAGLVYLVGCFGVTVFFNVPMNKALAGMDISLDSTRDYWLRTYVPRWTFWNSVRTVACTVSAAMLLFGLPWMIQIQSQPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARH7</accession>
    <name>A0A0M7ARH7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Cyclic di-GMP phosphodiesterase Gmr</fullName>
            <ecNumber evidence="11">3.1.4.52</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">gmr_16</name>
        <name evidence="11" type="ORF">LAX5112_04725</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EC" id="3.1.4.52" evidence="11"/>
    <dbReference type="EMBL" id="CXWD01000029">
        <property type="protein sequence ID" value="CTQ76850.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673897.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000029.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04725"/>
    <dbReference type="EnsemblBacteria" id="CTQ76850">
        <property type="protein sequence ID" value="CTQ76850"/>
        <property type="gene ID" value="LAX5112_04725"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071111">
        <property type="term" value="F:cyclic-guanylate-specific phosphodiesterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01948">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01949">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00130">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.450">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001633">
        <property type="entry name" value="EAL_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035919">
        <property type="entry name" value="EAL_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000160">
        <property type="entry name" value="GGDEF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001610">
        <property type="entry name" value="PAC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000014">
        <property type="entry name" value="PAS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000700">
        <property type="entry name" value="PAS-assoc_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035965">
        <property type="entry name" value="PAS-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013655">
        <property type="entry name" value="PAS_fold_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011620">
        <property type="entry name" value="Sig_transdc_His_kinase_LytS_TM"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07694">
        <property type="entry name" value="5TM-5TMR_LYT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00563">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00990">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08447">
        <property type="entry name" value="PAS_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00052">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00267">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00086">
        <property type="entry name" value="PAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00091">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141868">
        <property type="entry name" value="SSF141868"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55785">
        <property type="entry name" value="SSF55785"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00254">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00229">
        <property type="entry name" value="sensory_box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50883">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50887">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50113">
        <property type="entry name" value="PAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50112">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="11" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="6"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="35"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="67"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="100"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="132"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="164"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="domain" description="PAC" evidence="8">
        <location>
            <begin position="275"/>
            <end position="327"/>
        </location>
    </feature>
    <feature type="domain" description="PAS" evidence="7">
        <location>
            <begin position="335"/>
            <end position="378"/>
        </location>
    </feature>
    <feature type="domain" description="GGDEF" evidence="10">
        <location>
            <begin position="492"/>
            <end position="624"/>
        </location>
    </feature>
    <feature type="domain" description="EAL" evidence="9">
        <location>
            <begin position="633"/>
            <end position="883"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50112"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50113"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ76850.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="892" mass="97256" checksum="00DB5CE160704BE7" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AS88</accession>
    <name>A0A0M7AS88_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Copper-exporting P-type ATPase A</fullName>
            <ecNumber evidence="2">3.6.3.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">copA_2</name>
        <name evidence="2" type="ORF">LAX5112_04809</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.6.3.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000031">
        <property type="protein sequence ID" value="CTQ77120.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673976.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000031.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04809"/>
    <dbReference type="EnsemblBacteria" id="CTQ77120">
        <property type="protein sequence ID" value="CTQ77120"/>
        <property type="gene ID" value="LAX5112_04809"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023299">
        <property type="entry name" value="ATPase_P-typ_cyto_dom_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81660">
        <property type="entry name" value="SSF81660"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="43"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="73"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="480"/>
            <end position="502"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77120.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="522" mass="54501" checksum="F28F23366F3DCE40" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASB6</accession>
    <name>A0A0M7ASB6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Arylsulfatase</fullName>
            <ecNumber evidence="6">3.1.6.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">atsA_6</name>
        <name evidence="6" type="ORF">LAX5112_04948</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="PTM">
        <text evidence="3">The conversion to 3-oxoalanine (also known as C-formylglycine, FGly), of a serine or cysteine residue in prokaryotes and of a cysteine residue in eukaryotes, is critical for catalytic activity.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the sulfatase family.</text>
    </comment>
    <dbReference type="EC" id="3.1.6.1" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000036">
        <property type="protein sequence ID" value="CTQ77547.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674093.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000036.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04948"/>
    <dbReference type="EnsemblBacteria" id="CTQ77547">
        <property type="protein sequence ID" value="CTQ77547"/>
        <property type="gene ID" value="LAX5112_04948"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004065">
        <property type="term" value="F:arylsulfatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017850">
        <property type="entry name" value="Alkaline_phosphatase_core_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024607">
        <property type="entry name" value="Sulfatase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000917">
        <property type="entry name" value="Sulfatase_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00884">
        <property type="entry name" value="Sulfatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53649">
        <property type="entry name" value="SSF53649"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00149">
        <property type="entry name" value="SULFATASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809578" evidence="4">
        <location>
            <begin position="22"/>
            <end position="556"/>
        </location>
    </feature>
    <feature type="domain" description="Sulfatase" evidence="5">
        <location>
            <begin position="66"/>
            <end position="416"/>
        </location>
    </feature>
    <feature type="modified residue" description="3-oxoalanine (Cys)" evidence="3">
        <location>
            <position position="116"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008779"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR600917-51"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ77547.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="556" mass="61960" checksum="EA14E832FC23F2D0" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AUD4</accession>
    <name>A0A0M7AUD4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Malonyl-CoA O-methyltransferase BioC</fullName>
            <ecNumber evidence="2">2.1.1.197</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">bioC</name>
        <name evidence="2" type="ORF">LAX5112_04835</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.1.1.197" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000032">
        <property type="protein sequence ID" value="CTQ77204.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04835"/>
    <dbReference type="EnsemblBacteria" id="CTQ77204">
        <property type="protein sequence ID" value="CTQ77204"/>
        <property type="gene ID" value="LAX5112_04835"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102130">
        <property type="term" value="F:malonyl-CoA methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013216">
        <property type="entry name" value="Methyltransf_11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08241">
        <property type="entry name" value="Methyltransf_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Methyltransf_11" evidence="1">
        <location>
            <begin position="87"/>
            <end position="140"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08241"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77204.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="298" mass="32498" checksum="7879CD4131C8686C" modified="2015-12-09" version="1">MTAQPELFDRELLRMRRRTALVNANPGSDFLLKAVAEDLGERLSAITRTFETAIDLGGHCGHVEALLQATGKVKTLYRADLWQPDPQLTAPAFVADDAVLPLKDQSVDLIVSALSLQFVNDLPGTLIQIRRALRPDGLFLATLAGAGTLTELRDCLTRAELELKGGAAARVLPFADTRDLGGLMQRAGFALPVTDMDPLTVRYNSMFDLMADLKAMGAINILRERSRTPLPKTVFLRAAELYSQDYADSDGRVRATFNMVTLLGWAPHSSQQKPLKPGSAQTRLADALGTEEVGLKQD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AUN7</accession>
    <name>A0A0M7AUN7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Endo-1,3-1,4-beta-glycanase ExsH</fullName>
            <ecNumber evidence="1">3.2.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">exsH</name>
        <name evidence="1" type="ORF">LAX5112_04929</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.2.1.-" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000035">
        <property type="protein sequence ID" value="CTQ77503.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674072.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000035.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77503">
        <property type="protein sequence ID" value="CTQ77503"/>
        <property type="gene ID" value="LAX5112_04929"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016798">
        <property type="term" value="F:hydrolase activity, acting on glycosyl bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008152">
        <property type="term" value="P:metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.150.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018511">
        <property type="entry name" value="Hemolysin-typ_Ca-bd_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001343">
        <property type="entry name" value="Hemolysn_Ca-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011049">
        <property type="entry name" value="Serralysin-like_metalloprot_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00353">
        <property type="entry name" value="HemolysinCabind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51120">
        <property type="entry name" value="SSF51120"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00330">
        <property type="entry name" value="HEMOLYSIN_CALCIUM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ77503.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="258" mass="27288" checksum="DB7EDC19EF036FBF" modified="2015-12-09" version="1">MDTLELVQRLFDADHYLQSNPDAVQSGLEAWQHFVLIGLGEGRDPGPFFNASYYLAQNPDVAAAGVSALTHFLEHGLYEGRVPTDLFDAEYYLAENPDVAASSMTPFFHFIRHGMEEGRAPMAVEEAASDTASGEAASELDAVLLLLGTDGADQLIGGNNDDVLVGRAGNDTLIGGDGQDIFGFGAGFGQDTIQDFNVSEDILRMTSLGIGSYEDLISLADVAVTGNDTSIAFSDGSSVTLIGVSDPSAIEFMPLPLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZM44</accession>
    <name>A0A0M6ZM44_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">NAD-dependent protein deacetylase</fullName>
            <ecNumber evidence="4">3.5.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">cobB_1</name>
        <name evidence="4" type="ORF">LAX5112_00080</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.5.1.-" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63828.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670127.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00080"/>
    <dbReference type="EnsemblBacteria" id="CTQ63828">
        <property type="protein sequence ID" value="CTQ63828"/>
        <property type="gene ID" value="LAX5112_00080"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070403">
        <property type="term" value="F:NAD+ binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1600.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029035">
        <property type="entry name" value="DHS-like_NAD/FAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003000">
        <property type="entry name" value="Sirtuin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026591">
        <property type="entry name" value="Sirtuin_cat_small_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026590">
        <property type="entry name" value="Ssirtuin_cat_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02146">
        <property type="entry name" value="SIR2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52467">
        <property type="entry name" value="SSF52467"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50305">
        <property type="entry name" value="SIRTUIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0520">NAD</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Deacetylase sirtuin-type" evidence="3">
        <location>
            <begin position="11"/>
            <end position="256"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50305"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ63828.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="256" mass="27234" checksum="D36CA0040DDFA478" modified="2015-12-09" version="1">MKIITELAEAQEYVSSFAEMPTGSIVALTGAGISTDSGIPDFRSPGGIWSQRAPVQYQDFLAFEESRLEDWDRRFEMQAFFSAAEPNPAHLALSSLSEKGQLSTLITQNVDGLHQRSGVSADKLIELHGNSTYATCLECGREAALDNQKAAVEAGGSPRCTACGGLLKAAVISFGQTMPEKEMERAVDACQSCDIFLVLGSSLVVHPAAQLPVIAASSGADLVILNREETPIDSIAKAILRTPLAATFANFPMKPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZM93</accession>
    <name>A0A0M6ZM93_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Cystathionine beta-lyase MetC</fullName>
            <ecNumber evidence="6">4.4.1.8</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">metC_1</name>
        <name evidence="6" type="ORF">LAX5112_00101</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>H2O + L,L-cystathionine = L-homocysteine + NH4(+) + pyruvate</text>
            <dbReference type="Rhea" id="RHEA:13965"/>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="ChEBI" id="CHEBI:58161"/>
            <dbReference type="ChEBI" id="CHEBI:58199"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 5">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="3 5">Belongs to the trans-sulfuration enzymes family.</text>
    </comment>
    <dbReference type="EC" id="4.4.1.8" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63879.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670138.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00101"/>
    <dbReference type="EnsemblBacteria" id="CTQ63879">
        <property type="protein sequence ID" value="CTQ63879"/>
        <property type="gene ID" value="LAX5112_00101"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004121">
        <property type="term" value="F:cystathionine beta-lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019346">
        <property type="term" value="P:transsulfuration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000277">
        <property type="entry name" value="Cys/Met-Metab_PyrdxlP-dep_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006233">
        <property type="entry name" value="Cys_b_lyase_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43500">
        <property type="entry name" value="PTHR43500"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01053">
        <property type="entry name" value="Cys_Met_Meta_PP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001434">
        <property type="entry name" value="CGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01324">
        <property type="entry name" value="cysta_beta_ly_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00868">
        <property type="entry name" value="CYS_MET_METAB_PP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0456">Lyase</keyword>
    <keyword evidence="4 5" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="modified residue" description="N6-(pyridoxal phosphate)lysine" evidence="4">
        <location>
            <position position="208"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001535"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009077"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR001434-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU362118"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ63879.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="391" mass="41942" checksum="0120EC8EC5C60622" modified="2015-12-09" version="1">MTNTPDNKRSIETVLAHSGRDPSGFHGFVNPPVVHASTVLYPDTKTMVTGAQKFSYARRGNPTTDSLEDALKEIEGAAGVKLANSGLNAIALAILSCVKSGDHILIADTAYGPTRHFADTVLPGLNVDVEYYNPAVGANIKSLFKPNTTAVFTEAPGSLTFEMQDIPAIAAAAHEIDATVLMDNTWASPLYCQPIAFGVDLSIQAGTKYIVGHSDVMLGTIAASEKAWHKLDTLHGAMGSHVGPDDVYLGLRGLRTLSVRLERHQKNTAVVLDWLKTQPAIGAIRYPALESDPGHEIWKRDFSGASGLCGFDFATGTTQEQAYAFLDALTLFGLGYSWGGFESLAIPVRLKGMRSATNVDPDLHSVRLHIGLEDPEDLIRDLGQALDKAFA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZNB4</accession>
    <name>A0A0M6ZNB4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">AIG2-like family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00231</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64248.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670226.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00231"/>
    <dbReference type="EnsemblBacteria" id="CTQ64248">
        <property type="protein sequence ID" value="CTQ64248"/>
        <property type="gene ID" value="LAX5112_00231"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd06661">
        <property type="entry name" value="GGCT_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009288">
        <property type="entry name" value="AIG2-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013024">
        <property type="entry name" value="GGCT-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036568">
        <property type="entry name" value="GGCT-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06094">
        <property type="entry name" value="GGACT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF110857">
        <property type="entry name" value="SSF110857"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GGACT" evidence="1">
        <location>
            <begin position="12"/>
            <end position="113"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF06094"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64248.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="117" mass="12732" checksum="91764194C7555F22" modified="2015-12-09" version="1">MVRFAAEHRLATYGTLAPGRVNHHHVENVQGSWTTGVIRGRLIEAGWGAGLGYPGLIADPNGDSIEVHVLVSIDLINHWDRLDAFEGAGYQRVSIDVETPEGQVLASIYVIATETEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZP49</accession>
    <name>A0A0M6ZP49_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Putative glutamine ABC transporter permease protein GlnM</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">glnM_1</name>
        <name evidence="10" type="ORF">LAX5112_00105</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="8">Cell membrane</location>
            <topology evidence="8">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63890.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040450609.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00105"/>
    <dbReference type="EnsemblBacteria" id="CTQ63890">
        <property type="protein sequence ID" value="CTQ63890"/>
        <property type="gene ID" value="LAX5112_00105"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006865">
        <property type="term" value="P:amino acid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010065">
        <property type="entry name" value="AA_ABC_transptr_permease_3TM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043429">
        <property type="entry name" value="ArtM/GltK/GlnP/TcyL/YhdX-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30614">
        <property type="entry name" value="PTHR30614"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01726">
        <property type="entry name" value="HEQRo_perm_3TM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0029">Amino-acid transport</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="8" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="26"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="56"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="88"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="128"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="187"/>
            <end position="207"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="219"/>
            <end position="238"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="273"/>
            <end position="292"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="346"/>
            <end position="364"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="370"/>
            <end position="395"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="9">
        <location>
            <begin position="92"/>
            <end position="392"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ63890.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="404" mass="44422" checksum="182739CEA60F1C9F" modified="2015-12-09" version="1">MSVMEQDSAGAPARASLVNDPKVRGLFYQALLIAALIFFGYFIVTNTVANLERQNIASGWGFVENTAGFGIIQSLVPYAETSSYGQAIFVGFLNTLMVAVVGIFFATIIGFVVGIARLSNNWVINQIAYCYVELVRNVPLLLQIFFWYFAVLRAVPGKREKWSLFDTFHLNIAGLRMPKPIWEDGSGFIGIALIIGIVASVVVSRWARKRQDETGQQFPVFWTALGLIIGLPVITYFVTGMPMYLEHPNYVETGPILRRGFELGVGFNLIPEFLALTTALAIYTAAFIAEIVRAGIQAVSHGQTEASHALGLRNGPTLRLVVIPQAMRVIIPPLTSQYLNLTKNSSLAVAIAFPDLVSVGGTVLNQTGQAIEIIAIWMAVYLSLSLITSAFMNWYNQRMALVER</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="33" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPU3</accession>
    <name>A0A0M6ZPU3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="15">Bifunctional protein GlmU</fullName>
        </recommendedName>
        <domain>
            <recommendedName>
                <fullName evidence="15">UDP-N-acetylglucosamine pyrophosphorylase</fullName>
                <ecNumber evidence="15">2.7.7.23</ecNumber>
            </recommendedName>
            <alternativeName>
                <fullName evidence="15">N-acetylglucosamine-1-phosphate uridyltransferase</fullName>
            </alternativeName>
        </domain>
        <domain>
            <recommendedName>
                <fullName evidence="15">Glucosamine-1-phosphate N-acetyltransferase</fullName>
                <ecNumber evidence="15">2.3.1.157</ecNumber>
            </recommendedName>
        </domain>
    </protein>
    <gene>
        <name evidence="15 17" type="primary">glmU</name>
        <name evidence="17" type="ORF">LAX5112_00213</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="18" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="18">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="15">Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="15">
            <text>H(+) + N-acetyl-alpha-D-glucosamine 1-phosphate + UTP = diphosphate + UDP-N-acetyl-alpha-D-glucosamine</text>
            <dbReference type="Rhea" id="RHEA:13509"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:46398"/>
            <dbReference type="ChEBI" id="CHEBI:57705"/>
            <dbReference type="ChEBI" id="CHEBI:57776"/>
            <dbReference type="EC" id="2.7.7.23"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="15">
            <text>acetyl-CoA + alpha-D-glucosamine 1-phosphate = CoA + H(+) + N-acetyl-alpha-D-glucosamine 1-phosphate</text>
            <dbReference type="Rhea" id="RHEA:13725"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57288"/>
            <dbReference type="ChEBI" id="CHEBI:57776"/>
            <dbReference type="ChEBI" id="CHEBI:58516"/>
            <dbReference type="EC" id="2.3.1.157"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="15">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="15">Binds 1 Mg(2+) ion per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="15">Bacterial outer membrane biogenesis; LPS lipid A biosynthesis.</text>
    </comment>
    <comment type="pathway">
        <text evidence="15">Nucleotide-sugar biosynthesis; UDP-N-acetyl-alpha-D-glucosamine biosynthesis; N-acetyl-alpha-D-glucosamine 1-phosphate from alpha-D-glucosamine 6-phosphate (route II): step 2/2.</text>
    </comment>
    <comment type="pathway">
        <text evidence="15">Nucleotide-sugar biosynthesis; UDP-N-acetyl-alpha-D-glucosamine biosynthesis; UDP-N-acetyl-alpha-D-glucosamine from N-acetyl-alpha-D-glucosamine 1-phosphate: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="15">Homotrimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 15">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 15">In the C-terminal section; belongs to the transferase hexapeptide repeat family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 15">In the N-terminal section; belongs to the N-acetylglucosamine-1-phosphate uridyltransferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="15">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.23" evidence="15"/>
    <dbReference type="EC" id="2.3.1.157" evidence="15"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64196.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670212.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00213"/>
    <dbReference type="EnsemblBacteria" id="CTQ64196">
        <property type="protein sequence ID" value="CTQ64196"/>
        <property type="gene ID" value="LAX5112_00213"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00113">
        <property type="reaction ID" value="UER00532"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00973"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019134">
        <property type="term" value="F:glucosamine-1-phosphate N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003977">
        <property type="term" value="F:UDP-N-acetylglucosamine diphosphorylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000902">
        <property type="term" value="P:cell morphogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009245">
        <property type="term" value="P:lipid A biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
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        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008360">
        <property type="term" value="P:regulation of cell shape"/>
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        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006048">
        <property type="term" value="P:UDP-N-acetylglucosamine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd03353">
        <property type="entry name" value="LbH_GlmU_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01631">
        <property type="entry name" value="GlmU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005882">
        <property type="entry name" value="Bifunctional_GlmU"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038009">
        <property type="entry name" value="GlmU_C_LbH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001451">
        <property type="entry name" value="Hexapep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018357">
        <property type="entry name" value="Hexapep_transf_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025877">
        <property type="entry name" value="MobA-like_NTP_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011004">
        <property type="entry name" value="Trimer_LpxA-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00132">
        <property type="entry name" value="Hexapep"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14602">
        <property type="entry name" value="Hexapep_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12804">
        <property type="entry name" value="NTP_transf_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51161">
        <property type="entry name" value="SSF51161"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01173">
        <property type="entry name" value="glmU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00101">
        <property type="entry name" value="HEXAPEP_TRANSFERASES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="13 15" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="10 15" id="KW-0133">Cell shape</keyword>
    <keyword evidence="14 15" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="4 15" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="9 15" id="KW-0460">Magnesium</keyword>
    <keyword evidence="7 15" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12 15" id="KW-0511">Multifunctional enzyme</keyword>
    <keyword evidence="6 15" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="11 15" id="KW-0573">Peptidoglycan synthesis</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 15" id="KW-0677">Repeat</keyword>
    <keyword evidence="5 15" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="NTP_transf_3" evidence="16">
        <location>
            <begin position="9"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="region of interest" description="Pyrophosphorylase" evidence="15">
        <location>
            <begin position="1"/>
            <end position="232"/>
        </location>
    </feature>
    <feature type="region of interest" description="UDP-GlcNAc binding" evidence="15">
        <location>
            <begin position="11"/>
            <end position="14"/>
        </location>
    </feature>
    <feature type="region of interest" description="UDP-GlcNAc binding" evidence="15">
        <location>
            <begin position="83"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="region of interest" description="Linker" evidence="15">
        <location>
            <begin position="233"/>
            <end position="253"/>
        </location>
    </feature>
    <feature type="region of interest" description="N-acetyltransferase" evidence="15">
        <location>
            <begin position="254"/>
            <end position="451"/>
        </location>
    </feature>
    <feature type="region of interest" description="Acetyl-CoA binding" evidence="15">
        <location>
            <begin position="372"/>
            <end position="373"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="15">
        <location>
            <position position="349"/>
        </location>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="25"/>
        </location>
        <ligand>
            <name>UDP-N-acetyl-alpha-D-glucosamine</name>
            <dbReference type="ChEBI" id="CHEBI:57705"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="78"/>
        </location>
        <ligand>
            <name>UDP-N-acetyl-alpha-D-glucosamine</name>
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        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="108"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="144"/>
        </location>
        <ligand>
            <name>UDP-N-acetyl-alpha-D-glucosamine</name>
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        <location>
            <position position="158"/>
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        <ligand>
            <name>UDP-N-acetyl-alpha-D-glucosamine</name>
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        </ligand>
    </feature>
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        <location>
            <position position="173"/>
        </location>
        <ligand>
            <name>UDP-N-acetyl-alpha-D-glucosamine</name>
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        </ligand>
    </feature>
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        <location>
            <position position="230"/>
        </location>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="319"/>
        </location>
        <ligand>
            <name>UDP-N-acetyl-alpha-D-glucosamine</name>
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        </ligand>
    </feature>
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        <location>
            <position position="337"/>
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        <ligand>
            <name>UDP-N-acetyl-alpha-D-glucosamine</name>
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        </ligand>
    </feature>
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        <location>
            <position position="352"/>
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        <ligand>
            <name>UDP-N-acetyl-alpha-D-glucosamine</name>
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        </ligand>
    </feature>
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        <location>
            <position position="363"/>
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        <ligand>
            <name>UDP-N-acetyl-alpha-D-glucosamine</name>
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        </ligand>
    </feature>
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        <location>
            <position position="366"/>
        </location>
        <ligand>
            <name>acetyl-CoA</name>
            <dbReference type="ChEBI" id="CHEBI:57288"/>
        </ligand>
    </feature>
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        <location>
            <position position="391"/>
        </location>
        <ligand>
            <name>acetyl-CoA</name>
            <dbReference type="ChEBI" id="CHEBI:57288"/>
        </ligand>
    </feature>
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        <location>
            <position position="409"/>
        </location>
        <ligand>
            <name>acetyl-CoA</name>
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        </ligand>
    </feature>
    <feature type="binding site" evidence="15">
        <location>
            <position position="426"/>
        </location>
        <ligand>
            <name>acetyl-CoA</name>
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        </ligand>
    </feature>
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        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
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        <source>
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        <source>
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        <source>
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    </evidence>
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        <source>
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        <source>
            <dbReference type="ARBA" id="ARBA00022984"/>
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        <source>
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        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
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    </evidence>
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    </evidence>
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        <source>
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        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="CTQ64196.1"/>
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    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="451" mass="46988" checksum="08E6F04990148C41" modified="2015-12-09" version="1">MTLRSCHSVVLAAGLGTRMKSDLPKVMHPVGGLPIVGHVLKVLGQTGSSRLSVVTGPGMPELEELVGDLAPDARCFVQADRLGTAHAALAAEEALENVTDDVLVLFGDTPLVTAVTVEKVRGALAGGADVVVLGFETDTPFGYGRLLMDDGRLVAIREEKDASDFERKITFCNSGIMGFAGEKALGILQAIGNDNAKGEYYLTDAVEVANAKGLKVVAVAGTEAETQGINTRAQLAACEADFQASRREQILESGVTLLAPETVFFAHDTVIEPDVIIEQNVVFGPGVTVRSGAQIRAFSHLEGADVGNGAVVGPYARLRPGTVLGKDVRVGNFVEAKNAVFGDGAKANHLSYVGDARVGEASNIGAGTITCNYDGFLKHHTDIGAGTFVGSNSTLVAPVTLGDGAFVAAGSVITRDVAGDAMAFGRTRQQSKDGMAKVLRDKLKKAKDQKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQA2</accession>
    <name>A0A0M6ZQA2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Leucine/isoleucine/valine transporter permease subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_00452</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64935.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00452"/>
    <dbReference type="EnsemblBacteria" id="CTQ64935">
        <property type="protein sequence ID" value="CTQ64935"/>
        <property type="gene ID" value="LAX5112_00452"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015658">
        <property type="term" value="F:branched-chain amino acid transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06581">
        <property type="entry name" value="TM_PBP1_LivM_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001851">
        <property type="entry name" value="ABC_transp_permease"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043428">
        <property type="entry name" value="LivM-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30482">
        <property type="entry name" value="PTHR30482"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02653">
        <property type="entry name" value="BPD_transp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="6"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
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            <begin position="34"/>
            <end position="55"/>
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            <end position="163"/>
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    <feature type="transmembrane region" description="Helical" evidence="6">
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            <end position="220"/>
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            <begin position="226"/>
            <end position="244"/>
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    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="251"/>
            <end position="271"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="277"/>
            <end position="297"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
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        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ64935.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="326" mass="34537" checksum="DCE52AF3B30BD8A5" modified="2015-12-09" version="1">MIGVISYLVFFSTVAAILAIAVLGLNLQWGNTGLFNGGVVASFGAGAYGTLILGGTPQDGHLGGFDLFYPLALLGGMIFAGVLAWVVGKLTLRLRHDYLAIATFGVAVAFENVMRNATAVTGGAQGIRGFERPLQSLIGSGFTYNLVFLIAVLICLVLVYVFLERLTVSPFGRLLRAIREDETAARSLGKSPDKVRLAAFVTGSVIIGLAGSLYGTFYAFVSPQDVLPILTFQIWAMLIVGGAGNNKGAMAGAFLIWGSWTFSGWALSRFAPVEVQLYTGSIQFVLIGMVIVGMLLWRPQGLFPERLVVSQPGGGSRGKTQAEGLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQP1</accession>
    <name>A0A0M6ZQP1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00294</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64430.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670271.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00294"/>
    <dbReference type="EnsemblBacteria" id="CTQ64430">
        <property type="protein sequence ID" value="CTQ64430"/>
        <property type="gene ID" value="LAX5112_00294"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027304">
        <property type="entry name" value="Trigger_fact/SurA_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF109998">
        <property type="entry name" value="SSF109998"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ64430.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="292" mass="33002" checksum="DCFF7A55B0005A56" modified="2015-12-09" version="1">MTSKASAEKPQEGEQPEVSLLRRFLREPLLHFLLLAAGLFVAQGMISGDERELIVVDAEAQKYLFSQEEDLRLRPLTESDKQRIVDTFIEEEILVREAKARGFTDSSRVRALLVQNMRFFIGSDVPEPTEDELRAHFEGNLDTFTSPPSLDLNHVMFSDPDTVPDGILDALNQAEDPSALGVLDTRLGYRLRFLDQRRLVGLFGVEPAKDLLAVTEDDREWRGPYASPAGSIHFLRVINRNPPRTPTYELAKDWISTHWLSAKSNDLLDAALDDMRQNYVVVVEPVEGGRND</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZS93</accession>
    <name>A0A0M6ZS93_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">N-acetylmuramic acid 6-phosphate etherase</fullName>
            <ecNumber evidence="3">4.2.1.126</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">murQ</name>
        <name evidence="3" type="ORF">LAX5112_00708</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="4.2.1.126" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65649.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00708"/>
    <dbReference type="EnsemblBacteria" id="CTQ65649">
        <property type="protein sequence ID" value="CTQ65649"/>
        <property type="gene ID" value="LAX5112_00708"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0097367">
        <property type="term" value="F:carbohydrate derivative binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016835">
        <property type="term" value="F:carbon-oxygen lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046348">
        <property type="term" value="P:amino sugar catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd05007">
        <property type="entry name" value="SIS_Etherase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005488">
        <property type="entry name" value="Etherase_MurQ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040190">
        <property type="entry name" value="MURQ/GCKR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001347">
        <property type="entry name" value="SIS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046348">
        <property type="entry name" value="SIS_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10088">
        <property type="entry name" value="PTHR10088"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10088:SF5">
        <property type="entry name" value="PTHR10088:SF5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13580">
        <property type="entry name" value="SIS_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53697">
        <property type="entry name" value="SSF53697"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51464">
        <property type="entry name" value="SIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 3" id="KW-0456">Lyase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SIS" evidence="2">
        <location>
            <begin position="83"/>
            <end position="244"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ65649.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="342" mass="35642" checksum="DCD5BE3336E72CDE" modified="2015-12-09" version="1">MALLTHPLILINIWTNGIIKVLYRKFTEDRVPEATTEKLHNLASGLDSRPSEDIAAILIDGQVSAAQATSTAKEVITAAAYDMANSIRTDGALYYVAAGSSGLMAAADAMELGGTFGIPEHQVQILMAGGIPTSAHMPGDTEDATASLATDLAKLSKKDTIIVVSASGSTPFTLEAARLGKEAGTTVIAIANNPDAPLFALSKHAIYLPTAPEVVSGSTRMGAGTAQKIALNALSTLMALNLGHIYDGMMVNLRADNIKLRDRAERMVATITGASDGDAAGALKTADGNIKTACLLAAGASSIEHAISLLENARGHLRPALEQIWAETRKNKPFLQTEGKAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSJ6</accession>
    <name>A0A0M6ZSJ6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Protein-disulfide isomerase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00321</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64504.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008195497.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00321"/>
    <dbReference type="EnsemblBacteria" id="CTQ64504">
        <property type="protein sequence ID" value="CTQ64504"/>
        <property type="gene ID" value="LAX5112_00321"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001853">
        <property type="entry name" value="DSBA-like_thioredoxin_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01323">
        <property type="entry name" value="DSBA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0413">Isomerase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DSBA" evidence="1">
        <location>
            <begin position="8"/>
            <end position="205"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01323"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64504.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="224" mass="24783" checksum="D43EA674620E2DCD" modified="2015-12-09" version="1">MNSTPAITIDIVSDVMCPWCYIGKRRLEAALKQVPDIPVEVRWHPFQLDATLPKTGKDRQQYLSDKFGGMERANAFYSQIKAAGTEEGIPFDFDAIKLSPNTLDCHRLILWSRADDVQDDVVERLFKAYFVDGEDLTKSELLVRISEEAGMQSDLVEQLLETETDLDKIIAQIGKAQESGVTGVPCFIIDGRFVLAGAEKAETIAAGIMHADATRTDVEAETAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZT42</accession>
    <name>A0A0M6ZT42_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Phasin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00369</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64694.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008194226.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00369"/>
    <dbReference type="EnsemblBacteria" id="CTQ64694">
        <property type="protein sequence ID" value="CTQ64694"/>
        <property type="gene ID" value="LAX5112_00369"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018968">
        <property type="entry name" value="Phasin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010127">
        <property type="entry name" value="Phasin_subfam-1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09361">
        <property type="entry name" value="Phasin_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01841">
        <property type="entry name" value="phasin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Phasin_2" evidence="1">
        <location>
            <begin position="61"/>
            <end position="158"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF09361"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64694.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="169" mass="18428" checksum="E251FD63CFD6A967" modified="2015-12-09" version="1">MTDTTTATKTASKARTTKAKAAPAAAFPDFEAFAMPKMEVPAAFREATEKSIESARDTYAKVKTAAEDATDLMEDTFETSRQGVVEFNHKAVDAAKVNADAAFTFMKDIMSVKTLAEAIELQSTFARQQFDSLSTQSKEMQELATKLGTDVSAPVKEAMEKSFKDMKVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTU1</accession>
    <name>A0A0M6ZTU1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">HTH-type transcriptional regulator MhqR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">mhqR_2</name>
        <name evidence="2" type="ORF">LAX5112_00702</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65631.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670641.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00702"/>
    <dbReference type="EnsemblBacteria" id="CTQ65631">
        <property type="protein sequence ID" value="CTQ65631"/>
        <property type="gene ID" value="LAX5112_00702"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000835">
        <property type="entry name" value="HTH_MarR-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01047">
        <property type="entry name" value="MarR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00347">
        <property type="entry name" value="HTH_MARR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50995">
        <property type="entry name" value="HTH_MARR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH marR-type" evidence="1">
        <location>
            <begin position="6"/>
            <end position="138"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65631.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="162" mass="17986" checksum="BE0791CA75A911E0" modified="2015-12-09" version="1">MNANEAAQIFKSIRRIVRAIDLRSREVARASGLTIPQIVVLQGVNDLGEVTTKVLSDHADLSSATVVTILDKLEEKKLVERYRSPSDRRIVHTMLTERGKETVASLPGLLHDEFEAKFDKLTDKNKIRLVESISEIAEMLNAHKLDAAPILTTGQVTNEITS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="31" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZU69</accession>
    <name>A0A0M6ZU69_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Transcriptional regulatory protein ZraR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">zraR_1</name>
        <name evidence="9" type="ORF">LAX5112_00473</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64993.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670425.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00473"/>
    <dbReference type="EnsemblBacteria" id="CTQ64993">
        <property type="protein sequence ID" value="CTQ64993"/>
        <property type="gene ID" value="LAX5112_00473"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002197">
        <property type="entry name" value="HTH_Fis"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002078">
        <property type="entry name" value="Sigma_54_int"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025944">
        <property type="entry name" value="Sigma_54_int_dom_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02954">
        <property type="entry name" value="HTH_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00158">
        <property type="entry name" value="Sigma54_activat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01590">
        <property type="entry name" value="HTHFIS"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00688">
        <property type="entry name" value="SIGMA54_INTERACT_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50045">
        <property type="entry name" value="SIGMA54_INTERACT_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0804">Transcription</keyword>
    <keyword evidence="4" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="3" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="domain" description="Response regulatory" evidence="8">
        <location>
            <begin position="4"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="domain" description="Sigma-54 factor interaction" evidence="7">
        <location>
            <begin position="132"/>
            <end position="361"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="6">
        <location>
            <position position="53"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50045"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ64993.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="458" mass="49930" checksum="20C72C267A578E26" modified="2015-12-09" version="1">MSELILLVEDDPVLGPSLQQRLVLEGFSVVHATTLAAAREFLGKRVPSFVLSDIRLPDGSGADLLREVLSQHGAVPIVYMTAYGSVDQAVELVRDGARDYLAKPFNLDELVSRIQELLLRPLAPQVDDPFSTFGLSASMRGVRSMLNRLAGIDLPVLLIGETGTGKEIAARYLHAKNAAQSRPFEALNCGQLSPELADSTLFGHEKGAFTSAHDRRIGVLESVGEGTLLLDEIGDTGPELQLKLLRVLQERQFRRLGASQDLAFKGRLVCATNRDLEEAVRDGVFREDLLFRINVVTIRVPPLRERLEEVAPLITAFAANAAQRMGIAPKPATAAAVSAAEQHDWPGNVRELRNRVERAVALAGGAELTPADLFPENATRLLQPASHASGGPATAQSRSSIGFPSLAEVRDQAERTHILRALDETDGRLQDAAKLLHISRTTLWERMRRHGIDRSTES</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUY4</accession>
    <name>A0A0M6ZUY4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Biotin biosynthesis cytochrome P450</fullName>
            <ecNumber evidence="3">1.14.15.12</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">bioI</name>
        <name evidence="3" type="ORF">LAX5112_01021</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the cytochrome P450 family.</text>
    </comment>
    <dbReference type="EC" id="1.14.15.12" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66585.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671211.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01021"/>
    <dbReference type="EnsemblBacteria" id="CTQ66585">
        <property type="protein sequence ID" value="CTQ66585"/>
        <property type="gene ID" value="LAX5112_01021"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004497">
        <property type="term" value="F:monooxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016705">
        <property type="term" value="F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.630.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001128">
        <property type="entry name" value="Cyt_P450"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002397">
        <property type="entry name" value="Cyt_P450_B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017972">
        <property type="entry name" value="Cyt_P450_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036396">
        <property type="entry name" value="Cyt_P450_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00067">
        <property type="entry name" value="p450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00359">
        <property type="entry name" value="BP450"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48264">
        <property type="entry name" value="SSF48264"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00086">
        <property type="entry name" value="CYTOCHROME_P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0349">Heme</keyword>
    <keyword evidence="2" id="KW-0408">Iron</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2" id="KW-0503">Monooxygenase</keyword>
    <keyword evidence="2 3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU000461"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ66585.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="411" mass="47375" checksum="43DAAF67F16D9440" modified="2015-12-09" version="1">MSHTSDLEFNPLSDAFAQDPHPFYEALRAKEGLTYYEDFDVWLAARFDDVSEIVMSEHMVRSMEHIASAEEIEKQKRDGNWHDMPHHSRFVQFSLLDSDGDVHDRLRKQVFKLFTPVMVNKLRDEIQAYVDSLVDGLADHAEIDFIEDLAAHVPGHIIGRILGVPDADCPQLRIWSENIVQYFDIDRSDKRKELAERNTTEFYHYLSDLKRQRATAPKDDLISMMIEAQKAGQMNEDEFISTAMLILMAGHGSTIDVLGSGMHALLKFPDQMQQLRDDQSLMKTAVQEMFRYESPLPFFHRYVTQEMEVCGQRFERGTKFGVLYGSANRDPKQFPNADTFDVGRSPNWHIAFGRGAHFCLGNHLARLDMDIIFSTLLRRFSRIELAAEDVRYKRGLSVRGPDALKIHWSPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVC1</accession>
    <name>A0A0M6ZVC1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">NAD-reducing hydrogenase HoxS subunit beta</fullName>
            <ecNumber evidence="5">1.12.1.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">hoxH</name>
        <name evidence="5" type="ORF">LAX5112_00892</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Ni(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:49786"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 4">Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.</text>
    </comment>
    <dbReference type="EC" id="1.12.1.2" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66162.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670782.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00892"/>
    <dbReference type="EnsemblBacteria" id="CTQ66162">
        <property type="protein sequence ID" value="CTQ66162"/>
        <property type="gene ID" value="LAX5112_00892"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008901">
        <property type="term" value="F:ferredoxin hydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047985">
        <property type="term" value="F:hydrogen dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016151">
        <property type="term" value="F:nickel cation binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.645.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001501">
        <property type="entry name" value="Ni-dep_hyd_lsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018194">
        <property type="entry name" value="Ni-dep_hyd_lsu_Ni_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029014">
        <property type="entry name" value="NiFe-Hase_large"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00374">
        <property type="entry name" value="NiFeSe_Hases"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56762">
        <property type="entry name" value="SSF56762"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00507">
        <property type="entry name" value="NI_HGENASE_L_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00508">
        <property type="entry name" value="NI_HGENASE_L_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0371">Homeobox</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-0533">Nickel</keyword>
    <keyword evidence="3 4 5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009292"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003896"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ66162.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="480" mass="53919" checksum="B5A87A730A8ECD0E" modified="2015-12-09" version="1">MGEPRLIEISPVTRVEGHGKVTIHLNSENEVDEARLHIVEFRGFERFIRGRLMWEVPVIVQRLCGICPVSHHLAAAKAMDMIAGVDQLTSTAEKMRRLMHYGQVMQSHVLHFFHLAAPDLLFGFGAPAEKRNIFEVIKEQPELGKRAVLMRKYGQEIIEATAGKKIHGTGAIPGGINRNLPIERRDHFLSSIDEMLAWAQDAVKLARDYTLEHEDLVAEFGSFPSNYMSLVREEDGALDLYHGNLRALSSTGDVIFDQLPYPQYHERLIEDVRSWSYMKFPFIKELGPEVGWYRVGPLARMNTASFIDTPIADAAHKELKAVTDGHPNNSTLANHWARMIEVVHCVEKIRELLNDPDLQGNDLVMTGERRGEGIGVIEAPRGNLIHHYQVDENDQVTYCNLIVSTTHNNEGMNRAVKDVAVKHLSGHDQITEGMLNHVEVAIRAYDPCLSCATHALGQMPLQVELFNAEGELVDSKAQSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVF1</accession>
    <name>A0A0M6ZVF1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Extracytoplasmic solute receptor protein</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">TRAP transporter</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">LAX5112_00848</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Part of the tripartite ATP-independent periplasmic (TRAP) transport system.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the bacterial solute-binding protein 7 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66040.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670750.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00848"/>
    <dbReference type="EnsemblBacteria" id="CTQ66040">
        <property type="protein sequence ID" value="CTQ66040"/>
        <property type="gene ID" value="LAX5112_00848"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031317">
        <property type="term" value="C:tripartite ATP-independent periplasmic transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071702">
        <property type="term" value="P:organic substance transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.190.170">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018389">
        <property type="entry name" value="DctP_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026289">
        <property type="entry name" value="SBP_TakP-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006311">
        <property type="entry name" value="TAT_signal"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038404">
        <property type="entry name" value="TRAP_DctP_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33376">
        <property type="entry name" value="PTHR33376"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03480">
        <property type="entry name" value="DctP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF039026">
        <property type="entry name" value="SiaP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3" id="KW-0574">Periplasm</keyword>
    <keyword evidence="6" id="KW-0675">Receptor</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="binding site" evidence="4 5">
        <location>
            <position position="156"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="177"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="214"/>
        </location>
        <ligand>
            <name>a metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:25213"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="240"/>
        </location>
        <ligand>
            <name>a metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:25213"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRNR" id="PIRNR039026"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR039026-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR039026-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ66040.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="365" mass="39450" checksum="52E52E22C5A5D0BF" modified="2015-12-09" version="1">MKRRDFLKAGAIGATGAAATTLAAPAIAQDVRQWRMVTAWPKNLPGPGVAAQMLADRITTLSSGRIEVKLFAAGEIVPGNGVFDAVGQGTAELYHAVPAYWGSKSKGILLFGSQPFGLTAPEQAGWLIHGGGQALYDEMYGRFNLKPFLCGNSGPQWAGWFRNEINSVDDLKGLKFRSTGLASEMCSKLGMAVQAMSGPAMFQALQSGALDAGEFIGPWTDSALGYYQIAKNYYWPGVGEPSSAEECAVNLDAYNELPDDLKEVVTQACSSLYNDVLTEYNTKHAQALTGLVNDHGVMVRKLPDDVIVAMGNAAGEVIADLRADSDDLVKQITESFLGYRKLMREYMPYADNGQMNARLLDYKYD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVN3</accession>
    <name>A0A0M6ZVN3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">sn-glycerol-3-phosphate-binding periplasmic protein UgpB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">ugpB_1</name>
        <name evidence="8" type="ORF">LAX5112_00932</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the bacterial solute-binding protein 1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66272.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670812.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00932"/>
    <dbReference type="EnsemblBacteria" id="CTQ66272">
        <property type="protein sequence ID" value="CTQ66272"/>
        <property type="gene ID" value="LAX5112_00932"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006059">
        <property type="entry name" value="SBP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13416">
        <property type="entry name" value="SBP_bac_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-0574">Periplasm</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="7">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809317" evidence="7">
        <location>
            <begin position="24"/>
            <end position="427"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="6">
        <location>
            <begin position="368"/>
            <end position="427"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008520"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ66272.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="427" mass="46677" checksum="EEEB9FC079F75992" modified="2015-12-09" version="1">MLKSTFLKAVAATALTFSTWASAQAVDLQFYFPVAVGGKAADTIQELTAEYVAQNPDVNIDAVYAGSYQDTVAKAITASRGGNPPQLSVILSVDMYTLIDEDLIVPFDDYLTSEDDKKWLEGFYPAFMENSQTGGKTYGIPFQRSTPVLYWNKEAFKEAGLDPEVAPETWEEMVEFGKTLTKKDASGNATQWGVRIPSSGFPYWLFQGLAIANGAELVNADGNKTNFDDPKVVEALQYLVDLSTKHEVMAPGIIEWGATPKAFFEGQTAMMWTSTGNLTNVRDNAPFDFGVAMLPAKVTRGAPTGGGNFYLFKGASDEQNKAAVEFVQWITAPEQSAKWTIATGYVAPRAETWETEEMKAYTADFAPALVARDQLEFAKAELSTYQNQRVTGIFNDALAAVITGQKDAETALKEAQAQADEILAEYR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXH4</accession>
    <name>A0A0M6ZXH4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">C4-dicarboxylate-binding periplasmic protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">dctP_3</name>
        <name evidence="4" type="ORF">LAX5112_01172</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the bacterial solute-binding protein 7 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66997.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671017.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01172"/>
    <dbReference type="EnsemblBacteria" id="CTQ66997">
        <property type="protein sequence ID" value="CTQ66997"/>
        <property type="gene ID" value="LAX5112_01172"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071702">
        <property type="term" value="P:organic substance transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.190.170">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018389">
        <property type="entry name" value="DctP_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038404">
        <property type="entry name" value="TRAP_DctP_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33376">
        <property type="entry name" value="PTHR33376"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03480">
        <property type="entry name" value="DctP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809133" evidence="3">
        <location>
            <begin position="22"/>
            <end position="355"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ66997.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="355" mass="38417" checksum="F1D619CD7F2014BA" modified="2015-12-09" version="1">MKVLKSLLAGAVLATGLSASAAVAETTIFYGHAGPARGTIPTALEWFNNRIGELSGGDMKLDIQFGGALFKANASANAIGFGVADAGSIISAYFQKEMAAYSIADLPISGPNVWVGLKATDKLMRTTPEITKQLADKNLVYIGTFTASDVNVACTGGEIASVKDIEDKRIRGAGVYGKVFGQMGATMVNLSVYEAYQALNNGLIDCSQGYTYIIPALKWHEVIDSFTVLNWGQIGGFGMFMNKQSFDALSEDQQSIMLQTGEELADEFAQIVMSRNAKALEAMKAGEFERDIKVLELSVEDRAAMNAATQPFIEEWKENANSVGFDADKLMAAYTEAVADYTKEFEERGYPWERN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXY3</accession>
    <name>A0A0M6ZXY3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Putative L,D-transpeptidase ErfK/SrfK</fullName>
            <ecNumber evidence="5">2.-.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">erfK_2</name>
        <name evidence="5" type="ORF">LAX5112_01428</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Cell wall biogenesis; peptidoglycan biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the YkuD family.</text>
    </comment>
    <dbReference type="EC" id="2.-.-.-" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67549.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671257.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01428"/>
    <dbReference type="EnsemblBacteria" id="CTQ67549">
        <property type="protein sequence ID" value="CTQ67549"/>
        <property type="gene ID" value="LAX5112_01428"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00219"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071972">
        <property type="term" value="F:peptidoglycan L,D-transpeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd16913">
        <property type="entry name" value="YkuD_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.440.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005490">
        <property type="entry name" value="LD_TPept_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038063">
        <property type="entry name" value="Transpep_catalytic_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03734">
        <property type="entry name" value="YkuD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141523">
        <property type="entry name" value="SSF141523"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="YkuD" evidence="4">
        <location>
            <begin position="84"/>
            <end position="218"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004752"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF03734"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ67549.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="220" mass="24697" checksum="AC56C0BB3CF3ED26" modified="2015-12-09" version="1">MALKFTRRSFVIGLPLVLAACQSKKSATVEAGLTPFSDGTPNYSLAYAGVRDGGFDLPPIDYLTFDPKYLRQTVFYPTSHPVGTIVVDPNNKFLYLIQPGGRAIRYGIGVGRAGFAWNGEAVIRFKREWPKWFPPDEMIERDPDLERYRDGQEGGPRNPIGARGLYLWQGNKDTLYRIHSTNQPRSIGTNASSGCIRMWHQDIIDLYDRVELGTKVIVLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYL2</accession>
    <name>A0A0M6ZYL2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">K(+)-insensitive pyrophosphate-energized proton pump</fullName>
            <ecNumber evidence="9">7.1.3.1</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">Membrane-bound proton-translocating pyrophosphatase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="9">Pyrophosphate-energized inorganic pyrophosphatase</fullName>
            <shortName evidence="9">H(+)-PPase</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9 11" type="primary">hppA</name>
        <name evidence="11" type="ORF">LAX5112_01031</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>diphosphate + H(+)(in) + H2O = 2 H(+)(out) + 2 phosphate</text>
            <dbReference type="Rhea" id="RHEA:13973"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="EC" id="7.1.3.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="9">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="9">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cell membrane</location>
            <topology evidence="9">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the H(+)-translocating pyrophosphatase (TC 3.A.10) family. K(+)-insensitive subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="7.1.3.1" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66613.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670921.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01031"/>
    <dbReference type="EnsemblBacteria" id="CTQ66613">
        <property type="protein sequence ID" value="CTQ66613"/>
        <property type="gene ID" value="LAX5112_01031"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004427">
        <property type="term" value="F:inorganic diphosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009678">
        <property type="term" value="F:pyrophosphate hydrolysis-driven proton transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01129">
        <property type="entry name" value="PPase_energized_pump"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004131">
        <property type="entry name" value="PPase-energised_H-pump"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31998">
        <property type="entry name" value="PTHR31998"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03030">
        <property type="entry name" value="H_PPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001265">
        <property type="entry name" value="H+-PPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01104">
        <property type="entry name" value="V_PPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="9" id="KW-0375">Hydrogen ion transport</keyword>
    <keyword evidence="11" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7 9" id="KW-0406">Ion transport</keyword>
    <keyword evidence="4 9" id="KW-0460">Magnesium</keyword>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 9" id="KW-1278">Translocase</keyword>
    <keyword evidence="3 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2 9" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="54"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="79"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="119"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="158"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="235"/>
            <end position="253"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="260"/>
            <end position="280"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="292"/>
            <end position="317"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="329"/>
            <end position="351"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="378"/>
            <end position="401"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="408"/>
            <end position="429"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="473"/>
            <end position="493"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="590"/>
            <end position="611"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="617"/>
            <end position="640"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="660"/>
            <end position="681"/>
        </location>
    </feature>
    <feature type="site" description="Determinant of potassium independence" evidence="9">
        <location>
            <position position="467"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01129"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ66613.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="712" mass="72741" checksum="C4D19015B82EFFD0" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYZ2</accession>
    <name>A0A0M6ZYZ2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Peptidoglycan glycosyltransferase</fullName>
            <ecNumber evidence="4">2.4.1.129</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="primary">pbpF</name>
        <name evidence="14" type="ORF">LAX5112_01076</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>[GlcNAc-(1-&gt;4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)](n)-di-trans,octa-cis-undecaprenyl diphosphate + beta-D-GlcNAc-(1-&gt;4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)-di-trans,octa-cis-undecaprenyl diphosphate = [GlcNAc-(1-&gt;4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)](n+1)-di-trans-octa-cis-undecaprenyl diphosphate + di-trans,octa-cis-undecaprenyl diphosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:23708"/>
            <dbReference type="Rhea" id="RHEA-COMP:9602"/>
            <dbReference type="Rhea" id="RHEA-COMP:9603"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:58405"/>
            <dbReference type="ChEBI" id="CHEBI:60033"/>
            <dbReference type="ChEBI" id="CHEBI:78435"/>
            <dbReference type="EC" id="2.4.1.129"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1">Cell wall biogenesis; peptidoglycan biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">In the C-terminal section; belongs to the transpeptidase family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">In the N-terminal section; belongs to the glycosyltransferase 51 family.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.129" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66743.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670949.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01076"/>
    <dbReference type="EnsemblBacteria" id="CTQ66743">
        <property type="protein sequence ID" value="CTQ66743"/>
        <property type="gene ID" value="LAX5112_01076"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00219"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004180">
        <property type="term" value="F:carboxypeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008658">
        <property type="term" value="F:penicillin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008955">
        <property type="term" value="F:peptidoglycan glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3810.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.710.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012338">
        <property type="entry name" value="Beta-lactam/transpept-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001264">
        <property type="entry name" value="Glyco_trans_51"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023346">
        <property type="entry name" value="Lysozyme-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011815">
        <property type="entry name" value="PBP_1c"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009647">
        <property type="entry name" value="PBP_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036950">
        <property type="entry name" value="PBP_transglycosylase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001460">
        <property type="entry name" value="PCN-bd_Tpept"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06832">
        <property type="entry name" value="BiPBP_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00912">
        <property type="entry name" value="Transgly"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00905">
        <property type="entry name" value="Transpeptidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53955">
        <property type="entry name" value="SSF53955"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56601">
        <property type="entry name" value="SSF56601"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02073">
        <property type="entry name" value="PBP_1c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0121">Carboxypeptidase</keyword>
    <keyword evidence="7" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="9" id="KW-0511">Multifunctional enzyme</keyword>
    <keyword evidence="6" id="KW-0645">Protease</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Transgly" evidence="12">
        <location>
            <begin position="60"/>
            <end position="231"/>
        </location>
    </feature>
    <feature type="domain" description="Transpeptidase" evidence="11">
        <location>
            <begin position="309"/>
            <end position="538"/>
        </location>
    </feature>
    <feature type="domain" description="BiPBP_C" evidence="13">
        <location>
            <begin position="612"/>
            <end position="697"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004752"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007739"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022645"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023268"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023988"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF00905"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF00912"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF06832"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="CTQ66743.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="708" mass="76876" checksum="5FA7C4775BF5A038" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZ03</accession>
    <name>A0A0M6ZZ03_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Periplasmic serine endoprotease DegP-like</fullName>
            <ecNumber evidence="5">3.4.21.107</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">degP1_2</name>
        <name evidence="7" type="ORF">LAX5112_01616</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 5">
            <text>Acts on substrates that are at least partially unfolded. The cleavage site P1 residue is normally between a pair of hydrophobic residues, such as Val-|-Val.</text>
            <dbReference type="EC" id="3.4.21.107"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the peptidase S1C family.</text>
    </comment>
    <dbReference type="EC" id="3.4.21.107" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68048.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01616"/>
    <dbReference type="EnsemblBacteria" id="CTQ68048">
        <property type="protein sequence ID" value="CTQ68048"/>
        <property type="gene ID" value="LAX5112_01616"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004252">
        <property type="term" value="F:serine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.42.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001478">
        <property type="entry name" value="PDZ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036034">
        <property type="entry name" value="PDZ_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011782">
        <property type="entry name" value="Pept_S1C_Do"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009003">
        <property type="entry name" value="Peptidase_S1_PA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001940">
        <property type="entry name" value="Peptidase_S1C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13180">
        <property type="entry name" value="PDZ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00834">
        <property type="entry name" value="PROTEASES2C"/>
    </dbReference>
    <dbReference type="SMART" id="SM00228">
        <property type="entry name" value="PDZ"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50156">
        <property type="entry name" value="SSF50156"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50494">
        <property type="entry name" value="SSF50494"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02037">
        <property type="entry name" value="degP_htrA_DO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50106">
        <property type="entry name" value="PDZ"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5 7" id="KW-0645">Protease</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <keyword evidence="5" id="KW-0720">Serine protease</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="5" id="KW-0346">Stress response</keyword>
    <feature type="domain" description="PDZ" evidence="6">
        <location>
            <begin position="272"/>
            <end position="363"/>
        </location>
    </feature>
    <feature type="domain" description="PDZ" evidence="6">
        <location>
            <begin position="369"/>
            <end position="483"/>
        </location>
    </feature>
    <feature type="active site" description="Charge relay system" evidence="4">
        <location>
            <position position="124"/>
        </location>
    </feature>
    <feature type="active site" description="Charge relay system" evidence="4">
        <location>
            <position position="154"/>
        </location>
    </feature>
    <feature type="active site" description="Charge relay system" evidence="4">
        <location>
            <position position="228"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001772"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR611782-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU364067"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50106"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ68048.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="497" mass="52844" checksum="4BED319716AB4EBD" modified="2015-12-09" version="1">MALKLLRQGMPRVVCATAGIMLGGLIAVTPFQGSHAHDGHGPESVADLAENLADAVVNISTAQTVQGQRSVPMPQVPEGSPFQEFFEEFFNRQNRDDDQPRRVQSLGSGFVLDGEAGIIITNNHVIDGADEVTANFNDGTKLRAEVIGTDEKTDIAVLKVEPETPLKEVSFGDSDGIRVGDWVMAIGNPFGLGGTVTVGIVSARNRDINAGPYDNFIQTDASINRGNSGGPLFDMDGNVIGINTAIISPSGGSIGIGFAIPAKTAIRVIDQLREFGETRRGWLGVRIQEVTDEIAESLGMDDAIGALVAGVTDDGPAAKGNIEAGDVIIKFDGKTVESMRELPRMVAETAIGKEVDVVVLRKGEEVTIRVTLERLEENQVAEASAPAEQEPDQPAETSKVLGMTLAELDDALRQQFSIEEDVTGVVVTEVEAGSSAEEKRVMAGDVIKEVAQEGVSTPADVEAEIQKLKDDGRRSALLLLANPTGDVRFVPVRIEDN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZ68</accession>
    <name>A0A0M6ZZ68_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ORF6N domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01107</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66824.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670971.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01107"/>
    <dbReference type="EnsemblBacteria" id="CTQ66824">
        <property type="protein sequence ID" value="CTQ66824"/>
        <property type="gene ID" value="LAX5112_01107"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018873">
        <property type="entry name" value="KilA-N_DNA-bd_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10543">
        <property type="entry name" value="ORF6N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ORF6N" evidence="1">
        <location>
            <begin position="15"/>
            <end position="98"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF10543"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66824.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="267" mass="28991" checksum="D60EBFDC9C2E9205" modified="2015-12-09" version="1">MAAPSPELTKLEPPQIFEIRDQAVVLDEDLARLFGLSTSKFNQRVKAHLERFEGGFAFQLTESEAEILIYQSGTSSGHGGRRKLPWVFTEHGAAMAATIIRTPEAVEATRFIIKTFVAARKAGVSPVPNAKAVTAKTGKLPAPAKERASLLVKLDGALGRVLDAIADPTADTTVRDEARAIALEGLNAVKSHLRKQGVQNEKTLAEIQKLLKEAEAIDAEVTAKHIENDHRRLAYLAKQLRIVIEVQRYMDSGSVDGLLAVLKDLGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZT1</accession>
    <name>A0A0M6ZZT1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Lipoprotein NlpI</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_01479</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67682.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671292.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01479"/>
    <dbReference type="EnsemblBacteria" id="CTQ67682">
        <property type="protein sequence ID" value="CTQ67682"/>
        <property type="gene ID" value="LAX5112_01479"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042802">
        <property type="term" value="F:identical protein binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011717">
        <property type="entry name" value="TPR-4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_repeat"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07721">
        <property type="entry name" value="TPR_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13181">
        <property type="entry name" value="TPR_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00028">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="8"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="SSF48452"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50005">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0802">TPR repeat</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809052" evidence="3">
        <location>
            <begin position="37"/>
            <end position="597"/>
        </location>
    </feature>
    <feature type="repeat" description="TPR" evidence="1">
        <location>
            <begin position="498"/>
            <end position="531"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="578"/>
            <end position="597"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00339"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ67682.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="597" mass="65571" checksum="27AE19049216E22F" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZX8</accession>
    <name>A0A0M6ZZX8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Neu5Ac permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">siaT_12</name>
        <name evidence="5" type="ORF">LAX5112_01552</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67871.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008191667.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01552"/>
    <dbReference type="EnsemblBacteria" id="CTQ67871">
        <property type="protein sequence ID" value="CTQ67871"/>
        <property type="gene ID" value="LAX5112_01552"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010656">
        <property type="entry name" value="DctM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004681">
        <property type="entry name" value="TRAP_DctM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33362">
        <property type="entry name" value="PTHR33362"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06808">
        <property type="entry name" value="DctM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006066">
        <property type="entry name" value="HI0050"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00786">
        <property type="entry name" value="dctM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="12"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="63"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="103"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="144"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="183"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="226"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="254"/>
            <end position="272"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="284"/>
            <end position="306"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="326"/>
            <end position="343"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="348"/>
            <end position="370"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="376"/>
            <end position="404"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="424"/>
            <end position="445"/>
        </location>
    </feature>
    <feature type="domain" description="DctM" evidence="4">
        <location>
            <begin position="15"/>
            <end position="441"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF06808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ67871.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="451" mass="48051" checksum="43A7C72A137355C6" modified="2015-12-09" version="1">MGLEIGIEWLTLIMFGSLLVLLMAGLPLAFVTGGLACVFLFILGDERALNIVPSRIFPLMTNYQLSAIPLFIFMASMLERAGIINDMFDVIYKVLGGVKGGLAAATIIASTILAAMVGVIGAAVVTMGIIALPAMLKRHYDPKIAMGSIMAGGTLGILIPPSILAIIYAVVAEQSVGELFIGAVVPGLLLSGMYILYVIISCTISPEKGPPIPEEERIPFKEKMRLMSGMSAPIALIAIVLGVIFTGVATPVEAAGIGTFGAIIVAAIHRNLDWQTLREASLTTLKASAMVIWIMFGATIFVGLYVLEGGQQFVQGALEATGLGPWGILILMQVVLVILGMFLDWVGILLLCVPIFVPIVKALGAAAFGLDNPDDLVLWFGVLYLVNMQMSFLSPPFGYALFYLRGVAPPDIPMTDIFKSALPFLALQIIGLVLCMMFPGIITWLPNLVYG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0A5</accession>
    <name>A0A0M7A0A5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01276</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67224.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67224">
        <property type="protein sequence ID" value="CTQ67224"/>
        <property type="gene ID" value="LAX5112_01276"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67224.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="57" mass="6553" checksum="61FAC47BA08547FB" modified="2015-12-09" version="1">MEKLASILLDLKWAELDEFAAHIRDVAIDDNGDQNDVRWVAGSLIDWAKEHHPEVQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0Q4</accession>
    <name>A0A0M7A0Q4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Lac repressor</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">LAX5112_01373</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67403.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671178.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01373"/>
    <dbReference type="EnsemblBacteria" id="CTQ67403">
        <property type="protein sequence ID" value="CTQ67403"/>
        <property type="gene ID" value="LAX5112_01373"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01392">
        <property type="entry name" value="HTH_LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000843">
        <property type="entry name" value="HTH_LacI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025997">
        <property type="entry name" value="SBP_2_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00356">
        <property type="entry name" value="LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13407">
        <property type="entry name" value="Peripla_BP_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00354">
        <property type="entry name" value="HTH_LACI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50932">
        <property type="entry name" value="HTH_LACI_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH lacI-type" evidence="4">
        <location>
            <begin position="8"/>
            <end position="46"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ67403.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="341" mass="37653" checksum="B7890BDD8DBA3323" modified="2015-12-09" version="1">MTHRFPVKEIALQSGLSTATVDRVLNNRAHVSPQTRRRVEDAVEELIRQEGQLAARGRRVFIEVLVEAPKRFSREIQRASEAVLSEFKPIALRPRFHVFETLSPQDCALELERIGRRGSQGVCLKARDTGLVRAAINALTDRGIPVVTVFTDNPGSRRLAYAGLNNIRAGQTAAYLMHNWLPDDAEAVLTTLSQHSFQGEEHRYEGFSKQLRALRPSIQLLDASGGGGHNPATGKEVAEQVVTQRRIDGVYSMGGGNRAILTALGDMGIQPSTFIAHDLDEDNLELLAQSRLSVVLYHDLKCDMRAAFRQCLAFHGLAEAPSQLESDIQIVTPMNLPADYA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0Z2</accession>
    <name>A0A0M7A0Z2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01402</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67464.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67464">
        <property type="protein sequence ID" value="CTQ67464"/>
        <property type="gene ID" value="LAX5112_01402"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="30"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="339"/>
            <end position="439"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="361"/>
            <end position="383"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ67464.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="439" mass="45009" checksum="34C413C20C09D7E4" modified="2015-12-09" version="1">MRPATGNRHPQGARLHAVARVNAVLAGRKVSIACLVVVTAAILGLSVYYSWPVDRSIFVSARTQSIAIRPSTPFEWVFSDVALCMAGGPPPPTRPAIAGSAAQTADADSVRDLSCGPATPVSSGPATLVTSAGSELELRRIGLGPLELRSDTGGVQLLFDGDVVSLTPEAGVVVDSLSFANGPALPFRGTAAIGVPVGAQGGAALLDGTYELREALGTRQRPELVGSGTLQAGDAVAIVEGLRSDATPRADVKGFLAPVDADQAGFRAVVSAFRPAAKEDGLRLEIARHGFAPTEIAPSWKDRVLADAFTYALVAIATVGLTGLTLLSQLRDLLRRPPGVAKNETAGTGNDAPASRMIGARGTATTGSQPEPAMTTASPHETPADWQSVRAGDAGPADTPKVMPADPSATVPRKAGEQTASTGDVSVPAHQPRPRSENA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1S4</accession>
    <name>A0A0M7A1S4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01944</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68945.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ68945">
        <property type="protein sequence ID" value="CTQ68945"/>
        <property type="gene ID" value="LAX5112_01944"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ68945.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="170" mass="18886" checksum="4D5EB90BADB130DC" modified="2015-12-09" version="1">MNGRRQAVCKGCARFEFKRAFHPMTVATTFSTLTVPPANQPPSASKSQFDMAEIKVELARRYEDWKALPEDQKLPYLKLEKHGLSEQDLDSLPEAERAQFEQKIAEASRQPVFAPSSDESTSRSALLKPVVSLASVLAISNAPHADAGDPARTRQDAIHLVNSIDIDRER</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1V7</accession>
    <name>A0A0M7A1V7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">HTH-type transcriptional regulator MhqR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">mhqR_3</name>
        <name evidence="2" type="ORF">LAX5112_01898</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68819.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ68819">
        <property type="protein sequence ID" value="CTQ68819"/>
        <property type="gene ID" value="LAX5112_01898"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000835">
        <property type="entry name" value="HTH_MarR-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12802">
        <property type="entry name" value="MarR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00598">
        <property type="entry name" value="HTHMARR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00347">
        <property type="entry name" value="HTH_MARR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50995">
        <property type="entry name" value="HTH_MARR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH marR-type" evidence="1">
        <location>
            <begin position="47"/>
            <end position="183"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68819.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="191" mass="21250" checksum="4563034FF91F2590" modified="2015-12-09" version="1">MSKLPSSRSKNPDHMFGDPEELLMDRAERARQQWQKEVPEIADKLTPMVVLGRINEASQMMTADYLTPAYAKIGLKLGEFDVLATLVRSGPPYKLTPTELYRTTMMSSGGMTARLDKLEKAGLVERCPHPEDRRALTVCVTDKGLNLVKGMMPDYVEAQAAAVDGLSKEEQQQLGNLLQKLIRTANEKKTG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2A2</accession>
    <name>A0A0M7A2A2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Recombination and DNA strand exchange inhibitor protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02000</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69145.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671698.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02000"/>
    <dbReference type="EnsemblBacteria" id="CTQ69145">
        <property type="protein sequence ID" value="CTQ69145"/>
        <property type="gene ID" value="LAX5112_02000"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1370.110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002625">
        <property type="entry name" value="Smr_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036063">
        <property type="entry name" value="Smr_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01713">
        <property type="entry name" value="Smr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00463">
        <property type="entry name" value="SMR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF160443">
        <property type="entry name" value="SSF160443"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50828">
        <property type="entry name" value="SMR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Smr" evidence="2">
        <location>
            <begin position="97"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50828"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ69145.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="188" mass="21081" checksum="3D2522B134E81DCD" modified="2015-12-09" version="1">MSKRGRKGMLSPEDRELWGKVAKTATPLDTERAKAQMAELEQFIDATPKAAAKSPKTSTAIHAPEPAKPVAPPPLRQLEHRYRKKLVRGVKQIDARIDLHGLTQDRAHDRLRGFLYEAQARGHKVVLVITGKGGGPGYAYMDERGVLRRMVPQWLAMPDVRHLVVGYEEAHTTHGGSGALYVRIRRRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2A5</accession>
    <name>A0A0M7A2A5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">UPF0434 protein LAX5112_02027</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02027</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UPF0434 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69218.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008195305.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02027"/>
    <dbReference type="EnsemblBacteria" id="CTQ69218">
        <property type="protein sequence ID" value="CTQ69218"/>
        <property type="gene ID" value="LAX5112_02027"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01187">
        <property type="entry name" value="UPF0434"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005651">
        <property type="entry name" value="Trm112-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03966">
        <property type="entry name" value="Trm112p"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69218.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="63" mass="7156" checksum="841E97A91D601BF4" modified="2015-12-09" version="1">MSETTDRPIDRKLLELLVCPVTKATLEYDAEAQELISRTAKLAYPIRNGIPIMLPDEARKLED</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2Q6</accession>
    <name>A0A0M7A2Q6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02080</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69348.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671752.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ69348">
        <property type="protein sequence ID" value="CTQ69348"/>
        <property type="gene ID" value="LAX5112_02080"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="36"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="69"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="92"/>
            <end position="109"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69348.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="134" mass="14728" checksum="BD43E5B94BE14270" modified="2015-12-09" version="1">MSLTGIYIVLFGLLLSYAFAIILLTSPILFSSLSAFLYALILMAMFVIPATLPVTLLLLVFAEWRGVGSFLYYFFAGGFVALFEAMSISAGTVPFVVVGCMSGFVYWISAGRLNSNSKNGAIERDGRYDDPEYW</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2Q8</accession>
    <name>A0A0M7A2Q8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">YciI-like protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01799</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the YciI family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68590.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671522.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01799"/>
    <dbReference type="EnsemblBacteria" id="CTQ68590">
        <property type="protein sequence ID" value="CTQ68590"/>
        <property type="gene ID" value="LAX5112_01799"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005545">
        <property type="entry name" value="YCII"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03795">
        <property type="entry name" value="YCII"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="YCII" evidence="2">
        <location>
            <begin position="18"/>
            <end position="87"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007689"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF03795"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ68590.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="97" mass="10702" checksum="958B9AF5DA85FCBE" modified="2015-12-09" version="1">MMAGNLFVVDLTYIADFSKVDALLKPHRAFLKSGYDHGVFLASGPKEPRTGGVILARADTRAELEKLIDQDPFKQEGVAAYHVTEFNPVMKADCISF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2Y1</accession>
    <name>A0A0M7A2Y1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">CENP-V/GFA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_01625</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the Gfa family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68074.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01625"/>
    <dbReference type="EnsemblBacteria" id="CTQ68074">
        <property type="protein sequence ID" value="CTQ68074"/>
        <property type="gene ID" value="LAX5112_01625"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016846">
        <property type="term" value="F:carbon-sulfur lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006913">
        <property type="entry name" value="CENP-V/GFA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011057">
        <property type="entry name" value="Mss4-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04828">
        <property type="entry name" value="GFA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51316">
        <property type="entry name" value="SSF51316"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51891">
        <property type="entry name" value="CENP_V_GFA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CENP-V/GFA" evidence="3">
        <location>
            <begin position="3"/>
            <end position="127"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005495"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51891"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ68074.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="142" mass="16278" checksum="89346FDB08B895D5" modified="2015-12-09" version="1">MTTRGHCFCKKTSWEFTGDGTWSCYCHCDDCRRNCAAPVVAWLGVPSKNFRWTGAAPRTLESSKGIYRHFCDTCGTPMAFEAEHYKGGMHLYAATLEHPENFKPEFHVNYKSKLPWLQMADDLPKYDTTLLHAPQDLSEYDT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3D7</accession>
    <name>A0A0M7A3D7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 8">Pyruvate carboxylase</fullName>
            <ecNumber evidence="3 8">6.4.1.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="17" type="primary">cfiB</name>
        <name evidence="17" type="ORF">LAX5112_02170</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="18" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="18">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>ATP + hydrogencarbonate + pyruvate = ADP + H(+) + oxaloacetate + phosphate</text>
            <dbReference type="Rhea" id="RHEA:20844"/>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16452"/>
            <dbReference type="ChEBI" id="CHEBI:17544"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.4.1.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 8">
            <name>biotin</name>
            <dbReference type="ChEBI" id="CHEBI:57586"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="2">Carbohydrate biosynthesis; gluconeogenesis.</text>
    </comment>
    <dbReference type="EC" id="6.4.1.1" evidence="3 8"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69578.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671817.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02170"/>
    <dbReference type="EnsemblBacteria" id="CTQ69578">
        <property type="protein sequence ID" value="CTQ69578"/>
        <property type="gene ID" value="LAX5112_02170"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00138"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004736">
        <property type="term" value="F:pyruvate carboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
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    <dbReference type="GO" id="GO:0006094">
        <property type="term" value="P:gluconeogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
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    <dbReference type="GO" id="GO:0006090">
        <property type="term" value="P:pyruvate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011761">
        <property type="entry name" value="ATP-grasp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005481">
        <property type="entry name" value="BC-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001882">
        <property type="entry name" value="Biotin_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011764">
        <property type="entry name" value="Biotin_carboxylation_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005482">
        <property type="entry name" value="Biotin_COase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000089">
        <property type="entry name" value="Biotin_lipoyl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003379">
        <property type="entry name" value="Carboxylase_cons_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005479">
        <property type="entry name" value="CbamoylP_synth_lsu-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016185">
        <property type="entry name" value="PreATP-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000891">
        <property type="entry name" value="PYR_CT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005930">
        <property type="entry name" value="Pyruv_COase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011054">
        <property type="entry name" value="Rudment_hybrid_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011053">
        <property type="entry name" value="Single_hybrid_motif"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02785">
        <property type="entry name" value="Biotin_carb_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00289">
        <property type="entry name" value="Biotin_carb_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00364">
        <property type="entry name" value="Biotin_lipoyl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02786">
        <property type="entry name" value="CPSase_L_D2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00682">
        <property type="entry name" value="HMGL-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02436">
        <property type="entry name" value="PYC_OADA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001594">
        <property type="entry name" value="Pyruv_carbox"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00878">
        <property type="entry name" value="Biotin_carb_C"/>
        <property type="match status" value="1"/>
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        <property type="entry name" value="SSF51230"/>
        <property type="match status" value="1"/>
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        <property type="entry name" value="SSF51246"/>
        <property type="match status" value="1"/>
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    <dbReference type="SUPFAM" id="SSF52440">
        <property type="entry name" value="SSF52440"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01235">
        <property type="entry name" value="pyruv_carbox"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="ATP_GRASP"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="BC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00188">
        <property type="entry name" value="BIOTIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50968">
        <property type="entry name" value="BIOTINYL_LIPOYL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00866">
        <property type="entry name" value="CPSASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00867">
        <property type="entry name" value="CPSASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50991">
        <property type="entry name" value="PYR_CT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6 8 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7 8" id="KW-0092">Biotin</keyword>
    <keyword evidence="4 8 17" id="KW-0436">Ligase</keyword>
    <keyword evidence="11" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5 8 10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Biotin carboxylation" evidence="15">
        <location>
            <begin position="2"/>
            <end position="455"/>
        </location>
    </feature>
    <feature type="domain" description="ATP-grasp" evidence="14">
        <location>
            <begin position="122"/>
            <end position="319"/>
        </location>
    </feature>
    <feature type="domain" description="Pyruvate carboxyltransferase" evidence="16">
        <location>
            <begin position="532"/>
            <end position="800"/>
        </location>
    </feature>
    <feature type="domain" description="Lipoyl-binding" evidence="13">
        <location>
            <begin position="1070"/>
            <end position="1145"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="12">
        <location>
            <begin position="481"/>
            <end position="508"/>
        </location>
    </feature>
    <feature type="active site" evidence="9">
        <location>
            <position position="294"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="118"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="202"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="236"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="541"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="613"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" description="via carbamate group" evidence="11">
        <location>
            <position position="710"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="739"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="741"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="874"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001953"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00004742"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00013057"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
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        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
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        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
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        <source>
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        <source>
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    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="PROSITE" id="PS50968"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="PROSITE" id="PS50975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS50979"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="PROSITE" id="PS50991"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="EMBL" id="CTQ69578.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="1146" mass="125257" checksum="D25B4081FD7C351C" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3K0</accession>
    <name>A0A0M7A3K0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Flagellin</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">flaA_2</name>
        <name evidence="6" type="ORF">LAX5112_01688</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Secreted</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="3">Bacterial flagellum</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the bacterial flagellin family.</text>
    </comment>
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        <property type="protein sequence ID" value="CTQ68244.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
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        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01688"/>
    <dbReference type="EnsemblBacteria" id="CTQ68244">
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        <property type="gene ID" value="LAX5112_01688"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
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        <property type="term" value="C:bacterial-type flagellum"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
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        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005198">
        <property type="term" value="F:structural molecule activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001492">
        <property type="entry name" value="Flagellin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046358">
        <property type="entry name" value="Flagellin_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001029">
        <property type="entry name" value="Flagellin_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42792">
        <property type="entry name" value="PTHR42792"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="Flagellin_C"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="Flagellin_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3" id="KW-0975">Bacterial flagellum</keyword>
    <keyword evidence="6" id="KW-0966">Cell projection</keyword>
    <keyword evidence="6" id="KW-0969">Cilium</keyword>
    <keyword evidence="6" id="KW-0282">Flagellum</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0964">Secreted</keyword>
    <feature type="domain" description="Flagellin_N" evidence="4">
        <location>
            <begin position="9"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="domain" description="Flagellin_C" evidence="5">
        <location>
            <begin position="423"/>
            <end position="507"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005709"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023143"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU362073"/>
        </source>
    </evidence>
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        </source>
    </evidence>
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        <source>
            <dbReference type="Pfam" id="PF00700"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="EMBL" id="CTQ68244.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="507" mass="52799" checksum="B6DF6208856D7353" modified="2015-12-09" version="1">MSDITLSSAVRANLNTLQQTASFMSDVQNKLATGKKVNSALDNPSNFFTASGLQSRANDLGTLLDDMGQSVQTIKAADDGITAITKLVESAKAKANQALQTGSQYERKQFAAQYNELLTQIEDVAKDAGYKGKNLLAGTGNDLRTIFNEDSTSKLDVSAVDYTDTTLSTGLNLSDINEGTGGGTGFNLSGGKTTITLSGADGALNSNSVLSELTALPSTTSTITFADQTVSTAGASLGTVSQTATVQDLVDGLNAQEGVRAEFDETNGELTIYSNETFALTDGTNASSTANLTFGTVEAAVTGADFTAGSTLADSGSFALGDTITLTDGNNYELGSLEIEADTTVDDLTNFINDFNGVSASFANGRVAVTSETDLTINSKRSGSDNTDFGAQGFSATTGGNFSIATDDDSGFATDNDINRTVSKLNNALSNLRSQASEFGTNLSIVENRQDFTRSLINTLEEGAGKLTLADTNEEGANLLALQTRQQLASTSLSFASQADQNVLRLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3U4</accession>
    <name>A0A0M7A3U4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02226</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69728.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ69728">
        <property type="protein sequence ID" value="CTQ69728"/>
        <property type="gene ID" value="LAX5112_02226"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809221" evidence="1">
        <location>
            <begin position="39"/>
            <end position="263"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69728.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="263" mass="29337" checksum="E2C69532937386C4" modified="2015-12-09" version="1">MKGHSEMPGYRLKSMFKTTFAASVTALTMLTAVPSAQAESPFHTGVWQLNDPAGKRGLVVSDWLVWENGLPKRWLYRRAGTNDANQFDFFTRSIGDSGFTPVGIRVYRTGEHEMKYTISEKGKDPIEVSANRLSIPNYKNSCLSVENKGNRLTGGTWAGTPQSAGKKLRLTKSKLTIDGNARNVTVEDVRVGRVGIMEDGKPLAFFTDAGGDYGVLQWFKPGVTPEVMRDTTKEVMDFKAEEIFRWPQGTCDRQIESRLKAMK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3X7</accession>
    <name>A0A0M7A3X7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Adenylate cyclase</fullName>
            <ecNumber evidence="4">4.6.1.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">cya_1</name>
        <name evidence="4" type="ORF">LAX5112_02244</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.</text>
    </comment>
    <dbReference type="EC" id="4.6.1.1" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69775.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671872.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02244"/>
    <dbReference type="EnsemblBacteria" id="CTQ69775">
        <property type="protein sequence ID" value="CTQ69775"/>
        <property type="gene ID" value="LAX5112_02244"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004016">
        <property type="term" value="F:adenylate cyclase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009190">
        <property type="term" value="P:cyclic nucleotide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035556">
        <property type="term" value="P:intracellular signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07302">
        <property type="entry name" value="CHD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1230">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001054">
        <property type="entry name" value="A/G_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018297">
        <property type="entry name" value="A/G_cyclase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00211">
        <property type="entry name" value="Guanylate_cyc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00044">
        <property type="entry name" value="CYCc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00452">
        <property type="entry name" value="GUANYLATE_CYCLASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50125">
        <property type="entry name" value="GUANYLATE_CYCLASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 4" id="KW-0456">Lyase</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="65"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="97"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="143"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="182"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="domain" description="Guanylate cyclase" evidence="3">
        <location>
            <begin position="248"/>
            <end position="375"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU000405"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ69775.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="424" mass="46204" checksum="A8AFB09C6AC7A581" modified="2015-12-09" version="1">MKASGLAVIERLRKVKWPVWLKGLASAGISSTDPYVRRRQMVVNVSALVGIADNLFHTIQNLTYAFHELMPLSIYGIIMICLFAVTSRLHRFGDNVAAIYFVLVIAAGNTFVVWSLGLESGTQAYFALGGAAFIFFGVGHWRLFAGCFCLALVLLVSTYVFAPDVGPVMPHDLAFRKQLAAQVMVNVLIISSVLIVYALTALHRAEAALAAEHERAETLIETIMPRAIADRLKKAPETRIADRHDAVTVLFADLVGFTPAARNLQPDEVVGFLDGLFRDFDHLVEEFGVEKIKTIGDAYMVVGGLHGPAHDAAVAVGHLALKMMGVIQSCEPLSGVHLNLRIGIHTGPAIAGVIGKRRFSYDVWGDAVNIASRMESHSVAGEIQVTDVFRNMAEPKFDFQERGVVEIKGVGKMRTAFLKGVKHG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4E6</accession>
    <name>A0A0M7A4E6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02135</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69497.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ69497">
        <property type="protein sequence ID" value="CTQ69497"/>
        <property type="gene ID" value="LAX5112_02135"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ69497.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="286" mass="33634" checksum="FE403BAD2F480C34" modified="2015-12-09" version="1">MSGFLRSELLSISALTFSEVFETLVWSSAEVQSALERVSRENAEKISDPNAFLCRYGSYRINFHFDVEGQTFWMTKGRVIKGKTKPLYIVPHERGSRKRKVPQIKVEDDTVITAWPDKDAEAVRRVWQKLASMFKLISDGRVIVSARTQTGDAVTLRVSDWSTQPETLWFTWQENSLKRYRKKRLVQVFECLEFNLSITEREQLTRNGPISELKVETWMAETFFERKRFCDKETVWELAKDRFPNLSHLKFKEVWKNTAPKDWKRAGKFPEKDKNINLINQIRQAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4L1</accession>
    <name>A0A0M7A4L1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Gluconate 5-dehydrogenase</fullName>
            <ecNumber evidence="1">1.1.1.69</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">gno</name>
        <name evidence="1" type="ORF">LAX5112_02112</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.1.1.69" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69432.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671774.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02112"/>
    <dbReference type="EnsemblBacteria" id="CTQ69432">
        <property type="protein sequence ID" value="CTQ69432"/>
        <property type="gene ID" value="LAX5112_02112"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008874">
        <property type="term" value="F:gluconate 5-dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ69432.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="250" mass="25911" checksum="7555D94FFCDCF142" modified="2015-12-09" version="1">MSGLFDVSGKVACVTGASSGLGRRAATVLAQAGASVVGVARRAADLDEWRQEAGGSTAAVAADLSDRERLASIIESIAEPFGPPQILIHAAGINTREPADDVTDAGWDITMLLNLTVPFFLSKAFAPAMKEKGWGRIVNFASLQTTRAFPGGIAYGASKGGIGQLTRAMAEAWSKDGITANAIGPGFFPTELTAAVFGDEERAQRNAAQTCIGRNGALDDIDGPILFLCSDASRYVTGQVLMVDGGFTAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4T7</accession>
    <name>A0A0M7A4T7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative integral membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02051</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69270.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671732.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ69270">
        <property type="protein sequence ID" value="CTQ69270"/>
        <property type="gene ID" value="LAX5112_02051"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="31"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="60"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="85"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="111"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="154"/>
            <end position="174"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ69270.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="174" mass="19012" checksum="6FA19A2ACEC63D5E" modified="2015-12-09" version="1">MRRFPRIKFKLPDIFLLREDPHFIELSIGRILPLAALIGFGVLVGLVFETGVSHPYDKVLHIAFFALLTLSIHALFCCRLRISAFIAMSLGVLGEIVQGMLPHHQMSVPDIVANAIGVSLVVALIALIRSETRQALSDETDNIDLGEMGLKPVPTRYLSGESVDDSGSGFSSDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5P4</accession>
    <name>A0A0M7A5P4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02290</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ69937.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02290"/>
    <dbReference type="EnsemblBacteria" id="CTQ69937">
        <property type="protein sequence ID" value="CTQ69937"/>
        <property type="gene ID" value="LAX5112_02290"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="57"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="93"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="120"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="151"/>
            <end position="171"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69937.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="312" mass="34627" checksum="E6113EA306207294" modified="2015-12-09" version="1">MWVPDARRWLLTWQLWAGGLIAVLTFAPVLYWNHLNDWVSFYKQFGRAGSDGYTAKYIFEFIGAFVGLLNPLIALLAAFGAARLFGRFLKQDVVASLIILTVLPFLIYLAYHSLHSRVQANWPAPLFPVIALMAAIFVGDLQDRSRNWIKLATTGVCLGLVIAFAVQLHAVSAFTGQFARKDPTHQLRGWPEISAALKDFVGKTGAAFVLTSGYGLNGQIAFLMKDTVPVHQFTQRIRYIMAPQPQEAGFDGAGLYVAESRRDQADVLKARFDTVVQVAVLERLVKGVPLEELVVYKLSGRKTAALDPLETK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5T7</accession>
    <name>A0A0M7A5T7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02512</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70448.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672088.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70448">
        <property type="protein sequence ID" value="CTQ70448"/>
        <property type="gene ID" value="LAX5112_02512"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809251" evidence="1">
        <location>
            <begin position="19"/>
            <end position="124"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70448.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="124" mass="12823" checksum="34CB94E29EF5F061" modified="2015-12-09" version="1">MRSFLTVLLLILFTAVHGVPAAAFNVSDWESQAGSFSVAAVLEDVNNVELPMQTADLNEVMACCGQEVSDAAPHAGSKCSSDCASVLPMPPGLVVPGSVRVHENAVKTLTMAAPAVADHPPQPV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5V7</accession>
    <name>A0A0M7A5V7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Protease 3</fullName>
            <ecNumber evidence="7">3.4.24.55</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ptrA_1</name>
        <name evidence="7" type="ORF">LAX5112_02315</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 3">Belongs to the peptidase M16 family.</text>
    </comment>
    <dbReference type="EC" id="3.4.24.55" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ69997.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02315"/>
    <dbReference type="EnsemblBacteria" id="CTQ69997">
        <property type="protein sequence ID" value="CTQ69997"/>
        <property type="gene ID" value="LAX5112_02315"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004222">
        <property type="term" value="F:metalloendopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011249">
        <property type="entry name" value="Metalloenz_LuxS/M16"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011765">
        <property type="entry name" value="Pept_M16_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001431">
        <property type="entry name" value="Pept_M16_Zn_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007863">
        <property type="entry name" value="Peptidase_M16_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00675">
        <property type="entry name" value="Peptidase_M16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05193">
        <property type="entry name" value="Peptidase_M16_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63411">
        <property type="entry name" value="SSF63411"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00143">
        <property type="entry name" value="INSULINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-0645">Protease</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidase_M16" evidence="5">
        <location>
            <begin position="71"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_M16_C" evidence="6">
        <location>
            <begin position="224"/>
            <end position="406"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="464"/>
            <end position="487"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007261"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU004447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00675"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF05193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ69997.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="487" mass="53411" checksum="4B81BC7CECB79D36" modified="2015-12-09" version="1">MIGLRQPIPILSFDRTLRSTLLASLFSATLFAVPLSGVSLSKANALEVTQDEIVIAPNLERFVLDNGLEVVVIPDRRAPVVTHMLWYKVGSADEPEGQSGVAHFLEHLMFKGTEDHPDGEFSKIIADRGGQENAFTSYDYTAYFQRVAKEHLPLMMKMEADRMENLVLSNAVVAPERDVVLEERRDRVESDPGSRLREAMNAITFVNHPYGSPIIGWQNEIEALNKDAAIEFYDRFYTPNNAVLVVAGDVEPATVLDLAQNTYGKVPRRAEPGERLRPAEPPLAGERRIVVTDPRVRQEALSHTWIVPSQTTGEGRTPEALDILSYVLGQGPSSRLYKALVLDAGLATSAGAYYQSTALNSGRFVVYASPRPGHTLEDIEEAAAQELSKLLEEGVTEEEVDRAKRSMIASSIYAQDSQTGLARLFGAALTTGMNVEDVQTWPSQIQAVTPEDVEAVARDYLTATPVTGELRSPQSNADTADKSGKES</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A612</accession>
    <name>A0A0M7A612_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">HTH-type transcriptional regulator YesS</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">yesS</name>
        <name evidence="5" type="ORF">LAX5112_02280</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69856.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02280"/>
    <dbReference type="EnsemblBacteria" id="CTQ69856">
        <property type="protein sequence ID" value="CTQ69856"/>
        <property type="gene ID" value="LAX5112_02280"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032783">
        <property type="entry name" value="AraC_lig"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12852">
        <property type="entry name" value="Cupin_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="4">
        <location>
            <begin position="226"/>
            <end position="324"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ69856.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="329" mass="36196" checksum="B69C3EE36AA12995" modified="2015-12-09" version="1">MMMTANPHVPDPNAIAQPLGDPLGEILHLLKLTGTFYCQSRLTAPWGVAIPGFDNVMSFAVIIGGRCWMTVGGGEPFQVEKGNLVLMTKGQELNFRSNLDTPLLTLDELPIRKVTELYETLEFGGGGEETSIMYGIVRLDHAASGLLMQLLPEVLKIDTWTEDAGSWLQGTLQFIAREARELRPGGETVITRLADVVVIEAIRRWINTAPEANRGWLKAARDPQIGRAVLAIHRAPADSWTLETLADVAGMSRSAFSARFTELVGMPAIEYLTVWRMHLARARLLETSQPIAAISASLGYQSEPAFNRAFKRVFHIPPGQVRKARAANI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A697</accession>
    <name>A0A0M7A697_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Methicillin resistance regulatory protein MecI</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">mecI</name>
        <name evidence="2" type="ORF">LAX5112_02567</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the BlaI transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70665.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008191933.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02567"/>
    <dbReference type="EnsemblBacteria" id="CTQ70665">
        <property type="protein sequence ID" value="CTQ70665"/>
        <property type="gene ID" value="LAX5112_02567"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045892">
        <property type="term" value="P:negative regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005650">
        <property type="entry name" value="BlaI_family"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34134">
        <property type="entry name" value="PTHR34134"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03965">
        <property type="entry name" value="Penicillinase_R"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF019455">
        <property type="entry name" value="CopR_AtkY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00011046"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70665.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="131" mass="15075" checksum="58FD74E1A178CCC8" modified="2015-12-09" version="1">MRKRKSNELLTEVELEFMTELWKIGEGSVRDVLACLPPERKLAYTSCATIMRILDEKGFVDSRKDGKTLIYSPRLSKDSYQSRSLRNLSDKLFDGTPASLVARLVDDYDLSQNDLEEIRALLDRRRTDDAT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6M4</accession>
    <name>A0A0M7A6M4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02363</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70112.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671982.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02363"/>
    <dbReference type="EnsemblBacteria" id="CTQ70112">
        <property type="protein sequence ID" value="CTQ70112"/>
        <property type="gene ID" value="LAX5112_02363"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009325">
        <property type="entry name" value="DUF983"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06170">
        <property type="entry name" value="DUF983"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="57"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="83"/>
            <end position="105"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70112.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="133" mass="14272" checksum="FF2E4C1657D6A8BC" modified="2015-12-09" version="1">MEDKAHFPPVNPVTAGLSGACPRCGQGKLFDGFLSVKKSCSTCGLDYSFADSGDGPAVFVIMIVGFIVVGLVLFVELSFQPPVWLHLILWLPLTVVLAGGILRPLKGLMIAVQYRHKAEEGRLDTGGDQTDQL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6Y1</accession>
    <name>A0A0M7A6Y1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="16">ATP synthase subunit b</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="16">ATP synthase F(0) sector subunit b</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="16">ATPase subunit I</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="16">F-type ATPase subunit b</fullName>
            <shortName evidence="16">F-ATPase subunit b</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="19" type="primary">atpF2</name>
        <name evidence="16" type="synonym">atpF</name>
        <name evidence="19" type="ORF">LAX5112_02412</name>
    </gene>
    <organism evidence="19 20">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="20" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="20">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="14">Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0). The b'-subunit is a diverged and duplicated form of b found in plants and photosynthetic bacteria.</text>
    </comment>
    <comment type="function">
        <text evidence="13 16">F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.</text>
    </comment>
    <comment type="subunit">
        <text evidence="15 16">F-type ATPases have 2 components, F(1) - the catalytic core - and F(0) - the membrane proton channel. F(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). F(0) has three main subunits: a(1), b(2) and c(10-14). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. F(1) is attached to F(0) by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta and b chains.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Single-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="16">Cell membrane</location>
            <topology evidence="16">Single-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 16 17">Belongs to the ATPase B chain family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70212.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008190053.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02412"/>
    <dbReference type="EnsemblBacteria" id="CTQ70212">
        <property type="protein sequence ID" value="CTQ70212"/>
        <property type="gene ID" value="LAX5112_02412"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045263">
        <property type="term" value="C:proton-transporting ATP synthase complex, coupling factor F(o)"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046933">
        <property type="term" value="F:proton-transporting ATP synthase activity, rotational mechanism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01398">
        <property type="entry name" value="ATP_synth_b_bprime"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002146">
        <property type="entry name" value="ATP_synth_b/b'su_bac/chlpt"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00430">
        <property type="entry name" value="ATP-synt_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="12 16" id="KW-0066">ATP synthesis</keyword>
    <keyword evidence="5 16" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 16 17" id="KW-0138">CF(0)</keyword>
    <keyword evidence="18" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="8 16 17" id="KW-0375">Hydrogen ion transport</keyword>
    <keyword evidence="10 16 17" id="KW-0406">Ion transport</keyword>
    <keyword evidence="11 16" id="KW-0472">Membrane</keyword>
    <keyword evidence="20" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 16 17" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 16" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4 16 17" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="30"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="18">
        <location>
            <begin position="74"/>
            <end position="131"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004377"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022547"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022781"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023310"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00025198"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00025614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00025830"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01398"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="RuleBase" id="RU003848"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="EMBL" id="CTQ70212.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="181" mass="19422" checksum="1D2D9A1BD5DA2CAB" modified="2015-12-09" version="1">MAGNAEHNTEIGIPAEEHGAGFPPFDATTYSSQLLWLAITFGFFYWIMKNVAVPRIAGILEDRKDRIAGDLGEANRLKDETDAAIAAYEQALAEARNKAHGIASDTRAKLKADQEARREKAEADIAEKLKAAEAHIAGIKTEALSQIGDIAGDTTSALVEQLMGKAPTKTDLTKALKSAMN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A730</accession>
    <name>A0A0M7A730_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">PilZ domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02432</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70252.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672036.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70252">
        <property type="protein sequence ID" value="CTQ70252"/>
        <property type="gene ID" value="LAX5112_02432"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035438">
        <property type="term" value="F:cyclic-di-GMP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009875">
        <property type="entry name" value="PilZ_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07238">
        <property type="entry name" value="PilZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PilZ" evidence="2">
        <location>
            <begin position="89"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="187"/>
            <end position="211"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07238"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ70252.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="211" mass="23406" checksum="2131F4FC4267B901" modified="2015-12-09" version="1">MKEIFDRYSGGSNIMVLVLDFETLDCEEAIATDITRSGCRIRDTSHSEKNKLIGLRLSGLDKMVKGKIRDILEEDVRVSFLFEDVTKREKRKEQRRTVSIAASVLPGHGMPPVNCQIVDASLSGCRFFCNQLDQLPDTIALRIPGMDLPVGGSIVWRANGYAGVKMNWQFSGKTEFMAAKTIRPPSLAEKAGANGSRKKTLAKQPHIIPAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7U9</accession>
    <name>A0A0M7A7U9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02214</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69694.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671851.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02214"/>
    <dbReference type="EnsemblBacteria" id="CTQ69694">
        <property type="protein sequence ID" value="CTQ69694"/>
        <property type="gene ID" value="LAX5112_02214"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="28"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="56"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="91"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="129"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="231"/>
            <end position="251"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="159"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="175"/>
            <end position="189"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ69694.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="261" mass="28614" checksum="67775601465F1994" modified="2015-12-09" version="1">MADEMETEPVSRICNDIRRHETANDRGWKIAILAGAVLLGLGDIVGSMLVDALGPALLHWAELVVLTPIAVWIICRAFFGHWPERIWPARFFRYGIGLAALGTYIFTLVTAIGPGLFPEALSGPHGPALYFEATGMLIILALTLSVWSRWTQSLPAFLGSSKTSSCSAPDCRPLSEEPARQEAETRAPNTWHRRPATARTDPDFHEASWPAAKDPAVRTSIFSDTALETTAILSGLAILAAVFFAGLIFFIDLPWWVRLAF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A818</accession>
    <name>A0A0M7A818_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">OsmC-like protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02775</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71305.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672327.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02775"/>
    <dbReference type="EnsemblBacteria" id="CTQ71305">
        <property type="protein sequence ID" value="CTQ71305"/>
        <property type="gene ID" value="LAX5112_02775"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015946">
        <property type="entry name" value="KH_dom-like_a/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003718">
        <property type="entry name" value="OsmC/Ohr_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036102">
        <property type="entry name" value="OsmC/Ohrsf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02566">
        <property type="entry name" value="OsmC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82784">
        <property type="entry name" value="SSF82784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ71305.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="156" mass="17197" checksum="0D538CD638EBBC2B" modified="2015-12-09" version="1">MTKTHEYVSNIVWTGNRGQGTKTYRGYNRTWEIRTQGKRPVQCSNDPVLGGDPSLHNPEDLLLSALSSCHMLWYLHLASNAGIAVMGYEDVPLAVGETERSGAGRFLSATLRPRITVPEGTDLTAADAIHGEIHNVCFIARSVNFPVRIEANYKTV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8A7</accession>
    <name>A0A0M7A8A7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Lectin-like protein BA14k</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">LAX5112_02574</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Has immunoglobulin-binding and hemagglutination properties, and can bind to mannose. Essential for virulence. May be involved in LPS biosynthesis or polysaccharide transport.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the BA14k family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70682.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040450870.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02574"/>
    <dbReference type="EnsemblBacteria" id="CTQ70682">
        <property type="protein sequence ID" value="CTQ70682"/>
        <property type="gene ID" value="LAX5112_02574"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030246">
        <property type="term" value="F:carbohydrate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012413">
        <property type="entry name" value="BA14K"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07886">
        <property type="entry name" value="BA14K"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0430">Lectin</keyword>
    <keyword evidence="9" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10" id="KW-0732">Signal</keyword>
    <keyword evidence="9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0843">Virulence</keyword>
    <feature type="signal peptide" evidence="10">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809194" description="Lectin-like protein BA14k" evidence="10">
        <location>
            <begin position="25"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="68"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="33"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="8">
        <location>
            <begin position="40"/>
            <end position="54"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004162"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010270"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00020552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022734"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023026"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00025321"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ70682.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="156" mass="16759" checksum="1922DE9952F9C0AA" modified="2015-12-09" version="1">MQTFAKRILAVALTGALMLPAVSAAEAGPRDGWRHGGGWHEGHRPHRGHNRHNHKHKHIHKHKNNNNVGAAIAAGVIGLAAGAIILGATSKPSYAGPPRGPAYPYPRAPYPGPVSGPVGFQPWSPAWYDYCSSKYRSFNPSTGTFTTYSGVQKFCQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="32" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9H3</accession>
    <name>A0A0M7A9H3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 12">DNA gyrase subunit B</fullName>
            <ecNumber evidence="4 12">5.6.2.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="primary">gyrB_2</name>
        <name evidence="12" type="synonym">gyrB</name>
        <name evidence="15" type="ORF">LAX5112_02763</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="12">A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 12">
            <text>ATP-dependent breakage, passage and rejoining of double-stranded DNA.</text>
            <dbReference type="EC" id="5.6.2.2"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="12">Heterotetramer, composed of two GyrA and two GyrB chains. In the heterotetramer, GyrA contains the active site tyrosine that forms a transient covalent intermediate with DNA, while GyrB binds cofactors and catalyzes ATP hydrolysis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="12">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="miscellaneous">
        <text evidence="12">Few gyrases are as efficient as E.coli at forming negative supercoils. Not all organisms have 2 type II topoisomerases; in organisms with a single type II topoisomerase this enzyme also has to decatenate newly replicated chromosomes.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the type II topoisomerase GyrB family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="12">Belongs to the type II topoisomerase family.</text>
    </comment>
    <dbReference type="EC" id="5.6.2.2" evidence="4 12"/>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71271.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02763"/>
    <dbReference type="EnsemblBacteria" id="CTQ71271">
        <property type="protein sequence ID" value="CTQ71271"/>
        <property type="gene ID" value="LAX5112_02763"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005694">
        <property type="term" value="C:chromosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003918">
        <property type="term" value="F:DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006265">
        <property type="term" value="P:DNA topological change"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006261">
        <property type="term" value="P:DNA-templated DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd03366">
        <property type="entry name" value="TOPRIM_TopoIIA_GyrB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.670">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01898">
        <property type="entry name" value="GyrB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002288">
        <property type="entry name" value="DNA_gyrase_B_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011557">
        <property type="entry name" value="GyrB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041423">
        <property type="entry name" value="GyrB_insert"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014721">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold_subgr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001241">
        <property type="entry name" value="Topo_IIA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013760">
        <property type="entry name" value="Topo_IIA-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013759">
        <property type="entry name" value="Topo_IIA_B_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013506">
        <property type="entry name" value="Topo_IIA_bsu_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018522">
        <property type="entry name" value="TopoIIA_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006171">
        <property type="entry name" value="TOPRIM_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034160">
        <property type="entry name" value="TOPRIM_GyrB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00204">
        <property type="entry name" value="DNA_gyraseB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00986">
        <property type="entry name" value="DNA_gyraseB_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18053">
        <property type="entry name" value="GyrB_insert"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01751">
        <property type="entry name" value="Toprim"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00433">
        <property type="entry name" value="TOP2c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="SSF54211"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56719">
        <property type="entry name" value="SSF56719"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01059">
        <property type="entry name" value="gyrB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00177">
        <property type="entry name" value="TOPOISOMERASE_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50880">
        <property type="entry name" value="TOPRIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 12" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="12" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="11 12 15" id="KW-0413">Isomerase</keyword>
    <keyword evidence="9" id="KW-0460">Magnesium</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7 12" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10 12" id="KW-0799">Topoisomerase</keyword>
    <feature type="domain" description="Toprim" evidence="14">
        <location>
            <begin position="439"/>
            <end position="554"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="13">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000185"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012895"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00019166"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023029"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS50880"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="CTQ71271.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="820" mass="90032" checksum="2ECBB17EB7B6EBAA" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAF4</accession>
    <name>A0A0M7AAF4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Arsenate reductase</fullName>
            <ecNumber evidence="3">1.20.4.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">arsC_1</name>
        <name evidence="4" type="ORF">LAX5112_02585</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>[glutaredoxin]-dithiol + arsenate + glutathione + H(+) = arsenite + glutathionyl-S-S-[glutaredoxin] + H2O</text>
            <dbReference type="Rhea" id="RHEA:22016"/>
            <dbReference type="Rhea" id="RHEA-COMP:10729"/>
            <dbReference type="Rhea" id="RHEA-COMP:17668"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29242"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:48597"/>
            <dbReference type="ChEBI" id="CHEBI:57925"/>
            <dbReference type="ChEBI" id="CHEBI:146199"/>
            <dbReference type="EC" id="1.20.4.1"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1 2 3">Belongs to the ArsC family.</text>
    </comment>
    <dbReference type="EC" id="1.20.4.1" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70713.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672172.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02585"/>
    <dbReference type="EnsemblBacteria" id="CTQ70713">
        <property type="protein sequence ID" value="CTQ70713"/>
        <property type="gene ID" value="LAX5112_02585"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008794">
        <property type="term" value="F:arsenate reductase (glutaredoxin) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd03034">
        <property type="entry name" value="ArsC_ArsC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006659">
        <property type="entry name" value="Arsenate_reductase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006660">
        <property type="entry name" value="Arsenate_reductase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30041">
        <property type="entry name" value="PTHR30041"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03960">
        <property type="entry name" value="ArsC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00014">
        <property type="entry name" value="arsC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51353">
        <property type="entry name" value="ARSC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007198"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01282"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU362029"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ70713.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="137" mass="15389" checksum="036877168AAC4FB9" modified="2015-12-09" version="1">MTITIYHNPKCGTSRNTLEMIRKAGVDPVVIEYLITPPSRAELVDLIARMEISVRDLLRQKGTPFDELGLDDEKWTDDQLIDFMMEHPILINRPIVVSDKGVRLCRPSERVVDLLPVDIGAFTKEDGEVVNAGSTNV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAF9</accession>
    <name>A0A0M7AAF9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Putrescine oxidase</fullName>
            <ecNumber evidence="4">1.4.3.10</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">puo_1</name>
        <name evidence="4" type="ORF">LAX5112_02807</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <dbReference type="EC" id="1.4.3.10" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71396.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672348.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02807"/>
    <dbReference type="EnsemblBacteria" id="CTQ71396">
        <property type="protein sequence ID" value="CTQ71396"/>
        <property type="gene ID" value="LAX5112_02807"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050232">
        <property type="term" value="F:putrescine oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002937">
        <property type="entry name" value="Amino_oxidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001613">
        <property type="entry name" value="Flavin_amine_oxidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006311">
        <property type="entry name" value="TAT_signal"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01593">
        <property type="entry name" value="Amino_oxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00757">
        <property type="entry name" value="AMINEOXDASEF"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 4" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Amino_oxidase" evidence="3">
        <location>
            <begin position="55"/>
            <end position="458"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01593"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ71396.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="464" mass="50810" checksum="8C74912B492DAAEC" modified="2015-12-09" version="1">MKRGRKIFTDTRGRATRRQVLKTGAAAALTAPFLNASLAKAENDDFDVIVIGAGIAGLAAARRLQDLGYAVVVLEATSAVGGRIRTDWSLGAPFEVGAGWIHRPDGNPVSKLADEIDAPTYVTSDESYQVFAQDGAAVPRSEINSKYRDLMRLYKRVDDTFDNDQSLSEAIRRVSQDSLQDPALRWMMSAYTEFSTGGPIEKLSAYYFDEDDEYDGADVILAKGYDQIPKSLADGLDVRFDTVVEAVEYEEGDGAAVYTSTGTFESYFVICTVPLGVLKKGAISFDPPLPKAHQKSINEIGFGSVTKLALKFDRPFWPEDVQYLGYMSAPKGRWNYFLNYRTFSPENILLGVSVGDYPFVAEAMSDPDMIADCMGALRAIFGEDIPEPTGHLVTRWSEDPHTFGAYSYSAVGNTPADFDRFAKPVANTILFAGEHATFDFHGTTHGAYLTGLVAANLIEDELAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="31" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAR6</accession>
    <name>A0A0M7AAR6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Malate dehydrogenase</fullName>
            <ecNumber evidence="2">1.1.1.37</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">mdh_2</name>
        <name evidence="2" type="synonym">mdh</name>
        <name evidence="8" type="ORF">LAX5112_02866</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Catalyzes the reversible oxidation of malate to oxaloacetate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>(S)-malate + NAD(+) = H(+) + NADH + oxaloacetate</text>
            <dbReference type="Rhea" id="RHEA:21432"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15589"/>
            <dbReference type="ChEBI" id="CHEBI:16452"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="EC" id="1.1.1.37"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the LDH/MDH superfamily. MDH type 3 family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.37" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71562.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672386.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02866"/>
    <dbReference type="EnsemblBacteria" id="CTQ71562">
        <property type="protein sequence ID" value="CTQ71562"/>
        <property type="gene ID" value="LAX5112_02866"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030060">
        <property type="term" value="F:L-malate dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019752">
        <property type="term" value="P:carboxylic acid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006099">
        <property type="term" value="P:tricarboxylic acid cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01339">
        <property type="entry name" value="LDH-like_MDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00487">
        <property type="entry name" value="Malate_dehydrog_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001557">
        <property type="entry name" value="L-lactate/malate_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022383">
        <property type="entry name" value="Lactate/malate_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001236">
        <property type="entry name" value="Lactate/malate_DH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015955">
        <property type="entry name" value="Lactate_DH/Glyco_Ohase_4_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011275">
        <property type="entry name" value="Malate_DH_type3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02866">
        <property type="entry name" value="Ldh_1_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00056">
        <property type="entry name" value="Ldh_1_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000102">
        <property type="entry name" value="Lac_mal_DH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00086">
        <property type="entry name" value="LLDHDRGNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56327">
        <property type="entry name" value="SSF56327"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01763">
        <property type="entry name" value="MalateDH_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0520">NAD</keyword>
    <keyword evidence="2 5 8" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0816">Tricarboxylic acid cycle</keyword>
    <feature type="domain" description="Ldh_1_N" evidence="6">
        <location>
            <begin position="5"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="domain" description="Ldh_1_C" evidence="7">
        <location>
            <begin position="148"/>
            <end position="304"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="2 3">
        <location>
            <position position="176"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <begin position="10"/>
            <end position="15"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="34"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="83"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2 4">
        <location>
            <position position="89"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="96"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <begin position="119"/>
            <end position="121"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2 4">
        <location>
            <position position="121"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2 4">
        <location>
            <position position="152"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022532"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00487"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR000102-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR000102-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU003369"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00056"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF02866"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ71562.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="320" mass="33764" checksum="AF44B00149B58C79" modified="2015-12-09" version="1">MARNKIALIGSGQIGGTLAHLAGLKELGDIVLFDIAEGMPQGKALDLAESSPVDGFDAKLAGTNTYEAIEGSDVVIVTAGVPRKPGMSRDDLLEINLKVMEQVGAGIAKYAPNAFVICITNPLDAMVWALQKFSGLPKNKVVGMAGVLDSARFRYFLADEFNVSVEDVTAFVLGGHGDTMVPLTRYSTVAGIPLTDLVKMGWCTAERLEEIVQRTRDGGAEIVGLLKTGSAFYAPAASAIQMAESYLKDKKRVLPCAAALDGQYGLKDTYVGVPVVIGAEGVERIIEIDLQGDEKGGFEKSVASVDGLVEACKKIQPALA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AB33</accession>
    <name>A0A0M7AB33_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">PUCC protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02940</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the PucC family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71821.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672456.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02940"/>
    <dbReference type="EnsemblBacteria" id="CTQ71821">
        <property type="protein sequence ID" value="CTQ71821"/>
        <property type="gene ID" value="LAX5112_02940"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06176">
        <property type="entry name" value="MFS_BCD_PucC-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026036">
        <property type="entry name" value="PucC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004896">
        <property type="entry name" value="PucC-rel"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23538">
        <property type="entry name" value="PTHR23538"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03209">
        <property type="entry name" value="PUCC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF016565">
        <property type="entry name" value="PucC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="20"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="47"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="89"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="117"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="156"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="185"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="242"/>
            <end position="261"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="281"/>
            <end position="301"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="313"/>
            <end position="337"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="343"/>
            <end position="367"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="379"/>
            <end position="401"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="413"/>
            <end position="434"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008412"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ71821.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="456" mass="47264" checksum="8B411A68E7881600" modified="2015-12-09" version="1">MIGRGDANQQNSAAVKGLSWVSILRLGLVQASLGAIVVLTNSTLNRVMIVELALAAVIPGLLVGLHYGVQISRPFWGHRSDIGNSRTQWILGGLALLAISGTAAAATTFLFEINFAAGLLAAVLAYALIGVGIGASGTSLLTLIATKTAPERRASAATITWMLMIAGIVVTSIVTGINLEPYSHLRLVTVTALTGVVVLVLSAIAVAGIERKPTMVGETGREKPGSFRESVREVWSDPEARLLTVFIFLSMLAYSTQDLILEPFAGLLFGMSPGETTKLSGTQHGGIFAGMALVGIAGWLFSKRKPGLMKMFIVTGCVGSGMALTGLAVSASFAPAWPLEINIFVLGFMNGAFAVAAIGTMMILAGAGKKANEGMRMGVWGAAQAISFGLGGLAGTIALTLGRWATAQDSTAFAIVFSMEAVLFLMSAAIALRIGGGQVAQPRLPVHREPSAVPAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AB92</accession>
    <name>A0A0M7AB92_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02683</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71003.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672243.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ71003">
        <property type="protein sequence ID" value="CTQ71003"/>
        <property type="gene ID" value="LAX5112_02683"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018883">
        <property type="entry name" value="Delta_CA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10563">
        <property type="entry name" value="CA_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809372" evidence="1">
        <location>
            <begin position="24"/>
            <end position="262"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71003.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="262" mass="27768" checksum="2B7B0021D8FC03E0" modified="2015-12-09" version="1">MTAYFKASIAALALLTVPVAANAENLCQGYGPQTPRDISNTAGSNTATVAFAPKAATLNLCNLHTHTNAEHKGPGFSVFVDDSDHGGFRCNETDTLTEAELAAPESDAFHGVKPGDTIEVHWVFSSCNVSPGKGLGSCLSDSCVNPQLRVEAQTFLVVNDSNALNFMDFAYQDNIVDGLHQPKALPTGTGSPVTFIGSTTGPSYSQAKCSPFQVTWSVRPQCAKVDINSLNAWAEAGNIFQEDHSHGVRQLVTAEELLAPIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACJ9</accession>
    <name>A0A0M7ACJ9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Transcriptional regulator, y4mF family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">LAX5112_03311</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the short-chain fatty acyl-CoA assimilation regulator (ScfR) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72808.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672733.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03311"/>
    <dbReference type="EnsemblBacteria" id="CTQ72808">
        <property type="protein sequence ID" value="CTQ72808"/>
        <property type="gene ID" value="LAX5112_03311"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026281">
        <property type="entry name" value="HTH_RamB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010359">
        <property type="entry name" value="IrrE_HExxH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018653">
        <property type="entry name" value="ScfR_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06114">
        <property type="entry name" value="Peptidase_M78"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09856">
        <property type="entry name" value="ScfRs"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF019251">
        <property type="entry name" value="Rv0465c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00530">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="5">
        <location>
            <begin position="11"/>
            <end position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007227"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ72808.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="479" mass="53909" checksum="C608587AE1B3DF22" modified="2015-12-09" version="1">MQKNLYSGHTLRQVRADTGLSQVEFAKKLGLSTPYINQIENNNRPVTASVLLAIYRVFGTDLAAFEENDLDRMTQDLEEIFADTRFHGTRISKQDLHELATRAPEAARAIMDMYGTMRAYHEKDAGEDDLLQMNASDDGTGSINKSAYEEVRDYFHYQDNYVDAIDRAAEQLAIKINLLADAPKLTALTNWLHDTYNIAVEQHGAEDAALIRHNEFERRISIHRSVPDSSKSFLLGSVIAELYAKDILTSEVADARFRTQSAESIARLALRNFFAGSLLLPYEAFLEAAAASRHDIQRLSHQMDASIEQICHRLSTLQRAGSKGIPFYFVKIDRAGNVVKRHSATRFQFARFGGSCPRWNVHQAFEQTTDKFISQIAQMPDGVKYLCVATSVTKHTTDYKTQARRYALGFGCEAQYADAIVYADGLALDDRAEPEPLGVNCRICPRDNCDQRAFPAINTTPFIDSRERGIVPYRAKATR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACR7</accession>
    <name>A0A0M7ACR7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Fructoselysine 3-epimerase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03264</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72669.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672683.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03264"/>
    <dbReference type="EnsemblBacteria" id="CTQ72669">
        <property type="protein sequence ID" value="CTQ72669"/>
        <property type="gene ID" value="LAX5112_03264"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036237">
        <property type="entry name" value="Xyl_isomerase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013022">
        <property type="entry name" value="Xyl_isomerase-like_TIM-brl"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01261">
        <property type="entry name" value="AP_endonuc_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51658">
        <property type="entry name" value="SSF51658"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AP_endonuc_2" evidence="1">
        <location>
            <begin position="49"/>
            <end position="256"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01261"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72669.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="272" mass="30142" checksum="042645B3A6B548BA" modified="2015-12-09" version="1">MSSLPILGAAMPLSSFERHRDLMLEKQRDLELQDFVTGEVLNGDWAPVADHAKKLLDGHEGKVGIHGPFWGFTVDAKDPDIREIVKKRLLQGLEVCEAIGGTHMVVHSPYSTWDYNNLDNYETGRANKIELCHLTMQEAVKRAEDIGCELVLENIEDKDPYARIELAESFGSQAVKVSIDTGHAHYAHGSTGAPPVDYFIKAAGNNLRHIHLQDADGYADRHWTLGEGTINWPTVFAELRKLDSDPRLIVELRDVSGLPASIANMEALGLAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACS6</accession>
    <name>A0A0M7ACS6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">2-acyl-glycerophospho-ethanolamine acyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02859</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71543.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672381.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02859"/>
    <dbReference type="EnsemblBacteria" id="CTQ71543">
        <property type="protein sequence ID" value="CTQ71543"/>
        <property type="gene ID" value="LAX5112_02859"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016746">
        <property type="term" value="F:acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045746">
        <property type="entry name" value="ACT14924-like_Acyltransf_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002123">
        <property type="entry name" value="Plipid/glycerol_acylTrfase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19576">
        <property type="entry name" value="Acyltransf_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00563">
        <property type="entry name" value="PlsC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PlsC" evidence="1">
        <location>
            <begin position="105"/>
            <end position="227"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00563"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71543.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="299" mass="33959" checksum="8C6EA954FFB68F3B" modified="2015-12-09" version="1">MRTTDQTTTTLPTRHENEAVAARLPADPHIVDVLISERGKQVMASPWWPLIRPFAFKILRYRSAVEMANKIDHMSAVDVFRHLIDLLQLNVTTLGLDRVPTDGPVVLVSNHPTGIADGVVLFDAIKERREDLAIFANRDAIRINPQLADMIIPVEWRADFKSREKSKETLKIASSAFSKERVVVLFPSGRLAYWHQGKLTERPWMTSALALARKNKAPIIPMHMGGRNSGLFYFLARVSTELRDMTVFNELLNKKNAEFRVHFGKPIRPERLDGDLTELTEQMRIHCAETLASDPDAEF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEB6</accession>
    <name>A0A0M7AEB6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Type VI secretion system OmpA/MotB family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03293</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72772.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72772">
        <property type="protein sequence ID" value="CTQ72772"/>
        <property type="gene ID" value="LAX5112_03293"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006665">
        <property type="entry name" value="OmpA-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036737">
        <property type="entry name" value="OmpA-like_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103088">
        <property type="entry name" value="SSF103088"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51123">
        <property type="entry name" value="OMPA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="OmpA-like" evidence="2">
        <location>
            <begin position="68"/>
            <end position="218"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00473"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ72772.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="779" mass="85286" checksum="3EFBA295A43062E4" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFH7</accession>
    <name>A0A0M7AFH7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Peptide methionine sulfoxide reductase MsrA</fullName>
            <shortName evidence="4">Protein-methionine-S-oxide reductase</shortName>
            <ecNumber evidence="4">1.8.4.11</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">Peptide-methionine (S)-S-oxide reductase</fullName>
            <shortName evidence="4">Peptide Met(O) reductase</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="4 6" type="primary">msrA</name>
        <name evidence="6" type="ORF">LAX5112_03672</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 4">
            <text>[thioredoxin]-disulfide + H2O + L-methionine = [thioredoxin]-dithiol + L-methionine (S)-S-oxide</text>
            <dbReference type="Rhea" id="RHEA:19993"/>
            <dbReference type="Rhea" id="RHEA-COMP:10698"/>
            <dbReference type="Rhea" id="RHEA-COMP:10700"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:50058"/>
            <dbReference type="ChEBI" id="CHEBI:57844"/>
            <dbReference type="ChEBI" id="CHEBI:58772"/>
            <dbReference type="EC" id="1.8.4.11"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2 4">
            <text>[thioredoxin]-disulfide + H2O + L-methionyl-[protein] = [thioredoxin]-dithiol + L-methionyl-(S)-S-oxide-[protein]</text>
            <dbReference type="Rhea" id="RHEA:14217"/>
            <dbReference type="Rhea" id="RHEA-COMP:10698"/>
            <dbReference type="Rhea" id="RHEA-COMP:10700"/>
            <dbReference type="Rhea" id="RHEA-COMP:12313"/>
            <dbReference type="Rhea" id="RHEA-COMP:12315"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16044"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:44120"/>
            <dbReference type="ChEBI" id="CHEBI:50058"/>
            <dbReference type="EC" id="1.8.4.11"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the MsrA Met sulfoxide reductase family.</text>
    </comment>
    <dbReference type="EC" id="1.8.4.11" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73828.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03672"/>
    <dbReference type="EnsemblBacteria" id="CTQ73828">
        <property type="protein sequence ID" value="CTQ73828"/>
        <property type="gene ID" value="LAX5112_03672"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033744">
        <property type="term" value="F:L-methionine:thioredoxin-disulfide S-oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008113">
        <property type="term" value="F:peptide-methionine (S)-S-oxide reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1060.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01401">
        <property type="entry name" value="MsrA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002569">
        <property type="entry name" value="Met_Sox_Rdtase_MsrA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036509">
        <property type="entry name" value="Met_Sox_Rdtase_MsrA_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01625">
        <property type="entry name" value="PMSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55068">
        <property type="entry name" value="SSF55068"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00401">
        <property type="entry name" value="msrA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PMSR" evidence="5">
        <location>
            <begin position="51"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="active site" evidence="4">
        <location>
            <position position="57"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001063"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001497"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01401"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF01625"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ73828.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="221" mass="23753" checksum="5F46BE6A776E7087" modified="2015-12-09" version="1">MSFMTMLSKKFSLPTSAEALPGRAEAIVPGEAHFVNGNSMMGPYPEGLETVLFGMGCFWGAERLFWTLPGVHVTAVGYAGGSTPNPTYHETCTGRTGHTEAVLVVYDPAHVSLGDLLKVFWENHDPTQGMRQGNDTGTQYRSAIYVPTDAALSEANESMAAYQQALHESGIKNAITTETKKLDEFYFAEDYHQQYLAKNPGGYCGIGGTGVACPTGLSPAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFR2</accession>
    <name>A0A0M7AFR2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Glutamate dehydrogenase</fullName>
            <ecNumber evidence="2">1.4.1.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">gdhB</name>
        <name evidence="4" type="ORF">LAX5112_03693</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>H2O + L-glutamate + NAD(+) = 2-oxoglutarate + H(+) + NADH + NH4(+)</text>
            <dbReference type="Rhea" id="RHEA:15133"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16810"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="EC" id="1.4.1.2"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="1.4.1.2" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ73918.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673034.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03693"/>
    <dbReference type="EnsemblBacteria" id="CTQ73918">
        <property type="protein sequence ID" value="CTQ73918"/>
        <property type="gene ID" value="LAX5112_03693"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004352">
        <property type="term" value="F:glutamate dehydrogenase (NAD+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019551">
        <property type="term" value="P:glutamate catabolic process to 2-oxoglutarate"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046346">
        <property type="entry name" value="Aminiacid_DH-like_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028971">
        <property type="entry name" value="NAD-GDH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007780">
        <property type="entry name" value="NAD_Glu_DH_bac"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43403">
        <property type="entry name" value="PTHR43403"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05088">
        <property type="entry name" value="Bac_GDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF036761">
        <property type="entry name" value="GDH_Mll4104"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53223">
        <property type="entry name" value="SSF53223"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 4" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012896"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ73918.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="1603" mass="179789" checksum="8B61960681656658" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGB9</accession>
    <name>A0A0M7AGB9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="13">Cytochrome bd-II oxidase subunit 1</fullName>
            <ecNumber evidence="13">1.10.3.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">appC</name>
        <name evidence="13" type="ORF">LAX5112_03554</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="12">Cell inner membrane</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 12">Belongs to the cytochrome ubiquinol oxidase subunit 1 family.</text>
    </comment>
    <dbReference type="EC" id="1.10.3.-" evidence="13"/>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73466.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672916.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03554"/>
    <dbReference type="EnsemblBacteria" id="CTQ73466">
        <property type="protein sequence ID" value="CTQ73466"/>
        <property type="gene ID" value="LAX5112_03554"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070069">
        <property type="term" value="C:cytochrome complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
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        </location>
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        </source>
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        </source>
    </evidence>
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        <source>
            <dbReference type="EMBL" id="CTQ73466.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="458" mass="50341" checksum="9A65B58542503809" modified="2015-12-09" version="1">MEELLLSRIQFAANISFHILFPTITIALGWVLLFFKLRFNATGDDRWMAAYMFWVKIFALSFGLGVVSGITMSFQFGTNWPGFMETVGNVAGPLLAYEVLTAFFLEAAFLGIMLFGASRVPNWLHTLATFLVAFGTTVSAFWILVLNSWMHTPTGFELRDGIVHATDWWAIIFNPSMPYRLAHMLLASGLTVAFLILGISAFRRLIGDQSKGVRVTFKTGAWMAAILIPVQIYAGDLHGLNTLENQPQKVAAMEGNWDTSSHVPLLLFALPDEEKRQNNFEIGIPSGASLILKHDPAGVVPGLNDFYAEDGTALHPPVAPVFWSFRVMVGTGVLMLVMSWATVIMMRRNRGVDGLNPWLLRGLVGMTFSGWLATLAGWYTTEIGRQPWLVQGVLTTEAAVADVPAPMVATTLAAYLIVYAVLLVAYITVIFRLARKASNPEDTRPHSGAAQVALVPAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AH41</accession>
    <name>A0A0M7AH41_9HYPH</name>
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        <submittedName>
            <fullName evidence="6">G3-ADH subunit II</fullName>
        </submittedName>
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        <name evidence="6" type="primary">adhB</name>
        <name evidence="6" type="ORF">LAX5112_03374</name>
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        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
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                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
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            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
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    </dbReference>
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        <property type="component" value="Unassembled WGS sequence"/>
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    </dbReference>
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        </location>
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        </location>
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        </source>
    </evidence>
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        <source>
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        </source>
    </evidence>
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        </source>
    </evidence>
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        <source>
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        </source>
    </evidence>
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        <source>
            <dbReference type="PROSITE" id="PS51007"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="EMBL" id="CTQ72934.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="287" mass="30403" checksum="B2C65F4FAB6376BF" modified="2015-12-09" version="1">MRNTIINIFRISGSFAAAALFLGIGAAGAEPTLERGRYLVEGPAGCGNCHTPQGPDGPVADMGLAGMMVEKNDMFTAIASNITPGSRVADWTDEQLGRAIREGIRPDGSIVGPPMPFGLYKGISDDDLMSMVMYLRQVPAVDHDPGQSVYNIPLPPAYGPPIISVAEVPQGVTLEYGAYLAGPIAHCTECHTTFGPKGPMFDTHLGAGGFEFHGPWGVSIAPNITPTRLAQYSDTELDGMIRKGVQPDGARMLPPMPYGYLAKMTDDDAAAMILYLRSLPPLPDGGQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHQ9</accession>
    <name>A0A0M7AHQ9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Inner membrane protein YbaL</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ybaL</name>
        <name evidence="7" type="ORF">LAX5112_03441</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
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        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000014">
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    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ73154">
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        <property type="gene ID" value="LAX5112_03441"/>
    </dbReference>
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        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
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        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006813">
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        <property type="project" value="InterPro"/>
    </dbReference>
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    </dbReference>
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    </dbReference>
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        <property type="entry name" value="Na+/solute_symporter_sf"/>
    </dbReference>
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        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
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        <property type="entry name" value="RCK_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00999">
        <property type="entry name" value="Na_H_Exchanger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02254">
        <property type="entry name" value="TrkA_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51201">
        <property type="entry name" value="RCK_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0406">Ion transport</keyword>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="13"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="35"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="59"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
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            <end position="112"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
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            <end position="139"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
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            <end position="179"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
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            <end position="210"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="222"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
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            <end position="296"/>
        </location>
    </feature>
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            <end position="325"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="332"/>
            <end position="355"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="361"/>
            <end position="380"/>
        </location>
    </feature>
    <feature type="domain" description="RCK N-terminal" evidence="6">
        <location>
            <begin position="417"/>
            <end position="545"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51201"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ73154.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="574" mass="60250" checksum="7E54344F32EFD885" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHZ3</accession>
    <name>A0A0M7AHZ3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03961</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74755.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673261.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74755">
        <property type="protein sequence ID" value="CTQ74755"/>
        <property type="gene ID" value="LAX5112_03961"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809339" evidence="1">
        <location>
            <begin position="28"/>
            <end position="107"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74755.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="107" mass="11464" checksum="5E79A8F5E42B61DA" modified="2015-12-09" version="1">MMSQLSARMSVFAAAALAIGFSAAAHADDAISKVKAAAPLAVCEITPKENGKAYVIWHLTAFDADGTRYYRAITSNLIELIVKPDGSIQSDANPCTNELTFYSSSYR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIR2</accession>
    <name>A0A0M7AIR2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Stalked cell differentiation-controlling protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">pleD_5</name>
        <name evidence="4" type="ORF">LAX5112_03828</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74332.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03828"/>
    <dbReference type="EnsemblBacteria" id="CTQ74332">
        <property type="protein sequence ID" value="CTQ74332"/>
        <property type="gene ID" value="LAX5112_03828"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01949">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000160">
        <property type="entry name" value="GGDEF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00990">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00267">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00254">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50887">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="2">
        <location>
            <begin position="3"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="domain" description="Response regulatory" evidence="2">
        <location>
            <begin position="126"/>
            <end position="243"/>
        </location>
    </feature>
    <feature type="domain" description="GGDEF" evidence="3">
        <location>
            <begin position="287"/>
            <end position="418"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="1">
        <location>
            <position position="55"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="1">
        <location>
            <position position="176"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ74332.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="419" mass="47114" checksum="754366A26169E503" modified="2015-12-09" version="1">MRTMLLVEDASFFEKAIVDRLQDIGRHQIMVARNYREAESCLDMPICEPDLALVDLTLPDAPNGEIVDLCRNRNIPTIIFTSKFDNEVREKALAKGVIDYVLKDTPASLDYVAELLKRLSYNPKIGILILDDASVDRERIAQITSHHLYQTYQASTPAEALQMLRDHPHIRLVLADYYMPDEDGFAFLKTVRRKYSRERLSVIGMSSLSNSDNRIRFLKYGAADFIDKSYAPEEILLRISLNLDMMDRIAELNTLAMQDALTGVHNRHFLFTKAVKQIESWTHSGGKASWIAVFDLDSFKQINDEHGHDVGDSVLLGFARQLRALAGPEDMIIRLGGDEFCMIFRSETRDSLTLKLAGFMKSLSTHPIRHSGTDLLCQTSVGIAKLEGGEISDALSIADKHLYASKRNGFEMLAVAADG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJV4</accession>
    <name>A0A0M7AJV4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">NADPH-dependent 7-cyano-7-deazaguanine reductase</fullName>
            <ecNumber evidence="1">1.7.1.13</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="1">7-cyano-7-carbaguanine reductase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="1">NADPH-dependent nitrile oxidoreductase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="1">PreQ(0) reductase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="1 2" type="primary">queF</name>
        <name evidence="2" type="ORF">LAX5112_03674</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>7-aminomethyl-7-carbaguanine + 2 NADP(+) = 7-cyano-7-deazaguanine + 3 H(+) + 2 NADPH</text>
            <dbReference type="Rhea" id="RHEA:13409"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:45075"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="ChEBI" id="CHEBI:58703"/>
            <dbReference type="EC" id="1.7.1.13"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1">tRNA modification; tRNA-queuosine biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily.</text>
    </comment>
    <dbReference type="EC" id="1.7.1.13" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ73864.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673021.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03674"/>
    <dbReference type="EnsemblBacteria" id="CTQ73864">
        <property type="protein sequence ID" value="CTQ73864"/>
        <property type="gene ID" value="LAX5112_03674"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00392"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046857">
        <property type="term" value="F:oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033739">
        <property type="term" value="F:preQ1 synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008616">
        <property type="term" value="P:queuosine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1130.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00818">
        <property type="entry name" value="QueF_type1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043133">
        <property type="entry name" value="GTP-CH-I_C/QueF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029500">
        <property type="entry name" value="QueF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016856">
        <property type="entry name" value="QueF_type1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14489">
        <property type="entry name" value="QueF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF027377">
        <property type="entry name" value="Nitrile_oxidored_QueF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03139">
        <property type="entry name" value="QueF-II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="1" id="KW-0521">NADP</keyword>
    <keyword evidence="1 2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="1" id="KW-0671">Queuosine biosynthesis</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Substrate binding" evidence="1">
        <location>
            <begin position="75"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="1">
        <location>
            <begin position="94"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="active site" description="Thioimide intermediate" evidence="1">
        <location>
            <position position="53"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="1">
        <location>
            <position position="60"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00818"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73864.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="155" mass="17345" checksum="0860E9872F7314A6" modified="2015-12-09" version="1">MSDKSIYENLTQLGASTELPDSPENAVLEKVPNPQAGTKYMVRFVAPEFTSLCPLTSAPDFAHLVIDYVPKDFLVESKSLKLFLGSFRNHGAFHEDCTVSIGKRLVDLLDPEWLRIGGYWYPRGGIPIDVFYQTGPAPEEVWIPEQGVQPYRGRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AK51</accession>
    <name>A0A0M7AK51_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Putative S-adenosylmethionine-dependent methyltransferase/MSMEI_2290</fullName>
            <ecNumber evidence="1">2.1.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04042</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.1.1.-" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ74931.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673331.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04042"/>
    <dbReference type="EnsemblBacteria" id="CTQ74931">
        <property type="protein sequence ID" value="CTQ74931"/>
        <property type="gene ID" value="LAX5112_04042"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ74931.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="239" mass="26401" checksum="EE62E2774CC5AAFC" modified="2015-12-09" version="1">MQSVANTTYSGLQELAFVEESMPEYNEHIVKLISGALRDCEAIVDFGAGIGTLADVVHKQTAVRPRCIEIDESAQSILRHRGYQVSNSLLDLPDQVGGIYSSNVLEHIEDDRGAIRDCFEALQPGGTLVLYLPAFQLLFSGLDRSVGHYRRYSKRDLIHKLQTSGFNIKDCHYVESLGFFASLVVKLVGYDVEGGLGSASSYEFYNKYVFPLSKKIDAVGARHLLGKNIFVVAQKPHAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AK76</accession>
    <name>A0A0M7AK76_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Morphology and auto-aggregation control protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">oxyR_2</name>
        <name evidence="3" type="ORF">LAX5112_03927</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74630.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673225.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74630">
        <property type="protein sequence ID" value="CTQ74630"/>
        <property type="gene ID" value="LAX5112_03927"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00039">
        <property type="entry name" value="HTHLYSR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="5"/>
            <end position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ74630.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="311" mass="34520" checksum="AF2E657742823C44" modified="2015-12-09" version="1">MGYRPSARQLEYFIALAEEGHFGKAAKKCHVSQPTLSNQFKLLEDSVDTTLVERGTTGVRLTAAGERLLPLARHALEVLDDFVTAAEAGRENLGGLIRLGVPSTFGPYFMPYLLPILKSKYPELELYIREDRPVVLEQQILDGTLDCIISPDLAGSERLQVLKLCQEELSLAVPRTHPLSGLEVIPVDMLQGERLLTLSQGFRLHDDVQSLARASGADFRQDYEGTSLDALRQMVSIGMGLCLFPAAYIASEFGKEPDIVLKQVAEMKTRRTICIAWRRDSARHNHFQTLYELSHEAIESMNVPGVEPTAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKK7</accession>
    <name>A0A0M7AKK7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 6">dTDP-4-dehydrorhamnose reductase</fullName>
            <ecNumber evidence="4 6">1.1.1.133</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">rfbD</name>
        <name evidence="8" type="ORF">LAX5112_04223</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 6">
            <text>dTDP-beta-L-rhamnose + NADP(+) = dTDP-4-dehydro-beta-L-rhamnose + H(+) + NADPH</text>
            <dbReference type="Rhea" id="RHEA:21796"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57510"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="ChEBI" id="CHEBI:62830"/>
            <dbReference type="EC" id="1.1.1.133"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="6">Binds 1 Mg(2+) ion per monomer.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2 6">Carbohydrate biosynthesis; dTDP-L-rhamnose biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 6">Belongs to the dTDP-4-dehydrorhamnose reductase family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.133" evidence="4 6"/>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75419.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673460.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000021.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04223"/>
    <dbReference type="EnsemblBacteria" id="CTQ75419">
        <property type="protein sequence ID" value="CTQ75419"/>
        <property type="gene ID" value="LAX5112_04223"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00124"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008831">
        <property type="term" value="F:dTDP-4-dehydrorhamnose reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019305">
        <property type="term" value="P:dTDP-rhamnose biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005913">
        <property type="entry name" value="dTDP_dehydrorham_reduct"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029903">
        <property type="entry name" value="RmlD-like-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10491">
        <property type="entry name" value="PTHR10491"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04321">
        <property type="entry name" value="RmlD_sub_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01214">
        <property type="entry name" value="rmlD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0521">NADP</keyword>
    <keyword evidence="6 8" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RmlD_sub_bind" evidence="7">
        <location>
            <begin position="3"/>
            <end position="289"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000079"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004781"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010944"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00017099"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU364082"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF04321"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ75419.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="298" mass="31709" checksum="BB7D086C35849F99" modified="2015-12-09" version="1">MTRILITGGTGQVGGALGKLSWPDGTELVLPSRAELDLDNADQIGSYVRYGGFDAIISSGAYTAVDKAEDDLLTAFKVNGLAPAAFAEAAKELDIPLVHISTDYVFDGGKTGRYVETDPIDPQGVYGASKAAGELAIQSSGCRHVILRTAWVFSAIGANFVKTMIRLADRPQLTVVDDQTGCPTAAPDIARAAQTIVLRQLTDKDAPSGVYHYCGYAAVTWFGFASEIFRHLEARGLAVPAVAPIPTRDYPTPAKRPANSALDTSRLTQDFGIEPCQWRAALASTVEELMGDKEKGLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKQ1</accession>
    <name>A0A0M7AKQ1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04072</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ74986.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008193564.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04072"/>
    <dbReference type="EnsemblBacteria" id="CTQ74986">
        <property type="protein sequence ID" value="CTQ74986"/>
        <property type="gene ID" value="LAX5112_04072"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ74986.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="152" mass="17130" checksum="C9D6AB027F70372F" modified="2015-12-09" version="1">MIKMLVAGVWMSIAMLISGYGTAKFISAQNQTNNQEETAYVGLDYETLKPVNVPILFEGALQGYVVAKLVFTADGDTLRKLPVPPHPFLVDEAFRALYADETLDFRNLERYDLDGLTEHLKTVTNKRIGQKVVQDVLVEEFNYFDKADVLSH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKS1</accession>
    <name>A0A0M7AKS1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Flagellar hook-associated protein 1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">flgK</name>
        <name evidence="8" type="ORF">LAX5112_04083</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Bacterial flagellum</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Secreted</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the flagella basal body rod proteins family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ75006.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673354.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04083"/>
    <dbReference type="EnsemblBacteria" id="CTQ75006">
        <property type="protein sequence ID" value="CTQ75006"/>
        <property type="gene ID" value="LAX5112_04083"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009424">
        <property type="term" value="C:bacterial-type flagellum hook"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005198">
        <property type="term" value="F:structural molecule activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044780">
        <property type="term" value="P:bacterial-type flagellum assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010930">
        <property type="entry name" value="Flg_bb/hook_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002371">
        <property type="entry name" value="FlgK"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30033">
        <property type="entry name" value="PTHR30033"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06429">
        <property type="entry name" value="Flg_bbr_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02492">
        <property type="entry name" value="flgK_ends"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0975">Bacterial flagellum</keyword>
    <keyword evidence="8" id="KW-0966">Cell projection</keyword>
    <keyword evidence="8" id="KW-0969">Cilium</keyword>
    <keyword evidence="8" id="KW-0282">Flagellum</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0964">Secreted</keyword>
    <feature type="domain" description="Flg_bbr_C" evidence="7">
        <location>
            <begin position="440"/>
            <end position="477"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004365"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009677"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00016244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023143"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF06429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ75006.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="482" mass="50312" checksum="C4A697E8A1CC3A90" modified="2015-12-09" version="1">MSLSVALQVAQSALAARQTESSVIARNITGAQEPGFSKKSVQLSTMYTSSGQAGGLRVNGVARMADSALYASLLTSTSVGTSQQAKLDGITRMAETIGDTELETSPAALLGELQKTLQNYASDPNNSVMAQDTLQSAKNMAASLRSSSDLVQEVRANADSDMATSVREINSLLGELENLNSTIVKGTQNGADVTDALDDRDQVLLALSEEIGIKTIDRANGDIVVYTDSGVTLFETSAREVSFAPTTTYSPGTVGSAVIVDGVPVTGPGAIMPISSGRLHGLAELRDDTAVTYQSQLDEIARGVIEAFGESNGDAGLFTWSGAPAIPPGATHSVGLAADIIVNPNADPDQGGSLDRIRDGFSVAYNPAGDAGFSARLQELVGAFDTSRTFAGSVELDPDASLNSFAGSSVSWLENGRKTLTKNVEIQSVIVGRTAENLSNTTGVNIDEELTLLLEVERAYAAASRLITAVDTMLEELMMATR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AL29</accession>
    <name>A0A0M7AL29_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="12">Lipid A export ATP-binding/permease protein MsbA</fullName>
            <ecNumber evidence="12">3.6.3.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">msbA_3</name>
        <name evidence="12" type="ORF">LAX5112_04375</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.-" evidence="12"/>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75828.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673594.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000023.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04375"/>
    <dbReference type="EnsemblBacteria" id="CTQ75828">
        <property type="protein sequence ID" value="CTQ75828"/>
        <property type="gene ID" value="LAX5112_04375"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008643">
        <property type="term" value="P:carbohydrate transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1560.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011527">
        <property type="entry name" value="ABC1_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036640">
        <property type="entry name" value="ABC1_TM_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039421">
        <property type="entry name" value="Type_1_exporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24221">
        <property type="entry name" value="PTHR24221"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00664">
        <property type="entry name" value="ABC_membrane"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90123">
        <property type="entry name" value="SSF90123"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50929">
        <property type="entry name" value="ABC_TM1F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 8 12" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="12" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="4 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0762">Sugar transport</keyword>
    <keyword evidence="3 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="49"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="90"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="170"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="193"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="280"/>
            <end position="300"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="11">
        <location>
            <begin position="50"/>
            <end position="337"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="10">
        <location>
            <begin position="371"/>
            <end position="610"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="404"/>
            <end position="411"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022597"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ75828.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="617" mass="67178" checksum="A7CCFECB8EA0B269" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AL33</accession>
    <name>A0A0M7AL33_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Demethylspheroidene O-methyltransferase</fullName>
            <ecNumber evidence="5">2.1.1.210</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">crtF_2</name>
        <name evidence="5" type="ORF">LAX5112_04165</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.210" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75261.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04165"/>
    <dbReference type="EnsemblBacteria" id="CTQ75261">
        <property type="protein sequence ID" value="CTQ75261"/>
        <property type="gene ID" value="LAX5112_04165"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043803">
        <property type="term" value="F:hydroxyneurosporene-O-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008171">
        <property type="term" value="F:O-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031725">
        <property type="entry name" value="ASMT_dimerisation"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016461">
        <property type="entry name" value="COMT-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001077">
        <property type="entry name" value="O_MeTrfase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11746">
        <property type="entry name" value="PTHR11746"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16864">
        <property type="entry name" value="Dimerisation2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00891">
        <property type="entry name" value="Methyltransf_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005739">
        <property type="entry name" value="O-mtase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51683">
        <property type="entry name" value="SAM_OMT_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 5" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="2 5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Dimerisation2" evidence="4">
        <location>
            <begin position="13"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="domain" description="Methyltransf_2" evidence="3">
        <location>
            <begin position="132"/>
            <end position="319"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="199"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01020"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00891"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF16864"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ75261.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="340" mass="36542" checksum="E4414C2D75626F04" modified="2015-12-09" version="1">MSAAKCLESAEDISDIAFGFMGSKALFSALNSDVFSLLSEKTLLPSQVAEGSNLDAERATTLLTALTALGLVRRDGDGFTNSPAAEAFLVKGKKYDFGDYLRFQIDRQMYPFMTQLNDALEGTLEEEQVASYEEWFSDAQEAELYSQSQHAGSLGPGRSLAKLVDLSSVRKLLDIGGGTGAFSISLCKAYPGLGSTILDFPNVAEVGKGFVEAEGLENRITYQPGNALKDTWPAQADAVLMSYLFSGVPGASIPGLVRKSMDTLTPGGTYMVHDFMVDESREGPKLAALWQLQHTAFNPEAKSITSTYVSGLMEAAGFKDVTIKEMIPGMTSLVFGRKPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALN0</accession>
    <name>A0A0M7ALN0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04234</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75441.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673470.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000021.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75441">
        <property type="protein sequence ID" value="CTQ75441"/>
        <property type="gene ID" value="LAX5112_04234"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.150.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043708">
        <property type="entry name" value="DUF5648"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001343">
        <property type="entry name" value="Hemolysn_Ca-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011049">
        <property type="entry name" value="Serralysin-like_metalloprot_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18885">
        <property type="entry name" value="DUF5648"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00353">
        <property type="entry name" value="HemolysinCabind"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="216"/>
            <end position="237"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75441.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="545" mass="55702" checksum="5017D2B13A6F21FF" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AM16</accession>
    <name>A0A0M7AM16_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative hydrolase YxeP</fullName>
            <ecNumber evidence="3">3.-.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yxeP_1</name>
        <name evidence="3" type="ORF">LAX5112_03983</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.-.-.-" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74813.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673277.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03983"/>
    <dbReference type="EnsemblBacteria" id="CTQ74813">
        <property type="protein sequence ID" value="CTQ74813"/>
        <property type="gene ID" value="LAX5112_03983"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017439">
        <property type="entry name" value="Amidohydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036264">
        <property type="entry name" value="Bact_exopeptidase_dim_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002933">
        <property type="entry name" value="Peptidase_M20"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011650">
        <property type="entry name" value="Peptidase_M20_dimer"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11014">
        <property type="entry name" value="PTHR11014"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07687">
        <property type="entry name" value="M20_dimer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01546">
        <property type="entry name" value="Peptidase_M20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005962">
        <property type="entry name" value="Pept_M20D_amidohydro"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55031">
        <property type="entry name" value="SSF55031"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01891">
        <property type="entry name" value="amidohydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="M20_dimer" evidence="2">
        <location>
            <begin position="189"/>
            <end position="283"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07687"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ74813.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="390" mass="41762" checksum="B1A1E56A47B64F7F" modified="2015-12-09" version="1">MPIVNRLADLADEITAWRRDFHENPEILYETVRTSGKVAELLESFGLDEVVTGIGKTGVVGVIKGKNGGTGKTIGLRADMDALPIEEITGKPYASKVPGKMHACGHDGHTAMLLGAAKYLSETRNFDGTVVVIFQPAEEGGAGAKAMIDDGLMTRWPIDEVYGMHNFPGMPVGEFAIRKGPIMAATDEFRIVITGRGGHAAKPHETIDPIVTGTNMVNALQTIASRNANPLDSIVVSVTVFNGGNAFNVIPQEVTLRGTVRTLSPQMRDLAEERMNKIVTSVADAFGASAELTFLRGYPVTANHDEQTDFAAGIAETIAGEGKVNRSIDPMMGGEDFSFMLEERPGAFIFAGNGDSAGLHHPAYDFNDELIPVGCSYWVKLVETAMPRAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AM26</accession>
    <name>A0A0M7AM26_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04259</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75492.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75492">
        <property type="protein sequence ID" value="CTQ75492"/>
        <property type="gene ID" value="LAX5112_04259"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="43"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75492.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="251" mass="28625" checksum="A820D83A563FECB8" modified="2015-12-09" version="1">MSRRDFLSLFISQVGHGRMANVAAAVRVIAQVLIVIAKILFMVSDHNALGRRLRGAKEQSVEISTTPLPHQRRIIYIHSMRQKRDKDYYLKRLKAEHPTEYAQVQTGRQDFWNTVYDVGLKRRQKPVNTLKGAWKRCSATDKREFLDWLRSEHGIQTKTSSVSRVTTSPFSKAALPELADSQGRLSTAAIAAISDTMQKLDMKSGDLMKEIGERPLDQSVGSALRRPTRIKNAILLAKLKRWLKKHGYQFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMF0</accession>
    <name>A0A0M7AMF0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">3-oxoacyl-(Acyl carrier protein) synthase III</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_04455</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ76069.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673660.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000024.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04455"/>
    <dbReference type="EnsemblBacteria" id="CTQ76069">
        <property type="protein sequence ID" value="CTQ76069"/>
        <property type="gene ID" value="LAX5112_04455"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016746">
        <property type="term" value="F:acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.47.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013747">
        <property type="entry name" value="ACP_syn_III_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002878">
        <property type="entry name" value="DUF35_OB-fold_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022002">
        <property type="entry name" value="DUF35_Znr_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016039">
        <property type="entry name" value="Thiolase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08541">
        <property type="entry name" value="ACP_syn_III_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12172">
        <property type="entry name" value="DUF35_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01796">
        <property type="entry name" value="OB_aCoA_assoc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53901">
        <property type="entry name" value="SSF53901"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ACP_syn_III_C" evidence="2">
        <location>
            <begin position="216"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="domain" description="DUF35_N" evidence="3">
        <location>
            <begin position="366"/>
            <end position="393"/>
        </location>
    </feature>
    <feature type="domain" description="OB_aCoA_assoc" evidence="1">
        <location>
            <begin position="405"/>
            <end position="462"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01796"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF08541"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF12172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ76069.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="495" mass="53340" checksum="860CFF941738E398" modified="2015-12-09" version="1">MDLGILAFGGYLPQSRLQRAEISKMHGWYNPGLKGLAKGERTIANWDEDAITMAVEAARDCLTGLDRSEISAVFMASTSFPFDDRQNAGVVAEALNLKSQLMTLDLAASQRAGSSGLSVALQAASGAEEPILFAASEQRKTKAASPQEMTYGDGAAAVLVGKGDVVAKFIGAHTVYADFVDHFRGAGHAYDYAWEERWLRDEGYLKIVPEAITAVLEKTGTAASDVTTFCFPAAMKRVASMLASKAGFADEAVADNLQATCGEAGAAHPVIMLVHALETASPGDKILVTGFGQGCDALIFEVTDAIEKLAPRTAVSGHLARRRADTNYARFLTVNGLVTVEEGIRAEVDKQTGLSAHYRNRDMAQRMIGGCCSECGTLQFPKSNVCVNPNCGAIGAQEDHAFADKKARLNSFTADRLTFSPDPPAYYGMIQFEDGGRLMADFTDVDPDQELAVGMPMKLMFRVKDYDRSRGFRRYFWKATPDNDDQASAPSEAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMT1</accession>
    <name>A0A0M7AMT1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Cyclic di-GMP phosphodiesterase Gmr</fullName>
            <ecNumber evidence="4">3.1.4.52</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">gmr_14</name>
        <name evidence="4" type="ORF">LAX5112_04376</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.4.52" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75831.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673595.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000023.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04376"/>
    <dbReference type="EnsemblBacteria" id="CTQ75831">
        <property type="protein sequence ID" value="CTQ75831"/>
        <property type="gene ID" value="LAX5112_04376"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071111">
        <property type="term" value="F:cyclic-guanylate-specific phosphodiesterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd01948">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01949">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.450">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001633">
        <property type="entry name" value="EAL_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035919">
        <property type="entry name" value="EAL_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000160">
        <property type="entry name" value="GGDEF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00563">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00990">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00052">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00267">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141868">
        <property type="entry name" value="SSF141868"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00254">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50883">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50887">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="56"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="80"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="121"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="150"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="195"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="domain" description="GGDEF" evidence="3">
        <location>
            <begin position="279"/>
            <end position="410"/>
        </location>
    </feature>
    <feature type="domain" description="EAL" evidence="2">
        <location>
            <begin position="415"/>
            <end position="668"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ75831.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="689" mass="76791" checksum="EBAA34129758A046" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMZ5</accession>
    <name>A0A0M7AMZ5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Inner membrane protein YohD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yohD</name>
        <name evidence="2" type="ORF">LAX5112_04543</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000025">
        <property type="protein sequence ID" value="CTQ76269.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04543"/>
    <dbReference type="EnsemblBacteria" id="CTQ76269">
        <property type="protein sequence ID" value="CTQ76269"/>
        <property type="gene ID" value="LAX5112_04543"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032816">
        <property type="entry name" value="SNARE_assoc"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09335">
        <property type="entry name" value="SNARE_assoc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="15"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="43"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="95"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="135"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="172"/>
            <end position="192"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76269.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="203" mass="21826" checksum="192FACE448D14128" modified="2015-12-09" version="1">MITKLALQEIPLEQLLDLISSYGPLIYVLLFGYCALKSGALPLFAGFAAQTGALEVGPVATATFLGGYLGDELRFGLVRRYGLPDLSHRPRLQRAFATATSLVTRYGSLYVFMYRYPKGMRTIGALPMGLGPMPWPTFTLLNAASAALWTTVLVGTGYMFGAQVQTAVEGGWGFVSVALLAAMALVIGLAWLRLRRTPLASAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AN84</accession>
    <name>A0A0M7AN84_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">L-glyceraldehyde 3-phosphate reductase</fullName>
            <ecNumber evidence="2">1.1.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">gpr_3</name>
        <name evidence="2" type="ORF">LAX5112_04647</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.1.1.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000027">
        <property type="protein sequence ID" value="CTQ76598.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673829.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000027.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04647"/>
    <dbReference type="EnsemblBacteria" id="CTQ76598">
        <property type="protein sequence ID" value="CTQ76598"/>
        <property type="gene ID" value="LAX5112_04647"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023210">
        <property type="entry name" value="NADP_OxRdtase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036812">
        <property type="entry name" value="NADP_OxRdtase_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00248">
        <property type="entry name" value="Aldo_ket_red"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51430">
        <property type="entry name" value="SSF51430"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aldo_ket_red" evidence="1">
        <location>
            <begin position="16"/>
            <end position="309"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00248"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76598.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="332" mass="35990" checksum="4F220F90A6BD08F6" modified="2015-12-09" version="1">MEKRKLGANGPEVGAIGFGAMSFSDMYGPTNETESHAILDACRDLGVTHLDTANVYGMGKSETAIGTYLKANPGTRDEFVIATKASITRDPEGNRSFDNSAEHLESELDKSLERLGLEYVDLFYAHRRDPRFSPEETAANLGRLVEKGKARAIGLSEVAPSTLRRAMKAFPIAAVQSEYSLSTRFPDLGLVQTCAELGVAMVAFSPVGRSLLTDNPIPSDRIPNLPFLAGNPRFIEPNLSENLRILGAFRRLASEMGTTAAGLANAWLLTRGQHVIPIPGTRSVGHLKECISGATLDLSTADLDRIESVLPVGWAHGDRYSDAQWIGPERYC</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANQ4</accession>
    <name>A0A0M7ANQ4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Putative short-chain type dehydrogenase/reductase</fullName>
            <ecNumber evidence="1">1.1.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04453</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.1.1.-" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ76062.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04453"/>
    <dbReference type="EnsemblBacteria" id="CTQ76062">
        <property type="protein sequence ID" value="CTQ76062"/>
        <property type="gene ID" value="LAX5112_04453"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ76062.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="306" mass="32254" checksum="881A66DA2235F77F" modified="2015-12-09" version="1">MSDKALLDGKVAIVTGAGRGVGREIALLMAQKGASVVVNDLGGTGGGEGEDALPATEVVNEIKAAGGNAVANFDSVTDSAAAQGMVDQAIENFGKLDIVVNNAGIVRDAIFHKMTEDEWDQVIAVHLKGAYNVSRAAATVFREQQSGRMIHMTSTSGLIGNFGQANYAAAKLGMVGLSRSVALDMARYNVTSNAIGPFAWSRLIGTIPIKSEEERIRVERLKSMTPAKVAPLVAALASDAAQNVSGQVFVSRGSEVMLLSQPRPVRSMARPDGWTPESILEHAFPAFSSTLVPLERSADVFCWDPV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANT9</accession>
    <name>A0A0M7ANT9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Hydrogenase expression/formation protein HypE</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">hypE</name>
        <name evidence="4" type="ORF">LAX5112_04509</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the HypE family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000025">
        <property type="protein sequence ID" value="CTQ76191.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673708.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000025.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04509"/>
    <dbReference type="EnsemblBacteria" id="CTQ76191">
        <property type="protein sequence ID" value="CTQ76191"/>
        <property type="gene ID" value="LAX5112_04509"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd02197">
        <property type="entry name" value="HypE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.650.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011854">
        <property type="entry name" value="HypE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010918">
        <property type="entry name" value="PurM-like_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036676">
        <property type="entry name" value="PurM-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016188">
        <property type="entry name" value="PurM-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036921">
        <property type="entry name" value="PurM-like_N_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30303">
        <property type="entry name" value="PTHR30303"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00586">
        <property type="entry name" value="AIRS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02769">
        <property type="entry name" value="AIRS_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005644">
        <property type="entry name" value="Hdrgns_mtr_HypE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55326">
        <property type="entry name" value="SSF55326"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56042">
        <property type="entry name" value="SSF56042"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02124">
        <property type="entry name" value="hypE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AIRS" evidence="2">
        <location>
            <begin position="48"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="domain" description="AIRS_C" evidence="3">
        <location>
            <begin position="172"/>
            <end position="317"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006243"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00586"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF02769"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ76191.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="345" mass="35797" checksum="45D1FFAB4ABF8F16" modified="2015-12-09" version="1">MNIQDPTLSARTGSIDMAHGGGGRATAELISDLFQQHLTNPILDQGNDAALLPPAAGRLVMSTDGHVISPIFFPGGDIGSLAVHGTLNDVAMAGAKPLYLTAGFILEEGFPLANLERIVISMARAAEAAGVPVVTGDTKVVEKGKGDGVFITTTGLGVVPDGVHVSVERANPGQAVLLSGSIGDHGVAILSKRENLEFETEIRSDSAALHTLVAGMISVAPGIAVLRDPTRGGLAATLNEIARTAKVGIHLEEDAIPIKPDVRAACELLGLDPLYVANEGKLVCFCEPRDADAVLAAMQAHPLGRDAAMIGTVTEDDAHLVEMETEIGGVRVVDWLAGEQLPRIC</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AP14</accession>
    <name>A0A0M7AP14_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative inner membrane transporter YedA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yedA_2</name>
        <name evidence="3" type="ORF">LAX5112_04540</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000025">
        <property type="protein sequence ID" value="CTQ76261.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673729.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000025.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76261">
        <property type="protein sequence ID" value="CTQ76261"/>
        <property type="gene ID" value="LAX5112_04540"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000620">
        <property type="entry name" value="EamA_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00892">
        <property type="entry name" value="EamA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="38"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="70"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="95"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="127"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="152"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="183"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="215"/>
            <end position="238"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="250"/>
            <end position="265"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="271"/>
            <end position="289"/>
        </location>
    </feature>
    <feature type="domain" description="EamA" evidence="2">
        <location>
            <begin position="13"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="domain" description="EamA" evidence="2">
        <location>
            <begin position="158"/>
            <end position="288"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ76261.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="306" mass="32465" checksum="3868A0E20EE7A11C" modified="2015-12-09" version="1">MTGLRLEFGLLGLLALLWGSSYMWISLALDTIPPLTLITLRVGLASLVLFAILSIRGLHLPTDKKTWRALFIQSIVNSTGPWLLLAWGQQSVDSAVASVLNSTSPLFVFFFSLFLMSGSDRPAGQQLLGALAGIAGIVLIVGTGALESLGGAFVPQVAVLAGAALYGIAAIRGRQFAHMPPLVTAAGTLICSTMTLLPLSLMIDDPWTLQISPQSLWAAGILSVFCTAFAFLIYFRLINTIGPMGTSSQAYLRSGIGVLLGIVFLNETLDLETIAGICLAIFGVVLINWRRPKKQASSKTAQESSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AP79</accession>
    <name>A0A0M7AP79_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">LIV-I protein H</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">livH_11</name>
        <name evidence="7" type="ORF">LAX5112_04295</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000022">
        <property type="protein sequence ID" value="CTQ75593.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008189987.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000022.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04295"/>
    <dbReference type="EnsemblBacteria" id="CTQ75593">
        <property type="protein sequence ID" value="CTQ75593"/>
        <property type="gene ID" value="LAX5112_04295"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001851">
        <property type="entry name" value="ABC_transp_permease"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02653">
        <property type="entry name" value="BPD_transp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="16"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="44"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="66"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="97"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="142"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="191"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="225"/>
            <end position="252"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="273"/>
            <end position="296"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ75593.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="306" mass="31568" checksum="EA7AE2E223313EDB" modified="2015-12-09" version="1">MSLILLIEQILNGLQFGIMLFLMAAGLTLIFGVMGLINLAHGSLYMIGAFCAAAVAGATGSFLLGLIAALAGAAIAGALVELVVIRRLYTKDHLDQVLATFALILIFSEGTRWLFGSFPLFLDIPDALSGPVTLPGGIEYPLYRLTLIIVGLLVAAGLFLLISRTRLGIQIRAGENDREMIAALGVDIAKLYTIVFALGAALAGLAGALVGAIQSVQVGMGEPVLILAFVVIVIGGIGSIKGALIGAILVGLTDTLGGIFLPELMKLFFSPATATSIGSSIASMAIYILMAAVLVLRPTGLFGARA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7API3</accession>
    <name>A0A0M7API3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">D-xylose-binding periplasmic protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">xylF</name>
        <name evidence="3" type="ORF">LAX5112_04488</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ76150.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673696.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000024.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04488"/>
    <dbReference type="EnsemblBacteria" id="CTQ76150">
        <property type="protein sequence ID" value="CTQ76150"/>
        <property type="gene ID" value="LAX5112_04488"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048029">
        <property type="term" value="F:monosaccharide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015753">
        <property type="term" value="P:D-xylose transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025997">
        <property type="entry name" value="SBP_2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013456">
        <property type="entry name" value="XylF"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13407">
        <property type="entry name" value="Peripla_BP_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02634">
        <property type="entry name" value="xylF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809514" evidence="1">
        <location>
            <begin position="24"/>
            <end position="343"/>
        </location>
    </feature>
    <feature type="domain" description="Peripla_BP_4" evidence="2">
        <location>
            <begin position="28"/>
            <end position="283"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13407"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ76150.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="343" mass="35325" checksum="7E23968C4CEC92B3" modified="2015-12-09" version="1">MRKFTTLLAGALVSATALTAAHAEDIVVGVSWSNFQEERWKTDEAAIKSALDAAGAKYISADAQSSSAKQLSDVEALIAQGANALIILAQDAQAIGPAVQAAADEGIPVVGYDRLIEDPRAFYLTFDNVEVGRMQAAAVLAVQPKGNYVMIKGSPTDPNADFLRGGQQEVLQAAIDSGDIKIVGEAYTDGWLPANAQRNMEQILTANDNNVDAVVASNDGTAGGAVAALTAQGMEGTPVSGQDGDHAALNRVARGTQTVSVWKDARDLGKAAGEIAVALANGGEMSSVDGASSWTSPGGTELTAKFLAPMPITKDNLTAVVDAGWISKDDLCQGVENGPAPCN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APP1</accession>
    <name>A0A0M7APP1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_04606</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000027">
        <property type="protein sequence ID" value="CTQ76481.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673793.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000027.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04606"/>
    <dbReference type="EnsemblBacteria" id="CTQ76481">
        <property type="protein sequence ID" value="CTQ76481"/>
        <property type="gene ID" value="LAX5112_04606"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038972">
        <property type="entry name" value="YiaA-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008024">
        <property type="entry name" value="YiaAB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37290">
        <property type="entry name" value="PTHR37290"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05360">
        <property type="entry name" value="YiaAB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="domain" description="YiaAB" evidence="2">
        <location>
            <begin position="12"/>
            <end position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF05360"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ76481.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="93" mass="10428" checksum="ED187403D0B88CF9" modified="2015-12-09" version="1">MQDTQIRHSNNWTVFTMVSFAVAAGMMALGIYNLEASFAAKGFYTMAAIMLVHTSVTLTKTLRDRDEADKLHNRIEDAKTEKLLMDVSKTDPT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APR2</accession>
    <name>A0A0M7APR2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Dimethylsulfonioproprionate demethylase DmdA</fullName>
            <ecNumber evidence="3">2.1.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">dmdA_2</name>
        <name evidence="3" type="ORF">LAX5112_04354</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.1.1.-" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75773.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673576.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000023.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04354"/>
    <dbReference type="EnsemblBacteria" id="CTQ75773">
        <property type="protein sequence ID" value="CTQ75773"/>
        <property type="gene ID" value="LAX5112_04354"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1360.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028896">
        <property type="entry name" value="GCST/YgfZ/DmdA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013977">
        <property type="entry name" value="GCV_T_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006222">
        <property type="entry name" value="GCV_T_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029043">
        <property type="entry name" value="GcvT/YgfZ_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027266">
        <property type="entry name" value="TrmE/GcvT_dom1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43757">
        <property type="entry name" value="PTHR43757"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01571">
        <property type="entry name" value="GCV_T"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08669">
        <property type="entry name" value="GCV_T_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101790">
        <property type="entry name" value="SSF101790"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="GCV_T" evidence="1">
        <location>
            <begin position="28"/>
            <end position="263"/>
        </location>
    </feature>
    <feature type="domain" description="GCV_T_C" evidence="2">
        <location>
            <begin position="291"/>
            <end position="372"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01571"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF08669"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ75773.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="380" mass="41763" checksum="5CF248F05693A5B7" modified="2015-12-09" version="1">MTAAAEFGFGTQIRKSPYFEATVRWGAKAFSVYNHMYIPRDFGDPEQNFWNLVHDAILCDVAVERQVEITGPDAAAFVQMLTPRNLSNMAVGQCKYILITNAAGGLINDPILLRLGENHFWISISDSDVLLWAQGVAINSGMDVTIGEPDVSPLQLQGPKSGMIMQALFGQEIMDLRYYWHREVELDGIPLIVSRTGWSSELGYELYLCDGSRGDELWEKIMAAGVPLGLQPGHTSSIRRIEGGMLSYHADADMQTNPFELCMDRLVDLSMDADFIGKAALQRIREAGVSRKQVGLLIGGAPLRGPNTTFWTVRKDGAAIGKVTSAVYSPRLQQNIALAMVSADCDCLGTELQVDIPEGQEVAVIVEKPFYDPRKMIAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQ60</accession>
    <name>A0A0M7AQ60_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04642</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000027">
        <property type="protein sequence ID" value="CTQ76582.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76582">
        <property type="protein sequence ID" value="CTQ76582"/>
        <property type="gene ID" value="LAX5112_04642"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ76582.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="102" mass="11569" checksum="887361855F7D6EC9" modified="2015-12-09" version="1">MLVDPYSAVFTFDVVNEIEGGTAVKNLPLGQREEPIWRVHRTTDLLCKLCEDWREVSGDRPHNDRNALRTGYGEREHLFVAFRRAPAGAAEWTVGTKERGSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQA8</accession>
    <name>A0A0M7AQA8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">L-cysteate sulfo-lyase</fullName>
            <ecNumber evidence="7">4.4.1.25</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">cuyA</name>
        <name evidence="7" type="ORF">LAX5112_04650</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ACC deaminase/D-cysteine desulfhydrase family.</text>
    </comment>
    <dbReference type="EC" id="4.4.1.25" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000027">
        <property type="protein sequence ID" value="CTQ76606.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673831.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000027.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04650"/>
    <dbReference type="EnsemblBacteria" id="CTQ76606">
        <property type="protein sequence ID" value="CTQ76606"/>
        <property type="gene ID" value="LAX5112_04650"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034011">
        <property type="term" value="F:L-cysteate sulfo-lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008152">
        <property type="term" value="P:metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1100">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027278">
        <property type="entry name" value="ACCD_DCysDesulf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005966">
        <property type="entry name" value="D-Cys_desShydrase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001926">
        <property type="entry name" value="PLP-dep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036052">
        <property type="entry name" value="Trypto_synt_PLP_dependent"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43780">
        <property type="entry name" value="PTHR43780"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00291">
        <property type="entry name" value="PALP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006278">
        <property type="entry name" value="ACCD_DCysDesulf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53686">
        <property type="entry name" value="SSF53686"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01275">
        <property type="entry name" value="ACC_deam_rel"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0456">Lyase</keyword>
    <keyword evidence="3 5" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PALP" evidence="6">
        <location>
            <begin position="23"/>
            <end position="330"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="4">
        <location>
            <position position="89"/>
        </location>
    </feature>
    <feature type="modified residue" description="N6-(pyridoxal phosphate)lysine" evidence="5">
        <location>
            <position position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008639"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR006278-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR006278-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00291"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ76606.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="347" mass="37395" checksum="A3CE63D5AE8295F7" modified="2015-12-09" version="1">MSVATINFKTKPRIDLEPFPRISLCHQPTPIEEMPRLTAHLNGPKLFIKRDDCTGLATGGNKTRKLEFLMGDALRVNADMVVTQGAVQSNHVRQTAAAACQLGLDCHVLLERRVPDRDPAYEETGNVFLDKLFGVTYEFRPDGLDMNAEAEAVTQRLRAEGRQPYFIPGGGSNAIGALGYANCAQEIADQCAETGQTFQWLVMGTGSSGTQAGLVAGFHVLGYDLPVMGVSVRQPYDRQVAAVYATTEKTLKKLGGTSIEKGKIVVDDGYVGEGYGLPAETTLEAIHLTARQEGILLDPVYSAKGMAGLIGLIRKGFFSSDDNVLFLHTGGSTSLFAYEDQILGSMG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQM7</accession>
    <name>A0A0M7AQM7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">DNA primase</fullName>
            <ecNumber evidence="12">2.7.7.101</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12 15" type="primary">dnaG</name>
        <name evidence="15" type="ORF">LAX5112_04712</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="12">RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="12">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="12">Binds 1 zinc ion per monomer.</text>
    </comment>
    <comment type="subunit">
        <text evidence="12">Monomer. Interacts with DnaB.</text>
    </comment>
    <comment type="domain">
        <text evidence="12">Contains an N-terminal zinc-binding domain, a central core domain that contains the primase activity, and a C-terminal DnaB-binding domain.</text>
    </comment>
    <comment type="similarity">
        <text evidence="12">Belongs to the DnaG primase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.101" evidence="12"/>
    <dbReference type="EMBL" id="CXWD01000029">
        <property type="protein sequence ID" value="CTQ76811.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673891.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000029.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04712"/>
    <dbReference type="EnsemblBacteria" id="CTQ76811">
        <property type="protein sequence ID" value="CTQ76811"/>
        <property type="gene ID" value="LAX5112_04712"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000428">
        <property type="term" value="C:DNA-directed RNA polymerase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990077">
        <property type="term" value="C:primosome complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003896">
        <property type="term" value="F:DNA primase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd03364">
        <property type="entry name" value="TOPRIM_DnaG_primases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.580.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.980.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00974">
        <property type="entry name" value="DNA_primase_DnaG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013264">
        <property type="entry name" value="DNA_primase_core_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037068">
        <property type="entry name" value="DNA_primase_core_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006295">
        <property type="entry name" value="DNA_primase_DnaG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036977">
        <property type="entry name" value="DNA_primase_Znf_CHC2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030846">
        <property type="entry name" value="DnaG_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034151">
        <property type="entry name" value="TOPRIM_DnaG_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006171">
        <property type="entry name" value="TOPRIM_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002694">
        <property type="entry name" value="Znf_CHC2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13662">
        <property type="entry name" value="Toprim_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08275">
        <property type="entry name" value="Toprim_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01807">
        <property type="entry name" value="zf-CHC2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00493">
        <property type="entry name" value="TOPRIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00400">
        <property type="entry name" value="ZnF_CHCC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01391">
        <property type="entry name" value="dnaG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50880">
        <property type="entry name" value="TOPRIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 12" id="KW-0235">DNA replication</keyword>
    <keyword evidence="10 12" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="1 12" id="KW-0240">DNA-directed RNA polymerase</keyword>
    <keyword evidence="9" id="KW-0460">Magnesium</keyword>
    <keyword evidence="6 12" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4 12 15" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="2 12" id="KW-0639">Primosome</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="11 12" id="KW-0804">Transcription</keyword>
    <keyword evidence="3 12 15" id="KW-0808">Transferase</keyword>
    <keyword evidence="8 12" id="KW-0862">Zinc</keyword>
    <keyword evidence="7 12" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="Toprim" evidence="14">
        <location>
            <begin position="262"/>
            <end position="344"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="CHC2-type" evidence="12">
        <location>
            <begin position="43"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="13">
        <location>
            <begin position="624"/>
            <end position="649"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022515"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS50880"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="CTQ76811.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="649" mass="73253" checksum="A7545F7C5849E0F5" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AR28</accession>
    <name>A0A0M7AR28_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Arginine-binding extracellular protein ArtP</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">artP</name>
        <name evidence="4" type="ORF">LAX5112_04970</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000037">
        <property type="protein sequence ID" value="CTQ77595.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04970"/>
    <dbReference type="EnsemblBacteria" id="CTQ77595">
        <property type="protein sequence ID" value="CTQ77595"/>
        <property type="gene ID" value="LAX5112_04970"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00062">
        <property type="entry name" value="PBPb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809869" evidence="2">
        <location>
            <begin position="24"/>
            <end position="254"/>
        </location>
    </feature>
    <feature type="domain" description="PBPb" evidence="3">
        <location>
            <begin position="31"/>
            <end position="254"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00062"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ77595.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="254" mass="27537" checksum="E003AA7025B6CFD5" modified="2015-12-09" version="1">MINWKMVSGAGIAVCMLAGQAVAVECPRGGTLIAGASDYRPYQKVDGKEVSGMDFEVIAVVLDKLGCGLETQALPWARHLKGLEDGNVDIASPVSKTEEREVFAHFSSPYVDAQEVLFVPAGKEGEYSSLADFFEKGGKLGTIREYAYGGEFNDLKDKYASQIDDTDSQESNLKKLAAGRIDATLGEVFVVSEDIKRLGFGDKVVGSNVIISSDASYIMFSKKSVPEEFVTAFSEQMQAMKDSGEFDTITAKYK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARP5</accession>
    <name>A0A0M7ARP5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7 15">Aspartokinase</fullName>
            <ecNumber evidence="6 15">2.7.2.4</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="18" type="primary">lysC</name>
        <name evidence="18" type="ORF">LAX5112_04827</name>
    </gene>
    <organism evidence="18 19">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="19" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="19">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 15">
            <text>ATP + L-aspartate = 4-phospho-L-aspartate + ADP</text>
            <dbReference type="Rhea" id="RHEA:23776"/>
            <dbReference type="ChEBI" id="CHEBI:29991"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:57535"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.2.4"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 16">Amino-acid biosynthesis; L-lysine biosynthesis via DAP pathway; (S)-tetrahydrodipicolinate from L-aspartate: step 1/4.</text>
    </comment>
    <comment type="pathway">
        <text evidence="3 16">Amino-acid biosynthesis; L-methionine biosynthesis via de novo pathway; L-homoserine from L-aspartate: step 1/3.</text>
    </comment>
    <comment type="pathway">
        <text evidence="4 16">Amino-acid biosynthesis; L-threonine biosynthesis; L-threonine from L-aspartate: step 1/5.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5 15">Belongs to the aspartokinase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.2.4" evidence="6 15"/>
    <dbReference type="EMBL" id="CXWD01000032">
        <property type="protein sequence ID" value="CTQ77181.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673984.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000032.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04827"/>
    <dbReference type="EnsemblBacteria" id="CTQ77181">
        <property type="protein sequence ID" value="CTQ77181"/>
        <property type="gene ID" value="LAX5112_04827"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00034">
        <property type="reaction ID" value="UER00015"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00050">
        <property type="reaction ID" value="UER00461"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00051">
        <property type="reaction ID" value="UER00462"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004072">
        <property type="term" value="F:aspartate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009089">
        <property type="term" value="P:lysine biosynthetic process via diaminopimelate"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009088">
        <property type="term" value="P:threonine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd04261">
        <property type="entry name" value="AAK_AKii-LysC-BS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1160.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036393">
        <property type="entry name" value="AceGlu_kinase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045865">
        <property type="entry name" value="ACT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002912">
        <property type="entry name" value="ACT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041740">
        <property type="entry name" value="AKii-LysC-BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001048">
        <property type="entry name" value="Asp/Glu/Uridylate_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005260">
        <property type="entry name" value="Asp_kin_monofn"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001341">
        <property type="entry name" value="Asp_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018042">
        <property type="entry name" value="Aspartate_kinase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027795">
        <property type="entry name" value="CASTOR_ACT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001057">
        <property type="entry name" value="Glu/AcGlu_kinase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00696">
        <property type="entry name" value="AA_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01842">
        <property type="entry name" value="ACT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13840">
        <property type="entry name" value="ACT_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000726">
        <property type="entry name" value="Asp_kin"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00474">
        <property type="entry name" value="GLU5KINASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53633">
        <property type="entry name" value="SSF53633"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55021">
        <property type="entry name" value="SSF55021"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00656">
        <property type="entry name" value="asp_kin_monofn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00657">
        <property type="entry name" value="asp_kinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51671">
        <property type="entry name" value="ACT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00324">
        <property type="entry name" value="ASPARTOKINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 16" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="12 14" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="11 15 18" id="KW-0418">Kinase</keyword>
    <keyword evidence="13" id="KW-0457">Lysine biosynthesis</keyword>
    <keyword evidence="10 14" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="19" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9 15 18" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="ACT" evidence="17">
        <location>
            <begin position="275"/>
            <end position="359"/>
        </location>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <begin position="7"/>
            <end position="10"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="47"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="74"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <begin position="173"/>
            <end position="174"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="179"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="184"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <begin position="209"/>
            <end position="210"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000709"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004766"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004986"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00005139"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00010122"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00013059"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00016273"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023154"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="PIRSR" id="PIRSR000726-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="RuleBase" id="RU003448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="RuleBase" id="RU004249"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="PROSITE" id="PS51671"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="EMBL" id="CTQ77181.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="416" mass="44490" checksum="FB51E58EC7B9E5DC" modified="2015-12-09" version="1">MARLVLKFGGTSVADLDRIRNVARHVKREVDAGHQVAVVVSAMSGQTNKLVQFCRDASPLHDAREYDAVVASGEQVTSGLLAIVLQDMGVNARSWQGWQVPIKTDENHGAARIREIDGAFLTERLEQGQVAVLAGFQGISPDNRISTLGRGGSDTSAVAIAAAIKADRCDIYTDVDGVYTTDPRIVPQAQRLDRVSFEEMLEMASLGAKVLQVRSVEMAMVHGVRTFVRSSFDDPDAPQTGQDGLPVGTLICDEDELVEQQVVTGIAYAKDEAQISIRDVADKPGVAQSVFGPLADASINVDMIVQNISPDGKTTDITFTVPEADFARAQKVLEDNRDEIGFQNLEGAADVVKVSVIGIGMRSHAGVAAQCFSGLASKGINIRAITTSEIKISVLIDSAYAELAVRTLHSLYGLDG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AT93</accession>
    <name>A0A0M7AT93_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04709</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000028">
        <property type="protein sequence ID" value="CTQ76784.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76784">
        <property type="protein sequence ID" value="CTQ76784"/>
        <property type="gene ID" value="LAX5112_04709"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ76784.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="100" mass="10980" checksum="1D0BBED01870D800" modified="2015-12-09" version="1">MCDVMARKVCGETRTGGWCLLRGHLNLASINASNDLGQGLQPVKGDVLRHTKIDQAGDLIDTDGTDLLHTFERIGDCAEQPTVFKVAQESKLQDRVQLVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AU35</accession>
    <name>A0A0M7AU35_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Histidine kinase</fullName>
            <ecNumber evidence="3">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="primary">luxQ_3</name>
        <name evidence="14" type="ORF">LAX5112_04863</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000033">
        <property type="protein sequence ID" value="CTQ77293.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04863"/>
    <dbReference type="EnsemblBacteria" id="CTQ77293">
        <property type="protein sequence ID" value="CTQ77293"/>
        <property type="gene ID" value="LAX5112_04863"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00088">
        <property type="entry name" value="HPT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00130">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.160">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021796">
        <property type="entry name" value="DUF3365"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036641">
        <property type="entry name" value="HPT_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001610">
        <property type="entry name" value="PAC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000014">
        <property type="entry name" value="PAS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000700">
        <property type="entry name" value="PAS-assoc_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035965">
        <property type="entry name" value="PAS-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013767">
        <property type="entry name" value="PAS_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008207">
        <property type="entry name" value="Sig_transdc_His_kin_Hpt_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11845">
        <property type="entry name" value="DUF3365"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01627">
        <property type="entry name" value="Hpt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00989">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13426">
        <property type="entry name" value="PAS_9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00086">
        <property type="entry name" value="PAC"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00091">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47226">
        <property type="entry name" value="SSF47226"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55785">
        <property type="entry name" value="SSF55785"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00229">
        <property type="entry name" value="sensory_box"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50894">
        <property type="entry name" value="HPT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50113">
        <property type="entry name" value="PAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50112">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="14" id="KW-0418">Kinase</keyword>
    <keyword evidence="8" id="KW-0472">Membrane</keyword>
    <keyword evidence="5 7" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="14" id="KW-0808">Transferase</keyword>
    <keyword evidence="8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="215"/>
            <end position="233"/>
        </location>
    </feature>
    <feature type="domain" description="PAS" evidence="11">
        <location>
            <begin position="268"/>
            <end position="324"/>
        </location>
    </feature>
    <feature type="domain" description="PAS" evidence="11">
        <location>
            <begin position="524"/>
            <end position="595"/>
        </location>
    </feature>
    <feature type="domain" description="PAC" evidence="12">
        <location>
            <begin position="602"/>
            <end position="652"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="9">
        <location>
            <begin position="670"/>
            <end position="891"/>
        </location>
    </feature>
    <feature type="domain" description="Response regulatory" evidence="10">
        <location>
            <begin position="915"/>
            <end position="1031"/>
        </location>
    </feature>
    <feature type="domain" description="HPt" evidence="13">
        <location>
            <begin position="1061"/>
            <end position="1158"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="7">
        <location>
            <position position="964"/>
        </location>
    </feature>
    <feature type="modified residue" description="Phosphohistidine" evidence="6">
        <location>
            <position position="1100"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022519"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50112"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50113"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS50894"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="CTQ77293.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="1166" mass="127804" checksum="BB6044EA1A834EEC" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AU68</accession>
    <name>A0A0M7AU68_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">dITP/XTP pyrophosphatase</fullName>
            <ecNumber evidence="7">3.6.1.66</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Non-canonical purine NTP pyrophosphatase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">Non-standard purine NTP pyrophosphatase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">Nucleoside-triphosphate diphosphatase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">Nucleoside-triphosphate pyrophosphatase</fullName>
            <shortName evidence="7">NTPase</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">LAX5112_04818</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>H2O + ITP = diphosphate + H(+) + IMP</text>
            <dbReference type="Rhea" id="RHEA:29399"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:58053"/>
            <dbReference type="ChEBI" id="CHEBI:61402"/>
            <dbReference type="EC" id="3.6.1.66"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>H2O + XTP = diphosphate + H(+) + XMP</text>
            <dbReference type="Rhea" id="RHEA:28610"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57464"/>
            <dbReference type="ChEBI" id="CHEBI:61314"/>
            <dbReference type="EC" id="3.6.1.66"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>dITP + H2O = dIMP + diphosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:28342"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:61194"/>
            <dbReference type="ChEBI" id="CHEBI:61382"/>
            <dbReference type="EC" id="3.6.1.66"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="7">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="7">Binds 1 Mg(2+) ion per subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 7 8">Belongs to the HAM1 NTPase family.</text>
    </comment>
    <dbReference type="EC" id="3.6.1.66" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000031">
        <property type="protein sequence ID" value="CTQ77144.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673970.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000031.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04818"/>
    <dbReference type="EnsemblBacteria" id="CTQ77144">
        <property type="protein sequence ID" value="CTQ77144"/>
        <property type="gene ID" value="LAX5112_04818"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035870">
        <property type="term" value="F:dITP diphosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0036220">
        <property type="term" value="F:ITP diphosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017111">
        <property type="term" value="F:nucleoside-triphosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0036222">
        <property type="term" value="F:XTP diphosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009117">
        <property type="term" value="P:nucleotide metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009146">
        <property type="term" value="P:purine nucleoside triphosphate catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00515">
        <property type="entry name" value="HAM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.950.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01405">
        <property type="entry name" value="Non_canon_purine_NTPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020922">
        <property type="entry name" value="dITP/XTP_pyrophosphatase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002637">
        <property type="entry name" value="Ham1p-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029001">
        <property type="entry name" value="ITPase-like_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11067">
        <property type="entry name" value="PTHR11067"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01725">
        <property type="entry name" value="Ham1p_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52972">
        <property type="entry name" value="SSF52972"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00042">
        <property type="entry name" value="TIGR00042"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7 8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5 7" id="KW-0460">Magnesium</keyword>
    <keyword evidence="2 7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6 7" id="KW-0546">Nucleotide metabolism</keyword>
    <keyword evidence="3 7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Substrate binding" evidence="7">
        <location>
            <begin position="15"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="7">
        <location>
            <begin position="162"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="7">
        <location>
            <begin position="197"/>
            <end position="198"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="7">
        <location>
            <position position="76"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="47"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="76"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="77"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="185"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023080"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01405"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU003781"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ77144.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="212" mass="23017" checksum="010C03F3AB405E97" modified="2015-12-09" version="1">MSHRKLEPGKLVVASHNKGKLREINELLQPYGFEVVSAGDLGLPEPEETGTTFEANAEIKAVASATAANLPALADDSGFCVAELNGDPGIYSARWAGPDKDFAMAMRTVEEKLQSAGATTPERRRGSFVAVLCLAWPDGHKEFFRGEVDGQIVWPPRGTQGFGYDPVFQPDGHERTFGEMTSEEKHGWGPDTPALSHRSRAFELFAKACLKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AVC9</accession>
    <name>A0A0M7AVC9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Cysteine rich repeat</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04946</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000036">
        <property type="protein sequence ID" value="CTQ77544.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674087.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000036.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77544">
        <property type="protein sequence ID" value="CTQ77544"/>
        <property type="gene ID" value="LAX5112_04946"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001893">
        <property type="entry name" value="Cys-rich_GLG1_repeat"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00839">
        <property type="entry name" value="Cys_rich_FGFR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809962" evidence="1">
        <location>
            <begin position="29"/>
            <end position="139"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77544.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="139" mass="14501" checksum="9CCA9E1F6542234E" modified="2015-12-09" version="1">MLKFKRLSSAALAIGLTVGSGVIFPASAQGVLEACEPEIVEFCSTVEPGNGRVLSCLYAHETKISRTCGDAFDDIGDVIDGLFFTIGSTLAICDADLQKHCADTRFGQGRLLSCLAEVQADLEPACSGVVAELSGELAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZLH5</accession>
    <name>A0A0M6ZLH5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Autotransporter assembly factor TamA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">tamA</name>
        <name evidence="6" type="ORF">LAX5112_00005</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell outer membrane</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63619.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670073.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00005"/>
    <dbReference type="EnsemblBacteria" id="CTQ63619">
        <property type="protein sequence ID" value="CTQ63619"/>
        <property type="gene ID" value="LAX5112_00005"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009279">
        <property type="term" value="C:cell outer membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000184">
        <property type="entry name" value="Bac_surfAg_D15"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010827">
        <property type="entry name" value="BamA/TamA_POTRA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039910">
        <property type="entry name" value="D15-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034746">
        <property type="entry name" value="POTRA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12815">
        <property type="entry name" value="PTHR12815"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01103">
        <property type="entry name" value="Omp85"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07244">
        <property type="entry name" value="POTRA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51779">
        <property type="entry name" value="POTRA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1134">Transmembrane beta strand</keyword>
    <feature type="domain" description="POTRA" evidence="5">
        <location>
            <begin position="262"/>
            <end position="336"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004442"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022452"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51779"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ63619.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="661" mass="70709" checksum="BA011D8086177BDA" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZLN6</accession>
    <name>A0A0M6ZLN6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Probable alpha-L-glutamate ligase</fullName>
            <ecNumber evidence="7">6.3.2.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">lysX_1</name>
        <name evidence="7" type="synonym">rimK</name>
        <name evidence="10" type="ORF">LAX5112_00030</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="7">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <cofactor evidence="7">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
        <text evidence="7">Binds 2 magnesium or manganese ions per subunit.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the RimK family.</text>
    </comment>
    <dbReference type="EC" id="6.3.2.-" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63679.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670092.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00030"/>
    <dbReference type="EnsemblBacteria" id="CTQ63679">
        <property type="protein sequence ID" value="CTQ63679"/>
        <property type="gene ID" value="LAX5112_00030"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016881">
        <property type="term" value="F:acid-amino acid ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1490.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01552">
        <property type="entry name" value="RimK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011761">
        <property type="entry name" value="ATP-grasp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013651">
        <property type="entry name" value="ATP-grasp_RimK-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013815">
        <property type="entry name" value="ATP_grasp_subdomain_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023533">
        <property type="entry name" value="RimK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041107">
        <property type="entry name" value="Rimk_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004666">
        <property type="entry name" value="RpS6_RimK/Lys_biosynth_LsyX"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08443">
        <property type="entry name" value="RimK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18030">
        <property type="entry name" value="Rimk_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00768">
        <property type="entry name" value="rimK_fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50975">
        <property type="entry name" value="ATP_GRASP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7 10" id="KW-0436">Ligase</keyword>
    <keyword evidence="7" id="KW-0460">Magnesium</keyword>
    <keyword evidence="6 7" id="KW-0464">Manganese</keyword>
    <keyword evidence="2 7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3 7 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5 7" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ATP-grasp" evidence="9">
        <location>
            <begin position="104"/>
            <end position="287"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="141"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="178"/>
            <end position="179"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="187"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="211"/>
            <end position="213"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="248"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="260"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="262"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00409"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ63679.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="301" mass="32429" checksum="84E0598BBF2344BF" modified="2015-12-09" version="1">MKIAMLARNAKLYSHQRLKEAAETRGHELDIIDTLRCYMNIASRRPEVYYNGEKLTGFDAVIPRIGASVTFYGMAVLRQFEMMGVYPLNESVAIGRSRDKLRSMQLMARDGIGLPVTTFAHDPKQTEEVLRLAGGAPIVIKLLEGTQGIGVVLADSDRSAKSVVEAFRGAGVNIMLQEFIKEAGGTDIRAIVIGGKVVAAMKRTGAEGDFRSNLHRGGSAQVVKLSSEERATAVRAAKSLGLNVCGVDMLRSNHGPVIMEVNSSPGLEGVEKATGLDIAGKIIEYMEKHAKSGATRTKGRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZLP8</accession>
    <name>A0A0M6ZLP8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Serine hydroxymethyltransferase</fullName>
            <ecNumber evidence="8">2.1.2.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">glyA</name>
        <name evidence="8" type="ORF">LAX5112_00033</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 6">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the SHMT family.</text>
    </comment>
    <dbReference type="EC" id="2.1.2.1" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63689.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670095.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00033"/>
    <dbReference type="EnsemblBacteria" id="CTQ63689">
        <property type="protein sequence ID" value="CTQ63689"/>
        <property type="gene ID" value="LAX5112_00033"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004372">
        <property type="term" value="F:glycine hydroxymethyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019264">
        <property type="term" value="P:glycine biosynthetic process from serine"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035999">
        <property type="term" value="P:tetrahydrofolate interconversion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001085">
        <property type="entry name" value="Ser_HO-MeTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039429">
        <property type="entry name" value="SHMT-like_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11680">
        <property type="entry name" value="PTHR11680"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00464">
        <property type="entry name" value="SHMT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000412">
        <property type="entry name" value="SHMT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-0554">One-carbon metabolism</keyword>
    <keyword evidence="5 6" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="SHMT" evidence="7">
        <location>
            <begin position="37"/>
            <end position="408"/>
        </location>
    </feature>
    <feature type="modified residue" description="N6-(pyridoxal phosphate)lysine" evidence="6">
        <location>
            <position position="254"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006376"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022563"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR000412-50"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ63689.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="441" mass="46513" checksum="BD9BF90006E0DA5A" modified="2015-12-09" version="1">MTALERRDWVPDACEAYVQELAARTASNNLEETQARIDALIAENFQIHDRDCFNLNPATNVMNPKAEAALASGLGSRPSLGYPGDKYEMGLEAIEEIEVICAELCAEVFQAKYAEIRVGSGALANLYAFMATCRPGDTIIAPPASIGGHVTHHAAGCAGLYGLDIHEAPVSTDGYTVDLDGLKELAGRVKPQLITIGGSLNLFPHPVREIREIADGCGAKVLFDAAHQCGIIAGKAWPNPLKEGAHMMTMSTYKSLGGPAGGLIVTKEADLAERLDAIAFPGMTANFDAAKSAGLAVTMLDWKAYGEAYAAEMIALSQELAKELHENGATVFGAGKGFTQSHQFAIEAASFGGGQAASKKLRQAGFLACGIGLPIAAVEGDMNGLRIGTPELVRRGVTVKDAPKLAGLIARALTTNDPATLAREVSAYRAEFNDVHFVLQS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZNN4</accession>
    <name>A0A0M6ZNN4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Aminotransferase</fullName>
            <ecNumber evidence="1">2.6.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">alaC</name>
        <name evidence="3" type="ORF">LAX5112_00046</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.6.1.-" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63730.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670107.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00046"/>
    <dbReference type="EnsemblBacteria" id="CTQ63730">
        <property type="protein sequence ID" value="CTQ63730"/>
        <property type="gene ID" value="LAX5112_00046"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008483">
        <property type="term" value="F:transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901605">
        <property type="term" value="P:alpha-amino acid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009058">
        <property type="term" value="P:biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004839">
        <property type="entry name" value="Aminotransferase_I/II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004838">
        <property type="entry name" value="NHTrfase_class1_PyrdxlP-BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00155">
        <property type="entry name" value="Aminotran_1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00105">
        <property type="entry name" value="AA_TRANSFER_CLASS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 3" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="3" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Aminotran_1_2" evidence="2">
        <location>
            <begin position="31"/>
            <end position="382"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU000481"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ63730.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="405" mass="44701" checksum="3318C9C213FED861" modified="2015-12-09" version="1">MEEFHKIKRLPPYVFEQVNRLKAKARAAGADIIDLGMGNPDLATPQHIVDKLTEVVQDPRSHRYSASKGIQGLRKAQASYYGRRFGVKLDPDTQVIATLGSKEGFANMAQAISAPGDVILSPNPSYPIHTFGFLMAGASIRNIPAEPNSSFFEALERAVIHSVPKPIAIILCYPANPTAYCADLDFYKEVVAFARKHNIFILSDLAYSEIYFGDTPPPSVLQVPGAMDVTVEFTSLSKTFSMPGWRMGFAVGNERLIGALGRVKSYLDYGAFTPIQVAATAALNGPDDCIRETRDIYKKRRDVVVESFGRAGWDIPAPEASMFCWAPIPEKFRSLGSLEFSKLLLERADVAVAPGIGFGEYGDGFVRIGLVENEQRLRQAARNVRRFLETAEQKLHNVIPLETSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZNT1</accession>
    <name>A0A0M6ZNT1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 7">S-(hydroxymethyl)glutathione dehydrogenase</fullName>
            <ecNumber evidence="5 7">1.1.1.284</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">flhA_1</name>
        <name evidence="10" type="ORF">LAX5112_00060</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>NAD(+) + S-(hydroxymethyl)glutathione = H(+) + NADH + S-formylglutathione</text>
            <dbReference type="Rhea" id="RHEA:19985"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57688"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:58758"/>
            <dbReference type="EC" id="1.1.1.284"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>NADP(+) + S-(hydroxymethyl)glutathione = H(+) + NADPH + S-formylglutathione</text>
            <dbReference type="Rhea" id="RHEA:19981"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57688"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="ChEBI" id="CHEBI:58758"/>
            <dbReference type="EC" id="1.1.1.284"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="3 7">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="4 7">Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.284" evidence="5 7"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63770.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008194504.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00060"/>
    <dbReference type="EnsemblBacteria" id="CTQ63770">
        <property type="protein sequence ID" value="CTQ63770"/>
        <property type="gene ID" value="LAX5112_00060"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0106322">
        <property type="term" value="F:S-(hydroxymethyl)glutathione dehydrogenase NAD activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0106321">
        <property type="term" value="F:S-(hydroxymethyl)glutathione dehydrogenase NADP activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006069">
        <property type="term" value="P:ethanol oxidation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd08300">
        <property type="entry name" value="alcohol_DH_class_III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013149">
        <property type="entry name" value="ADH-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014183">
        <property type="entry name" value="ADH_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013154">
        <property type="entry name" value="ADH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002328">
        <property type="entry name" value="ADH_Zn_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011032">
        <property type="entry name" value="GroES-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08240">
        <property type="entry name" value="ADH_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00107">
        <property type="entry name" value="ADH_zinc_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50129">
        <property type="entry name" value="SSF50129"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02818">
        <property type="entry name" value="adh_III_F_hyde"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00059">
        <property type="entry name" value="ADH_ZINC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-0520">NAD</keyword>
    <keyword evidence="6 7 10" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="ADH_N" evidence="9">
        <location>
            <begin position="29"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="domain" description="ADH_zinc_N" evidence="8">
        <location>
            <begin position="198"/>
            <end position="330"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001030"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001646"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00010902"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012309"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU362016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00107"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF08240"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ63770.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="370" mass="39309" checksum="C0756014B3AD4203" modified="2015-12-09" version="1">MQVRAAVAVGAGKPLEVTTVNLEGPRAFEVLVEVKATGICHTDEFTLSGADPEGLFPAILGHEGAGVVVEVGKGVTTLKPGDHVIPLYTPECRTCEYCLNPKTNLCQAIRSTQGQGLMPDGSSRFSTLDGDPILHYMGTSTFANYTVVPEIALAKINPDAPFDKVCYIGCGVTTGIGAVINTAKVEIGSRAIVFGLGGIGLNVIQGLRLAGADQIVGVDLNPAKKEMAERFGMTDFVNPSEVEEDLVPYLVNLTKGGADYTFDATGNVNVMRTALESAHKGWGESIIIGVAPAGAEIATRPFQLVTGRVWKGTAFGGARGRTDVPQIVDWYMDGKIEIDPMITHTMPLEDINKGFDLMHKGESIRSVVLY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQB2</accession>
    <name>A0A0M6ZQB2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Aspartoacylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">LAX5112_00031</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63684.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670093.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00031"/>
    <dbReference type="EnsemblBacteria" id="CTQ63684">
        <property type="protein sequence ID" value="CTQ63684"/>
        <property type="gene ID" value="LAX5112_00031"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016811">
        <property type="term" value="F:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016788">
        <property type="term" value="F:hydrolase activity, acting on ester bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004181">
        <property type="term" value="F:metallocarboxypeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007036">
        <property type="entry name" value="Aste_AspA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043795">
        <property type="entry name" value="N-alpha-Ac-DABA-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000834">
        <property type="entry name" value="Peptidase_M14"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04952">
        <property type="entry name" value="AstE_AspA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF039012">
        <property type="entry name" value="ASP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00132">
        <property type="entry name" value="CARBOXYPEPT_ZN_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Peptidase_M14" evidence="5">
        <location>
            <begin position="49"/>
            <end position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS00132"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ63684.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="347" mass="37711" checksum="D14AF5D1621C8757" modified="2015-12-09" version="1">MAPRAAFEIGQYKVPAGSRQTVDVPVSVLSDHTPVTMSVHVVHGKRSGPTVFVSGGVHGDEVIGVEIIRRLLKAPGIAAMRGTLLAIPIVNAFGFINHSRYLPDRRDLNRMFPGSASGPLASRLAHQFMSEIVLRSDLGIDLHSAAIHRINYPQVRVSPDNERTMELAKIFGSPIIMRSPIRDGSLRQAAADAGKDVLLFEAGEGLRFDELSVRAGVAGVLRIMRHFKMLTAKGISKPKSGPWVCRSSKWLRAPMGGLLRIFKADGELVREGTILGAVSDPFGEREQDIIAPFDGVIVGRAVMPVVNEGDAVFHLGRVMSVSRAEGTLENLSNQLEDDPMFDEDEII</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRE1</accession>
    <name>A0A0M6ZRE1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Penicillin-insensitive murein endopeptidase</fullName>
            <ecNumber evidence="3">3.4.24.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">mepA_2</name>
        <name evidence="3" type="ORF">LAX5112_00596</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.4.24.-" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65349.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00596"/>
    <dbReference type="EnsemblBacteria" id="CTQ65349">
        <property type="protein sequence ID" value="CTQ65349"/>
        <property type="gene ID" value="LAX5112_00596"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030288">
        <property type="term" value="C:outer membrane-bounded periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004252">
        <property type="term" value="F:serine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1380.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009045">
        <property type="entry name" value="Hedgehog_sig/DD-Pept_Zn-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005073">
        <property type="entry name" value="Peptidase_M74"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03411">
        <property type="entry name" value="Peptidase_M74"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55166">
        <property type="entry name" value="SSF55166"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809227" evidence="2">
        <location>
            <begin position="34"/>
            <end position="360"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ65349.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="360" mass="39361" checksum="65AC107E82A69F84" modified="2015-12-09" version="1">MTHRNFASRKKNTLKAIVFAFGALPLLPLTGVAAEPVPSAKPGTVNPPTASAVQKVAGIPIPAEKRAVPEGYQPSKPKLVLRGSQPAKDYFGYVDGPAPLKARAIGSYAKGCLAGGSMLPTDGPTWQAMRLSRNRNWGHPELIDFLKDLAKDAPGLGWNGLLVGDLAQPRGGPMVSGHASHQIGLDADIWLTEMPQRRLTPEEREQISAISMLKGRLDVKGADRRVDSKKWTDIHARLIRRAASDKRVARIFVNPTIKKALCEFETSRDRAWLRKVRPWWGHHYHFHVRLSCPSGSGGCKNQNPPPPGDGCDEHLTYWLSDEPWVPKNPPKAGEKPKIVKKRPMALAALPAACQSVLTAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRS7</accession>
    <name>A0A0M6ZRS7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Succinate-semialdehyde dehydrogenase [NADP(+)]</fullName>
            <ecNumber evidence="5">1.2.1.79</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">gabD_3</name>
        <name evidence="5" type="ORF">LAX5112_00488</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="3">Belongs to the aldehyde dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.2.1.79" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65037.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670439.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ65037">
        <property type="protein sequence ID" value="CTQ65037"/>
        <property type="gene ID" value="LAX5112_00488"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0036243">
        <property type="term" value="F:succinate-semialdehyde dehydrogenase (NADP+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.309.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.605.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016161">
        <property type="entry name" value="Ald_DH/histidinol_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016163">
        <property type="entry name" value="Ald_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029510">
        <property type="entry name" value="Ald_DH_CS_GLU"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016162">
        <property type="entry name" value="Ald_DH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015590">
        <property type="entry name" value="Aldehyde_DH_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00171">
        <property type="entry name" value="Aldedh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53720">
        <property type="entry name" value="SSF53720"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00687">
        <property type="entry name" value="ALDEHYDE_DEHYDR_GLU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 3 5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aldedh" evidence="4">
        <location>
            <begin position="17"/>
            <end position="476"/>
        </location>
    </feature>
    <feature type="active site" evidence="2">
        <location>
            <position position="254"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU003345"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ65037.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="481" mass="51728" checksum="7D3E901B207CBDAA" modified="2015-12-09" version="1">MDYAVQDFTDLYIDGKWRHGASGDRFDVINPATEEVLASVACAELADADAALKAAEDAFADWAARTPRQRSEVLRKAWELMTTRLDEFAKLITLENGKAGNDARGEATYAAEFFRWFAEEAVRADGLITHAPSSGARIMVQHKPAGIAVLVTPWNYPAAMGTRKIAPALAAGCPVIIKPAGETPLTMLALMPLLEEAGVPKGLVNVLPTKHSGKLVDHLLHDPRVRVVSFTGSTGVGRKLLHSAADQVLKPAMELGGNAPLIVFDDADLDTAVEGAMLAKMRNLGEACTAANRFYIHESVAGAFAEKFTAAMAKLKLGNGLEPDVDVGPLVNRDTQQKVARFVQDAVEKGAKITLGGTIPDGKGFFYPPTVMTDVTETADCVHDEIFGPVAALQTFSDTKDVIRRANDTEYGLVAYVFTEDMKRGLQVCERLDYGMVGLNRGLVSDPAAPFGGTKQSGLGREGGHEGMLEFMETQYISASW</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSG1</accession>
    <name>A0A0M6ZSG1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Putative hydro-lyase LAX5112_00270</fullName>
            <ecNumber evidence="3">4.2.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_00270</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the D-glutamate cyclase family.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.-" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64363.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670251.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00270"/>
    <dbReference type="EnsemblBacteria" id="CTQ64363">
        <property type="protein sequence ID" value="CTQ64363"/>
        <property type="gene ID" value="LAX5112_00270"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01830">
        <property type="entry name" value="Hydro_lyase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009906">
        <property type="entry name" value="D-Glu_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038021">
        <property type="entry name" value="Putative_hydro-lyase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016938">
        <property type="entry name" value="UPF0317"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07286">
        <property type="entry name" value="DUF1445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF029755">
        <property type="entry name" value="UCP029755"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF160920">
        <property type="entry name" value="SSF160920"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3" id="KW-0456">Lyase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007896"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01830"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ64363.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="275" mass="29868" checksum="EB8575BEDBD9828C" modified="2015-12-09" version="1">MQQDLTKFSELAGADMGQVRAAIRSGRYSGHTAGLAHGRLQCNLAILPGEYANAFHEFCQLNPKACPLAGVSNPGEPVIVELGVEVDIRTDAARYNIYRHGKLDQQVSDLNACWQDDLVSFAIGCSFTFENALRLAGVPMRHIDLDRTVPMYRTSIETHQSGPFGGGMVVSMRPIAKERIDEVYEICRKYPLAHGAPVHVGNPAEIGILTIDAPDWGNPVPFEDGEVPVFWACGVTPQVAIMTAKPPLSITHAPGAMLIADVSEQTAPLYPYNDN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="34" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSI9</accession>
    <name>A0A0M6ZSI9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 11">Uracil phosphoribosyltransferase</fullName>
            <ecNumber evidence="3 11">2.4.2.9</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10 11">UMP pyrophosphorylase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="11">UPRTase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11 12" type="primary">upp</name>
        <name evidence="12" type="ORF">LAX5112_00556</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11">Catalyzes the conversion of uracil and 5-phospho-alpha-D-ribose 1-diphosphate (PRPP) to UMP and diphosphate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="11">
            <text>diphosphate + UMP = 5-phospho-alpha-D-ribose 1-diphosphate + uracil</text>
            <dbReference type="Rhea" id="RHEA:13017"/>
            <dbReference type="ChEBI" id="CHEBI:17568"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57865"/>
            <dbReference type="ChEBI" id="CHEBI:58017"/>
            <dbReference type="EC" id="2.4.2.9"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="11">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="11">Binds 1 Mg(2+) ion per subunit. The magnesium is bound as Mg-PRPP.</text>
    </comment>
    <comment type="activity regulation">
        <text evidence="11">Allosterically activated by GTP.</text>
    </comment>
    <comment type="pathway">
        <text evidence="1 11">Pyrimidine metabolism; UMP biosynthesis via salvage pathway; UMP from uracil: step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 11">Belongs to the UPRTase family.</text>
    </comment>
    <dbReference type="EC" id="2.4.2.9" evidence="3 11"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65232.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451420.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00556"/>
    <dbReference type="EnsemblBacteria" id="CTQ65232">
        <property type="protein sequence ID" value="CTQ65232"/>
        <property type="gene ID" value="LAX5112_00556"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00574">
        <property type="reaction ID" value="UER00636"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004845">
        <property type="term" value="F:uracil phosphoribosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044206">
        <property type="term" value="P:UMP salvage"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006223">
        <property type="term" value="P:uracil salvage"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06223">
        <property type="entry name" value="PRTases_typeI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2020">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01218_B">
        <property type="entry name" value="Upp_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000836">
        <property type="entry name" value="PRibTrfase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029057">
        <property type="entry name" value="PRTase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034332">
        <property type="entry name" value="Upp_B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005765">
        <property type="entry name" value="Ura_phspho_trans"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53271">
        <property type="entry name" value="SSF53271"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01091">
        <property type="entry name" value="upp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 11" id="KW-0021">Allosteric enzyme</keyword>
    <keyword evidence="5 11 12" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="9 11" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="8 11" id="KW-0460">Magnesium</keyword>
    <keyword evidence="7 11" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 11 12" id="KW-0808">Transferase</keyword>
    <feature type="region of interest" description="5-phospho-alpha-D-ribose 1-diphosphate binding" evidence="11">
        <location>
            <begin position="131"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="region of interest" description="Uracil binding" evidence="11">
        <location>
            <begin position="199"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="79"/>
        </location>
        <ligand>
            <name>5-phospho-alpha-D-ribose 1-diphosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58017"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="104"/>
        </location>
        <ligand>
            <name>5-phospho-alpha-D-ribose 1-diphosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58017"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="194"/>
        </location>
        <ligand>
            <name>uracil</name>
            <dbReference type="ChEBI" id="CHEBI:17568"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="200"/>
        </location>
        <ligand>
            <name>5-phospho-alpha-D-ribose 1-diphosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58017"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011894"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022533"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00031082"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01218"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ65232.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="209" mass="22936" checksum="856549C91A767ED6" modified="2015-12-09" version="1">MSGANVISHPLVQHKLTIMRDKGTSTQGFRRLLREISTLLCYEVTRDLPLVRQTIETPLAEMQAPSLAGKKLVFASVLRAGNGLLEGMLDLVPSARVAHVGLYRDPETLEPVEYYFKAPEDLNERLVIVVDPMLATGNSAIAAVDKLKERGANNIRFLCLLASPEGVAKFNEKQPDVPIYTASIDEKLNEKGYIVPGLGDAGDRMYGTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTC2</accession>
    <name>A0A0M6ZTC2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF3291 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00364</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64683.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670351.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ64683">
        <property type="protein sequence ID" value="CTQ64683"/>
        <property type="gene ID" value="LAX5112_00364"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021708">
        <property type="entry name" value="DUF3291"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11695">
        <property type="entry name" value="DUF3291"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF3291" evidence="1">
        <location>
            <begin position="6"/>
            <end position="155"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF11695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64683.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="185" mass="20610" checksum="1A5A1F6A2275F7C5" modified="2015-12-09" version="1">MQSHHLAVYTFNQFIAPYQSESIRGFRDAEPGAFAEMDRASGFIARSGYEGEEGPMSWGPQVFPKCWENSNGDGWAPSTLSVWETIEALMAATYHGHHGDAYRQGSKWHLARHGVPEYVLWWVPAGHQPDWTEAVGRFEDLMDNGPNDRAFSFKKAFAPDGQAVKPDAARVKAIARENQALADIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTK2</accession>
    <name>A0A0M6ZTK2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00390</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64753.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670367.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00390"/>
    <dbReference type="EnsemblBacteria" id="CTQ64753">
        <property type="protein sequence ID" value="CTQ64753"/>
        <property type="gene ID" value="LAX5112_00390"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008318">
        <property type="entry name" value="UCP030820"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06073">
        <property type="entry name" value="DUF934"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF030820">
        <property type="entry name" value="UCP030820"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ64753.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="178" mass="19485" checksum="570F873758253237" modified="2015-12-09" version="1">MATIYKDGEFVEETWVRADSETGPAADGDLLVPVSLFLEAPEAYLSRTDKTALLVEAGEKVGLAAEHLGKFAYVAVAFPSFADGRGFSTARDLREHLNYQGDIRAVGSYILDQVPLARRCGVSSFEISKPEVLKALKAGEWPEVTKYLQPAFGSIEEIPEGTRPWARRSHRDVAIAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTL5</accession>
    <name>A0A0M6ZTL5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Aspartate/alanine antiporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">aspT</name>
        <name evidence="10" type="ORF">LAX5112_00425</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the AAE transporter (TC 2.A.81) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64854.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670391.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00425"/>
    <dbReference type="EnsemblBacteria" id="CTQ64854">
        <property type="protein sequence ID" value="CTQ64854"/>
        <property type="gene ID" value="LAX5112_00425"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006813">
        <property type="term" value="P:potassium ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022457">
        <property type="entry name" value="Asp_Ala_antiprt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036721">
        <property type="entry name" value="RCK_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006512">
        <property type="entry name" value="YidE_YbjL"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06826">
        <property type="entry name" value="Asp-Al_Ex"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF116726">
        <property type="entry name" value="SSF116726"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03802">
        <property type="entry name" value="Asp_Ala_antiprt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01625">
        <property type="entry name" value="YidE_YbjL_dupl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="6"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="34"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="60"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="89"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="159"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="376"/>
            <end position="404"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="410"/>
            <end position="431"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="452"/>
            <end position="470"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="482"/>
            <end position="503"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="538"/>
            <end position="563"/>
        </location>
    </feature>
    <feature type="domain" description="Asp-Al_Ex" evidence="9">
        <location>
            <begin position="16"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="domain" description="Asp-Al_Ex" evidence="9">
        <location>
            <begin position="391"/>
            <end position="559"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009854"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF06826"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ64854.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="569" mass="60024" checksum="E6CCD391805D6A2A" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZU83</accession>
    <name>A0A0M6ZU83_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00778</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65847.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ65847">
        <property type="protein sequence ID" value="CTQ65847"/>
        <property type="gene ID" value="LAX5112_00778"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ65847.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="93" mass="10868" checksum="35800586A2531709" modified="2015-12-09" version="1">MKRFIFLNAFKNLVSCFLFEGRSKRSEVPDPRSENELSRLDLCRMLNWEKQNILRLRIRNSSLSNRSALTRTAQKKSSVFCRLFKKIALVGSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUC7</accession>
    <name>A0A0M6ZUC7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Ribose import ATP-binding protein RbsA</fullName>
            <ecNumber evidence="6">3.6.3.17</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">rbsA_4</name>
        <name evidence="6" type="ORF">LAX5112_00780</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.17" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65852.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670701.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00780"/>
    <dbReference type="EnsemblBacteria" id="CTQ65852">
        <property type="protein sequence ID" value="CTQ65852"/>
        <property type="gene ID" value="LAX5112_00780"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="19"/>
            <end position="256"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="265"/>
            <end position="514"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="51"/>
            <end position="58"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ65852.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="522" mass="56130" checksum="C7C7895E9256EC56" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUN9</accession>
    <name>A0A0M6ZUN9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Ureidoglycolate lyase</fullName>
            <ecNumber evidence="2">4.3.2.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00809</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="4.3.2.3" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65936.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670843.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00809"/>
    <dbReference type="EnsemblBacteria" id="CTQ65936">
        <property type="protein sequence ID" value="CTQ65936"/>
        <property type="gene ID" value="LAX5112_00809"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050385">
        <property type="term" value="F:ureidoglycolate lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.850.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011234">
        <property type="entry name" value="Fumarylacetoacetase-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036663">
        <property type="entry name" value="Fumarylacetoacetase_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01557">
        <property type="entry name" value="FAA_hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56529">
        <property type="entry name" value="SSF56529"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FAA_hydrolase" evidence="1">
        <location>
            <begin position="75"/>
            <end position="280"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01557"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65936.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="293" mass="31259" checksum="532846509865908D" modified="2015-12-09" version="1">MRFIVGTGPGGQGVYLVEGQKAWNLTALDSKVGHDLMGLISGAADLSELVARKDEGASYDLSAITPELPVAAPGKIICLGLNYVDHIKEGGYDVPTYPALFMRSMTSMIPAGAPMVRPSCSEQLDYEAELMVIIGKGGRHISEASALDHVFGYTLFNDGSVREYQRKTHQWTPGKNFDGTGPVGPVVVTPDELPKGAEGLKIESRVGSEILQSATTSDMLWSVARTISTISEYSTLEPGDYLAMGTPPGVGHAKTPQRWLRPGEVVEVEIEGIGICANPIVAEEDVRATEAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUQ0</accession>
    <name>A0A0M6ZUQ0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Proline racemase</fullName>
            <ecNumber evidence="2">5.1.1.4</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00757</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the proline racemase family.</text>
    </comment>
    <dbReference type="EC" id="5.1.1.4" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65790.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670681.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00757"/>
    <dbReference type="EnsemblBacteria" id="CTQ65790">
        <property type="protein sequence ID" value="CTQ65790"/>
        <property type="gene ID" value="LAX5112_00757"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018112">
        <property type="term" value="F:proline racemase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008794">
        <property type="entry name" value="Pro_racemase_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33442">
        <property type="entry name" value="PTHR33442"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05544">
        <property type="entry name" value="Pro_racemase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF029792">
        <property type="entry name" value="Pro_racemase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00028">
        <property type="entry name" value="Proline_Racemase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0413">Isomerase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007529"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65790.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="341" mass="36111" checksum="B3F37805672238EB" modified="2015-12-09" version="1">MRSLKTVHVISCHAEGEVGDVIVGGVAPPPGETLWDQRSFIAQDQTLRNFVLNEPRGGVFRHVNLLVPPKHPEADAAFIIMEPEDTPPMSGSNSICVSTVLLDSGIIEMKEPVTELTLEAPGGLVQVRADCRNGKAERIHVRNVASFADKLSVPLEVEGLGTLTVDTAFGGDSFVVVDAASLGFEIAESEAKDIAHLGVRITNAANEQLGFKHPEMPDWSHISFCAFAGTLSETPTGLAARSAVAIQPGKVDRSPTGTAVSARMALLHSRGQMKAGQTLEATSIIGSTFTGKIGGETSVGGKPGILPEISGRGWITGIHQHMLDPDDPWPTGYRLSDTWGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVT6</accession>
    <name>A0A0M6ZVT6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Type VI secretion-associated protein, family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01134</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66899.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451781.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01134"/>
    <dbReference type="EnsemblBacteria" id="CTQ66899">
        <property type="protein sequence ID" value="CTQ66899"/>
        <property type="gene ID" value="LAX5112_01134"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1730.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017748">
        <property type="entry name" value="TagF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038225">
        <property type="entry name" value="TagF_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09867">
        <property type="entry name" value="TagF_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF029287">
        <property type="entry name" value="UCP029287"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03373">
        <property type="entry name" value="VI_minor_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ66899.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="245" mass="27513" checksum="03DA45A8DF87A48C" modified="2015-12-09" version="1">MHICGFFGKRPAERDFVFEGLPARVTDAWANTVSNWLHACKTAAPQTWHSAYFSAPVWRFALPANHLDDRAWIGLVAGSADTMGRTFPLAVLMSMHVEQFSNDVIFQIDEIMDRLELDLLTFLAGESTRRHFLNSVTNCSADIRATIDEPPYNVAMTLPDLESDEAGLCIPWTDLVASNEVPAHILVWPETEKKKKRSSSPGYWWHEGSPERVSEVCVFSAMPEAAAARGIFMGQWEAQGWRART</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZW14</accession>
    <name>A0A0M6ZW14_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Taurine--pyruvate aminotransferase</fullName>
            <ecNumber evidence="3">2.6.1.77</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">tpa_4</name>
        <name evidence="3" type="ORF">LAX5112_00730</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.6.1.77" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65714.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670662.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00730"/>
    <dbReference type="EnsemblBacteria" id="CTQ65714">
        <property type="protein sequence ID" value="CTQ65714"/>
        <property type="gene ID" value="LAX5112_00730"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008483">
        <property type="term" value="F:transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00610">
        <property type="entry name" value="OAT_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005814">
        <property type="entry name" value="Aminotrans_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00202">
        <property type="entry name" value="Aminotran_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000521">
        <property type="entry name" value="Transaminase_4ab_Lys_Orn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00600">
        <property type="entry name" value="AA_TRANSFER_CLASS_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="1 2" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="3" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU003560"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ65714.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="460" mass="49767" checksum="25D85D78E223C450" modified="2015-12-09" version="1">MDAVLAKNDNSDVIAADKAHVWHHLIQHKTFETVDPRIIVEGKGLRVWDGAGKEHLDGVSGGVWTVNVGYGRETIAEAVRDQLVKMNFFANTLGSVPGALFAERLISKMPGMSRVFYSNSGSEANEKVFKMVRQISKQHHGGKKSKILYRDRDYHGTTITALSAGGQGERSAHYGPFTPGFVAVPHCLEYRNQYDSAEAYGERAADAIEEVILREGPDTIGAICLETMTAGGGVIVPPEGYWERVQEICKRHQILIHLDEVVCGVGRLGTWFGYQQFGIKPDFVTMAKGVASGYAAISCTVTTEEVFDLFKDASGDPLSYFRDISTYAGCAAGPAAALENMRIIEDEGLLENTLSMGARLMENLEGLKEKHAVVGDVRGRGLFAGVELVSDRETKEPADEAKVQAVAGHCMAQGVIIGMTNRALPGFNNTLCLAPALIATADDIDHITSSIDEALTAVFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWU0</accession>
    <name>A0A0M6ZWU0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Thioredoxin-related protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00835</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66004.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670739.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00835"/>
    <dbReference type="EnsemblBacteria" id="CTQ66004">
        <property type="protein sequence ID" value="CTQ66004"/>
        <property type="gene ID" value="LAX5112_00835"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd02951">
        <property type="entry name" value="SoxW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041737">
        <property type="entry name" value="SoxW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012336">
        <property type="entry name" value="Thioredoxin-like_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13098">
        <property type="entry name" value="Thioredoxin_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Thioredoxin-like_fold" evidence="1">
        <location>
            <begin position="54"/>
            <end position="136"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66004.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="198" mass="22395" checksum="9FBD9BA2595BF2AD" modified="2015-12-09" version="1">MHQIIKSFAAAAVCLTLGHTAGLTAPLGEDGLHKQPWFTITFKDIAEDIQTASDEGKRLALVFEQRGCIYCKAMHEKLLSDPEVTDYIKEHFIVVQYNMFGDEEVIDIDGEELTEKTAARKWGYVFTPTIVFLPEDIPEDGTVADSAVATMPGSFGKWTFLNMFRWVNEKGYESDEHFQKYHARIINELRDQGRLGGD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWY7</accession>
    <name>A0A0M6ZWY7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative lipase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01096</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66797.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670963.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01096"/>
    <dbReference type="EnsemblBacteria" id="CTQ66797">
        <property type="protein sequence ID" value="CTQ66797"/>
        <property type="gene ID" value="LAX5112_01096"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006629">
        <property type="term" value="P:lipid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002921">
        <property type="entry name" value="Fungal_lipase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01764">
        <property type="entry name" value="Lipase_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lipase_3" evidence="1">
        <location>
            <begin position="105"/>
            <end position="211"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66797.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="334" mass="35392" checksum="C9C20652389285C5" modified="2015-12-09" version="1">MIAKADSTSDAILMTLAGIAYGAPKDIGRYIEEAEPTASDWQLDWLPSVTDTPPNFAFAAHNTSDGTRVVSIRGTYPNPLSSAYWEDGRQDSPFGTMVSWPGNPEAKISAGTATGFENLKMLANGNGITLQAYLATVPDESPVFVTGHSLGGTLAPVLALWFTDLFPGKSISVATYAGLTPGNSSFAELFGPGTALSGRVRRVYNKLDTVPYGWDNVYATHEFYQPEPQGGAVVSALLLATVARLKLGGYDYTAIGNPIPLDGEVQPPSVSCDLVAYVLENLHQHMPDTYLSLLGAPPLPFSILLGTVVSPRKAADPANTQKALGLSPIFVDKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZX96</accession>
    <name>A0A0M6ZX96_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Type VI secretion protein, family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01137</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66907.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670992.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01137"/>
    <dbReference type="EnsemblBacteria" id="CTQ66907">
        <property type="protein sequence ID" value="CTQ66907"/>
        <property type="gene ID" value="LAX5112_01137"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010263">
        <property type="entry name" value="T6SS_TssK"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35566">
        <property type="entry name" value="PTHR35566"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05936">
        <property type="entry name" value="T6SS_VasE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03353">
        <property type="entry name" value="VI_chp_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ66907.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="444" mass="49349" checksum="832FC6F0C0CC7510" modified="2015-12-09" version="1">MNASGKPLWLEGMFLRPQHLQQYDRWIETNLEHRVKDQAPYSWGVRKLGFDPDALRIGQIQIADADIVFPDGSVFNTSLLHKVAGAREITSEHQGKKIYLAVPLKSVGGLEVGDEAQGKQRYTRHMSEARNTAEADRPPANIAVGTLTARLILEGENLDETANLPIAEIEGVDAQGGVQLSGTFIPPVNFVAASKPLLAHLEEVRSLLRKRGEMMASNAAGQGSSTRNGLMDLMMLGVVNRYEVVIGHLIMSGRHMPEMVYRDLISLIGEISAYGTDTRRPPEIPIYDHRDLRMTYQGLVAVLRNLLSFVVEQNAVSIPLTKREYGIWLGETSDRMVFQARSFVLIAYANVDLETLRKQMPIQIKVGPVEKIRELVNLQLPGIGISPLSVAPRQIPYIQNAVYFSLDTDNELWPQMQTTAAFALHLSGDYPGLGLELWAIHKGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZY72</accession>
    <name>A0A0M6ZY72_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01238</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67156.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01238"/>
    <dbReference type="EnsemblBacteria" id="CTQ67156">
        <property type="protein sequence ID" value="CTQ67156"/>
        <property type="gene ID" value="LAX5112_01238"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006517">
        <property type="entry name" value="Arc_phage_PsiM2_terminase_lsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035421">
        <property type="entry name" value="Terminase_6C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17289">
        <property type="entry name" value="Terminase_6C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01630">
        <property type="entry name" value="psiM2_ORF9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Terminase_6C" evidence="2">
        <location>
            <begin position="328"/>
            <end position="472"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="8"/>
            <end position="22"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF17289"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ67156.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="492" mass="55068" checksum="794A0D4B456717DD" modified="2015-12-09" version="1">MLTAIRAERASRKTEVEKQAEGKRLTSNHLEFTKHFFLEKEGQPFSVSRFHEVICDTLDLVFAGKITRLIINIPPGYGKTELAVINFIAHGFAKNPRARFIHASYAEPLALDNSTKIKDVIALEGYQAHWPVTMRADTKAKGLWRTTAGGHLRAAAAGQPITGFRAGILAEPGFTGALIIDDPLKPDDALSDPTRTFINKRWENTFKSRLAHEAVPVIVIMQRLHIDDFAAHLMENSGEHWHLLKLPVEIDGECEAPSGKVTMIRHGLPSGPLWEQKHSTEQIEILKVNEYVYSGQYGQEPVAEGGNLFKSEHLLRHTELPRLLWRAIYVDTAQKTKERNDFSVFQHWGVAADGKAYLIDQARGRFEAPELETTGITFWNKAKLLDPKQFGTLRKMEIEDKVSGTGLIQTVKRKGIPVIAKQRDKDKYTRALDVVPSVASGLVSVPQDAPWVKAFLNEFMAFPDGTHDDQVDPFIDAVSDMCGLSSYSLDNL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYB4</accession>
    <name>A0A0M6ZYB4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01321</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67307.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67307">
        <property type="protein sequence ID" value="CTQ67307"/>
        <property type="gene ID" value="LAX5112_01321"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67307.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="71" mass="7823" checksum="B4EE5BC2DE99FBCA" modified="2015-12-09" version="1">MAEGIAVALGEGFEDGILVVDEPAIRQHQNRKALVVFAEKLNEVRPRAGPGDAFDIQVCAEIRKGRQHTFH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZ72</accession>
    <name>A0A0M6ZZ72_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01345</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67350.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67350">
        <property type="protein sequence ID" value="CTQ67350"/>
        <property type="gene ID" value="LAX5112_01345"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="174"/>
            <end position="195"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67350.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="332" mass="35739" checksum="12FA2FBDEA189DC3" modified="2015-12-09" version="1">MSDENTNDSGSGSQIDYNTKHVYFYLPKVPTEDGEVADNIDLGAMLRLGGYCDLEQQAHKLPADELHYYPQKYIDTQEAGSENIFKKSAGSSTESSHGILMACDGHFLLKAAEKMFVETGDHHLQVNGDYEHDTTGSVNVQSGDIMNLKSGTNKALTLNAGDKTGDMELLANNKTETVQGDNNNNTSGNKTDSTKGNNTITTWGLTMTYSLDVAYSAFAAGQIVTSSWGLQLYLATLVKVYPVSEVVLAGMRFQATGLNMASVQTQVGYKALSVESRIANLRSDLTSLDGIGIKIQETNINAADNAIRLAAQQVELNNGAVQANTKGVVVFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZC3</accession>
    <name>A0A0M6ZZC3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01371</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67400.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671176.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67400">
        <property type="protein sequence ID" value="CTQ67400"/>
        <property type="gene ID" value="LAX5112_01371"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.410">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010607">
        <property type="entry name" value="DUF1194"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036465">
        <property type="entry name" value="vWFA_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06707">
        <property type="entry name" value="DUF1194"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53300">
        <property type="entry name" value="SSF53300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67400.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="265" mass="28261" checksum="E86E24E881514AF2" modified="2015-12-09" version="1">MKQCLFFETGKPVTPIMDQLHRKNASPRGQTRHRLKAVLKAGIVCGLAGVMQMAAGSAAQACSVALVLAMDSSASVDAREHQLQINGLADAFLDPDVVNAIEVVGGIYVTAFEWSGRYQQVEQLSWRFINDGATASAASNTLRQAGRGYTEFPTALGYALGHAAVLMKRAPAHCRRKVIDVAGDGINNDGFGPDSAYKAFDFNGVTVNGLVIAGPDSVPVDYYFTEVIRGPGAFVEVAGTYDDYAEAMKRKLIREIIGNGLASAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZD9</accession>
    <name>A0A0M6ZZD9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Acyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01442</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67586.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671267.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01442"/>
    <dbReference type="EnsemblBacteria" id="CTQ67586">
        <property type="protein sequence ID" value="CTQ67586"/>
        <property type="gene ID" value="LAX5112_01442"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016746">
        <property type="term" value="F:acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd07986">
        <property type="entry name" value="LPLAT_ACT14924-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045746">
        <property type="entry name" value="ACT14924-like_Acyltransf_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002123">
        <property type="entry name" value="Plipid/glycerol_acylTrfase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19576">
        <property type="entry name" value="Acyltransf_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00563">
        <property type="entry name" value="PlsC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PlsC" evidence="1">
        <location>
            <begin position="79"/>
            <end position="202"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00563"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67586.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="280" mass="32033" checksum="1D7ECDCCFD1D02F5" modified="2015-12-09" version="1">MDYAEFSYANPDHHPLKRMVIRSIERLSGRRKLLDLYEIWKQSIVTTDYMWSELLRLINIRVSVDSGEWPPKDVPNGPLVLIANHPYGIGDGLAILSLAEQLGRPFKIMINNELLKLPEIRPFSLPVDFEETKEALKTNMATRKEALKLLEEGTTIIVFPGGGVATAQKPFGRAEELPWKTFTAKMIRSSKATVLPIHFEGQNSWLFHLVSRFSLTLRLSLYVREFRRTLGQAIRARAGAPIPYETISGFKDQKEVMDFLQSKVMEMAPAEQKERLLSRH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0I1</accession>
    <name>A0A0M7A0I1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">PAS_4 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01595</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67986.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67986">
        <property type="protein sequence ID" value="CTQ67986"/>
        <property type="gene ID" value="LAX5112_01595"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035965">
        <property type="entry name" value="PAS-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013656">
        <property type="entry name" value="PAS_4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08448">
        <property type="entry name" value="PAS_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55785">
        <property type="entry name" value="SSF55785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PAS_4" evidence="1">
        <location>
            <begin position="10"/>
            <end position="92"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67986.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="110" mass="11987" checksum="B8BA88CB57D773E7" modified="2015-12-09" version="1">MNAADLKIMNSMPVIFWAKNEDGVYIFGNDTINEFGGGVVGKTDHELPWADTADGLVAHDKKVLAAGKPGYMHEFVHKSSKGEATLNVCKWPGELDGVRCTFGISFIIED</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1F4</accession>
    <name>A0A0M7A1F4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Arylsulfatase</fullName>
            <ecNumber evidence="3">3.1.6.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01433</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="PTM">
        <text evidence="1">The conversion to 3-oxoalanine (also known as C-formylglycine, FGly), of a serine or cysteine residue in prokaryotes and of a cysteine residue in eukaryotes, is critical for catalytic activity.</text>
    </comment>
    <dbReference type="EC" id="3.1.6.1" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67563.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671262.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01433"/>
    <dbReference type="EnsemblBacteria" id="CTQ67563">
        <property type="protein sequence ID" value="CTQ67563"/>
        <property type="gene ID" value="LAX5112_01433"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004065">
        <property type="term" value="F:arylsulfatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017850">
        <property type="entry name" value="Alkaline_phosphatase_core_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000917">
        <property type="entry name" value="Sulfatase_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00884">
        <property type="entry name" value="Sulfatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53649">
        <property type="entry name" value="SSF53649"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Sulfatase" evidence="2">
        <location>
            <begin position="5"/>
            <end position="372"/>
        </location>
    </feature>
    <feature type="modified residue" description="3-oxoalanine (Cys)" evidence="1">
        <location>
            <position position="53"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRSR" id="PIRSR600917-51"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ67563.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="500" mass="55968" checksum="C23383EF4D6CC2F3" modified="2015-12-09" version="1">MTSRPNILLITADQWRGDCLGTVGHPVVKTPNLDAFAETATVFEQHYATTAPCSPARASLYTGLYQMNHRVIWNGAPLDDRFDNIARAGRRAGYVPTLFGYTDTSPDPRVHDPNDPALSTYEGVLPGFSVRQPLPEDDKPWRSWLAARGHDPASFDTLHQVEPEDGELISRKAPRYSKDETQTAFLTDSFFNWLGEQDPGKPWMAHISFLRPHPPITVPEPYNTMYDPEHGPEFKGAESAWQEAAFHPLVSALQEYQHLSSHIPGANGHARDLTRQDLKRLRALYYGMITEVDAQLGRIFTALDQIADDTVIIFTSDHAEMMGDHWMLGKGGFYKESYHIPLIIRGPGVAKAGRVSAFTSAADIFPTLLDVLSLEPKHKPDGSSLAPYLRGQTPTGWRDAALYEFDFRRLLQFFPEELRRSCQAGGASALTRLGTDWQYVHFSGLPNLLLAANDEKGGIENKAESEPAALIQNMNALLSSRMRHNDETLARTMVWEYYSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1G8</accession>
    <name>A0A0M7A1G8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01639</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68110.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ68110">
        <property type="protein sequence ID" value="CTQ68110"/>
        <property type="gene ID" value="LAX5112_01639"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ68110.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="179" mass="19872" checksum="409DB506B3E50E2E" modified="2015-12-09" version="1">MVFMTDFHLQTFPPGGQILPKRKLVESNSEQGRFLYVFQRFVSALLYAACLLILTPAAHAQPVQEPARGTAERSAILNAVRPLAEAHFGAPVEFVVSWLRAGGGWAFAGVAPQRPGGAPIDLRNTVYASEADYMDGLQTYVLLRYQYDRWNVVDFAVGPTDVFWHGHPLYRQVPLGLTP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1H7</accession>
    <name>A0A0M7A1H7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Pseudouridine kinase</fullName>
            <ecNumber evidence="2">2.7.1.83</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">psuK</name>
        <name evidence="2" type="ORF">LAX5112_01643</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.7.1.83" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68120.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671410.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01643"/>
    <dbReference type="EnsemblBacteria" id="CTQ68120">
        <property type="protein sequence ID" value="CTQ68120"/>
        <property type="gene ID" value="LAX5112_01643"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050225">
        <property type="term" value="F:pseudouridine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1190.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011611">
        <property type="entry name" value="PfkB_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029056">
        <property type="entry name" value="Ribokinase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00294">
        <property type="entry name" value="PfkB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53613">
        <property type="entry name" value="SSF53613"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PfkB" evidence="1">
        <location>
            <begin position="13"/>
            <end position="299"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68120.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="313" mass="32684" checksum="DCCC485C961FBFFF" modified="2015-12-09" version="1">MMTNVFPFSPLPVLCTGAIHYDTLAHASEAYRPETSTPAKLTAKPGGVATNIARTLVRLDIPTGLAGAIGADGAGASLSEQLTADGIELYTLERTGFSTGQYIAFHNPDGSLAAASVDDRVLSEAPPDLFDPVFDALPASLKTGLWFIDANLPDQLLKSVSDRAPEGRLVANAVSNSKATRLLPLLPKLHCLMLNRGEALAMTGKSTETSSEDLLRDLQYLGAKRVVLTNGKSDVLVLNEEAIAAHKTLATQIVDVTGAGDALTAGTIAGLCRGYHLNDAVPLGLRAAAITLKSTGALTEGLSWDALATLNEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2H9</accession>
    <name>A0A0M7A2H9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Phosphoglycolate phosphatase</fullName>
            <ecNumber evidence="1">3.1.3.18</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">gph_3</name>
        <name evidence="1" type="ORF">LAX5112_01762</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.3.18" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68500.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671491.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01762"/>
    <dbReference type="EnsemblBacteria" id="CTQ68500">
        <property type="protein sequence ID" value="CTQ68500"/>
        <property type="gene ID" value="LAX5112_01762"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008967">
        <property type="term" value="F:phosphoglycolate phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.240">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006439">
        <property type="entry name" value="HAD-SF_hydro_IA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041492">
        <property type="entry name" value="HAD_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023198">
        <property type="entry name" value="PGP-like_dom2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13419">
        <property type="entry name" value="HAD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01549">
        <property type="entry name" value="HAD-SF-IA-v1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ68500.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="226" mass="24780" checksum="FF2238C20CE3037A" modified="2015-12-09" version="1">MYLIIFDVDGTLLDSQNTIVHGFETAFSAVGLPAPDRKTILSIVGRSLEEAFQDLVGPEHTHLVAQMADAYRTEKIARRTSGLDLDPLYPGAREVIGRLHARPDVLLGIATGKAMRGVRYMLDVHDLHGRFITIQTADTSPSKPHPDMIERALRETGAEALKTVMIGDTGFDMSMARSAGVHAIGVTWGYHDHSQLVTEGAERIVHTFDELVLAINEVLEITEEAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2N1</accession>
    <name>A0A0M7A2N1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">3-oxoacyl-[acyl-carrier-protein] reductase FabG</fullName>
            <ecNumber evidence="1">1.1.1.100</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">fabG_5</name>
        <name evidence="1" type="ORF">LAX5112_01839</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.1.1.100" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68676.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671552.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01839"/>
    <dbReference type="EnsemblBacteria" id="CTQ68676">
        <property type="protein sequence ID" value="CTQ68676"/>
        <property type="gene ID" value="LAX5112_01839"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004316">
        <property type="term" value="F:3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ68676.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="234" mass="24762" checksum="3581C224DD905F2C" modified="2015-12-09" version="1">MSKQKIALITAGGSGMGADAARRLAADGFKVAILSSSGKGEALAADLGGIGHTGSNLNNDDLKAFVDKAMTAFGRIDVLVNSAGHGPKGDIMEIPDEDWHLGMDYYLMNVIRPSRLVAPIMAGQAGGTVINISTFAVFEPDPMFPTSGVFRAGLAAFTKLFSDKYAAENVRMNNVLPGFIDSLPEKEDRRSRIPMGRYGRSEEVSGLISYLASDAAAYVTGQNIRIDGGLTRSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2T2</accession>
    <name>A0A0M7A2T2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Methylisocitrate lyase</fullName>
            <ecNumber evidence="1">4.1.3.30</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">prpB</name>
        <name evidence="1" type="ORF">LAX5112_02012</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="4.1.3.30" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69179.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671707.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02012"/>
    <dbReference type="EnsemblBacteria" id="CTQ69179">
        <property type="protein sequence ID" value="CTQ69179"/>
        <property type="gene ID" value="LAX5112_02012"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046421">
        <property type="term" value="F:methylisocitrate lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd00377">
        <property type="entry name" value="ICL_PEPM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039556">
        <property type="entry name" value="ICL/PEPM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015813">
        <property type="entry name" value="Pyrv/PenolPyrv_Kinase-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040442">
        <property type="entry name" value="Pyrv_Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51621">
        <property type="entry name" value="SSF51621"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0456">Lyase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ69179.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="280" mass="29865" checksum="2C1098238C0700BD" modified="2015-12-09" version="1">MVTAAQRRSAFNALHVKGKAFLMPNPFDIGSARILDGMRFDALATSSAGFAWARGVRDAEGLIGRDDALAHAADIISVTSLPVNGDLENGFGDSPEDVVETIKGAIEVGLAGCSIEDYSQDPKIPFYPLDLAVERIKAASAYVKENAPEFVLTARSEGPVKSEHELDQTIKRLNAFKDAGADCVYAPMLKDKAQITKILGAVDAPLNILAGRPNFHLTRKELGDLGVARISIGSGLARLAYGAFTAAAEDMKDGGSFGCFDRDPSAEMPVNFEDFMKAKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A315</accession>
    <name>A0A0M7A315_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01967</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ69007.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671648.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ69007">
        <property type="protein sequence ID" value="CTQ69007"/>
        <property type="gene ID" value="LAX5112_01967"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036271">
        <property type="entry name" value="Tet_transcr_reg_TetR-rel_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00440">
        <property type="entry name" value="TetR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00455">
        <property type="entry name" value="HTHTETR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48498">
        <property type="entry name" value="SSF48498"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50977">
        <property type="entry name" value="HTH_TETR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH tetR-type" evidence="2">
        <location>
            <begin position="3"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="1">
        <location>
            <begin position="26"/>
            <end position="45"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ69007.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="188" mass="21079" checksum="2EB36BC86F5A6214" modified="2015-12-09" version="1">MRPSKRDELVHKAQEIFDRDGFQATGMDALVAETGISKTTMFKHFRNKDELILATLRLRDETFRNWMHRKLDRFSGVPDQQLLAVFDLLQEWFDQPDFHGCLFIKAASEFSNGEAAIPAQAREHKRLLLNDLIGLAKAAGADFPDQLGRQLMLLIEGAIVAARMGYSQTPARDAHSAAAVLIAKSISK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A350</accession>
    <name>A0A0M7A350_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative transposase OrfB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02132</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69488.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ69488">
        <property type="protein sequence ID" value="CTQ69488"/>
        <property type="gene ID" value="LAX5112_02132"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025948">
        <property type="entry name" value="HTH-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001584">
        <property type="entry name" value="Integrase_cat-core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13276">
        <property type="entry name" value="HTH_21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13683">
        <property type="entry name" value="rve_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50994">
        <property type="entry name" value="INTEGRASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Integrase catalytic" evidence="1">
        <location>
            <begin position="99"/>
            <end position="264"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50994"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69488.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="274" mass="31999" checksum="EB02216564EC7CC4" modified="2015-12-09" version="1">MSWAIKTNGYSQRRACGLVDIDPGVYRYRSTRPDDADLRQKLRELAFERRRFGYRRLHILLKREGIEANWKKVYRIYREERLTVRKRGGRKQALGTRAPMAVPQAANQRWSPDFVSDALIDGRRFRILYVIDGFSRECLATVVDNSISGARVARELDGIAERRGRYPLMVVSDNGTELTSNAMLKWQQDRGVEWHYIAPGKPMQNGFVESFNGRLRDECLNEHLFRSYRHARDIIEDWRIDYNLNRPHTSLDGLIPNEFATQSITDHTVNRANL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3A8</accession>
    <name>A0A0M7A3A8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Maleylacetate reductase</fullName>
            <ecNumber evidence="4">1.3.1.32</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">tfdF</name>
        <name evidence="4" type="ORF">LAX5112_02159</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the iron-containing alcohol dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.3.1.32" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69555.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671812.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02159"/>
    <dbReference type="EnsemblBacteria" id="CTQ69555">
        <property type="protein sequence ID" value="CTQ69555"/>
        <property type="gene ID" value="LAX5112_02159"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018506">
        <property type="term" value="F:maleylacetate reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd08177">
        <property type="entry name" value="MAR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001670">
        <property type="entry name" value="ADH_Fe/GldA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039697">
        <property type="entry name" value="Alcohol_dehydrogenase_Fe"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034786">
        <property type="entry name" value="MAR"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11496">
        <property type="entry name" value="PTHR11496"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00465">
        <property type="entry name" value="Fe-ADH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 4" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Fe-ADH" evidence="3">
        <location>
            <begin position="13"/>
            <end position="335"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007358"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00465"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ69555.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="353" mass="36951" checksum="13485F71F8DF39CC" modified="2015-12-09" version="1">MTRTFTYRGSAAHIVFGAGKRSEIGDWVEKLGCSNALVLSTPHQEGDAARLSDQLGSLSAGVFAKATMHTPVDVTDEAMEAVKSAGADCVVSLGGGSTTGLGKAIAYRTDLPQVVIPTTYAGSEVTPILGQTEGGRKTTVRGDSILPEVVIYDPELTLGLPLSMSLTSGLNAMAHAAEALYAQDRNPVSSLMAAEGLAAFKRSLPALVADRSDADARADALYGAWLCGTVLGTVGMALHHKICHTLGGSFDTPHAETHAIMLPHTVGFNASAMPAELQPIADLFGATPGAGLFDFSKEISAPQALKDLGLTEADLDRASEIATEAPYWNPRPIDRVSIRQLLQDAWEGSRPAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3K8</accession>
    <name>A0A0M7A3K8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Pyridoxamine 5'-phosphate oxidase, FMN-binding family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_01966</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ69006.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671647.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01966"/>
    <dbReference type="EnsemblBacteria" id="CTQ69006">
        <property type="protein sequence ID" value="CTQ69006"/>
        <property type="gene ID" value="LAX5112_01966"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011576">
        <property type="entry name" value="Pyridox_Oxase_put"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012349">
        <property type="entry name" value="Split_barrel_FMN-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01243">
        <property type="entry name" value="Putative_PNPOx"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Putative_PNPOx" evidence="3">
        <location>
            <begin position="43"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="20"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="177"/>
            <end position="204"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01243"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ69006.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="209" mass="23681" checksum="453B4B4DAC983E70" modified="2015-12-09" version="1">MARALSTIAFTPAVRARQTEEGSREAYAPLDLPEADSGDRLGPAEAAFISERDGFYQATVSETGWPYVQFRGGPRGFLKVLDEKTLAYADFRGNRQYISSGNLTENDRVSLILMDYPNRRRLKVWARARQIDAKDDPNLIATLRQDGYRDLPERAVILTIEALDWNCPQHIPKRYTLEELAPDILALQNRIAELEAENAELKDFLKPTP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A420</accession>
    <name>A0A0M7A420_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Cytochrome c552</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">cycB</name>
        <name evidence="7" type="ORF">LAX5112_02036</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69232.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02036"/>
    <dbReference type="EnsemblBacteria" id="CTQ69232">
        <property type="protein sequence ID" value="CTQ69232"/>
        <property type="gene ID" value="LAX5112_02036"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.760.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009056">
        <property type="entry name" value="Cyt_c-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036909">
        <property type="entry name" value="Cyt_c-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13442">
        <property type="entry name" value="Cytochrome_CBB3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46626">
        <property type="entry name" value="SSF46626"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51007">
        <property type="entry name" value="CYTC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 4" id="KW-0349">Heme</keyword>
    <keyword evidence="3 4" id="KW-0408">Iron</keyword>
    <keyword evidence="2 4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="5">
        <location>
            <begin position="1"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809226" evidence="5">
        <location>
            <begin position="33"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="domain" description="Cytochrome c" evidence="6">
        <location>
            <begin position="33"/>
            <end position="113"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00433"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ69232.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="115" mass="12263" checksum="454E5D9855DA329F" modified="2015-12-09" version="1">MVERSKMRRSGFQALVLGFSLAAVAPLSSAFAADVAAGKDLALQWCASCHLVSNDQATASSVSLPSFYDMAKDQSWDAQKLATFLANPHPQMPNMTLGNIEIANLAGYIQSLANE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4A1</accession>
    <name>A0A0M7A4A1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 5 7">50S ribosomal protein L15</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 10" type="primary">rplO</name>
        <name evidence="10" type="ORF">LAX5112_01745</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Binds to the 23S rRNA.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Part of the 50S ribosomal subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 5 6">Belongs to the universal ribosomal protein uL15 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68454.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008192103.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01745"/>
    <dbReference type="EnsemblBacteria" id="CTQ68454">
        <property type="protein sequence ID" value="CTQ68454"/>
        <property type="gene ID" value="LAX5112_01745"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015934">
        <property type="term" value="C:large ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01341">
        <property type="entry name" value="Ribosomal_L15"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036227">
        <property type="entry name" value="L18e/L15P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030878">
        <property type="entry name" value="Ribosomal_L15"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005749">
        <property type="entry name" value="Ribosomal_L15_bac-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001196">
        <property type="entry name" value="Ribosomal_L15_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021131">
        <property type="entry name" value="Ribosomal_L18e/L15P"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12934">
        <property type="entry name" value="PTHR12934"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00828">
        <property type="entry name" value="Ribosomal_L27A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52080">
        <property type="entry name" value="SSF52080"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01071">
        <property type="entry name" value="rplO_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00475">
        <property type="entry name" value="RIBOSOMAL_L15"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 5 6" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 5 6" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="5" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="5" id="KW-0699">rRNA-binding</keyword>
    <feature type="domain" description="Ribosomal_L18e/L15P" evidence="9">
        <location>
            <begin position="27"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="1"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="1"/>
            <end position="15"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007320"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00029547"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01341"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003888"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003889"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF00828"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ68454.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="155" mass="15856" checksum="5B8BB4F8C5A9AC5E" modified="2015-12-09" version="1">MKLNELRDNDGASSERTRVGRGIGSGKGKTGGRGVKGQKSRSGVAIKGFEGGQMPLHRRLPKRGFTNIFAKDFNTVSIGRVQQAIDAGKLNASEAVTVEALKAAGVVKRVRDGVRLVASGELTAAVTFEVAGASKGAVAAIEKAGGKVAVLGAQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4F7</accession>
    <name>A0A0M7A4F7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Mitochondrial import inner membrane, translocase subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_02002</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the Tim44 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69150.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008188612.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02002"/>
    <dbReference type="EnsemblBacteria" id="CTQ69150">
        <property type="protein sequence ID" value="CTQ69150"/>
        <property type="gene ID" value="LAX5112_02002"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006886">
        <property type="term" value="P:intracellular protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032710">
        <property type="entry name" value="NTF2-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039544">
        <property type="entry name" value="Tim44-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007379">
        <property type="entry name" value="Tim44-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016985">
        <property type="entry name" value="UCP031890_Tim44-rel"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10721">
        <property type="entry name" value="PTHR10721"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04280">
        <property type="entry name" value="Tim44"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF031890">
        <property type="entry name" value="UCP031890_transporter_Tim44"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00978">
        <property type="entry name" value="Tim44"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54427">
        <property type="entry name" value="SSF54427"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="2" id="KW-0999">Mitochondrion inner membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tim44" evidence="6">
        <location>
            <begin position="97"/>
            <end position="243"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="31"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="43"/>
            <end position="63"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009597"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022792"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM00978"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ69150.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="245" mass="26883" checksum="22AF29F2784DECF7" modified="2015-12-09" version="1">MNEIFDPLNLLLLGLAVFILFRLRSVLGKRTGEERPPFDPYSKPEQQNGQANGQDNVIPLPHQGQQSPEGYDDMAPARQEEDGEVVIDKVAPAGSALNNALKQILSVDRSFEPEPFIQGAKAAYEMIVMAFADGDKKALKNLLSRDVFEGFSAAIDDREKRGETIESTFVGIDKAEIVEAALKDTTAQVTVRIHSQLISATRDKGGEVVDGDPAKVTEVIDIWTFARDTATRDPNWKLVATESAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4N5</accession>
    <name>A0A0M7A4N5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 5">50S ribosomal protein L28</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 6" type="primary">rpmB</name>
        <name evidence="6" type="ORF">LAX5112_02274</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the bacterial ribosomal protein bL28 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69839.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671930.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02274"/>
    <dbReference type="EnsemblBacteria" id="CTQ69839">
        <property type="protein sequence ID" value="CTQ69839"/>
        <property type="gene ID" value="LAX5112_02274"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.170.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00373">
        <property type="entry name" value="Ribosomal_L28"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034704">
        <property type="entry name" value="L28p-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026569">
        <property type="entry name" value="Ribo_L28/L24"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037147">
        <property type="entry name" value="Ribo_L28/L24_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001383">
        <property type="entry name" value="Ribosomal_L28"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13528">
        <property type="entry name" value="PTHR13528"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00830">
        <property type="entry name" value="Ribosomal_L28"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF143800">
        <property type="entry name" value="SSF143800"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00009">
        <property type="entry name" value="L28"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3 5" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008760"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00021198"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00373"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ69839.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="98" mass="10816" checksum="4A8FCA29C5778101" modified="2015-12-09" version="1">MARRCELSGKDVMTGNNVSHANNKSRRRFLPNLCNVSLMSDTLGETFKLKVSAHALRSVEHRGGLDAYLMKASDAELSDNARKIKVSIKRKQEEAAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4X8</accession>
    <name>A0A0M7A4X8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Gcv operon activator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">gcvA_6</name>
        <name evidence="3" type="ORF">LAX5112_01838</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68674.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671551.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01838"/>
    <dbReference type="EnsemblBacteria" id="CTQ68674">
        <property type="protein sequence ID" value="CTQ68674"/>
        <property type="gene ID" value="LAX5112_01838"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00039">
        <property type="entry name" value="HTHLYSR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="4"/>
            <end position="61"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ68674.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="294" mass="32570" checksum="D24D768954085C27" modified="2015-12-09" version="1">MRHPSLNKLRAFDAAARHLNFRLAAEELNLTQGAVAQQVRALEDELGVQLFDRLPRGLALTGPAEGFHAQVRRGLDEIDRAIINISQQIPRITLSLPPSFAAQWLVPRLPGFLDKNPGLDLATLATERLATFKGDGVDLAIRIGTPPFPGLKSHFLAAIRLVAVASPVLTGNWKTIENIQDMPHLRILLDSHTSWKEVLGTELLPEDVTYLSFSHSSLAINAALEGQGIALVPELLVQRQLTNGALTCLWLQPDQGIGTRGYHLVYPENPVRFGEARQKVIDWICREFEKDWPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A536</accession>
    <name>A0A0M7A536_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_02423</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70235.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672031.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02423"/>
    <dbReference type="EnsemblBacteria" id="CTQ70235">
        <property type="protein sequence ID" value="CTQ70235"/>
        <property type="gene ID" value="LAX5112_02423"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016811">
        <property type="term" value="F:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006672">
        <property type="term" value="P:ceramide metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008901">
        <property type="entry name" value="ACER"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05875">
        <property type="entry name" value="Ceramidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="23"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="49"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="76"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="103"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="129"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="157"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="191"/>
            <end position="209"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ70235.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="214" mass="23739" checksum="23B3FFA10DD10C5C" modified="2015-12-09" version="1">MDLTDQLNNYCERLGPEFWSEPVNAITNAAFVVAALAAYLLWRRKTPDDWVALFLICVVLATGIGSFLFHTFATRWALLADVIPIVVFIHGFLLFALRRFLNLHWVISVSIVIGFFVLSPMVGEVWAPLIGSSAGYLPALLAIFVVGGFFYQHDKALAKQVLLIGILFTVSLTFRTLDGPVCSQLALGTHFLWHILNAAVLFGLLRVLILHRAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A690</accession>
    <name>A0A0M7A690_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Threonine synthase</fullName>
            <ecNumber evidence="5">4.2.3.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">thrC</name>
        <name evidence="12" type="ORF">LAX5112_02368</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>H2O + O-phospho-L-homoserine = L-threonine + phosphate</text>
            <dbReference type="Rhea" id="RHEA:10840"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57590"/>
            <dbReference type="ChEBI" id="CHEBI:57926"/>
            <dbReference type="EC" id="4.2.3.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 9">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="3">Amino-acid biosynthesis; L-threonine biosynthesis; L-threonine from L-aspartate: step 5/5.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the threonine synthase family.</text>
    </comment>
    <dbReference type="EC" id="4.2.3.1" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70121.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671987.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02368"/>
    <dbReference type="EnsemblBacteria" id="CTQ70121">
        <property type="protein sequence ID" value="CTQ70121"/>
        <property type="gene ID" value="LAX5112_02368"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00050">
        <property type="reaction ID" value="UER00065"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004795">
        <property type="term" value="F:threonine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009088">
        <property type="term" value="P:threonine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1100">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1380.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001926">
        <property type="entry name" value="PLP-dep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000634">
        <property type="entry name" value="Ser/Thr_deHydtase_PyrdxlP-BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029144">
        <property type="entry name" value="Thr_synth_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037158">
        <property type="entry name" value="Thr_synth_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004450">
        <property type="entry name" value="Thr_synthase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036052">
        <property type="entry name" value="Trypto_synt_PLP_dependent"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00291">
        <property type="entry name" value="PALP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14821">
        <property type="entry name" value="Thr_synth_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53686">
        <property type="entry name" value="SSF53686"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00260">
        <property type="entry name" value="thrC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00165">
        <property type="entry name" value="DEHYDRATASE_SER_THR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="12" id="KW-0456">Lyase</keyword>
    <keyword evidence="8 9" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0791">Threonine biosynthesis</keyword>
    <feature type="domain" description="Thr_synth_N" evidence="11">
        <location>
            <begin position="2"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="domain" description="PALP" evidence="10">
        <location>
            <begin position="94"/>
            <end position="406"/>
        </location>
    </feature>
    <feature type="modified residue" description="N6-(pyridoxal phosphate)lysine" evidence="9">
        <location>
            <position position="112"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000051"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004979"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00005517"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00013028"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00018679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022697"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR604450-51"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF00291"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF14821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ70121.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="468" mass="50790" checksum="C6D2C7703786339A" modified="2015-12-09" version="1">MKYSSTRGDAPVLEFSDVLLQGLARDGGLYLPETWPQFDAETIASFAGKSYEEVAFEVISPFVDGAIPDADLKSMIAESYSGFRHPAVTPLVQTGSNTFILELFHGPTLAFKDVAMQLLGRMMDYVLTQRGLRATIVGATSGDTGGAAIEAFRGRGRTDIFVLFPDGRVSNVQRRQMTTPTEANVHALALTGNFDDCQAIVKGMFNHFNFRDRVALSGVNSINWARILAQIVYYFVAGAALGAPHRKVSFTVPTGNFGDIFAGYAAMKMGLPIDKLVVATNVNDILARTLETGRYEKRGVHPTISPSMDIQVSSNFERLLSEVNGRDGDVVRRMMNQLNQSGSFTIEDGPLAEMRQHFAAGRCDEEATSATIAELWKEAGYLLDPHTAIGVHVAKAYTSGETPMVVLGTAHPAKFPDAVEAASGVRPDLPENLKDMMFAEERQQVLAAEQGAVEQYIEKHARAVGAGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6B5</accession>
    <name>A0A0M7A6B5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Arginine--pyruvate transaminase AruH</fullName>
            <ecNumber evidence="2">2.6.1.84</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">aruH</name>
        <name evidence="2" type="ORF">LAX5112_02554</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.6.1.84" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70628.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672154.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02554"/>
    <dbReference type="EnsemblBacteria" id="CTQ70628">
        <property type="protein sequence ID" value="CTQ70628"/>
        <property type="gene ID" value="LAX5112_02554"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008483">
        <property type="term" value="F:transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009058">
        <property type="term" value="P:biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004839">
        <property type="entry name" value="Aminotransferase_I/II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00155">
        <property type="entry name" value="Aminotran_1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="2" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Aminotran_1_2" evidence="1">
        <location>
            <begin position="33"/>
            <end position="381"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70628.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="398" mass="43234" checksum="9E911A97D2B0FD0C" modified="2015-12-09" version="1">MRYASITDRLTHLGSGKWTVHLKAREMVDAGTPVIELTIGEPDIMPDKALLDEAERSMRAGRIRYSNGRGEPKIIAALTEKYRQRRPSISERNILCFPGTQTALFAVMLGLVEGGDAVLVPDPYYATYEGVIAATGAAMVPVPLRPENGFHLKPEDLEAAVTPNARVLLLNTPHNPTGAALTADEIAAIGEVCQRHDLWIVCDEVYEKLIFDRTFASPFDIEALQERTIAVSSISKSHAAPGFRSGWAVGPEEFCDRLLAVSETMLFGGQPFIADMTAMAVSGEFDTAERMRESYKRRAEILMEHLGGHGALRPMMPEAGMFLLVDVSGTGLDGETFATRLLDEKHVAVMPGASFGEQAAGFIRLSLTVADDTLREAAGRIATFADELAANVGSKKWA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6F0</accession>
    <name>A0A0M7A6F0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">tRNA-specific adenosine deaminase</fullName>
            <ecNumber evidence="3">3.5.4.33</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3 5" type="primary">tadA</name>
        <name evidence="5" type="ORF">LAX5112_02332</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>adenosine(34) in tRNA + H(+) + H2O = inosine(34) in tRNA + NH4(+)</text>
            <dbReference type="Rhea" id="RHEA:43168"/>
            <dbReference type="Rhea" id="RHEA-COMP:10373"/>
            <dbReference type="Rhea" id="RHEA-COMP:10374"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="ChEBI" id="CHEBI:74411"/>
            <dbReference type="ChEBI" id="CHEBI:82852"/>
            <dbReference type="EC" id="3.5.4.33"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="3">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="3">Binds 1 zinc ion per subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the cytidine and deoxycytidylate deaminase family.</text>
    </comment>
    <dbReference type="EC" id="3.5.4.33" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70042.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02332"/>
    <dbReference type="EnsemblBacteria" id="CTQ70042">
        <property type="protein sequence ID" value="CTQ70042"/>
        <property type="gene ID" value="LAX5112_02332"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052717">
        <property type="term" value="F:tRNA-specific adenosine-34 deaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0002100">
        <property type="term" value="P:tRNA wobble adenosine to inosine editing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00972">
        <property type="entry name" value="tRNA_aden_deaminase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016192">
        <property type="entry name" value="APOBEC/CMP_deaminase_Zn-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002125">
        <property type="entry name" value="CMP_dCMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016193">
        <property type="entry name" value="Cytidine_deaminase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028883">
        <property type="entry name" value="tRNA_aden_deaminase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14437">
        <property type="entry name" value="MafB19-deam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53927">
        <property type="entry name" value="SSF53927"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00903">
        <property type="entry name" value="CYT_DCMP_DEAMINASES_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51747">
        <property type="entry name" value="CYT_DCMP_DEAMINASES_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1 3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0819">tRNA processing</keyword>
    <keyword evidence="2 3" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="CMP/dCMP-type deaminase" evidence="4">
        <location>
            <begin position="8"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="3">
        <location>
            <position position="61"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="59"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <note>catalytic</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="89"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <note>catalytic</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="92"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <note>catalytic</note>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00972"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51747"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ70042.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="155" mass="16668" checksum="6327B570E36A8C7F" modified="2015-12-09" version="1">MTSQDSNSAEKTFMDLALEEAAAAAERGEVPVGAVLVRNGEIVARDGNRTLELNDPTAHAEVLVIRAACAALQSQRLPECDLYVTLEPCAMCAGAISFARIRRLYYGAGDEKGGAVDHGTRFFCQPICHHAPDVYAGIGERQSAALLKAFFQGRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A700</accession>
    <name>A0A0M7A700_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Trehalose transport system permease protein SugB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">sugB_1</name>
        <name evidence="7" type="ORF">LAX5112_02565</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70659.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040450872.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02565"/>
    <dbReference type="EnsemblBacteria" id="CTQ70659">
        <property type="protein sequence ID" value="CTQ70659"/>
        <property type="gene ID" value="LAX5112_02565"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="7"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="66"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="99"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="130"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="174"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="231"/>
            <end position="252"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="62"/>
            <end position="252"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ70659.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="265" mass="29760" checksum="84624A34881285D9" modified="2015-12-09" version="1">MRMRNLVPILYILFLMLPIYWLVAMSFKTTNEILSGFSLFPQTWTFENYIEIFTDPTWYWGYINSIIYVTLNTVISVCVALPAAYAFSRYSFVGDKHLFFWLLTNRMAPAAVFALPFFQLYSAVGLFDTYLAVALAHCLFNVPLAVWILEGFMSGVPKELDETAYVDGYSFPRFFMTIFLPAIKSGVGVAAFFCFMFSWVEMLLSKTLTAVEAKPIAAVMTRTASSAGYELGLLAAAGTLTIIPGAIVIYFVRNYIAKGFALGRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7C5</accession>
    <name>A0A0M7A7C5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Phosphate transport system permease protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">pstC</name>
        <name evidence="12" type="ORF">LAX5112_02537</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 10">Cell inner membrane</location>
            <topology evidence="2 10">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="9">Cell membrane</location>
            <topology evidence="9">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 10">Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70517.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672110.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02537"/>
    <dbReference type="EnsemblBacteria" id="CTQ70517">
        <property type="protein sequence ID" value="CTQ70517"/>
        <property type="gene ID" value="LAX5112_02537"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005315">
        <property type="term" value="F:inorganic phosphate transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006817">
        <property type="term" value="P:phosphate ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011864">
        <property type="entry name" value="Phosphate_PstC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022182">
        <property type="entry name" value="PstC_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12501">
        <property type="entry name" value="DUF3708"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02138">
        <property type="entry name" value="phosphate_pstC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="5" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-0592">Phosphate transport</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4 9" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="51"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="162"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="200"/>
            <end position="220"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="227"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="264"/>
            <end position="285"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="306"/>
            <end position="329"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="335"/>
            <end position="357"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="390"/>
            <end position="411"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="456"/>
            <end position="482"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="11">
        <location>
            <begin position="260"/>
            <end position="478"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007069"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU363054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ70517.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="490" mass="51463" checksum="4A440F93E9325529" modified="2015-12-09" version="1">MPVIWLILIVLAIAVVGYVLGRGRALASAGGEQIKLHSLPSYYGSNVAMKVVVPAFLILVLWLLAQPLIVNNSISGLIPDSEIAEGSSRGLVLAEVRRAARGLDNAVASGLITEDFARNARADFNDVTARLKEAGQVVTSQITQPILRAAQEYRIQNATGNLMMTIAVILAAMAGAAWGLAESKADFRARNTVEQGVKALLIAAASIAILTTIGIVFSLVFNTIEFFRLYPAFDFFFGLTWSPTFSGRGGNSELGIIPLLWGTFYISFVALAVAVPIGLFAAVYLSEYAGPNVRAVAKPLLEILAGIPTIVYGLFALLTVGPLLVSIFGPDGVGIMQAGTAVMTAGLVMGIMLIPFVSSLSDDIINAVPQAMRDGSYGLGATKSETVKQVILPAALPGIVGAILLAASRAIGETMIVVLGAGAAARLSLNPFDAMTTVTAKIVSQLTGDADFASPVALVAFALGMTLFVVTLGLNIVALYIVRKYREQYD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7D5</accession>
    <name>A0A0M7A7D5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Phosphate-specific transport system accessory protein PhoU</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">phoU</name>
        <name evidence="5" type="ORF">LAX5112_02540</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Plays a role in the regulation of phosphate uptake.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the PhoU family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70527.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672111.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02540"/>
    <dbReference type="EnsemblBacteria" id="CTQ70527">
        <property type="protein sequence ID" value="CTQ70527"/>
        <property type="gene ID" value="LAX5112_02540"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030643">
        <property type="term" value="P:cellular phosphate ion homeostasis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045936">
        <property type="term" value="P:negative regulation of phosphate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006817">
        <property type="term" value="P:phosphate ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.220">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028366">
        <property type="entry name" value="P_transport_PhoU"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038078">
        <property type="entry name" value="PhoU-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026022">
        <property type="entry name" value="PhoU_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42930">
        <property type="entry name" value="PTHR42930"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01895">
        <property type="entry name" value="PhoU"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF003107">
        <property type="entry name" value="PhoU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02135">
        <property type="entry name" value="phoU_full"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2 3" id="KW-0592">Phosphate transport</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="domain" description="PhoU" evidence="4">
        <location>
            <begin position="20"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="domain" description="PhoU" evidence="4">
        <location>
            <begin position="125"/>
            <end position="208"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008107"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022592"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRNR" id="PIRNR003107"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF01895"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ70527.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="231" mass="25539" checksum="C8EE3F68194401B4" modified="2015-12-09" version="1">MSEHTVTAYDDELNVMAGRIAEMGGLAEKAFAEAVSALVSGDTELARQVIDQDRRLDALHQEVEEGLIAMIVRRQPMGQDLREITAASRIANDLERVGDLAKNVAKRAIAIDNDIQNKKLAIGVEHMTELALGQLKKVLDAYTGRNAEAARQVQDADAEVDAIYTSLFRELLTYMMEDPRVITSCVHLLFCAKNIERIGDHATNIAENVFFMVTGERLPEDRNKVDETGAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7Z8</accession>
    <name>A0A0M7A7Z8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 8">30S ribosomal protein S20</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8 10" type="primary">rpsT</name>
        <name evidence="10" type="ORF">LAX5112_02768</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 8">Binds directly to 16S ribosomal RNA.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the bacterial ribosomal protein bS20 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71285.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451298.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02768"/>
    <dbReference type="EnsemblBacteria" id="CTQ71285">
        <property type="protein sequence ID" value="CTQ71285"/>
        <property type="gene ID" value="LAX5112_02768"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00500">
        <property type="entry name" value="Ribosomal_S20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002583">
        <property type="entry name" value="Ribosomal_S20"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036510">
        <property type="entry name" value="Ribosomal_S20_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33398">
        <property type="entry name" value="PTHR33398"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01649">
        <property type="entry name" value="Ribosomal_S20p"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46992">
        <property type="entry name" value="SSF46992"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00029">
        <property type="entry name" value="S20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 8" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="6 8" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="5 8" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="4 8" id="KW-0699">rRNA-binding</keyword>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="9">
        <location>
            <begin position="10"/>
            <end position="27"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007634"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00015666"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00500"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ71285.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="88" mass="9509" checksum="F170ABCFF7B0465D" modified="2015-12-09" version="1">MANTPSAKKAARKIARRTATNKARRSRVRTYLRKVEEAIASGDQAAANDAFKAAQPEIMRAASKGTMHANTASRKVSRLNARIKALSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8A8</accession>
    <name>A0A0M7A8A8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative phospholipid ABC transporter permease protein MlaE</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">mlaE</name>
        <name evidence="3" type="ORF">LAX5112_02720</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71109.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02720"/>
    <dbReference type="EnsemblBacteria" id="CTQ71109">
        <property type="protein sequence ID" value="CTQ71109"/>
        <property type="gene ID" value="LAX5112_02720"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030802">
        <property type="entry name" value="Permease_MalE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002645">
        <property type="entry name" value="STAS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036513">
        <property type="entry name" value="STAS_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30188">
        <property type="entry name" value="PTHR30188"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02405">
        <property type="entry name" value="MlaE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13466">
        <property type="entry name" value="STAS_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52091">
        <property type="entry name" value="SSF52091"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="147"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="185"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="221"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="288"/>
            <end position="309"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="329"/>
            <end position="349"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="369"/>
            <end position="390"/>
        </location>
    </feature>
    <feature type="domain" description="STAS" evidence="2">
        <location>
            <begin position="36"/>
            <end position="109"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13466"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ71109.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="392" mass="42204" checksum="E25FB3B3B9D27D03" modified="2015-12-09" version="1">MTSGKGQLSGMAFLEKNKAPELHLDTDSEGHQSLILSGDWTVSTLADADQQISKLNVAKDKLTCIDVSEVDHLDTSGAWLIHRTRGQLEFSGRKVQLTGVTPVRESLFHEIEKHHPPRWQPDRSGFTIVGFLEATGRQMVEVYKDTLAMLHILGSLGIVLSTVLLQPKRLRSIAIAVQFDRSCIGAVPIVALMSFLIGAIISQQGGFYLRQFGADIFVVDLAGILVLREIGVILTAIMVAGRSGSAFTAELGAMRMQEEVDALHVIGLSVTEVLVLPRILALMIALPILTFVADISALFGAGLITWAYLDIPPAAFLTQLQSAITVNTFVVGIIKAPFMALIVGLIACVEGLKVEGSSESLGRHTTMAVVKAIFLVIVVDGMFAMFFAAIGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8J7</accession>
    <name>A0A0M7A8J7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">N-acetyltransferase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02832</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71465.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672363.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02832"/>
    <dbReference type="EnsemblBacteria" id="CTQ71465">
        <property type="protein sequence ID" value="CTQ71465"/>
        <property type="gene ID" value="LAX5112_02832"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13302">
        <property type="entry name" value="Acetyltransf_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="17"/>
            <end position="155"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13302"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71465.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="187" mass="21298" checksum="B5FBD04B01F94BA4" modified="2015-12-09" version="1">MFPNPVLQAPAPIVTRRLRLRAPKLEDAFEIDPIYNDFEVARWINVPHPCPTGFALERFQRFLTFPPHERCFIVSKKSDKKQRAIGLILANWTDAEKPPIIGFFLASRFHGKGFMGEALDAALKELFRLTNAEAIRASFYDGNIASDVLLKKKRFKPVGTSMDFNRATGKTEKQTDLILTRSVFEAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8T1</accession>
    <name>A0A0M7A8T1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Glycine betaine/carnitine/choline transport ATP-binding protein OpuCA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">opuCA</name>
        <name evidence="4" type="ORF">LAX5112_02558</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70640.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672157.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02558"/>
    <dbReference type="EnsemblBacteria" id="CTQ70640">
        <property type="protein sequence ID" value="CTQ70640"/>
        <property type="gene ID" value="LAX5112_02558"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008773">
        <property type="term" value="F:[protein-PII] uridylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00038">
        <property type="entry name" value="CAP_ED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.580.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000644">
        <property type="entry name" value="CBS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046342">
        <property type="entry name" value="CBS_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018490">
        <property type="entry name" value="cNMP-bd-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000595">
        <property type="entry name" value="cNMP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018821">
        <property type="entry name" value="DUF294_put_nucleoTrafse_sb-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005105">
        <property type="entry name" value="GlnD_Uridyltrans_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00571">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00027">
        <property type="entry name" value="cNMP_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03445">
        <property type="entry name" value="DUF294"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10335">
        <property type="entry name" value="DUF294_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00116">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00100">
        <property type="entry name" value="cNMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51206">
        <property type="entry name" value="SSF51206"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54631">
        <property type="entry name" value="SSF54631"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51371">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50042">
        <property type="entry name" value="CNMP_BINDING_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0129">CBS domain</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cyclic nucleotide-binding" evidence="2">
        <location>
            <begin position="17"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="domain" description="CBS" evidence="3">
        <location>
            <begin position="148"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="domain" description="CBS" evidence="3">
        <location>
            <begin position="213"/>
            <end position="269"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00703"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51371"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ70640.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="609" mass="66249" checksum="B279224A069D60C6" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9K3</accession>
    <name>A0A0M7A9K3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Major Facilitator Superfamily protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02732</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71142.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672282.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02732"/>
    <dbReference type="EnsemblBacteria" id="CTQ71142">
        <property type="protein sequence ID" value="CTQ71142"/>
        <property type="gene ID" value="LAX5112_02732"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="60"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="85"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="109"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="147"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="172"/>
            <end position="195"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="215"/>
            <end position="238"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="250"/>
            <end position="268"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="280"/>
            <end position="298"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="304"/>
            <end position="325"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="337"/>
            <end position="360"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="366"/>
            <end position="385"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71142.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="408" mass="45030" checksum="BFFE2C7F9C9A7D54" modified="2015-12-09" version="1">MTYFTQSTNPNELTGWRSPAVLLMIMAGAMQLSFAAWWNLMNNFAVQELDFTGREIGIQQSIREIPGFLSFLAVYLLLVMREQTLAYLSLLLLGVGVAITGYFPTVLGFYITTLIMSIGFHYYETMAQSLSLQWLPKATAAASMGKILAVGSFAQLIAYGLIFIAWKTFNLSFTVVFAIAGGLTIVVLAFLIMAYPHFKEGVPQHKKLILKKRYWLYYALTFMAGARRQIFTVFAGFLMVERFGYDVHEVAGLFLINGVFNMLLAPKIGKLIVRFGERKALILEYVGLIGVFVTYAFVTNATVAAALYVIDHAFFAIAIAIKTYFQKIADPADIAPTAGVAFTINHIAAVFIPVLFGLVWLVSPAAVFLAGAGMAAVSLFLSTMIPSNPDDGNEVDWWFRKPAAQPAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9V6</accession>
    <name>A0A0M7A9V6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">ATP synthase epsilon chain</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">ATP synthase F1 sector epsilon subunit</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="9">F-ATPase epsilon subunit</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9 13" type="primary">atpC</name>
        <name evidence="13" type="ORF">LAX5112_02895</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 9">Produces ATP from ADP in the presence of a proton gradient across the membrane.</text>
    </comment>
    <comment type="subunit">
        <text evidence="9 10">F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a, b and c.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cell membrane</location>
            <topology evidence="9">Peripheral membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 9 10">Belongs to the ATPase epsilon chain family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71649.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451346.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02895"/>
    <dbReference type="EnsemblBacteria" id="CTQ71649">
        <property type="protein sequence ID" value="CTQ71649"/>
        <property type="gene ID" value="LAX5112_02895"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045261">
        <property type="term" value="C:proton-transporting ATP synthase complex, catalytic core F(1)"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046933">
        <property type="term" value="F:proton-transporting ATP synthase activity, rotational mechanism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd12152">
        <property type="entry name" value="F1-ATPase_delta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.15.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00530">
        <property type="entry name" value="ATP_synth_epsil_bac"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001469">
        <property type="entry name" value="ATP_synth_F1_dsu/esu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020546">
        <property type="entry name" value="ATP_synth_F1_dsu/esu_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036771">
        <property type="entry name" value="ATPsynth_dsu/esu_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13822">
        <property type="entry name" value="PTHR13822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02823">
        <property type="entry name" value="ATP-synt_DE_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51344">
        <property type="entry name" value="SSF51344"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01216">
        <property type="entry name" value="ATP_synt_epsi"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 9 10" id="KW-0066">ATP synthesis</keyword>
    <keyword evidence="9" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7 9 10" id="KW-0139">CF(1)</keyword>
    <keyword evidence="11" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="9" id="KW-0375">Hydrogen ion transport</keyword>
    <keyword evidence="5 9 10" id="KW-0406">Ion transport</keyword>
    <keyword evidence="6 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 9 10" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ATP-synt_DE_N" evidence="12">
        <location>
            <begin position="5"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="11">
        <location>
            <begin position="92"/>
            <end position="135"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003543"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005712"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023196"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023310"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00530"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU003656"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF02823"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="CTQ71649.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="135" mass="14578" checksum="0DAAEBC30F2FC72C" modified="2015-12-09" version="1">MAELFQFELVSPERQLLSEQVAEVVVPGTEGEFGVLKNHSPFMSTIKPGILKVRTDAGSWDEYFVRGGFADIAPGGLTVLAEQAIPVSEISEDQLAQAIKNAEEDVADAKDDDTKQKAEMTLSQLKDVAEALKAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AA97</accession>
    <name>A0A0M7AA97_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Fe-S cluster assembly protein NifU</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02786</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71336.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008194306.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02786"/>
    <dbReference type="EnsemblBacteria" id="CTQ71336">
        <property type="protein sequence ID" value="CTQ71336"/>
        <property type="gene ID" value="LAX5112_02786"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016226">
        <property type="term" value="P:iron-sulfur cluster assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1370.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.130">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034904">
        <property type="entry name" value="FSCA_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014824">
        <property type="entry name" value="Nfu/NifU_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036498">
        <property type="entry name" value="Nfu/NifU_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035433">
        <property type="entry name" value="NFU1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001075">
        <property type="entry name" value="NIF_FeS_clus_asmbl_NifU_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08712">
        <property type="entry name" value="Nfu_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01106">
        <property type="entry name" value="NifU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF036773">
        <property type="entry name" value="HIRIP5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00932">
        <property type="entry name" value="Nfu_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF110836">
        <property type="entry name" value="SSF110836"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF117916">
        <property type="entry name" value="SSF117916"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nfu_N" evidence="1">
        <location>
            <begin position="3"/>
            <end position="88"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71336.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="185" mass="20221" checksum="25EB95C41E3390DD" modified="2015-12-09" version="1">MFIQTEATPNPATLKFLPGRVVLPEGTYDFRSKADAGASPLAEKLFDVPGVAAVFFGHDFVTVTKDDTDWQHMKPAILGVIMEQFMSGQPVMNAGESEDIEEGEFFEEGDQETVATIKELLETRVRPAVAQDGGDITFKGFKEGIVYLSMRGACAGCPSSTATLQHGIQNLLRHFVPEVEEVRPI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAY7</accession>
    <name>A0A0M7AAY7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">FMN-dependent NADPH-azoreductase</fullName>
            <ecNumber evidence="2">1.7.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">azr_3</name>
        <name evidence="2" type="ORF">LAX5112_02874</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.7.-.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71586.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672391.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02874"/>
    <dbReference type="EnsemblBacteria" id="CTQ71586">
        <property type="protein sequence ID" value="CTQ71586"/>
        <property type="gene ID" value="LAX5112_02874"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.360">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029039">
        <property type="entry name" value="Flavoprotein-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005025">
        <property type="entry name" value="FMN_Rdtase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03358">
        <property type="entry name" value="FMN_red"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52218">
        <property type="entry name" value="SSF52218"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FMN_red" evidence="1">
        <location>
            <begin position="1"/>
            <end position="128"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03358"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71586.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="189" mass="20316" checksum="0FDC0C08826246F6" modified="2015-12-09" version="1">MKILAFAATNSRQSINKRVVQAASDIITSDLDPNAEIEIIDLNDYEMPIYSIDRETEGGIPEEAQRFHEKIGTADALIVSYAEHNGTYTAAFKNVFDWASRINMKVFQDKPQVALSASMGPGGAASILKTAVGSAGFFGAEIRGSLSIGPFTEKFDTEAGKLTDESLEQSLREILSELVSAAKGAKHAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AB09</accession>
    <name>A0A0M7AB09_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Methyl-accepting chemotaxis protein 4</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">mcp4_13</name>
        <name evidence="3" type="ORF">LAX5112_03029</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72059.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672517.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72059">
        <property type="protein sequence ID" value="CTQ72059"/>
        <property type="gene ID" value="LAX5112_03029"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004089">
        <property type="entry name" value="MCPsignal_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013587">
        <property type="entry name" value="Nitrate/nitrite_sensing"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00015">
        <property type="entry name" value="MCPsignal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08376">
        <property type="entry name" value="NIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00283">
        <property type="entry name" value="MA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50111">
        <property type="entry name" value="CHEMOTAXIS_TRANSDUC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0807">Transducer</keyword>
    <feature type="domain" description="Methyl-accepting transducer" evidence="2">
        <location>
            <begin position="434"/>
            <end position="666"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ72059.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="773" mass="83335" checksum="43C414863E55765D" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AB75</accession>
    <name>A0A0M7AB75_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Recombination protein RecR</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7 9" type="primary">recR</name>
        <name evidence="9" type="ORF">LAX5112_02830</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.</text>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the RecR family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71460.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672427.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02830"/>
    <dbReference type="EnsemblBacteria" id="CTQ71460">
        <property type="protein sequence ID" value="CTQ71460"/>
        <property type="gene ID" value="LAX5112_02830"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01025">
        <property type="entry name" value="TOPRIM_recR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00017">
        <property type="entry name" value="RecR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000093">
        <property type="entry name" value="DNA_Rcmb_RecR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023627">
        <property type="entry name" value="Rcmb_RecR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023628">
        <property type="entry name" value="Rcmb_RecR_C4-type_Zn"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015967">
        <property type="entry name" value="Rcmb_RecR_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006171">
        <property type="entry name" value="TOPRIM_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034137">
        <property type="entry name" value="TOPRIM_RecR"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30446">
        <property type="entry name" value="PTHR30446"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02132">
        <property type="entry name" value="RecR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13662">
        <property type="entry name" value="Toprim_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00493">
        <property type="entry name" value="TOPRIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF111304">
        <property type="entry name" value="SSF111304"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00615">
        <property type="entry name" value="recR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01300">
        <property type="entry name" value="RECR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50880">
        <property type="entry name" value="TOPRIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 7" id="KW-0227">DNA damage</keyword>
    <keyword evidence="5 7" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="6 7" id="KW-0234">DNA repair</keyword>
    <keyword evidence="1 7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0862">Zinc</keyword>
    <keyword evidence="3 7" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="Toprim" evidence="8">
        <location>
            <begin position="84"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="C4-type" evidence="7">
        <location>
            <begin position="61"/>
            <end position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00017"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50880"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ71460.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="202" mass="21487" checksum="52476CE1F364B882" modified="2015-12-09" version="1">MAQKQVAGPEIERLIQLLAKLPGLGPRSARRAALHLIKKKDQLLVPLSEAMGIAVRDIGICSVCGTVDTSDPCTICSDDKRDPSVLVVVEDVSDLWALERAGAVNARYHVLGGTLSPLDGVGPDDLNLASLIDRCGAPEIQEVILAISATVEGQTTAHYIMDQLGHLDVHVTKLAHGVPVGGELDYLDEGTLAQALKARTRF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AD98</accession>
    <name>A0A0M7AD98_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">S1 motif domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">ypfD</name>
        <name evidence="4" type="ORF">LAX5112_03242</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72607.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672665.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03242"/>
    <dbReference type="EnsemblBacteria" id="CTQ72607">
        <property type="protein sequence ID" value="CTQ72607"/>
        <property type="gene ID" value="LAX5112_03242"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004518">
        <property type="term" value="F:nuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd05685">
        <property type="entry name" value="S1_Tex"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.650">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3500.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041692">
        <property type="entry name" value="HHH_9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010994">
        <property type="entry name" value="RuvA_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022967">
        <property type="entry name" value="S1_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003029">
        <property type="entry name" value="S1_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044146">
        <property type="entry name" value="S1_Tex"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023323">
        <property type="entry name" value="Tex-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023319">
        <property type="entry name" value="Tex-like_HTH_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018974">
        <property type="entry name" value="Tex-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032639">
        <property type="entry name" value="Tex_YqgF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006641">
        <property type="entry name" value="YqgF/RNaseH-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037027">
        <property type="entry name" value="YqgF/RNaseH-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17674">
        <property type="entry name" value="HHH_9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00575">
        <property type="entry name" value="S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09371">
        <property type="entry name" value="Tex_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16921">
        <property type="entry name" value="Tex_YqgF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00316">
        <property type="entry name" value="S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00732">
        <property type="entry name" value="YqgFc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47781">
        <property type="entry name" value="SSF47781"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50126">
        <property type="entry name" value="S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0540">Nuclease</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="S1 motif" evidence="3">
        <location>
            <begin position="672"/>
            <end position="741"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="739"/>
            <end position="809"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50126"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ72607.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="809" mass="86645" checksum="9A9285CC79421565" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADA8</accession>
    <name>A0A0M7ADA8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03166</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72396.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451029.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03166"/>
    <dbReference type="EnsemblBacteria" id="CTQ72396">
        <property type="protein sequence ID" value="CTQ72396"/>
        <property type="gene ID" value="LAX5112_03166"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010421">
        <property type="entry name" value="TrcR"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06242">
        <property type="entry name" value="DUF1013"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="206"/>
            <end position="248"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72396.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="248" mass="27112" checksum="930144BAED244629" modified="2015-12-09" version="1">MANTPLMPKATAVWLVDNTALSFTQIATFCKLHPLEVKAIADGEAAQGIKGLDPVLTGQLTREEVERAQNDPNYQLKLHGSKVVVPETKRRGPRYTPVSRRQDRPNAILWLVRNHPELKDAQIMRLVGTTKPTIAAIRDRTHWNSANLTPSDPVTLGLCSQLELDIEVEKAAKNAPQPMVGEPAETLMSVDDSTSEDAIAAAFSLDPNTAPKREEEEEIDVDAVFANLNSPKEADGDDETDGDSSNKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADN8</accession>
    <name>A0A0M7ADN8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">PUCC protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02950</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the PucC family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71853.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672464.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02950"/>
    <dbReference type="EnsemblBacteria" id="CTQ71853">
        <property type="protein sequence ID" value="CTQ71853"/>
        <property type="gene ID" value="LAX5112_02950"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06176">
        <property type="entry name" value="MFS_BCD_PucC-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026036">
        <property type="entry name" value="PucC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004896">
        <property type="entry name" value="PucC-rel"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23538">
        <property type="entry name" value="PTHR23538"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03209">
        <property type="entry name" value="PUCC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="37"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="66"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="108"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="137"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="179"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="265"/>
            <end position="283"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="295"/>
            <end position="317"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="329"/>
            <end position="348"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="354"/>
            <end position="377"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="389"/>
            <end position="413"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="433"/>
            <end position="457"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008412"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ71853.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="479" mass="50780" checksum="96A12DA698285081" modified="2015-12-09" version="1">MMFKSASDRMIGFWQTAGVNFMPFADAATKDVPLSRLLRLALFQVSAGCVLVLLTGTLNRVLIVELGVSVALVSAVVAIPVLAAPLRLFFGYRSDTYKSVLGWRRVPYLWFGTILQFGGLAFMPFALLLLESQSVGPAWAGTVLAGLAFLFAGFGLHMSQTAGLALATDLVPQDKRPRVVALLYVMLLAGMIAASIFYSIFLADFSPKRLIQVIQSTALLTLALNVISAWKQEARNPARTSHDRKIAGFFEALADYRREPGTVRLLIAVAIGSAAFSMQDILLEPYGGEILGMTVGQTTLLTALWAAGTMAGFAWAAHSLNRGAHMYRIAARGLLIGIAAFSAIVFASPLETDMLFYGGAAGVGLGGGLFAVCTMLAAMSISKRADSGILVGAWGAVQATAIGVSLLLGGLIKNGVNILALDGLLGSAMNNEAAGYLAVYHIEIALLFICLAVLGPLAGHQYRQERGDDRRFGLAEIPG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AE26</accession>
    <name>A0A0M7AE26_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="10">ComEC family competence protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">LAX5112_03436</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73139.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672843.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03436"/>
    <dbReference type="EnsemblBacteria" id="CTQ73139">
        <property type="protein sequence ID" value="CTQ73139"/>
        <property type="gene ID" value="LAX5112_03436"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004477">
        <property type="entry name" value="ComEC_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025405">
        <property type="entry name" value="DUF4131"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03772">
        <property type="entry name" value="Competence"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13567">
        <property type="entry name" value="DUF4131"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00360">
        <property type="entry name" value="ComEC_N-term"/>
        <property type="match status" value="1"/>
    </dbReference>
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    <feature type="transmembrane region" description="Helical" evidence="7">
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    <feature type="transmembrane region" description="Helical" evidence="7">
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    <feature type="transmembrane region" description="Helical" evidence="7">
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    <feature type="transmembrane region" description="Helical" evidence="7">
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    <feature type="transmembrane region" description="Helical" evidence="7">
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    <feature type="transmembrane region" description="Helical" evidence="7">
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        <source>
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        <source>
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        <source>
            <dbReference type="Pfam" id="PF03772"/>
        </source>
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        <source>
            <dbReference type="Pfam" id="PF13567"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="EMBL" id="CTQ73139.1"/>
        </source>
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        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="831" mass="89190" checksum="59B3C07E049157F2" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEB4</accession>
    <name>A0A0M7AEB4_9HYPH</name>
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        <recommendedName>
            <fullName evidence="11">Coproporphyrinogen-III oxidase</fullName>
            <ecNumber evidence="11">1.3.98.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="primary">hemN_1</name>
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        <name type="scientific">Roseibium alexandrii</name>
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        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 11">
            <text>coproporphyrinogen III + 2 S-adenosyl-L-methionine = 2 5'-deoxyadenosine + 2 CO2 + 2 L-methionine + protoporphyrinogen IX</text>
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            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:17319"/>
            <dbReference type="ChEBI" id="CHEBI:57307"/>
            <dbReference type="ChEBI" id="CHEBI:57309"/>
            <dbReference type="ChEBI" id="CHEBI:57844"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="EC" id="1.3.98.3"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="11 13">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
        <text evidence="11 13">Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.</text>
    </comment>
    <comment type="pathway">
        <text evidence="3 11">Porphyrin-containing compound metabolism; protoporphyrin-IX biosynthesis; protoporphyrinogen-IX from coproporphyrinogen-III (AdoMet route): step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Monomer.</text>
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    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 11">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 11">Belongs to the anaerobic coproporphyrinogen-III oxidase family.</text>
    </comment>
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        <property type="reaction ID" value="UER00323"/>
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        <property type="project" value="UniProtKB-SubCell"/>
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    <keyword evidence="11 15" id="KW-0560">Oxidoreductase</keyword>
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    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
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            <end position="275"/>
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        <ligand>
            <name>S-adenosyl-L-methionine</name>
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            <label>1</label>
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            <position position="56"/>
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        <ligand>
            <name>[4Fe-4S] cluster</name>
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            <position position="60"/>
        </location>
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            <end position="64"/>
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        <ligand>
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        </ligand>
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        <ligand>
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            <end position="109"/>
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    </evidence>
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</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEG9</accession>
    <name>A0A0M7AEG9_9HYPH</name>
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        <submittedName>
            <fullName evidence="2">Inner membrane protein YqaA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yqaA</name>
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    </gene>
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        </lineage>
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            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
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        <property type="protein sequence ID" value="CTQ73545.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03572"/>
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        <property type="gene ID" value="LAX5112_03572"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
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        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="entry name" value="SNARE_assoc"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09335">
        <property type="entry name" value="SNARE_assoc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="35"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="88"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="116"/>
            <end position="137"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73545.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="140" mass="15438" checksum="D3C527DAA7C47EEF" modified="2015-12-09" version="1">MIALFLSSFLAATFFPAQSELGLVYLVTTYPEDLVALIAVASVGNTLGSVVNWAIGLGLIRFAGPAEHSGKASKWYVKAQHWYERYGYWSLLISWAPLVGDPVTLVAGVFREPLWRFFLLVAIAKTVRYIVVAAIALQFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEH3</accession>
    <name>A0A0M7AEH3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DUF4440 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03021</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72044.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72044">
        <property type="protein sequence ID" value="CTQ72044"/>
        <property type="gene ID" value="LAX5112_03021"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027843">
        <property type="entry name" value="DUF4440"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032710">
        <property type="entry name" value="NTF2-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14534">
        <property type="entry name" value="DUF4440"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54427">
        <property type="entry name" value="SSF54427"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF4440" evidence="2">
        <location>
            <begin position="28"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF14534"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ72044.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="145" mass="16305" checksum="0F5BB130593CF165" modified="2015-12-09" version="1">MADNSDFHQTGDEDDPTQNGNGEAEEAIAQLFDDYQSGFNDYDMERICDCFALPTIIWQHEKGHVFNDDEELIENIEVLLKALEKEGVSHSDFQVVSSHVSGPTALVTLDWSQESADGEAVFEFTCHYQLIQDGQDWMIAGIVNE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEK1</accession>
    <name>A0A0M7AEK1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">fixL_1</name>
        <name evidence="7" type="ORF">LAX5112_03037</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72074.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03037"/>
    <dbReference type="EnsemblBacteria" id="CTQ72074">
        <property type="protein sequence ID" value="CTQ72074"/>
        <property type="gene ID" value="LAX5112_03037"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00130">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000014">
        <property type="entry name" value="PAS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000700">
        <property type="entry name" value="PAS-assoc_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035965">
        <property type="entry name" value="PAS-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013767">
        <property type="entry name" value="PAS_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00989">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00091">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55785">
        <property type="entry name" value="SSF55785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00229">
        <property type="entry name" value="sensory_box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50113">
        <property type="entry name" value="PAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50112">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PAS" evidence="5">
        <location>
            <begin position="27"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="domain" description="PAC" evidence="6">
        <location>
            <begin position="104"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="4">
        <location>
            <begin position="174"/>
            <end position="388"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50112"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50113"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ72074.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="394" mass="42747" checksum="A777C50B0F779694" modified="2015-12-09" version="1">MEGRVPSGCGMADDSVIDSGEVAATISDARLDSVFNTAVDGIIVINAKCQILAFNKACEKLFGYSATDLLGENVNRIMPSDYAHHHDSYVQNYLDTGHKKIIGIGREVKGQHKDGTVFPLELSVGEAATSEGRQFIGILRDLRPRKQIEERLSKAQSQLLHMTRLSALDEMGAAIAHELNQPLTAILLYLQSVSRKATADERLTPVMLDVISKAVKEAERASEIIQRMRQLVERKDPERKEVDVDELVATCLEMADLGAIDEPSIMVAKVDKNLPPLMADPVQIRQILINLLRNAREAVAGQAQRKVTLAVCLGADVLEFRVQDNGPGVSQEVADSLFRAFSGAKHKGVGLGLAISRSIAQNHGGDLRLEQSAPGAGASFLLTLPVKIEETGTE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AES1</accession>
    <name>A0A0M7AES1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">CysJI operon transcriptional activator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">cysL_2</name>
        <name evidence="3" type="ORF">LAX5112_03432</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73127.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672842.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03432"/>
    <dbReference type="EnsemblBacteria" id="CTQ73127">
        <property type="protein sequence ID" value="CTQ73127"/>
        <property type="gene ID" value="LAX5112_03432"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00039">
        <property type="entry name" value="HTHLYSR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="5"/>
            <end position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ73127.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="303" mass="33079" checksum="36E662D123D87002" modified="2015-12-09" version="1">MRINFDFGDLEAFLAVMETASFHLAAEQLHLSQSAVTRRIQKLEQVLGSKLFERTTRAVKPTLAAKRLQSRAEEMLDNAEETTLAMRDESVAFAHQKGAVVTIAMIPTLIAPLFLPGLSSMRQADETARIRLMDLSANDVAEAVSSGEADFGICSIGSLEANTHFEPWFDDEIVLAIPIEHQLAAQDNVRWPDLLDEDLILPARGTGNRLLIDDAMAKGRISAQWTYEVGRSTTAMEMVSGGVGIALLPRSAATSTFAQGLRFKKLPKPVVTRPIGLLTRMGVSDTPVVSSVKDSLREYAANI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEU0</accession>
    <name>A0A0M7AEU0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">ParA-like protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03370</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72926.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008195501.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03370"/>
    <dbReference type="EnsemblBacteria" id="CTQ72926">
        <property type="protein sequence ID" value="CTQ72926"/>
        <property type="gene ID" value="LAX5112_03370"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009744">
        <property type="entry name" value="VirC1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07015">
        <property type="entry name" value="VirC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ72926.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="234" mass="25427" checksum="79AA5C6EB39D4943" modified="2015-12-09" version="1">MPVISFANAKGGAGKTTAALLLATEVAARGKRVTIFDADPQKWISKWHELPRTCKGISVVNQISPASITEQITQASETSDYVIVDLEGTENLIVANALSVSDLVVIPIQGSSMDARGGAKILTLIKKLEKIVRQDIRHCVVLTRSNAAVTTRAMKAVQDFLSAQNIDVMMTPIVERAAFRDLFEFGGGLANLDPKMVSGVEKARENASLYAAEVLERAISAPKKRWYNVFRRAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AF18</accession>
    <name>A0A0M7AF18_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">RpoE-regulated lipoprotein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03401</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ73006.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672804.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03401"/>
    <dbReference type="EnsemblBacteria" id="CTQ73006">
        <property type="protein sequence ID" value="CTQ73006"/>
        <property type="gene ID" value="LAX5112_03401"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.460.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010938">
        <property type="entry name" value="DUF1131"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038714">
        <property type="entry name" value="YfeY-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06572">
        <property type="entry name" value="DUF1131"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809304" evidence="1">
        <location>
            <begin position="19"/>
            <end position="195"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73006.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="195" mass="21025" checksum="CFE8805449FB6E52" modified="2015-12-09" version="1">MRSPIVAFLLISAFLITACTPSADLAAPEAAFRTSNVTLLQITEDRVGGITAETAYAPKAIEASLPGFTTEGIQTAVENNTEWALAAFNTDGFQVLQVFKGQNGKVRTVHGVTHHLQGPNAERIGMTFAEIGTARADCRIGRNLWRGMAICESTGHPNVELVFAIPGYTGPFDVLPPAQELFDAQLQRILWTPKT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AF77</accession>
    <name>A0A0M7AF77_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">sn-glycerol-3-phosphate-binding periplasmic protein UgpB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ugpB_3</name>
        <name evidence="7" type="ORF">LAX5112_03573</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the bacterial solute-binding protein 1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73549.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673013.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03573"/>
    <dbReference type="EnsemblBacteria" id="CTQ73549">
        <property type="protein sequence ID" value="CTQ73549"/>
        <property type="gene ID" value="LAX5112_03573"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006059">
        <property type="entry name" value="SBP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13416">
        <property type="entry name" value="SBP_bac_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0574">Periplasm</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="6">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809624" evidence="6">
        <location>
            <begin position="26"/>
            <end position="436"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008520"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ73549.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="436" mass="47619" checksum="DFBC767EDE641C21" modified="2015-12-09" version="1">MAYRKTVASLVAAAALLGTSSASYAATEISWWFAHGGHLGEVVNQIGENYNASQDACQITPVFKGTYEETLTSGIAAFRAGEQPNILQVFDAGAATIIGAKGAVVPAQDILENAGVEFNSEDYIEGVRNFYANSEGKMIGMPFNSSTPILYVNEEALEKAGVEAPKTWEEFQEIAPKLKEAGYTPLAQSHLPWIFTENFKSRHNLQFATNNNGFDGAEGTTLVFGEPIKNHFTAVKGWLDDGLFGYYGTGWGDNQTPFNEGKVAMWLGSSGSFGGIQKTVEFPFSATYLPYWDAVEGAGTGTFIGGGALFAMSGKPEEENKCVASFFEYLTSPEVQYMWHKETGYVPITNAAYELAKKDGHYDRNPAAEVGIKQLTLPGGEWTKGYRMGFYVQIRDIMNREYGRILAGETTVEDAFKNIEADGNKLLERFAKTTSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIE4</accession>
    <name>A0A0M7AIE4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Acetyltransferase (GNAT) family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03838</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74361.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673155.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74361">
        <property type="protein sequence ID" value="CTQ74361"/>
        <property type="gene ID" value="LAX5112_03838"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000835">
        <property type="entry name" value="HTH_MarR-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12802">
        <property type="entry name" value="MarR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00598">
        <property type="entry name" value="HTHMARR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00347">
        <property type="entry name" value="HTH_MARR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50995">
        <property type="entry name" value="HTH_MARR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="HTH marR-type" evidence="1">
        <location>
            <begin position="5"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="domain" description="N-acetyltransferase" evidence="2">
        <location>
            <begin position="157"/>
            <end position="313"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ74361.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="317" mass="34483" checksum="42AAC15286B1B64E" modified="2015-12-09" version="1">MTPQAPHLIEDIRAASRKLVREFGFLEKTIAGTDLSGSGVHAIIEIGLTPGLTAKELGARLKLEKSTISRLLKSLETRGEIVQTQSKTDGRAFQLHLTPKGKDTWIAINRFGDNQARSALANITGVDTATIANALTSYAQALGSDASKAAPDGTQYPVVEGYQTGMIGDISALHARTHGPIVGMGPAFESVVSQAMAEFMPRVDRPMNNSWSVLENEAVIGSITIDGEDLGNNIAHLRWFILSERLRGKGLGKVLLNKALAHCDGRGFDEIHLWTLKGLDAARALYEKNGFDLAEEYLGDQWGHEVMEQKFIRKRPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIH1</accession>
    <name>A0A0M7AIH1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Carnitine catabolism transcriptional activator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">cdhR_6</name>
        <name evidence="3" type="ORF">LAX5112_03935</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74679.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673242.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74679">
        <property type="protein sequence ID" value="CTQ74679"/>
        <property type="gene ID" value="LAX5112_03935"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002818">
        <property type="entry name" value="DJ-1/PfpI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018062">
        <property type="entry name" value="HTH_AraC-typ_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020449">
        <property type="entry name" value="Tscrpt_reg_HTH_AraC-type"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01965">
        <property type="entry name" value="DJ-1_PfpI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00032">
        <property type="entry name" value="HTHARAC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="SSF52317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00041">
        <property type="entry name" value="HTH_ARAC_FAMILY_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="2">
        <location>
            <begin position="200"/>
            <end position="298"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ74679.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="304" mass="33230" checksum="C97FE191D110E612" modified="2015-12-09" version="1">MVSRSYSLAILAYPGCLQSAVLGLQDVLGYAASISEHPVAVETISAFEPGGPSFDAVILPPSAAEVRAADVPELPGYTADQHGKGAVVCSACTGITFVAEAGIAAGRPVTTHWGLEQRLSKRYQEMSFDTDQLLIEYSDLITAGGLMAWVDLGLVVIERFLGYGVAARTAGYFIVDMRRRDQRRFRRFSPHLRHGDAAVLKAQHVIEVRYGDALSVKDIAGASGLPDRTFLRRFKAATGMTPNGYLQELRIERARDLLIETSRTVSEICFSVGYQDPPSFSRLFTKLTGLTPNAFRKHFARRDG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIV1</accession>
    <name>A0A0M7AIV1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">D-malate degradation protein R</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">dmlR_12</name>
        <name evidence="3" type="ORF">LAX5112_03833</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74346.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03833"/>
    <dbReference type="EnsemblBacteria" id="CTQ74346">
        <property type="protein sequence ID" value="CTQ74346"/>
        <property type="gene ID" value="LAX5112_03833"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="58"/>
            <end position="115"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ74346.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="373" mass="40795" checksum="3A1B2D55F06F7DD3" modified="2015-12-09" version="1">MSQTAQLVVTFSAGAVFKLVSGVEHDGLLRFGGDVVPYCVHLKNVVYIVRIFRKFGIMRLDDLEFFIRVAELGSLSGAGREIGLSPSAASARLSNLEKTFGAQLFARTTRKTALTEAGRVLLDHARSAIHELQQARQALEATQDSPQGALRISCNTFFGRKHILPHLVEFRSLYPDVQIEMDISDRMVDVVQEGYDMAIRGAPLADSSLLARRLGGNPRALCASPDYLARKGRPKTPEDLNNHDCISMASVPVWYFDGPDGEVGFELKKPVIKGDSGDLTYDAAIHGLGLSLKSLAHVWEDLRDGRLVAVMEDYPVARVGAIWAVYPPTRFVPPKVSVFVDFLISKYGKPAYWESDYRDAGAAGIGTAPAKSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIY7</accession>
    <name>A0A0M7AIY7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DinB family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03997</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the DinB family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74839.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673289.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03997"/>
    <dbReference type="EnsemblBacteria" id="CTQ74839">
        <property type="protein sequence ID" value="CTQ74839"/>
        <property type="gene ID" value="LAX5112_03997"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.450">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007837">
        <property type="entry name" value="DinB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034660">
        <property type="entry name" value="DinB/YfiT-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37302">
        <property type="entry name" value="PTHR37302"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05163">
        <property type="entry name" value="DinB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF109854">
        <property type="entry name" value="SSF109854"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008635"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74839.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="167" mass="19328" checksum="121CB27AF592EA0D" modified="2015-12-09" version="1">MTTDIAIYQRLAKYNTWMTDKAYVAADMMSDTDRREDRGAFFKSVHSTLNHLLFGDRAWMRHFTGRDYKVGGMGVDIFEDYEALKAAHFEICADIEEFSGGLTSEWLAGTLEWTSRSDGQTRMRPRWLCLTHMFNHQTHHRGQLSTLYMQAGIDIGKTDLPFMPDLM</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJD1</accession>
    <name>A0A0M7AJD1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Epoxyqueuosine reductase</fullName>
            <ecNumber evidence="7">1.17.99.6</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Queuosine biosynthesis protein QueG</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7 10" type="primary">queG</name>
        <name evidence="10" type="ORF">LAX5112_03627</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>AH2 + epoxyqueuosine(34) in tRNA = A + H2O + queuosine(34) in tRNA</text>
            <dbReference type="Rhea" id="RHEA:32159"/>
            <dbReference type="Rhea" id="RHEA-COMP:10345"/>
            <dbReference type="Rhea" id="RHEA-COMP:10346"/>
            <dbReference type="ChEBI" id="CHEBI:13193"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:17499"/>
            <dbReference type="ChEBI" id="CHEBI:82831"/>
            <dbReference type="ChEBI" id="CHEBI:82834"/>
            <dbReference type="EC" id="1.17.99.6"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="7">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
        <text evidence="7">Binds 2 [4Fe-4S] clusters per monomer.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="7">
            <name>cob(II)alamin</name>
            <dbReference type="ChEBI" id="CHEBI:16304"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="7">tRNA modification; tRNA-queuosine biosynthesis.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Monomer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the QueG family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="1.17.99.6" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73694.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03627"/>
    <dbReference type="EnsemblBacteria" id="CTQ73694">
        <property type="protein sequence ID" value="CTQ73694"/>
        <property type="gene ID" value="LAX5112_03627"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00392"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031419">
        <property type="term" value="F:cobalamin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052693">
        <property type="term" value="F:epoxyqueuosine reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008616">
        <property type="term" value="P:queuosine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008033">
        <property type="term" value="P:tRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00916">
        <property type="entry name" value="QueG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017896">
        <property type="entry name" value="4Fe4S_Fe-S-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017900">
        <property type="entry name" value="4Fe4S_Fe_S_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004453">
        <property type="entry name" value="QueG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013542">
        <property type="entry name" value="QueG_DUF1730"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30002">
        <property type="entry name" value="PTHR30002"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08331">
        <property type="entry name" value="DUF1730"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00276">
        <property type="entry name" value="TIGR00276"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00198">
        <property type="entry name" value="4FE4S_FER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51379">
        <property type="entry name" value="4FE4S_FER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="7" id="KW-0846">Cobalamin</keyword>
    <keyword evidence="7" id="KW-0170">Cobalt</keyword>
    <keyword evidence="1 7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 7" id="KW-0408">Iron</keyword>
    <keyword evidence="6 7" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="3 7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7 10" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4 7" id="KW-0671">Queuosine biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 7" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="9">
        <location>
            <begin position="189"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="region of interest" description="Cob(II)alamin binding" evidence="7">
        <location>
            <begin position="251"/>
            <end position="252"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="364"/>
            <end position="383"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="7">
        <location>
            <position position="144"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="65"/>
        </location>
        <ligand>
            <name>cob(II)alamin</name>
            <dbReference type="ChEBI" id="CHEBI:16304"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="144"/>
        </location>
        <ligand>
            <name>cob(II)alamin</name>
            <dbReference type="ChEBI" id="CHEBI:16304"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="168"/>
        </location>
        <ligand>
            <name>cob(II)alamin</name>
            <dbReference type="ChEBI" id="CHEBI:16304"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="179"/>
        </location>
        <ligand>
            <name>cob(II)alamin</name>
            <dbReference type="ChEBI" id="CHEBI:16304"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="198"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="201"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="204"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="208"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="224"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="226"/>
        </location>
        <ligand>
            <name>cob(II)alamin</name>
            <dbReference type="ChEBI" id="CHEBI:16304"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="251"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="254"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="258"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>1</label>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022785"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00916"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51379"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ73694.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="383" mass="42156" checksum="7A3C7CF0CC3EDD1F" modified="2015-12-09" version="1">MGPQLDTKTQKLVTALEAKATALGFDALNITAADSIPNAKERLNVFLEKNYHGSMGWMAETAERRAAPKALWSEVNSVIMLAMNYGPDDAPENHPLAHLSDKGAGGISVYARHRDYHDIIKGRLKELASFLISRAGGDVKVFVDTAPVMEKPLGQAAGLGWQGKHTNLVSRELGSWFFLGSIFTTLELPESGAETDHCGSCKACLDACPTDAFPAPYQLDARRCISYLTIEHAGPIPDEFRKPIGNRIYGCDDCLAACPWNKFAQAASEAKLVAREDLKSPRLADLLRLDDPAFRKLFSGSPIKRIGRNRFLRNVLIAAGNSAKPDLVNSVERLLDDPDETVRGTAVWAWRQLVSTDRFKQKSHAALPSETSAEVRTEWQKQR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJE5</accession>
    <name>A0A0M7AJE5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Acetyltransferase Pat</fullName>
            <ecNumber evidence="2">2.3.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03687</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.3.1.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ73903.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451178.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03687"/>
    <dbReference type="EnsemblBacteria" id="CTQ73903">
        <property type="protein sequence ID" value="CTQ73903"/>
        <property type="gene ID" value="LAX5112_03687"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016746">
        <property type="term" value="F:acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00038">
        <property type="entry name" value="CAP_ED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018490">
        <property type="entry name" value="cNMP-bd-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000595">
        <property type="entry name" value="cNMP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00027">
        <property type="entry name" value="cNMP_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00100">
        <property type="entry name" value="cNMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51206">
        <property type="entry name" value="SSF51206"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50042">
        <property type="entry name" value="CNMP_BINDING_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Cyclic nucleotide-binding" evidence="1">
        <location>
            <begin position="15"/>
            <end position="134"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73903.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="165" mass="18566" checksum="83636162C90DCB34" modified="2015-12-09" version="1">MSLAQDIAILKKIPMFSDFQDDQLRLLAFSAESMDFSAGLRLFDQDERADGGLVITDGMVTLSTRGEDGFEEVDKVGPGTLLGESALLVETKRPCRAEAAEPVRIIRIRRALFKRMVSEYPELAQRLFDQRAARFRTTMGRLKPIGDKMAELEQLNAERRAKEEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJG1</accession>
    <name>A0A0M7AJG1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">N-acetyl-gamma-glutamyl-phosphate reductase</fullName>
            <shortName evidence="1">AGPR</shortName>
            <ecNumber evidence="1">1.2.1.38</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="1">N-acetyl-glutamate semialdehyde dehydrogenase</fullName>
            <shortName evidence="1">NAGSA dehydrogenase</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="1 3" type="primary">argC</name>
        <name evidence="3" type="ORF">LAX5112_03691</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Catalyzes the NADPH-dependent reduction of N-acetyl-5-glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>N-acetyl-L-glutamate 5-semialdehyde + NADP(+) + phosphate = H(+) + N-acetyl-L-glutamyl 5-phosphate + NADPH</text>
            <dbReference type="Rhea" id="RHEA:21588"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29123"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:57936"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="EC" id="1.2.1.38"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1">Amino-acid biosynthesis; L-arginine biosynthesis; N(2)-acetyl-L-ornithine from L-glutamate: step 3/4.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the NAGSA dehydrogenase family. Type 2 subfamily.</text>
    </comment>
    <dbReference type="EC" id="1.2.1.38" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ73913.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673033.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03691"/>
    <dbReference type="EnsemblBacteria" id="CTQ73913">
        <property type="protein sequence ID" value="CTQ73913"/>
        <property type="gene ID" value="LAX5112_03691"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00068">
        <property type="reaction ID" value="UER00108"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003942">
        <property type="term" value="F:N-acetyl-gamma-glutamyl-phosphate reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006526">
        <property type="term" value="P:arginine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01110">
        <property type="entry name" value="ArgC_type2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010136">
        <property type="entry name" value="AGPR_type-2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000534">
        <property type="entry name" value="Semialdehyde_DH_NAD-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01118">
        <property type="entry name" value="Semialdhyde_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00859">
        <property type="entry name" value="Semialdhyde_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01851">
        <property type="entry name" value="argC_other"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="1" id="KW-0055">Arginine biosynthesis</keyword>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="1" id="KW-0521">NADP</keyword>
    <keyword evidence="1 3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Semialdhyde_dh" evidence="2">
        <location>
            <begin position="4"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="active site" evidence="1">
        <location>
            <position position="116"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00859"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ73913.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="316" mass="33355" checksum="464A8DF24A58D321" modified="2015-12-09" version="1">MTARVFIDGEAGTTGLQIRERLAMRRDIELLSIPEDSRKDPAARKDYLNKADVAILCLPDAAAKESVALIENDTTRVIDASSAHRVADGWAYGFAEMDADQADIIAAAMRVANPGCWPQGLIAALRPLIAGGLLPADFPVTINGISGYSGGGKGMIADYDAKGASANMFAPYALGFNHKHLPEMTEYGLLDNGPLFTPAVGNYYKGMLTVVPLNLARLDKVPTGEQIHAALADHFAAAPGGFVDVAPLDGLERSDDLDPQALNDTNRLRLHVFANDARAQAAIIAVYDNLGKGASGAAVQNLNLMLGVDQTTSLAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJN4</accession>
    <name>A0A0M7AJN4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_04187</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75328.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673428.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04187"/>
    <dbReference type="EnsemblBacteria" id="CTQ75328">
        <property type="protein sequence ID" value="CTQ75328"/>
        <property type="gene ID" value="LAX5112_04187"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024163">
        <property type="entry name" value="Aerotolerance_reg_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011933">
        <property type="entry name" value="Double_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025297">
        <property type="entry name" value="DUF4159"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07584">
        <property type="entry name" value="BatA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13709">
        <property type="entry name" value="DUF4159"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="SSF52317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02226">
        <property type="entry name" value="two_anch"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="65"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="628"/>
            <end position="649"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="661"/>
            <end position="680"/>
        </location>
    </feature>
    <feature type="domain" description="BatA" evidence="2">
        <location>
            <begin position="8"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="domain" description="DUF4159" evidence="3">
        <location>
            <begin position="702"/>
            <end position="919"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07584"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF13709"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ75328.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="939" mass="101010" checksum="2D4BCE78303E7893" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKD1</accession>
    <name>A0A0M7AKD1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">4-formylbenzenesulfonate dehydrogenase TsaC1/TsaC2</fullName>
            <ecNumber evidence="1">1.2.1.62</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">tsaC1_2</name>
        <name evidence="1" type="ORF">LAX5112_04303</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.2.1.62" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000022">
        <property type="protein sequence ID" value="CTQ75615.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673532.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000022.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04303"/>
    <dbReference type="EnsemblBacteria" id="CTQ75615">
        <property type="protein sequence ID" value="CTQ75615"/>
        <property type="gene ID" value="LAX5112_04303"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018482">
        <property type="term" value="F:4-formylbenzenesulfonate dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ75615.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="246" mass="25600" checksum="A988CFE1F2595B5A" modified="2015-12-09" version="1">MRLQGKTAIVTGGASGFGAGIVRKFAAEGAKVLIADLNLDLAEDVAAEVGGFAAKADVASNDSVSELAQTAASKIGGVDILVNNAGITHLPKPMQEVTEDEFDRVMAVNCKSVYLMAKHFVPGMIDSGSGAILNVASTAGLSPRPNLNWYNASKGWMITATKTMAVELAPKGVRVNALCPVAGETPLLKSFMGEDTPEMRVKFLSTIPIGRFSTPEDLGNAACYLCSDEASMITGVAMEVDGGRCI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALJ4</accession>
    <name>A0A0M7ALJ4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04219</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75411.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75411">
        <property type="protein sequence ID" value="CTQ75411"/>
        <property type="gene ID" value="LAX5112_04219"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ75411.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="92" mass="10537" checksum="D64C7AB2E68E84F9" modified="2015-12-09" version="1">MPVLTRWLTLFTYPRGMHFPGFCGFYTIPKAERVLIAPTTVTLQSQPALILEAARNAPELSLHCHIYSYKNVGKLISAIWRRVWYVSSAKQN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALW9</accession>
    <name>A0A0M7ALW9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04394</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75879.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_050776074.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000023.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04394"/>
    <dbReference type="EnsemblBacteria" id="CTQ75879">
        <property type="protein sequence ID" value="CTQ75879"/>
        <property type="gene ID" value="LAX5112_04394"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="15"/>
            <end position="35"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75879.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="65" mass="7212" checksum="BD3B5B14CF83DDDB" modified="2015-12-09" version="1">MIEDLTAHVMARGDLAHLALFLWAATATLIGLVLIRELAISNQRFSDFVSEVARLNRYLAELGTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AM46</accession>
    <name>A0A0M7AM46_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04424</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75959.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75959">
        <property type="protein sequence ID" value="CTQ75959"/>
        <property type="gene ID" value="LAX5112_04424"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="268"/>
            <end position="293"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75959.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="327" mass="34421" checksum="827309C08F18C146" modified="2015-12-09" version="1">MRGQAFTFTHRGFCYALVPKHVVGGRGRLSVMTGVPPRTGTADIRLRLADTDMALASVTGLRREDCGSDIDALRDTLRPVLTGSAPATLTTVLPGGEPETIDVTVALADYERIEVQAVRPGDRSRIAPGDSGALIAVRGVPVALGIKLLDAGTANERVLALRLDDLKARIVRFLSDGALGAASVAAPDAAVAFEVVEWSGRPLDPDLDPRGLVSPGGAPFVAEHGGREVRLVLRLTGEGGRAPVVSGVRIEGGGAEGATAPKTLRLRQPRRQADPTPRRLNTGSIAADGRGTVPVSPRRMEWLEVTVTGVWDPQRPLSIETLTVLGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AM51</accession>
    <name>A0A0M7AM51_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04524</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000025">
        <property type="protein sequence ID" value="CTQ76218.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04524"/>
    <dbReference type="EnsemblBacteria" id="CTQ76218">
        <property type="protein sequence ID" value="CTQ76218"/>
        <property type="gene ID" value="LAX5112_04524"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1530.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038770">
        <property type="entry name" value="Na+/solute_symporter_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="37"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="70"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="102"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="131"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="163"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="196"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="228"/>
            <end position="252"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="272"/>
            <end position="290"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="296"/>
            <end position="315"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76218.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="324" mass="34207" checksum="F6FFAAE0802FB21D" modified="2015-12-09" version="1">MIRMLAVAVAWIGQHGTAALAVSIFIGMALPALSEHLRPYLGVSVFSLLVLAFLRVDIEAIKLRLKRPTLLLTALVWMMLGVPLIAFAAVQLIGPETLGPQLVLALFISTAAPPVMAAPAFIYLLGLNGTLSLALSVAALIITPLSAPFIGELMLGDALPLSIGGLAAQLSFLLVGSFLTAMVVRKIAGQERITNGANMISGLNVILLLIFAIAAMDGVAASFADKLTFTLGLTAITFCLAFAQIGVTLLLFSPASREDAYAIAHTCGTRNMGLMVAAFGGTLPELTWLWFAVGQFPIYILPMVLKPFVGWFCGLKLKSVTPQT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMD0</accession>
    <name>A0A0M7AMD0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04367</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75807.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673588.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000023.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75807">
        <property type="protein sequence ID" value="CTQ75807"/>
        <property type="gene ID" value="LAX5112_04367"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="37"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="77"/>
            <end position="94"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75807.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="107" mass="11616" checksum="D44D23503DCDC144" modified="2015-12-09" version="1">MKNHIRASYLGSISALGVATCCVLPMAMMLLGLGGSWLAIFGTIAAASFYVLGLSTLMVLAAWLVTYRKGSLLQLKWWLAGSTTLTALAWVIVFNETRINDFLITLM</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AN03</accession>
    <name>A0A0M7AN03_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative ATPase (AAA+ superfamily)</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04071</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ74984.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673349.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04071"/>
    <dbReference type="EnsemblBacteria" id="CTQ74984">
        <property type="protein sequence ID" value="CTQ74984"/>
        <property type="gene ID" value="LAX5112_04071"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008533">
        <property type="entry name" value="DUF815"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05673">
        <property type="entry name" value="DUF815"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF815" evidence="1">
        <location>
            <begin position="36"/>
            <end position="284"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF05673"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74984.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="290" mass="32169" checksum="1E709D923F29D269" modified="2015-12-09" version="1">MSAPSDIAALNEKLDSLIDLISRAVPAAPVPADFEAADAFVWSPNPGELMPVAKVNRVDIALLCAVSHVRDLLLDNTRRFAKGLPANNVLLWGARGMGKSSLVKAAQAAVNTELGSSTLKLIEIHREDIESLPKLMTQIRMAPYRFIVFCDDLSFDHDDTSYKSLKAVLEGGIEGRPENVLFYATSNRRHLLPRDMMENERSTAINPSEAVEEKVSLSDRFGLWLGFHKCSQDDYLDMVRGYASHYGLDIDEEKLRAEALEWSTTRGSRSGRVAYQFIQDLAGRLGKSLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANN5</accession>
    <name>A0A0M7ANN5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Lipid A core-O-antigen ligase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04696</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000028">
        <property type="protein sequence ID" value="CTQ76748.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673877.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000028.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76748">
        <property type="protein sequence ID" value="CTQ76748"/>
        <property type="gene ID" value="LAX5112_04696"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016874">
        <property type="term" value="F:ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0436">Ligase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="30"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="58"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="88"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="117"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="143"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="181"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="204"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="227"/>
            <end position="245"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="252"/>
            <end position="271"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="351"/>
            <end position="370"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="382"/>
            <end position="404"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="410"/>
            <end position="428"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76748.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="455" mass="49825" checksum="D8B10E7D9FF5F631" modified="2015-12-09" version="1">MKIAFVLIVLCCTLPLALLVRRYETLTRIFWISFGAAAFFMTSIPLLDIGVVNAPDGWVGFVYGIEISIVDYLAVVAFFILPRHRTSWLLFLPFVVFTAVAATSIPNAANPTVASFGVWQFAKMAFVAAIVARACAFEEVPYLLLRGMAIGIMAQLVASLWQRFGLGYAQAPGLFLHQNTLGMIAHFVLYPFLFMLLTQSRGTIWNGLVILTVLCCMLLTASRGAVGFTVIGIGLTFVLVALTGLTNRIMAAAALAGIAALALAPATYLVFEKRFERAALSEDVYDERAAFNRAADLIRDDFPTGVGFNHYTHTLKRYNYSQLAGVHQNEGNINNIVHDVYRLIGVETGRAGLLSFYALLAVPLVSAFFVGWRRRSMPDGGLLLGFGTAMLIAYLHSLFEWIFLIKQVQIVFAIVVGMTFGIASRRYADETSIHHSVASENTVGTLTFKAGALSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANW3</accession>
    <name>A0A0M7ANW3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Murein L,D-transpeptidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04520</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000025">
        <property type="protein sequence ID" value="CTQ76211.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04520"/>
    <dbReference type="EnsemblBacteria" id="CTQ76211">
        <property type="protein sequence ID" value="CTQ76211"/>
        <property type="gene ID" value="LAX5112_04520"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045380">
        <property type="entry name" value="LD_TPept_scaffold_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20142">
        <property type="entry name" value="Scaffold"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Scaffold" evidence="1">
        <location>
            <begin position="56"/>
            <end position="192"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF20142"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76211.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="541" mass="60707" checksum="78C6D2B87EF30273" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AP99</accession>
    <name>A0A0M7AP99_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">NADPH dehydrogenase</fullName>
            <ecNumber evidence="3">1.6.99.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">namA</name>
        <name evidence="3" type="ORF">LAX5112_04302</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.6.99.1" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000022">
        <property type="protein sequence ID" value="CTQ75613.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673559.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000022.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04302"/>
    <dbReference type="EnsemblBacteria" id="CTQ75613">
        <property type="protein sequence ID" value="CTQ75613"/>
        <property type="gene ID" value="LAX5112_04302"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071949">
        <property type="term" value="F:FAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010181">
        <property type="term" value="F:FMN binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050661">
        <property type="term" value="F:NADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003959">
        <property type="term" value="F:NADPH dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018548">
        <property type="term" value="F:pentaerythritol trinitrate reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd02932">
        <property type="entry name" value="OYE_YqiM_FMN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002938">
        <property type="entry name" value="FAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001155">
        <property type="entry name" value="OxRdtase_FMN_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044152">
        <property type="entry name" value="YqjM-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43303">
        <property type="entry name" value="PTHR43303"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01494">
        <property type="entry name" value="FAD_binding_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00724">
        <property type="entry name" value="Oxidored_FMN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FAD_binding_3" evidence="2">
        <location>
            <begin position="4"/>
            <end position="300"/>
        </location>
    </feature>
    <feature type="domain" description="Oxidored_FMN" evidence="1">
        <location>
            <begin position="404"/>
            <end position="733"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00724"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01494"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ75613.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="773" mass="86078" checksum="FCC1E3C87F00C3DB" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APF5</accession>
    <name>A0A0M7APF5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04700</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000028">
        <property type="protein sequence ID" value="CTQ76759.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76759">
        <property type="protein sequence ID" value="CTQ76759"/>
        <property type="gene ID" value="LAX5112_04700"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="16"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="71"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="111"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="138"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="188"/>
            <end position="210"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="222"/>
            <end position="243"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76759.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="300" mass="33834" checksum="0ED8F3940487DADA" modified="2015-12-09" version="1">MDTSLASENDLTRNTALAAVAVVRSVMGFAAAIFLLIAVAAPRIEASSWFKRRLSEGSAFPLNYEISQRRLFNTSLVIAGTAIALAVTYVAVAEAVFNQGTLDWINYKDGFLEWSSAAILVGSSILALVFARQMPTKSLKWMHFFLALLFFVMFGEEISWGERQIGFQTPEQLGSTNVQNEVNLHNSFGYLFDHLFILCFFIWGCVVPALHRIDPIWRWFQSRLGLPFPSVGLALAMFAVSLFQPELTDRFIGDVPRLRVAELRETLSALCFLLLMWESRTLTAAMDDRRHTPFHRDKPI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQI6</accession>
    <name>A0A0M7AQI6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Macrolide export ATP-binding/permease protein MacB</fullName>
            <ecNumber evidence="10">3.6.3.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">macB_1</name>
        <name evidence="10" type="ORF">LAX5112_04620</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ABC-4 integral membrane protein family. LolC/E subfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.-" evidence="10"/>
    <dbReference type="EMBL" id="CXWD01000027">
        <property type="protein sequence ID" value="CTQ76520.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673807.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000027.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04620"/>
    <dbReference type="EnsemblBacteria" id="CTQ76520">
        <property type="protein sequence ID" value="CTQ76520"/>
        <property type="gene ID" value="LAX5112_04620"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003838">
        <property type="entry name" value="ABC3_permease_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025857">
        <property type="entry name" value="MacB_PCD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02687">
        <property type="entry name" value="FtsX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12704">
        <property type="entry name" value="MacB_PCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="10" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="21"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="280"/>
            <end position="304"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="325"/>
            <end position="355"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="367"/>
            <end position="386"/>
        </location>
    </feature>
    <feature type="domain" description="MacB_PCD" evidence="9">
        <location>
            <begin position="20"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="domain" description="FtsX" evidence="8">
        <location>
            <begin position="309"/>
            <end position="391"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005236"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF02687"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF12704"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ76520.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="403" mass="42958" checksum="4E5399EC6AFE3F3E" modified="2015-12-09" version="1">MLWDMTKLALKSIFRNALRSCLTVLGVVIGVASVIAMLTLGQGSSEQVIADVEKMGTNVIVVRPGQRGMGPRANSTAARPFDIKDVDALEEALPEIDVAAPISSLHGTIVAGNENHRAQITATDQRYLVASDWPLALGRNFNASETRSGRPVCILGQTVRQELFGTADPLDQPVRIKKMTCNVIGVLSEKGASSIGADQDDVVLVPLRTYQRRLTGKDDVSVIYMSVINGISTGQVIREVENLMRELRRIGPGDEDDFSVIDMKQVASMLTSITGVLTGLLSAVAAVSLLVGGIGIMNIMLVSVTERTREIGIRLAVGAQTHQVLMQFLIEAVALSLLGGLVGIALGLGLAAIGAHWIDIPFMPDPGVILLAFVFSAIVGATFGYYPARVAADLDPIEALRHE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQP0</accession>
    <name>A0A0M7AQP0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Cyclic di-GMP phosphodiesterase Gmr</fullName>
            <ecNumber evidence="4">3.1.4.52</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">gmr_15</name>
        <name evidence="4" type="ORF">LAX5112_04471</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.4.52" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ76113.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04471"/>
    <dbReference type="EnsemblBacteria" id="CTQ76113">
        <property type="protein sequence ID" value="CTQ76113"/>
        <property type="gene ID" value="LAX5112_04471"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071111">
        <property type="term" value="F:cyclic-guanylate-specific phosphodiesterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd01948">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01949">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.450">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001633">
        <property type="entry name" value="EAL_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035919">
        <property type="entry name" value="EAL_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000160">
        <property type="entry name" value="GGDEF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00563">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00990">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00052">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00267">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141868">
        <property type="entry name" value="SSF141868"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00254">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50883">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50887">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="34"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="289"/>
            <end position="312"/>
        </location>
    </feature>
    <feature type="domain" description="GGDEF" evidence="3">
        <location>
            <begin position="363"/>
            <end position="496"/>
        </location>
    </feature>
    <feature type="domain" description="EAL" evidence="2">
        <location>
            <begin position="505"/>
            <end position="752"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ76113.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="752" mass="83161" checksum="7D8141B1AA7DF3FE" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AR54</accession>
    <name>A0A0M7AR54_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">MscS family inner membrane protein YnaI</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">ynaI</name>
        <name evidence="9" type="ORF">LAX5112_04690</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the MscS (TC 1.A.23) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000028">
        <property type="protein sequence ID" value="CTQ76730.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673872.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000028.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04690"/>
    <dbReference type="EnsemblBacteria" id="CTQ76730">
        <property type="protein sequence ID" value="CTQ76730"/>
        <property type="gene ID" value="LAX5112_04690"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010920">
        <property type="entry name" value="LSM_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006685">
        <property type="entry name" value="MscS_channel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011066">
        <property type="entry name" value="MscS_channel_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006686">
        <property type="entry name" value="MscS_channel_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011014">
        <property type="entry name" value="MscS_channel_TM-2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023408">
        <property type="entry name" value="MscS_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00924">
        <property type="entry name" value="MS_channel"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50182">
        <property type="entry name" value="SSF50182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82689">
        <property type="entry name" value="SSF82689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82861">
        <property type="entry name" value="SSF82861"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01246">
        <property type="entry name" value="UPF0003"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0346">Stress response</keyword>
    <keyword evidence="4 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="36"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="121"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="160"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="187"/>
            <end position="207"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008017"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ76730.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="394" mass="43609" checksum="2433903A8C4B0EDF" modified="2015-12-09" version="1">MHPAPSIVEGKEGGCGDKLDQLFKYLADFAGKFESWWTLIDADGLLLSSAVLIVVILLRKALSGFAVRTMDFIASRIQITLGDAVKDAIEPALRALIIALAFYGVLEALHLPGILDQTLERIVVSVAVAATFAAAFVLVDVSVAWIVPAKDQVHGLQMSWLTKILKAATLIIALSAVLKVWDIDLGPVLTGMGVLGAGVALAAQDLFRNLIAGMASMGEKRFDIGDWVRVEGVVEGIVEKMELRSTLIRQFDRAAVHVPNADLANSVLINFTRRPYRRIYWDIKLVYDTSAEQLNQIRSETEKYIDESNDFASPDRASRYIRIDAFDESSINIMIWCFTNTIDYATYLEAKERLLLEIKRIVEEAGSSFAFPTRTILAENPSATAETERDLQQR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AR84</accession>
    <name>A0A0M7AR84_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Acyl-CoA dehydrogenase</fullName>
            <ecNumber evidence="9">1.3.99.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">acdA_4</name>
        <name evidence="9" type="ORF">LAX5112_04464</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 5">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the acyl-CoA dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.3.99.-" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ76094.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673667.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000024.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04464"/>
    <dbReference type="EnsemblBacteria" id="CTQ76094">
        <property type="protein sequence ID" value="CTQ76094"/>
        <property type="gene ID" value="LAX5112_04464"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016627">
        <property type="term" value="F:oxidoreductase activity, acting on the CH-CH group of donors"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.540.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006091">
        <property type="entry name" value="Acyl-CoA_Oxase/DH_mid-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046373">
        <property type="entry name" value="Acyl-CoA_Oxase/DH_mid-dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036250">
        <property type="entry name" value="AcylCo_DH-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009075">
        <property type="entry name" value="AcylCo_DH/oxidase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013786">
        <property type="entry name" value="AcylCoA_DH/ox_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037069">
        <property type="entry name" value="AcylCoA_DH/ox_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009100">
        <property type="entry name" value="AcylCoA_DH/oxidase_NM_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00441">
        <property type="entry name" value="Acyl-CoA_dh_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02770">
        <property type="entry name" value="Acyl-CoA_dh_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02771">
        <property type="entry name" value="Acyl-CoA_dh_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47203">
        <property type="entry name" value="SSF47203"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56645">
        <property type="entry name" value="SSF56645"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0274">FAD</keyword>
    <keyword evidence="3 5" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="5 9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Acyl-CoA_dh_N" evidence="8">
        <location>
            <begin position="6"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="domain" description="Acyl-CoA_dh_M" evidence="7">
        <location>
            <begin position="125"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="domain" description="Acyl-CoA_dh_1" evidence="6">
        <location>
            <begin position="242"/>
            <end position="377"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009347"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU362125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00441"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF02770"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF02771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ76094.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="378" mass="40154" checksum="509DCD5DD67DF79E" modified="2015-12-09" version="1">MNFNYSEEQSLISDSLGKLLSDGCSQAARRALIAEEQYHDPAIWSALGELGMLGLPIAEAYAGVGGTAVDTMVAAVEFGRHLSLEPFTASVVLGGGALQLAGTEDQKKAFLPGIADGSKRAAVGFLEPESRFDLSSVTTRAEPDGDGYRLTGRKTAVIGAPPADILIVSARTSGATAEPEGLSVFVVRPAASGVEIKPYRFADGRTGADIVLNSVQVAASDMLGPKDKAGDIIEHVADLGTAALCAEALGALEKIIAMTTEYLKVRTQFGRPIGEFQALQHQLAEMTIDFEHAKSLVFEAAMTADSPDAPLRKKAVSAAKVYLGERGRVICQNAIQMHGGIGMTDEYELGDYVKRAMFAEKAFGDTDHHLERYARQMT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASI9</accession>
    <name>A0A0M7ASI9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Lysine-arginine-ornithine-binding periplasmic protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_04981</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000037">
        <property type="protein sequence ID" value="CTQ77617.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04981"/>
    <dbReference type="EnsemblBacteria" id="CTQ77617">
        <property type="protein sequence ID" value="CTQ77617"/>
        <property type="gene ID" value="LAX5112_04981"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809631" evidence="2">
        <location>
            <begin position="25"/>
            <end position="249"/>
        </location>
    </feature>
    <feature type="domain" description="PBPb" evidence="3">
        <location>
            <begin position="27"/>
            <end position="246"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00497"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ77617.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="249" mass="27854" checksum="C2078EB2859191CE" modified="2015-12-09" version="1">MKIKALRVFALFILLALIALPAKAEHITIVTEHLPPYNFLEDGEALGMSTEVVQAALDAAGHTYEIRFMPWARAYQIALTKPNTLVYSIARTTEREALFAWVGEIAPFGASLYQRADQPVIKLSELSDARLLQVGVYRGDAKEAVLRKNGFQNLQTTEDDHLNLRKLMLGRIDLIAIDDSVIGPLLAEEGIASNKVRRTLGIDEVSGHLYMAFHKETDPDLVISVQRGLELIKENGQYEQILNQYLLIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASN5</accession>
    <name>A0A0M7ASN5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Mu-like prophage I protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04906</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000034">
        <property type="protein sequence ID" value="CTQ77426.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674049.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000034.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04906"/>
    <dbReference type="EnsemblBacteria" id="CTQ77426">
        <property type="protein sequence ID" value="CTQ77426"/>
        <property type="gene ID" value="LAX5112_04906"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012106">
        <property type="entry name" value="Phage_Mu_Gp1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10123">
        <property type="entry name" value="Mu-like_Pro"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF016624">
        <property type="entry name" value="Mu_prophg_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="149"/>
            <end position="169"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77426.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="337" mass="36372" checksum="08563F01E03F1895" modified="2015-12-09" version="1">MTNTSPIAAIAIALNTGEEGTVPEWIQLLPAGQTVAGYDGRTWLNDRPEDLLTMFDRRPSGLPIDFEHGTEEWPDGKAKDIAGYIVELDLKDDGSLWGKADWTELGREKVGSRQYRHVSPAFFYEINTNRILELTSVALTVDPNLQLTALNRRGPSPEPNTSESTMDKEKRRALCRSLGLADEASDDAIIKAVEELDAGKAKAENAAQMPDVEKFVPRSDYDKVVSDRDTALNSLKQTADAEIADLVDQAIKDGKIAPASKDYHLAACRSGAEGLTSFKAFIEGAPVLAMAENSGLDTVDPGKGKAALSADQKKIADQLGLSHDDFAKDLASDKGAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASY0</accession>
    <name>A0A0M7ASY0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">SelT/selW/selH selenoprotein domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04740</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000029">
        <property type="protein sequence ID" value="CTQ76893.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673909.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000029.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76893">
        <property type="protein sequence ID" value="CTQ76893"/>
        <property type="gene ID" value="LAX5112_04740"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011893">
        <property type="entry name" value="Selenoprotein_Rdx-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10262">
        <property type="entry name" value="Rdx"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02174">
        <property type="entry name" value="CXXU_selWTH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ76893.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="99" mass="11104" checksum="95C68D05210DFCF4" modified="2015-12-09" version="1">MQDIPAPHIIITYCRQCNWLLRSAWMAQEILSSFSEEVGAVTLVPGTGGTFTIKCDGTPVWNRKTDGGFPEAKILKQRLRDLLWPDKDLGHSDTTSSRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ATF1</accession>
    <name>A0A0M7ATF1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Putative acyl--CoA ligase YhfT</fullName>
            <ecNumber evidence="4">6.2.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">yhfT</name>
        <name evidence="4" type="ORF">LAX5112_04789</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="6.2.1.-" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000031">
        <property type="protein sequence ID" value="CTQ77063.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673953.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000031.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04789"/>
    <dbReference type="EnsemblBacteria" id="CTQ77063">
        <property type="protein sequence ID" value="CTQ77063"/>
        <property type="gene ID" value="LAX5112_04789"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016874">
        <property type="term" value="F:ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12780">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025110">
        <property type="entry name" value="AMP-bd_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045851">
        <property type="entry name" value="AMP-bd_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000873">
        <property type="entry name" value="AMP-dep_Synth/Lig"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042099">
        <property type="entry name" value="ANL_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00501">
        <property type="entry name" value="AMP-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13193">
        <property type="entry name" value="AMP-binding_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0007">Acetylation</keyword>
    <keyword evidence="4" id="KW-0436">Ligase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AMP-binding" evidence="2">
        <location>
            <begin position="9"/>
            <end position="377"/>
        </location>
    </feature>
    <feature type="domain" description="AMP-binding_C" evidence="3">
        <location>
            <begin position="386"/>
            <end position="461"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022990"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF13193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ77063.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="486" mass="52723" checksum="A103630E194AB0CA" modified="2015-12-09" version="1">MGYIGEHLEKRARASMAGPALKTGGRGHSWEEFLSSVQEREQLLWDNSPEGAQIALLLADPTDILVSFFACARSGRTALVMDPSWPHHQIETVLMAVQPAFCLDDESLARSVATQDDERSSRPVDPPLETAEFYAGFTSGSTGMPKGFVRSHRSWLESFRLSEPDFEDIEPARIIILGGLSHSLHLYGAVHGLHRGTPVTVLSRFEPRAVLEVLQTEAGIAALYATPTQLQLIAEAARRSGSPKAMRLVFSSGAKWPDGAKSAFAEVFPKARLVEFYGASETSFISFARSGDGTTAGSVGRPPTGVSVAIGNPDQQLLSGTPGPIWVKSPLLFNRYVCGEAPETVWQGDWVTIGDHGYVDDAGYLFVTGRQNRMVITSGLNVYPEEIETVLMSHPAVKAAAVFGVTDALRGERLEAVVELHLELEDPAQTLVDHCRRFAGRAKCPKRFHMKDKFPLTAGGKPDLQALKREFGVSAAPASVLEGKNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AVG7</accession>
    <name>A0A0M7AVG7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">gchK</name>
        <name evidence="4" type="ORF">LAX5112_04964</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000037">
        <property type="protein sequence ID" value="CTQ77584.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674102.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000037.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77584">
        <property type="protein sequence ID" value="CTQ77584"/>
        <property type="gene ID" value="LAX5112_04964"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004673">
        <property type="term" value="F:protein histidine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043836">
        <property type="entry name" value="DHp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19191">
        <property type="entry name" value="HEF_HK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0418">Kinase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Histidine kinase" evidence="3">
        <location>
            <begin position="147"/>
            <end position="364"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ77584.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="370" mass="42615" checksum="776C24DB98510AAC" modified="2015-12-09" version="1">MYLWRRPTGFYFQLRVPKTFRVYLSSEVRSGADGFREQAVQRTKESIRTVKEIIEAKLIEFERTVGSDMPPDEVARVQLEIEREIQSTTERQSEILQRLVDQLSQLSAEEDLDTSEILAAMESDLEDRRAREEENLQLAQMGQAIGIVHHEFNSVIRSVRRNVRRLEPWAQRNEKLRKLYEEISESYAHLDSYLSLFAPLSRRLSQTKRIISGGDISNYLQELLGDRMHRHEIDLVTTEAFKSVEVEAYVSTLYPAFVNIVDNALFWVTHGEHVRTTASPSEREKRVVLDYADGEFVIYDTGPGVLPVDELAIFETGFSRKPKGSGLGLSITRELLDRQGYHLTLDSYRVGRGATFRIRLPANAFPDDEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZMD3</accession>
    <name>A0A0M6ZMD3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Homoserine/homoserine lactone efflux protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">rhtB_1</name>
        <name evidence="6" type="ORF">LAX5112_00114</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63919.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00114"/>
    <dbReference type="EnsemblBacteria" id="CTQ63919">
        <property type="protein sequence ID" value="CTQ63919"/>
        <property type="gene ID" value="LAX5112_00114"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006865">
        <property type="term" value="P:amino acid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001123">
        <property type="entry name" value="LeuE-type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30086">
        <property type="entry name" value="PTHR30086"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01810">
        <property type="entry name" value="LysE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006324">
        <property type="entry name" value="LeuE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="20"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="48"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="89"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="131"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="164"/>
            <end position="182"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ63919.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="187" mass="19962" checksum="6A6D8BEC11DA3773" modified="2015-12-09" version="1">MTLFMSKTLTQGRKAGIAAVLGATTGLIIHTILAAIGISALLAASATAFTVLKFVGAAYLIWLAIQALRKGTSITLEAAESKTQPFRRVWLQGLGVNILNPKIVLFFVTFLPQFVSASDPHATAKLLFFGGYFVLLGMPICVLMVLGAGAFSRFLKSSPTFMRAFDWLFAGIMGTFALKLLVAKANA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZNG4</accession>
    <name>A0A0M6ZNG4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00023</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63660.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670086.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ63660">
        <property type="protein sequence ID" value="CTQ63660"/>
        <property type="gene ID" value="LAX5112_00023"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ63660.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="473" mass="51312" checksum="50727752D0C77361" modified="2015-12-09" version="1">MTTTTTQTIGNRNFNTSANSPFGFGNGKWTATDNSDGYLGNYGANEDVTKTVTVPNGTSELLLKFDFLEVDSWDNEHLYVDINGVTVDLGAFHVYTTEGTHGWQTADDNITYRKTAASTASDFTNEGWVDQRHTYEIELPGSVVTDGQLSIKWHSSLNQASNDEAFGIDNFLLTATVLQADTNDYSDARSAIQEIDMFSIGSQQLGSLYDTFATRLELMKDGAFDLGEEMGLDLGNLTNSQVLQLETDATAALNTWSAANNGFDEWGELLWQEMYDQYGVINGNDGVDLMRGLSILTATAGFLTGGLTGAGALGIATTSLNVFAAFVEETGEHYPSTPIPLQTFTMDEALESLYSELSSRNFNSDAATLKTAADTAAQEMVDFMTNSQLANYVGEMMAGGVNRLSYKSKMEALGFDVDSGYHRADIGPGGPIGDSYSWMRIEDGSADIIGVDSIYFRYNGSTGTGFNYDIDFT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZNJ1</accession>
    <name>A0A0M6ZNJ1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Arginine transport ATP-binding protein ArtM</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">artM</name>
        <name evidence="5" type="ORF">LAX5112_00070</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63801.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008193384.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00070"/>
    <dbReference type="EnsemblBacteria" id="CTQ63801">
        <property type="protein sequence ID" value="CTQ63801"/>
        <property type="gene ID" value="LAX5112_00070"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032823">
        <property type="entry name" value="BCA_ABC_TP_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12399">
        <property type="entry name" value="BCA_ABC_TP_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="4"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="36"/>
            <end position="43"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ63801.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="251" mass="27177" checksum="368F007383352BCC" modified="2015-12-09" version="1">MEILKVEGVNKSFGGLRALNNVNFSVEEGTVHAIIGPNGAGKSTFLNCMIGRLAPDTGTVMFGDISLTGMKPHEINQVGVSRVFQTPEIFGDLTLMENIMIPAFAKRDGEFALHAFARVDQDAEIRDKAMHMLEDVGLAEKHSTTASSLSRGDKRRLELAMCLSQDPKLLLLDEPTAGMSRADTNNTIDLLKRIGDRGITKVVIEHDMHVVFSLAEKVSVLAQGAIIAEGKPEDIKGDPKVQEAYLGGAHL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZNM0</accession>
    <name>A0A0M6ZNM0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Cold shock-like protein CspA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">cspA_1</name>
        <name evidence="2" type="ORF">LAX5112_00081</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63831.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008195514.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00081"/>
    <dbReference type="EnsemblBacteria" id="CTQ63831">
        <property type="protein sequence ID" value="CTQ63831"/>
        <property type="gene ID" value="LAX5112_00081"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd04458">
        <property type="entry name" value="CSP_CDS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011129">
        <property type="entry name" value="CSD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002059">
        <property type="entry name" value="CSP_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00313">
        <property type="entry name" value="CSD"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00050">
        <property type="entry name" value="COLDSHOCK"/>
    </dbReference>
    <dbReference type="SMART" id="SM00357">
        <property type="entry name" value="CSP"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51857">
        <property type="entry name" value="CSD_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CSD" evidence="1">
        <location>
            <begin position="25"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="domain" description="CSD" evidence="1">
        <location>
            <begin position="117"/>
            <end position="182"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ63831.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="193" mass="21296" checksum="3E3C8E5AB27CEED9" modified="2015-12-09" version="1">MGVKAARDPRALEDLTEDVAVDVFEVAGTIKWFDVGKGYGFIVPDSGETDILLHVTCLRRDGFQTAYEGARVVCEVLDRPRGLQAFRILSMDESTAVHPSQLPPSRTHVQVVPETGFETATVKWFNRVKGFGFLTQGEGTEDIFIHMETLRRYGITELRPGQEVLVRFGTGPKGRMAAEIRPVGSGTHIPASH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZP82</accession>
    <name>A0A0M6ZP82_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcriptional activator ChrR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">chrR</name>
        <name evidence="2" type="ORF">LAX5112_00118</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63930.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00118"/>
    <dbReference type="EnsemblBacteria" id="CTQ63930">
        <property type="protein sequence ID" value="CTQ63930"/>
        <property type="gene ID" value="LAX5112_00118"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd20301">
        <property type="entry name" value="cupin_ChrR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.1320">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012807">
        <property type="entry name" value="Anti-sigma_ChrR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041916">
        <property type="entry name" value="Anti_sigma_zinc_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025979">
        <property type="entry name" value="ChrR-like_cupin_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12973">
        <property type="entry name" value="Cupin_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02451">
        <property type="entry name" value="anti_sig_ChrR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cupin_7" evidence="1">
        <location>
            <begin position="117"/>
            <end position="197"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12973"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ63930.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="220" mass="23789" checksum="7FCAAF181155E193" modified="2015-12-09" version="1">MRYEMEKHATGMDELLAGYAAGTLTYPAQALIGAHLELSDQNRGYVHSLETLASTGLADSDPVAFTDRNSALAAIFESEDPIRDVTATRSYESDDRVPESLRSIIGPSMESVAWKTLLPGVKECKLGEIDGCDASLIWVRAGRAMPSHTHHGTELTLVLQGGFKDTDGHYVTGDVAFADDDVDHRPIADDGDDCICFAVTAGRLELTGPVGRWFAPFMRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPL4</accession>
    <name>A0A0M6ZPL4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Efflux pump membrane transporter</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">bepG_1</name>
        <name evidence="7" type="ORF">LAX5112_00207</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 4">Cell inner membrane</location>
            <topology evidence="2 4">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 4">Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64182.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670207.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00207"/>
    <dbReference type="EnsemblBacteria" id="CTQ64182">
        <property type="protein sequence ID" value="CTQ64182"/>
        <property type="gene ID" value="LAX5112_00207"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015562">
        <property type="term" value="F:efflux transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042908">
        <property type="term" value="P:xenobiotic transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.2090.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027463">
        <property type="entry name" value="AcrB_DN_DC_subdom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001036">
        <property type="entry name" value="Acrflvin-R"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004764">
        <property type="entry name" value="HAE1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000731">
        <property type="entry name" value="SSD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32063">
        <property type="entry name" value="PTHR32063"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00873">
        <property type="entry name" value="ACR_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00702">
        <property type="entry name" value="ACRIFLAVINRP"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82714">
        <property type="entry name" value="SSF82714"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00915">
        <property type="entry name" value="2A0602"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50156">
        <property type="entry name" value="SSD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="342"/>
            <end position="361"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="368"/>
            <end position="389"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="395"/>
            <end position="415"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="436"/>
            <end position="460"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="472"/>
            <end position="499"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="531"/>
            <end position="553"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="869"/>
            <end position="889"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="896"/>
            <end position="916"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="922"/>
            <end position="947"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="968"/>
            <end position="986"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="998"/>
            <end position="1023"/>
        </location>
    </feature>
    <feature type="domain" description="SSD" evidence="6">
        <location>
            <begin position="333"/>
            <end position="497"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1036"/>
            <end position="1059"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010942"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU364070"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50156"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ64182.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="1059" mass="112405" checksum="0C164E2C6B0DE993" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPT8</accession>
    <name>A0A0M6ZPT8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 4">Beta-lactamase</fullName>
            <ecNumber evidence="2 4">3.5.2.6</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">blaP</name>
        <name evidence="7" type="ORF">LAX5112_00388</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>a beta-lactam + H2O = a substituted beta-amino acid</text>
            <dbReference type="Rhea" id="RHEA:20401"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:35627"/>
            <dbReference type="ChEBI" id="CHEBI:140347"/>
            <dbReference type="EC" id="3.5.2.6"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the class-A beta-lactamase family.</text>
    </comment>
    <dbReference type="EC" id="3.5.2.6" evidence="2 4"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64748.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00388"/>
    <dbReference type="EnsemblBacteria" id="CTQ64748">
        <property type="protein sequence ID" value="CTQ64748"/>
        <property type="gene ID" value="LAX5112_00388"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008800">
        <property type="term" value="F:beta-lactamase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030655">
        <property type="term" value="P:beta-lactam antibiotic catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046677">
        <property type="term" value="P:response to antibiotic"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.710.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012338">
        <property type="entry name" value="Beta-lactam/transpept-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045155">
        <property type="entry name" value="Beta-lactam_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000871">
        <property type="entry name" value="Beta-lactam_class-A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023650">
        <property type="entry name" value="Beta-lactam_class-A_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35333">
        <property type="entry name" value="PTHR35333"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13354">
        <property type="entry name" value="Beta-lactamase2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00118">
        <property type="entry name" value="BLACTAMASEA"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56601">
        <property type="entry name" value="SSF56601"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00146">
        <property type="entry name" value="BETA_LACTAMASE_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0046">Antibiotic resistance</keyword>
    <keyword evidence="4 7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Beta-lactamase2" evidence="6">
        <location>
            <begin position="104"/>
            <end position="308"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="208"/>
            <end position="229"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009009"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012865"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU361140"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF13354"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ64748.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="336" mass="36413" checksum="7784833A29C1F8BC" modified="2015-12-09" version="1">MPNQRNHHLSIPQAAIIFLFTDRHCFRTAAGAPIFDNDWTNLMMFPKALTLGAAALFLTLQGPAYSGGPEFDPAPLATVAKAIESRLNTRIGVAVFDPASGLNWNYNGDDRFPMNSTMKAFACAALLERVDKKQSSLDQRTIITGDMIVSYSPVTENYINTADMTLADHCEATVTISDNTSANIILDELGGPIGVTTYMRSIGDDVTRLDRNEPSLNEGTPGDPRDTTTPVAAAQSLYKVLFSDELSASSRKQLMQWLEANKVGDATLRAGLPHDWRIGDKTGAGAYGSRGNIAIIWPPNHTPVALAVYVTENEAEFQARNKAIAEIGAAFKASFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPX9</accession>
    <name>A0A0M6ZPX9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Acetyltransferase component of pyruvate dehydrogenase complex</fullName>
            <ecNumber evidence="7">2.3.1.12</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">pdhC</name>
        <name evidence="10" type="ORF">LAX5112_00227</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>(R)-N(6)-dihydrolipoyl-L-lysyl-[protein] + acetyl-CoA = (R)-N(6)-(S(8)-acetyldihydrolipoyl)-L-lysyl-[protein] + CoA</text>
            <dbReference type="Rhea" id="RHEA:17017"/>
            <dbReference type="Rhea" id="RHEA-COMP:10475"/>
            <dbReference type="Rhea" id="RHEA-COMP:10478"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57288"/>
            <dbReference type="ChEBI" id="CHEBI:83100"/>
            <dbReference type="ChEBI" id="CHEBI:83111"/>
            <dbReference type="EC" id="2.3.1.12"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="7">
            <name>(R)-lipoate</name>
            <dbReference type="ChEBI" id="CHEBI:83088"/>
        </cofactor>
        <text evidence="7">Binds 1 lipoyl cofactor covalently.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">Forms a 24-polypeptide structural core with octahedral symmetry.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the 2-oxoacid dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.12" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64236.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670223.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00227"/>
    <dbReference type="EnsemblBacteria" id="CTQ64236">
        <property type="protein sequence ID" value="CTQ64236"/>
        <property type="gene ID" value="LAX5112_00227"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043231">
        <property type="term" value="C:intracellular membrane-bounded organelle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045254">
        <property type="term" value="C:pyruvate dehydrogenase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004742">
        <property type="term" value="F:dihydrolipoyllysine-residue acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006086">
        <property type="term" value="P:acetyl-CoA biosynthetic process from pyruvate"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006096">
        <property type="term" value="P:glycolytic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.559.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.320.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003016">
        <property type="entry name" value="2-oxoA_DH_lipoyl-BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001078">
        <property type="entry name" value="2-oxoacid_DH_actylTfrase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000089">
        <property type="entry name" value="Biotin_lipoyl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023213">
        <property type="entry name" value="CAT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045257">
        <property type="entry name" value="E2/Pdx1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036625">
        <property type="entry name" value="E3-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006257">
        <property type="entry name" value="LAT1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004167">
        <property type="entry name" value="PSBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011053">
        <property type="entry name" value="Single_hybrid_motif"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23151">
        <property type="entry name" value="PTHR23151"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00198">
        <property type="entry name" value="2-oxoacid_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00364">
        <property type="entry name" value="Biotin_lipoyl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02817">
        <property type="entry name" value="E3_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47005">
        <property type="entry name" value="SSF47005"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51230">
        <property type="entry name" value="SSF51230"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01349">
        <property type="entry name" value="PDHac_trf_mito"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50968">
        <property type="entry name" value="BIOTINYL_LIPOYL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00189">
        <property type="entry name" value="LIPOYL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51826">
        <property type="entry name" value="PSBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 10" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="5" id="KW-0324">Glycolysis</keyword>
    <keyword evidence="4 7" id="KW-0450">Lipoyl</keyword>
    <keyword evidence="10" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 10" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Lipoyl-binding" evidence="8">
        <location>
            <begin position="2"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="domain" description="Peripheral subunit-binding (PSBD)" evidence="9">
        <location>
            <begin position="137"/>
            <end position="174"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000925"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007317"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011484"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022823"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023152"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00025211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU361137"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51826"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ64236.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="447" mass="45945" checksum="B76E2570BDB52AE0" modified="2015-12-09" version="1">MPINITMPALSPTMEEGNLAKWLVKEGDTVSAGDVIAEIETDKATMEVEAVDEGTVGKIVVEAGTEGVKVNDLIAVLLEDGEDASAIDTSGAVAPAAPAPSPAPAADAGAKEVIPVGAEAATDPIPAPKAADGGRIFASPLARRLAQINGLDLKALSGSGPHGRIVKKDIEAAVAAGTGKAAAAPAAAEAPKAAAAAPAAGPSSDQVLKLFEEGSYELVPHDGMRKTIAKRLTESKQTIPHFYVSVDCELDALLALRSQLNGAASTDKEGKPAYKLSVNDMTIKALALALRDVPDANVSWTDDNMVKHKHADVGVAVSIPGGLITPIIRRAEEKPLSVISNEMKDMGARAKSKKLQPQEYQGGTTAVSNMGMMGVKDFSAVVNPPHATILAVGAGEQRPVVKDGALAIATVMTVTLSTDHRCVDGALGAELLAAFKGYIENPMSMLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQL6</accession>
    <name>A0A0M6ZQL6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase</fullName>
            <ecNumber evidence="5">1.14.13.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ubiF_1</name>
        <name evidence="5" type="ORF">LAX5112_00311</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="2">Cofactor biosynthesis; ubiquinone biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the UbiH/COQ6 family.</text>
    </comment>
    <dbReference type="EC" id="1.14.13.-" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64476.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670286.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00311"/>
    <dbReference type="EnsemblBacteria" id="CTQ64476">
        <property type="protein sequence ID" value="CTQ64476"/>
        <property type="gene ID" value="LAX5112_00311"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00232"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071949">
        <property type="term" value="F:FAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016705">
        <property type="term" value="F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006744">
        <property type="term" value="P:ubiquinone biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002938">
        <property type="entry name" value="FAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010971">
        <property type="entry name" value="UbiH/COQ6"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01494">
        <property type="entry name" value="FAD_binding_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01988">
        <property type="entry name" value="Ubi-OHases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FAD_binding_3" evidence="4">
        <location>
            <begin position="10"/>
            <end position="341"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004749"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005349"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF01494"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ64476.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="402" mass="43279" checksum="7853C735A53BC1C1" modified="2015-12-09" version="1">MARAKKEITCDAVVVGGGPSGRITALALAKTDVKTALVASLDAPQDARTTALWQKSIDLLKDLGIWGDILPTAEPLKTMRMIDGSKRLIRSPETLFESAELGVEEFGYNIINAELNKVLAAACSAEDNITCVDDFAENAAFSEEKAVITTKTGTTVSADLAVAADGRNSLLRTSAGIEVKRWSYPQTALVLNLEHTLPHRGISTEFHTPTGPFTLVPLPGRRSSLVCVETAETADRLKTMDKKLLARDLEDRAHSILGKFTVISEPQTFPLSGMTAHSVVANRLSLIGETAHVFPPVGAQGLNLSMRDIADLISAVAAAQAKGQDIGSLEALKTFEHKRMADIRSRTNAVDMLNRSLLTDFLPVQAARSAGMYLAGKIGPFRRLLMREGMAPGTGFQLRPYL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZR75</accession>
    <name>A0A0M6ZR75_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Putrescine-binding periplasmic protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">potF_1</name>
        <name evidence="8" type="ORF">LAX5112_00382</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Required for the activity of the bacterial periplasmic transport system of putrescine.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 6">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the bacterial solute-binding protein 1 family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the bacterial solute-binding protein PotD/PotF family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64731.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00382"/>
    <dbReference type="EnsemblBacteria" id="CTQ64731">
        <property type="protein sequence ID" value="CTQ64731"/>
        <property type="gene ID" value="LAX5112_00382"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019808">
        <property type="term" value="F:polyamine binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015846">
        <property type="term" value="P:polyamine transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006059">
        <property type="entry name" value="SBP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001188">
        <property type="entry name" value="Sperm_putr-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13416">
        <property type="entry name" value="SBP_bac_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF019574">
        <property type="entry name" value="Periplasmic_polyamine_BP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00909">
        <property type="entry name" value="SPERMDNBNDNG"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0574">Periplasm</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0732">Signal</keyword>
    <keyword evidence="3 6" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="7">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809020" description="Putrescine-binding periplasmic protein" evidence="7">
        <location>
            <begin position="25"/>
            <end position="366"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008520"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRNR" id="PIRNR019574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ64731.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="366" mass="40209" checksum="0AD683A2520F0E78" modified="2015-12-09" version="1">MNMKLKTMLLAVTSLSVLGGAALAQDRTVNVYNWSDYIDESILEDFTKETGINVVYDVFDSNEVLETKLLAGGTGYDVVVPTGTFLSRQIQAGVFDKLDKSKLSNIGNMWSDIEARVAKYDPENAYSINYMWGTTGLGYNVEKVKAALGEDAPVDSWDLLFKPENAAKLEGCGIHVLDAPTELFPAALNYLGLDPDSKDSGDIEKATELLKSVRPYVQKFHSSEYINALANGDICVAVGWSGDVLQARDRAAEADNGVTVEYAIPKEGALMWFDQMAIPADAKNKEEAHEFLNYIMRPDVMAKASNYVYYANGNKASQEMLNDDVIGDPAIYPPAEAVENLYTVTSYPPKVNRVVTRSWTSVKSGQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRR5</accession>
    <name>A0A0M6ZRR5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Putative glutamate synthase subunit beta</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00400</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64780.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670377.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00400"/>
    <dbReference type="EnsemblBacteria" id="CTQ64780">
        <property type="protein sequence ID" value="CTQ64780"/>
        <property type="gene ID" value="LAX5112_00400"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.260">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004792">
        <property type="entry name" value="BaiN-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022460">
        <property type="entry name" value="Flavoprotein_PP4765"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023166">
        <property type="entry name" value="HI0933-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42887">
        <property type="entry name" value="PTHR42887"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03862">
        <property type="entry name" value="flavo_PP4765"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00275">
        <property type="entry name" value="TIGR00275"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ64780.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="408" mass="43711" checksum="2A54421285403BD0" modified="2015-12-09" version="1">MIDALIIGAGPAGLFAAEHLSAKGYDVVVVDRMPSPARKFLMAGRGGLNLTHSEPIETFVSRYREAENFIKPLISDFPPKYLIDWCEGLGQETFVGTSGRVFPKSMKASPLLRAWLRRLDDSGVRLLTRSTFHGFSQDGNVLISRDNEAPSPMPSRAVLLALGGASWPKLGSDAAWVPVLRDAGVEVVDFQPSNCGFEVSWSAFIKQRFAGHPLKRIKVTSGSHSVLGEAILSEKGLEGGAIYALSAEIRSQLNLSGTAPISIDLRPQLTHQTLHEKLGRPRGKQSMSTFLRKTIGLQPLEQALIRESGPLPEAPGDLATRIKTVPVTCTATYDIDRAISSAGGVALAEVDPHLMLRKMPGVFVSGEMLDWEAPTGGYLLQACFASGLAAANGITAHLSSMSPEASGT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRU4</accession>
    <name>A0A0M6ZRU4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Ectoine utilization protein EutC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00445</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ornithine cyclodeaminase/mu-crystallin family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64916.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670405.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00445"/>
    <dbReference type="EnsemblBacteria" id="CTQ64916">
        <property type="protein sequence ID" value="CTQ64916"/>
        <property type="gene ID" value="LAX5112_00445"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1780.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014334">
        <property type="entry name" value="Ectoine_EutC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003462">
        <property type="entry name" value="ODC_Mu_crystall"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023401">
        <property type="entry name" value="ODC_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13812">
        <property type="entry name" value="PTHR13812"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02423">
        <property type="entry name" value="OCD_Mu_crystall"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001439">
        <property type="entry name" value="CryM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02992">
        <property type="entry name" value="ectoine_eutC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008903"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64916.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="330" mass="34578" checksum="85C98B01DF3BADAF" modified="2015-12-09" version="1">MPQITILTETELRKAVPLNIEAVAKIERAFAALASGKVVMPPILSMEIRDFNGEVDAKTAYVPGLDSFALKVSPGFFDNPKIGLPSNSGLMILFSARTGLVEAVMLDNGYLTEVRTAAAGAVAAKHLAPTQASSACIVGAGLQAKLQLQALCLVRPIKHASIWARDMSKAQVAANELASRLEIEVSPVSDLAATVEAADVVVTTTPSTEPLIRAEWLRAGHHITAMGSDQHTKNELEPACLTRADFYVPDRQSQTELMGELRAALAAGAVSAGANFSELGDIVAGQARGRASDADITICDLTGTGVQDTAIATYARAQALSLQAGTTIDT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="31" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSN8</accession>
    <name>A0A0M6ZSN8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Phosphopentomutase</fullName>
            <ecNumber evidence="4">5.4.2.7</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">Phosphodeoxyribomutase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="4 6" type="primary">deoB</name>
        <name evidence="6" type="ORF">LAX5112_00559</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Phosphotransfer between the C1 and C5 carbon atoms of pentose.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>2-deoxy-alpha-D-ribose 1-phosphate = 2-deoxy-D-ribose 5-phosphate</text>
            <dbReference type="Rhea" id="RHEA:27658"/>
            <dbReference type="ChEBI" id="CHEBI:57259"/>
            <dbReference type="ChEBI" id="CHEBI:62877"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>alpha-D-ribose 1-phosphate = D-ribose 5-phosphate</text>
            <dbReference type="Rhea" id="RHEA:18793"/>
            <dbReference type="ChEBI" id="CHEBI:57720"/>
            <dbReference type="ChEBI" id="CHEBI:78346"/>
            <dbReference type="EC" id="5.4.2.7"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="4">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
        <text evidence="4">Binds 1 or 2 manganese ions.</text>
    </comment>
    <comment type="pathway">
        <text evidence="4">Metabolic intermediate biosynthesis; 5-phospho-alpha-D-ribose 1-diphosphate biosynthesis; 5-phospho-alpha-D-ribose 1-diphosphate from D-ribose 5-phosphate (route II): step 1/3.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the phosphopentomutase family.</text>
    </comment>
    <dbReference type="EC" id="5.4.2.7" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65241.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670560.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00559"/>
    <dbReference type="EnsemblBacteria" id="CTQ65241">
        <property type="protein sequence ID" value="CTQ65241"/>
        <property type="gene ID" value="LAX5112_00559"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00087">
        <property type="reaction ID" value="UER00173"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030145">
        <property type="term" value="F:manganese ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008973">
        <property type="term" value="F:phosphopentomutase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006015">
        <property type="term" value="P:5-phosphoribose 1-diphosphate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043094">
        <property type="term" value="P:cellular metabolic compound salvage"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009264">
        <property type="term" value="P:deoxyribonucleotide catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd16009">
        <property type="entry name" value="PPM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1250">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00740">
        <property type="entry name" value="Phosphopentomut"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017850">
        <property type="entry name" value="Alkaline_phosphatase_core_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010045">
        <property type="entry name" value="DeoB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006124">
        <property type="entry name" value="Metalloenzyme"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024052">
        <property type="entry name" value="Phosphopentomutase_DeoB_cap_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21110">
        <property type="entry name" value="PTHR21110"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01676">
        <property type="entry name" value="Metalloenzyme"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001491">
        <property type="entry name" value="Ppentomutase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF143856">
        <property type="entry name" value="SSF143856"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53649">
        <property type="entry name" value="SSF53649"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01696">
        <property type="entry name" value="deoB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 6" id="KW-0413">Isomerase</keyword>
    <keyword evidence="3 4" id="KW-0464">Manganese</keyword>
    <keyword evidence="2 4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Metalloenzyme" evidence="5">
        <location>
            <begin position="3"/>
            <end position="397"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="10"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="310"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="346"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="347"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="358"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010373"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00740"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF01676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ65241.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="406" mass="43574" checksum="6FC7F86C458BC02F" modified="2015-12-09" version="1">MPRAILCVLDSFGIGGAADADAFGDVGSDTLGHIAQHCAAGKGDKYGLRSGPLSVPNMDRLGLGAAGRLSTGEDVPGLTYSGEPEGLWGYAAEVSNGKDTPSGHWEIAGVPVRFDWGYFPETIPTFPKELISKISEKAGLNGILGDKHASGTEVIAELGEEHIKTGKPIFYTSADSVIQIAAHEEHFGLEKLYDLCEITRVFADPYNIGRVIARPFLGDSADTFERTANRRDYSVLPPEPTLLDRLTADRRTVYGIGKISDIFAHQGVAKVLKGAGNDQLFDKTLEAMDLAQDGDMIFANFIDFDSLYGHRRDVPGYAAALEHFDGRLPDMIAKMREGDLLILTADHGCDPTWRGTDHTREHVPVIATGPGIVGKGIGGRKTYADIGESVADHLGIDQGPHGTSFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSZ8</accession>
    <name>A0A0M6ZSZ8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00771</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65828.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00771"/>
    <dbReference type="EnsemblBacteria" id="CTQ65828">
        <property type="protein sequence ID" value="CTQ65828"/>
        <property type="gene ID" value="LAX5112_00771"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025975">
        <property type="entry name" value="Polysacc_lyase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14099">
        <property type="entry name" value="Polysacc_lyase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005808944" evidence="1">
        <location>
            <begin position="38"/>
            <end position="305"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65828.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="305" mass="34268" checksum="6BC757572E12D8A9" modified="2015-12-09" version="1">MGGLRMPSTVFLRFQPVWTCLAGVSVSLFCAAGGAMAAQEEVVIEGVPVAVTEESIKCDIDPADVPKDISVKRLVDCNSAELVEIDLPGESIAAIKFTISPDDKKISSGTRAELRDMHVAKNGDETWYRFSTLLPGDFPMESKHRLVMAQWHERVNEGQESLRPPLSHRLWDGRFVVTLWNGERIKKLGTKKGDGEILHSQPELQREVFHEYAYKVVWSPENDGEIVSWRRQCQPIDLACSNGVWEEFIRYNGPTGYTNKEVNGYYFKIGLYTVREFDVPFTAYHNGYGRGASAADIGLTDPMFQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZT91</accession>
    <name>A0A0M6ZT91_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Gamma-glutamylputrescine synthetase PuuA</fullName>
            <ecNumber evidence="6">6.3.1.11</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">puuA_1</name>
        <name evidence="6" type="ORF">LAX5112_00383</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Catalyzes the ATP-dependent biosynthesis of glutamine from glutamate and ammonia.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the glutamine synthetase family.</text>
    </comment>
    <dbReference type="EC" id="6.3.1.11" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64734.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670361.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00383"/>
    <dbReference type="EnsemblBacteria" id="CTQ64734">
        <property type="protein sequence ID" value="CTQ64734"/>
        <property type="gene ID" value="LAX5112_00383"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004356">
        <property type="term" value="F:glutamate-ammonia ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034024">
        <property type="term" value="F:glutamate-putrescine ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006542">
        <property type="term" value="P:glutamine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009399">
        <property type="term" value="P:nitrogen fixation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036651">
        <property type="entry name" value="Gln_synt_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014746">
        <property type="entry name" value="Gln_synth/guanido_kin_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008146">
        <property type="entry name" value="Gln_synth_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027303">
        <property type="entry name" value="Gln_synth_gly_rich_site"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00120">
        <property type="entry name" value="Gln-synt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01230">
        <property type="entry name" value="Gln-synt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54368">
        <property type="entry name" value="SSF54368"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55931">
        <property type="entry name" value="SSF55931"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00181">
        <property type="entry name" value="GLNA_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0436">Ligase</keyword>
    <keyword evidence="3" id="KW-0535">Nitrogen fixation</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Gln-synt_C" evidence="5">
        <location>
            <begin position="128"/>
            <end position="383"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00003117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023231"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU000384"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM01230"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ64734.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="462" mass="51367" checksum="08024156C7A5E8B5" modified="2015-12-09" version="1">MNELPHQILEHPAEPGWKSAFEAFLEEHPDLDTLEVVLPDTNGVLRGKWLPGKALAKVFEGGVAFPYSLFGLDVWGREVEATGMHLETGDKDGVCWPIPESLKLVPWADRKTAQVLLSMYDRDGEPFLADPRHVLENTVAQMKEEFGVTATCAFELEFYLFEESDGDWTEQPKPLFSTHLGPARQNMYALSDLEALLPVVDDLRRACEAQGIPADAAVSEAAPGQFELNLHHRNNPLLAADDVVLLRRLVAGVARKHELKASFMAKPYVEWPGNGMHVHVSMEDDKGNLFACPEHGSERLGYAINGLLKTMPEALLLFISTFNGFRRMQPGSYAPASICWGFDNRSVALRVPASSPEAARVEHRIAGADANPYLVLTGILAGMTEGLRIKKDPPAAVTGNAYEKRKKRLTPWMDEAIDAFEASKLMKKAVGPEMHKVLTEIKREELNEFGREISSLERQTYL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTG0</accession>
    <name>A0A0M6ZTG0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Putative HTH-type transcriptional regulator YdfH</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ydfH_1</name>
        <name evidence="5" type="ORF">LAX5112_00657</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65506.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00657"/>
    <dbReference type="EnsemblBacteria" id="CTQ65506">
        <property type="protein sequence ID" value="CTQ65506"/>
        <property type="gene ID" value="LAX5112_00657"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07377">
        <property type="entry name" value="WHTH_GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.530">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011711">
        <property type="entry name" value="GntR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008920">
        <property type="entry name" value="TF_FadR/GntR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000524">
        <property type="entry name" value="Tscrpt_reg_HTH_GntR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07729">
        <property type="entry name" value="FCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00392">
        <property type="entry name" value="GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00035">
        <property type="entry name" value="HTHGNTR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00895">
        <property type="entry name" value="FCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00345">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48008">
        <property type="entry name" value="SSF48008"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50949">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH gntR-type" evidence="4">
        <location>
            <begin position="14"/>
            <end position="81"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ65506.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="223" mass="25010" checksum="182304ABDCA90E8A" modified="2015-12-09" version="1">MCKRPMPLQQAAELNLTEHTLERLRKMILCGDLAAGTRLRERTFAERLGVSRTPLREAITRLITEGLVTRNTRGTPTVSRISVSEIVEILHVRRLLECEAARQAASVNSAPEDWLNFKASIEEFVANERPNAVAHADLDFDLHMHIAKTAGSKLLAELIQGLKLKTRIFDQGEIPSRFEPGAREHIEIIDAILARNPDAAEAAMRQHIENAREAILAHIHRLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTH6</accession>
    <name>A0A0M6ZTH6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">HTH-type transcriptional repressor NsrR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">nsrR_1</name>
        <name evidence="1" type="ORF">LAX5112_00412</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64814.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00412"/>
    <dbReference type="EnsemblBacteria" id="CTQ64814">
        <property type="protein sequence ID" value="CTQ64814"/>
        <property type="gene ID" value="LAX5112_00412"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000944">
        <property type="entry name" value="Tscrpt_reg_Rrf2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33221">
        <property type="entry name" value="PTHR33221"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02082">
        <property type="entry name" value="Rrf2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00738">
        <property type="entry name" value="rrf2_super"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51197">
        <property type="entry name" value="HTH_RRF2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ64814.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="154" mass="16972" checksum="8F8F3AB40E381F50" modified="2015-12-09" version="1">MRLTQQTNYAVRALMYCAVNPDKPSRVADIAASFEMSETHLFKIMKVLVDANLIRTIRGRNGGVMLARPAEDISVGEVVRAAEESFLLAECFDSGRKDCPLIMSCGFNGLLHEALEAFMEVLDAKSIADLSEDRFGMRTLLNIESTERPVAANA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTT2</accession>
    <name>A0A0M6ZTT2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00421</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64843.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ64843">
        <property type="protein sequence ID" value="CTQ64843"/>
        <property type="gene ID" value="LAX5112_00421"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ64843.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="53" mass="5909" checksum="A73E7820D4B7CEF1" modified="2015-12-09" version="1">MKELGLGSVIWFTPVCSVPAVISFALVVNSDQVYQNASIIGKTCLFWCKQRFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUD0</accession>
    <name>A0A0M6ZUD0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">3-hydroxy-D-aspartate aldolase</fullName>
            <ecNumber evidence="3">4.1.3.41</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">dhaa</name>
        <name evidence="3" type="ORF">LAX5112_00767</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the DSD1 family.</text>
    </comment>
    <dbReference type="EC" id="4.1.3.41" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65816.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670691.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00767"/>
    <dbReference type="EnsemblBacteria" id="CTQ65816">
        <property type="protein sequence ID" value="CTQ65816"/>
        <property type="gene ID" value="LAX5112_00767"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.37.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001608">
        <property type="entry name" value="Ala_racemase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026956">
        <property type="entry name" value="D-ser_dehydrat-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042208">
        <property type="entry name" value="D-ser_dehydrat-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029066">
        <property type="entry name" value="PLP-binding_barrel"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01168">
        <property type="entry name" value="Ala_racemase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14031">
        <property type="entry name" value="D-ser_dehydrat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01119">
        <property type="entry name" value="D-ser_dehydrat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51419">
        <property type="entry name" value="SSF51419"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0456">Lyase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="D-ser_dehydrat" evidence="2">
        <location>
            <begin position="284"/>
            <end position="370"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005323"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM01119"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ65816.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="387" mass="41512" checksum="19819149C1553F11" modified="2015-12-09" version="1">MNAITGFEKLEVGYDVPAVPGMDEADIQTPCLVLDLDALERNIKKMGDYAKAHGMRHRVHGKMHKSVDVAKLQERLGGAVGVCCQKVSEAEVFARGGIKDVLVSNQVRDPAKIKRLAQLPKLGARTLVCVDDIENVAELSAAAAEAGTTLEVFIEIDCGAGRCGVTTTDAVVEIAKAVDAAPGLKFTGIQAYQGAMQHLDTYEARKEKLDVAIAMVKDAVEGLKAAGLEPELVSGGGTGSYYFESNSGVYNELQCGSYAFMDADYGRILDKDGNRIDQGEWENAFFILTQVMSHAKADKAICDAGLKAQSVDSGLPFIFGRSDVEYVKCSDEHGVIADPDGVLKVGEKLKLVPGHCDPTANVHDWYVGVRNGKVETVWPVSARGKAY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZW02</accession>
    <name>A0A0M6ZW02_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Glutamate--tRNA ligase</fullName>
            <ecNumber evidence="8">6.1.1.17</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">Glutamyl-tRNA synthetase</fullName>
            <shortName evidence="8">GluRS</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="12" type="primary">gltX1</name>
        <name evidence="8" type="synonym">gltX</name>
        <name evidence="12" type="ORF">LAX5112_00951</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 8">
            <text>ATP + L-glutamate + tRNA(Glu) = AMP + diphosphate + L-glutamyl-tRNA(Glu)</text>
            <dbReference type="Rhea" id="RHEA:23540"/>
            <dbReference type="Rhea" id="RHEA-COMP:9663"/>
            <dbReference type="Rhea" id="RHEA-COMP:9680"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78520"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.17"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="8">Monomer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.17" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66392.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670872.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00951"/>
    <dbReference type="EnsemblBacteria" id="CTQ66392">
        <property type="protein sequence ID" value="CTQ66392"/>
        <property type="gene ID" value="LAX5112_00951"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004818">
        <property type="term" value="F:glutamate-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006424">
        <property type="term" value="P:glutamyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00808">
        <property type="entry name" value="GluRS_core"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.350">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00022">
        <property type="entry name" value="Glu_tRNA_synth_type1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045462">
        <property type="entry name" value="aa-tRNA-synth_I_cd-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020751">
        <property type="entry name" value="aa-tRNA-synth_I_codon-bd_sub2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001412">
        <property type="entry name" value="aa-tRNA-synth_I_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008925">
        <property type="entry name" value="aa_tRNA-synth_I_cd-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004527">
        <property type="entry name" value="Glu-tRNA-ligase_bac/mito"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000924">
        <property type="entry name" value="Glu/Gln-tRNA-synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020058">
        <property type="entry name" value="Glu/Gln-tRNA-synth_Ib_cat-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033910">
        <property type="entry name" value="GluRS_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19269">
        <property type="entry name" value="Anticodon_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00749">
        <property type="entry name" value="tRNA-synt_1c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00987">
        <property type="entry name" value="TRNASYNTHGLU"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48163">
        <property type="entry name" value="SSF48163"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00464">
        <property type="entry name" value="gltX_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00178">
        <property type="entry name" value="AA_TRNA_LIGASE_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 8 9" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="5 8 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 8 9" id="KW-0436">Ligase</keyword>
    <keyword evidence="4 8 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6 8 9" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="tRNA-synt_1c" evidence="10">
        <location>
            <begin position="3"/>
            <end position="317"/>
        </location>
    </feature>
    <feature type="domain" description="Anticodon_2" evidence="11">
        <location>
            <begin position="376"/>
            <end position="452"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="'HIGH' region" evidence="8">
        <location>
            <begin position="9"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="'KMSKS' region" evidence="8">
        <location>
            <begin position="250"/>
            <end position="254"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="253"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001818"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007894"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00022"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU363037"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF00749"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF19269"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ66392.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="453" mass="50169" checksum="18C0CBBBE0212BCB" modified="2015-12-09" version="1">MTVTVRFAPSPTGHIHIGNSRPALYNWLYAKKMGGRFILRFDDTDLERSKKEYAESIETDLRWLGISPDVIERQSDRVAAYEAAAEKLKTAGLLYPCYETPDELERRRSRQRALGRPPVYDRAGLKQTEEERAAFEAEGRKPHWRFVLPNHAGDPFETKRTEVTWNDLCRGDQTVDLASMSDPVLIRADGTFLYTLPSIVDDIDMGVTHIIRGEDHVSNTGVQIAIFQALGATAPVFGHHNLLTTRDGEGLSKRKGALSIGSLRDSGVEAMAVSSLAVLTGTSQAVEAVPSMDALVEKFDLTSVSRSSAKFDPEDLKGLNARLVHEMPYADAKDRLDDMGVGGGEAFWNAIRGNCETVNDAKGYWQIVGGPVESRIEDEDREFIAKAKDLLPDGEMTLETWGAWTSALKADTGRKGRGLFMPLRRVLTGLDHGPDMKDMLPLIGRKSILDRLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWZ5</accession>
    <name>A0A0M6ZWZ5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01299</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67265.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67265">
        <property type="protein sequence ID" value="CTQ67265"/>
        <property type="gene ID" value="LAX5112_01299"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67265.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="319" mass="36525" checksum="61A914CB5DAAA564" modified="2015-12-09" version="1">MSADWSARGSRCRTAGGQRRNDGALPSVYDWRTGNRTTGPCPLCRKRSLSAARRACGLRRLGENRTCRQLPWNLSLIWYSGLARYGRLGQDLAGELRLRSAARLGWLRQHPGCLKKLGQYRCGPRQRRLPCWLLTGLRLSGRLPGLWQLLLWRLLTRLRARLLRLGRSLRVCLRRWRSCHGLGRRRLRICRSRLGRDRLTGVLRRRGRCRFRSGAVGRQNNSGLLPGAGNRERDIASDRQGRRYAKIDRFGVRRQPDDTARKIGLHLGTQFGARLQGLGGGSTLCICWQRLCADRFHHDTVSRVSLSTRTLTCRVWLLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZX85</accession>
    <name>A0A0M6ZX85_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Helix-turn-helix</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01087</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66772.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670955.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01087"/>
    <dbReference type="EnsemblBacteria" id="CTQ66772">
        <property type="protein sequence ID" value="CTQ66772"/>
        <property type="gene ID" value="LAX5112_01087"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01381">
        <property type="entry name" value="HTH_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00530">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="1">
        <location>
            <begin position="16"/>
            <end position="51"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66772.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="190" mass="21202" checksum="03371D82431F762E" modified="2015-12-09" version="1">MFDPGTALSRNLGPSLRRWRVLNRVKQQALADELGVSQSKISRWESGTSEPEGLDRSKVERLLLARPDSAADRALVELVSSNSAPVHLVCDLSHRLLAVSPARAQDWHAGVKELMDRPLWPYASDGIRTAEQSLGVKGWFEPHAPDIVFSTERADYPEMTIPESRIRITRLALSDGRFARLVRDDPGRLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="31" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZX90</accession>
    <name>A0A0M6ZX90_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">cusS</name>
        <name evidence="10" type="ORF">LAX5112_01353</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67365.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671234.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01353"/>
    <dbReference type="EnsemblBacteria" id="CTQ67365">
        <property type="protein sequence ID" value="CTQ67365"/>
        <property type="gene ID" value="LAX5112_01353"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5 10" id="KW-0418">Kinase</keyword>
    <keyword evidence="7" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 10" id="KW-0808">Transferase</keyword>
    <keyword evidence="7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="166"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="9">
        <location>
            <begin position="186"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="8">
        <location>
            <begin position="247"/>
            <end position="463"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="458"/>
            <end position="485"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="463"/>
            <end position="477"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ67365.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="485" mass="53825" checksum="F70A711462B9D427" modified="2015-12-09" version="1">MTRLTRFTRTTAFKLSLLYIAVFTLLSGFLLVYISENTDHLMSEQVVQTIDAELKGLSDIYVRGGVRDLVETIDRRSRHPDASLYLLVDFAGNALVGNIARLPTTVLEEADGGIRRVHYTRIGQDSPDTQRQAMVRTFELRGGFRLLVGRDLGEQLRFSHLLGNALRLWLIVVVAMGAITWLFVSRRVMKRIDEITDTSRTIMTGDLTGRLPIAGNDDEFDRLAVSLNTMLDRIELLMRSMKDVTDNIAHDLKTPLTRLQTRVETALRQAEGQNCYKEALEETLSETDHLLRIFNALLRIARIESMAPGEVMERTDINNLINEVSELYEPVVEDEGGILETQVSGGLEAICQKDLVFQGLVNLIENALKYGRPKDGEFRIRISASEHEGRVVLNVSDTGPGIPEKDQDRVKDRFVRLDESRSEPGTGLGLSLVKAVARLHGGELQLTNGNPGLVARIDLTRAKPGSSGSSNGHGGQSDGANPKPE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXI2</accession>
    <name>A0A0M6ZXI2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Porin</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">omp2b_1</name>
        <name evidence="5" type="ORF">LAX5112_01075</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cell outer membrane</location>
            <topology evidence="4">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="domain">
        <text evidence="4">Consists of 16-stranded beta-barrel sheets, with large surface-exposed loops, that form a transmembrane pore at the center of each barrel. The pore is partially ocluded by a peptide loop that folds into the pore lumen.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the alphaproteobacteria porin family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66740.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01075"/>
    <dbReference type="EnsemblBacteria" id="CTQ66740">
        <property type="protein sequence ID" value="CTQ66740"/>
        <property type="gene ID" value="LAX5112_01075"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009279">
        <property type="term" value="C:cell outer membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046930">
        <property type="term" value="C:pore complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015288">
        <property type="term" value="F:porin activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006811">
        <property type="term" value="P:ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003684">
        <property type="entry name" value="Porin_alphabac"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02530">
        <property type="entry name" value="Porin_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0998">Cell outer membrane</keyword>
    <keyword evidence="4" id="KW-0406">Ion transport</keyword>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-0626">Porin</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0732">Signal</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1134">Transmembrane beta strand</keyword>
    <keyword evidence="2 4" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5009360946" description="Porin" evidence="4">
        <location>
            <begin position="23"/>
            <end position="391"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009521"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU364005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ66740.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="391" mass="41770" checksum="C0AD0F504FD10C45" modified="2015-12-09" version="1">MKLFKGMMLGAAAVATATTAQAADLPVAPEPVDYVRICDAYGARFFYIPGTETCLRVGGRVRADYGISDFGNSGPNSWDSKADNSLRFRARGYIRLDARTQTEFGLLRTYTDVWFTSNNSNFGSAGGNTELWDAFVQLGGFTFGRTGSFFDYWTGESWGSRIGQGLDSRANLAAYTATFGNGLSASLSLESNTGERSPSTYIGGYSRGGFRYPALVANVNVVQGWGGAQLMGVVKANRASTAPVDSETAWAIGASARFNLPMLGSNTGLGLRAVYADGAIGYIHEAYGSYDATLNAAGTGLSNSTGWGVAAGITHYWTPTIYTAVQGQYWDIDTLNTANDLSAWSAHATLGWTPVSGLVIGTEFEYKDEDFGAGGVDNQDMTVTFRVQRTF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZ22</accession>
    <name>A0A0M6ZZ22_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01403</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67466.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671203.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67466">
        <property type="protein sequence ID" value="CTQ67466"/>
        <property type="gene ID" value="LAX5112_01403"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809363" evidence="1">
        <location>
            <begin position="20"/>
            <end position="247"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67466.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="247" mass="25864" checksum="501631B95D4CC80B" modified="2015-12-09" version="1">MRPAIALLFWLLAAGGALAQSADPIPGTDVIAERVADPQISGALVAGAVFTGGASVDWKPALHAVLPADWPGGTVCVHARSLDASYERKRYYEVGTDWAGRPAPLGYPTQYPEYTAPGREVPEDAAAHIATAISPGACDREPGGGVPRVLVGDWNTRPEPGRDVRLYINSQGASAAFIYAGTHPGAIACRPVANEHAKTFDHVCPIPAAALTPPVTPLELSLRRGNRYDLGRYLDLVTAVAAVDGGN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZ42</accession>
    <name>A0A0M6ZZ42_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glycosyl hydrolases family 18</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01095</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66794.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670962.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ66794">
        <property type="protein sequence ID" value="CTQ66794"/>
        <property type="gene ID" value="LAX5112_01095"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001223">
        <property type="entry name" value="Glyco_hydro18_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00704">
        <property type="entry name" value="Glyco_hydro_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51910">
        <property type="entry name" value="GH18_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GH18" evidence="1">
        <location>
            <begin position="4"/>
            <end position="266"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51910"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66794.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="266" mass="29199" checksum="2DA9B9005D31A721" modified="2015-12-09" version="1">MPNQKFTAFWLGYVPSGPGAGPVLEDTPSYIDTVILAFANLYPSNTTCTGFLQKSNSQDAIRSGIAGIRKDNPDTKILLSLIGTPNPSVGWNTGITNPDQFGSWCANLADEWDLDGFDVDNEDLDSFPGQPFVDAVIGMRKAMPDKIITLDSYIFDRDKTVIHDLAKYVDYINTIAYFLDFDDMTQLVEQYATVIAPEKISIGVKSDKVGPISQGTSLSETKQLTTWNPSMGPKYGMTLWNLSSDIKQVTGEPDGAWAKVIHDNLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZ49</accession>
    <name>A0A0M6ZZ49_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Phosphoribosyl-AMP cyclohydrolase</fullName>
            <shortName evidence="7">PRA-CH</shortName>
            <ecNumber evidence="7">3.5.4.19</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">hisI</name>
        <name evidence="9" type="ORF">LAX5112_01450</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>1-(5-phospho-beta-D-ribosyl)-5'-AMP + H2O = 1-(5-phospho-beta-D-ribosyl)-5-[(5-phospho-beta-D-ribosylamino)methylideneamino]imidazole-4-carboxamide</text>
            <dbReference type="Rhea" id="RHEA:20049"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:58435"/>
            <dbReference type="ChEBI" id="CHEBI:59457"/>
            <dbReference type="EC" id="3.5.4.19"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="7">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="7">Binds 1 Mg(2+) ion per subunit.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="7">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="7">Binds 1 zinc ion per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2 7">Amino-acid biosynthesis; L-histidine biosynthesis; L-histidine from 5-phospho-alpha-D-ribose 1-diphosphate: step 3/9.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the PRA-CH family.</text>
    </comment>
    <dbReference type="EC" id="3.5.4.19" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67607.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671276.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01450"/>
    <dbReference type="EnsemblBacteria" id="CTQ67607">
        <property type="protein sequence ID" value="CTQ67607"/>
        <property type="gene ID" value="LAX5112_01450"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00031">
        <property type="reaction ID" value="UER00008"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004635">
        <property type="term" value="F:phosphoribosyl-AMP cyclohydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000105">
        <property type="term" value="P:histidine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.810">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01021">
        <property type="entry name" value="HisI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026660">
        <property type="entry name" value="PRA-CH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002496">
        <property type="entry name" value="PRib_AMP_CycHydrolase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038019">
        <property type="entry name" value="PRib_AMP_CycHydrolase_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01502">
        <property type="entry name" value="PRA-CH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141734">
        <property type="entry name" value="SSF141734"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="3 7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 7" id="KW-0368">Histidine biosynthesis</keyword>
    <keyword evidence="5 7 9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-0460">Magnesium</keyword>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="PRA-CH" evidence="8">
        <location>
            <begin position="45"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="92"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="93"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <note>ligand shared between dimeric partners</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="94"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="96"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="111"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <note>ligand shared between dimeric partners</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="118"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <note>ligand shared between dimeric partners</note>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000024"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01021"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF01502"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ67607.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="151" mass="17025" checksum="23891F2545BDBD5D" modified="2015-12-09" version="1">MSDLIISERADKATVEEGDRLMPKFDQDGLIAAVVTDFKTSEVLMVGYMNEEALKRTIETGEAWYWSRSRKGFWKKGETSGQIQKVQEILTDCDQDALVVKVTVEGNGATCHVGYRSCFFRKVVNTSDGTVRLANVEKEKVYDPKEVYGKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZE1</accession>
    <name>A0A0M6ZZE1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">HTH-type transcriptional regulator LeuO</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">leuO</name>
        <name evidence="3" type="ORF">LAX5112_01424</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67542.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671254.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67542">
        <property type="protein sequence ID" value="CTQ67542"/>
        <property type="gene ID" value="LAX5112_01424"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="13"/>
            <end position="70"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ67542.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="316" mass="35383" checksum="3FCE5FD26DD85DD5" modified="2015-12-09" version="1">MKDTFSEIELRKLDLNLLLVFSAVMRERSVSRAADRLYLGASAISMALGRLRDTFEDPLFVRVGSVMEPTARAIAFWQELAPALQNIDQAVRVSKPFDPSTTERIFRFGAPDDLEGLLVPRLIGRLQAEAPQARLVVRHSDFRSLLRVLDDDEADIMLSATPESGIENRHRVDPIYRERFKVLYDAGQLGFSGPLTRERYLATPHALLSLDGALESGLDQKLAESGHKRDVRVAVTHFPTIPHILKSSAMLANVPGTAAAWFARQHALEIHEPPIDFPSFEVALLSHVRVTNDPAVDWFRDLIMEEVRSLALATKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZJ9</accession>
    <name>A0A0M6ZZJ9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Membrane-bound lytic murein transglycosylase F</fullName>
            <ecNumber evidence="9">4.2.2.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">mltF_1</name>
        <name evidence="9" type="ORF">LAX5112_01498</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell outer membrane</location>
            <topology evidence="2">Peripheral membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the virb1 family.</text>
    </comment>
    <dbReference type="EC" id="4.2.2.-" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67731.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67731">
        <property type="protein sequence ID" value="CTQ67731"/>
        <property type="gene ID" value="LAX5112_01498"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009279">
        <property type="term" value="C:cell outer membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023346">
        <property type="entry name" value="Lysozyme-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008258">
        <property type="entry name" value="Transglycosylase_SLT_dom_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01464">
        <property type="entry name" value="SLT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00062">
        <property type="entry name" value="PBPb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53955">
        <property type="entry name" value="SSF53955"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0998">Cell outer membrane</keyword>
    <keyword evidence="6 9" id="KW-0456">Lyase</keyword>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="7">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809155" evidence="7">
        <location>
            <begin position="31"/>
            <end position="490"/>
        </location>
    </feature>
    <feature type="domain" description="PBPb" evidence="8">
        <location>
            <begin position="59"/>
            <end position="300"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004339"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009387"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023237"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="SMART" id="SM00062"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ67731.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="490" mass="55013" checksum="1B622BDD1D38A203" modified="2015-12-09" version="1">MINCFSFRRLGSLIALAMLVLFLVPASPDAMETRLSDELEEILREPFTGDFDAIAERGYLRVLVPFSKTFYFIDNGVQRGTAVDMTAELGKFLEKKHGKKVRSGQLVMMPTPRDALFQDLAEGRGDIAIGNLTITSEREKLINFTTPIFKGVREVPLTTTAGHDLRSPDALSGLEIHVRPSSSYHDSLLALNKKFETDGKAPVKIVAADEKLEDEDLIDLVKAGGIGMIIIDEHKADFWMQIVDGLKIHPDAAVRTDAEIAFAVRPKAPDLLKEMNAFAKTVEKGTLLGNIILKRYLKETKFLKDLNDENRREQFDKLAAVFEKYGQQFDIDWLLIAAQAYQESQFKQTARSNAGAVGVMQIKPTTAAGNPINIKGVEKDADTNVHAGVKYLRYLADQYFSDLKDDPANQTFFALAAYNAGPSRFKKLRAEAEKQGYDPNLWFGNVEWIVGKHISREPVRYVGNIYKYYVVFAQEQKRYQNSPEAQKKGD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0G4</accession>
    <name>A0A0M7A0G4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative N-acetyltransferase YjcF</fullName>
            <ecNumber evidence="2">2.3.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yjcF</name>
        <name evidence="2" type="ORF">LAX5112_01620</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.3.1.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68061.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671459.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01620"/>
    <dbReference type="EnsemblBacteria" id="CTQ68061">
        <property type="protein sequence ID" value="CTQ68061"/>
        <property type="gene ID" value="LAX5112_01620"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13673">
        <property type="entry name" value="Acetyltransf_10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="10"/>
            <end position="151"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68061.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="151" mass="16682" checksum="C5F85D0656D4196C" modified="2015-12-09" version="1">MKNKLNGAWNTFDALSPRDVHDLLKLRQDVFMLEQDCLFPEIDGNDPDTEHYLLRDAETGALAGAIRLSSSDDGAVRIGRVVVAQSHRGLGLGRDLMLAGMEKARQIAPSGQVHLSAQAHLEKFYASLGFRTVSEVYLEDDIPHIDMIASH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A180</accession>
    <name>A0A0M7A180_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Protein translocase subunit SecE</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7 8" type="primary">secE</name>
        <name evidence="8" type="ORF">LAX5112_01711</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Component of the Sec protein translocase complex. Heterotrimer consisting of SecY, SecE and SecG subunits. The heterotrimers can form oligomers, although 1 heterotrimer is thought to be able to translocate proteins. Interacts with the ribosome. Interacts with SecDF, and other proteins may be involved. Interacts with SecA.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cell membrane</location>
            <topology evidence="7">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the SecE/SEC61-gamma family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68361.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040450750.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01711"/>
    <dbReference type="EnsemblBacteria" id="CTQ68361">
        <property type="protein sequence ID" value="CTQ68361"/>
        <property type="gene ID" value="LAX5112_01711"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008320">
        <property type="term" value="F:protein transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0065002">
        <property type="term" value="P:intracellular protein transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009306">
        <property type="term" value="P:protein secretion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006605">
        <property type="term" value="P:protein targeting"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043952">
        <property type="term" value="P:protein transport by the Sec complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.1030">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00422">
        <property type="entry name" value="SecE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005807">
        <property type="entry name" value="SecE_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038379">
        <property type="entry name" value="SecE_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001901">
        <property type="entry name" value="Translocase_SecE/Sec61-g"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33910">
        <property type="entry name" value="PTHR33910"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00584">
        <property type="entry name" value="SecE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00964">
        <property type="entry name" value="secE_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="3 7" id="KW-0653">Protein transport</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 7" id="KW-0811">Translocation</keyword>
    <keyword evidence="2 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="1 7" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="29"/>
            <end position="49"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023010"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00422"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ68361.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="65" mass="7202" checksum="3DE54BBBCA910747" modified="2015-12-09" version="1">MAKTNPFKFIQEVRSETSKVTWPTRKETAVTTVMVFIMVMIASIFFLVADQLMSLGIGYILGVGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1S8</accession>
    <name>A0A0M7A1S8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Molybdopterin molybdenumtransferase</fullName>
            <ecNumber evidence="7">2.10.1.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">moeA_2</name>
        <name evidence="9" type="ORF">LAX5112_01948</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2 7">Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>adenylyl-molybdopterin + H(+) + molybdate = AMP + H2O + Mo-molybdopterin</text>
            <dbReference type="Rhea" id="RHEA:35047"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:36264"/>
            <dbReference type="ChEBI" id="CHEBI:62727"/>
            <dbReference type="ChEBI" id="CHEBI:71302"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="2.10.1.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="7">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="3 7">Cofactor biosynthesis; molybdopterin biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4 7">Belongs to the MoeA family.</text>
    </comment>
    <dbReference type="EC" id="2.10.1.1" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68955.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671634.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01948"/>
    <dbReference type="EnsemblBacteria" id="CTQ68955">
        <property type="protein sequence ID" value="CTQ68955"/>
        <property type="gene ID" value="LAX5112_01948"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00344"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061599">
        <property type="term" value="F:molybdopterin molybdotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006777">
        <property type="term" value="P:Mo-molybdopterin cofactor biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032324">
        <property type="term" value="P:molybdopterin cofactor biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00887">
        <property type="entry name" value="MoeA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.340.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.980.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036425">
        <property type="entry name" value="MoaB/Mog-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001453">
        <property type="entry name" value="MoaB/Mog_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008284">
        <property type="entry name" value="MoCF_biosynth_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038987">
        <property type="entry name" value="MoeA-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005111">
        <property type="entry name" value="MoeA_C_domain_IV"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036688">
        <property type="entry name" value="MoeA_C_domain_IV_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005110">
        <property type="entry name" value="MoeA_linker/N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036135">
        <property type="entry name" value="MoeA_linker/N_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10192">
        <property type="entry name" value="PTHR10192"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00994">
        <property type="entry name" value="MoCF_biosynth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03454">
        <property type="entry name" value="MoeA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03453">
        <property type="entry name" value="MoeA_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00852">
        <property type="entry name" value="MoCF_biosynth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53218">
        <property type="entry name" value="SSF53218"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63867">
        <property type="entry name" value="SSF63867"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63882">
        <property type="entry name" value="SSF63882"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00177">
        <property type="entry name" value="molyb_syn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01079">
        <property type="entry name" value="MOCF_BIOSYNTHESIS_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0460">Magnesium</keyword>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5 7" id="KW-0500">Molybdenum</keyword>
    <keyword evidence="6 7" id="KW-0501">Molybdenum cofactor biosynthesis</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 9" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="MoCF_biosynth" evidence="8">
        <location>
            <begin position="196"/>
            <end position="333"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001529"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00002901"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005046"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00010763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022505"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023150"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU365090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="SMART" id="SM00852"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ68955.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="425" mass="45836" checksum="29BA50BA1D569C58" modified="2015-12-09" version="1">MTAKPLLNDCFLHDKDRLKHAEALAILKDRLAPVALSQTIPLGEALGRILAEDITAPRNIPLADNSAVDGYAFRFADHDEAGGFFRLRQRVAAGHASNEMLAPWGAARIFTGAVMPPGADTVAMQEDCETHSQDGEDFVIVPQGLKKGANCRKAGEDVAESTKILTSGHRLKPQDLAAIASTGLAEITVYRKLKVALVSTGDELRRPGDLITVGDVYDSNHYLLKSLAAGLPVEIEDLGILKDDAGLVERTLAEASKTFDIILTTGGASRGEEDHMQTALEKLGQRHMWQLAIKPGRPMMFGQIGNCVFLGLPGNPVAAMVCFLLYGRPVLSVLGGGGFVEPQRFQAPADFEVPKKKPDRREFYRGILGIDENGKTIARKFDRDGSGLITGLREADGLIEIPEDATSVKRGELVTFLPFSGMGVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1X3</accession>
    <name>A0A0M7A1X3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative domain 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01803</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the thioesterase PaaI family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68601.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671525.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01803"/>
    <dbReference type="EnsemblBacteria" id="CTQ68601">
        <property type="protein sequence ID" value="CTQ68601"/>
        <property type="gene ID" value="LAX5112_01803"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047617">
        <property type="term" value="F:acyl-CoA hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039298">
        <property type="entry name" value="ACOT13"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029069">
        <property type="entry name" value="HotDog_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003736">
        <property type="entry name" value="PAAI_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006683">
        <property type="entry name" value="Thioestr_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21660">
        <property type="entry name" value="PTHR21660"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03061">
        <property type="entry name" value="4HBT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54637">
        <property type="entry name" value="SSF54637"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00369">
        <property type="entry name" value="unchar_dom_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="4HBT" evidence="2">
        <location>
            <begin position="53"/>
            <end position="122"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008324"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF03061"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ68601.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="147" mass="15900" checksum="4570319FD8AE9296" modified="2015-12-09" version="1">MELKPRSADWEQRVRKSFEAQAFMEHLGARMVHLEPGAVDLELSMRPELTQQHGFFHAGATSSIADSAAGYAALTLFADGTGVLTTEYKINLLNPAAQPTLVARGRVLKPGRTLTIARADVYGLSDDTQVHVATGLFTLMSVAGMKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A267</accession>
    <name>A0A0M7A267_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative endoribonuclease L-PSP</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01847</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68691.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671555.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01847"/>
    <dbReference type="EnsemblBacteria" id="CTQ68691">
        <property type="protein sequence ID" value="CTQ68691"/>
        <property type="gene ID" value="LAX5112_01847"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd02199">
        <property type="entry name" value="YjgF_YER057c_UK114_like_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013813">
        <property type="entry name" value="Endoribo_LPSP/chorism_mut-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035959">
        <property type="entry name" value="RutC-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14588">
        <property type="entry name" value="YjgF_endoribonc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55298">
        <property type="entry name" value="SSF55298"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="YjgF_endoribonc" evidence="1">
        <location>
            <begin position="6"/>
            <end position="149"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF14588"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68691.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="155" mass="15874" checksum="B1B39243102AD9C5" modified="2015-12-09" version="1">MTSKTEARLAELGITLPDAAAPAANYVPFVKTGNQLFISGQLPMDSGAIAVTGKLGDGLEVVDGQKAAKLCAINLLAQAKAATGDLDKVVRLVKIVGFVNSTGDFTDQPKVINGASDFLVEAMGDSGRHARSAVSAASLPFGAAVEIEAIFEIAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2C2</accession>
    <name>A0A0M7A2C2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Quaternary ammonium compound-resistance protein SugE</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">sugE</name>
        <name evidence="6" type="ORF">LAX5112_01811</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cell membrane</location>
            <topology evidence="4">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the drug/metabolite transporter (DMT) superfamily. Small multidrug resistance (SMR) (TC 2.A.7.1) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68622.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671667.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ68622">
        <property type="protein sequence ID" value="CTQ68622"/>
        <property type="gene ID" value="LAX5112_01811"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042221">
        <property type="term" value="P:response to chemical"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000390">
        <property type="entry name" value="Small_drug/metabolite_transptr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045324">
        <property type="entry name" value="Small_multidrug_res"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30561">
        <property type="entry name" value="PTHR30561"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00893">
        <property type="entry name" value="Multi_Drug_Res"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="3 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="29"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="60"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="85"/>
            <end position="102"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003942"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ68622.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="103" mass="11019" checksum="833F181BBB4FF435" modified="2015-12-09" version="1">MAWVLLFLAGLLEIIWAYAMKQSHGFSRFLPTFVMAVAMIGSFGLLAVSMRSLPLGTAYMIWTGIGAIGAFAVGVWVLGEAITPQRLIAALLIVAGMVTMKLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="31" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2S0</accession>
    <name>A0A0M7A2S0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">DNA topoisomerase 1</fullName>
            <ecNumber evidence="10">5.6.2.1</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10">DNA topoisomerase I</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="10 13" type="primary">topA</name>
        <name evidence="13" type="ORF">LAX5112_01861</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 10">
            <text>ATP-independent breakage of single-stranded DNA, followed by passage and rejoining.</text>
            <dbReference type="EC" id="5.6.2.1"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="10">Monomer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 10">Belongs to the type IA topoisomerase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="5.6.2.1" evidence="10"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68716.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671564.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01861"/>
    <dbReference type="EnsemblBacteria" id="CTQ68716">
        <property type="protein sequence ID" value="CTQ68716"/>
        <property type="gene ID" value="LAX5112_01861"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005694">
        <property type="term" value="C:chromosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003917">
        <property type="term" value="F:DNA topoisomerase type I (single strand cut, ATP-independent) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
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    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="651" mass="69314" checksum="1D6F930F625EDA35" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3M1</accession>
    <name>A0A0M7A3M1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA</fullName>
            <ecNumber evidence="3">3.1.4.17</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">cpdA_2</name>
        <name evidence="3" type="ORF">LAX5112_02207</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the cyclic nucleotide phosphodiesterase class-III family.</text>
    </comment>
    <dbReference type="EC" id="3.1.4.17" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69675.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671845.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02207"/>
    <dbReference type="EnsemblBacteria" id="CTQ69675">
        <property type="protein sequence ID" value="CTQ69675"/>
        <property type="gene ID" value="LAX5112_02207"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004115">
        <property type="term" value="F:3',5'-cyclic-AMP phosphodiesterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd07402">
        <property type="entry name" value="MPP_GpdQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.750.180">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.21.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004843">
        <property type="entry name" value="Calcineurin-like_PHP_ApaH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026575">
        <property type="entry name" value="GpdQ/CpdA-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042281">
        <property type="entry name" value="GpdQ_beta-strand"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042283">
        <property type="entry name" value="GpdQ_catalytic"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029052">
        <property type="entry name" value="Metallo-depent_PP-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00149">
        <property type="entry name" value="Metallophos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56300">
        <property type="entry name" value="SSF56300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Metallophos" evidence="2">
        <location>
            <begin position="3"/>
            <end position="200"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00025742"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00149"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ69675.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="267" mass="28811" checksum="E432269020C7A3CD" modified="2015-12-09" version="1">MTKIIQISDTHIVPEGTLAYGQVDTAKALAETVATINRLLPQIGPVDLVIVTGDLTERGSEEEYGRFKALMADLDLPYRVLPGNHDRREPMRRSFADAHWMPRTGPLDWQIDLEDFAVIGLDSLTANAAHGTLEPATLSFLTDALAHLSGKPVLAGFHHPPFAVGIEAMDAQNLRNASSLGTALSRHTGQVLMVCGHLHRSIAGLFSGRLCQVCPGTSHAVTLDQRSNAGNSLTKEPGGLLLHEWRDGGFLSHLVPIGTYPGGYPFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4F4</accession>
    <name>A0A0M7A4F4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Nicotinamidase/pyrazinamidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02126</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69471.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671784.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02126"/>
    <dbReference type="EnsemblBacteria" id="CTQ69471">
        <property type="protein sequence ID" value="CTQ69471"/>
        <property type="gene ID" value="LAX5112_02126"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.850">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000868">
        <property type="entry name" value="Isochorismatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036380">
        <property type="entry name" value="Isochorismatase-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00857">
        <property type="entry name" value="Isochorismatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52499">
        <property type="entry name" value="SSF52499"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Isochorismatase" evidence="1">
        <location>
            <begin position="13"/>
            <end position="162"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69471.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="216" mass="23999" checksum="2F0130C5E981FF0A" modified="2015-12-09" version="1">MSKHEMISPENAALVLIDFQPAMYQGVESHDRLSVMHNVQILAKGAKLFNLPTVISTVAKDSFSGPFMPEVTDLFPEVEVVDRTSINSWVDENFRRAVAATGRKKIVLAGLWTEACVMFPTLDLLREGYEVYIPADACGDITPEAHERAMDRLVQAGAVPMNALQFIFELQQDWARGETYDGVMDILKTHTPYGIQVRFSKWALGEHASEAGIAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4J7</accession>
    <name>A0A0M7A4J7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Alcohol dehydrogenase [acceptor]</fullName>
            <ecNumber evidence="6">1.1.99.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">alkJ_1</name>
        <name evidence="6" type="ORF">LAX5112_02016</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the GMC oxidoreductase family.</text>
    </comment>
    <dbReference type="EC" id="1.1.99.-" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69190.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671711.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02016"/>
    <dbReference type="EnsemblBacteria" id="CTQ69190">
        <property type="protein sequence ID" value="CTQ69190"/>
        <property type="gene ID" value="LAX5112_02016"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016614">
        <property type="term" value="F:oxidoreductase activity, acting on CH-OH group of donors"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012132">
        <property type="entry name" value="GMC_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000172">
        <property type="entry name" value="GMC_OxRdtase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007867">
        <property type="entry name" value="GMC_OxRtase_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11552">
        <property type="entry name" value="PTHR11552"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05199">
        <property type="entry name" value="GMC_oxred_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00732">
        <property type="entry name" value="GMC_oxred_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000137">
        <property type="entry name" value="Alcohol_oxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00623">
        <property type="entry name" value="GMC_OXRED_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00624">
        <property type="entry name" value="GMC_OXRED_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3" id="KW-0274">FAD</keyword>
    <keyword evidence="3" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GMC_OxRdtase_N" evidence="4">
        <location>
            <begin position="84"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="domain" description="GMC_OxRdtase_N" evidence="5">
        <location>
            <begin position="256"/>
            <end position="270"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="86"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="221"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010790"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR000137-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU003968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS00623"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS00624"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ69190.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="536" mass="58898" checksum="BF878C13514EB849" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A521</accession>
    <name>A0A0M7A521_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Inorganic pyrophosphatase</fullName>
            <ecNumber evidence="5">3.6.1.1</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Pyrophosphate phospho-hydrolase</fullName>
            <shortName evidence="5">PPase</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5 6" type="primary">ppa</name>
        <name evidence="6" type="ORF">LAX5112_02222</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>diphosphate + H2O = H(+) + 2 phosphate</text>
            <dbReference type="Rhea" id="RHEA:24576"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="EC" id="3.6.1.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 5">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="5">Homohexamer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the PPase family.</text>
    </comment>
    <dbReference type="EC" id="3.6.1.1" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69717.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008193008.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02222"/>
    <dbReference type="EnsemblBacteria" id="CTQ69717">
        <property type="protein sequence ID" value="CTQ69717"/>
        <property type="gene ID" value="LAX5112_02222"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004427">
        <property type="term" value="F:inorganic diphosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006796">
        <property type="term" value="P:phosphate-containing compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00412">
        <property type="entry name" value="pyrophosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.80.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00209">
        <property type="entry name" value="Inorganic_PPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008162">
        <property type="entry name" value="Pyrophosphatase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036649">
        <property type="entry name" value="Pyrophosphatase_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10286">
        <property type="entry name" value="PTHR10286"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00719">
        <property type="entry name" value="Pyrophosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50324">
        <property type="entry name" value="SSF50324"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 5 6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4 5" id="KW-0460">Magnesium</keyword>
    <keyword evidence="2 5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="binding site" evidence="5">
        <location>
            <position position="30"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="44"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="56"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="66"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="71"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="103"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="142"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00209"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ69717.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="179" mass="19911" checksum="A236B50304DE4D92" modified="2015-12-09" version="1">MRIDAVPIGKNPPEEINVIVEVPVGGEPIKYEMDKEAGAMYVDRFLYTPMRYPGNYGFVPHTLCGDGDPIDVVVVNQRPVVPGAIMTCRPIGVLLMEDESGQDEKIIAVPSHKITKRYDGVSDITDMPQITIDQVKHFFEHYKDLEPGKWVKVTGIEGAEAAKRMIVESIERAKTEAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A549</accession>
    <name>A0A0M7A549_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Ribosomal-protein-alanine acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02223</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69721.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451087.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02223"/>
    <dbReference type="EnsemblBacteria" id="CTQ69721">
        <property type="protein sequence ID" value="CTQ69721"/>
        <property type="gene ID" value="LAX5112_02223"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="6"/>
            <end position="165"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69721.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="172" mass="19344" checksum="30CD5D0E31E9B5EF" modified="2015-12-09" version="1">MTLDLIDLRAARPADCEALASIHSEAWLGAYRGVLHGLDLQRMVSRRGENWWRGALARGVNIKILSVADVPAGYATFGPCRLTNTSMDGEIYELYLKPEYQGLGFGRRLFEDIRASFLERHGSGLAVQVLSDNTPAREFYRALGGQVAGKSWHRIGGRRLELLIYIWPRRTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A553</accession>
    <name>A0A0M7A553_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">RNA polymerase sigma-32 factor</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">rpoH_1</name>
        <name evidence="6" type="ORF">LAX5112_02166</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69566.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671815.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02166"/>
    <dbReference type="EnsemblBacteria" id="CTQ69566">
        <property type="protein sequence ID" value="CTQ69566"/>
        <property type="gene ID" value="LAX5112_02166"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016987">
        <property type="term" value="F:sigma factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006352">
        <property type="term" value="P:DNA-templated transcription, initiation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014284">
        <property type="entry name" value="RNA_pol_sigma-70_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000943">
        <property type="entry name" value="RNA_pol_sigma70"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007627">
        <property type="entry name" value="RNA_pol_sigma70_r2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007630">
        <property type="entry name" value="RNA_pol_sigma70_r4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013325">
        <property type="entry name" value="RNA_pol_sigma_r2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013324">
        <property type="entry name" value="RNA_pol_sigma_r3/r4-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04542">
        <property type="entry name" value="Sigma70_r2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04545">
        <property type="entry name" value="Sigma70_r4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000770">
        <property type="entry name" value="RNA_pol_sigma-SigE/K"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00046">
        <property type="entry name" value="SIGMA70FCT"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88659">
        <property type="entry name" value="SSF88659"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88946">
        <property type="entry name" value="SSF88946"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02937">
        <property type="entry name" value="sigma70-ECF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00715">
        <property type="entry name" value="SIGMA70_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0731">Sigma factor</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="RNA_pol_sigma70" evidence="5">
        <location>
            <begin position="69"/>
            <end position="82"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023082"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS00715"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ69566.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="291" mass="32761" checksum="7559CBEAE18A1D98" modified="2015-12-09" version="1">MSTSMSERRHLVKTAMKAPYLTREEELELAIQWRDNKDEKALEKLSLSHMRLVIAVASRFKNFGLNIGDLIQEGHVGLLEAAARFEPEREVRFSTYATWWIRASIQDYILRNWSIVRGGTSSSQKALFFNLRRLRAKLSSNQTPLTDSELHQKIADAIGVKQSDVAVMNARLSGPDTSLNAPVTDTEGSSADRQDFLVSDAPQPDEIVTENIDAERRNTWLASALDVLSERELKIVRERRLSEDGATLESLGKKLGISKERVRQIESRALQKLKSALLANQPDKSVYAISI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5K7</accession>
    <name>A0A0M7A5K7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01970</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ69013.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ69013">
        <property type="protein sequence ID" value="CTQ69013"/>
        <property type="gene ID" value="LAX5112_01970"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="21"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="25"/>
            <end position="42"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69013.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="42" mass="4697" checksum="63FF9C518C34CE41" modified="2015-12-09" version="1">MAQYGGKRTSHIRQMCVALKPLKRTDAETSGETLKSDTEDQD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5U7</accession>
    <name>A0A0M7A5U7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Nitrogen regulatory protein P-II</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">glnK</name>
        <name evidence="8" type="ORF">LAX5112_02248</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">In nitrogen-limiting conditions, when the ratio of Gln to 2-ketoglutarate decreases, P-II is uridylylated to P-II-UMP. P-II-UMP allows the deadenylation of glutamine synthetase (GS), thus activating the enzyme. Conversely, in nitrogen excess P-II is deuridylated and promotes the adenylation of GS. P-II indirectly controls the transcription of the GS gene (glnA). P-II prevents NR-II-catalyzed conversion of NR-I to NR-I-phosphate, the transcriptional activator of glnA. When P-II is uridylylated to P-II-UMP, these events are reversed.</text>
    </comment>
    <comment type="subunit">
        <text evidence="1">Homotrimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the P(II) protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69786.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040452614.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02248"/>
    <dbReference type="EnsemblBacteria" id="CTQ69786">
        <property type="protein sequence ID" value="CTQ69786"/>
        <property type="gene ID" value="LAX5112_02248"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030234">
        <property type="term" value="F:enzyme regulator activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006808">
        <property type="term" value="P:regulation of nitrogen utilization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002187">
        <property type="entry name" value="N-reg_PII"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011322">
        <property type="entry name" value="N-reg_PII-like_a/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015867">
        <property type="entry name" value="N-reg_PII/ATP_PRibTrfase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017918">
        <property type="entry name" value="N-reg_PII_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30115">
        <property type="entry name" value="PTHR30115"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00543">
        <property type="entry name" value="P-II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF039144">
        <property type="entry name" value="GlnB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00340">
        <property type="entry name" value="PIIGLNB"/>
    </dbReference>
    <dbReference type="SMART" id="SM00938">
        <property type="entry name" value="P-II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54913">
        <property type="entry name" value="SSF54913"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00638">
        <property type="entry name" value="PII_GLNB_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51343">
        <property type="entry name" value="PII_GLNB_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 6" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="modified residue" description="O-UMP-tyrosine" evidence="5">
        <location>
            <position position="51"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00011233"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00015681"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00025238"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR039144-50"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR602187-50"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ69786.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="112" mass="12069" checksum="74088FEA114A7CFC" modified="2015-12-09" version="1">MKIVMAIIKPFKLDEVRDALTGIGIQGLTVTEVKGYGRQKGHTEIYRGTEYAVSFLPKLKIEVAVDGGSVDKVVEVISGAAKTGQIGDGKIFVYSIDQVVRIRTGETDAEAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7A2</accession>
    <name>A0A0M7A7A2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Carbon monoxide dehydrogenase large chain</fullName>
            <ecNumber evidence="2">1.2.99.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">cutL_1</name>
        <name evidence="2" type="ORF">LAX5112_02698</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.2.99.2" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71045.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672255.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02698"/>
    <dbReference type="EnsemblBacteria" id="CTQ71045">
        <property type="protein sequence ID" value="CTQ71045"/>
        <property type="gene ID" value="LAX5112_02698"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000674">
        <property type="entry name" value="Ald_Oxase/Xan_DH_a/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036856">
        <property type="entry name" value="Ald_Oxase/Xan_DH_a/b_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016208">
        <property type="entry name" value="Ald_Oxase/xanthine_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008274">
        <property type="entry name" value="AldOxase/xan_DH_Mopterin-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037165">
        <property type="entry name" value="AldOxase/xan_DH_Mopterin-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11908">
        <property type="entry name" value="PTHR11908"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01315">
        <property type="entry name" value="Ald_Xan_dh_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02738">
        <property type="entry name" value="Ald_Xan_dh_C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01008">
        <property type="entry name" value="Ald_Xan_dh_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54665">
        <property type="entry name" value="SSF54665"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56003">
        <property type="entry name" value="SSF56003"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ald_Xan_dh_C" evidence="1">
        <location>
            <begin position="25"/>
            <end position="142"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM01008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71045.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="765" mass="81655" checksum="3AAA754C659E5770" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7F7</accession>
    <name>A0A0M7A7F7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Tautomerase</fullName>
            <ecNumber evidence="3">5.3.2.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">LAX5112_02391</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the 4-oxalocrotonate tautomerase family.</text>
    </comment>
    <dbReference type="EC" id="5.3.2.-" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70170.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672008.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02391"/>
    <dbReference type="EnsemblBacteria" id="CTQ70170">
        <property type="protein sequence ID" value="CTQ70170"/>
        <property type="gene ID" value="LAX5112_02391"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006725">
        <property type="term" value="P:cellular aromatic compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.429.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004370">
        <property type="entry name" value="4-oxalocrotonate_tautomerase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014347">
        <property type="entry name" value="Tautomerase/MIF_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018191">
        <property type="entry name" value="Tautomerase_Pseudo-typ"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01361">
        <property type="entry name" value="Tautomerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55331">
        <property type="entry name" value="SSF55331"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00013">
        <property type="entry name" value="taut"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0413">Isomerase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tautomerase" evidence="4">
        <location>
            <begin position="2"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor; via imino nitrogen" evidence="2">
        <location>
            <position position="2"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR618191-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU362032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF01361"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ70170.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="70" mass="7816" checksum="8667712EE4F093C5" modified="2015-12-09" version="1">MPYVHIQVTDEGVSEHQKAELIKGATDLLVDVLNKEPATTFVVIEEVPLENWGIAGLPVSEFRARKKTRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7G1</accession>
    <name>A0A0M7A7G1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Cell wall polymerase</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Peptidoglycan polymerase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9" type="primary">ftsW</name>
        <name evidence="9" type="ORF">LAX5112_02614</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70799.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040450858.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02614"/>
    <dbReference type="EnsemblBacteria" id="CTQ70799">
        <property type="protein sequence ID" value="CTQ70799"/>
        <property type="gene ID" value="LAX5112_02614"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008955">
        <property type="term" value="F:peptidoglycan glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008360">
        <property type="term" value="P:regulation of cell shape"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001182">
        <property type="entry name" value="FtsW/RodA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30474">
        <property type="entry name" value="PTHR30474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01098">
        <property type="entry name" value="FTSW_RODA_SPOVE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="9" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="9" id="KW-0132">Cell division</keyword>
    <keyword evidence="3" id="KW-0133">Cell shape</keyword>
    <keyword evidence="5 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="20"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="59"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="83"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="146"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="177"/>
            <end position="210"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="265"/>
            <end position="291"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="303"/>
            <end position="320"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="340"/>
            <end position="361"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00032370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00033270"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ70799.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="385" mass="41708" checksum="C7D55DB686F6DF83" modified="2015-12-09" version="1">MVSRADRSRFAEWLWTVDHYLLAAFSILLVSGVVFAFAASPPVAERIGVDTFYFVKRQAMFTIPALGIMLAASLMTPRMVRRAALVLFTISVVLLIATLFMGFETKGARRWIYIAGVSVQASEYLKPAFVVLIAFLLSESGRRREVPGVLFAFILFAVCATLLVAQPDFGQTMLIGMVWAALFFLNGISWMIIVALGIIGIAGLFAAYAFLPHVTSRVDRFLDPSTGDTFQVDTALEAFMSGGWFGRGPGEGTVKRILPDSHADFIFAVVGEEFGVIACLMLVIVFAFIVIRGLQHASRDQDAFGRLATAGLVVLFGLQATINLSVNLHLVPSKGMTLPFISYGGSSLLASAMSAGAILALTRKRPRPMSNDTVTVSRLSPSSLM</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7R6</accession>
    <name>A0A0M7A7R6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Protein-tyrosine-phosphatase</fullName>
            <ecNumber evidence="3">3.1.3.48</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">yfkJ</name>
        <name evidence="7" type="ORF">LAX5112_02243</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>H2O + O-phospho-L-tyrosyl-[protein] = L-tyrosyl-[protein] + phosphate</text>
            <dbReference type="Rhea" id="RHEA:10684"/>
            <dbReference type="Rhea" id="RHEA-COMP:10136"/>
            <dbReference type="Rhea" id="RHEA-COMP:10137"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:46858"/>
            <dbReference type="ChEBI" id="CHEBI:82620"/>
            <dbReference type="EC" id="3.1.3.48"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the low molecular weight phosphotyrosine protein phosphatase family.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.48" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69773.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671871.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02243"/>
    <dbReference type="EnsemblBacteria" id="CTQ69773">
        <property type="protein sequence ID" value="CTQ69773"/>
        <property type="gene ID" value="LAX5112_02243"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004725">
        <property type="term" value="F:protein tyrosine phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006470">
        <property type="term" value="P:protein dephosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023485">
        <property type="entry name" value="Ptyr_pPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036196">
        <property type="entry name" value="Ptyr_pPase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017867">
        <property type="entry name" value="Tyr_phospatase_low_mol_wt"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01451">
        <property type="entry name" value="LMWPc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00719">
        <property type="entry name" value="LMWPTPASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM00226">
        <property type="entry name" value="LMWPc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52788">
        <property type="entry name" value="SSF52788"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-0904">Protein phosphatase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="LMWPc" evidence="6">
        <location>
            <begin position="2"/>
            <end position="146"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011063"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00013064"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022912"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM00226"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ69773.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="153" mass="16687" checksum="65796EDF888CDBCD" modified="2015-12-09" version="1">MTSVLFVCLGNICRSPLAEGVFRTTVEKAGLSDRFLIDSAGTGGWHAGDPPDPRSIEVAARHGIDLTAQRARQVTDRDFEKFSIILAMDSDNLSTLKSRTRKGHPGLRLFLNSPPTNVPDPYYGGEDGFEQVYQMIVGGSQTLLNSLDKDSDT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8Z2</accession>
    <name>A0A0M7A8Z2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">TRAP transporter solute receptor, DctP family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_02580</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the bacterial solute-binding protein 7 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70700.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672168.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02580"/>
    <dbReference type="EnsemblBacteria" id="CTQ70700">
        <property type="protein sequence ID" value="CTQ70700"/>
        <property type="gene ID" value="LAX5112_02580"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071702">
        <property type="term" value="P:organic substance transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.190.170">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018389">
        <property type="entry name" value="DctP_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038404">
        <property type="entry name" value="TRAP_DctP_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33376">
        <property type="entry name" value="PTHR33376"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03480">
        <property type="entry name" value="DctP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0675">Receptor</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809526" evidence="3">
        <location>
            <begin position="30"/>
            <end position="332"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ70700.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="332" mass="35379" checksum="E3D5CF21E7D3BE49" modified="2015-12-09" version="1">MLKSRSLAKAGMTFAAAAAFGVAGLTAAAAETKWDMPTPYGDSNFHTQNIAAFADEVADKTGGSLTIQLHSAGSLFKHPEIKNAVRKGLAPIGEVLVSRLSNEDAVFGVDSVPFLAPSYDQAWKLYQASKPALEEKLAEQGLQLLYTVPWPPQGIYAKNEVTKGSDLSGLKFRAYNAATERLAILSDAIPTQIEVPDIPTAFSTGRVEAMITSPSTGANSKAWDFLTHYHDTQAWLPKNMVIVNKSAFDALNDAEKSAVLEAAATAETRGWEASKVETKSKTAVLAENGITVVQPSSELIADLAAIGETMATEWQEQAGEDGTAILEAYKAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A934</accession>
    <name>A0A0M7A934_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Apolipoprotein A1/A4/E domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02728</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71131.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672278.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02728"/>
    <dbReference type="EnsemblBacteria" id="CTQ71131">
        <property type="protein sequence ID" value="CTQ71131"/>
        <property type="gene ID" value="LAX5112_02728"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008289">
        <property type="term" value="F:lipid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006869">
        <property type="term" value="P:lipid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042157">
        <property type="term" value="P:lipoprotein metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000074">
        <property type="entry name" value="ApoA_E"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01442">
        <property type="entry name" value="Apolipoprotein"/>
        <property type="match status" value="12"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="104"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="146"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="21"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1720"/>
            <end position="1760"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="40"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1735"/>
            <end position="1759"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ71131.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="1899" mass="204856" checksum="7D4C79D240103438" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9A8</accession>
    <name>A0A0M7A9A8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Carboxylate/amino acid/amine transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02697</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71042.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008192141.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02697"/>
    <dbReference type="EnsemblBacteria" id="CTQ71042">
        <property type="protein sequence ID" value="CTQ71042"/>
        <property type="gene ID" value="LAX5112_02697"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000620">
        <property type="entry name" value="EamA_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00892">
        <property type="entry name" value="EamA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="39"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="65"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="103"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="128"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="154"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="182"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="214"/>
            <end position="231"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="277"/>
            <end position="310"/>
        </location>
    </feature>
    <feature type="domain" description="EamA" evidence="2">
        <location>
            <begin position="39"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="domain" description="EamA" evidence="2">
        <location>
            <begin position="182"/>
            <end position="310"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ71042.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="331" mass="35843" checksum="4572793ADDC9FC10" modified="2015-12-09" version="1">MDATPKKPTAEPVEDLPPSSNRFIKFFADRTSQLPPNTIGALWILLAAFLFSIMVTLIKFLGQDLSVFQILVVRQALMLLIVAPKVLPGLPGSLATKRPGLQLTRIVFATSAMLLGFTAIIEMPLADATAISFSKTFFITIFAIWFLGEQVGKHRWGATIVGFLGVLLMLRPSGEGLVDPFALMALGSAACAGMVMIVIRILTRTDPPNTILTYQAMGVGLIMIIPAWMTWQAPTLEQWALLAAVGFFSWAGQMANIKAFQAGEATAIASLDYTRLLYATLFGALIFSQWPGVETLIGASVVIAASIYTVRREAIRGRQLARASDGRGYSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="32" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9M9</accession>
    <name>A0A0M7A9M9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 8">Acetolactate synthase</fullName>
            <ecNumber evidence="4 8">2.2.1.6</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">ilvI</name>
        <name evidence="12" type="ORF">LAX5112_02660</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>H(+) + 2 pyruvate = (2S)-2-acetolactate + CO2</text>
            <dbReference type="Rhea" id="RHEA:25249"/>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:58476"/>
            <dbReference type="EC" id="2.2.1.6"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="8">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="8">Binds 1 Mg(2+) ion per subunit.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="8">
            <name>thiamine diphosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58937"/>
        </cofactor>
        <text evidence="8">Binds 1 thiamine pyrophosphate per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="1 8">Amino-acid biosynthesis; L-isoleucine biosynthesis; L-isoleucine from 2-oxobutanoate: step 1/4.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2 8">Amino-acid biosynthesis; L-valine biosynthesis; L-valine from pyruvate: step 1/4.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 8">Belongs to the TPP enzyme family.</text>
    </comment>
    <dbReference type="EC" id="2.2.1.6" evidence="4 8"/>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70940.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672229.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02660"/>
    <dbReference type="EnsemblBacteria" id="CTQ70940">
        <property type="protein sequence ID" value="CTQ70940"/>
        <property type="gene ID" value="LAX5112_02660"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00047">
        <property type="reaction ID" value="UER00055"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00049">
        <property type="reaction ID" value="UER00059"/>
    </dbReference>
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        <property type="project" value="UniProtKB-EC"/>
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        <property type="term" value="P:valine biosynthetic process"/>
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        <property type="project" value="UniProtKB-UniPathway"/>
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        <property type="entry name" value="TPP_AHAS"/>
        <property type="match status" value="1"/>
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        <property type="entry name" value="Acetolactate_synth_lsu"/>
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        <property type="entry name" value="DHS-like_NAD/FAD-binding_dom"/>
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        <property type="entry name" value="Thiamin_PyroP_enz_cen_dom"/>
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        <property type="match status" value="1"/>
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        <property type="match status" value="1"/>
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        <property type="entry name" value="SSF52467"/>
        <property type="match status" value="1"/>
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        <property type="entry name" value="SSF52518"/>
        <property type="match status" value="2"/>
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    <dbReference type="TIGRFAMs" id="TIGR00118">
        <property type="entry name" value="acolac_lg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 8" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="7 8" id="KW-0100">Branched-chain amino acid biosynthesis</keyword>
    <keyword evidence="8" id="KW-0460">Magnesium</keyword>
    <keyword evidence="8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0786">Thiamine pyrophosphate</keyword>
    <keyword evidence="6 8 12" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="TPP_enzyme_N" evidence="11">
        <location>
            <begin position="5"/>
            <end position="169"/>
        </location>
    </feature>
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            <begin position="400"/>
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    </feature>
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        <source>
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        <source>
            <dbReference type="ARBA" id="ARBA00007812"/>
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        <source>
            <dbReference type="ARBA" id="ARBA00013145"/>
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        <source>
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        <source>
            <dbReference type="ARBA" id="ARBA00023304"/>
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    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU003591"/>
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    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF00205"/>
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    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF02775"/>
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    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF02776"/>
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    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ70940.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="591" mass="64124" checksum="F05F653D1ACF0E2A" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9T1</accession>
    <name>A0A0M7A9T1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">S-adenosylmethionine synthase</fullName>
            <shortName evidence="11">AdoMet synthase</shortName>
            <ecNumber evidence="11">2.5.1.6</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="11">MAT</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="11">Methionine adenosyltransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11 17" type="primary">metK</name>
        <name evidence="17" type="ORF">LAX5112_02797</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="18" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="18">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11">Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 11">
            <text>ATP + H2O + L-methionine = diphosphate + phosphate + S-adenosyl-L-methionine</text>
            <dbReference type="Rhea" id="RHEA:21080"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57844"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="EC" id="2.5.1.6"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="11">
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </cofactor>
        <text evidence="11">Binds 1 potassium ion per subunit.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="11">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="11">Binds 2 divalent ions per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2 11">Amino-acid biosynthesis; S-adenosyl-L-methionine biosynthesis; S-adenosyl-L-methionine from L-methionine: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="11">Homotetramer; dimer of dimers.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="11 12">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 11 13">Belongs to the AdoMet synthase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.6" evidence="11"/>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71367.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672341.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02797"/>
    <dbReference type="EnsemblBacteria" id="CTQ71367">
        <property type="protein sequence ID" value="CTQ71367"/>
        <property type="gene ID" value="LAX5112_02797"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00315">
        <property type="reaction ID" value="UER00080"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004478">
        <property type="term" value="F:methionine adenosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006730">
        <property type="term" value="P:one-carbon metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006556">
        <property type="term" value="P:S-adenosylmethionine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00086">
        <property type="entry name" value="S_AdoMet_synth1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022631">
        <property type="entry name" value="ADOMET_SYNTHASE_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022630">
        <property type="entry name" value="S-AdoMet_synt_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022629">
        <property type="entry name" value="S-AdoMet_synt_central"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022628">
        <property type="entry name" value="S-AdoMet_synt_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002133">
        <property type="entry name" value="S-AdoMet_synthetase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022636">
        <property type="entry name" value="S-AdoMet_synthetase_sfam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11964">
        <property type="entry name" value="PTHR11964"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02773">
        <property type="entry name" value="S-AdoMet_synt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02772">
        <property type="entry name" value="S-AdoMet_synt_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00438">
        <property type="entry name" value="S-AdoMet_synt_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000497">
        <property type="entry name" value="MAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55973">
        <property type="entry name" value="SSF55973"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01034">
        <property type="entry name" value="metK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00376">
        <property type="entry name" value="ADOMET_SYNTHASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00377">
        <property type="entry name" value="ADOMET_SYNTHASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 11" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="11" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="9 11 12" id="KW-0460">Magnesium</keyword>
    <keyword evidence="6 11 12" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7 11" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4 11" id="KW-0554">One-carbon metabolism</keyword>
    <keyword evidence="10 11 12" id="KW-0630">Potassium</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 11 17" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="S-AdoMet_synt_N" evidence="14">
        <location>
            <begin position="5"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="domain" description="S-AdoMet_synt_M" evidence="15">
        <location>
            <begin position="118"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="domain" description="S-AdoMet_synt_C" evidence="16">
        <location>
            <begin position="236"/>
            <end position="378"/>
        </location>
    </feature>
    <feature type="region of interest" description="Flexible loop" evidence="11">
        <location>
            <begin position="102"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="17"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="19"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="45"/>
        </location>
        <ligand>
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="58"/>
        </location>
        <ligand>
            <name>L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:57844"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="102"/>
        </location>
        <ligand>
            <name>L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:57844"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <begin position="167"/>
            <end position="169"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="242"/>
        </location>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <begin position="248"/>
            <end position="249"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="265"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <note>ligand shared between two neighboring subunits</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="269"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <note>ligand shared between two neighboring subunits</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="273"/>
        </location>
        <ligand>
            <name>L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:57844"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005224"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009685"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022563"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022958"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00086"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU000542"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU004462"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF00438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="Pfam" id="PF02772"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="Pfam" id="PF02773"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="CTQ71367.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="390" mass="41911" checksum="C56322E7017E0472" modified="2015-12-09" version="1">MARQNYLFTSESVSEGHPDKVCDRISDAVVDAYLREMPEARVAAETLATTNRIVIAGETRGPATITNEYIAHLARMAVKDIGYEQDGFHWEDCDIAVHLHAQSAHIAQGVDAGGNKDEGAGDQGIMFGFACRETEELMPAPILFSHKILKTLAEARKTGKEPVLGPDAKSQVTVRYENGKPVGVTSIVLSTQHLDPALTSPDVKAIVEPYILSSLPDGWVTDETVWHVNPTGAFVIGGPDGDAGLTGRKIIVDTYGGAAPHGGGAFSGKDPTKVDRSAAYAARYLAKNVVAADLADRCTIQLSYAIGVSDPLSVYVDFHGTGRCDEAKLETALRDVMGLSPRGIREHLQLNNPIYERTAAYGHFGRQPDADGGFSWEKTDLVDELRPLAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9T8</accession>
    <name>A0A0M7A9T8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Aerobic magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase</fullName>
            <shortName evidence="7">Aerobic Mg-protoporphyrin IX monomethyl ester oxidative cyclase</shortName>
            <ecNumber evidence="7">1.14.13.81</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">acsF</name>
        <name evidence="9" type="ORF">LAX5112_02955</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>2 H(+) + Mg-protoporphyrin IX 13-monomethyl ester + 3 NADPH + 3 O2 = 3,8-divinyl protochlorophyllide a + 5 H2O + 3 NADP(+)</text>
            <dbReference type="Rhea" id="RHEA:33235"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="ChEBI" id="CHEBI:58632"/>
            <dbReference type="ChEBI" id="CHEBI:60491"/>
            <dbReference type="EC" id="1.14.13.81"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="7">
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="7">Porphyrin-containing compound metabolism; bacteriochlorophyll biosynthesis (light-independent).</text>
    </comment>
    <comment type="pathway">
        <text evidence="2">Porphyrin-containing compound metabolism; chlorophyll biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 7">Belongs to the AcsF family.</text>
    </comment>
    <dbReference type="EC" id="1.14.13.81" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71868.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008190570.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02955"/>
    <dbReference type="EnsemblBacteria" id="CTQ71868">
        <property type="protein sequence ID" value="CTQ71868"/>
        <property type="gene ID" value="LAX5112_02955"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00668"/>
    <dbReference type="UniPathway" id="UPA00671"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048529">
        <property type="term" value="F:magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0036070">
        <property type="term" value="P:light-independent bacteriochlorophyll biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015979">
        <property type="term" value="P:photosynthesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01840">
        <property type="entry name" value="AcsF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008434">
        <property type="entry name" value="AcsF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009078">
        <property type="entry name" value="Ferritin-like_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003251">
        <property type="entry name" value="Rubrerythrin"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31053">
        <property type="entry name" value="PTHR31053"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02915">
        <property type="entry name" value="Rubrerythrin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47240">
        <property type="entry name" value="SSF47240"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02029">
        <property type="entry name" value="AcsF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0077">Bacteriochlorophyll biosynthesis</keyword>
    <keyword evidence="6 7" id="KW-0149">Chlorophyll biosynthesis</keyword>
    <keyword evidence="7" id="KW-0408">Iron</keyword>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5 7" id="KW-0521">NADP</keyword>
    <keyword evidence="7" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4 7" id="KW-0602">Photosynthesis</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Rubrerythrin" evidence="8">
        <location>
            <begin position="101"/>
            <end position="229"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000655"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005173"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006550"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022531"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF02915"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ71868.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="369" mass="43326" checksum="969C3B9CC9F4D347" modified="2015-12-09" version="1">MNKPVSPTELASNEPTLEKRRAAVNDTTKSALVSTMLTPRFYTTDFDEMDKINVEPVREEWDALISQMRSDPNRGHFKRTEAWDDIDIDALPDDLREELVDFLVSSLTSEFSGCVLYKEMKRRGKNQEICELFGYMSRDESRHAGFINDALKDFGIGVNMGFLAKAKKYTYFKPKFIYYATYLSEKIGYARYITIYRHLEKHPELRFHPIFKWFKEWCNDEFSHGEAFSLIIRSDKRLLEGRNKLWIKFFLLAVFATMYVRDHMRPAFHKALGINIEDYDMRVFRLTSEISRQCFPLELDLDNPKLVEGFRRMERISRKMQAATEKGGLFGQLGRAWWGAAAGLNFVRMYMIPTKKNTLPETSRLQPVW</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9X5</accession>
    <name>A0A0M7A9X5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Universal stress protein G</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">uspG_2</name>
        <name evidence="3" type="ORF">LAX5112_02981</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the universal stress protein A family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71945.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672485.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ71945">
        <property type="protein sequence ID" value="CTQ71945"/>
        <property type="gene ID" value="LAX5112_02981"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006015">
        <property type="entry name" value="Universal_stress_UspA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006016">
        <property type="entry name" value="UspA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00582">
        <property type="entry name" value="Usp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01438">
        <property type="entry name" value="UNVRSLSTRESS"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Usp" evidence="2">
        <location>
            <begin position="22"/>
            <end position="136"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008791"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00582"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ71945.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="137" mass="15305" checksum="03C309DA48C945B5" modified="2015-12-09" version="1">MPSDTSLILCPVNLRHVQLNVTAYEEAKAMAKRRAAKLLVATIAPEMERNLNIRDSASYWEEQLKSFVEQHPAEGIELETVVRLGAVHRQIVKLADERNVDLIVMESANPRVQDYLLGTTASHVVAHAKCSVYVVRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAV7</accession>
    <name>A0A0M7AAV7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02864</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71556.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672384.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02864"/>
    <dbReference type="EnsemblBacteria" id="CTQ71556">
        <property type="protein sequence ID" value="CTQ71556"/>
        <property type="gene ID" value="LAX5112_02864"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ71556.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="261" mass="29403" checksum="0AB1BE3C79662C8A" modified="2015-12-09" version="1">MSKYEPLREHLARMDDVVWAAKLDEVEEIIGSNLPRSAREHRTWWANSGGSLVHQNAWLDAGWRVERTDLNRDVIIFRRLRIGGTSIAAQSQRAQKDVRNPQRAAEKRLTREMASLRQPATVTLRTEWTTLGDVQKTPCSNSTIPRDAGVVRFAAMDGEEVRTVIVATPSIQKLYRALRLEMKGMSGSDEDLPALKLISKSGFDPKQPIECDVVKSGNAWLLTDGRGRKAKMDDKTECHLVAQLLYVQELQSGRTSKLLQV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="31" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABC7</accession>
    <name>A0A0M7ABC7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Adenosylhomocysteinase</fullName>
            <ecNumber evidence="4">3.3.1.1</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">S-adenosyl-L-homocysteine hydrolase</fullName>
            <shortName evidence="4">AdoHcyase</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9" type="primary">ahcY_2</name>
        <name evidence="4" type="synonym">ahcY</name>
        <name evidence="9" type="ORF">LAX5112_02914</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4 6">
            <text>H2O + S-adenosyl-L-homocysteine = adenosine + L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:21708"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16335"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:58199"/>
            <dbReference type="EC" id="3.3.1.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="4 6">
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </cofactor>
        <text evidence="4 6">Binds 1 NAD(+) per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="4 6">Amino-acid biosynthesis; L-homocysteine biosynthesis; L-homocysteine from S-adenosyl-L-homocysteine: step 1/1.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 4 7">Belongs to the adenosylhomocysteinase family.</text>
    </comment>
    <dbReference type="EC" id="3.3.1.1" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71706.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040452752.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02914"/>
    <dbReference type="EnsemblBacteria" id="CTQ71706">
        <property type="protein sequence ID" value="CTQ71706"/>
        <property type="gene ID" value="LAX5112_02914"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00314">
        <property type="reaction ID" value="UER00076"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004013">
        <property type="term" value="F:adenosylhomocysteinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006730">
        <property type="term" value="P:one-carbon metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00401">
        <property type="entry name" value="SAHH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1480">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00563">
        <property type="entry name" value="AdoHcyase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042172">
        <property type="entry name" value="Adenosylhomocyst_ase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000043">
        <property type="entry name" value="Adenosylhomocysteinase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015878">
        <property type="entry name" value="Ado_hCys_hydrolase_NAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020082">
        <property type="entry name" value="S-Ado-L-homoCys_hydrolase_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23420">
        <property type="entry name" value="PTHR23420"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05221">
        <property type="entry name" value="AdoHcyase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00670">
        <property type="entry name" value="AdoHcyase_NAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001109">
        <property type="entry name" value="Ad_hcy_hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00996">
        <property type="entry name" value="AdoHcyase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00997">
        <property type="entry name" value="AdoHcyase_NAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00936">
        <property type="entry name" value="ahcY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00738">
        <property type="entry name" value="ADOHCYASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00739">
        <property type="entry name" value="ADOHCYASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 6 9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3 4 6" id="KW-0520">NAD</keyword>
    <keyword evidence="2 4 6" id="KW-0554">One-carbon metabolism</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AdoHcyase_NAD" evidence="8">
        <location>
            <begin position="223"/>
            <end position="382"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4 5">
        <location>
            <position position="54"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4 5">
        <location>
            <position position="127"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4 5">
        <location>
            <position position="188"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="189"/>
            <end position="191"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4 5">
        <location>
            <position position="218"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4 5">
        <location>
            <position position="222"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="223"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="252"/>
            <end position="257"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="275"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="310"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="331"/>
            <end position="333"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="376"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007122"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022563"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00563"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR001109-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU000548"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU004166"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="SMART" id="SM00997"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ71706.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="462" mass="50718" checksum="A21A2EDA7EF77491" modified="2015-12-09" version="1">MADYIVKDIGLADWGRTEIEIAEHEMPGLMACREEFGESKPLKGARIAGSLHMTIQTAVLIETLVALGAEVRWASCNIYSTQDQAAAAIAASGVPVFAVKGETLEEYWDYADKIFDFEDGANMILDDGGDATLYILHGARVEAGETDLIENPKSEEEEALFAQIKKRAAANPGWFTKQRDMLQGVTEETTTGVLRLYEMQKNGKLPFPAINVNDSVTKSKFDNRYGCRESLVDGIRRGTDVMMSGKVAVVCGYGDVGKGSAQSLAGAGARVIVTEIDPICALQASMDGFEVKTMEQVLPEGDIYVTATGNKDIITFDHMRGMKDMAIVCNIGHFDNEIQVAALKNTKLRPVKDQVDMYEFPDGKRMILLSQGRLVNLGNATGHPSFVMSASFTNQVLAQIELFTKGDQYKNEVYVLPKHLDEKVARLHLAKLGVTLTELSDDQADYLGINKSGPFKAEHYKY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABH8</accession>
    <name>A0A0M7ABH8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Acyl-CoA thioester hydrolase YbgC</fullName>
            <ecNumber evidence="4">3.1.2.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">ybgC</name>
        <name evidence="4" type="ORF">LAX5112_03192</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the 4-hydroxybenzoyl-CoA thioesterase family.</text>
    </comment>
    <dbReference type="EC" id="3.1.2.-" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72468.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672631.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03192"/>
    <dbReference type="EnsemblBacteria" id="CTQ72468">
        <property type="protein sequence ID" value="CTQ72468"/>
        <property type="gene ID" value="LAX5112_03192"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016790">
        <property type="term" value="F:thiolester hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008272">
        <property type="entry name" value="HB-CoA_thioesterase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029069">
        <property type="entry name" value="HotDog_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006683">
        <property type="entry name" value="Thioestr_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014166">
        <property type="entry name" value="Tol-Pal_acyl-CoA_thioesterase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006684">
        <property type="entry name" value="YbgC/YbaW"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03061">
        <property type="entry name" value="4HBT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF003230">
        <property type="entry name" value="YbgC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54637">
        <property type="entry name" value="SSF54637"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02799">
        <property type="entry name" value="thio_ybgC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00051">
        <property type="entry name" value="TIGR00051"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01328">
        <property type="entry name" value="4HBCOA_THIOESTERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="4HBT" evidence="3">
        <location>
            <begin position="31"/>
            <end position="118"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005953"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF03061"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ72468.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="153" mass="17206" checksum="843BC1709A68F703" modified="2015-12-09" version="1">MSDWPDLAGRLDQSGHVLPVRVYYEDTDFTGIVYHGAYVRFFERARSDFLRLIGIHHSELAEGDDGTSLAFAVRTMTLDFQKPAKIDDVLEVRTSLAEYKGARIKLDQLIYRGDELLVSAAVTVAVISSEGRPTRLPSVLSEKLLKHRPSEQD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABJ6</accession>
    <name>A0A0M7ABJ6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative inner membrane transporter yiJE</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yijE_1</name>
        <name evidence="3" type="ORF">LAX5112_03205</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72505.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672640.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03205"/>
    <dbReference type="EnsemblBacteria" id="CTQ72505">
        <property type="protein sequence ID" value="CTQ72505"/>
        <property type="gene ID" value="LAX5112_03205"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000620">
        <property type="entry name" value="EamA_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00892">
        <property type="entry name" value="EamA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="33"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="65"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="90"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="126"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="151"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="182"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="212"/>
            <end position="232"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="244"/>
            <end position="263"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="269"/>
            <end position="291"/>
        </location>
    </feature>
    <feature type="domain" description="EamA" evidence="2">
        <location>
            <begin position="6"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="domain" description="EamA" evidence="2">
        <location>
            <begin position="151"/>
            <end position="285"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ72505.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="301" mass="31489" checksum="07A6C15040961E9C" modified="2015-12-09" version="1">MKLQHWILLICLGAIWGGSFIFAKVAVAEIPPLTLVFFRVASACLTLWLVLWAQGTLKHFPLKMAASFLAMGLLNNVIPFSLLFAGQTVIGAGLASILNATTPVFTVLVAGVLFRQETLGIHKIAGIALGIAGVATMLSGSLSGIVSDPLWAQAACLGAALSYAFAATFAKRFKGLPPLISATGQLSGSTLIMAPIALFASRSWSVADPSVIAWLNVLALGIFATALAYLMYFRLLAEAGATNASLVTLLVPASALFFGWLLLGEELSAIQLAGFALLLGGLVVLDGRLFARFKPVSTPAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABX8</accession>
    <name>A0A0M7ABX8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Putative L-galactonate oxidoreductase</fullName>
            <ecNumber evidence="1">1.1.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yjjN_2</name>
        <name evidence="1" type="ORF">LAX5112_02968</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.1.1.-" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71906.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672544.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02968"/>
    <dbReference type="EnsemblBacteria" id="CTQ71906">
        <property type="protein sequence ID" value="CTQ71906"/>
        <property type="gene ID" value="LAX5112_02968"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0036354">
        <property type="term" value="F:2-desacetyl-2-hydroxyethyl bacteriochlorophyllide a dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005903">
        <property type="entry name" value="BchC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011032">
        <property type="entry name" value="GroES-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50129">
        <property type="entry name" value="SSF50129"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01202">
        <property type="entry name" value="bchC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ71906.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="313" mass="32992" checksum="56A29422724B8038" modified="2015-12-09" version="1">METTAIVFEDPGKLQVKQLGLTEPSDFDVVVETLVSGVSTGTEKMLFDGTMPAFPGMKYPLVPGYESVARVVGAGPLSGREIGETVFIPGASCFEGAAGLFGATANRLVLPGVRTIQISEDFSEDAVLLALAATAHHALIRAESPVDLIIGHGVLGRLMARLACALGQEPPIVTETCTARMHGADDYDVLDPNDARASKSFDTIIDASGNQDALDPAIGRLTKGGKLVLAGFYGERVSFAFPAAFMREISVLLSAEFKPDDLQAVVDLVVSGRLSLGGLVTHHAAPTDAATAYRTAFEDPTCLKMVIDWRKAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACE3</accession>
    <name>A0A0M7ACE3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Transcriptional regulatory protein TdiR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">tdiR_1</name>
        <name evidence="5" type="ORF">LAX5112_03038</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72076.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672554.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03038"/>
    <dbReference type="EnsemblBacteria" id="CTQ72076">
        <property type="protein sequence ID" value="CTQ72076"/>
        <property type="gene ID" value="LAX5112_03038"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06170">
        <property type="entry name" value="LuxR_C_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016032">
        <property type="entry name" value="Sig_transdc_resp-reg_C-effctor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000792">
        <property type="entry name" value="Tscrpt_reg_LuxR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00196">
        <property type="entry name" value="GerE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00038">
        <property type="entry name" value="HTHLUXR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00421">
        <property type="entry name" value="HTH_LUXR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46894">
        <property type="entry name" value="SSF46894"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50043">
        <property type="entry name" value="HTH_LUXR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="4">
        <location>
            <begin position="7"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="domain" description="HTH luxR-type" evidence="3">
        <location>
            <begin position="135"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="2">
        <location>
            <position position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ72076.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="203" mass="21877" checksum="D2D7C277A633E88B" modified="2015-12-09" version="1">MKANADAIYIVDDDAAVRDALSVLFNMEGFIVETFTDGDAFVQSASKAVPACIMLDVHMPGRSGIEILKALNAENYPAPIFIISGQGDIPLAVEAIRNGAHDFIEKPFSAESVLERVREGINAMKQRQSSDGGMQFDGVDLLTRRELEVLKEITDGASNKEAGRTLGISPRTVEVHRARIMEKLGARNAAELVRIVLGHGASG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACF3</accession>
    <name>A0A0M7ACF3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">UPF0335 protein LAX5112_03138</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_03138</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UPF0335 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72317.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451037.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03138"/>
    <dbReference type="EnsemblBacteria" id="CTQ72317">
        <property type="protein sequence ID" value="CTQ72317"/>
        <property type="gene ID" value="LAX5112_03138"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00797">
        <property type="entry name" value="UPF0335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018753">
        <property type="entry name" value="GapR-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046367">
        <property type="entry name" value="GapR-like_DNA-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10073">
        <property type="entry name" value="DUF2312"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF2312" evidence="3">
        <location>
            <begin position="8"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="12"/>
            <end position="39"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00797"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF10073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ72317.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="88" mass="9780" checksum="CADCB5EDE409E513" modified="2015-12-09" version="1">MSDPGGVAADQLRAFIERIERLEEEKKVISDDIKDVYAEAKGNGYDVKILRKVVSLRKKQPHEREEEEAVLDLYLHALGMAGAGPSEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACT1</accession>
    <name>A0A0M7ACT1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">5-formyltetrahydrofolate cyclo-ligase</fullName>
            <ecNumber evidence="3">6.3.3.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_03182</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>(6S)-5-formyl-5,6,7,8-tetrahydrofolate + ATP = 5,10-methenyltetrahydrofolate + ADP + phosphate</text>
            <dbReference type="Rhea" id="RHEA:10488"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57455"/>
            <dbReference type="ChEBI" id="CHEBI:57457"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.3.2"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="3">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.</text>
    </comment>
    <dbReference type="EC" id="6.3.3.2" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72441.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672625.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03182"/>
    <dbReference type="EnsemblBacteria" id="CTQ72441">
        <property type="protein sequence ID" value="CTQ72441"/>
        <property type="gene ID" value="LAX5112_03182"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030272">
        <property type="term" value="F:5-formyltetrahydrofolate cyclo-ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10420">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002698">
        <property type="entry name" value="FTHF_cligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024185">
        <property type="entry name" value="FTHF_cligase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037171">
        <property type="entry name" value="NagB/RpiA_transferase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23407:SF1">
        <property type="entry name" value="PTHR23407:SF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01812">
        <property type="entry name" value="5-FTHF_cyc-lig"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006806">
        <property type="entry name" value="FTHF_cligase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100950">
        <property type="entry name" value="SSF100950"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02727">
        <property type="entry name" value="MTHFS_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0436">Ligase</keyword>
    <keyword evidence="3" id="KW-0460">Magnesium</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="binding site" evidence="2">
        <location>
            <begin position="11"/>
            <end position="15"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="61"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <begin position="134"/>
            <end position="142"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010638"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR006806-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU361279"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ72441.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="192" mass="21045" checksum="9A2047BE72BABD8D" modified="2015-12-09" version="1">MTTNLSLADDKQRLRKEALARRKAMPEVVRIEKSLALADHVSDLPIPEGAVVAGFWPIRDEIDPRPLLDRLRQNGHTLCLPVVADPYLIFRKLDRGCAMEDAGFGTMAPGPDAEELRPDVLLMPLAGFDRQGNRIGYGKGHYDTAISSLEKSGPLLCIGLAFALQEVELVPAEGHDKPLAGILTEDGYRSFC</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AD18</accession>
    <name>A0A0M7AD18_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Inner membrane protein CreD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">creD</name>
        <name evidence="3" type="ORF">LAX5112_02856</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71534.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672378.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02856"/>
    <dbReference type="EnsemblBacteria" id="CTQ71534">
        <property type="protein sequence ID" value="CTQ71534"/>
        <property type="gene ID" value="LAX5112_02856"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010364">
        <property type="entry name" value="Uncharacterised_IM_CreD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30092">
        <property type="entry name" value="PTHR30092"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06123">
        <property type="entry name" value="CreD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004548">
        <property type="entry name" value="CreD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="36"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="329"/>
            <end position="348"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="354"/>
            <end position="375"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="382"/>
            <end position="401"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="407"/>
            <end position="426"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="433"/>
            <end position="451"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ71534.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="472" mass="51148" checksum="D8A8DAA0E30EF258" modified="2015-12-09" version="1">MANATSAPAAEDENGSSRNRQSPKLPAVLKSPAVKIFLIGFLTILLLIPTTFVWLLVEERADRAKGVAADIARSWGGTQSINGPYLAIPFTETVVSGEGEKRQRTVHHRTVVLFPERLELKGDIGVEERRKSIYSLPVYSGQMSMEGRFAAPPSGIFEPKDGGTIKIATNKAMVVVGISDVRALRSEVAIRLNNAQTVQFEPGLGVLAKHSGSGINAPIAADNWQRGFSFDLAMHLNGSSALFAAPAGQTTLVTLQSDWPHPGFTGAFLPEQRSITDSGFTANWTIPYLARGIPKTMEVDSLPLSGKLMGVKFVEPVNFYQTISRSLKYAIGFISLTFLAVFVLEMRSGWQFHWIQYGLVGCALIIFYVMLLAFAEHIGYGRAYLVAAGSATLLNAIYVGTSLKSRIAGFVIAAVLTGIFATLYALMREQDYALLIGSVIAFAALAVTMFVTQRIDWSGLDAPRPQAHSQTV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADZ3</accession>
    <name>A0A0M7ADZ3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Voltage-gated potassium channel</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">LAX5112_03497</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73308.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672878.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ73308">
        <property type="protein sequence ID" value="CTQ73308"/>
        <property type="gene ID" value="LAX5112_03497"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005267">
        <property type="term" value="F:potassium channel activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003280">
        <property type="entry name" value="2pore_dom_K_chnl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013099">
        <property type="entry name" value="K_chnl_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11003">
        <property type="entry name" value="PTHR11003"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07885">
        <property type="entry name" value="Ion_trans_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8" id="KW-0407">Ion channel</keyword>
    <keyword evidence="8" id="KW-0406">Ion transport</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="24"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="78"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="domain" description="Ion_trans_2" evidence="7">
        <location>
            <begin position="32"/>
            <end position="102"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF07885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ73308.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="122" mass="13346" checksum="12463C5E9A96F7A5" modified="2015-12-09" version="1">MLSTALTLVRLLKAILRSWNRPHFRSGFLLAGLILFSGTVFYKTVEGWSWVDALYFSAMTLATVGVSDLAPQSVAGRLFTVLYLFVGVGVFVALFAQFARALLQIEQEVDLAEDPKTDGNAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AE71</accession>
    <name>A0A0M7AE71_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03365</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72917.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72917">
        <property type="protein sequence ID" value="CTQ72917"/>
        <property type="gene ID" value="LAX5112_03365"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="11"/>
            <end position="25"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72917.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="58" mass="6498" checksum="154111CB28DC77E7" modified="2015-12-09" version="1">MSRPPVGDAKNSSVERTTVRSDPVSQQNLMPRLLCSFSTPKINEYKLPKSGELIYIFA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEA0</accession>
    <name>A0A0M7AEA0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative acetyltransferase involved in intracellular survival</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03380</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72947.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672786.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72947">
        <property type="protein sequence ID" value="CTQ72947"/>
        <property type="gene ID" value="LAX5112_03380"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13673">
        <property type="entry name" value="Acetyltransf_10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="3"/>
            <end position="153"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72947.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="153" mass="16896" checksum="436BDAE8B1DB2A48" modified="2015-12-09" version="1">MTVTLRPVAPSDCDLICRHRHDMFQAAGDHKAAKAALTPAYRNWQQHALQSGSYFGFIAEVDGAAVGGVGLMVVDWPPHQLNPDVLQRGYVLNVFVEPEHRGQGIAKDMMAASDAAFQKRNVTHAVLTATDQARPIYEKDGWQQTAQMAKEIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AG10</accession>
    <name>A0A0M7AG10_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Universal stress protein E</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">uspE</name>
        <name evidence="3" type="ORF">LAX5112_03440</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the universal stress protein A family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73150.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672846.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03440"/>
    <dbReference type="EnsemblBacteria" id="CTQ73150">
        <property type="protein sequence ID" value="CTQ73150"/>
        <property type="gene ID" value="LAX5112_03440"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006015">
        <property type="entry name" value="Universal_stress_UspA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006016">
        <property type="entry name" value="UspA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00582">
        <property type="entry name" value="Usp"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01438">
        <property type="entry name" value="UNVRSLSTRESS"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Usp" evidence="2">
        <location>
            <begin position="9"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="domain" description="Usp" evidence="2">
        <location>
            <begin position="180"/>
            <end position="316"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008791"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00582"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ73150.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="327" mass="35368" checksum="BD11C6E49AFA7DE0" modified="2015-12-09" version="1">MIGELRCPKKILAVIDDTDTQIALKSAAELAKAHKAGLEVIACVEPPQDIAIIARLAGRDKDAIIEEMVTRARGGATENLKRVLPDQAIEPRIVVGKAYLSIIRHVGETGCDFVVKAAEPLTGINGYLHASNDQHLLRKCPCPVWLQSGTAEPVPRRVIAAVDLDNWDAAEPDTLDLLNQRVVEAAARVAHAHGAEIIVLHAWDAVGEGMVWAFSDTGDARKAANDYVRETVKIREEAMRQLLKTLRRRLASPNVVLQPLLVRGAVERVIEIQSNLQNADLVVMGTVARTGLSGVFIGNTAENIVNSLKCPVLAVKPEGFVSPLLTP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AG29</accession>
    <name>A0A0M7AG29_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">General stress protein 18</fullName>
            <ecNumber evidence="3">3.2.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yfkM_2</name>
        <name evidence="3" type="ORF">LAX5112_03447</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.2.-.-" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73170.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672851.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03447"/>
    <dbReference type="EnsemblBacteria" id="CTQ73170">
        <property type="protein sequence ID" value="CTQ73170"/>
        <property type="gene ID" value="LAX5112_03447"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016798">
        <property type="term" value="F:hydrolase activity, acting on glycosyl bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008152">
        <property type="term" value="P:metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002818">
        <property type="entry name" value="DJ-1/PfpI"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01965">
        <property type="entry name" value="DJ-1_PfpI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="SSF52317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DJ-1_PfpI" evidence="2">
        <location>
            <begin position="31"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="50"/>
            <end position="78"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01965"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ73170.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="231" mass="24366" checksum="C97FFD2AE3EF7B80" modified="2015-12-09" version="1">MPQVSDKKVLIVLTSHEDLGDTGQKTGFWVEEFAAPYYVFKDAGASITLASPKGGQPPIDPKSSDPSAATEATRRFDADPETQQILANTLKLDDVNAADYDAIFYPGGHGPLWDLTNDTTSIGLIETFFNSGKPVGAVCHAPAVLLNAKTPDGAPLVKGRKVAGFTNDEEEAVGLTNVVPFLLEDELKAKGGVYESVASWSSFAVEDGNLITGQNPASSEAVAEKILAKLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGI1</accession>
    <name>A0A0M7AGI1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Long-chain-fatty-acid--CoA ligase</fullName>
            <ecNumber evidence="4">6.2.1.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">lcfB_3</name>
        <name evidence="4" type="ORF">LAX5112_03726</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="6.2.1.3" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74009.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673058.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03726"/>
    <dbReference type="EnsemblBacteria" id="CTQ74009">
        <property type="protein sequence ID" value="CTQ74009"/>
        <property type="gene ID" value="LAX5112_03726"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004467">
        <property type="term" value="F:long-chain fatty acid-CoA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12780">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025110">
        <property type="entry name" value="AMP-bd_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045851">
        <property type="entry name" value="AMP-bd_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020845">
        <property type="entry name" value="AMP-binding_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000873">
        <property type="entry name" value="AMP-dep_Synth/Lig"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042099">
        <property type="entry name" value="ANL_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00501">
        <property type="entry name" value="AMP-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13193">
        <property type="entry name" value="AMP-binding_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00455">
        <property type="entry name" value="AMP_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0007">Acetylation</keyword>
    <keyword evidence="4" id="KW-0436">Ligase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AMP-binding" evidence="2">
        <location>
            <begin position="11"/>
            <end position="401"/>
        </location>
    </feature>
    <feature type="domain" description="AMP-binding_C" evidence="3">
        <location>
            <begin position="411"/>
            <end position="486"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022990"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF13193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ74009.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="495" mass="53427" checksum="5FE561859EB54889" modified="2015-12-09" version="1">MNLARYCLTNASPDPDKVALEVIGIAGARLEIWTYADLTRSILSVASGLRLEGFERGDRVLLRIGHSSDFPLLFFGSIAAGLVPVPTSALLTSTETDTILSDSGAAVVVHDGKTALPQAGAARVVGPEGIAQLKQADPGDFENTAADDPAFLIYTSGTSGTPKGVLHAQRAAAARAPMYQGWYGIHAEDRLLHAGAFNWTYTLGVGLMDPWANGATSVVYDGPRDPHVWPEILTTSNATLFAAVPSLYRRILKYGEVSEGSFPNLRHGLTAGEALPAALYHAWKDRTGRELYEALGMSEISTYLSSSPNVPVKPGSPGRPQIGRKVAILDETAEGDKFAEPDKAGLLAVQRDEPGLMLGYWNRPEETQAAFRGDWFLTGDRARADEDGYYWYEGRADDLMNAFGYRVAPEEVERTLVAHPEVSEVAVTTVSSGSGVDLITAFVVPADPDSFDETDLAAFAVDRLADYKRPKVYRIISELPRTPSGKVQRKALSKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHE6</accession>
    <name>A0A0M7AHE6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03606</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73640.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672961.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ73640">
        <property type="protein sequence ID" value="CTQ73640"/>
        <property type="gene ID" value="LAX5112_03606"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="88"/>
            <end position="112"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73640.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="112" mass="13425" checksum="9BBC2A3E11E1CDF0" modified="2015-12-09" version="1">MHHTETRRPMKLLIRDVLRARHGRRDFLEHPSVAEIHRRLPDDLLEWFERVVIIERDPLTILCGPIDKSDWGYFEIWRYMRDRDYPDFDPDPDNGSDGDLDPENAALPYSPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHH1</accession>
    <name>A0A0M7AHH1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Phosphatidylserine decarboxylase proenzyme</fullName>
            <ecNumber evidence="9">4.1.1.65</ecNumber>
        </recommendedName>
        <component>
            <recommendedName>
                <fullName evidence="9">Phosphatidylserine decarboxylase alpha chain</fullName>
            </recommendedName>
        </component>
        <component>
            <recommendedName>
                <fullName evidence="9">Phosphatidylserine decarboxylase beta chain</fullName>
            </recommendedName>
        </component>
    </protein>
    <gene>
        <name evidence="9" type="primary">psd</name>
        <name evidence="11" type="ORF">LAX5112_03834</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>a 1,2-diacyl-sn-glycero-3-phospho-L-serine + H(+) = a 1,2-diacyl-sn-glycero-3-phosphoethanolamine + CO2</text>
            <dbReference type="Rhea" id="RHEA:20828"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:57262"/>
            <dbReference type="ChEBI" id="CHEBI:64612"/>
            <dbReference type="EC" id="4.1.1.65"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="9">
            <name>pyruvate</name>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
        </cofactor>
        <text evidence="9">Binds 1 pyruvoyl group covalently per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="9">Phospholipid metabolism; phosphatidylethanolamine biosynthesis; phosphatidylethanolamine from CDP-diacylglycerol: step 2/2.</text>
    </comment>
    <comment type="subunit">
        <text evidence="9">Heterodimer of a large membrane-associated beta subunit and a small pyruvoyl-containing alpha subunit.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cell membrane</location>
            <topology evidence="9">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="PTM">
        <text evidence="9">Is synthesized initially as an inactive proenzyme. Formation of the active enzyme involves a self-maturation process in which the active site pyruvoyl group is generated from an internal serine residue via an autocatalytic post-translational modification. Two non-identical subunits are generated from the proenzyme in this reaction, and the pyruvate is formed at the N-terminus of the alpha chain, which is derived from the carboxyl end of the proenzyme. The post-translation cleavage follows an unusual pathway, termed non-hydrolytic serinolysis, in which the side chain hydroxyl group of the serine supplies its oxygen atom to form the C-terminus of the beta chain, while the remainder of the serine residue undergoes an oxidative deamination to produce ammonia and the pyruvoyl prosthetic group on the alpha chain.</text>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the phosphatidylserine decarboxylase family. PSD-A subfamily.</text>
    </comment>
    <dbReference type="EC" id="4.1.1.65" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74349.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673152.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03834"/>
    <dbReference type="EnsemblBacteria" id="CTQ74349">
        <property type="protein sequence ID" value="CTQ74349"/>
        <property type="gene ID" value="LAX5112_03834"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00558">
        <property type="reaction ID" value="UER00616"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004609">
        <property type="term" value="F:phosphatidylserine decarboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006646">
        <property type="term" value="P:phosphatidylethanolamine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00664">
        <property type="entry name" value="PS_decarb_PSD_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003817">
        <property type="entry name" value="PS_Dcarbxylase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033175">
        <property type="entry name" value="PSD-A"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35809">
        <property type="entry name" value="PTHR35809"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02666">
        <property type="entry name" value="PS_Dcarbxylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00164">
        <property type="entry name" value="PS_decarb_rel"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="2 9" id="KW-0210">Decarboxylase</keyword>
    <keyword evidence="1 9" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="3 9" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="6 9" id="KW-0456">Lyase</keyword>
    <keyword evidence="9 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="5 9" id="KW-0594">Phospholipid biosynthesis</keyword>
    <keyword evidence="7 9" id="KW-1208">Phospholipid metabolism</keyword>
    <keyword evidence="8 9" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="10" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4 9" id="KW-0865">Zymogen</keyword>
    <feature type="chain" id="PRO_5023499067" description="Phosphatidylserine decarboxylase beta chain" evidence="9">
        <location>
            <begin position="1"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5023499068" description="Phosphatidylserine decarboxylase alpha chain" evidence="9">
        <location>
            <begin position="190"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="21"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="active site" description="Schiff-base intermediate with substrate; via pyruvic acid" evidence="9">
        <location>
            <position position="190"/>
        </location>
    </feature>
    <feature type="site" description="Cleavage (non-hydrolytic); by autocatalysis" evidence="9">
        <location>
            <begin position="189"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="modified residue" description="Pyruvic acid (Ser); by autocatalysis" evidence="9">
        <location>
            <position position="190"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022793"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023145"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023209"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023264"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023317"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ74349.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="234" mass="25333" checksum="77D62CF4740817DA" modified="2015-12-09" version="1">MSIVDSVTKSLVPVHREGWPFVAIALVATLVVGWFVDPLFWIGLFFTGWVCYFFRDPQRVTPVGDGLVISPADGVVSHVGPVRPPEELELGAEPLVRVSIFMNVFNCHVNRAPVGGKIVRVAYRAGKFLNAELDKASDDNERNGLVIDHNGTNIGVVQIAGLVARRIVCFVKEGENLSAGERFGLIRFGSRLDVYFPAGTVPKVALGQTMIAGETVLADLNQPQAPAPTLTRVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHP7</accession>
    <name>A0A0M7AHP7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03709</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ73962.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673047.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03709"/>
    <dbReference type="EnsemblBacteria" id="CTQ73962">
        <property type="protein sequence ID" value="CTQ73962"/>
        <property type="gene ID" value="LAX5112_03709"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018666">
        <property type="entry name" value="DUF2125"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09898">
        <property type="entry name" value="DUF2125"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="16"/>
            <end position="36"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73962.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="349" mass="36860" checksum="A0B51B019AC5F034" modified="2015-12-09" version="1">MSSDTAAGKTPSKRKYLLLTGFIIIVVAGWSGAWAYGRTVLADQLDLQFGRFSEQGTEVTCNDLTIGGYPWRYEIRCDDLKSLDLSGSESAVGGLTAVALVYNPWHVILEAATPAAVSLPLAGVSGELTWETARASARYSTEALGKVDVVVTKPALTVQNPAAEARILSEKAEFHLRPSPETTGAVDGFFSIDGLKVDQLPSLTNPVDARMHLQVLNGAPLLSGADLRSLVLANGGELPVRLVLAEVALGASRFGSRGDLTVNGAGALSGTLTLTLVQPGDMLNSIRPLFPPDSNEFSIVESLLSSLQPTGTDHHGDPAIEIPLLIDNGLMRMGFVTLGRIPPLFQTGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AI97</accession>
    <name>A0A0M7AI97_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">tRNA (Guanosine(18)-2'-O)-methyltransferase</fullName>
            <ecNumber evidence="7">2.1.1.34</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">trmH</name>
        <name evidence="7" type="ORF">LAX5112_04012</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.34" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74865.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673315.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04012"/>
    <dbReference type="EnsemblBacteria" id="CTQ74865">
        <property type="protein sequence ID" value="CTQ74865"/>
        <property type="gene ID" value="LAX5112_04012"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009020">
        <property type="term" value="F:tRNA (guanosine-2'-O-)-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052665">
        <property type="term" value="F:tRNA (uracil-2'-O-)-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1280.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029028">
        <property type="entry name" value="Alpha/beta_knot_MTases"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004384">
        <property type="entry name" value="RNA_MeTrfase_TrmJ/LasT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001537">
        <property type="entry name" value="SpoU_MeTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029026">
        <property type="entry name" value="tRNA_m1G_MTases_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42786">
        <property type="entry name" value="PTHR42786"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00588">
        <property type="entry name" value="SpoU_methylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75217">
        <property type="entry name" value="SSF75217"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 7" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="3 7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="SpoU_methylase" evidence="6">
        <location>
            <begin position="8"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="155"/>
            <end position="181"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007228"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00588"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ74865.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="181" mass="19606" checksum="7A241412E6E41C79" modified="2015-12-09" version="1">MRGYFAVGAEGLSKRMNLGTLMRSAHAFGASFFFTVDAEQKIRRAPKSDTSKSPGHLPTFDWDSVDTMDLPRGCQLVGIELTDESIDLPSFGHPLQAAYVLGPERGSLSPQMLERCDHVVKIPTKFCINVAMAGAIVMYDRHRAMGRYADRAVSSGAPTVEPSKHVSGGPISRTGRIVPGN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIA0</accession>
    <name>A0A0M7AIA0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03784</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74172.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74172">
        <property type="protein sequence ID" value="CTQ74172"/>
        <property type="gene ID" value="LAX5112_03784"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024524">
        <property type="entry name" value="DUF3800"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12686">
        <property type="entry name" value="DUF3800"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ74172.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="218" mass="25582" checksum="A20FE427432B25AB" modified="2015-12-09" version="1">MADKYIFSDEAGCFTFKKVNGASKYFMLCTVVLEDCSISNELLNIKRKLVLNGEPERNKLHATSDSVITRKEVYPIIADYDLSIDCTILEKTKAQPQTRIDDTTFYKYAWYYHFKKIGPIICSKDEKTLITAASIGNKKKRSSFKENVNNVVQQIVPREQWEVSFADSANDPCLWLADYCAWAIQRKWERNEDEFYNMIKPKINSEYDLWERGTRHYY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIJ0</accession>
    <name>A0A0M7AIJ0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase</fullName>
            <ecNumber evidence="9">1.14.13.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">ubiF_2</name>
        <name evidence="9" type="ORF">LAX5112_03737</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="2">Cofactor biosynthesis; ubiquinone biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the UbiH/COQ6 family.</text>
    </comment>
    <dbReference type="EC" id="1.14.13.-" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74040.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673065.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03737"/>
    <dbReference type="EnsemblBacteria" id="CTQ74040">
        <property type="protein sequence ID" value="CTQ74040"/>
        <property type="gene ID" value="LAX5112_03737"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00232"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071949">
        <property type="term" value="F:FAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016709">
        <property type="term" value="F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006744">
        <property type="term" value="P:ubiquinone biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002938">
        <property type="entry name" value="FAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018168">
        <property type="entry name" value="Ubi_Hdrlase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010971">
        <property type="entry name" value="UbiH/COQ6"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01494">
        <property type="entry name" value="FAD_binding_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01988">
        <property type="entry name" value="Ubi-OHases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01304">
        <property type="entry name" value="UBIH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0274">FAD</keyword>
    <keyword evidence="4" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="7" id="KW-0503">Monooxygenase</keyword>
    <keyword evidence="6 9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FAD_binding_3" evidence="8">
        <location>
            <begin position="11"/>
            <end position="324"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004749"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005349"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF01494"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ74040.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="412" mass="45247" checksum="0E2F6EF0E9A670AF" modified="2015-12-09" version="1">MARPKKSDEMYDVVIAGGGYVGLSLALALKQGDQGLKCAVVDPKPMNTLDRDPRASAIAAAASRMLTQLGIWDKISDKGQPINEMIVTDSKLRDAVRPVFLTFDGEATEGEPFATMMPNGVMMPALYKAAKALGTVFFAPNSAATFRNNPDHVDLELNDGKVLKTRLLIAADGVRSKLRDLAGIRTVNWDYKQSGIVTTIKHERPHNGRAEEHFLPAGPFAILPLPGNRSSLVWTEKTSDADRLVRSDDFTFELELERRFGHHLGTLEVDGPRQAYPLGLKLAREFVKSRFALIGDSAHGIHPIAGQGLNLGFKDVAALAEVIIDARRLGQDIGAFDVLERYQRWRRFDTFQMGVVTDVLNRLFSNDIDLLRAARDFGLGLVDRMPSLKSQFIKEASGFAGPVPKLLSGDPI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIL9</accession>
    <name>A0A0M7AIL9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">LprI domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03748</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74070.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673072.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03748"/>
    <dbReference type="EnsemblBacteria" id="CTQ74070">
        <property type="protein sequence ID" value="CTQ74070"/>
        <property type="gene ID" value="LAX5112_03748"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009739">
        <property type="entry name" value="LprI_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07007">
        <property type="entry name" value="LprI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809471" description="LprI domain-containing protein" evidence="1">
        <location>
            <begin position="23"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="domain" description="LprI" evidence="2">
        <location>
            <begin position="37"/>
            <end position="128"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ74070.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="137" mass="15260" checksum="5150243CBC8810D1" modified="2015-12-09" version="1">MRILNQAVLPAVLLGLCVPALADEKIDCGYPLNNSERTYCAEKALDQANEDLTAAYERALEKMTEVDTSLPEHLNGSPEALKAAQEAWTDFRDKDCTAYSFPFRGGTRGNELYRNCMIVMTMQRVDDLNAMVEDYGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIP3</accession>
    <name>A0A0M7AIP3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Putative dienelactone hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">LAX5112_03888</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74517.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03888"/>
    <dbReference type="EnsemblBacteria" id="CTQ74517">
        <property type="protein sequence ID" value="CTQ74517"/>
        <property type="gene ID" value="LAX5112_03888"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003847">
        <property type="term" value="F:1-alkyl-2-acetylglycerophosphocholine esterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008236">
        <property type="term" value="F:serine-type peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016042">
        <property type="term" value="P:lipid catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005065">
        <property type="entry name" value="PAF_acetylhydro-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001375">
        <property type="entry name" value="Peptidase_S9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016986">
        <property type="entry name" value="UCP031982_abhydr"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10272">
        <property type="entry name" value="PTHR10272"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00326">
        <property type="entry name" value="Peptidase_S9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF031982">
        <property type="entry name" value="UCP031982_abhydr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0442">Lipid degradation</keyword>
    <keyword evidence="3" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809680" evidence="4">
        <location>
            <begin position="33"/>
            <end position="361"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_S9" evidence="5">
        <location>
            <begin position="123"/>
            <end position="197"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022963"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00326"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ74517.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="361" mass="39561" checksum="AC479709B0CB9069" modified="2015-12-09" version="1">MTSSFPISPSRHLPMMMALLALTVFPARPAGAAPAETTFSARFGPGVQEFQVQDDQTDRPLAGHIWYPTPTPDHAPRADRSKVWQMAPADPGAEIADGTYPLLVVSHGMFGNTFNQAWLGSELARRGYVVAMVNHPGTSSFLRDPLQAQQLWERPKDLSRLITHLTERSTWRDFIDQSRVSAAGHSLGGFTVMLAGGARFDGDLYDKGCFGDTRIPVVCDILRGWSVAETPEDRRAMEQNLRDSRIRKIISLDLGGAPVLSRSSLSSVAIPVLVLGAGRADMLDQDLESRALASALPKALTVHIELEDAGHFDLMGVCKPEGFAILQEHEPGDEMVCVKGGADRELQHQRILNEILMFLEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJH6</accession>
    <name>A0A0M7AJH6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04182</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75315.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008194232.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04182"/>
    <dbReference type="EnsemblBacteria" id="CTQ75315">
        <property type="protein sequence ID" value="CTQ75315"/>
        <property type="gene ID" value="LAX5112_04182"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046093">
        <property type="entry name" value="DUF6111"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19606">
        <property type="entry name" value="DUF6111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="40"/>
            <end position="61"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75315.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="86" mass="9773" checksum="F8643E946EBE8628" modified="2015-12-09" version="1">MLRIILTQLFLFLLPFACYACYLWLSKKGDNPESWSRGPVAWLTVAGLFLTISGFVAVAQFNRAPEGTQYRPAEFRDGELIPGRFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJM9</accession>
    <name>A0A0M7AJM9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Methylmalonyl-CoA mutase</fullName>
            <ecNumber evidence="7">5.4.99.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">scpA_2</name>
        <name evidence="7" type="ORF">LAX5112_04002</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>adenosylcob(III)alamin</name>
            <dbReference type="ChEBI" id="CHEBI:18408"/>
        </cofactor>
    </comment>
    <dbReference type="EC" id="5.4.99.2" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74847.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673293.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04002"/>
    <dbReference type="EnsemblBacteria" id="CTQ74847">
        <property type="protein sequence ID" value="CTQ74847"/>
        <property type="gene ID" value="LAX5112_04002"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031419">
        <property type="term" value="F:cobalamin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004494">
        <property type="term" value="F:methylmalonyl-CoA mutase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006159">
        <property type="entry name" value="Acid_CoA_mut_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016176">
        <property type="entry name" value="Cbl-dep_enz_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006158">
        <property type="entry name" value="Cobalamin-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036724">
        <property type="entry name" value="Cobalamin-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006099">
        <property type="entry name" value="MeMalonylCoA_mutase_a/b_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006098">
        <property type="entry name" value="MMCoA_mutase_a_cat"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02310">
        <property type="entry name" value="B12-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01642">
        <property type="entry name" value="MM_CoA_mutase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51703">
        <property type="entry name" value="SSF51703"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52242">
        <property type="entry name" value="SSF52242"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00640">
        <property type="entry name" value="acid_CoA_mut_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00641">
        <property type="entry name" value="acid_CoA_mut_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51332">
        <property type="entry name" value="B12_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0846">Cobalamin</keyword>
    <keyword evidence="5" id="KW-0170">Cobalt</keyword>
    <keyword evidence="4 7" id="KW-0413">Isomerase</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="B12-binding" evidence="6">
        <location>
            <begin position="531"/>
            <end position="660"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001922"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022628"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023285"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51332"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ74847.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="665" mass="72150" checksum="11E8F33FF6042E18" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJR7</accession>
    <name>A0A0M7AJR7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Sigma-W factor</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">sigW</name>
        <name evidence="4" type="ORF">LAX5112_03731</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the sigma-70 factor family. ECF subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74023.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03731"/>
    <dbReference type="EnsemblBacteria" id="CTQ74023">
        <property type="protein sequence ID" value="CTQ74023"/>
        <property type="gene ID" value="LAX5112_03731"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016987">
        <property type="term" value="F:sigma factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006352">
        <property type="term" value="P:DNA-templated transcription, initiation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050896">
        <property type="term" value="P:response to stimulus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039425">
        <property type="entry name" value="RNA_pol_sigma-70-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014284">
        <property type="entry name" value="RNA_pol_sigma-70_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007627">
        <property type="entry name" value="RNA_pol_sigma70_r2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013249">
        <property type="entry name" value="RNA_pol_sigma70_r4_t2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013325">
        <property type="entry name" value="RNA_pol_sigma_r2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013324">
        <property type="entry name" value="RNA_pol_sigma_r3/r4-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43133">
        <property type="entry name" value="PTHR43133"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04542">
        <property type="entry name" value="Sigma70_r2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08281">
        <property type="entry name" value="Sigma70_r4_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88659">
        <property type="entry name" value="SSF88659"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88946">
        <property type="entry name" value="SSF88946"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02937">
        <property type="entry name" value="sigma70-ECF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Sigma70_r2" evidence="2">
        <location>
            <begin position="13"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="domain" description="Sigma70_r4_2" evidence="3">
        <location>
            <begin position="104"/>
            <end position="157"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010641"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF04542"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF08281"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ74023.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="180" mass="20750" checksum="2188C6529CA6510D" modified="2015-12-09" version="1">MADEPLKADMIRLIPKLRSFALRLCRNPDQADDLVQTTCERAIRSLDQFDPATRLDSWMFRILQNLYFNMQRDTANRARLFEKAMFDYDDTFDGQRAAVSSLELQQVRRFIEQLDDDNRTVLMMIAIDGRSYKDVAEELQVPIGTVTSRLARARLKLRDWLEARKSPEGASQSASKGVVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJU2</accession>
    <name>A0A0M7AJU2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="14">CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase</fullName>
            <ecNumber evidence="14">2.7.8.5</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="14" type="primary">pgsA</name>
        <name evidence="14" type="ORF">LAX5112_04127</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">CECT 5112</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="11">Phospholipid metabolism.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="12">Belongs to the CDP-alcohol phosphatidyltransferase class-I family.</text>
    </comment>
    <dbReference type="EC" id="2.7.8.5" evidence="14"/>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75149.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673388.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04127"/>
    <dbReference type="EnsemblBacteria" id="CTQ75149">
        <property type="protein sequence ID" value="CTQ75149"/>
        <property type="gene ID" value="LAX5112_04127"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00051">
        <property type="reaction ID" value="UER00462"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008444">
        <property type="term" value="F:CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008654">
        <property type="term" value="P:phospholipid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.1760">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000462">
        <property type="entry name" value="CDP-OH_P_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043130">
        <property type="entry name" value="CDP-OH_PTrfase_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004570">
        <property type="entry name" value="Phosphatidylglycerol_P_synth"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01066">
        <property type="entry name" value="CDP-OH_P_transf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000847">
        <property type="entry name" value="Phos_ph_gly_syn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00560">
        <property type="entry name" value="pgsA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00379">
        <property type="entry name" value="CDP_ALCOHOL_P_TRANSF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="6" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="9" id="KW-0464">Manganese</keyword>
    <keyword evidence="7 13" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-0594">Phospholipid biosynthesis</keyword>
    <keyword evidence="10" id="KW-1208">Phospholipid metabolism</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 12 14" id="KW-0808">Transferase</keyword>
    <keyword evidence="4 13" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 13" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="37"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="77"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="153"/>
            <end position="174"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023209"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023264"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00025707"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU003750"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="CTQ75149.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="190" mass="20617" checksum="D5F33A2C6B88A382" modified="2015-12-09" version="1">MKNNVAFSLPNILTYGRILAVPAVAFCFYFEGTTPRWIAVGLFVLAAITDFFDGYLARAWQQQSALGRMLDPIADKLLVSVCLLMLAADGTIGGWSIIAALIILCREILVSGLREFLAELQVSVPVTQLAKWKTTVQMVAIGLLLAGPAGDLIFPYTSLLGLTALWVAAVLTLYTGYDYFRAGIGHLITE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AK90</accession>
    <name>A0A0M7AK90_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Ribosomal protein L11 methyltransferase</fullName>
            <ecNumber evidence="1">2.1.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">prmA_2</name>
        <name evidence="1" type="ORF">LAX5112_03984</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.1.1.-" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74816.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673312.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03984"/>
    <dbReference type="EnsemblBacteria" id="CTQ74816">
        <property type="protein sequence ID" value="CTQ74816"/>
        <property type="gene ID" value="LAX5112_03984"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="1" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ74816.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="221" mass="24468" checksum="E9B3B667437BEC9E" modified="2015-12-09" version="1">MARITDPEKFIREETRIRPVPHAEEISLHVADEAMDLWQKTEEELGHLGLAPPFWAFAWAGGQGLARYVLDHPEVVYQKRVLDFACGSGLMAIAAKMAGAGSCHGVDIDPFAIAAARLNAELNCVVATFAEGDITRSSVPDVDVVFCGDVFYDRHMADEVLIFLDKLMAAGIEVYVGDPGRSYLPNERLKELCEYQVPVVGQLEDNEIKKTRVYKVAENQS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKH4</accession>
    <name>A0A0M7AKH4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Tryptophan synthase beta chain</fullName>
            <ecNumber evidence="11">4.2.1.20</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11 13" type="primary">trpB</name>
        <name evidence="13" type="ORF">LAX5112_03823</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11">The beta subunit is responsible for the synthesis of L-tryptophan from indole and L-serine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 11">
            <text>(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate + L-serine = D-glyceraldehyde 3-phosphate + H2O + L-tryptophan</text>
            <dbReference type="Rhea" id="RHEA:10532"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:33384"/>
            <dbReference type="ChEBI" id="CHEBI:57912"/>
            <dbReference type="ChEBI" id="CHEBI:58866"/>
            <dbReference type="ChEBI" id="CHEBI:59776"/>
            <dbReference type="EC" id="4.2.1.20"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 11">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="3 11">Amino-acid biosynthesis; L-tryptophan biosynthesis; L-tryptophan from chorismate: step 5/5.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5 11">Tetramer of two alpha and two beta chains.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4 11">Belongs to the TrpB family.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.20" evidence="11"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74283.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03823"/>
    <dbReference type="EnsemblBacteria" id="CTQ74283">
        <property type="protein sequence ID" value="CTQ74283"/>
        <property type="gene ID" value="LAX5112_03823"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00035">
        <property type="reaction ID" value="UER00044"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004834">
        <property type="term" value="F:tryptophan synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd06446">
        <property type="entry name" value="Trp-synth_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1100">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00133">
        <property type="entry name" value="Trp_synth_beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001926">
        <property type="entry name" value="PLP-dep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006653">
        <property type="entry name" value="Trp_synth_b_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006654">
        <property type="entry name" value="Trp_synth_beta"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023026">
        <property type="entry name" value="Trp_synth_beta/beta-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036052">
        <property type="entry name" value="Trypto_synt_PLP_dependent"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00291">
        <property type="entry name" value="PALP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001413">
        <property type="entry name" value="Trp_syn_beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53686">
        <property type="entry name" value="SSF53686"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00263">
        <property type="entry name" value="trpB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00168">
        <property type="entry name" value="TRP_SYNTHASE_BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 11" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="9 11" id="KW-0057">Aromatic amino acid biosynthesis</keyword>
    <keyword evidence="10 11 13" id="KW-0456">Lyase</keyword>
    <keyword evidence="8 11" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 11" id="KW-0822">Tryptophan biosynthesis</keyword>
    <feature type="domain" description="PALP" evidence="12">
        <location>
            <begin position="62"/>
            <end position="387"/>
        </location>
    </feature>
    <feature type="modified residue" description="N6-(pyridoxal phosphate)lysine" evidence="11">
        <location>
            <position position="97"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000003"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004733"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00009982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00011270"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022822"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00133"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF00291"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="CTQ74283.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="404" mass="43759" checksum="9BED9FB05CF289E7" modified="2015-12-09" version="1">MNDMANSIRTGPDDRGHFGIFGGRYVAETLMPLILDLEAHYKAAKNDPDFLAEVKNLNTHYTGRPSPLYFAERLTEELGGAKIYFKRDELNHTGSHKINNCLGQILLAKRMGKTRIIAETGAGQHGVATATVCARFGLPCVVYMGATDVERQKPNVFRMKLLGAEIVPVTAGAGTLKDAMNEALRDWVTNVDDTYYLIGTAAGPHPYPELVRDFQSVIGKELREQILEAEGRLPDVLVAAVGGGSNAIGLFHPFLDDKDVKIVGVEAGGRGLTGEEHCASLNAGKPGVLHGNRTYLMQDDDGQILEGHSISAGLDYPGIGPEHSWLKEIGRAEYIPIMDDEALAAFQVLTRVEGIIPALEPAHALAQVAKMAPQMDKDQIIVMNLCGRGDKDVFAVGEMLGFDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKI4</accession>
    <name>A0A0M7AKI4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Peptidyl-prolyl cis-trans isomerase</fullName>
            <shortName evidence="1">PPIase</shortName>
            <ecNumber evidence="1">5.2.1.8</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ppiB_2</name>
        <name evidence="3" type="ORF">LAX5112_04034</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>[protein]-peptidylproline (omega=180) = [protein]-peptidylproline (omega=0)</text>
            <dbReference type="Rhea" id="RHEA:16237"/>
            <dbReference type="Rhea" id="RHEA-COMP:10747"/>
            <dbReference type="Rhea" id="RHEA-COMP:10748"/>
            <dbReference type="ChEBI" id="CHEBI:83833"/>
            <dbReference type="ChEBI" id="CHEBI:83834"/>
            <dbReference type="EC" id="5.2.1.8"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the cyclophilin-type PPIase family.</text>
    </comment>
    <dbReference type="EC" id="5.2.1.8" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ74916.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008194791.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04034"/>
    <dbReference type="EnsemblBacteria" id="CTQ74916">
        <property type="protein sequence ID" value="CTQ74916"/>
        <property type="gene ID" value="LAX5112_04034"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003755">
        <property type="term" value="F:peptidyl-prolyl cis-trans isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000413">
        <property type="term" value="P:protein peptidyl-prolyl isomerization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.100.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029000">
        <property type="entry name" value="Cyclophilin-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002130">
        <property type="entry name" value="Cyclophilin-type_PPIase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044666">
        <property type="entry name" value="Cyclophilin_A-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45625">
        <property type="entry name" value="PTHR45625"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00160">
        <property type="entry name" value="Pro_isomerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00153">
        <property type="entry name" value="CSAPPISMRASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50891">
        <property type="entry name" value="SSF50891"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50072">
        <property type="entry name" value="CSA_PPIASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 3" id="KW-0413">Isomerase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0697">Rotamase</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5006517744" description="Peptidyl-prolyl cis-trans isomerase" evidence="1">
        <location>
            <begin position="22"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="domain" description="PPIase cyclophilin-type" evidence="2">
        <location>
            <begin position="38"/>
            <end position="178"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU363019"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ74916.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="178" mass="19229" checksum="A43036279CC2A3FE" modified="2015-12-09" version="1">MSRIFTALAVLASLIFMPAMAVAQQDPENTLYLDLKDGRVVIELRPDLAPNHVARVKELTRDGFYDGIVFHRVIDGFMAQTGDPTGTGRGGSDKPDVNAEFSSAPFERGTLGMARSSSPNSANSQFFIMFADGDWLNGQYTVFGKVVEGMDLVDNITKGEPPANPDKIIKMQVAADAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AM28</accession>
    <name>A0A0M7AM28_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">FecR protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_04505</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000025">
        <property type="protein sequence ID" value="CTQ76185.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04505"/>
    <dbReference type="EnsemblBacteria" id="CTQ76185">
        <property type="protein sequence ID" value="CTQ76185"/>
        <property type="gene ID" value="LAX5112_04505"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006860">
        <property type="entry name" value="FecR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011250">
        <property type="entry name" value="OMP/PagP_b-brl"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04773">
        <property type="entry name" value="FecR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56925">
        <property type="entry name" value="SSF56925"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809534" evidence="2">
        <location>
            <begin position="35"/>
            <end position="1065"/>
        </location>
    </feature>
    <feature type="domain" description="FecR" evidence="3">
        <location>
            <begin position="70"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="194"/>
            <end position="321"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="194"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="262"/>
            <end position="289"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF04773"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ76185.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="1065" mass="108950" checksum="16C678C3402CD609" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMH3</accession>
    <name>A0A0M7AMH3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Inosose dehydratase</fullName>
            <ecNumber evidence="2">4.2.1.44</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">iolE_1</name>
        <name evidence="2" type="ORF">LAX5112_04561</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="4.2.1.44" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000026">
        <property type="protein sequence ID" value="CTQ76338.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673755.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000026.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04561"/>
    <dbReference type="EnsemblBacteria" id="CTQ76338">
        <property type="protein sequence ID" value="CTQ76338"/>
        <property type="gene ID" value="LAX5112_04561"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050114">
        <property type="term" value="F:myo-inosose-2 dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036237">
        <property type="entry name" value="Xyl_isomerase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013022">
        <property type="entry name" value="Xyl_isomerase-like_TIM-brl"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01261">
        <property type="entry name" value="AP_endonuc_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51658">
        <property type="entry name" value="SSF51658"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AP_endonuc_2" evidence="1">
        <location>
            <begin position="30"/>
            <end position="293"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01261"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76338.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="297" mass="32836" checksum="A6729DA7D9818536" modified="2015-12-09" version="1">MSIRIGNAPCSWGVEFPDDPRNPAWRTVLQECSGAGYKGIELGPVGFMPEDPAVLSEALAQYDLELIGGVVFRPFHDPDAWENVLDGTHRTAKALVAHGAQHMVLIDSISPRRAPTAGRPEEAEQMNAAEWAAYRDHIAEAAKIGTEDYGLTVGIHAHAAGFMDFEPELERLLNEVDEKYLKICFDTGHHSYAGFDPVAFMERNIGRISYMHFKDIDPKVKADVVANRTGFYDACGQGIFCNLGDGDVDFPKVRQILLDSGFQGWCTVEQDCDPTLDVSPIDDARANREYLESIGFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMM1</accession>
    <name>A0A0M7AMM1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Neu5Ac permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">siaT_27</name>
        <name evidence="5" type="ORF">LAX5112_04578</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000026">
        <property type="protein sequence ID" value="CTQ76388.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008190067.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000026.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04578"/>
    <dbReference type="EnsemblBacteria" id="CTQ76388">
        <property type="protein sequence ID" value="CTQ76388"/>
        <property type="gene ID" value="LAX5112_04578"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010656">
        <property type="entry name" value="DctM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004681">
        <property type="entry name" value="TRAP_DctM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33362">
        <property type="entry name" value="PTHR33362"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06808">
        <property type="entry name" value="DctM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006066">
        <property type="entry name" value="HI0050"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00786">
        <property type="entry name" value="dctM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="39"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="77"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="136"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="171"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="215"/>
            <end position="237"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="243"/>
            <end position="261"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="273"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="315"/>
            <end position="340"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="352"/>
            <end position="372"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="402"/>
            <end position="426"/>
        </location>
    </feature>
    <feature type="domain" description="DctM" evidence="4">
        <location>
            <begin position="8"/>
            <end position="416"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF06808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ76388.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="427" mass="44916" checksum="EABD6109AC3D6361" modified="2015-12-09" version="1">MILLFVVAVFLSTVFLGIPLVWAILITAVLPIIVFDLGYPLQALFLNFIGGVEPNHFLAIPLFIVAGEMMSRGGVGLRIIGFARAAFGFMAGGLGMVVVGASMIFGGISGSAIADSAAIGSVMIKNMSREGYDKAFAAGLVAAAGTIGIIIPPSIPMLIYGFVGNVSVADLFIGGMVPGILFGASFMGVCYYVGKTTNCDPGGRTTTLKELTSSFIGTAPALFMPVLILGGIFTGWVTPTESAALAVIYGLIVTTVVYQDFNIKDLPRLLIDSFVTSSVVMVVIGATTVLGWLITLEQMPQILVGFVQEFSTGPWMFLLLVNIVLLVLGLVLDPVPAILLTAPLFLPTAKIFGVDPVHLGVIMTCNVAVGLFTPPVGATLYVASRISGVGVLSIARRMLHLYLAAIFALLLVTYFPIFTMGMVGLFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMN9</accession>
    <name>A0A0M7AMN9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Alcohol dehydrogenase</fullName>
            <ecNumber evidence="2">1.1.1.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04011</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.1.1.1" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74864.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673301.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04011"/>
    <dbReference type="EnsemblBacteria" id="CTQ74864">
        <property type="protein sequence ID" value="CTQ74864"/>
        <property type="gene ID" value="LAX5112_04011"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004022">
        <property type="term" value="F:alcohol dehydrogenase (NAD+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013149">
        <property type="entry name" value="ADH-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013154">
        <property type="entry name" value="ADH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011032">
        <property type="entry name" value="GroES-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020843">
        <property type="entry name" value="PKS_ER"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08240">
        <property type="entry name" value="ADH_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00107">
        <property type="entry name" value="ADH_zinc_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00829">
        <property type="entry name" value="PKS_ER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50129">
        <property type="entry name" value="SSF50129"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PKS_ER" evidence="1">
        <location>
            <begin position="10"/>
            <end position="322"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74864.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="324" mass="34041" checksum="A9DA458077C24390" modified="2015-12-09" version="1">MKACICPSYGPPSNLVIEELADPVAAAGEVVVAVKACALNFFDTLIIQGKYQFKAEPPFSPSAEFAGIVEQVGDGVTEFAVGDRVMGYMVFGAAREKVVITPDALVKMPDDISFETAAGLTVTYGTTLHAFRDRADLKAGEIVAVLGASGGVGQAAVEIASIIGAKVIACASSEEKLAFAKSLGADELVDYSKVSLKDTLKELTGGAGVDVVYDPVGGDLAEQALRATAWEGRFLVIGFASGDIPKIPLNLTLLKGCDIRGVFWGAAIKKDPDGHKANMSQLLTWVSEGKLKPHIHAVYPFEKIGTALDEIAARKVFGKVILVP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANY7</accession>
    <name>A0A0M7ANY7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Putative HTH-type transcriptional regulator YdfH</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ydfH_6</name>
        <name evidence="5" type="ORF">LAX5112_04574</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000026">
        <property type="protein sequence ID" value="CTQ76377.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673767.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000026.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04574"/>
    <dbReference type="EnsemblBacteria" id="CTQ76377">
        <property type="protein sequence ID" value="CTQ76377"/>
        <property type="gene ID" value="LAX5112_04574"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07377">
        <property type="entry name" value="WHTH_GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.530">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011711">
        <property type="entry name" value="GntR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008920">
        <property type="entry name" value="TF_FadR/GntR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000524">
        <property type="entry name" value="Tscrpt_reg_HTH_GntR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07729">
        <property type="entry name" value="FCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00392">
        <property type="entry name" value="GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00895">
        <property type="entry name" value="FCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00345">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48008">
        <property type="entry name" value="SSF48008"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50949">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH gntR-type" evidence="4">
        <location>
            <begin position="8"/>
            <end position="75"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ76377.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="224" mass="25286" checksum="1AFD4DB52E7CE854" modified="2015-12-09" version="1">MLDPSKPKTITTQAMEKIRQLIFDGELAAGSDHLESELAGRLGMSRTPVREATLMLAQQGLLEVRPRKGVRIATLSLTDMEEIYAVLTELESLAAEEAARKHYSKADLADLKASIEAMDRALNDEDRDAWAEADDAFHTELVRLGGNSRVQNIVSMMANQVRRARAMTLYIRPLPIKSNQDHRAVYDAIRTGDAASAREQHRLHRRHAREVLIDLLKKHRLFQL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AP51</accession>
    <name>A0A0M7AP51_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Inner membrane protein YiaW</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yiaW_2</name>
        <name evidence="2" type="ORF">LAX5112_04667</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000028">
        <property type="protein sequence ID" value="CTQ76669.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673851.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000028.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04667"/>
    <dbReference type="EnsemblBacteria" id="CTQ76669">
        <property type="protein sequence ID" value="CTQ76669"/>
        <property type="gene ID" value="LAX5112_04667"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011223">
        <property type="entry name" value="UCP028770"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11742">
        <property type="entry name" value="DUF3302"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF028770">
        <property type="entry name" value="UCP028770"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="46"/>
            <end position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76669.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="124" mass="13448" checksum="83BD681FC2AAEC73" modified="2015-12-09" version="1">MNWDYFTFGIMGVILLLIVFLIFFFGDAPGKIARERGHPQADAINVCAWIGLAAGGVGWVVALVWAYTRPVGITVTPKLEPANAETMGAQELKAEITNLKGRLEELEHHLEAQTGPKAKQGDAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQU5</accession>
    <name>A0A0M7AQU5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04736</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000029">
        <property type="protein sequence ID" value="CTQ76881.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04736"/>
    <dbReference type="EnsemblBacteria" id="CTQ76881">
        <property type="protein sequence ID" value="CTQ76881"/>
        <property type="gene ID" value="LAX5112_04736"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022254">
        <property type="entry name" value="DUF3775"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12616">
        <property type="entry name" value="DUF3775"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="62"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="63"/>
            <end position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76881.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="156" mass="16830" checksum="67BB07895F041819" modified="2015-12-09" version="1">MAIANGQKWIDKEVSSSEAAMDIDLSLSADTVRMLAQKARAVAETSADTFEDGHEGDVEFDADTLEEAHGHDGLAEEESDNLSDEELRELLEDLNVDEAAELVAITWIGRGDFEAEDFSQAVQEAKDRAVGSTASYLLGMPMLADHLEAGLDSLSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AR71</accession>
    <name>A0A0M7AR71_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Pirin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">LAX5112_04897</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the pirin family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000034">
        <property type="protein sequence ID" value="CTQ77399.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77399">
        <property type="protein sequence ID" value="CTQ77399"/>
        <property type="gene ID" value="LAX5112_04897"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012093">
        <property type="entry name" value="Pirin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008778">
        <property type="entry name" value="Pirin_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003829">
        <property type="entry name" value="Pirin_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13903">
        <property type="entry name" value="PTHR13903"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02678">
        <property type="entry name" value="Pirin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05726">
        <property type="entry name" value="Pirin_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006232">
        <property type="entry name" value="Pirin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Pirin" evidence="3">
        <location>
            <begin position="64"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="domain" description="Pirin_C" evidence="4">
        <location>
            <begin position="203"/>
            <end position="305"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008416"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU003457"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF02678"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF05726"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ77399.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="309" mass="33287" checksum="5E3668EBEDC48743" modified="2015-12-09" version="1">MTDFLLIVSLISSMQQKRETYMTTQLIDTLAGAPRETHAQSDGQKLTIGDGFVAQSYQHTDFQGLMDPLIMVDHFVATKPTFGPHAHAGLSAVTVMFEDSEGAFHNRDSLGNDLELAPGDLYWFKAARGALHDEAPRPDARTHALQVFVNLPAENRHDAPFAFHLPAKDIPKLAGDRSTARLILGEGNGVTGRVAPDVPLTLLDIYMQAGGQFTHSGNSDQHAWILAITGTSTVTWNAGSANLKPGKAIACAGASDISFTSEEGAHAVLFRGHPLRQAFVQRGPFAMDKAAELDDVEADYRAGRLGSID</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARF7</accession>
    <name>A0A0M7ARF7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">3-keto-5-aminohexanoate cleavage enzyme</fullName>
            <ecNumber evidence="1">2.-.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">kce_5</name>
        <name evidence="1" type="ORF">LAX5112_04799</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.-.-.-" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000031">
        <property type="protein sequence ID" value="CTQ77091.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673960.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000031.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04799"/>
    <dbReference type="EnsemblBacteria" id="CTQ77091">
        <property type="protein sequence ID" value="CTQ77091"/>
        <property type="gene ID" value="LAX5112_04799"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019475">
        <property type="term" value="P:L-lysine catabolic process to acetate"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008567">
        <property type="entry name" value="KCE_family"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37418">
        <property type="entry name" value="PTHR37418"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05853">
        <property type="entry name" value="BKACE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ77091.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="269" mass="29678" checksum="B9D8A71EDBC0C461" modified="2015-12-09" version="1">MSPDTKSQALPLIMVAPNGARRTKVDHPGLPMSITETVETAVACFEAGAGAIHAHVRDETGAHVLDKDLYQALLSELNAALPQMQVQITTEAVGKYTPEDQRKLVQELRPSLVSIAVREMVPDDGTDTAAEFYSWALKEGISVQHILYSAEDLDRFFDFVENGSIPGITHQVLLVLGRYADNQESAPEDLHPFLDRMKARRSDHEIDWGVCAFGHRETECLVYAIENGGKARIGFENGLWNRDGAVAKDNADRVRDLVSALEEKNISVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARJ0</accession>
    <name>A0A0M7ARJ0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">2-deoxystreptamine glucosyltransferase</fullName>
            <ecNumber evidence="2">2.4.1.284</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">kanF_2</name>
        <name evidence="2" type="ORF">LAX5112_04785</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.4.1.284" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000030">
        <property type="protein sequence ID" value="CTQ77036.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673943.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000030.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77036">
        <property type="protein sequence ID" value="CTQ77036"/>
        <property type="gene ID" value="LAX5112_04785"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102318">
        <property type="term" value="F:2-deoxystreptamine glucosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001296">
        <property type="entry name" value="Glyco_trans_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00534">
        <property type="entry name" value="Glycos_transf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glycos_transf_1" evidence="1">
        <location>
            <begin position="234"/>
            <end position="391"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00534"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77036.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="414" mass="45995" checksum="5E360CF76C18DDC9" modified="2015-12-09" version="1">MNGSAEQRGGRVLFVTAVRLRRGPRGLQLDDQTCAGLARWAESFGHVTYMGIEQPADLEDDTTVTWVDIADLDCRDRLTVVALPFAYKIGRFFKDYTSTRQVLGEEIAKADHLCFTLGYMFGDWAAVAALEAIRQNRDYAVWFDRVEHDVIRRTLPAIPLKRRIKEVVTLPVMVRYHHHLIRHSKLGLFQGQDTLKAYADYSDNPHCVYDVHTQSSDLINAAALEEKTERVQSGAPLKILYVGRASEMKGPLDWVDAIATAAQTGVPLQAKWIGDGPLLADMKQKISALELEDQIELPGFSSDREAILAEMRDADLFVYCHKTQESPRCLIEALVSGAPIVGYQSSYSDDLVSHNGGGAGTPLNDPVALSATIQDLHENRGKLVQLIRAAAADGTRFDEQTLYAHRAGLIREYA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARM6</accession>
    <name>A0A0M7ARM6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Biotin transporter</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">bioY</name>
        <name evidence="4" type="ORF">LAX5112_04790</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the BioY family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000031">
        <property type="protein sequence ID" value="CTQ77066.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673954.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000031.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04790"/>
    <dbReference type="EnsemblBacteria" id="CTQ77066">
        <property type="protein sequence ID" value="CTQ77066"/>
        <property type="gene ID" value="LAX5112_04790"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015225">
        <property type="term" value="F:biotin transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003784">
        <property type="entry name" value="BioY"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34295">
        <property type="entry name" value="PTHR34295"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02632">
        <property type="entry name" value="BioY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF016661">
        <property type="entry name" value="BioY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="2 3" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="6"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="42"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="79"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="110"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="152"/>
            <end position="173"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRNR" id="PIRNR016661"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ77066.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="184" mass="18129" checksum="D05A87B2167C5E16" modified="2015-12-09" version="1">MTDRSLVHVAFYAALIAVLGLLPPVAIPALGGVPITAQTLGVMLAGIMLGPVRGGLAVLLFLFLVALGAPFLSGGRGGLGVFAGPSVGFLIGWPVGAFVAGLIMRVTTNANVLISAAVAGAVGGILVVYAFGIPGISFMTGLSLPKAAMGSAVYIPGDLVKVAIAAVIAQTIARGLPGAVLSRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AS66</accession>
    <name>A0A0M7AS66_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Serralysin</fullName>
            <ecNumber evidence="4">3.4.24.40</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_04927</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
        </cofactor>
    </comment>
    <dbReference type="EC" id="3.4.24.40" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000035">
        <property type="protein sequence ID" value="CTQ77497.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674070.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000035.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04927"/>
    <dbReference type="EnsemblBacteria" id="CTQ77497">
        <property type="protein sequence ID" value="CTQ77497"/>
        <property type="gene ID" value="LAX5112_04927"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005615">
        <property type="term" value="C:extracellular space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.150.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018511">
        <property type="entry name" value="Hemolysin-typ_Ca-bd_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001343">
        <property type="entry name" value="Hemolysn_Ca-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013858">
        <property type="entry name" value="Peptidase_M10B_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011049">
        <property type="entry name" value="Serralysin-like_metalloprot_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00353">
        <property type="entry name" value="HemolysinCabind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08548">
        <property type="entry name" value="Peptidase_M10_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51120">
        <property type="entry name" value="SSF51120"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00330">
        <property type="entry name" value="HEMOLYSIN_CALCIUM"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidase_M10_C" evidence="3">
        <location>
            <begin position="336"/>
            <end position="413"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="86"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="99"/>
            <end position="118"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001913"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF08548"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ77497.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="427" mass="43101" checksum="9AE80C88D3692D49" modified="2015-12-09" version="1">MTIGTEALSENIFLLSEEEQTEVNSILDGFEVDENGNLVGSGSPSGGPSGDVIPGVEPEQVVYEVIVPGEDVGTLSDDSNEGIFIQGGGDREIDASSRTEDTTIIGGEGSEDVSTGTGNDQLVMGGGNDNVRIGGGENNILLGDGDDVADATGGSSAASEAQGGASAAAADAATPSYFDSDQYLRDNADVANAVASGGFSSAYEHFTNHGLGEGRSPNANFDNAYYLSQNADVAAAVESGVFASGLEHFILFGQFEGRQPSAEITIEKYLDANPDVEAAVSAGITDAFAHAFQFGGTEGRATSAQDTIDGGAGNDTIRGGLGDDTLIGGTGNDIIDGGADDDIMTGGEGEDTFVFGASSGIDRITDFEAGVDKLDITALDTTAADLVTGVTSDSDGNAVVTFSSGNTVTLIGVSADSVNDGFFSDNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AV00</accession>
    <name>A0A0M7AV00_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Helix-turn-helix domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04979</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000037">
        <property type="protein sequence ID" value="CTQ77613.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674113.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000037.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04979"/>
    <dbReference type="EnsemblBacteria" id="CTQ77613">
        <property type="protein sequence ID" value="CTQ77613"/>
        <property type="gene ID" value="LAX5112_04979"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001845">
        <property type="entry name" value="HTH_ArsR_DNA-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00778">
        <property type="entry name" value="HTHARSR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00418">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50987">
        <property type="entry name" value="HTH_ARSR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH arsR-type" evidence="1">
        <location>
            <begin position="1"/>
            <end position="95"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50987"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77613.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="110" mass="11817" checksum="A8627BE538D257F9" modified="2015-12-09" version="1">MVLEEAAQGFAALGSEARLQVLLTLVRAGRDGLSVGDIQTRTGMAASTLAHHLKFLASADLVVQEKDGRSVINRAAFERLELLAGYILKECCAEEDKSFVLGVERKAAND</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZM00</accession>
    <name>A0A0M6ZM00_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">LIV-I protein H</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">livH_1</name>
        <name evidence="7" type="ORF">LAX5112_00068</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63795.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008195977.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00068"/>
    <dbReference type="EnsemblBacteria" id="CTQ63795">
        <property type="protein sequence ID" value="CTQ63795"/>
        <property type="gene ID" value="LAX5112_00068"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001851">
        <property type="entry name" value="ABC_transp_permease"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02653">
        <property type="entry name" value="BPD_transp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="15"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="42"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="98"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="190"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="237"/>
            <end position="258"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="270"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="307"/>
            <end position="328"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ63795.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="343" mass="36998" checksum="2F9BF203A0C7E1C5" modified="2015-12-09" version="1">MDAILLQILNGLDKGSAYALIALGLTLIFGTLGVVNFAHGALFMIGAFCAVTLNRLLSVSFTTIDDTRTDFLGNPLKVETPYVEAWFGPEMGGAIIDWSVPLAILFSIPIMALVGLFMERGLIKYFYKRPHADQILVTFGLAIVLQEIIKYFYGANPIPTPAPEVFAGSFDFGALIGMDPNIIIYPYWRIVYFLFATVIIGGVFAFLQFTTFGMVVRAGMADRQTVGLLGIDIDRRFTVMFALAAIVAGLAGVMYAPINSPNYHMGMDFLVLSFVVVVVGGMGSLPGAVAAGFLLGILESFASMAQVVALLPGINQIIIYLVAIVILLTRPRGLLGRKGVMES</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZNI6</accession>
    <name>A0A0M6ZNI6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Peptidyl-dipeptidase dcp</fullName>
            <ecNumber evidence="9">3.4.15.5</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">dcp</name>
        <name evidence="9" type="ORF">LAX5112_00064</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="7">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="7">Binds 1 zinc ion.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 7">Belongs to the peptidase M3 family.</text>
    </comment>
    <dbReference type="EC" id="3.4.15.5" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63782.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670119.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00064"/>
    <dbReference type="EnsemblBacteria" id="CTQ63782">
        <property type="protein sequence ID" value="CTQ63782"/>
        <property type="gene ID" value="LAX5112_00064"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004180">
        <property type="term" value="F:carboxypeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004222">
        <property type="term" value="F:metalloendopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06456">
        <property type="entry name" value="M3A_DCP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1370.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.390.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034005">
        <property type="entry name" value="M3A_DCP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024079">
        <property type="entry name" value="MetalloPept_cat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024077">
        <property type="entry name" value="Neurolysin/TOP_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045090">
        <property type="entry name" value="Pept_M3A_M3B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001567">
        <property type="entry name" value="Pept_M3A_M3B_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43660">
        <property type="entry name" value="PTHR43660"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01432">
        <property type="entry name" value="Peptidase_M3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0121">Carboxypeptidase</keyword>
    <keyword evidence="4 7 9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3 7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6 7" id="KW-0482">Metalloprotease</keyword>
    <keyword evidence="2 7" id="KW-0645">Protease</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 7" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Peptidase_M3" evidence="8">
        <location>
            <begin position="229"/>
            <end position="677"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006040"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003435"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF01432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ63782.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="681" mass="75696" checksum="ED859776808E7432" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZP55</accession>
    <name>A0A0M6ZP55_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Putative metal chaperone YciC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">yciC_1</name>
        <name evidence="4" type="ORF">LAX5112_00127</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63956.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670153.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00127"/>
    <dbReference type="EnsemblBacteria" id="CTQ63956">
        <property type="protein sequence ID" value="CTQ63956"/>
        <property type="gene ID" value="LAX5112_00127"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009236">
        <property type="term" value="P:cobalamin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012824">
        <property type="entry name" value="Cbl_biosynth_CobW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011629">
        <property type="entry name" value="Cbl_biosynth_CobW-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003495">
        <property type="entry name" value="CobW/HypB/UreG_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02492">
        <property type="entry name" value="cobW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07683">
        <property type="entry name" value="CobW_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02475">
        <property type="entry name" value="CobW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="cobW" evidence="2">
        <location>
            <begin position="13"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="domain" description="CobW C-terminal" evidence="3">
        <location>
            <begin position="297"/>
            <end position="363"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="237"/>
            <end position="278"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02492"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF07683"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ63956.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="371" mass="39432" checksum="CFB40F94FD4DC436" modified="2015-12-09" version="1">MTSSTLKPGQKIPATIVTGFLGAGKTTLIRNLLQNAGGKRIALIVNEFGDMGFDGSLVNGCADPSCSAEEVVELTNGCICCTVADDFLPTMEMLLARENPPEHIVIETSGLALPQPLVRAFSWPSVKPKVTVDGVVTVLDAAALAEGRIALDEAALEAQRAADEALDHESPVEELFQDQLRCADLVVLNKADLVAGDILAGVQAKIAAEVRPAVHIIASEKGTLPIEILLGRGSAAEDDMASRHEHHHHHHDDDHHHDHDDHHHDHDHHHDHHHHDDFESHVIEAPVFASLKEAEAQVLQAMALKGVLRIKGAVQVDGKAAPAMVQAVGPRVETWFASGAESAGKLVVIGLKGFDLGAVRGALSGLAEAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPE1</accession>
    <name>A0A0M6ZPE1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">FAD assembly factor SdhE</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_00220</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the SdhE FAD assembly factor family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64217.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670217.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00220"/>
    <dbReference type="EnsemblBacteria" id="CTQ64217">
        <property type="protein sequence ID" value="CTQ64217"/>
        <property type="gene ID" value="LAX5112_00220"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.250">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005631">
        <property type="entry name" value="SDH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036714">
        <property type="entry name" value="SDH_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03937">
        <property type="entry name" value="Sdh5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF109910">
        <property type="entry name" value="SSF109910"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0143">Chaperone</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008571"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00019418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ64217.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="105" mass="12048" checksum="25E7B05F16069531" modified="2015-12-09" version="1">MSDHPSATNDNVTGSRDARRKKILFRCWHRGMKEMDLLLGGFANAKIDELNEDELRELEHLLTAHDQDLYAWMTGRKPLPAEWDGPLYRRIIAYHEAAGPAGFVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPU5</accession>
    <name>A0A0M6ZPU5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative glucosyl-3-phosphoglycerate synthase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00398</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64775.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670375.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00398"/>
    <dbReference type="EnsemblBacteria" id="CTQ64775">
        <property type="protein sequence ID" value="CTQ64775"/>
        <property type="gene ID" value="LAX5112_00398"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001173">
        <property type="entry name" value="Glyco_trans_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00535">
        <property type="entry name" value="Glycos_transf_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glyco_trans_2-like" evidence="1">
        <location>
            <begin position="8"/>
            <end position="120"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00535"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64775.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="262" mass="30284" checksum="7D78EE9797B10BBE" modified="2015-12-09" version="1">MTQRLPLSAFIIAKNEADRIPAAIKSVIGWVDEVIVIDSGSEDETVAVAESLGARVVFNEWPGYGLQKRFGEDQCRNDWLLNLDADEEITPALAAEIKTKFDDQSYMASDAWRIMIRDTFPHETEPASWAYGYNQIRLYDRRKGRFSASTVHDTVRPQEGATLGDLKGIMAHRSDRSLEFSVGKYNRYSDMQVQDMLDRGRKIPRYRLLTEFPVSFLKGYFVRKYRKYGWWGFILAMNYAHGRFLRVAKAYEAELLRKTGRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQH0</accession>
    <name>A0A0M6ZQH0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">HTH-type transcriptional regulator MhqR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">mhqR_1</name>
        <name evidence="3" type="ORF">LAX5112_00028</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63673.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670091.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ63673">
        <property type="protein sequence ID" value="CTQ63673"/>
        <property type="gene ID" value="LAX5112_00028"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000835">
        <property type="entry name" value="HTH_MarR-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01047">
        <property type="entry name" value="MarR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00598">
        <property type="entry name" value="HTHMARR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00347">
        <property type="entry name" value="HTH_MARR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50995">
        <property type="entry name" value="HTH_MARR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH marR-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="143"/>
            <end position="163"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ63673.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="163" mass="18067" checksum="64B152808FE95B7D" modified="2015-12-09" version="1">MSKKLRVFYLLQVAYSAVFRAADHRARQNTGLTVTQIAVLFLLNEKDGQPVSEIANRLSMGKSSLTGLIDRMSEKRLVKRSPCPIDGRVTRVYLEETGRTAAQEAALHTQHYNAALLAPFTEDEQDVIGRFLHHLATNADTIINGPNAGQSTLPHMDQDKSAH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZR32</accession>
    <name>A0A0M6ZR32_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Glycine betaine/carnitine transport binding protein GbuC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">gbuC</name>
        <name evidence="4" type="ORF">LAX5112_00406</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64797.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670379.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00406"/>
    <dbReference type="EnsemblBacteria" id="CTQ64797">
        <property type="protein sequence ID" value="CTQ64797"/>
        <property type="gene ID" value="LAX5112_00406"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033265">
        <property type="term" value="F:choline binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015871">
        <property type="term" value="P:choline transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd13640">
        <property type="entry name" value="PBP2_ChoX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017783">
        <property type="entry name" value="ABC_choline_sub-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007210">
        <property type="entry name" value="ABC_Gly_betaine_transp_sub-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04069">
        <property type="entry name" value="OpuAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03414">
        <property type="entry name" value="ABC_choline_bnd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809217" evidence="2">
        <location>
            <begin position="24"/>
            <end position="314"/>
        </location>
    </feature>
    <feature type="domain" description="OpuAC" evidence="3">
        <location>
            <begin position="30"/>
            <end position="284"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF04069"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ64797.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="314" mass="34070" checksum="B3130CDD43494F46" modified="2015-12-09" version="1">MKLTTKLVSGLALGLMMTGTSLAAEPESCKTVRFSDVGWTDITATTAATTVVLDALGYDTEIKILSVPVTYASLKNKDIDIFLGNWMPTMEGDIKAYREDGSVETVRANLEGAKYTLAVPQYTYDKGLKSFQDIAKFKDDLDGKIYGIEPGNDGNRLIIGMIDENLFGLEGFEVVESSEQGMLAQVSRAEKRDKDIVFLGWEPHPMNANFNMAYLEGGDEIFGPNYGGATVYTNVRAGYTSECANVGKLLNNLEFSLAMENEIMGAILNDGEDPQKAAKAWLKAHPATFEAWLDGVTTFDGGESFAAVKGDLGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRC3</accession>
    <name>A0A0M6ZRC3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Methylglyoxal synthase</fullName>
            <shortName evidence="2">MGS</shortName>
            <ecNumber evidence="2">4.2.3.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2 5" type="primary">mgsA</name>
        <name evidence="5" type="ORF">LAX5112_00571</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>dihydroxyacetone phosphate = methylglyoxal + phosphate</text>
            <dbReference type="Rhea" id="RHEA:17937"/>
            <dbReference type="ChEBI" id="CHEBI:17158"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57642"/>
            <dbReference type="EC" id="4.2.3.3"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the methylglyoxal synthase family.</text>
    </comment>
    <dbReference type="EC" id="4.2.3.3" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65278.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670500.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00571"/>
    <dbReference type="EnsemblBacteria" id="CTQ65278">
        <property type="protein sequence ID" value="CTQ65278"/>
        <property type="gene ID" value="LAX5112_00571"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008929">
        <property type="term" value="F:methylglyoxal synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019242">
        <property type="term" value="P:methylglyoxal biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01422">
        <property type="entry name" value="MGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1380">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00549">
        <property type="entry name" value="Methylglyoxal_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004363">
        <property type="entry name" value="Methylgl_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018148">
        <property type="entry name" value="Methylglyoxal_synth_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011607">
        <property type="entry name" value="MGS-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036914">
        <property type="entry name" value="MGS-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30492">
        <property type="entry name" value="PTHR30492"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02142">
        <property type="entry name" value="MGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006614">
        <property type="entry name" value="Methylglyox_syn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00851">
        <property type="entry name" value="MGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52335">
        <property type="entry name" value="SSF52335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00160">
        <property type="entry name" value="MGSA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01335">
        <property type="entry name" value="METHYLGLYOXAL_SYNTH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51855">
        <property type="entry name" value="MGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 5" id="KW-0456">Lyase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MGS-like" evidence="4">
        <location>
            <begin position="1"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="2">
        <location>
            <begin position="38"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="2">
        <location>
            <begin position="59"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor/acceptor" evidence="2 3">
        <location>
            <position position="65"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="12"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="16"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="92"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006287"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00549"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR006614-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51855"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ65278.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="143" mass="15198" checksum="84A497C34CC138A7" modified="2015-12-09" version="1">MPAKPTLALVAHDAKKDAMVEFAERHEEKLTSFDLVATGTTGGRIQEACPSLNINRFKSGPLGGDQQIGAMIAEGRLHGLIFFVDPLSPMPHDVDVKALMRLAVVYDMPMALNPSTAGILLRSSRLTGLTTTSNTPEVGAAAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRQ4</accession>
    <name>A0A0M6ZRQ4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="18">Siroheme synthase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="18" type="primary">cysG_2</name>
        <name evidence="18" type="ORF">LAX5112_00432</name>
    </gene>
    <organism evidence="18 19">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="19" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="19">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>NAD(+) + precorrin-2 = 2 H(+) + NADH + sirohydrochlorin</text>
            <dbReference type="Rhea" id="RHEA:15613"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:58351"/>
            <dbReference type="ChEBI" id="CHEBI:58827"/>
            <dbReference type="EC" id="1.3.1.76"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="13">Porphyrin-containing compound metabolism; siroheme biosynthesis; precorrin-2 from uroporphyrinogen III: step 1/1.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2">Porphyrin-containing compound metabolism; siroheme biosynthesis; sirohydrochlorin from precorrin-2: step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 15">Belongs to the precorrin methyltransferase family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64876.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00432"/>
    <dbReference type="EnsemblBacteria" id="CTQ64876">
        <property type="protein sequence ID" value="CTQ64876"/>
        <property type="gene ID" value="LAX5112_00432"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00262">
        <property type="reaction ID" value="UER00211"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043115">
        <property type="term" value="F:precorrin-2 dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051266">
        <property type="term" value="F:sirohydrochlorin ferrochelatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004851">
        <property type="term" value="F:uroporphyrin-III C-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009236">
        <property type="term" value="P:cobalamin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019354">
        <property type="term" value="P:siroheme biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd11642">
        <property type="entry name" value="SUMT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.210">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.950.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1010.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000878">
        <property type="entry name" value="4pyrrol_Mease"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035996">
        <property type="entry name" value="4pyrrol_Methylase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014777">
        <property type="entry name" value="4pyrrole_Mease_sub1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014776">
        <property type="entry name" value="4pyrrole_Mease_sub2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006366">
        <property type="entry name" value="CobA/CysG_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037115">
        <property type="entry name" value="Sirohaem_synt_dimer_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012409">
        <property type="entry name" value="Sirohaem_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019478">
        <property type="entry name" value="Sirohaem_synthase_dimer_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006367">
        <property type="entry name" value="Sirohaem_synthase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003043">
        <property type="entry name" value="Uropor_MeTrfase_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10414">
        <property type="entry name" value="CysG_dimeriser"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00590">
        <property type="entry name" value="TP_methylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF036426">
        <property type="entry name" value="Sirohaem_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53790">
        <property type="entry name" value="SSF53790"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01469">
        <property type="entry name" value="cobA_cysG_Cterm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01470">
        <property type="entry name" value="cysG_Nterm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00840">
        <property type="entry name" value="SUMT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0169">Cobalamin biosynthesis</keyword>
    <keyword evidence="10" id="KW-0456">Lyase</keyword>
    <keyword evidence="5 15" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="12" id="KW-0511">Multifunctional enzyme</keyword>
    <keyword evidence="9" id="KW-0520">NAD</keyword>
    <keyword evidence="8" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="11" id="KW-0627">Porphyrin biosynthesis</keyword>
    <keyword evidence="19" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="6 15" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="CysG_dimeriser" evidence="17">
        <location>
            <begin position="177"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="domain" description="TP_methylase" evidence="16">
        <location>
            <begin position="240"/>
            <end position="451"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="14">
        <location>
            <position position="271"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="14">
        <location>
            <position position="293"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001156"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005010"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005879"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022573"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023268"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00025705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="PIRSR" id="PIRSR036426-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="RuleBase" id="RU003960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="Pfam" id="PF00590"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="Pfam" id="PF10414"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="EMBL" id="CTQ64876.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="496" mass="52769" checksum="5F92D992ED95B238" modified="2015-12-09" version="1">MPTSRKPAEVRPKRRAARVEPLASLPLFFPLEGRKVVLAGGTDAAAWKAELLAASGAEVHVFAEELSEVFETLLERGSVKGRFVHHARPWSADVISGAALAIADAPSDGAAQAFYCTAKAAGVPVNVIDNPPFCEFQFGSIVNRSPVVIGISTNGVAPILGQAIRRRIETLLPTLLQDWAALAGRIRARVLETLQPGAERRRFWERFTDMAFSGKAVAEETAICDLEGVFGEAAHAGQGRVTLVGAGPGDAENLTLKAMRALQSADVILFDDLVDDSVLELARREAKRMLVGKRGGRESCRQEDINDMMVSLASQGKHVVRLKSGDPMIFGRAGEELERLAMAGIPASVVPGITAASAMAAELGVSLTHRDHAQAVRFVTAHSRQGELPGTVDWNGLADPATTTVFYMGRRMASRISERLIAKGRQPNTPVRVMANVSRQNSVSWSGVLFDLADGVESLATGGPVLIAVGEVFANVGQAAEAASHHDTELRAAAAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRS5</accession>
    <name>A0A0M6ZRS5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">4-carboxymuconolactone decarboxylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00645</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65479.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670597.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00645"/>
    <dbReference type="EnsemblBacteria" id="CTQ65479">
        <property type="protein sequence ID" value="CTQ65479"/>
        <property type="gene ID" value="LAX5112_00645"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051920">
        <property type="term" value="F:peroxiredoxin activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1290.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029032">
        <property type="entry name" value="AhpD-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003779">
        <property type="entry name" value="CMD-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02627">
        <property type="entry name" value="CMD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69118">
        <property type="entry name" value="SSF69118"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CMD" evidence="1">
        <location>
            <begin position="36"/>
            <end position="117"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02627"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65479.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="125" mass="13902" checksum="09903E400CD4AF19" modified="2015-12-09" version="1">MDQDLFEKGLAQRKATLGAEYVEKNLAAADDFTRPFQEAMTAWCWGFGWGDDVIDAKTRSMMNLAMIGALGKMTEWETHCRGAVTNGVSKEEIRAIIHVIGIYCGVPQALECFRVAKKVLEEADL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZS22</accession>
    <name>A0A0M6ZS22_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Aliphatic sulfonates import ATP-binding protein SsuB</fullName>
            <ecNumber evidence="6">3.6.3.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">ssuB_3</name>
        <name evidence="6" type="ORF">LAX5112_00675</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.-" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65555.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00675"/>
    <dbReference type="EnsemblBacteria" id="CTQ65555">
        <property type="protein sequence ID" value="CTQ65555"/>
        <property type="gene ID" value="LAX5112_00675"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="20"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="53"/>
            <end position="60"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ65555.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="271" mass="30035" checksum="42F84377E497C2B3" modified="2015-12-09" version="1">MTAMVNTNMQSDIVSSSSVVSLKGISKTFSNGTVALNNMSLDIRQGEFVSLLGPSGCGKSTALRIITSLTGPTTGRVEWPLEESKQKEHELSFVFQEPTLMPWATVFGNVWLPLRLKGVSKKAAYDRVMEALQGVGLEQFADSYPRELSGGMKMRVSIARALVTKPKLLLMDEPFAALDEITRFKLNNDLLRLWETFGWTVIFVTHSVFESVYLSNRIVVMAARPGRVVNDMAIDAPYPRDEAFRTSSVYAGFCRDVSDALHKAMIVGDRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSQ7</accession>
    <name>A0A0M6ZSQ7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 6">Bacterioferritin</fullName>
            <ecNumber evidence="4">1.16.3.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">bfr_1</name>
        <name evidence="9" type="ORF">LAX5112_00580</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>4 Fe(2+) + 4 H(+) + O2 = 4 Fe(3+) + 2 H2O</text>
            <dbReference type="Rhea" id="RHEA:11148"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:29033"/>
            <dbReference type="ChEBI" id="CHEBI:29034"/>
            <dbReference type="EC" id="1.16.3.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>heme b</name>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 4 6">Belongs to the bacterioferritin family.</text>
    </comment>
    <dbReference type="EC" id="1.16.3.1" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65302.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670508.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00580"/>
    <dbReference type="EnsemblBacteria" id="CTQ65302">
        <property type="protein sequence ID" value="CTQ65302"/>
        <property type="gene ID" value="LAX5112_00580"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008199">
        <property type="term" value="F:ferric iron binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004322">
        <property type="term" value="F:ferroxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006879">
        <property type="term" value="P:cellular iron ion homeostasis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006826">
        <property type="term" value="P:iron ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00907">
        <property type="entry name" value="Bacterioferritin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1260.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002024">
        <property type="entry name" value="Bacterioferritin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012347">
        <property type="entry name" value="Ferritin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009040">
        <property type="entry name" value="Ferritin-like_diiron"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009078">
        <property type="entry name" value="Ferritin-like_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008331">
        <property type="entry name" value="Ferritin_DPS_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00210">
        <property type="entry name" value="Ferritin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002560">
        <property type="entry name" value="Bacterioferritin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00601">
        <property type="entry name" value="BACFERRITIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47240">
        <property type="entry name" value="SSF47240"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00754">
        <property type="entry name" value="bfr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00549">
        <property type="entry name" value="BACTERIOFERRITIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50905">
        <property type="entry name" value="FERRITIN_LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3 4 6" id="KW-0349">Heme</keyword>
    <keyword evidence="4 5 6" id="KW-0408">Iron</keyword>
    <keyword evidence="4 6" id="KW-0409">Iron storage</keyword>
    <keyword evidence="4 5 6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ferritin-like diiron" evidence="8">
        <location>
            <begin position="1"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="7">
        <location>
            <begin position="38"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="18"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="50"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
            <label>3</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="51"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="54"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="94"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="127"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="130"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
            <label>2</label>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008093"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRNR" id="PIRNR002560"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR002560-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU000623"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50905"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ65302.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="161" mass="18458" checksum="C1D782C799B54411" modified="2015-12-09" version="1">MKGDARVIDYLNKALRHELTAVNQYWLHGRLLADWGFGKLAAKELEEAEEERQHAQDLMDRILFLEGFPNLQTLDPLRIGQSVKECLEGDLAAEYAARSLYHEAREVCREQGDYVSMKLFETLLSDEESHIDFLETQLALIERIGIDNYSQLQAQSADTAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZT29</accession>
    <name>A0A0M6ZT29_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">TRAP-type C4-dicarboxylate transport system, small permease component</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">LAX5112_00805</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65925.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00805"/>
    <dbReference type="EnsemblBacteria" id="CTQ65925">
        <property type="protein sequence ID" value="CTQ65925"/>
        <property type="gene ID" value="LAX5112_00805"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007387">
        <property type="entry name" value="TRAP_DctQ"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04290">
        <property type="entry name" value="DctQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="12"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="104"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="144"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="174"/>
            <end position="205"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ65925.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="205" mass="22524" checksum="F895FA60EEB84016" modified="2015-12-09" version="1">MLRLLDTGLKALATAANWVAIGANAVGTLIVLGLVLVVNYDVVARGFFNAPFRGAVEVVQFSMVLIVFLQLPDVVRTSRLTRSDGLLTILGTTRPKLADTIRRVIDFASAVFMALVAYAIWPEFVEMYETKDFFGVPGIFTAPWWPIKLAIYLSAGLCTLLFLFKAFERLGKPSDDDSELGYSGPYFGQKNAPLPDEPAAEEKIQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTN2</accession>
    <name>A0A0M6ZTN2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00882</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66135.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670775.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00882"/>
    <dbReference type="EnsemblBacteria" id="CTQ66135">
        <property type="protein sequence ID" value="CTQ66135"/>
        <property type="gene ID" value="LAX5112_00882"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045442">
        <property type="entry name" value="DUF6505"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20115">
        <property type="entry name" value="DUF6505"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ66135.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="160" mass="17550" checksum="592BF5FC11219673" modified="2015-12-09" version="1">MKLARAIHLDESDQNVYFSPARTGEWCLSGGFEFSDWTEAELTGKARQAFVNGWLGLETFGRVTFVAVTPIEEPELNQLVDRLAQHFVDIYGAPSVDAARGVASEELSYMASMCAEHEDNTLLAVQRELSDEGLREGFSAIKPQAAELDMVAVHGDMGGH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTP4</accession>
    <name>A0A0M6ZTP4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Stage 0 sporulation protein KD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">oppD_2</name>
        <name evidence="8" type="ORF">LAX5112_00686</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65586.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670629.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00686"/>
    <dbReference type="EnsemblBacteria" id="CTQ65586">
        <property type="protein sequence ID" value="CTQ65586"/>
        <property type="gene ID" value="LAX5112_00686"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015833">
        <property type="term" value="P:peptide transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013563">
        <property type="entry name" value="Oligopep_ABC_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08352">
        <property type="entry name" value="oligo_HPY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01727">
        <property type="entry name" value="oligo_HPY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ABC transporter" evidence="7">
        <location>
            <begin position="7"/>
            <end position="257"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="43"/>
            <end position="50"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ65586.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="336" mass="36067" checksum="1E09AC4137068188" modified="2015-12-09" version="1">MSDTPLLKVSDLIVEFPTRNGVLRPVDRVGFEVRAGEILGLVGESGAGKSMCGSAIIGLIDRPGRISGGEIHLDGERIDNLPEERMRRIRGKKIAMVFQDPLTSLNPLMTVGQQLIQTIRTHLALSQNDARAKAIALLEEVGIPAAATRIDAYPHQFSGGMRQRVVISLALAAEPELIIADEPTTALDVSVQAQIMALLKRLCRERGTAVILITHDMGVIAETTDRVAVLYAGRIAEIGPTRNVLSAPSHPYTVGLMASTPSTTGSLQTLSQIPGSMPNLRAIPKGCAFNQRCTKAISACFNDIPVLEPVNGSDVACWLYDPAYKQIEKEISGASE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTS4</accession>
    <name>A0A0M6ZTS4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Multiple sugar-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">msmE_2</name>
        <name evidence="7" type="ORF">LAX5112_00709</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the bacterial solute-binding protein 1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65652.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670646.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00709"/>
    <dbReference type="EnsemblBacteria" id="CTQ65652">
        <property type="protein sequence ID" value="CTQ65652"/>
        <property type="gene ID" value="LAX5112_00709"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006059">
        <property type="entry name" value="SBP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006061">
        <property type="entry name" value="SBP_1_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13416">
        <property type="entry name" value="SBP_bac_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01037">
        <property type="entry name" value="SBP_BACTERIAL_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0574">Periplasm</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="6">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005808952" evidence="6">
        <location>
            <begin position="23"/>
            <end position="417"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008520"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ65652.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="417" mass="45189" checksum="858B919DCDF12552" modified="2015-12-09" version="1">MKLRTLGIALASTALMTTAAMAEDVTLTIESWRTDDLTLWQDKIIPAFEKDNPGIKVVFSPTAPTEYNAALNSKLEAGSAGDLITCRPFDASLALFEAGHLAALDDMDAMSNFSDVAKSAWQTDDASASFCVPMASVIHGFIYNKDAFEELGLEAPTTEAEFFAVLDKIKDDGSYIPMAMGTNDQWEAATMGYNNIGPNYWKGEEGRLELIKGEQKLTDEQWVAPYATLAKWAPYLGFGYEAQTYPDSQNLFTLGRAAIYPAGSWEIAGFNTQADFEMGAFKAPVKAEGDTCYISDHTDIGIGLNAASPNADAAKTFLAWVASPEFASIFGNALPGFFPLSKTPVELEDPLAKEFASWRGECESTIRSTYQILSRGTPNLENETWGASVAAIKGTETPEALGAKLQDGLTSWYAPHQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTV1</accession>
    <name>A0A0M6ZTV1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glucosamine kinase GspK</fullName>
            <ecNumber evidence="2">2.7.1.8</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">gspK</name>
        <name evidence="2" type="ORF">LAX5112_00707</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.7.1.8" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65646.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670645.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00707"/>
    <dbReference type="EnsemblBacteria" id="CTQ65646">
        <property type="protein sequence ID" value="CTQ65646"/>
        <property type="gene ID" value="LAX5112_00707"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047931">
        <property type="term" value="F:glucosamine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002731">
        <property type="entry name" value="ATPase_BadF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01869">
        <property type="entry name" value="BcrAD_BadFG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="SSF53067"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="BcrAD_BadFG" evidence="1">
        <location>
            <begin position="12"/>
            <end position="253"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01869"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65646.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="292" mass="30517" checksum="B7155DDD65ACD27F" modified="2015-12-09" version="1">MIDFADHWVLAVDGGGTRCRLALSSPAADIRVEVGSANVTTDIYAALSEINVGLKALAGKADLAPGDLARVPAYFALAGFQANRDRGRFLEGIPLRRIKVEDDRPAALQGALGVLDGALIHSGTGSFFGVQVDTRKRFCGGWGAVLGDFGSAAWFGKSALALVLDAEDGLIEQTVLTEKLKDRYGGAAGILAFANTARPAGFGALAPEILSQSDDPISERLIDQAVKHFEENLLHLGWSAGMPVCLTGGLAPHLAPFLTEPIRKNLSSAAGAPIDGAIAIAREFAKEVQVAC</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUF0</accession>
    <name>A0A0M6ZUF0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Endoglucanase 3</fullName>
            <ecNumber evidence="5">3.2.1.4</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">cel-3</name>
        <name evidence="5" type="ORF">LAX5112_00725</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the glycosyl hydrolase 5 (cellulase A) family.</text>
    </comment>
    <dbReference type="EC" id="3.2.1.4" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65700.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670659.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00725"/>
    <dbReference type="EnsemblBacteria" id="CTQ65700">
        <property type="protein sequence ID" value="CTQ65700"/>
        <property type="gene ID" value="LAX5112_00725"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008810">
        <property type="term" value="F:cellulase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071704">
        <property type="term" value="P:organic substance metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001547">
        <property type="entry name" value="Glyco_hydro_5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00150">
        <property type="entry name" value="Cellulase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 2 5" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="2 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005808968" evidence="3">
        <location>
            <begin position="26"/>
            <end position="393"/>
        </location>
    </feature>
    <feature type="domain" description="Cellulase" evidence="4">
        <location>
            <begin position="69"/>
            <end position="361"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU361153"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00150"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ65700.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="393" mass="44534" checksum="3254CA827907FD93" modified="2015-12-09" version="1">MWVRTLAKLILPTCLAMTAWGGAHASPQNADHCFTAQTFPAFENPALLATMARGVNLPNWDADDIFYRPDLSTIRRLYESGFTHIRLPVFHETFNTGDWGSEDLSKYSNELSAMLENLLANGFTVTVDLHPDGTFNHVYRTAPEEGYRRLEDSWRHLSSVLDGTSPAEVALEFLNEPDTSPEIWEDHTGRLSRKLREWLPDHTFVVGPHGPMRHESLANFPPLTDGNTVYAIHFYDPFLFTHQGAEWHPPDDTARLATGIPFPTKENDARIRALVSRLQAEGHEQAAEEIRRIFEEPWTEKDVQNAFSTIENWSQKHGLPVVINEFGVLSYDAPRNDRLHWLQTVTKEAEARCIGWTHWDYSDGFGIVDPMSQALDNEAINALFDRPVSAGAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZV58</accession>
    <name>A0A0M6ZV58_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative transcription regulator, contains HTH domain (MarR family)</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01046</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66655.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671212.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01046"/>
    <dbReference type="EnsemblBacteria" id="CTQ66655">
        <property type="protein sequence ID" value="CTQ66655"/>
        <property type="gene ID" value="LAX5112_01046"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000835">
        <property type="entry name" value="HTH_MarR-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023187">
        <property type="entry name" value="Tscrpt_reg_MarR-type_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13463">
        <property type="entry name" value="HTH_27"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00347">
        <property type="entry name" value="HTH_MARR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01117">
        <property type="entry name" value="HTH_MARR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50995">
        <property type="entry name" value="HTH_MARR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH marR-type" evidence="1">
        <location>
            <begin position="25"/>
            <end position="161"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66655.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="171" mass="19749" checksum="B9DDC627E9099361" modified="2015-12-09" version="1">MITASRAVDAVSKGEEEEVAIKPLYLEALTLVERLHRRLLDVIKDEFDRMGRSDVNSVQALLLFNIGDAELTAGELRTRGYYLGSNVSYNLKKLVETGYIHHQRSRMDRRSVRVSLTDKGQEVAKIVNDLYERHILSVEQVGEIGPQDFVTLNKSLRRLERFWTDQILYRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVH1</accession>
    <name>A0A0M6ZVH1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">N-acetyl-D-glucosamine kinase</fullName>
            <ecNumber evidence="1">2.7.1.59</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">nagK_1</name>
        <name evidence="1" type="ORF">LAX5112_00855</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.7.1.59" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66060.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670757.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00855"/>
    <dbReference type="EnsemblBacteria" id="CTQ66060">
        <property type="protein sequence ID" value="CTQ66060"/>
        <property type="gene ID" value="LAX5112_00855"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045127">
        <property type="term" value="F:N-acetylglucosamine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000600">
        <property type="entry name" value="ROK"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18964">
        <property type="entry name" value="PTHR18964"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00480">
        <property type="entry name" value="ROK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="SSF53067"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01125">
        <property type="entry name" value="ROK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0418">Kinase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ66060.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="304" mass="31386" checksum="77EA6427DE2996CF" modified="2015-12-09" version="1">MVTSFDIGGSFIRYAHPSARGPVEETGRVPTPLHSWSEFVEALRKCLPETRGPAVISLAGAFDAQTDIADVANIPCLNGRRIASDLTKELGTPVAIINDADAFALAEAVEGSGAGKETVFAIILGSGVGGGLVHKGGLVSGRGGIAGEWGHGPVVDPTAGGSLSGIPHFQCGCGQTGCLDAYGSARGLEKIHAALHNTLCSSIEITTAWHAGEPQAARTIDAFTTILARALSMVINLLGPDVIPVSGGLSADDRLLAEIDRKTRAITLANYSEPLLVRGVFSKTGGLQGASIHARRAYPNEFAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVM1</accession>
    <name>A0A0M6ZVM1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01089</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66778.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670957.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ66778">
        <property type="protein sequence ID" value="CTQ66778"/>
        <property type="gene ID" value="LAX5112_01089"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ66778.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="339" mass="35229" checksum="536816340E468B6E" modified="2015-12-09" version="1">MALADWNGFYDPDTANLDNTAASAASNAAARMDSSRSCYFYVPSTSSDEDEHRLGAVLRLGEYADIEEQAFQADDLAEWYPQQHITDEGSYADAYKNASGGGDGILLACDGRILVKSEEKMYVETADFSQQVNGDYTLNVDGAASVTSSGKLEMTSSAEVVSISSGAGKDITLSAGNGTGVIQTNAKEETKTIAGDTYEYNSGNTKSFTEGNSIDMTFGGSLAIFGGGELSIGMGATTEINATVAVGMAAMTVDVVGIAAEVTGKEVDLKELAVKLKTLLVSNETMAAQIKQMSVEMTELKAASKTISAETSTVAAKSESVKAKSGGVTADTTGLVVNI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZW63</accession>
    <name>A0A0M6ZW63_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00973</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66452.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ66452">
        <property type="protein sequence ID" value="CTQ66452"/>
        <property type="gene ID" value="LAX5112_00973"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ66452.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="45" mass="5000" checksum="21BE7A5DAC611608" modified="2015-12-09" version="1">MQNAVDIERPRVGGTVHSLTKHLQGFDCIRGKCTAEIDFLSQAKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWD9</accession>
    <name>A0A0M6ZWD9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 4">Guanine deaminase</fullName>
            <shortName evidence="4">Guanase</shortName>
            <ecNumber evidence="3 4">3.5.4.3</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">Guanine aminohydrolase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6" type="primary">guaD_2</name>
        <name evidence="6" type="ORF">LAX5112_00758</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>guanine + H(+) + H2O = NH4(+) + xanthine</text>
            <dbReference type="Rhea" id="RHEA:14665"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16235"/>
            <dbReference type="ChEBI" id="CHEBI:17712"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="EC" id="3.5.4.3"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="4">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="4">Binds 1 zinc ion per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="1 4">Purine metabolism; guanine degradation; xanthine from guanine: step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 4">Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.</text>
    </comment>
    <dbReference type="EC" id="3.5.4.3" evidence="3 4"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65793.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670682.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00758"/>
    <dbReference type="EnsemblBacteria" id="CTQ65793">
        <property type="protein sequence ID" value="CTQ65793"/>
        <property type="gene ID" value="LAX5112_00758"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00603">
        <property type="reaction ID" value="UER00660"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008892">
        <property type="term" value="F:guanine deaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006147">
        <property type="term" value="P:guanine catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006680">
        <property type="entry name" value="Amidohydro-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014311">
        <property type="entry name" value="Guanine_deaminase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011059">
        <property type="entry name" value="Metal-dep_hydrolase_composite"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032466">
        <property type="entry name" value="Metal_Hydrolase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11271:SF6">
        <property type="entry name" value="PTHR11271:SF6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01979">
        <property type="entry name" value="Amidohydro_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51338">
        <property type="entry name" value="SSF51338"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51556">
        <property type="entry name" value="SSF51556"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02967">
        <property type="entry name" value="guan_deamin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Amidohydro-rel" evidence="5">
        <location>
            <begin position="69"/>
            <end position="428"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006745"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012781"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU366009"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF01979"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ65793.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="449" mass="49953" checksum="5AD1681A1AD721B3" modified="2015-12-09" version="1">MQSDRLMLRGRILTFNAEPFGAEDTSAYDYIEDGALLIENGMIAGRGEFSELIGDAAGAEIVDHRPHLLMAGFIDTHIHFPQVQVIASWGAQLLDWLNTYTFPEETRFSDDDHAAAMACRFFDLLTNHGTTTAVAYCSVHKGSAEAYFEEAEQRNMRVIGGKVLMDRNAPDGLRDTPQSGYDDTKDLIAKWHGKGRASYAITPRFAITSTPEQMDMARALVREHPDCFVQTHLSENKNEIAYTLELYPEARDYLDVYQRYGLLSDKMLLGHSIHLEPREVAVMAETGSRPVFCPTSNLFLGSGLFNEEKMRQKGIVSAIATDIGAGTSYSMLQTLNEGYKILQLQDQKLHPLRAFHWMTRGNAVALGMEEKIGTLDAGTEADVVVLNSKATDAMALRMERASNLSEELFILQMLGDDRAVEEVYIAGQAQKSGRRPAAIPAFERVLELV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZX16</accession>
    <name>A0A0M6ZX16_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01069</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66722.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008196721.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ66722">
        <property type="protein sequence ID" value="CTQ66722"/>
        <property type="gene ID" value="LAX5112_01069"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1490.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018988">
        <property type="entry name" value="DUF2000"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023476">
        <property type="entry name" value="Pep_tRNA_hydro_II_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09391">
        <property type="entry name" value="DUF2000"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF102462">
        <property type="entry name" value="SSF102462"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ66722.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="135" mass="14882" checksum="FDDF53BD63EF03DB" modified="2015-12-09" version="1">MFDTKFVIVVREDLAMWQKLNVTAFLSTGVAAAKPDIIGMPYQDADGNVYHPMSVQPVIVLTANPDALKKIHRRTLERQVKSSLYIEEMFSTGHDSANRAVFAEHTPDGAKVVGIAFHTDKKTADKISKGAKMHG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZX88</accession>
    <name>A0A0M6ZX88_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">phoQ</name>
        <name evidence="9" type="ORF">LAX5112_01365</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67388.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01365"/>
    <dbReference type="EnsemblBacteria" id="CTQ67388">
        <property type="protein sequence ID" value="CTQ67388"/>
        <property type="gene ID" value="LAX5112_01365"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5 9" id="KW-0418">Kinase</keyword>
    <keyword evidence="6" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 9" id="KW-0808">Transferase</keyword>
    <keyword evidence="6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="27"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="185"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="8">
        <location>
            <begin position="209"/>
            <end position="260"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="7">
        <location>
            <begin position="268"/>
            <end position="474"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ67388.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="476" mass="51098" checksum="7110B19B9913B368" modified="2015-12-09" version="1">MTSDSAEGAAEPAPKPIKPQRSLAGRLVLVAAVWSTLALAIAGVFLVSLYQRASERSFDAQLEIHIKALVSEMLETSDETVLRATPQVQQPTYLGDPRFSLPLSGWYWTVRQADTGTVLYASESLVGDPLAVPALGEADTGAGFVAGPTGDEIRVMQQRIAVGETPYVIAVGAATAGFWADIREFARLAALTLLIVGLGLVLATFLQVRVGLMPLVRLRSSLSAVRQGEAERIDEALPREIAPLAVELNSLIGSNKEIVERARTHVGNLAHGLKTPLSVISNEARASEGPLAEKVIEQTEVMSTQIQHHLERARMAAQRRVIGVSCEVQPVLDRLVRAMNKIYRERDVRLDGLQDAKLRFRGEGQDLEEMSGNLIDNACKWAKSAVQVTATPIADASSARGMVEIRVEDDGPGLSEEQCAEAVKRGRRLDETVPGTGLGLSIVADLAALYGGRLELGRSSMGGLRARLILPLLGDG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXQ2</accession>
    <name>A0A0M6ZXQ2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">NAD kinase</fullName>
            <ecNumber evidence="5">2.7.1.23</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">ATP-dependent NAD kinase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6" type="primary">ppnK</name>
        <name evidence="5" type="synonym">nadK</name>
        <name evidence="6" type="ORF">LAX5112_01435</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>ATP + NAD(+) = ADP + H(+) + NADP(+)</text>
            <dbReference type="Rhea" id="RHEA:18629"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.1.23"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="5">
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the NAD kinase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.23" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67568.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008189609.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01435"/>
    <dbReference type="EnsemblBacteria" id="CTQ67568">
        <property type="protein sequence ID" value="CTQ67568"/>
        <property type="gene ID" value="LAX5112_01435"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003951">
        <property type="term" value="F:NAD+ kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019674">
        <property type="term" value="P:NAD metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006741">
        <property type="term" value="P:NADP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.200.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00361">
        <property type="entry name" value="NAD_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017438">
        <property type="entry name" value="ATP-NAD_kinase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017437">
        <property type="entry name" value="ATP-NAD_kinase_PpnK-typ_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016064">
        <property type="entry name" value="NAD/diacylglycerol_kinase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002504">
        <property type="entry name" value="NADK"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01513">
        <property type="entry name" value="NAD_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF111331">
        <property type="entry name" value="SSF111331"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2 5 6" id="KW-0418">Kinase</keyword>
    <keyword evidence="4 5" id="KW-0520">NAD</keyword>
    <keyword evidence="3 5" id="KW-0521">NADP</keyword>
    <keyword evidence="5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 5 6" id="KW-0808">Transferase</keyword>
    <feature type="active site" description="Proton acceptor" evidence="5">
        <location>
            <position position="59"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="59"/>
            <end position="60"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="129"/>
            <end position="130"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="159"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="167"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="170"/>
            <end position="175"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00361"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ67568.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="270" mass="29791" checksum="B967D075458292D8" modified="2015-12-09" version="1">MNRIVSSPQPDDASQITDKKLAFVSSDTDEAKHARETLAAQYGEVPHADADIIVALGGDGLMLETLYAQMGTNKPIYGMNRGSVGFLMNEYREDGLRERLAKADTTAIYPLEMTATDDNGVEHSALAINEVSLLRQTSQAARLKISVDGRVRLEELICDGIIVATPAGSTAYNLSAHGPILPITAQLLALTPISAFRPRRWRGALLPDWAAVDIEILDPEKRPVSASADHREIRSVTKVSVRESTEKEGRIMFDDDHGWDERILTEMFRY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYN7</accession>
    <name>A0A0M6ZYN7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01508</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67759.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671315.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01508"/>
    <dbReference type="EnsemblBacteria" id="CTQ67759">
        <property type="protein sequence ID" value="CTQ67759"/>
        <property type="gene ID" value="LAX5112_01508"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009964">
        <property type="entry name" value="DUF1491"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07372">
        <property type="entry name" value="DUF1491"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="109"/>
            <end position="129"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67759.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="129" mass="14280" checksum="B8D5DC7809EEC3D8" modified="2015-12-09" version="1">MRVTSELFVSALVRRIFSENGFAAVTRKGNAEAGAILIVVDRLDGTFDFYSPAPQAFFDDDAGQGDGGRLFEKTLEAVAREAVDKRLESEARMDPDFWVVDIEAEAGNVELPTAEPEHPRNPADDFFRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZG2</accession>
    <name>A0A0M6ZZG2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Sulfoacetaldehyde reductase</fullName>
            <ecNumber evidence="2">1.1.1.313</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">isfD_2</name>
        <name evidence="2" type="ORF">LAX5112_01637</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the short-chain dehydrogenases/reductases (SDR) family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.313" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68105.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671406.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01637"/>
    <dbReference type="EnsemblBacteria" id="CTQ68105">
        <property type="protein sequence ID" value="CTQ68105"/>
        <property type="gene ID" value="LAX5112_01637"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00106">
        <property type="entry name" value="adh_short"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU000363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68105.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="257" mass="27466" checksum="C8ECB881179CA7B1" modified="2015-12-09" version="1">MTATALITGASSGIGAAFARYHAARGGDLVLVARREDALEQLKTELEAKHGIKVHVFARDVGSGEAAQALYDEITKAGIEVGILINNAGFGGRGNHIERELASEQAMVDLNVISLMTLTRLFGHEMVQRGKGYILNVGSTAGFMPGPSQAVYFATKAFVNSYSQALNEELKPKGVKVTLLAPGYVETEFAKIADLEGTQLTRSGATPESVAKIGYNAMMAGKLVAINEKALDFSLNWLVPLLPRRAVLKMVSKMQAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A082</accession>
    <name>A0A0M7A082_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01265</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67204.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671099.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67204">
        <property type="protein sequence ID" value="CTQ67204"/>
        <property type="gene ID" value="LAX5112_01265"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67204.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="109" mass="12407" checksum="51DBD5D6FB81A5FE" modified="2015-12-09" version="1">MTEEEMRKFLADNGDLIAERVRDQMVEQIAETYRWQVPDTINKVVTEFMSDKIAPAIREHLQSNEGPIIAAAITATDQITDKLSEVMVTKAVENMNGYRFGQTIEALFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0S9</accession>
    <name>A0A0M7A0S9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Flagellar biosynthetic protein FliO</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_01669</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68191.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671430.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01669"/>
    <dbReference type="EnsemblBacteria" id="CTQ68191">
        <property type="protein sequence ID" value="CTQ68191"/>
        <property type="gene ID" value="LAX5112_01669"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044781">
        <property type="term" value="P:bacterial-type flagellum organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022781">
        <property type="entry name" value="Flagellar_biosynth_FliO"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04347">
        <property type="entry name" value="FliO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7" id="KW-0966">Cell projection</keyword>
    <keyword evidence="7" id="KW-0969">Cilium</keyword>
    <keyword evidence="7" id="KW-0282">Flagellum</keyword>
    <keyword evidence="4 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="20"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="104"/>
            <end position="407"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="436"/>
            <end position="502"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="5">
        <location>
            <begin position="152"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="174"/>
            <end position="226"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="236"/>
            <end position="275"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="351"/>
            <end position="373"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="443"/>
            <end position="485"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ68191.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="520" mass="54701" checksum="CB0DE2A48B931B0E" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0U9</accession>
    <name>A0A0M7A0U9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Flagellar protein FliL</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">fliL</name>
        <name evidence="10" type="ORF">LAX5112_01676</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 8">Controls the rotational direction of flagella during chemotaxis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cell inner membrane</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 8">Belongs to the FliL family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68211.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671435.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01676"/>
    <dbReference type="EnsemblBacteria" id="CTQ68211">
        <property type="protein sequence ID" value="CTQ68211"/>
        <property type="gene ID" value="LAX5112_01676"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009425">
        <property type="term" value="C:bacterial-type flagellum basal body"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071973">
        <property type="term" value="P:bacterial-type flagellum-dependent cell motility"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006935">
        <property type="term" value="P:chemotaxis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005503">
        <property type="entry name" value="FliL"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35091">
        <property type="entry name" value="PTHR35091"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03748">
        <property type="entry name" value="FliL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="10" id="KW-0966">Cell projection</keyword>
    <keyword evidence="8" id="KW-0145">Chemotaxis</keyword>
    <keyword evidence="10" id="KW-0969">Cilium</keyword>
    <keyword evidence="8" id="KW-0283">Flagellar rotation</keyword>
    <keyword evidence="10" id="KW-0282">Flagellum</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="25"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002254"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008281"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU364125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ68211.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="169" mass="18556" checksum="AB258509DCD471AD" modified="2015-12-09" version="1">MTDENAAAEEDGEEDAAGGGGKKKLILFGAIGLVVLLAVGGGAYYFLFMGDSMPAPAPGEDAPPQQAQRPVVFYDLPEMTVNLATEGRTTYLKVRIALEVENRAMIDQIQPYLPRILDAFQIYLRELRPADLEGSAGLFRLKEELLRRINLSVYPAKVEGVLFKEILVQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A102</accession>
    <name>A0A0M7A102_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">DNA protecting protein DprA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01862</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the DprA/Smf family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68718.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671565.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01862"/>
    <dbReference type="EnsemblBacteria" id="CTQ68718">
        <property type="protein sequence ID" value="CTQ68718"/>
        <property type="gene ID" value="LAX5112_01862"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009294">
        <property type="term" value="P:DNA-mediated transformation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003488">
        <property type="entry name" value="DprA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041614">
        <property type="entry name" value="DprA_WH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43022">
        <property type="entry name" value="PTHR43022"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02481">
        <property type="entry name" value="DNA_processg_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17782">
        <property type="entry name" value="DprA_WH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00732">
        <property type="entry name" value="dprA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DprA_WH" evidence="2">
        <location>
            <begin position="315"/>
            <end position="372"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF17782"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ68718.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="378" mass="40841" checksum="5496D7D63DEF6DA5" modified="2015-12-09" version="1">MRSPAHDKTLCLSEAQRLAWLRLIRSENVGPTTFRDLLNHTGSAEKALQLLPELSRRGGKKSYRLCTQDDAEAELEAHAQSGARLVALGEPEYPPHLRHIDGPPPMLSLKGGSVTARPKTLAIVGARNASLSGRKLAAMFARDLGNAEFVIASGLARGIDAAAHEAALSTGTVAVFAGGIDVLYPSDHDRLLAAILQTGGALISEMPFGWKPRGRDFPRRNRLISGVSLGVIVIEAAKKSGSLHTARFALEQNRDIFAVPGSPLDPRSDGANSLIRQGAALVTNAKDILEDLGNRIEPVLPFDQDLNEPEKDLFSAAQEPDESLRARIISALGPTPVDLDELIRYAEVPPRMVHIILLELELAGRLERHRGNKISLLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1H4</accession>
    <name>A0A0M7A1H4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Glutathione-dependent peroxiredoxin</fullName>
            <ecNumber evidence="3">1.11.1.27</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">LAX5112_01915</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>a hydroperoxide + 2 glutathione = an alcohol + glutathione disulfide + H2O</text>
            <dbReference type="Rhea" id="RHEA:62632"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:30879"/>
            <dbReference type="ChEBI" id="CHEBI:35924"/>
            <dbReference type="ChEBI" id="CHEBI:57925"/>
            <dbReference type="ChEBI" id="CHEBI:58297"/>
            <dbReference type="EC" id="1.11.1.27"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the peroxiredoxin family. Prx5 subfamily.</text>
    </comment>
    <dbReference type="EC" id="1.11.1.27" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68865.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671607.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01915"/>
    <dbReference type="EnsemblBacteria" id="CTQ68865">
        <property type="protein sequence ID" value="CTQ68865"/>
        <property type="gene ID" value="LAX5112_01915"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004601">
        <property type="term" value="F:peroxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd03013">
        <property type="entry name" value="PRX5_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037944">
        <property type="entry name" value="PRX5-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013740">
        <property type="entry name" value="Redoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013766">
        <property type="entry name" value="Thioredoxin_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10430">
        <property type="entry name" value="PTHR10430"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08534">
        <property type="entry name" value="Redoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51352">
        <property type="entry name" value="THIOREDOXIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0049">Antioxidant</keyword>
    <keyword evidence="2 3 5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="1 3 5" id="KW-0575">Peroxidase</keyword>
    <keyword evidence="3" id="KW-0676">Redox-active center</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Thioredoxin" evidence="4">
        <location>
            <begin position="1"/>
            <end position="151"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU366011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ68865.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="180" mass="20169" checksum="F9088945A87D4E75" modified="2015-12-09" version="1">MLGKKVPFVTFRTRVRDESIEGPNPFRWDDKTSDDFFKGKKVVLFSLPGAFTPTCSTYQLPDFEKLFDDFKAEGVDEIYCISVNDAFVMNAWAKAQGVDKVKVIPDGSGEFTRKMGMLVAKDNLGFGMRSWRYGAVVTDGIVEQWFEEEGFSDNCETDPYGVSSPQNILENLKASKAKAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A287</accession>
    <name>A0A0M7A287_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">SnoaL-like domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01856</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68707.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01856"/>
    <dbReference type="EnsemblBacteria" id="CTQ68707">
        <property type="protein sequence ID" value="CTQ68707"/>
        <property type="gene ID" value="LAX5112_01856"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032710">
        <property type="entry name" value="NTF2-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037401">
        <property type="entry name" value="SnoaL-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12680">
        <property type="entry name" value="SnoaL_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54427">
        <property type="entry name" value="SSF54427"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SnoaL-like" evidence="1">
        <location>
            <begin position="17"/>
            <end position="95"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12680"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68707.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="130" mass="14264" checksum="AC04B3F10F7BA5C1" modified="2015-12-09" version="1">MTQMAKYPHEVGVKVGECMEAGDLEGILSLFHPDCVICFPPEEPPKYGHEAVREIFSELIAAKPRIVNRVTGIQECGETALLQHDWRFEDAGGNLIAEGKSTEVVRRLDNGGWGFFIDCPLGPPALATNI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2H8</accession>
    <name>A0A0M7A2H8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Efflux pump membrane transporter</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">bepG_2</name>
        <name evidence="5" type="ORF">LAX5112_02042</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 4">Cell inner membrane</location>
            <topology evidence="2 4">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 4">Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69245.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671727.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02042"/>
    <dbReference type="EnsemblBacteria" id="CTQ69245">
        <property type="protein sequence ID" value="CTQ69245"/>
        <property type="gene ID" value="LAX5112_02042"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015562">
        <property type="term" value="F:efflux transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042908">
        <property type="term" value="P:xenobiotic transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.2090.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027463">
        <property type="entry name" value="AcrB_DN_DC_subdom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001036">
        <property type="entry name" value="Acrflvin-R"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004764">
        <property type="entry name" value="HAE1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32063">
        <property type="entry name" value="PTHR32063"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00873">
        <property type="entry name" value="ACR_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00702">
        <property type="entry name" value="ACRIFLAVINRP"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82714">
        <property type="entry name" value="SSF82714"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00915">
        <property type="entry name" value="2A0602"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="343"/>
            <end position="362"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="369"/>
            <end position="389"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="395"/>
            <end position="416"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="445"/>
            <end position="465"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="471"/>
            <end position="500"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="531"/>
            <end position="554"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="866"/>
            <end position="885"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="892"/>
            <end position="911"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="923"/>
            <end position="941"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="976"/>
            <end position="996"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="1002"/>
            <end position="1026"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010942"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU364070"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ69245.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="1047" mass="113014" checksum="0743CB5B3749E377" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2I0</accession>
    <name>A0A0M7A2I0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Glutaredoxin</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">grxD</name>
        <name evidence="9" type="ORF">LAX5112_01576</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the glutaredoxin family. Monothiol subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67933.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008192765.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01576"/>
    <dbReference type="EnsemblBacteria" id="CTQ67933">
        <property type="protein sequence ID" value="CTQ67933"/>
        <property type="gene ID" value="LAX5112_01576"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051537">
        <property type="term" value="F:2 iron, 2 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0097573">
        <property type="term" value="F:glutathione oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd03028">
        <property type="entry name" value="GRX_PICOT_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002109">
        <property type="entry name" value="Glutaredoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033658">
        <property type="entry name" value="GRX_PICOT-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014434">
        <property type="entry name" value="Monothiol_GRX"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004480">
        <property type="entry name" value="Monothiol_GRX-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10293">
        <property type="entry name" value="PTHR10293"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00462">
        <property type="entry name" value="Glutaredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005894">
        <property type="entry name" value="Monothiol_GRX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00365">
        <property type="entry name" value="TIGR00365"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 7" id="KW-0001">2Fe-2S</keyword>
    <keyword evidence="4 7" id="KW-0408">Iron</keyword>
    <keyword evidence="5 7" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="3 7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glutaredoxin" evidence="8">
        <location>
            <begin position="16"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="29"/>
        </location>
        <ligand>
            <name>[2Fe-2S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:190135"/>
            <note>ligand shared between dimeric partners</note>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022714"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRNR" id="PIRNR005894"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR005894-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00462"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ67933.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="110" mass="12377" checksum="112DF1A21CA3B777" modified="2015-12-09" version="1">MSIQEWIKNEVDTNDVVLFMKGTPNFPQCGFSGQVVQILDYVGAPYKGINVLEDDELRNGIKEFTNWPTIPQLYVKGEFVGGCDIIREMFQNQELQGLMTDKGVQTAQSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A316</accession>
    <name>A0A0M7A316_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Molybdenum cofactor guanylyltransferase</fullName>
            <shortName evidence="4">MoCo guanylyltransferase</shortName>
            <ecNumber evidence="4">2.7.7.77</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">GTP:molybdopterin guanylyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="4">Mo-MPT guanylyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="4">Molybdopterin guanylyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="4">Molybdopterin-guanine dinucleotide synthase</fullName>
            <shortName evidence="4">MGD synthase</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="4 6" type="primary">mobA</name>
        <name evidence="6" type="ORF">LAX5112_01950</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>GTP + H(+) + Mo-molybdopterin = diphosphate + Mo-molybdopterin guanine dinucleotide</text>
            <dbReference type="Rhea" id="RHEA:34243"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
            <dbReference type="ChEBI" id="CHEBI:71302"/>
            <dbReference type="ChEBI" id="CHEBI:71310"/>
            <dbReference type="EC" id="2.7.7.77"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="4">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="4">Monomer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="domain">
        <text evidence="4">The N-terminal domain determines nucleotide recognition and specific binding, while the C-terminal domain determines the specific binding to the target protein.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the MobA family.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.77" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68961.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01950"/>
    <dbReference type="EnsemblBacteria" id="CTQ68961">
        <property type="protein sequence ID" value="CTQ68961"/>
        <property type="gene ID" value="LAX5112_01950"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061603">
        <property type="term" value="F:molybdenum cofactor guanylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006777">
        <property type="term" value="P:Mo-molybdopterin cofactor biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd02503">
        <property type="entry name" value="MobA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00316">
        <property type="entry name" value="MobA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025877">
        <property type="entry name" value="MobA-like_NTP_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013482">
        <property type="entry name" value="Molybde_CF_guanTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12804">
        <property type="entry name" value="NTP_transf_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02665">
        <property type="entry name" value="molyb_mobA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2 4" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="4" id="KW-0460">Magnesium</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3 4" id="KW-0501">Molybdenum cofactor biosynthesis</keyword>
    <keyword evidence="1 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="NTP_transf_3" evidence="5">
        <location>
            <begin position="15"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="18"/>
            <end position="20"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="31"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="59"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="77"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="112"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023150"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF12804"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ68961.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="217" mass="23019" checksum="849F3EAE2D10BB45" modified="2015-12-09" version="1">MTPANARISKDCVLGCVLAGGQSRRMGGGDKTLIDLNGKSMLEIILNRLTPQVSQIVLNANGDPERFAQFQFPVEPDPIGGFAGPLAGVLAGLGHARRNLPHVSHVVSVAGDTPFYPANLVDRFLGAVPGGEPVIALASSSDKLHPVFGLWPVALYNDLHDWLSTGQSGKVLAFVDRHDSIEVGFELDQATGLDPFFNANRPDDLETARNAASLLSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A342</accession>
    <name>A0A0M7A342_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="8 19">Adenosylcobinamide-GDP ribazoletransferase</fullName>
            <ecNumber evidence="7 19">2.7.8.26</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="18 19">Cobalamin synthase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="17 19">Cobalamin-5'-phosphate synthase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="20" type="primary">cobS_1</name>
        <name evidence="19" type="synonym">cobS</name>
        <name evidence="20" type="ORF">LAX5112_01925</name>
    </gene>
    <organism evidence="20 21">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="21" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="21">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="16 19">Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2 19">
            <text>adenosylcob(III)inamide-GDP + alpha-ribazole 5'-phosphate = adenosylcob(III)alamin 5'-phosphate + GMP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:23560"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57918"/>
            <dbReference type="ChEBI" id="CHEBI:58115"/>
            <dbReference type="ChEBI" id="CHEBI:60487"/>
            <dbReference type="ChEBI" id="CHEBI:60493"/>
            <dbReference type="EC" id="2.7.8.26"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 19">
            <text>adenosylcob(III)inamide-GDP + alpha-ribazole = adenosylcob(III)alamin + GMP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:16049"/>
            <dbReference type="ChEBI" id="CHEBI:10329"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:18408"/>
            <dbReference type="ChEBI" id="CHEBI:58115"/>
            <dbReference type="ChEBI" id="CHEBI:60487"/>
            <dbReference type="EC" id="2.7.8.26"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="3 19">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="5 19">Cofactor biosynthesis; adenosylcobalamin biosynthesis; adenosylcobalamin from cob(II)yrinate a,c-diamide: step 7/7.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="19">Cell membrane</location>
            <topology evidence="19">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="4">Membrane</location>
            <topology evidence="4">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6 19">Belongs to the CobS family.</text>
    </comment>
    <dbReference type="EC" id="2.7.8.26" evidence="7 19"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68892.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671616.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01925"/>
    <dbReference type="EnsemblBacteria" id="CTQ68892">
        <property type="protein sequence ID" value="CTQ68892"/>
        <property type="gene ID" value="LAX5112_01925"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00148">
        <property type="reaction ID" value="UER00238"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051073">
        <property type="term" value="F:adenosylcobinamide-GDP ribazoletransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008818">
        <property type="term" value="F:cobalamin 5'-phosphate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009236">
        <property type="term" value="P:cobalamin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00719">
        <property type="entry name" value="CobS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003805">
        <property type="entry name" value="CobS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34148">
        <property type="entry name" value="PTHR34148"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02654">
        <property type="entry name" value="CobS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 19" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="10 19" id="KW-0169">Cobalamin biosynthesis</keyword>
    <keyword evidence="13 19" id="KW-0460">Magnesium</keyword>
    <keyword evidence="15 19" id="KW-0472">Membrane</keyword>
    <keyword evidence="21" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="11 19 20" id="KW-0808">Transferase</keyword>
    <keyword evidence="12 19" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="14 19" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="19">
        <location>
            <begin position="71"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="19">
        <location>
            <begin position="98"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="19">
        <location>
            <begin position="145"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="19">
        <location>
            <begin position="240"/>
            <end position="260"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="19">
        <location>
            <begin position="272"/>
            <end position="290"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000357"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001017"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00004663"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00010561"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00013200"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00015850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022573"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00025228"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00032605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="ARBA" id="ARBA00032853"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00719"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="EMBL" id="CTQ68892.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="21">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="291" mass="30219" checksum="D79CAD96FEEA5CDE" modified="2015-12-09" version="1">MPSENDQNTETASETKPEFSWDHRTNTTAYLAALFSDMAACVRFFSRMPLGKINAADDPAALPEFARISRAAPLAGAFVALPAAGLLLVLGATSLPPLVVAVMAAAVLTIVTGALHEDGLSDVADGFFGGATVARRLDIMKDSRIGAFGAIALVFAIVLKVALIAALLDRFGAADTALLIVTVEAFSRFLMVWQWHRLPLARPDGLGARFGKPSDAALRECVLVMLVLLLPALFALPLQAVGIGIVVGVTAALSVAQVALSKINGTTGDVLGAIQQISGLGFLTGVLMVAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A380</accession>
    <name>A0A0M7A380_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">YciI-like protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02146</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the YciI family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69525.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671801.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ69525">
        <property type="protein sequence ID" value="CTQ69525"/>
        <property type="gene ID" value="LAX5112_02146"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005545">
        <property type="entry name" value="YCII"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03795">
        <property type="entry name" value="YCII"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="YCII" evidence="2">
        <location>
            <begin position="1"/>
            <end position="89"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007689"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF03795"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ69525.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="102" mass="11608" checksum="F8EC496FDB7E92E8" modified="2015-12-09" version="1">MQFVVYAIDKPDALRLRLEVLEAHRHFLGTEPERYGVKVLLSGPLTEDDGSTMRGSFFLLEADNREKIKDMFANDPLQAAGVWAEQQISAVTVRQNNMRTDQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3C2</accession>
    <name>A0A0M7A3C2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Pyridoxal kinase</fullName>
            <ecNumber evidence="1">2.7.1.35</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">pdxY</name>
        <name evidence="3" type="ORF">LAX5112_01989</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.7.1.35" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69117.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671692.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01989"/>
    <dbReference type="EnsemblBacteria" id="CTQ69117">
        <property type="protein sequence ID" value="CTQ69117"/>
        <property type="gene ID" value="LAX5112_01989"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008478">
        <property type="term" value="F:pyridoxal kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009443">
        <property type="term" value="P:pyridoxal 5'-phosphate salvage"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01173">
        <property type="entry name" value="pyridoxal_pyridoxamine_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1190.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013749">
        <property type="entry name" value="PM/HMP-P_kinase-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004625">
        <property type="entry name" value="PyrdxlKinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029056">
        <property type="entry name" value="Ribokinase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10534">
        <property type="entry name" value="PTHR10534"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08543">
        <property type="entry name" value="Phos_pyr_kin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53613">
        <property type="entry name" value="SSF53613"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00687">
        <property type="entry name" value="pyridox_kin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0418">Kinase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Phos_pyr_kin" evidence="2">
        <location>
            <begin position="92"/>
            <end position="268"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012104"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF08543"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ69117.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="300" mass="31297" checksum="4FEB3E54655843DD" modified="2015-12-09" version="1">MTQPPAGFEPATKPILVITSQVVRGGISGRGLTFALERNGHDVWFLPTILLPWHPGQGKGTRIVPPTADFSAIASDLAGSAKLGEIGGIISGYLGSPDQAPAIADLIKTVKTANPDAPYLCDPVMGDHTSASGGGLYVPEATAEAIRDHLVPLADIVTPNSFELGWLTGREISSELEALSAARELGSERVLVTSAPALRRNAISNLLAGPRGAVAAEHAAIANPPHGTGDLMAGLLLINRLAGLDDEEAVKRASASVFELVARSVKKGADELLFADEQQSVVRAMALVTSRRVMEAKVRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3F9</accession>
    <name>A0A0M7A3F9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Universal stress protein F</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">uspF_2</name>
        <name evidence="3" type="ORF">LAX5112_02107</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the universal stress protein A family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69419.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671770.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ69419">
        <property type="protein sequence ID" value="CTQ69419"/>
        <property type="gene ID" value="LAX5112_02107"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006015">
        <property type="entry name" value="Universal_stress_UspA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006016">
        <property type="entry name" value="UspA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00582">
        <property type="entry name" value="Usp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01438">
        <property type="entry name" value="UNVRSLSTRESS"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Usp" evidence="2">
        <location>
            <begin position="1"/>
            <end position="135"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008791"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00582"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ69419.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="136" mass="14635" checksum="2C7CEDD949D9A0C6" modified="2015-12-09" version="1">MYKHVLIPVALDHETLIARKLENARHLIAGGGQITLLTVLESIPGFVSEFVTMKVDNHLTTKVENKLREAAGGDDSIQCKVVSGKPGVQIAAFAEDNGVDLIIVGSHHPSAQDYFLGSTASRVVRRAGCSVFVVRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3L4</accession>
    <name>A0A0M7A3L4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Indoleacetamide hydrolase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">gatA_2</name>
        <name evidence="5" type="ORF">LAX5112_01694</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Hydrolyzes indole-3-acetamide (IAM) into indole-3-acetic acid (IAA).</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the amidase family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68323.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671468.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01694"/>
    <dbReference type="EnsemblBacteria" id="CTQ68323">
        <property type="protein sequence ID" value="CTQ68323"/>
        <property type="gene ID" value="LAX5112_01694"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016874">
        <property type="term" value="F:ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1300.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000120">
        <property type="entry name" value="Amidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020556">
        <property type="entry name" value="Amidase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023631">
        <property type="entry name" value="Amidase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036928">
        <property type="entry name" value="AS_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11895">
        <property type="entry name" value="PTHR11895"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01425">
        <property type="entry name" value="Amidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75304">
        <property type="entry name" value="SSF75304"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00571">
        <property type="entry name" value="AMIDASES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0436">Ligase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Amidase" evidence="4">
        <location>
            <begin position="26"/>
            <end position="446"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003871"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009199"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00021874"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF01425"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ68323.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="468" mass="49936" checksum="6DD1D2EC041A83CC" modified="2015-12-09" version="1">MSDTIAFQDIRSLKALMDAGEITPGELVAMFAGRISRYNGVSRAFITVTEDAAAAEAASLSREDLAKSPIAGIPYACKDLFDVKDVLTTAGSRVFHDRIAAEDAYAVACLRNAGALNLGKTNLHEFAYGATGENEVYGTCVNAYDTTRLAGGSSSGSAAAIAFGLVPAALGTDTGGSVRAPAVLNGLVGLKPTIGRVPTSGIVPYCWTLDHVGLMTRTIADCADILGLVAGHDPQDPASVNLPGENYPEALGQDISGLRIGIPANFFFERSDPEILETLERVKAFLVAQGAELVPITFPDMEHTRTVSLTVQLPEALSAHSAHLQARGELYGKDFRAGLALGQCLLAEHYVKAKRFIERYRQQTTALFDDVDLILTPATPEIAQKIGTVMVTRDGVDEAIGNAITRFTTFFNMTGHPALTMPCGLHSEGLPIGLQLVGRYFDEKSLFRVAHVIERHDAFSIPLPKVDS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A451</accession>
    <name>A0A0M7A451_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">ATP12 chaperone protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_01763</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Mitochondrion</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ATP12 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68503.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671492.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01763"/>
    <dbReference type="EnsemblBacteria" id="CTQ68503">
        <property type="protein sequence ID" value="CTQ68503"/>
        <property type="gene ID" value="LAX5112_01763"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043461">
        <property type="term" value="P:proton-transporting ATP synthase complex assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3580.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.2180.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011419">
        <property type="entry name" value="ATP12_ATP_synth-F1-assembly"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042272">
        <property type="entry name" value="ATP12_ATP_synth-F1-assembly_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023335">
        <property type="entry name" value="ATP12_ortho_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21013">
        <property type="entry name" value="PTHR21013"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07542">
        <property type="entry name" value="ATP12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0143">Chaperone</keyword>
    <keyword evidence="4" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0809">Transit peptide</keyword>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004173"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008231"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ68503.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="257" mass="28485" checksum="2EEE49DD5BC46BDA" modified="2015-12-09" version="1">MRDYLEALHEDAAKDPEQRARELSRRELPKRFYKSAEHIETEDGFAIHLDGRPVKTPAKSTLLLPTEVLGAAVAAEWDAQEKEINPGRMPLTRIANSAQDAVANRFGEVADDITGFAGNDALCYRADDPESLCDTQRRVWDPVVEWAGDQLSGRFVLIEGIMHTPQDQALLTAFRTRIGDDSPLRLAGLHTVTTLTGSALLALALRDGFLDADSVWTAAHVEEDFNIERWGEDAEAKQIRTYKRSEFDAAALVLANA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5G9</accession>
    <name>A0A0M7A5G9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Bacteriophytochrome cph2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">cph2_11</name>
        <name evidence="4" type="ORF">LAX5112_02486</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70375.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672073.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02486"/>
    <dbReference type="EnsemblBacteria" id="CTQ70375">
        <property type="protein sequence ID" value="CTQ70375"/>
        <property type="gene ID" value="LAX5112_02486"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01948">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01949">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.450">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001633">
        <property type="entry name" value="EAL_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035919">
        <property type="entry name" value="EAL_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000160">
        <property type="entry name" value="GGDEF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00563">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00990">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00052">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00267">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141868">
        <property type="entry name" value="SSF141868"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00254">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50883">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50887">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="279"/>
            <end position="303"/>
        </location>
    </feature>
    <feature type="domain" description="GGDEF" evidence="3">
        <location>
            <begin position="342"/>
            <end position="475"/>
        </location>
    </feature>
    <feature type="domain" description="EAL" evidence="2">
        <location>
            <begin position="484"/>
            <end position="739"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ70375.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="752" mass="82125" checksum="2EE1D13D578D049C" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5I7</accession>
    <name>A0A0M7A5I7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Deoxyribodipyrimidine photo-lyase</fullName>
            <ecNumber evidence="8">4.1.99.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">phrA</name>
        <name evidence="8" type="ORF">LAX5112_01962</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>(6R)-5,10-methylene-5,6,7,8-tetrahydrofolate</name>
            <dbReference type="ChEBI" id="CHEBI:15636"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the DNA photolyase family.</text>
    </comment>
    <dbReference type="EC" id="4.1.99.3" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68993.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671643.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01962"/>
    <dbReference type="EnsemblBacteria" id="CTQ68993">
        <property type="protein sequence ID" value="CTQ68993"/>
        <property type="gene ID" value="LAX5112_01962"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003904">
        <property type="term" value="F:deoxyribodipyrimidine photo-lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901363">
        <property type="term" value="F:heterocyclic compound binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0097159">
        <property type="term" value="F:organic cyclic compound binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051716">
        <property type="term" value="P:cellular response to stimulus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006139">
        <property type="term" value="P:nucleobase-containing compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006950">
        <property type="term" value="P:response to stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036134">
        <property type="entry name" value="Crypto/Photolyase_FAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036155">
        <property type="entry name" value="Crypto/Photolyase_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005101">
        <property type="entry name" value="Cryptochr/Photolyase_FAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002081">
        <property type="entry name" value="Cryptochrome/DNA_photolyase_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018394">
        <property type="entry name" value="DNA_photolyase_1_CS_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006050">
        <property type="entry name" value="DNA_photolyase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11455">
        <property type="entry name" value="PTHR11455"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00875">
        <property type="entry name" value="DNA_photolyase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03441">
        <property type="entry name" value="FAD_binding_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00147">
        <property type="entry name" value="DNAPHOTLYASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48173">
        <property type="entry name" value="SSF48173"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52425">
        <property type="entry name" value="SSF52425"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00394">
        <property type="entry name" value="DNA_PHOTOLYASES_1_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51645">
        <property type="entry name" value="PHR_CRY_ALPHA_BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0157">Chromophore</keyword>
    <keyword evidence="4 6" id="KW-0274">FAD</keyword>
    <keyword evidence="3 6" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="8" id="KW-0456">Lyase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Photolyase/cryptochrome alpha/beta" evidence="7">
        <location>
            <begin position="1"/>
            <end position="127"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022991"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU004182"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51645"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ68993.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="478" mass="54323" checksum="67BA5229DB8D6341" modified="2015-12-09" version="1">MTTIVWFRQDLRVSDNPALHEATRRGPVLPVYILETPDQSGDEHPLGGASRWWLHHSLVALKEDLPGLVFLRGSARHLIPELVQDTGADAVYWNRCYEPHAIERDSALKEALKTDLIDAKSFKASLLFEPWDVETKTGGPYKVYSPFWKAAQKISVPDPLPAPAEINFTAYDRGDSLSDLELLPTKPNWAEGWEDIWQPGEAGAKDRLIEFLDHGLSGYGDKRNRPDLPNVSRLSPHLHFGDISPRQVWSATQHATDRKSSLSSDGHKFLSEIAWREFSYHLLYHFPQLPEKNWRPAFDAYPWRESEEDLNKWQMGLTGYPMVDAGMRELWQTGYMHNRVRMLAGSFLVKHLRLHWKHGETWFRDTLVDADLANNSASWQWVAGSGADAAPYFRIFNPISQGPKFDPDGKYVRRWVPELAKLPTKHLFSPFEAPASVLRDAGVRLGDTYPYPIVDHGKARQAALAGYEDVKTAVQDAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5S4</accession>
    <name>A0A0M7A5S4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Methyl-accepting chemotaxis protein 4</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">mcp4_7</name>
        <name evidence="8" type="ORF">LAX5112_02304</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ69967.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671939.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02304"/>
    <dbReference type="EnsemblBacteria" id="CTQ69967">
        <property type="protein sequence ID" value="CTQ69967"/>
        <property type="gene ID" value="LAX5112_02304"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033480">
        <property type="entry name" value="sCache_2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17200">
        <property type="entry name" value="sCache_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01049">
        <property type="entry name" value="Cache_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="6">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809138" evidence="6">
        <location>
            <begin position="25"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="domain" description="Cache_2" evidence="7">
        <location>
            <begin position="19"/>
            <end position="106"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="SMART" id="SM01049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ69967.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="152" mass="15948" checksum="B4E69A7264C83FF0" modified="2015-12-09" version="1">MIKSKIAVLLITGLSMAGSTTAFAAERGSADEATAMLDKAVAHYQSAGADTALADFSATDKGWQDRDLYVFCFDDAGVTVAHGANAKLIGRDLSGLKDADGKEFVMELVSTGKSGGGWVDYRWPNPVSKKIEPKSSVVKSAGDHICGVGIYK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="31" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A620</accession>
    <name>A0A0M7A620_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">50S ribosomal subunit assembly factor BipA</fullName>
            <ecNumber evidence="3">3.6.5.-</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">GTP-binding protein BipA</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5" type="primary">typA</name>
        <name evidence="3" type="synonym">bipA</name>
        <name evidence="5" type="ORF">LAX5112_02284</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">A 50S ribosomal subunit assembly protein with GTPase activity, required for 50S subunit assembly at low temperatures, may also play a role in translation. Binds GTP and analogs. Binds the 70S ribosome between the 30S and 50S subunits, in a similar position as ribosome-bound EF-G; it contacts a number of ribosomal proteins, both rRNAs and the A-site tRNA.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>GTP + H2O = GDP + H(+) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:19669"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58189"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="3">Monomer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cytoplasm</location>
        </subcellularLocation>
        <text evidence="3">Binds to ribosomes.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. BipA subfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.5.-" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69866.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671895.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02284"/>
    <dbReference type="EnsemblBacteria" id="CTQ69866">
        <property type="protein sequence ID" value="CTQ69866"/>
        <property type="gene ID" value="LAX5112_02284"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043022">
        <property type="term" value="F:ribosome binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000027">
        <property type="term" value="P:ribosomal large subunit assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd03710">
        <property type="entry name" value="BipA_TypA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.250">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00849">
        <property type="entry name" value="BipA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035651">
        <property type="entry name" value="BipA_V"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035647">
        <property type="entry name" value="EFG_III/V"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000640">
        <property type="entry name" value="EFG_V-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004161">
        <property type="entry name" value="EFTu-like_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031157">
        <property type="entry name" value="G_TR_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005225">
        <property type="entry name" value="Small_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000795">
        <property type="entry name" value="T_Tr_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009000">
        <property type="entry name" value="Transl_B-barrel_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042116">
        <property type="entry name" value="TypA/BipA_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006298">
        <property type="entry name" value="TypA_GTP-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42908:SF8">
        <property type="entry name" value="PTHR42908:SF8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00679">
        <property type="entry name" value="EFG_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00009">
        <property type="entry name" value="GTP_EFTU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03144">
        <property type="entry name" value="GTP_EFTU_D2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00315">
        <property type="entry name" value="ELONGATNFCT"/>
    </dbReference>
    <dbReference type="SMART" id="SM00838">
        <property type="entry name" value="EFG_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50447">
        <property type="entry name" value="SSF50447"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54980">
        <property type="entry name" value="SSF54980"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00231">
        <property type="entry name" value="small_GTP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01394">
        <property type="entry name" value="TypA_BipA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00301">
        <property type="entry name" value="G_TR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51722">
        <property type="entry name" value="G_TR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2 3" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="1" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0690">Ribosome biogenesis</keyword>
    <keyword evidence="3" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="3" id="KW-0699">rRNA-binding</keyword>
    <keyword evidence="3" id="KW-0820">tRNA-binding</keyword>
    <feature type="domain" description="Tr-type G" evidence="4">
        <location>
            <begin position="1"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="13"/>
            <end position="18"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="126"/>
            <end position="129"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ69866.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="607" mass="66694" checksum="EF2A02E527F1FB3F" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6W7</accession>
    <name>A0A0M7A6W7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 6">Cell division protein FtsA</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 8" type="primary">ftsA</name>
        <name evidence="8" type="ORF">LAX5112_02620</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5 6">Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Self-interacts. Interacts with FtsZ.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Peripheral membrane protein</topology>
            <orientation evidence="5">Cytoplasmic side</orientation>
        </subcellularLocation>
        <text evidence="5">Localizes to the Z ring in an FtsZ-dependent manner. Targeted to the membrane through a conserved C-terminal amphipathic helix.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5 6">Belongs to the FtsA/MreB family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70818.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040450856.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02620"/>
    <dbReference type="EnsemblBacteria" id="CTQ70818">
        <property type="protein sequence ID" value="CTQ70818"/>
        <property type="gene ID" value="LAX5112_02620"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032153">
        <property type="term" value="C:cell division site"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009898">
        <property type="term" value="C:cytoplasmic side of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043093">
        <property type="term" value="P:FtsZ-dependent cytokinesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02033">
        <property type="entry name" value="FtsA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020823">
        <property type="entry name" value="Cell_div_FtsA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003494">
        <property type="entry name" value="SHS2_FtsA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02491">
        <property type="entry name" value="SHS2_FTSA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF003101">
        <property type="entry name" value="FtsA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00842">
        <property type="entry name" value="FtsA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="SSF53067"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01174">
        <property type="entry name" value="ftsA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5 6" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="2 5 6" id="KW-0132">Cell division</keyword>
    <keyword evidence="1 5" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="3 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FtsA" evidence="7">
        <location>
            <begin position="24"/>
            <end position="220"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRNR" id="PIRNR003101"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="SMART" id="SM00842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ70818.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="440" mass="47077" checksum="87CB0194029062F1" modified="2015-12-09" version="1">MSRSDQPLYLPKMRPLPSRRSVVMSVLDVGSTKICCLIAKLIPQDDNAILSSRSHKVEVLGYGYQRSRGIKSGVVVDMDAAEHAIRLAVDSAERMAGVTVESLITNISCGRLQSEIYSASVPLSGESVCEADIQRVLSAGSSHSVTDGRAVTHALPISYTLDGSRGIRDPRGMMGHKLGVDMQVVTAEVPPVRNLEHCINRGHLHVETMVATPFASGLSTIVDDEAELGVACIDMGGGTTTLSVFVDGHMVHLDAIAVGGNHVTMDIARAFATRLQDAERLKTLYGSPLASGSDERDMLTVPALESDSDLPNQIPRSALTRVIRPRVEEILELVRDRLTASGFAGRVGKQIVLTGGASQLTGLGEVARHILGRNVRLGRPLGVAGLPEAAKGPAFAAAVGLLIYPQVAQIEQFEHKNRRSGWGGQSGYLARVGQWIRESF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8B2</accession>
    <name>A0A0M7A8B2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Trehalose transport system permease protein SugA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">sugA_1</name>
        <name evidence="7" type="ORF">LAX5112_02564</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70656.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008190077.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02564"/>
    <dbReference type="EnsemblBacteria" id="CTQ70656">
        <property type="protein sequence ID" value="CTQ70656"/>
        <property type="gene ID" value="LAX5112_02564"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="7"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="69"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="100"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="149"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="207"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="256"/>
            <end position="278"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="65"/>
            <end position="277"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ70656.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="288" mass="32545" checksum="B00B03C2C1C98C66" modified="2015-12-09" version="1">MKTQNQRAWFFVLPVLLLVAFNALIPMMTVVNYSVQETFGDNLFFWEGLRWFQEVLQSERFHNALGRQFFFTFMILIIEIPLGIAIALSMPKKGPWVPVCLVLMALPMLIPWNVVGAMWNIFTLPDIGLLGYFLNHTLGISYDMTQDPVAAWVTIIVMDVWHWTSLVVLLSYAGLVSIPNAYYQAAEIDGASNWAVFRFIQLPKMKTVLTIAILLRFMDSFNIYTEPFVLTGGGPGNSTTLLSIDLVKIALGQFDLGPAAAMSLIYFAITLLTSWLFYTLMTKDDNKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8C5</accession>
    <name>A0A0M7A8C5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">TRAP-type mannitol/chloroaromatic compound transport system, small permease component</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">LAX5112_02581</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70702.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672169.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02581"/>
    <dbReference type="EnsemblBacteria" id="CTQ70702">
        <property type="protein sequence ID" value="CTQ70702"/>
        <property type="gene ID" value="LAX5112_02581"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007387">
        <property type="entry name" value="TRAP_DctQ"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35011">
        <property type="entry name" value="PTHR35011"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04290">
        <property type="entry name" value="DctQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="51"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="93"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="135"/>
            <end position="158"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ70702.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="185" mass="19564" checksum="AB58C902C40D2598" modified="2015-12-09" version="1">MRNALNGLYKTATVLAACCLVTIALLVSLQVMGRLLDGARGLVGLEPLGLLVPSLAEIAGFFLVGASFLALAGTLRNGDHIRVSILLQGVGPAVARLLNIWALAVAFALAAFFTWHALALVLDSYRYNEVSFGIIPIPLMFPQAVMTLGLFVLAIALLDDLVTSLTGKAPSYETVVRDDPIEGSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8P8</accession>
    <name>A0A0M7A8P8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Leucine-responsive regulatory protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">lrp_8</name>
        <name evidence="5" type="ORF">LAX5112_02677</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70987.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02677"/>
    <dbReference type="EnsemblBacteria" id="CTQ70987">
        <property type="protein sequence ID" value="CTQ70987"/>
        <property type="gene ID" value="LAX5112_02677"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000485">
        <property type="entry name" value="AsnC-type_HTH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019888">
        <property type="entry name" value="Tscrpt_reg_AsnC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019887">
        <property type="entry name" value="Tscrpt_reg_AsnC/Lrp_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01037">
        <property type="entry name" value="AsnC_trans_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00033">
        <property type="entry name" value="HTHASNC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00344">
        <property type="entry name" value="HTH_ASNC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50956">
        <property type="entry name" value="HTH_ASNC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH asnC-type" evidence="4">
        <location>
            <begin position="14"/>
            <end position="75"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50956"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ70987.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="172" mass="19600" checksum="82548A6E964881AF" modified="2015-12-09" version="1">MSRPNYVQRNIMILDRLDRKILNVLQRDGRIANADLAEKIGLSPSACLRRMRALEEARVIDSYVALLDQRKLGRRMDVFVEISLTGQSKETLESFERAVARSEEIMECFLMAGDADYILRLTAADPIDFERIHRDHLSQLPGVLRMKSSFAIRPIVKRTALPLSETADAADR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9J3</accession>
    <name>A0A0M7A9J3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02496</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70403.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672079.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02496"/>
    <dbReference type="EnsemblBacteria" id="CTQ70403">
        <property type="protein sequence ID" value="CTQ70403"/>
        <property type="gene ID" value="LAX5112_02496"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1890">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007410">
        <property type="entry name" value="PCuAC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036182">
        <property type="entry name" value="PCuAC_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36302">
        <property type="entry name" value="PTHR36302"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04314">
        <property type="entry name" value="PCuAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF110087">
        <property type="entry name" value="SSF110087"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809309" evidence="1">
        <location>
            <begin position="23"/>
            <end position="169"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70403.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="169" mass="17660" checksum="8BB46AAABDDF212B" modified="2015-12-09" version="1">MKLWTSVAAAAALSFVSMTAVAADYSAGSLELSNAWTRATPPKAKAGGGFIEIVNTGTEADRLVAANSGVSKKVELHEMAVTDGVMKMREMENGIEIPAGETVSLMPGGLHIMFMGLNKSFEEGTSVPVVLTFEKAGDVAVELPVAKMGAKAMDHGKMDHSGHDHGKTN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AA33</accession>
    <name>A0A0M7AA33_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Gamma-glutamylputrescine oxidoreductase</fullName>
            <ecNumber evidence="3">1.4.3.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">puuB_3</name>
        <name evidence="3" type="ORF">LAX5112_02525</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.4.3.-" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70484.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672098.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02525"/>
    <dbReference type="EnsemblBacteria" id="CTQ70484">
        <property type="protein sequence ID" value="CTQ70484"/>
        <property type="gene ID" value="LAX5112_02525"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006076">
        <property type="entry name" value="FAD-dep_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01266">
        <property type="entry name" value="DAO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="29"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="domain" description="DAO" evidence="2">
        <location>
            <begin position="36"/>
            <end position="395"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01266"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ70484.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="440" mass="48639" checksum="A8B49DBF31263FBA" modified="2015-12-09" version="1">MLQKTQDQRQLAGSYWEASRPALRTDRQLMGNALFDVAVIGAGFAGLSAAMKLAAAGVSVCVLEAEHVGYGASGRNGGFCCLGGTKLSVHQLVRRFGLEEARKFLAYQVAGINQVAQRLETWGIDADCHSKGEITLAHRPKDLDGLRAEAAYLKENFGIKSQVLDKAALDEEGYGGPGFHGGLHIPYGFALNPMAYLYGLADQVRRKGGRIYGKSPVNGMSRDGDRWRLDTEHGFVRAKGVVLAGNGYAKETVPKWMHGRTLPVMSSIHVTRPMSEDELSAQGWTSETMASDSRILLHYFRLMPDRRFLFGTRGGIFETEPSLKAMHKRARQDFESMFPAWENVESEYQWYGRVCLSRNLTPFVGEIPGMDGVYAAMGWHGSGIAMASLSGEKAAGLILGTVRPEDLPAALQQPFKRFPLPSLRKLYLQGAYWWYGYQDR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAJ0</accession>
    <name>A0A0M7AAJ0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Putative L,D-transpeptidase ErfK/SrfK</fullName>
            <ecNumber evidence="6">2.-.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">erfK_4</name>
        <name evidence="6" type="ORF">LAX5112_03079</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Cell wall biogenesis; peptidoglycan biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the YkuD family.</text>
    </comment>
    <dbReference type="EC" id="2.-.-.-" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72165.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672567.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03079"/>
    <dbReference type="EnsemblBacteria" id="CTQ72165">
        <property type="protein sequence ID" value="CTQ72165"/>
        <property type="gene ID" value="LAX5112_03079"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00219"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071972">
        <property type="term" value="F:peptidoglycan L,D-transpeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd16913">
        <property type="entry name" value="YkuD_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.440.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005490">
        <property type="entry name" value="LD_TPept_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006311">
        <property type="entry name" value="TAT_signal"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038063">
        <property type="entry name" value="Transpep_catalytic_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03734">
        <property type="entry name" value="YkuD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141523">
        <property type="entry name" value="SSF141523"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <keyword evidence="3 6" id="KW-0808">Transferase</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809196" evidence="4">
        <location>
            <begin position="28"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="domain" description="YkuD" evidence="5">
        <location>
            <begin position="73"/>
            <end position="205"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004752"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF03734"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ72165.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="214" mass="24303" checksum="DAF877B03E3C9800" modified="2015-12-09" version="1">MEFDRRTLLMGATVVAGTMALPATARASAAANAYFTGYQDDNGYRYRRTNFKKIDPVWHRQMVKYFSPEPPGTVVIDTNNHFLYWVWENNTALRYGVGVGREGFKWYGRARIDRKALWPRWVPPPEMLKRQPELPRKVDGGAANNPLGPRALYLYRDGVDLGYRLHSTLEPWSIGHDVSSGCIRMFPEDVIDLYQRCPKGTGVLVLEHLGANAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAX6</accession>
    <name>A0A0M7AAX6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">L-2,4-diaminobutyrate decarboxylase</fullName>
            <ecNumber evidence="5">4.1.1.86</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ddc</name>
        <name evidence="5" type="ORF">LAX5112_02886</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 3 4">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the group II decarboxylase family.</text>
    </comment>
    <dbReference type="EC" id="4.1.1.86" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71622.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672401.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02886"/>
    <dbReference type="EnsemblBacteria" id="CTQ71622">
        <property type="protein sequence ID" value="CTQ71622"/>
        <property type="gene ID" value="LAX5112_02886"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033983">
        <property type="term" value="F:diaminobutyrate decarboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019752">
        <property type="term" value="P:carboxylic acid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002129">
        <property type="entry name" value="PyrdxlP-dep_de-COase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00282">
        <property type="entry name" value="Pyridoxal_deC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 4 5" id="KW-0456">Lyase</keyword>
    <keyword evidence="3 4" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="modified residue" description="N6-(pyridoxal phosphate)lysine" evidence="3">
        <location>
            <position position="231"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR602129-50"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU000382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ71622.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="382" mass="40695" checksum="0D8A3BB53F4FB4B4" modified="2015-12-09" version="1">MADLSELTDQLPAKGLGDDEAFSVLSEQVRTRSAHLGAPDAFAHMDPAPAGIAARLVGLNAEYNQNLLHPDLSPFATEAEARVIVWLAPYFGMTAGHMCGGSTLANLAALWCAREHGATRVIASADAHVSVPKCAQILGLPFEPVIVAENGRMTIDALPELSRAVLVLTAGTTGRGVIDELKIASLKGGTCAGPMWVHVDAAWGGPLRLTKYEDRLSGIERADSIAVSAHKWLFQPKDSALVFFADPTAQEAIAFGSSYLATPNIGVQGSRSAAGIALLGTLLAWGQEGLAKRIETGMAQSEDLARRLQEDSRTELKQFPETGVVNWRSLLRDTETVISELGPVASRTAIEGEPWVRQVAANMHADIDVVWARISRVLGPPD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AC46</accession>
    <name>A0A0M7AC46_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 7">Chaperone protein DnaK</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">HSP70</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">Heat shock 70 kDa protein</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">Heat shock protein 70</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="primary">dnaK_1</name>
        <name evidence="7" type="synonym">dnaK</name>
        <name evidence="11" type="ORF">LAX5112_02778</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Acts as a chaperone.</text>
    </comment>
    <comment type="induction">
        <text evidence="7">By stress conditions e.g. heat shock.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 7 8">Belongs to the heat shock protein 70 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71313.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672330.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02778"/>
    <dbReference type="EnsemblBacteria" id="CTQ71313">
        <property type="protein sequence ID" value="CTQ71313"/>
        <property type="gene ID" value="LAX5112_02778"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140662">
        <property type="term" value="F:ATP-dependent protein folding chaperone"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051082">
        <property type="term" value="F:unfolded protein binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1270.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.34.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00332">
        <property type="entry name" value="DnaK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012725">
        <property type="entry name" value="Chaperone_DnaK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018181">
        <property type="entry name" value="Heat_shock_70_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029048">
        <property type="entry name" value="HSP70_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029047">
        <property type="entry name" value="HSP70_peptide-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013126">
        <property type="entry name" value="Hsp_70_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19375">
        <property type="entry name" value="PTHR19375"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00012">
        <property type="entry name" value="HSP70"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100920">
        <property type="entry name" value="SSF100920"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100934">
        <property type="entry name" value="SSF100934"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="SSF53067"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02350">
        <property type="entry name" value="prok_dnaK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00297">
        <property type="entry name" value="HSP70_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00329">
        <property type="entry name" value="HSP70_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01036">
        <property type="entry name" value="HSP70_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="evidence at transcript level"/>
    <keyword evidence="5 7 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7" id="KW-0143">Chaperone</keyword>
    <keyword evidence="9" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4 7 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3 7" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 7 11" id="KW-0346">Stress response</keyword>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="529"/>
            <end position="550"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="600"/>
            <end position="640"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="9">
        <location>
            <begin position="247"/>
            <end position="274"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="10">
        <location>
            <begin position="615"/>
            <end position="630"/>
        </location>
    </feature>
    <feature type="modified residue" description="Phosphothreonine; by autocatalysis" evidence="7">
        <location>
            <position position="198"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007381"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00014415"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00332"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU003322"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ71313.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="640" mass="68670" checksum="89A22C51B3F50FD1" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AC95</accession>
    <name>A0A0M7AC95_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Phosphoserine transaminase</fullName>
            <ecNumber evidence="6">2.6.1.52</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">serC</name>
        <name evidence="9" type="ORF">LAX5112_03203</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>2-oxoglutarate + 4-(phosphooxy)-L-threonine = (R)-3-hydroxy-2-oxo-4-phosphooxybutanoate + L-glutamate</text>
            <dbReference type="Rhea" id="RHEA:16573"/>
            <dbReference type="ChEBI" id="CHEBI:16810"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:58452"/>
            <dbReference type="ChEBI" id="CHEBI:58538"/>
            <dbReference type="EC" id="2.6.1.52"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>2-oxoglutarate + O-phospho-L-serine = 3-phosphooxypyruvate + L-glutamate</text>
            <dbReference type="Rhea" id="RHEA:14329"/>
            <dbReference type="ChEBI" id="CHEBI:16810"/>
            <dbReference type="ChEBI" id="CHEBI:18110"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:57524"/>
            <dbReference type="EC" id="2.6.1.52"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="3">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="4">Amino-acid biosynthesis; L-serine biosynthesis; L-serine from 3-phospho-D-glycerate: step 2/3.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.6.1.52" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72499.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672638.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03203"/>
    <dbReference type="EnsemblBacteria" id="CTQ72499">
        <property type="protein sequence ID" value="CTQ72499"/>
        <property type="gene ID" value="LAX5112_03203"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00135">
        <property type="reaction ID" value="UER00197"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004648">
        <property type="term" value="F:O-phospho-L-serine:2-oxoglutarate aminotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006564">
        <property type="term" value="P:L-serine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022278">
        <property type="entry name" value="Pser_aminoTfrase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006271">
        <property type="entry name" value="Pser_aminoTfrase_methanosarc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000525">
        <property type="entry name" value="SerC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01365">
        <property type="entry name" value="serC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="9" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0718">Serine biosynthesis</keyword>
    <keyword evidence="9" id="KW-0808">Transferase</keyword>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001607"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001871"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00005099"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00006904"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00013030"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023299"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ72499.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="392" mass="42416" checksum="3F676FBA98D3B9EB" modified="2015-12-09" version="1">MSIVISKPDVRPANPNFSSGPCSKRPGWSLEALSDAPLGRSHRAKPGKAKLAEAIELTRKVLNVPDDYRIGIVPASDTGAVEMAMWSLLGARGVDMLAWESFGSGWVTDVVKQLKLENVRKIEAPYGELPDLSTVDFSNDVVFTWNGTTSGVRVPDGDWIPANREGLTICDATSAAFAQELDFAKLDVVTFSWQKVLGGEAAHGMLILSPRAVERLETYSSAWPLPKIFRLTKGGKLIEGIFRGETINTPSMLCVEDYLDALKWAEDLGGLAGLVARADGNLEVLADWVDQTSWVDFLPKDPATRSNTSVCLTVVDPDILALSDEQQAAFAKGMVSMLDSEGVAYDIGAYRDAPSGLRIWAGATVEASDLKALTSWLDWAFQTEKAKHAQAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACG1</accession>
    <name>A0A0M7ACG1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Minor extracellular protease vpr</fullName>
            <ecNumber evidence="7">3.4.21.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">vpr</name>
        <name evidence="7" type="ORF">LAX5112_03291</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the peptidase S8 family.</text>
    </comment>
    <dbReference type="EC" id="3.4.21.-" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72768.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672717.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03291"/>
    <dbReference type="EnsemblBacteria" id="CTQ72768">
        <property type="protein sequence ID" value="CTQ72768"/>
        <property type="gene ID" value="LAX5112_03291"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004252">
        <property type="term" value="F:serine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.200">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000209">
        <property type="entry name" value="Peptidase_S8/S53_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036852">
        <property type="entry name" value="Peptidase_S8/S53_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023827">
        <property type="entry name" value="Peptidase_S8_Asp-AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022398">
        <property type="entry name" value="Peptidase_S8_His-AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023828">
        <property type="entry name" value="Peptidase_S8_Ser-AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015500">
        <property type="entry name" value="Peptidase_S8_subtilisin-rel"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00082">
        <property type="entry name" value="Peptidase_S8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00723">
        <property type="entry name" value="SUBTILISIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52743">
        <property type="entry name" value="SSF52743"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00136">
        <property type="entry name" value="SUBTILASE_ASP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00137">
        <property type="entry name" value="SUBTILASE_HIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00138">
        <property type="entry name" value="SUBTILASE_SER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5 7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 5 7" id="KW-0645">Protease</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0720">Serine protease</keyword>
    <feature type="domain" description="Peptidase_S8" evidence="6">
        <location>
            <begin position="182"/>
            <end position="492"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00011073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU003355"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00082"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ72768.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="520" mass="55646" checksum="E2E38FBF079F83A5" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACX0</accession>
    <name>A0A0M7ACX0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative efflux pump membrane fusion protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03371</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72928.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672780.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03371"/>
    <dbReference type="EnsemblBacteria" id="CTQ72928">
        <property type="protein sequence ID" value="CTQ72928"/>
        <property type="gene ID" value="LAX5112_03371"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039562">
        <property type="entry name" value="MFP_biotin_lipoyl_2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13533">
        <property type="entry name" value="Biotin_lipoyl_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Biotin_lipoyl_2" evidence="2">
        <location>
            <begin position="47"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="131"/>
            <end position="152"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13533"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ72928.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="318" mass="33731" checksum="6977F0CE5BCABD5F" modified="2015-12-09" version="1">MPLSPTRLLIAGALAFSLSACNQDDGSVALGTLERDRVALTATAAEVLVALPVPQGSPVTKGTVLARLDATQQQAVVNQAAAEVEKSRANLEKLENGARQEEIAKAEAAVAGAKAELVEAENNFERYQDLTTRGTTSQAQLDSARASRDAADASLNSAEQQLLELVTGTRPEDLEMARAELAAAEASLATQQKILSDLTIVASRDGVLDSLPWNLGERVTVGSPVAVMLAGDAPYARVYVPEPHRVKINEGDTLSIRVDGLDDPIDGHVRWISSEPSFTPYYALNQSDRARLMYVAEIQLPDSASDLPNGVPAQAVLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACZ2</accession>
    <name>A0A0M7ACZ2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putrescine oxidase</fullName>
            <ecNumber evidence="2">1.4.3.10</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">puo_2</name>
        <name evidence="2" type="ORF">LAX5112_02849</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.4.3.10" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71514.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02849"/>
    <dbReference type="EnsemblBacteria" id="CTQ71514">
        <property type="protein sequence ID" value="CTQ71514"/>
        <property type="gene ID" value="LAX5112_02849"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050232">
        <property type="term" value="F:putrescine oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002937">
        <property type="entry name" value="Amino_oxidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01593">
        <property type="entry name" value="Amino_oxidase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Amino_oxidase" evidence="1">
        <location>
            <begin position="71"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="domain" description="Amino_oxidase" evidence="1">
        <location>
            <begin position="161"/>
            <end position="413"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01593"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71514.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="430" mass="46754" checksum="90262D419D85F095" modified="2015-12-09" version="1">MFLLWVQIINYAILRALFPCEDLTKTGLNNHAIHIAAEREWFAYGHFFILAQQVPLMSEHSTDIAIIGAGLCGLATAALLSSLGVDARVFEASKTAGGRIRSLPGPSSPDLRYDLGPAWIWPHNQRMLQLAEQLDLPLMRQHSAGNLIFQDQTGSIRRDLAFATMGDALRIPGGLARISDGLAARLSDGTVAYQHAVTAIEQDTFGLTVSGKTPEGPFRVSCRQIILALPPRLAAARIAFLPDLVAETKQDMSAVPTWMAGHAKLIAVYDRPFWRAQGFSGDAISHVGPLVEIHDASAEEDPQGEAALFGFVAPQEVQNTADREAFVSRALLQLKELFGPEAGRPAKVFLKVWAADPLVATKRDQETLTSHPQYGPLPIVESWHDRLFLSGTETAPENGGFLEGALEAAERSVAWVRRHLAKSNNAVPGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AD60</accession>
    <name>A0A0M7AD60_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7 11">Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex</fullName>
            <ecNumber evidence="6 11">2.3.1.61</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="11">2-oxoglutarate dehydrogenase complex component E2</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="14" type="primary">sucB</name>
        <name evidence="14" type="ORF">LAX5112_02870</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3 11">E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2-oxoglutarate to succinyl-CoA and CO(2).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 11">
            <text>(R)-N(6)-dihydrolipoyl-L-lysyl-[2-oxoglutarate dehydrogenase complex component E2] + succinyl-CoA = (R)-N(6)-(S(8)-succinyldihydrolipoyl)-L-lysyl-[2-oxoglutarate dehydrogenase complex component E2] + CoA</text>
            <dbReference type="Rhea" id="RHEA:15213"/>
            <dbReference type="Rhea" id="RHEA-COMP:10581"/>
            <dbReference type="Rhea" id="RHEA-COMP:10582"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57292"/>
            <dbReference type="ChEBI" id="CHEBI:83100"/>
            <dbReference type="ChEBI" id="CHEBI:83120"/>
            <dbReference type="EC" id="2.3.1.61"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>(R)-lipoate</name>
            <dbReference type="ChEBI" id="CHEBI:83088"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="4 11">Amino-acid degradation; L-lysine degradation via saccharopine pathway; glutaryl-CoA from L-lysine: step 6/6.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5 11">Belongs to the 2-oxoacid dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.61" evidence="6 11"/>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71574.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672388.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02870"/>
    <dbReference type="EnsemblBacteria" id="CTQ71574">
        <property type="protein sequence ID" value="CTQ71574"/>
        <property type="gene ID" value="LAX5112_02870"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00868">
        <property type="reaction ID" value="UER00840"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045252">
        <property type="term" value="C:oxoglutarate dehydrogenase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004149">
        <property type="term" value="F:dihydrolipoyllysine-residue succinyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033512">
        <property type="term" value="P:L-lysine catabolic process to acetyl-CoA via saccharopine"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006099">
        <property type="term" value="P:tricarboxylic acid cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.559.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.320.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003016">
        <property type="entry name" value="2-oxoA_DH_lipoyl-BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001078">
        <property type="entry name" value="2-oxoacid_DH_actylTfrase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000089">
        <property type="entry name" value="Biotin_lipoyl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023213">
        <property type="entry name" value="CAT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036625">
        <property type="entry name" value="E3-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004167">
        <property type="entry name" value="PSBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011053">
        <property type="entry name" value="Single_hybrid_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006255">
        <property type="entry name" value="SucB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00198">
        <property type="entry name" value="2-oxoacid_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00364">
        <property type="entry name" value="Biotin_lipoyl"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02817">
        <property type="entry name" value="E3_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47005">
        <property type="entry name" value="SSF47005"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51230">
        <property type="entry name" value="SSF51230"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01347">
        <property type="entry name" value="sucB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50968">
        <property type="entry name" value="BIOTINYL_LIPOYL"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00189">
        <property type="entry name" value="LIPOYL"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51826">
        <property type="entry name" value="PSBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11 14" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="10 11" id="KW-0450">Lipoyl</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9 11 14" id="KW-0808">Transferase</keyword>
    <keyword evidence="8 11" id="KW-0816">Tricarboxylic acid cycle</keyword>
    <feature type="domain" description="Lipoyl-binding" evidence="12">
        <location>
            <begin position="2"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="domain" description="Lipoyl-binding" evidence="12">
        <location>
            <begin position="106"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="domain" description="Peripheral subunit-binding (PSBD)" evidence="13">
        <location>
            <begin position="212"/>
            <end position="249"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001267"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001938"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00005145"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00007317"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00012945"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00019511"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022532"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022823"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU361138"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS51826"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="CTQ71574.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="505" mass="52176" checksum="F555FB5B68F202D4" modified="2015-12-09" version="1">MATEIRVPTLGESVSEATIAQWFKKPGDAINQDEPLVELETDKVTVEVPAPASGTLESIVVKEGDTVEVGALLGQIAEGAGAAAAAPAASAPAPAKKEAPAAKAELVDVVTPSAGESVTEAEVGEWSVKVGDTVKADDTLVELETDKAAQEVPAPVAGTVVKIAAETGATVEPGVLLCQIDPSGAGAAAAAPAAASAPAPAATAPSVGTSMPPAPSAAKMMAEKNISADQVAGSGKRGQVLKGDVIAAAAAGVTAAPAATAAAPRGPVSADDEVREERVRMTKLRQTIARRLKDAQNTAAMLTTYNEVDMGPVMELRKQYKDLFEKKHGVKLGFMGFFTKAVTHALKEIPAVNAEIDGTDIIYKNFAHIGVAVGTDKGLVVPVVRDADQMSIAEIEQEIGNLGRKARDGKLGMADMTGGTFTISNGGVYGSLMSSPILNAPQSGILGMHKIQERPMAVNGQVVIRPMMYLALSYDHRIVDGKEAVTFLVRVKESLEDPQRLVLDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AD99</accession>
    <name>A0A0M7AD99_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03424</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73105.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ73105">
        <property type="protein sequence ID" value="CTQ73105"/>
        <property type="gene ID" value="LAX5112_03424"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ73105.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="81" mass="9628" checksum="C8961D022CA0B9A0" modified="2015-12-09" version="1">MRIDTALRNQFQVWQPLQQVRSYFGAFAKQDDGISFLEPFGKRTNVFDMIGPDCDLVFFQFLKTRQTAQRIEPVIQYVHFH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AE06</accession>
    <name>A0A0M7AE06_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Sensor protein QseC</fullName>
            <ecNumber evidence="4">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">qseC_2</name>
        <name evidence="11" type="ORF">LAX5112_03429</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cell inner membrane</location>
            <topology evidence="3">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73119.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672839.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03429"/>
    <dbReference type="EnsemblBacteria" id="CTQ73119">
        <property type="protein sequence ID" value="CTQ73119"/>
        <property type="gene ID" value="LAX5112_03429"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013727">
        <property type="entry name" value="2CSK_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08521">
        <property type="entry name" value="2CSK_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="9" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="11" id="KW-0808">Transferase</keyword>
    <keyword evidence="7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="domain" description="Histidine kinase" evidence="10">
        <location>
            <begin position="244"/>
            <end position="455"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00017234"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ73119.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="476" mass="51731" checksum="FB41F5C1879E8079" modified="2015-12-09" version="1">MKRSYSLRLRLTLIILLPLLLVAGLAGVWQLNNARSTASDVFDRSLQSAALAVTNDVALSGGDALVANTRKILSDTSGGRVYYHVYAPDGVIVAGYATPPVGIPTSADGDLSPVYFNGEYLGREVRGYRMRTRMQVDGFSGVFTTTVWQDVSIRAAFVQDLTLRSLSVISSIILSLALIVWFGIRIGLWPLSDLQQAIDLRSGEDLKPIRRPVPVEVQGIVQTLNRLLGQVTEVMATQNEFISNAAHQLRNPIAGVLALAEAVRSAKSEDAMRERAEDLVNAVKDTSLLAQKLLTYERAKAIDQTSLKEAFSVNKLLDPLVSEYRNRFPPDVEIIWTPAPEDVRITGDRTMIREAVSNLIDNAFRHGGPKLDTITVGFERLGPDLSITIADNGVGLTPDQIRTARMRFGQVSENSGGSGLGLPIVERVAERHGGRLELKDQNPGLVVRMIISVGTCAAASQPADFTPTQLSAAHPE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEQ1</accession>
    <name>A0A0M7AEQ1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative HTH-type transcriptional regulator/GBAA_1941/BAS1801</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03350</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72886.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672764.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03350"/>
    <dbReference type="EnsemblBacteria" id="CTQ72886">
        <property type="protein sequence ID" value="CTQ72886"/>
        <property type="gene ID" value="LAX5112_03350"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000835">
        <property type="entry name" value="HTH_MarR-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01047">
        <property type="entry name" value="MarR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00598">
        <property type="entry name" value="HTHMARR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00347">
        <property type="entry name" value="HTH_MARR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50995">
        <property type="entry name" value="HTH_MARR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH marR-type" evidence="1">
        <location>
            <begin position="7"/>
            <end position="138"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72886.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="139" mass="15552" checksum="D4560B3DE380E22F" modified="2015-12-09" version="1">MSDDDFSLCVLTNARKAARAVSRYYDQMARKAGFTSGQFSVLVTVREHDGATTAELAERLSMERTTLVRNVALLEKKGFLISRPAADARGKAFSITEQGNLLIENALPLWRDAQENVKELLGEEDFLTSVRLMKRLSQL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AET3</accession>
    <name>A0A0M7AET3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Salmolysin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">slyA_2</name>
        <name evidence="3" type="ORF">LAX5112_03073</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72154.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040452572.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72154">
        <property type="protein sequence ID" value="CTQ72154"/>
        <property type="gene ID" value="LAX5112_03073"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046914">
        <property type="term" value="F:transition metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000835">
        <property type="entry name" value="HTH_MarR-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022689">
        <property type="entry name" value="Iron_dep_repressor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12802">
        <property type="entry name" value="MarR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00598">
        <property type="entry name" value="HTHMARR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00529">
        <property type="entry name" value="HTH_DTXR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00347">
        <property type="entry name" value="HTH_MARR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50995">
        <property type="entry name" value="HTH_MARR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH marR-type" evidence="2">
        <location>
            <begin position="6"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="141"/>
            <end position="172"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ72154.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="172" mass="19254" checksum="5051EBCB5C29D46C" modified="2015-12-09" version="1">MPFNYKKSITFRLLQAAKAQRARSGAHLMRIGLHPGQELVLKVLADADGRTMSQLALALGVQPPTVTKMVTRLSSQGYVRRQVSDSDGRLARVYLTETGRDLVVSVDKAWKRLEREAMAGIEDKDRKRLRKLLRQVEKNLSVSVDDDPDHEEDLEPDEADTASKTSKELNAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEX4</accession>
    <name>A0A0M7AEX4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03393</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72982.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72982">
        <property type="protein sequence ID" value="CTQ72982"/>
        <property type="gene ID" value="LAX5112_03393"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ72982.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="242" mass="28162" checksum="91270277CA245807" modified="2015-12-09" version="1">MAYFLELVSYQRHAIPYFTWDDEEECRKFGSKAFGFSSGFWVDPQAVPKSAYQERDKRVPDVFPMPGCNAVNQRFKDLVEEFEPGVHQFFPIELRNKAGDPLADNYYVFNCMVSVDTVLVKESGLQWEIDEPSGQSFLDILTFKHDMVLSRPAIGGRHLWQGLYLQPISSGGVFCSDAFQKELKKRKIRFLDQKHCAEVDDEWKPEDNIQPILDWEAEHGLHEGHRSWKRAQTLKERGRLEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEY7</accession>
    <name>A0A0M7AEY7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Trifunctional nucleotide phosphoesterase protein YfkN</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">yfkN_4</name>
        <name evidence="4" type="ORF">LAX5112_03635</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the 5'-nucleotidase family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73715.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672981.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03635"/>
    <dbReference type="EnsemblBacteria" id="CTQ73715">
        <property type="protein sequence ID" value="CTQ73715"/>
        <property type="gene ID" value="LAX5112_03635"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009166">
        <property type="term" value="P:nucleotide catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.21.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.780.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008334">
        <property type="entry name" value="5'-Nucleotdase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036907">
        <property type="entry name" value="5'-Nucleotdase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036691">
        <property type="entry name" value="Endo/exonu/phosph_ase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029052">
        <property type="entry name" value="Metallo-depent_PP-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02872">
        <property type="entry name" value="5_nucleotid_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55816">
        <property type="entry name" value="SSF55816"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56219">
        <property type="entry name" value="SSF56219"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56300">
        <property type="entry name" value="SSF56300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="5_nucleotid_C" evidence="3">
        <location>
            <begin position="633"/>
            <end position="819"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="173"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="868"/>
            <end position="889"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1010"/>
            <end position="1068"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="1010"/>
            <end position="1058"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006654"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF02872"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ73715.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="1716" mass="179907" checksum="60FAD279C368963C" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFM5</accession>
    <name>A0A0M7AFM5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 5 6">Elongation factor Ts</fullName>
            <shortName evidence="5">EF-Ts</shortName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 9" type="primary">tsf</name>
        <name evidence="9" type="ORF">LAX5112_03463</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5 6">Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF-Tu.GTP complex up to the GTP hydrolysis stage on the ribosome.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5 7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 5 6">Belongs to the EF-Ts family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73216.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008193435.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03463"/>
    <dbReference type="EnsemblBacteria" id="CTQ73216">
        <property type="protein sequence ID" value="CTQ73216"/>
        <property type="gene ID" value="LAX5112_03463"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003746">
        <property type="term" value="F:translation elongation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.479.20">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00050">
        <property type="entry name" value="EF_Ts"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036402">
        <property type="entry name" value="EF-Ts_dimer_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001816">
        <property type="entry name" value="Transl_elong_EFTs/EF1B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014039">
        <property type="entry name" value="Transl_elong_EFTs/EF1B_dimer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018101">
        <property type="entry name" value="Transl_elong_Ts_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009060">
        <property type="entry name" value="UBA-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11741">
        <property type="entry name" value="PTHR11741"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00889">
        <property type="entry name" value="EF_TS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46934">
        <property type="entry name" value="SSF46934"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54713">
        <property type="entry name" value="SSF54713"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00116">
        <property type="entry name" value="tsf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01127">
        <property type="entry name" value="EF_TS_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 5 6" id="KW-0251">Elongation factor</keyword>
    <keyword evidence="4 5 6" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="EF_TS" evidence="8">
        <location>
            <begin position="70"/>
            <end position="286"/>
        </location>
    </feature>
    <feature type="region of interest" description="Involved in Mg(2+) ion dislocation from EF-Tu" evidence="5">
        <location>
            <begin position="79"/>
            <end position="82"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005532"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00016956"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022768"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00050"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU000642"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU000643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00889"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ73216.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="305" mass="31915" checksum="FB9723885E1C8786" modified="2015-12-09" version="1">MSITAAMVKELREKSGAGMMDCKTALTENGGDMEAAVDWLRTKGLAKAAKKAGRVAAEGLVGVAAEGTKAAVIELNSETDFVARNEGFQELVGKVATVAVGTDGSVDAVTAANLDGKSVADSITDAIATIGENMTLRRTAILSVGDGVVSTYVHGAVADGLGKIGVLVALESSGDKDKLNALGRQIAMHVAATSPLALNTEELDQEVVEREKSVFSEQARESGKPENIIEKMVEGRLRKFYEEVTLVKQAFVINPDQTVEQAVEALAKDLGTDVKLSGFVRFALGEGIEKEEQDFAAEVAAASGQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGC3</accession>
    <name>A0A0M7AGC3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Ribosomal-protein-serine acetyltransferase</fullName>
            <ecNumber evidence="2">2.3.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">rimL_1</name>
        <name evidence="2" type="ORF">LAX5112_03611</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.3.1.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73651.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672964.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ73651">
        <property type="protein sequence ID" value="CTQ73651"/>
        <property type="gene ID" value="LAX5112_03611"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13302">
        <property type="entry name" value="Acetyltransf_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="24"/>
            <end position="187"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73651.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="201" mass="22134" checksum="8CD4BB75037F2FF5" modified="2015-12-09" version="1">MVVESDGLLDESSLYAAPLPQEAVHVRLDTPRVDDLADLVFLANNKQVAANLSTMPHPFTAQDGRALIEKAERNRPLNAGFAIRLKSTGRLIGLTRYANVEPDGPLHIGYWLGEPFWGRGYATEAVHALVDHAFTHTDAEELQGSCRVTNPASRRVLIKSGFQYRDPSMIRSLGAGGSVPIERYTLEKAVWKSLKGWGQGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGP3</accession>
    <name>A0A0M7AGP3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Cytokinin riboside 5'-monophosphate phosphoribohydrolase</fullName>
            <ecNumber evidence="2">3.2.2.n1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">fas6</name>
        <name evidence="3" type="ORF">LAX5112_03829</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>AMP + H2O = adenine + D-ribose 5-phosphate</text>
            <dbReference type="Rhea" id="RHEA:20129"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16708"/>
            <dbReference type="ChEBI" id="CHEBI:78346"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="3.2.2.4"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the LOG family.</text>
    </comment>
    <dbReference type="EC" id="3.2.2.n1" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74335.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03829"/>
    <dbReference type="EnsemblBacteria" id="CTQ74335">
        <property type="protein sequence ID" value="CTQ74335"/>
        <property type="gene ID" value="LAX5112_03829"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008714">
        <property type="term" value="F:AMP nucleosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009691">
        <property type="term" value="P:cytokinin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005269">
        <property type="entry name" value="LOG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031100">
        <property type="entry name" value="LOG_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03641">
        <property type="entry name" value="Lysine_decarbox"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00730">
        <property type="entry name" value="TIGR00730"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0203">Cytokinin biosynthesis</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU363015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ74335.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="211" mass="22746" checksum="9B76E9A5266AE97F" modified="2015-12-09" version="1">MPHHVVMTTNSPKHLKSVCVYCGSSFGSDPAHEAAAARLGQLIAESGLRLVYGGGSVGLMGTVARAAMECGGRVTGIIPQFLEKREVMLDTVEDLVITQNMHERKHLMFEKSDAFIALPGGIGTLEEAVEMMTWAQLGQHRKPVVLANINGFWSPLLELLDHMRAQGYIRPDTEVPYLIAKQVDQIIPMLEKSIGDGSDAPLEGGAAAADL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AI54</accession>
    <name>A0A0M7AI54_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta</fullName>
            <shortName evidence="2">ACCase subunit beta</shortName>
            <shortName evidence="2">Acetyl-CoA carboxylase carboxyltransferase subunit beta</shortName>
            <ecNumber evidence="2">2.1.3.15</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2 5" type="primary">accD</name>
        <name evidence="5" type="ORF">LAX5112_03819</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>acetyl-CoA + N(6)-carboxybiotinyl-L-lysyl-[protein] = malonyl-CoA + N(6)-biotinyl-L-lysyl-[protein]</text>
            <dbReference type="Rhea" id="RHEA:54728"/>
            <dbReference type="Rhea" id="RHEA-COMP:10505"/>
            <dbReference type="Rhea" id="RHEA-COMP:10506"/>
            <dbReference type="ChEBI" id="CHEBI:57288"/>
            <dbReference type="ChEBI" id="CHEBI:57384"/>
            <dbReference type="ChEBI" id="CHEBI:83144"/>
            <dbReference type="ChEBI" id="CHEBI:83145"/>
            <dbReference type="EC" id="2.1.3.15"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Lipid metabolism; malonyl-CoA biosynthesis; malonyl-CoA from acetyl-CoA: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Acetyl-CoA carboxylase is a heterohexamer composed of biotin carboxyl carrier protein (AccB), biotin carboxylase (AccC) and two subunits each of ACCase subunit alpha (AccA) and ACCase subunit beta (AccD).</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the AccD/PCCB family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.1.3.15" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74271.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008192715.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03819"/>
    <dbReference type="EnsemblBacteria" id="CTQ74271">
        <property type="protein sequence ID" value="CTQ74271"/>
        <property type="gene ID" value="LAX5112_03819"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00655">
        <property type="reaction ID" value="UER00711"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009317">
        <property type="term" value="C:acetyl-CoA carboxylase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003989">
        <property type="term" value="F:acetyl-CoA carboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016743">
        <property type="term" value="F:carboxyl- or carbamoyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006633">
        <property type="term" value="P:fatty acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:2001295">
        <property type="term" value="P:malonyl-CoA biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01395">
        <property type="entry name" value="AcetylCoA_CT_beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034733">
        <property type="entry name" value="AcCoA_carboxyl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000438">
        <property type="entry name" value="Acetyl_CoA_COase_Trfase_b_su"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029045">
        <property type="entry name" value="ClpP/crotonase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011762">
        <property type="entry name" value="COA_CT_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01039">
        <property type="entry name" value="Carboxyl_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01070">
        <property type="entry name" value="ACCCTRFRASEB"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52096">
        <property type="entry name" value="SSF52096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00515">
        <property type="entry name" value="accD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50980">
        <property type="entry name" value="COA_CT_NTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2" id="KW-0275">Fatty acid biosynthesis</keyword>
    <keyword evidence="2" id="KW-0276">Fatty acid metabolism</keyword>
    <keyword evidence="5" id="KW-0436">Ligase</keyword>
    <keyword evidence="2" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="2" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2 5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="CoA carboxyltransferase N-terminal" evidence="4">
        <location>
            <begin position="25"/>
            <end position="294"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="292"/>
            <end position="321"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="307"/>
            <end position="321"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01395"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ74271.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="321" mass="35556" checksum="17C5A9542C12835F" modified="2015-12-09" version="1">MNWINSIVRPKISGLWKKREVPENLWIKCPETGEMVFHRDLEANLWVIPSSGHHMRMPARKRLESLFDEGNYTRLDAPDVTIDPLKFRDSKRYTDRLKDARAKTGEEEAIHVAQGKVNGMDMTAAVQDFDFVGGSLGMAVGEAILSGMMKAVETKTPFVMFTASGGARMQEGILSLMQMPRTTVGIQMLREAGLPYIVVLTNPTTGGVSASYAMLGDVHIAEPGAMIGFAGRRVIEQTVREKLPDDFQTAEYLLDHGMVDMVVTRQEMKDTLARVCGILMKREVELPAIIADETAPAEVSETEEATTSDAQEPKKQPEVAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIC4</accession>
    <name>A0A0M7AIC4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Dephospho-CoA kinase</fullName>
            <ecNumber evidence="2">2.7.1.24</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="2">Dephosphocoenzyme A kinase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="2 3" type="primary">coaE</name>
        <name evidence="3" type="ORF">LAX5112_03782</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>3'-dephospho-CoA + ATP = ADP + CoA + H(+)</text>
            <dbReference type="Rhea" id="RHEA:18245"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57328"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.1.24"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Cofactor biosynthesis; coenzyme A biosynthesis; CoA from (R)-pantothenate: step 5/5.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the CoaE family.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.24" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74166.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673100.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03782"/>
    <dbReference type="EnsemblBacteria" id="CTQ74166">
        <property type="protein sequence ID" value="CTQ74166"/>
        <property type="gene ID" value="LAX5112_03782"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00241">
        <property type="reaction ID" value="UER00356"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004140">
        <property type="term" value="F:dephospho-CoA kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015937">
        <property type="term" value="P:coenzyme A biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00376">
        <property type="entry name" value="Dephospho_CoA_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001977">
        <property type="entry name" value="Depp_CoAkinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01121">
        <property type="entry name" value="CoaE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00152">
        <property type="entry name" value="TIGR00152"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51219">
        <property type="entry name" value="DPCK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0173">Coenzyme A biosynthesis</keyword>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2 3" id="KW-0418">Kinase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0808">Transferase</keyword>
    <feature type="binding site" evidence="2">
        <location>
            <begin position="11"/>
            <end position="16"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009018"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00376"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ74166.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="195" mass="20896" checksum="BE5DB476424443E4" modified="2015-12-09" version="1">MIKLGLTGSIGMGKSTTAKMFAELGVPVHDSDATVHALYSGRAAPLIEAAFPGTVVDGTVDRTLLSPHVLGKPEAMKRLEAIVHPLVREEELAFLEKAKADRHRVVVLDIPLLFETGGDKRVDGVVVVTADADVQRARVLDRPGMTEDRFNAILSKQMPDAQKRKRAHFLIDTGLGMDAARRSVAAVLKASAAIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIG7</accession>
    <name>A0A0M7AIG7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Mannose-1-phosphate guanylyltransferase</fullName>
            <ecNumber evidence="3">2.7.7.13</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">algA</name>
        <name evidence="8" type="ORF">LAX5112_03845</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>alpha-D-mannose 1-phosphate + GTP + H(+) = diphosphate + GDP-alpha-D-mannose</text>
            <dbReference type="Rhea" id="RHEA:15229"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
            <dbReference type="ChEBI" id="CHEBI:57527"/>
            <dbReference type="ChEBI" id="CHEBI:58409"/>
            <dbReference type="EC" id="2.7.7.13"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the mannose-6-phosphate isomerase type 2 family.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.13" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74381.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673160.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03845"/>
    <dbReference type="EnsemblBacteria" id="CTQ74381">
        <property type="protein sequence ID" value="CTQ74381"/>
        <property type="gene ID" value="LAX5112_03845"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004475">
        <property type="term" value="F:mannose-1-phosphate guanylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000271">
        <property type="term" value="P:polysaccharide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006375">
        <property type="entry name" value="Man1P_GuaTrfase/Man6P_Isoase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001538">
        <property type="entry name" value="Man6P_isomerase-2_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005835">
        <property type="entry name" value="NTP_transferase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01050">
        <property type="entry name" value="MannoseP_isomer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00483">
        <property type="entry name" value="NTP_transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01479">
        <property type="entry name" value="GMP_PMI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="NTP_transferase" evidence="6">
        <location>
            <begin position="4"/>
            <end position="281"/>
        </location>
    </feature>
    <feature type="domain" description="MannoseP_isomer" evidence="7">
        <location>
            <begin position="312"/>
            <end position="459"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001083"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006115"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012387"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU004190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00483"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF01050"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ74381.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="461" mass="50567" checksum="D58DE0ECB58AFA37" modified="2015-12-09" version="1">MIYPCILSGGIGSRLWPLSRKDRPKQFLPIFGGESLFQKTCKRVSGEGFSDPIVIGGDSHRFLMGEQLAEIDTAATTILLEPVGRNTAPPALMAALLAYEQDPNALILLLPSDHLIGKEDVFMTAVHHARDAALSGKIVTFGITPTEPNTGYGYIKLEPGSDPIRGVAAFVEKPDLERAKAFLADGAHVWNAGIFLYSAKTMIQAFKTYQPALSEAITALMATRHGDLDFTRLDEDGFAALENISIDYAIMEKADNVVCAPMAPDWDDLGSWSAIWGVLDKDGSGNSAIGDARFLDCKECLAYADQRLVSVIGLEDVMVIATTDSVLVAHKDKAQDVKKVVEQLESEGRSETERHPRTYRPWGYTERINAGDRFAVQSMMIKPGKRLSLQSHLHRAEHWVVVSGTLEITINGQVSLLTENQSAYVPLGAQHTLHNPGRIPVRMIEVQSGTYLQEDDIVRHS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIK6</accession>
    <name>A0A0M7AIK6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03810</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74246.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03810"/>
    <dbReference type="EnsemblBacteria" id="CTQ74246">
        <property type="protein sequence ID" value="CTQ74246"/>
        <property type="gene ID" value="LAX5112_03810"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024399">
        <property type="entry name" value="DUF2628"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10947">
        <property type="entry name" value="DUF2628"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="34"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="65"/>
            <end position="88"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74246.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="167" mass="18552" checksum="14B0547CCED19A14" modified="2015-12-09" version="1">MTSYVVMAPPEFESLNGDPEITGRMQFVPDRFSALAFLFSIPWILFHRMWLVFLGYLAVTLVIEIAALSLGGAAMGIAAFAIAILFGFEAQALRCWSLERKGWQMVGVAEGNGKEEAEIRFFANRMNKEQTPTPRDQQTTQPATNQIIPRIGSEQVVGLTLGPETRQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIR9</accession>
    <name>A0A0M7AIR9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Basal-body rod modification protein FlgD</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">LAX5112_04079</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Required for flagellar hook formation. May act as a scaffolding protein.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the FlgD family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ74998.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008195381.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04079"/>
    <dbReference type="EnsemblBacteria" id="CTQ74998">
        <property type="protein sequence ID" value="CTQ74998"/>
        <property type="gene ID" value="LAX5112_04079"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044781">
        <property type="term" value="P:bacterial-type flagellum organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005648">
        <property type="entry name" value="FlgD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03963">
        <property type="entry name" value="FlgD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1005">Bacterial flagellum biogenesis</keyword>
    <keyword evidence="5" id="KW-0966">Cell projection</keyword>
    <keyword evidence="5" id="KW-0969">Cilium</keyword>
    <keyword evidence="5" id="KW-0282">Flagellum</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010577"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00016013"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022795"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00024746"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ74998.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="134" mass="14088" checksum="22323AB056D8C74F" modified="2015-12-09" version="1">MTSVNPVASAAAANEAGGARAAQEQLTVDYNAFLQLMMTQMKNQDPTKPMDASEQLSQLATFSQVEQAIQTNSKLETMLTNMSFGQVDDLIGRTVTDSNGTTGVVEKVEIYSDGTILGLDNGKGVLLGPGVSIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIV4</accession>
    <name>A0A0M7AIV4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Spermidine/putrescine transport system permease protein PotB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">potB_2</name>
        <name evidence="7" type="ORF">LAX5112_04112</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ75085.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673370.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04112"/>
    <dbReference type="EnsemblBacteria" id="CTQ75085">
        <property type="protein sequence ID" value="CTQ75085"/>
        <property type="gene ID" value="LAX5112_04112"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="72"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="103"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="153"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="204"/>
            <end position="230"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="250"/>
            <end position="274"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="66"/>
            <end position="273"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ75085.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="288" mass="31951" checksum="3697D3707B6F8FFC" modified="2015-12-09" version="1">MQKDIKRLSLILLFAPFALWIILLIILPHIGMVILSLKEKVAPRVYEYSFANYLEFINEPIYWNTLLRTGSMSLLVTALALLIGFPIAYYIAKIAGPRARGGLFLLCLIPLWVSDLIRSFGWILLLRETGVISSFLLWTGIIGTPVEFLYNDVAVIIGLVYTVILFMIVPLVSTLDGMDNSMIEAGYNLGGNGFTVLRKIIVPYAMPGIVAGCIVTFMLTAGSYLTPILLGGKNSSWFTEQIYNQFITRFNWEGGAAFGMLLLLFTSFVIWLGLKLSGQTLANTVAKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIX4</accession>
    <name>A0A0M7AIX4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Enoyl-[acyl-carrier-protein] reductase [NADH]</fullName>
            <ecNumber evidence="7">1.3.1.9</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">fabI_3</name>
        <name evidence="10" type="ORF">LAX5112_03787</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>a 2,3-saturated acyl-[ACP] + NAD(+) = a (2E)-enoyl-[ACP] + H(+) + NADH</text>
            <dbReference type="Rhea" id="RHEA:10240"/>
            <dbReference type="Rhea" id="RHEA-COMP:9925"/>
            <dbReference type="Rhea" id="RHEA-COMP:9926"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:78784"/>
            <dbReference type="ChEBI" id="CHEBI:78785"/>
            <dbReference type="EC" id="1.3.1.9"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Lipid metabolism; fatty acid biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 7">Belongs to the short-chain dehydrogenases/reductases (SDR) family. FabI subfamily.</text>
    </comment>
    <dbReference type="EC" id="1.3.1.9" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74180.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673103.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03787"/>
    <dbReference type="EnsemblBacteria" id="CTQ74180">
        <property type="protein sequence ID" value="CTQ74180"/>
        <property type="gene ID" value="LAX5112_03787"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00094"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004318">
        <property type="term" value="F:enoyl-[acyl-carrier-protein] reductase (NADH) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016631">
        <property type="term" value="F:enoyl-[acyl-carrier-protein] reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006633">
        <property type="term" value="P:fatty acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd05372">
        <property type="entry name" value="ENR_SDR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014358">
        <property type="entry name" value="Enoyl-ACP_Rdtase_NADH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43159">
        <property type="entry name" value="PTHR43159"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000094">
        <property type="entry name" value="Enoyl-ACP_rdct"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0275">Fatty acid biosynthesis</keyword>
    <keyword evidence="6 7" id="KW-0276">Fatty acid metabolism</keyword>
    <keyword evidence="7" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="6 7" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="5 7 9" id="KW-0520">NAD</keyword>
    <keyword evidence="4 7 10" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" description="Proton acceptor" evidence="8">
        <location>
            <position position="146"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="8">
        <location>
            <position position="156"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="14"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="20"/>
            <end position="21"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="41"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="65"/>
            <end position="66"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="93"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="163"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="192"/>
            <end position="196"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009233"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023160"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRNR" id="PIRNR000094"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR000094-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR000094-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ74180.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="270" mass="29182" checksum="117292DCA5EF48EF" modified="2015-12-09" version="1">MSDLMKGKRGLIMGVANDHSIAWGIAKTLAEHGAELAFTYQGEAFGRRTKPLAESVGSTLMLPCDVEDIDSVDAVFAKLKEEWGTIDFLVHAIGFSDKNELKGKYSDTTRDNFSRTMVISCFSFTEITKRAAELMPDGGSIITLTYGGATKVMPNYNVMGVAKAALESSVRYLAADYGSQNIRVNAISAGPVRTLAGSGVSDARLMFNFQKRNSPLQRTVSLDEIGGTGLYLLSNLSGGVTGEVHFVDSGYNIMSMPHLDELKAQESRVD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIZ6</accession>
    <name>A0A0M7AIZ6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Crotonyl-CoA reductase</fullName>
            <ecNumber evidence="2">1.3.1.86</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ccrA2_2</name>
        <name evidence="2" type="ORF">LAX5112_04003</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.3.1.86" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74849.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673294.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04003"/>
    <dbReference type="EnsemblBacteria" id="CTQ74849">
        <property type="protein sequence ID" value="CTQ74849"/>
        <property type="gene ID" value="LAX5112_04003"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043880">
        <property type="term" value="F:crotonyl-CoA reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd08246">
        <property type="entry name" value="crotonyl_coA_red"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013149">
        <property type="entry name" value="ADH-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013154">
        <property type="entry name" value="ADH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010085">
        <property type="entry name" value="Crot_CoA_red"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011032">
        <property type="entry name" value="GroES-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020843">
        <property type="entry name" value="PKS_ER"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08240">
        <property type="entry name" value="ADH_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00107">
        <property type="entry name" value="ADH_zinc_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00829">
        <property type="entry name" value="PKS_ER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50129">
        <property type="entry name" value="SSF50129"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01751">
        <property type="entry name" value="crot-CoA-red"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PKS_ER" evidence="1">
        <location>
            <begin position="49"/>
            <end position="403"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74849.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="431" mass="47710" checksum="D25630555727F1F3" modified="2015-12-09" version="1">MTATAQANDNQTRGDAPLKDLYEIGEIPPLGHVPKNMYAWAIRRERHGAPEDAMKLEVVPTWELNSHEVLVLVMAAGVNYNGIWAGLGEPISPFDGHGAPFHIAGSDASGIVWAVGDKVKRWKVGDEVVIHCNQDDGDDEDCNGGDPMYSNSQRIWGYETPDGSFSQFTRVQAQQLMPRPKHQTWEESACYTLTLATAYRMLFGHHPHELKPGQNVLVWGASGGLGSYAIQLITAAGANAIGVISDEDKRDFVMDLGAKGVLNRKDFNCWGQLPKVGSPEYADWFKEVRKFGKAIWDITGKGNNVDIVFEHPGEATFPVSTFVCKKGGMVVICAGTSGFNCTFDVRYMWMHQKRLQGSHFAHLKQASAANKLMIERRIDPYMSEVFPWDQIPQAHTKMWKNQHAPGNMSVLVCAPATGLRTLEDVIEAGKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="36" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJ51</accession>
    <name>A0A0M7AJ51_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Aspartate--tRNA(Asp/Asn) ligase</fullName>
            <ecNumber evidence="7">6.1.1.23</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Aspartyl-tRNA synthetase</fullName>
            <shortName evidence="7">AspRS</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">Non-discriminating aspartyl-tRNA synthetase</fullName>
            <shortName evidence="7">ND-AspRS</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7 9" type="primary">aspS</name>
        <name evidence="9" type="ORF">LAX5112_03917</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>ATP + L-aspartate + tRNA(Asx) = AMP + diphosphate + L-aspartyl-tRNA(Asx)</text>
            <dbReference type="Rhea" id="RHEA:18349"/>
            <dbReference type="Rhea" id="RHEA-COMP:9710"/>
            <dbReference type="Rhea" id="RHEA-COMP:9711"/>
            <dbReference type="ChEBI" id="CHEBI:29991"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78516"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.23"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="7">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 7">Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.23" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74601.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673219.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03917"/>
    <dbReference type="EnsemblBacteria" id="CTQ74601">
        <property type="protein sequence ID" value="CTQ74601"/>
        <property type="gene ID" value="LAX5112_03917"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004815">
        <property type="term" value="F:aspartate-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050560">
        <property type="term" value="F:aspartate-tRNA(Asn) ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006422">
        <property type="term" value="P:aspartyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1360.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.930.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00044">
        <property type="entry name" value="Asp_tRNA_synth_type1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004364">
        <property type="entry name" value="Aa-tRNA-synt_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006195">
        <property type="entry name" value="aa-tRNA-synth_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045864">
        <property type="entry name" value="aa-tRNA-synth_II/BPL/LPL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004524">
        <property type="entry name" value="Asp-tRNA-ligase_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002312">
        <property type="entry name" value="Asp/Asn-tRNA-synth_IIb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004115">
        <property type="entry name" value="GAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029351">
        <property type="entry name" value="GAD_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004365">
        <property type="entry name" value="NA-bd_OB_tRNA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22594:SF5">
        <property type="entry name" value="PTHR22594:SF5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02938">
        <property type="entry name" value="GAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00152">
        <property type="entry name" value="tRNA-synt_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01336">
        <property type="entry name" value="tRNA_anti-codon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01042">
        <property type="entry name" value="TRNASYNTHASP"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55261">
        <property type="entry name" value="SSF55261"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55681">
        <property type="entry name" value="SSF55681"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00459">
        <property type="entry name" value="aspS_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50862">
        <property type="entry name" value="AA_TRNA_LIGASE_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="4 7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2 7 9" id="KW-0436">Ligase</keyword>
    <keyword evidence="3 7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5 7" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AA_TRNA_LIGASE_II" evidence="8">
        <location>
            <begin position="144"/>
            <end position="560"/>
        </location>
    </feature>
    <feature type="region of interest" description="Aspartate" evidence="7">
        <location>
            <begin position="199"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="175"/>
        </location>
        <ligand>
            <name>L-aspartate</name>
            <dbReference type="ChEBI" id="CHEBI:29991"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="221"/>
            <end position="223"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="221"/>
        </location>
        <ligand>
            <name>L-aspartate</name>
            <dbReference type="ChEBI" id="CHEBI:29991"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="454"/>
        </location>
        <ligand>
            <name>L-aspartate</name>
            <dbReference type="ChEBI" id="CHEBI:29991"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="487"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="494"/>
        </location>
        <ligand>
            <name>L-aspartate</name>
            <dbReference type="ChEBI" id="CHEBI:29991"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="539"/>
            <end position="542"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="site" description="Important for tRNA non-discrimination" evidence="7">
        <location>
            <position position="33"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006303"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00044"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50862"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ74601.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="593" mass="67202" checksum="343C33D0661A9AC9" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJB9</accession>
    <name>A0A0M7AJB9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Putative chloramphenical resistance permease RarD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">LAX5112_03827</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the EamA transporter family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74330.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03827"/>
    <dbReference type="EnsemblBacteria" id="CTQ74330">
        <property type="protein sequence ID" value="CTQ74330"/>
        <property type="gene ID" value="LAX5112_03827"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004626">
        <property type="entry name" value="RarD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22911:SF114">
        <property type="entry name" value="PTHR22911:SF114"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="23"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="55"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="82"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="113"/>
            <end position="133"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007362"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ74330.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="148" mass="16297" checksum="6DE26D3A7A88526A" modified="2015-12-09" version="1">MLAFSFAGYGYVRKVTPVKATPGLFVETVLLFPIAMGYLLLSLSWGVDALILDDIPVLIALAGTGIVTALPLICFSSAARRLPLFMLGLMQYIAPSIHFLMAVYVWGEPLDQAKLLGFVMIWIALVVFTFDSWRNARNARKAQQQATV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJG5</accession>
    <name>A0A0M7AJG5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03970</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74777.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451062.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03970"/>
    <dbReference type="EnsemblBacteria" id="CTQ74777">
        <property type="protein sequence ID" value="CTQ74777"/>
        <property type="gene ID" value="LAX5112_03970"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ74777.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="132" mass="13394" checksum="71E63856ACBB10CD" modified="2015-12-09" version="1">MNFGTLFPRLSVTAVLVVSLTACGQTGSNYRPIVDGPMGYTYEKDLGDCKALAEQRRLFNDETKMAALAGAAIGGVLGAVEDDDGKNAAGNAVAGALAGGAIGAGGGALNAHGERKQIVMNCMRGRGHRVVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJM5</accession>
    <name>A0A0M7AJM5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Precorrin-4 C(11)-methyltransferase</fullName>
            <ecNumber evidence="7">2.1.1.133</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">cobM</name>
        <name evidence="7" type="ORF">LAX5112_03656</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Cofactor biosynthesis; adenosylcobalamin biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the precorrin methyltransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.133" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73784.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672999.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03656"/>
    <dbReference type="EnsemblBacteria" id="CTQ73784">
        <property type="protein sequence ID" value="CTQ73784"/>
        <property type="gene ID" value="LAX5112_03656"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00148"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046026">
        <property type="term" value="F:precorrin-4 C11-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009236">
        <property type="term" value="P:cobalamin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd11641">
        <property type="entry name" value="Precorrin-4_C11-MT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.950.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1010.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000878">
        <property type="entry name" value="4pyrrol_Mease"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035996">
        <property type="entry name" value="4pyrrol_Methylase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014777">
        <property type="entry name" value="4pyrrole_Mease_sub1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014776">
        <property type="entry name" value="4pyrrole_Mease_sub2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006362">
        <property type="entry name" value="Cbl_synth_CobM/CibF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003043">
        <property type="entry name" value="Uropor_MeTrfase_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00590">
        <property type="entry name" value="TP_methylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53790">
        <property type="entry name" value="SSF53790"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01465">
        <property type="entry name" value="cobM_cbiF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00839">
        <property type="entry name" value="SUMT_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 7" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="4 7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="TP_methylase" evidence="6">
        <location>
            <begin position="3"/>
            <end position="208"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004953"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005879"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00590"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ73784.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="257" mass="27467" checksum="897F64E41E55C309" modified="2015-12-09" version="1">MTVHFIGAGPGDPDLITVRGLRLIQNCPVCLYAGSLVPEQIVAAAPEGARVIDTAPMTLDEIIAEIQTAHENGQDVARVHSGDPSIYGATAEQMRRLEALGIDYDVTPGVPAFAAAAAALKTELTIPEVAQTVIVTRTAMKSSAMPNNEDLDTLGKSGATLAIHLSIRNLREVERQLAPHYGADCPVIVAYRVGWPDEAFIHGTLSTIAEKVRAAKITRTALIFVGHALKPGQDFRDSALYDADHVHVLRPKKKAKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJP0</accession>
    <name>A0A0M7AJP0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03720</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ73993.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008193782.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ73993">
        <property type="protein sequence ID" value="CTQ73993"/>
        <property type="gene ID" value="LAX5112_03720"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809404" evidence="2">
        <location>
            <begin position="29"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="34"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="38"/>
            <end position="60"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ73993.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="74" mass="7584" checksum="0421F3F85531C436" modified="2015-12-09" version="1">MVTTRRMMTFAMTGLCLGLLLTGCGRKAALDTPTAAAQPSAAEVQAETQGIYTPEQPAPTASSGGFILDPLIGN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJV0</accession>
    <name>A0A0M7AJV0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03886</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74510.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673191.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74510">
        <property type="protein sequence ID" value="CTQ74510"/>
        <property type="gene ID" value="LAX5112_03886"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ74510.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="330" mass="35724" checksum="4E61AD67F2B2A3B3" modified="2015-12-09" version="1">MSIEDEPSTDSLYDKPHVFFLVPYNADVDAEQDELGAMLRLGEYSDVEETARLDGFIDEYYPDQHIQDSAADGKTSTEVAAGEKDHAKGILLACDGRILLKTRGKMYSDTADFHQRTRGTYKLIIEDTYTVTVSGDVSITSTTGDINIKASAGEIVLESGTDKDIILRAGTSTNGDATGMIYEYSKGHYKSILGEEYKVSETENTFTTGTSNNFYFGAKSTINGDADFTMTVGASALVKPLLNLTITGIDVSFAASKTDLKNVYLAVRGVQTESQALKASVRSLKSEVNALHTDTSELRNETAMLTTSAEGVVSKINSMDAEITELKAVI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AK25</accession>
    <name>A0A0M7AK25_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Ribosome-binding ATPase YchF</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4 7" type="primary">ychF</name>
        <name evidence="7" type="ORF">LAX5112_04157</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. YchF/OLA1 subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75239.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008195267.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04157"/>
    <dbReference type="EnsemblBacteria" id="CTQ75239">
        <property type="protein sequence ID" value="CTQ75239"/>
        <property type="gene ID" value="LAX5112_04157"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043023">
        <property type="term" value="F:ribosomal large subunit binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043022">
        <property type="term" value="F:ribosome binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd04867">
        <property type="entry name" value="TGS_YchF_OLA1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01900">
        <property type="entry name" value="YchF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00944">
        <property type="entry name" value="YchF_OLA1_ATPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004396">
        <property type="entry name" value="ATPase_YchF/OLA1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012675">
        <property type="entry name" value="Beta-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031167">
        <property type="entry name" value="G_OBG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006073">
        <property type="entry name" value="GTP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004095">
        <property type="entry name" value="TGS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012676">
        <property type="entry name" value="TGS-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023192">
        <property type="entry name" value="TGS-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013029">
        <property type="entry name" value="YchF_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041706">
        <property type="entry name" value="YchF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01926">
        <property type="entry name" value="MMR_HSR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06071">
        <property type="entry name" value="YchF-GTPase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006641">
        <property type="entry name" value="CHP00092"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00326">
        <property type="entry name" value="GTP1OBG"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81271">
        <property type="entry name" value="SSF81271"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00092">
        <property type="entry name" value="TIGR00092"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51710">
        <property type="entry name" value="G_OBG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51880">
        <property type="entry name" value="TGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0460">Magnesium</keyword>
    <keyword evidence="1 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="OBG-type G" evidence="5">
        <location>
            <begin position="3"/>
            <end position="259"/>
        </location>
    </feature>
    <feature type="domain" description="TGS" evidence="6">
        <location>
            <begin position="281"/>
            <end position="364"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="12"/>
            <end position="17"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00944"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51710"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51880"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ75239.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="366" mass="39126" checksum="08CF446633E5E2B5" modified="2015-12-09" version="1">MGFQCGIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDPRLYAIRDIAQSKEVIPTRITFVDIAGLVRGASKGEGLGNQFLANIREVDAIAHVLRCFEDDDITHVDGAIDPIADADTVETELMVSDMESLEKRIAPLKKKATGGDKEAKAVLPIMEGALALLQDGKPARMLETADAEEAKMLQGLNLLTSKPVLYVCNVDEASAGEGNELSRKVAEKAAAEGAVAVVISAAIEAEISQLDKEEQEEFLETIGLEEPGLDRMIRAGYELLGLITYFTAGPKETRAWTITDGTKAPGAAGVIHTDFERGFIRAQTIAYDDYTSLGGESAAKEAGKARDEGKEYIVKDGDVLLFKFNT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKM2</accession>
    <name>A0A0M7AKM2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Murein L,D-transpeptidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_04056</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Cell wall biogenesis; peptidoglycan biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the YkuD family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ74956.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04056"/>
    <dbReference type="EnsemblBacteria" id="CTQ74956">
        <property type="protein sequence ID" value="CTQ74956"/>
        <property type="gene ID" value="LAX5112_04056"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00219"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071972">
        <property type="term" value="F:peptidoglycan L,D-transpeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd16913">
        <property type="entry name" value="YkuD_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.101.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.440.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005490">
        <property type="entry name" value="LD_TPept_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045380">
        <property type="entry name" value="LD_TPept_scaffold_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002477">
        <property type="entry name" value="Peptidoglycan-bd-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036365">
        <property type="entry name" value="PGBD-like_sf"/>
    </dbReference>
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        <property type="entry name" value="PGBDSf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038063">
        <property type="entry name" value="Transpep_catalytic_dom"/>
    </dbReference>
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        <property type="entry name" value="PG_binding_1"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="Scaffold"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="YkuD"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="SSF141523"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="SSF47090"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
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        <location>
            <begin position="162"/>
            <end position="299"/>
        </location>
    </feature>
    <feature type="domain" description="PG_binding_1" evidence="4">
        <location>
            <begin position="359"/>
            <end position="392"/>
        </location>
    </feature>
    <feature type="domain" description="YkuD" evidence="5">
        <location>
            <begin position="421"/>
            <end position="586"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004752"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF01471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF03734"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF20142"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ74956.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="658" mass="72275" checksum="C29915CA6A776336" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AL75</accession>
    <name>A0A0M7AL75_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Swarming motility protein SwrC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">swrC</name>
        <name evidence="3" type="ORF">LAX5112_03839</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74364.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673156.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03839"/>
    <dbReference type="EnsemblBacteria" id="CTQ74364">
        <property type="protein sequence ID" value="CTQ74364"/>
        <property type="gene ID" value="LAX5112_03839"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.2090.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027463">
        <property type="entry name" value="AcrB_DN_DC_subdom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001036">
        <property type="entry name" value="Acrflvin-R"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32063">
        <property type="entry name" value="PTHR32063"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00873">
        <property type="entry name" value="ACR_tran"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00702">
        <property type="entry name" value="ACRIFLAVINRP"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82714">
        <property type="entry name" value="SSF82714"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="332"/>
            <end position="351"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="358"/>
            <end position="379"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="385"/>
            <end position="406"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="427"/>
            <end position="448"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="460"/>
            <end position="486"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="498"/>
            <end position="519"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="531"/>
            <end position="552"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="610"/>
            <end position="631"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="952"/>
            <end position="972"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="979"/>
            <end position="999"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="1005"/>
            <end position="1027"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="1055"/>
            <end position="1075"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="1095"/>
            <end position="1128"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1137"/>
            <end position="1191"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ74364.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="1191" mass="129188" checksum="0B240D4CB4CDA8C8" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALI9</accession>
    <name>A0A0M7ALI9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="12">Putative multidrug export ATP-binding/permease protein</fullName>
            <ecNumber evidence="12">3.6.3.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">LAX5112_04173</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.-" evidence="12"/>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75286.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04173"/>
    <dbReference type="EnsemblBacteria" id="CTQ75286">
        <property type="protein sequence ID" value="CTQ75286"/>
        <property type="gene ID" value="LAX5112_04173"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008643">
        <property type="term" value="P:carbohydrate transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1560.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011527">
        <property type="entry name" value="ABC1_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036640">
        <property type="entry name" value="ABC1_TM_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039421">
        <property type="entry name" value="Type_1_exporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24221">
        <property type="entry name" value="PTHR24221"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00664">
        <property type="entry name" value="ABC_membrane"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90123">
        <property type="entry name" value="SSF90123"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50929">
        <property type="entry name" value="ABC_TM1F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 8 12" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="12" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="4 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0762">Sugar transport</keyword>
    <keyword evidence="3 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="47"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="92"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="167"/>
            <end position="188"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="194"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="270"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="11">
        <location>
            <begin position="52"/>
            <end position="332"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="10">
        <location>
            <begin position="373"/>
            <end position="612"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="406"/>
            <end position="413"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022597"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ75286.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="624" mass="69905" checksum="D9CCE968260D6EBA" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALK6</accession>
    <name>A0A0M7ALK6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 5">Glucose-1-phosphate thymidylyltransferase</fullName>
            <ecNumber evidence="4 5">2.7.7.24</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">rmlA</name>
        <name evidence="7" type="ORF">LAX5112_04224</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 5">
            <text>alpha-D-glucose 1-phosphate + dTTP + H(+) = diphosphate + dTDP-alpha-D-glucose</text>
            <dbReference type="Rhea" id="RHEA:15225"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:37568"/>
            <dbReference type="ChEBI" id="CHEBI:57477"/>
            <dbReference type="ChEBI" id="CHEBI:58601"/>
            <dbReference type="EC" id="2.7.7.24"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="3 5">Belongs to the glucose-1-phosphate thymidylyltransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.24" evidence="4 5"/>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75421.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673461.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000021.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04224"/>
    <dbReference type="EnsemblBacteria" id="CTQ75421">
        <property type="protein sequence ID" value="CTQ75421"/>
        <property type="gene ID" value="LAX5112_04224"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008879">
        <property type="term" value="F:glucose-1-phosphate thymidylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045226">
        <property type="term" value="P:extracellular polysaccharide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd02538">
        <property type="entry name" value="G1P_TT_short"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005907">
        <property type="entry name" value="G1P_thy_trans_s"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005835">
        <property type="entry name" value="NTP_transferase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43532">
        <property type="entry name" value="PTHR43532"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00483">
        <property type="entry name" value="NTP_transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01207">
        <property type="entry name" value="rmlA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0460">Magnesium</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5 7" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="NTP_transferase" evidence="6">
        <location>
            <begin position="2"/>
            <end position="237"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001095"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010480"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012461"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU003706"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00483"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ75421.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="293" mass="32587" checksum="230E1917FE2C6928" modified="2015-12-09" version="1">MKGIILAGGSGTRLHPATLAVNKQLMTIYDKPMIYYPLSVLMLAKIREILIISSPEFIDSYKRLFGDGSQLGLEISYKVQPSPDGLAQAFTLGEEFIGDDNVALILGDNIYYGAGLTTLLDRATSRTEGATVFAYEVDDPERYGVAELDSEGRAISLEEKPANPKSRLAVTGLYFYDNKVVDYAKNLKPSARGEYEITDLNRIYMDAGNLFVERMSRGYAWLDTGTHDSLLEAGEFVRTIQKRQGLNVACIEEISYLNGWMTKDELLKFAEMFQKTAYGKYLKKVADDGTSAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALP7</accession>
    <name>A0A0M7ALP7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">TRAP-type C4-dicarboxylate transport system, small permease component</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">LAX5112_04448</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ76048.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673654.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000024.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76048">
        <property type="protein sequence ID" value="CTQ76048"/>
        <property type="gene ID" value="LAX5112_04448"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007387">
        <property type="entry name" value="TRAP_DctQ"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04290">
        <property type="entry name" value="DctQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="32"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="66"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="106"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="152"/>
            <end position="172"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ76048.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="199" mass="21141" checksum="7E59AFE553FFD39F" modified="2015-12-09" version="1">MGTVTPGKPVPPGSGRGRFSSPLRLLAGLETAFIAIAAVAILSMCVYITLGIVLRTFVGMQIPDEVVIVGDLMIGALILPLAYVAADRGFIAVEVITDLLPKATQVWLNVLAAIIGLCAVIPITYAGYLAMIHAIESGNYFFGILEVPEWPGRVAFFAGYALFFIRLTVLFIQDVWTAISSGGGGNSNKTHDPSWEEAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AM84</accession>
    <name>A0A0M7AM84_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Carbon monoxide dehydrogenase large chain</fullName>
            <ecNumber evidence="2">1.2.99.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">cutL_2</name>
        <name evidence="2" type="ORF">LAX5112_04312</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.2.99.2" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000022">
        <property type="protein sequence ID" value="CTQ75641.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673539.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000022.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04312"/>
    <dbReference type="EnsemblBacteria" id="CTQ75641">
        <property type="protein sequence ID" value="CTQ75641"/>
        <property type="gene ID" value="LAX5112_04312"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000674">
        <property type="entry name" value="Ald_Oxase/Xan_DH_a/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036856">
        <property type="entry name" value="Ald_Oxase/Xan_DH_a/b_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016208">
        <property type="entry name" value="Ald_Oxase/xanthine_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008274">
        <property type="entry name" value="AldOxase/xan_DH_Mopterin-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037165">
        <property type="entry name" value="AldOxase/xan_DH_Mopterin-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11908">
        <property type="entry name" value="PTHR11908"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01315">
        <property type="entry name" value="Ald_Xan_dh_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02738">
        <property type="entry name" value="Ald_Xan_dh_C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01008">
        <property type="entry name" value="Ald_Xan_dh_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54665">
        <property type="entry name" value="SSF54665"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56003">
        <property type="entry name" value="SSF56003"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ald_Xan_dh_C" evidence="1">
        <location>
            <begin position="20"/>
            <end position="140"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM01008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75641.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="786" mass="83734" checksum="147334C59DD06170" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANQ5</accession>
    <name>A0A0M7ANQ5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Salmolysin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">slyA_4</name>
        <name evidence="2" type="ORF">LAX5112_04451</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ76056.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673657.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000024.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04451"/>
    <dbReference type="EnsemblBacteria" id="CTQ76056">
        <property type="protein sequence ID" value="CTQ76056"/>
        <property type="gene ID" value="LAX5112_04451"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000835">
        <property type="entry name" value="HTH_MarR-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023187">
        <property type="entry name" value="Tscrpt_reg_MarR-type_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12802">
        <property type="entry name" value="MarR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00598">
        <property type="entry name" value="HTHMARR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00347">
        <property type="entry name" value="HTH_MARR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01117">
        <property type="entry name" value="HTH_MARR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50995">
        <property type="entry name" value="HTH_MARR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH marR-type" evidence="1">
        <location>
            <begin position="22"/>
            <end position="151"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76056.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="162" mass="17920" checksum="204D26341A29B812" modified="2015-12-09" version="1">MDASNWDNKEDGREMDATLAACKSIFQDIARFRGLLFDRLIAPYGLTMSQARVLLHLLAEDKLTQSDIARRIDVGTVTVGGLVDRLEARGLVERRADPVDRRAKRVCLTDEARPLEKIMDACSAEVDGASFKGLPETSIHVLLSNLQAVRQNLLETLNKDAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AP02</accession>
    <name>A0A0M7AP02_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Putative thiol oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_04486</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ76146.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673683.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000024.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04486"/>
    <dbReference type="EnsemblBacteria" id="CTQ76146">
        <property type="protein sequence ID" value="CTQ76146"/>
        <property type="gene ID" value="LAX5112_04486"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.760.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009056">
        <property type="entry name" value="Cyt_c-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036909">
        <property type="entry name" value="Cyt_c-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010538">
        <property type="entry name" value="DHOR"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06537">
        <property type="entry name" value="DHOR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46626">
        <property type="entry name" value="SSF46626"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51007">
        <property type="entry name" value="CYTC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 4" id="KW-0349">Heme</keyword>
    <keyword evidence="3 4" id="KW-0408">Iron</keyword>
    <keyword evidence="2 4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="5">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809495" evidence="5">
        <location>
            <begin position="24"/>
            <end position="474"/>
        </location>
    </feature>
    <feature type="domain" description="Cytochrome c" evidence="6">
        <location>
            <begin position="304"/>
            <end position="471"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00433"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ76146.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="474" mass="51011" checksum="1EEABC53E7032E37" modified="2015-12-09" version="1">MTRRSSLLIGLAALAAFPAHGLADETLPPWSERTIIEDVDLNALAQSGKDPIPVLQPLGEALFEAKFTSLDGAGRPDATGAIVPTKVRRPSHLTFQRLAGPDANACASCHNEPVIGGAGSFAVNVFVSEGFESADFDTIDPQFSNERNTNALQGAGLIELLAREMTTDLRAQRRAVLQDARATGSTATTDLETKGISFGRLTAHPDGTLDVSELDGIDDDLTLRPFGQKGVFASLRQFTVNAMNDHHGIQADERFGARWTGTDDFDADGFAHEFSDGQISALVAWQATLPPPGRKHELPEIWEKAAARGELIFDEIGCTSCHVPALPLDSLVFQDPGPFDTAGTLRQSDVNQSLALDLATLEWVKTLPRDDSGRVLVPLFGDLKRHKIADPANDTLGNELLAQRFVARDVFITAELWGIGSTAPYGHRGDLTTLNEVILAHGGDASDSRKAYASLDEDGRQSVIAFLRSLEITQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APZ9</accession>
    <name>A0A0M7APZ9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Secondary thiamine-phosphate synthase enzyme</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04388</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UPF0047 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75863.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673605.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000023.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04388"/>
    <dbReference type="EnsemblBacteria" id="CTQ75863">
        <property type="protein sequence ID" value="CTQ75863"/>
        <property type="gene ID" value="LAX5112_04388"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.460">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001602">
        <property type="entry name" value="UPF0047"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035917">
        <property type="entry name" value="YjbQ-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30615">
        <property type="entry name" value="PTHR30615"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01894">
        <property type="entry name" value="UPF0047"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004681">
        <property type="entry name" value="UCP004681"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF111038">
        <property type="entry name" value="SSF111038"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00149">
        <property type="entry name" value="TIGR00149_YjbQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01314">
        <property type="entry name" value="UPF0047"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005534"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75863.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="141" mass="15736" checksum="376CA6A273B5E468" modified="2015-12-09" version="1">MQTLFSLKTSGQGLYEFTRSVSNWLVEEGAADGLLTLFVRHTSCSLLIQENADPDVQVDLKAYFSRLVPPASDPSMRYLTHTLEGPDDMPAHIKAAVLPVSLSIPVAGGEMRLGTWQGIYLFEHRDRPHQRQVAAHFLSDR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="32" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQY7</accession>
    <name>A0A0M7AQY7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">Carbamoyl-phosphate synthase large chain</fullName>
            <ecNumber evidence="13">6.3.5.5</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="13">Carbamoyl-phosphate synthetase ammonia chain</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="13 17" type="primary">carB</name>
        <name evidence="17" type="ORF">LAX5112_04717</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="18" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="18">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 13">
            <text>2 ATP + H2O + hydrogencarbonate + L-glutamine = 2 ADP + carbamoyl phosphate + 2 H(+) + L-glutamate + phosphate</text>
            <dbReference type="Rhea" id="RHEA:18633"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17544"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58228"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.5.5"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="13">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <cofactor evidence="13">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
        <text evidence="13">Binds 4 Mg(2+) or Mn(2+) ions per subunit.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="13">Amino-acid biosynthesis; L-arginine biosynthesis; carbamoyl phosphate from bicarbonate: step 1/1.</text>
    </comment>
    <comment type="pathway">
        <text evidence="3 13">Pyrimidine metabolism; UMP biosynthesis via de novo pathway; (S)-dihydroorotate from bicarbonate: step 1/3.</text>
    </comment>
    <comment type="subunit">
        <text evidence="13">Composed of two chains; the small (or glutamine) chain promotes the hydrolysis of glutamine to ammonia, which is used by the large (or ammonia) chain to synthesize carbamoyl phosphate.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4 13">Belongs to the CarB family.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="6.3.5.5" evidence="13"/>
    <dbReference type="EMBL" id="CXWD01000029">
        <property type="protein sequence ID" value="CTQ76826.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673892.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000029.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04717"/>
    <dbReference type="EnsemblBacteria" id="CTQ76826">
        <property type="protein sequence ID" value="CTQ76826"/>
        <property type="gene ID" value="LAX5112_04717"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00068">
        <property type="reaction ID" value="UER00171"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00070">
        <property type="reaction ID" value="UER00115"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004088">
        <property type="term" value="F:carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044205">
        <property type="term" value="P:'de novo' UMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006526">
        <property type="term" value="P:arginine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01424">
        <property type="entry name" value="MGS_CPS_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1030.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1380">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01210_B">
        <property type="entry name" value="CPSase_L_chain_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011761">
        <property type="entry name" value="ATP-grasp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006275">
        <property type="entry name" value="CarbamoylP_synth_lsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005480">
        <property type="entry name" value="CarbamoylP_synth_lsu_oligo"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036897">
        <property type="entry name" value="CarbamoylP_synth_lsu_oligo_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005479">
        <property type="entry name" value="CbamoylP_synth_lsu-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005483">
        <property type="entry name" value="CbamoylP_synth_lsu_CPSase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011607">
        <property type="entry name" value="MGS-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036914">
        <property type="entry name" value="MGS-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033937">
        <property type="entry name" value="MGS_CPS_CarB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016185">
        <property type="entry name" value="PreATP-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02786">
        <property type="entry name" value="CPSase_L_D2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02787">
        <property type="entry name" value="CPSase_L_D3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02142">
        <property type="entry name" value="MGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00098">
        <property type="entry name" value="CPSASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM01096">
        <property type="entry name" value="CPSase_L_D3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00851">
        <property type="entry name" value="MGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48108">
        <property type="entry name" value="SSF48108"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52335">
        <property type="entry name" value="SSF52335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52440">
        <property type="entry name" value="SSF52440"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01369">
        <property type="entry name" value="CPSaseII_lrg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50975">
        <property type="entry name" value="ATP_GRASP"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00867">
        <property type="entry name" value="CPSASE_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51855">
        <property type="entry name" value="MGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="13" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="13" id="KW-0055">Arginine biosynthesis</keyword>
    <keyword evidence="9 13 14" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 13 17" id="KW-0436">Ligase</keyword>
    <keyword evidence="10" id="KW-0460">Magnesium</keyword>
    <keyword evidence="12" id="KW-0464">Manganese</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8 13 14" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11 13" id="KW-0665">Pyrimidine biosynthesis</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 13" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="ATP-grasp" evidence="15">
        <location>
            <begin position="133"/>
            <end position="346"/>
        </location>
    </feature>
    <feature type="domain" description="ATP-grasp" evidence="15">
        <location>
            <begin position="707"/>
            <end position="919"/>
        </location>
    </feature>
    <feature type="domain" description="MGS-like" evidence="16">
        <location>
            <begin position="985"/>
            <end position="1120"/>
        </location>
    </feature>
    <feature type="region of interest" description="Carboxyphosphate synthetic domain" evidence="13">
        <location>
            <begin position="1"/>
            <end position="421"/>
        </location>
    </feature>
    <feature type="region of interest" description="Allosteric domain" evidence="13">
        <location>
            <begin position="985"/>
            <end position="1120"/>
        </location>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="303"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="317"/>
        </location>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="319"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="878"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>3</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="890"/>
        </location>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="892"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>4</label>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004812"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00009799"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01210"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00409"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS50975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="PROSITE" id="PS51855"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="CTQ76826.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="1120" mass="120674" checksum="63D6FD7BDF50065C" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AR03</accession>
    <name>A0A0M7AR03_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Potassium/proton antiporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">LAX5112_04876</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000033">
        <property type="protein sequence ID" value="CTQ77329.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04876"/>
    <dbReference type="EnsemblBacteria" id="CTQ77329">
        <property type="protein sequence ID" value="CTQ77329"/>
        <property type="gene ID" value="LAX5112_04876"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015299">
        <property type="term" value="F:solute:proton antiporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006812">
        <property type="term" value="P:cation transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1530.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006153">
        <property type="entry name" value="Cation/H_exchanger"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038770">
        <property type="entry name" value="Na+/solute_symporter_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00999">
        <property type="entry name" value="Na_H_Exchanger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 4" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2 4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="27"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="54"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="87"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="114"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="148"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="190"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="276"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="301"/>
            <end position="321"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="333"/>
            <end position="352"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="364"/>
            <end position="386"/>
        </location>
    </feature>
    <feature type="domain" description="Na_H_Exchanger" evidence="5">
        <location>
            <begin position="6"/>
            <end position="388"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00999"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ77329.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="418" mass="44672" checksum="53D779CFE9CD1C4A" modified="2015-12-09" version="1">MTQGLLMLGMFTVGYTLLAKKLSDSMLTAPMLFLGFGLLMAQTGFMPLDDAEALLHIVAEFALIVLLFLDAAQINLRSLRKNHEWPFRMLIIGLPLAVGIGTLAALPFTTAYPVVVAALVAALLAPTDAALGQAVVTNKKVPERVRSALTVESGLNDGMALPVVLLFASLTAQMMHTDTTNWILFGAKQLAFGPLVGAAIGVIGGKIFLLAKKHRMTTVQIEGIGALAMAGSAYLAAGMIDGNGFISAFVAGLLFGNVIKGHCGFIYEFTEGEGQMLTWGAFFLIGLALMPNAIAHLSFETLAIILISLFVVRPLAIWFSLMGTDAGPITRIFFGWFGPRGLATALFALLIVDEIDHEIGEQLLNLAVNAVWISAILHGVTAVPFAKWYAAHMASKDKAAEMEEVQPMRPDVSKEVLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARL3</accession>
    <name>A0A0M7ARL3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Thiamine kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04739</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000029">
        <property type="protein sequence ID" value="CTQ76890.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04739"/>
    <dbReference type="EnsemblBacteria" id="CTQ76890">
        <property type="protein sequence ID" value="CTQ76890"/>
        <property type="gene ID" value="LAX5112_04739"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002575">
        <property type="entry name" value="Aminoglycoside_PTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01636">
        <property type="entry name" value="APH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="SSF56112"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="APH" evidence="1">
        <location>
            <begin position="19"/>
            <end position="232"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01636"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76890.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="284" mass="31489" checksum="FC4DFEB2DAD6656B" modified="2015-12-09" version="1">MQSNPDLRAVLGEVLSAERKDGLSNQVLRITAQKGVFFLRIGQAGSEALVDRFAESHNLQLAADLGVAVPPVFMDPDSGLLLTRALETRLAGKTDFPDKLGQELARLHKSKLRFEGEINPHKTYAALRKRISEALDSYPEMSLSKDVSAIVPKLDRLMADVGVQNQPVLVPSHGDLSEGNCLLANNRLWLIDWEFSGMADPCWDLAYAIQEIGFDADDERRFLNAYESGQHRNIDRAALEVMKARCDAISALWAVVQLIDRRDPATFGPFALERAARALKQKPV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASG3</accession>
    <name>A0A0M7ASG3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04894</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000034">
        <property type="protein sequence ID" value="CTQ77392.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77392">
        <property type="protein sequence ID" value="CTQ77392"/>
        <property type="gene ID" value="LAX5112_04894"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="37"/>
            <end position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77392.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="64" mass="7221" checksum="D5D9A06D77FD00F9" modified="2015-12-09" version="1">MYPLELLRLLYVPALDQASWILGIAASALQRLRTAKKHRSTTAQCSDEDLQPVNENLQKRKDAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASI2</accession>
    <name>A0A0M7ASI2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Integrase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">Int-Tn</name>
        <name evidence="7" type="ORF">LAX5112_04901</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000034">
        <property type="protein sequence ID" value="CTQ77412.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674044.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000034.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77412">
        <property type="protein sequence ID" value="CTQ77412"/>
        <property type="gene ID" value="LAX5112_04901"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.130">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.443.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044068">
        <property type="entry name" value="CB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011010">
        <property type="entry name" value="DNA_brk_join_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013762">
        <property type="entry name" value="Integrase-like_cat_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002104">
        <property type="entry name" value="Integrase_catalytic"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010998">
        <property type="entry name" value="Integrase_recombinase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004107">
        <property type="entry name" value="Integrase_SAM-like_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14659">
        <property type="entry name" value="Phage_int_SAM_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00589">
        <property type="entry name" value="Phage_integrase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56349">
        <property type="entry name" value="SSF56349"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51900">
        <property type="entry name" value="CB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51898">
        <property type="entry name" value="TYR_RECOMBINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0229">DNA integration</keyword>
    <keyword evidence="3" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="2 4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Core-binding (CB)" evidence="6">
        <location>
            <begin position="5"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="domain" description="Tyr recombinase" evidence="5">
        <location>
            <begin position="110"/>
            <end position="303"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022908"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01248"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ77412.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="312" mass="35436" checksum="5AAB247076A86844" modified="2015-12-09" version="1">MTNNKTISDACKAWIKRCERDELERATLRSYRNHVDHHIEPAIGDRELSSLTRSHVRDFMDDMLDKNSRAITDKVLRSLRSALNEALDREWIDNNVALSVKLRRASRNAPDRIIPTKAEIKAMLETVPDKQRPLITTAIYTGMRMSELRGLRWEDVDFQKSIIRVRQRADRFNQIGKPKSKSGRRDIPMAPSVKKVLMSWKADCPTGDLDLVFPNGVGNVESPSNISNRVLYPLLKDADIVTAEGKPKFSFHALRHAAASLYIEQGWPAKKIQTLLGHASITMTFDVYGHLFDNAEDDVELFAKLEADLEAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ATU5</accession>
    <name>A0A0M7ATU5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Stalked cell differentiation-controlling protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">pleD_6</name>
        <name evidence="2" type="ORF">LAX5112_05010</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000040">
        <property type="protein sequence ID" value="CTQ77680.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674135.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000040.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_05010"/>
    <dbReference type="EnsemblBacteria" id="CTQ77680">
        <property type="protein sequence ID" value="CTQ77680"/>
        <property type="gene ID" value="LAX5112_05010"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd01949">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000160">
        <property type="entry name" value="GGDEF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035965">
        <property type="entry name" value="PAS-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00990">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00267">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55785">
        <property type="entry name" value="SSF55785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00254">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50887">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GGDEF" evidence="1">
        <location>
            <begin position="168"/>
            <end position="298"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77680.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="298" mass="32952" checksum="0299D6289CDC4E48" modified="2015-12-09" version="1">MFPPPDLNLFNCGLLITDADRRVLYANSFVLNEYGHDADVISAEGLSALFTRSSLILFDSYLYPMLLQEGVCQELQVIVKTADEERVPVLISVKHDTTGTGHHYWALFDATNRSKMYDELIETREKLQDQAESLANLAKRDALTGLLNRRELNEQFAMLLSQANRADRALSVLLIDIDHFKTINDEYGHQRGDTVLREFGGLLQKSCRTGDVAARYGGEEFVVLLPDTGITDAAKRADGIHEKLSGIEVGGLRFSVSIGISEKKAPVATDAENMIKKADEALYLAKNAGRGCTRLADA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZMF3</accession>
    <name>A0A0M6ZMF3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Cyclopropane-fatty-acyl-phospholipid synthase</fullName>
            <ecNumber evidence="3">2.1.1.79</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">cfa_1</name>
        <name evidence="3" type="ORF">LAX5112_00120</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the CFA/CMAS family.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.79" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63939.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670149.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00120"/>
    <dbReference type="EnsemblBacteria" id="CTQ63939">
        <property type="protein sequence ID" value="CTQ63939"/>
        <property type="gene ID" value="LAX5112_00120"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008825">
        <property type="term" value="F:cyclopropane-fatty-acyl-phospholipid synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008610">
        <property type="term" value="P:lipid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003333">
        <property type="entry name" value="Mycolic_cyclopropane_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF003085">
        <property type="entry name" value="CMAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="active site" evidence="2">
        <location>
            <position position="389"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010815"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR003085-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ63939.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="409" mass="46584" checksum="C2698FC34C862CC3" modified="2015-12-09" version="1">MNGPIVLSEDNLRTELKGTPRLARMAANLAINIRYGTLDVTFPDGRMFRINGTEPGPDGVLKIHNWKFFTMAVKGGDVGVGEAFMAGYWSSPDVTTFLEIFALNQASTLEALRGRPLARLLLSLRHWLNANTKRGSKRNISAHYDLGNAFYQEWLDPSMTYSSAIFSNETNSLEQAQFEKYASLVRQTGIEPGHSVLEIGCGWGGFAEHVAKTVGANVRGLTISREQYDYARERIFKAGLNEKVEIVFQDYRDEKGVYDRIASIEMFEAVGEKYWPTYFEKVSDCLKPGGKAGLQIITIQDQMFEDYRSGTDFIQRYIFPGGMLPPPGKLSEIGKSLGLDLKDQKIFGQDYARTLLEWRQRFRTAWPQIRPMGFDERFKRLWEFYLHYCEAGFRSGNIDVRQLVYEKAT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZNB3</accession>
    <name>A0A0M6ZNB3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Poly-beta-hydroxybutyrate polymerase</fullName>
            <ecNumber evidence="6">2.3.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">phbC</name>
        <name evidence="6" type="ORF">LAX5112_00043</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EC" id="2.3.1.-" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63721.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670104.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00043"/>
    <dbReference type="EnsemblBacteria" id="CTQ63721">
        <property type="protein sequence ID" value="CTQ63721"/>
        <property type="gene ID" value="LAX5112_00043"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016746">
        <property type="term" value="F:acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042619">
        <property type="term" value="P:poly-hydroxybutyrate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010963">
        <property type="entry name" value="PHA_synth_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010941">
        <property type="entry name" value="PhaC_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07167">
        <property type="entry name" value="PhaC_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01838">
        <property type="entry name" value="PHA_synth_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 6" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PhaC_N" evidence="5">
        <location>
            <begin position="113"/>
            <end position="284"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF07167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ63721.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="601" mass="68190" checksum="0677D831F2EE2412" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPB9</accession>
    <name>A0A0M6ZPB9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">HTH-type transcriptional activator CmpR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">cmpR_1</name>
        <name evidence="3" type="ORF">LAX5112_00340</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64619.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008196013.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ64619">
        <property type="protein sequence ID" value="CTQ64619"/>
        <property type="gene ID" value="LAX5112_00340"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00039">
        <property type="entry name" value="HTHLYSR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="2"/>
            <end position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ64619.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="291" mass="32279" checksum="4CD15E212F0E3E89" modified="2015-12-09" version="1">MLDLDQLRTFVAIAESGSFTKAADNVHKTQSAVSMQMRRLEERIGKPLFVRVGRQSRLTEHGERLLHYARRLVQLNDETLAAFDDTELAGLVRLGTPDDYADRFLPEILARFSRSNPKAEVSVVCAPTPNLADMIGEGELDVAIITHVQKKGRKNVEILRREPLLWVASARHATENEAVLPMALGRATCDWRKAALSALEDQLREYRLLYSSWNSTAVGAAVLAGLAISVLPESALRSGMRVLTEADGFPRLPECEIGIMRSWHNNSRVTDALVEHIMSSLDNLSVPQAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQQ9</accession>
    <name>A0A0M6ZQQ9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00082</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63834.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00082"/>
    <dbReference type="EnsemblBacteria" id="CTQ63834">
        <property type="protein sequence ID" value="CTQ63834"/>
        <property type="gene ID" value="LAX5112_00082"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.1140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003795">
        <property type="entry name" value="DUF192"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038695">
        <property type="entry name" value="Saro_0823-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37953">
        <property type="entry name" value="PTHR37953"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02643">
        <property type="entry name" value="DUF192"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005808899" evidence="1">
        <location>
            <begin position="32"/>
            <end position="165"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ63834.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="165" mass="17672" checksum="70F42DE67B3327C4" modified="2015-12-09" version="1">MNAYHLPRSVALALCLSFAILLSAVSNGSFAGNSQTLPTEQLTVISGVNEHRFTVEVASTDTQRAKGLMFREEMAAEHGMLFIFDGEFERHFWMKNTPLPLDIIFISSDGKIVSIAADTTPYSEKVIPSGAPAKFVLELNAGIAAKLGIKPGDEVVAGSMGLNDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZR46</accession>
    <name>A0A0M6ZR46_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">C4-dicarboxylate-binding periplasmic protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">dctP_1</name>
        <name evidence="4" type="ORF">LAX5112_00353</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the bacterial solute-binding protein 7 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64656.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670342.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00353"/>
    <dbReference type="EnsemblBacteria" id="CTQ64656">
        <property type="protein sequence ID" value="CTQ64656"/>
        <property type="gene ID" value="LAX5112_00353"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071702">
        <property type="term" value="P:organic substance transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.190.170">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018389">
        <property type="entry name" value="DctP_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038404">
        <property type="entry name" value="TRAP_DctP_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33376">
        <property type="entry name" value="PTHR33376"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03480">
        <property type="entry name" value="DctP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005808909" evidence="3">
        <location>
            <begin position="27"/>
            <end position="338"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ64656.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="338" mass="36668" checksum="81BD0C8AD88DCBCE" modified="2015-12-09" version="1">MLTSLKAATAVSAGALALIFATETFAADVTWNVSLWGKRRAFTEHVEKLAEQVAQKTDGKFEIVLHYGGALSKSRENLDGISFGAFEMAQFCASYHADKNPTLTVLELPFLGVSDLETEVKVSKALYEHPAVQQDLGRWNAKLLMPSPMPQYNFAGKGDAPVSVSDFDGMRVRALGGLGKLMEAAGAVPTSVTASETYQAIDSGTVQAAGFAPHAHLSFRVVEVADWWTKNLNPGTVHCPIVVNTDAYAALPDDFKAALDSSVDPALDHYLATYAKVYDKWWPELENRGVQQIEYSDAELAAFAEKAGPIQQAWIEEQTANGLPAQELLDMVKKTIAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZR51</accession>
    <name>A0A0M6ZR51_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Copper outer membrane regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">comR_1</name>
        <name evidence="3" type="ORF">LAX5112_00109</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63903.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670143.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ63903">
        <property type="protein sequence ID" value="CTQ63903"/>
        <property type="gene ID" value="LAX5112_00109"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023772">
        <property type="entry name" value="DNA-bd_HTH_TetR-type_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036271">
        <property type="entry name" value="Tet_transcr_reg_TetR-rel_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00440">
        <property type="entry name" value="TetR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00455">
        <property type="entry name" value="HTHTETR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48498">
        <property type="entry name" value="SSF48498"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01081">
        <property type="entry name" value="HTH_TETR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50977">
        <property type="entry name" value="HTH_TETR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH tetR-type" evidence="2">
        <location>
            <begin position="12"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="1">
        <location>
            <begin position="35"/>
            <end position="54"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ63903.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="206" mass="22714" checksum="C32161AE8631EC6C" modified="2015-12-09" version="1">MTMERKRGRPRSFDETAILDKIMQVFWEHGYSATSLDQIAEATNLNRPSLYAAFGSKKDMYLKVINRFADMMQAHLAAAGDFDGPLNARFKAILLAAIDLYTGKTPVSASRFGCLAISTLPAETTQDPEFLDALNKVMSRMDRGFARLIETGSNNRFETEEAAQIGQQFAVMLHGISVRARAGENTNSLKALAGNMVDRLLPEDSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRG0</accession>
    <name>A0A0M6ZRG0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Hemin uptake protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00411</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64811.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451480.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ64811">
        <property type="protein sequence ID" value="CTQ64811"/>
        <property type="gene ID" value="LAX5112_00411"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019600">
        <property type="entry name" value="Hemin_uptake_protein_HemP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10636">
        <property type="entry name" value="hemP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="39"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64811.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="70" mass="7844" checksum="98D94921DB1F5082" modified="2015-12-09" version="1">MTPSTNSRKQRLSLSMPGARPAYTKVPVSKGKPQLKSDDLFSGTREINILHNDDTYRLTITKQGKLILTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZS37</accession>
    <name>A0A0M6ZS37_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">D-ribose-binding periplasmic protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">rbsB_1</name>
        <name evidence="3" type="ORF">LAX5112_00481</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65016.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670432.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00481"/>
    <dbReference type="EnsemblBacteria" id="CTQ65016">
        <property type="protein sequence ID" value="CTQ65016"/>
        <property type="gene ID" value="LAX5112_00481"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025997">
        <property type="entry name" value="SBP_2_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13407">
        <property type="entry name" value="Peripla_BP_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809047" evidence="1">
        <location>
            <begin position="27"/>
            <end position="320"/>
        </location>
    </feature>
    <feature type="domain" description="Peripla_BP_4" evidence="2">
        <location>
            <begin position="35"/>
            <end position="295"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13407"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ65016.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="320" mass="34423" checksum="25A3F28CEEB31C1E" modified="2015-12-09" version="1">MTQSLRALLIASTAAAGMAFAGAASAETMKIGITQNNVGVDSYQTTYEKAFIEAADANADVETVVLDAGGDVARQIAQMEDLIQQAVDAIIIWPTNGEAVIPAVRKAHKAGIPVIVTNSNIAEQGFDFVKSFSGPDNITQGKRSAEIMCDKFKEMGIENEAQVVHITGQPGYTTAIERAKGFDDRLPEVCPNVTQIDKQPGDWNREKSQKVMEAFLVKYDDIDGVYAGDDNMGVGALNAAKAAGREGIIFVGATNFAVGYEAMERGEYWGSIYQSPVDDAKAALKTAVAVLNGEEIPFLNYFDTPKITQDNMAEFDKPVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZS92</accession>
    <name>A0A0M6ZS92_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">DNA polymerase III subunit gamma/tau</fullName>
            <ecNumber evidence="1">2.7.7.7</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">dnaX_1</name>
        <name evidence="1" type="ORF">LAX5112_00281</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.7.7.7" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64394.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670261.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00281"/>
    <dbReference type="EnsemblBacteria" id="CTQ64394">
        <property type="protein sequence ID" value="CTQ64394"/>
        <property type="gene ID" value="LAX5112_00281"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003887">
        <property type="term" value="F:DNA-directed DNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ64394.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="355" mass="38742" checksum="5AB09FCE9FCC76D5" modified="2015-12-09" version="1">MARKNEPIETPEVDALPGVPLPHQRNVLIGHGETETSLLDAYRSERLHHAWILGGPKGIGKATLAFRFAKFVLAHPDRFGPQAAMAQDLSVPEDHPVVRQVAAGGHPNILHLRRPWDDKGKRFKTDLPVDEVRRTVSFFGTTASARAWRVCIVDAADDMNASSANALLKILEEPPERCLFLVLSHAPGRLLPTIRSRCRRLDLAPLSETDIANGLRDLAGHTIPDASGLSEIAQTADGSLRAALTLLAGDGLAIAQGTRKLAEAGSQMDLKALHALSDLVAARGQTDNWESFQHVAETWLHGQMRRSIAAGTGAAYAYVKLWEGTRKAIVESDSLNLDRKQVVLDFFLNLRSVRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTS5</accession>
    <name>A0A0M6ZTS5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Hemin transport system permease protein HmuU</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">hmuU_2</name>
        <name evidence="8" type="ORF">LAX5112_00697</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65616.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670636.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00697"/>
    <dbReference type="EnsemblBacteria" id="CTQ65616">
        <property type="protein sequence ID" value="CTQ65616"/>
        <property type="gene ID" value="LAX5112_00697"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3470.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037294">
        <property type="entry name" value="ABC_BtuC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000522">
        <property type="entry name" value="ABC_transptr_permease_BtuC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30472">
        <property type="entry name" value="PTHR30472"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01032">
        <property type="entry name" value="FecCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81345">
        <property type="entry name" value="SSF81345"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="33"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="94"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="126"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="156"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="189"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="237"/>
            <end position="255"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="283"/>
            <end position="309"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="321"/>
            <end position="341"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="348"/>
            <end position="369"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007935"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ65616.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="377" mass="38405" checksum="2741F9D17FD2882B" modified="2015-12-09" version="1">MTDAPLSRQGSRLAGIFGLTALQHGDRASIARWVIAALAMLLIATMIGSLATGPILVPVFDLLPHIPVHLANPSAPLPETVSARDWIVVMDIRLPRITLGALIGAALAVSGAVMQGLFRNPLADPGIVGVSAGAGLGAALFIVLGNAALAPVMTVLGIYTIPFAAFAGGLINTLLLYRIGTRGGFTSVATLLLAGIALGALTGAITGLLVYVADDSQLRDLQFWGLGSLAGANWEKVASAAPIILTMLVATPFLARGLNALTLGEAAAAHIGIRVQRLKNISILLVAAATGASVAVSGGIGFVGIVVPHLLRLSIGPDHKFLLPAAALLGAILLIGADTLARTIVAPAELPIGIITAVVGAPFFLWILLRNRGLTGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZU58</accession>
    <name>A0A0M6ZU58_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">Na(+)-translocating NADH-quinone reductase subunit B</fullName>
            <shortName evidence="13">Na(+)-NQR subunit B</shortName>
            <shortName evidence="13">Na(+)-translocating NQR subunit B</shortName>
            <ecNumber evidence="13">7.2.1.1</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="13">NQR complex subunit B</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="13">NQR-1 subunit B</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="13 15" type="primary">nqrB</name>
        <name evidence="15" type="ORF">LAX5112_00741</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="13">NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="13">
            <text>a ubiquinone + H(+) + n Na(+)(in) + NADH = a ubiquinol + n Na(+)(out) + NAD(+)</text>
            <dbReference type="Rhea" id="RHEA:47748"/>
            <dbReference type="Rhea" id="RHEA-COMP:9565"/>
            <dbReference type="Rhea" id="RHEA-COMP:9566"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16389"/>
            <dbReference type="ChEBI" id="CHEBI:17976"/>
            <dbReference type="ChEBI" id="CHEBI:29101"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="EC" id="7.2.1.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="13 14">
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="13">Composed of six subunits; NqrA, NqrB, NqrC, NqrD, NqrE and NqrF.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="13">Cell membrane</location>
            <topology evidence="13">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="13">Belongs to the NqrB/RnfD family.</text>
    </comment>
    <dbReference type="EC" id="7.2.1.1" evidence="13"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65746.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670670.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00741"/>
    <dbReference type="EnsemblBacteria" id="CTQ65746">
        <property type="protein sequence ID" value="CTQ65746"/>
        <property type="gene ID" value="LAX5112_00741"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010181">
        <property type="term" value="F:FMN binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016655">
        <property type="term" value="F:oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022904">
        <property type="term" value="P:respiratory electron transport chain"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006814">
        <property type="term" value="P:sodium ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00426">
        <property type="entry name" value="NqrB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010966">
        <property type="entry name" value="NqrB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004338">
        <property type="entry name" value="NqrB/RnfD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30578">
        <property type="entry name" value="PTHR30578"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03116">
        <property type="entry name" value="NQR2_RnfD_RnfE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF016055">
        <property type="entry name" value="NADH-UbQ_OxRdtase_B_su"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01937">
        <property type="entry name" value="nqrB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="2 13" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 13 14" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="6 13 14" id="KW-0288">FMN</keyword>
    <keyword evidence="11 13" id="KW-0406">Ion transport</keyword>
    <keyword evidence="12 13" id="KW-0472">Membrane</keyword>
    <keyword evidence="10 13" id="KW-0520">NAD</keyword>
    <keyword evidence="15" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4 13 14" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="13" id="KW-0915">Sodium</keyword>
    <keyword evidence="13" id="KW-0739">Sodium transport</keyword>
    <keyword evidence="8 13" id="KW-1278">Translocase</keyword>
    <keyword evidence="7 13" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 13" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="1 13" id="KW-0813">Transport</keyword>
    <keyword evidence="13" id="KW-0830">Ubiquinone</keyword>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="56"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="115"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="158"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="254"/>
            <end position="276"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="283"/>
            <end position="301"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="313"/>
            <end position="331"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="343"/>
            <end position="361"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="367"/>
            <end position="387"/>
        </location>
    </feature>
    <feature type="modified residue" description="FMN phosphoryl threonine" evidence="13 14">
        <location>
            <position position="226"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022519"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00426"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="PIRSR" id="PIRSR016055-50"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="CTQ65746.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="399" mass="43307" checksum="4D01099D6BBAC56D" modified="2015-12-09" version="1">MGLRNFFDRIEPNFVKGGKYEKFFPIYEMVESFLYTPKTVTTAAPHARSYIDMKRIMTYVVIATIPCILVGLYNVGFQINSAIATYGASGWRAWIIDALGIGFNPANPLANILHGALYFLPIYITTLVVGGICEVIFATVRGHEVNEGFLVTSMLYALILPPSAPLWQVALGIAFGVVIGKEVFGGTGKNFLNPALTGRAFLYFAYPAQMSGDTIWTPVDGFSGATALSVGASDGYQQLAAHGVSWMDAVLGTIQGSIGEVSALACFIGLAFLLITKIANWRLVVGCLVGMIAFSTLLNLIGSDTNPMFAMPWYWHLVIGGYAFGLAFMVTEPVSASHTNLGRYIYGALIGVMVVMIRVINPAFPEGMMLAILFGNVFAPLIDYFVVQANIKRRAKRHA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUD3</accession>
    <name>A0A0M6ZUD3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glycosyl hydrolases family 43</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00719</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65680.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670654.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00719"/>
    <dbReference type="EnsemblBacteria" id="CTQ65680">
        <property type="protein sequence ID" value="CTQ65680"/>
        <property type="gene ID" value="LAX5112_00719"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.115.10.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023296">
        <property type="entry name" value="Glyco_hydro_beta-prop_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75005">
        <property type="entry name" value="SSF75005"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="61"/>
            <end position="80"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65680.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="500" mass="55451" checksum="2C2FD76E4EF384D6" modified="2015-12-09" version="1">MRIGIVVETDRCRRWLLHLSELLKTSQSEEVVYQLIKPSPLVSRELQTALQFEERVLGTDPFSGMSGLDPSELPQTSGKDTDLAFDLTASGSGSSGSKTFEVRYNGACGEEALFSALMTKGTPLIEVIDRQAGTVAACGTASLEAARGLGGAMDAVFSRVAVLIKKVVEGSHAHGTPMKAEVLQAVTQKQVLIRMLRETAVTLIRSVYRAFFYTSHWRVGWRFTDGEGVAGTRDLSGKPWQVLKSPHDTFFADPFPIETDGRHYLFFEALPHETQKGVISMLEITKDGPVGEASTVLEEPWHLSYPFVFERDGEFWMIPESSSNNEVVLYRAARFPGQWERHTVLLSGVEAADATIIEHEGRFWMFAVTRNAVGGYSDCLSLYYADDLFGPWQAHQKNPVLVDDRAARPAGRFFLHAGELWRPVQDCRNSYGAALAFARVDELSPTTFQQSVHETLTPGPLWPGRKLHTLNKAGGLEVIDGCTYHPKSELAAKMKAFFDR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="33" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWR1</accession>
    <name>A0A0M6ZWR1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 6">GTPase Era</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6 13" type="primary">era</name>
        <name evidence="13" type="ORF">LAX5112_01064</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Monomer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="6">Cell membrane</location>
            <topology evidence="6">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 6 8 9">Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Era GTPase family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66707.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01064"/>
    <dbReference type="EnsemblBacteria" id="CTQ66707">
        <property type="protein sequence ID" value="CTQ66707"/>
        <property type="gene ID" value="LAX5112_01064"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070181">
        <property type="term" value="F:small ribosomal subunit rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042274">
        <property type="term" value="P:ribosomal small subunit biogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd04163">
        <property type="entry name" value="Era"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00367">
        <property type="entry name" value="GTPase_Era"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030388">
        <property type="entry name" value="G_ERA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006073">
        <property type="entry name" value="GTP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005662">
        <property type="entry name" value="GTP-bd_Era"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015946">
        <property type="entry name" value="KH_dom-like_a/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004044">
        <property type="entry name" value="KH_dom_type_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009019">
        <property type="entry name" value="KH_sf_prok-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005225">
        <property type="entry name" value="Small_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42698">
        <property type="entry name" value="PTHR42698"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07650">
        <property type="entry name" value="KH_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01926">
        <property type="entry name" value="MMR_HSR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54814">
        <property type="entry name" value="SSF54814"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00436">
        <property type="entry name" value="era"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00231">
        <property type="entry name" value="small_GTP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51713">
        <property type="entry name" value="G_ERA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50823">
        <property type="entry name" value="KH_TYPE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 6 8" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="6" id="KW-0472">Membrane</keyword>
    <keyword evidence="3 6 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0690">Ribosome biogenesis</keyword>
    <keyword evidence="4 6 7" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="6" id="KW-0699">rRNA-binding</keyword>
    <feature type="domain" description="Era-type G" evidence="12">
        <location>
            <begin position="44"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="domain" description="KH type-2" evidence="11">
        <location>
            <begin position="242"/>
            <end position="319"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="region of interest" description="G1" evidence="8">
        <location>
            <begin position="52"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="region of interest" description="G2" evidence="8">
        <location>
            <begin position="78"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="region of interest" description="G3" evidence="8">
        <location>
            <begin position="99"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="region of interest" description="G4" evidence="8">
        <location>
            <begin position="161"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="region of interest" description="G5" evidence="8">
        <location>
            <begin position="190"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="10">
        <location>
            <begin position="1"/>
            <end position="17"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="52"/>
            <end position="59"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="99"/>
            <end position="103"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="161"/>
            <end position="164"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007921"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00020484"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00367"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00118"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01050"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU003761"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50823"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS51713"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="CTQ66707.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="337" mass="37769" checksum="090662ADBC2CAD96" modified="2015-12-09" version="1">MSDETSNEPDDFETDDDGTEFVAPKGRFDIPLPDPLGAMPSDTKAGFVALIGAPNAGKSTLINQLVGTKVSIVTHKVQTTRSIVRGVAMHGTAQLVFIDTPGIFKPKRRLDRAMVDTAWGGARDADVIALLIDARKGIDEEVEQILKRLKGQSAPKVLILNKTDVANREKLLKLAQKANEYLEFEETFMVSALTGDGTQQILDYFASKMPDGPWLYPEDQPSDLPLRILAAEITREKLFERLHQELPYISTVETERWETKKDGSARIEQTIYVERDSQKSIVLGKKGQTIKQISQASRSEISDIIEAPVHLFLFVKVRENWADDPERYREMGLEFPK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZX02</accession>
    <name>A0A0M6ZX02_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 9">Urocanate hydratase</fullName>
            <shortName evidence="9">Urocanase</shortName>
            <ecNumber evidence="4 9">4.2.1.49</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8 9">Imidazolonepropionate hydrolase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9 14" type="primary">hutU</name>
        <name evidence="14" type="ORF">LAX5112_00849</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Catalyzes the conversion of urocanate to 4-imidazolone-5-propionate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 9">
            <text>4-imidazolone-5-propanoate = H2O + trans-urocanate</text>
            <dbReference type="Rhea" id="RHEA:13101"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:17771"/>
            <dbReference type="ChEBI" id="CHEBI:77893"/>
            <dbReference type="EC" id="4.2.1.49"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="9">
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </cofactor>
        <text evidence="9">Binds 1 NAD(+) per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2 9">Amino-acid degradation; L-histidine degradation into L-glutamate; N-formimidoyl-L-glutamate from L-histidine: step 2/3.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 9">Belongs to the urocanase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.49" evidence="4 9"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66043.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670751.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00849"/>
    <dbReference type="EnsemblBacteria" id="CTQ66043">
        <property type="protein sequence ID" value="CTQ66043"/>
        <property type="gene ID" value="LAX5112_00849"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00379">
        <property type="reaction ID" value="UER00550"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016153">
        <property type="term" value="F:urocanate hydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019556">
        <property type="term" value="P:histidine catabolic process to glutamate and formamide"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019557">
        <property type="term" value="P:histidine catabolic process to glutamate and formate"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10730">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00577">
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    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="Urocanase"/>
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    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17391">
        <property type="entry name" value="Urocanase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001423">
        <property type="entry name" value="Urocanate_hydrat"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01233">
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        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0963">Cytoplasm</keyword>
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        <location>
            <begin position="14"/>
            <end position="137"/>
        </location>
    </feature>
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            <end position="348"/>
        </location>
    </feature>
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        <location>
            <begin position="351"/>
            <end position="545"/>
        </location>
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    <feature type="region of interest" description="Disordered" evidence="10">
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            <begin position="444"/>
            <end position="463"/>
        </location>
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        </location>
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        <location>
            <begin position="52"/>
            <end position="53"/>
        </location>
        <ligand>
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            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
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        <location>
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        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
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        <location>
            <begin position="176"/>
            <end position="178"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
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        <location>
            <position position="196"/>
        </location>
        <ligand>
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            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="242"/>
            <end position="243"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
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        <location>
            <begin position="263"/>
            <end position="267"/>
        </location>
        <ligand>
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        </ligand>
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    <feature type="binding site" evidence="9">
        <location>
            <begin position="273"/>
            <end position="274"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="322"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
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    <feature type="binding site" evidence="9">
        <location>
            <position position="492"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
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        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
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            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00031640"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00577"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
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        <source>
            <dbReference type="Pfam" id="PF01175"/>
        </source>
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        <source>
            <dbReference type="Pfam" id="PF17391"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="Pfam" id="PF17392"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="EMBL" id="CTQ66043.1"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="557" mass="61274" checksum="D108E62CA77FD281" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZX07</accession>
    <name>A0A0M6ZX07_9HYPH</name>
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        <submittedName>
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        </submittedName>
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        <name type="scientific">Roseibium alexandrii</name>
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                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
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        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
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        </source>
    </reference>
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    </dbReference>
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    </dbReference>
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    </dbReference>
    <proteinExistence type="predicted"/>
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    <keyword evidence="2" id="KW-0813">Transport</keyword>
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            <end position="45"/>
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            <end position="117"/>
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        </source>
    </evidence>
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        <source>
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        </source>
    </evidence>
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        <source>
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        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
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    </evidence>
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        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ66817.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="196" mass="21055" checksum="ED542727D5B9EA80" modified="2015-12-09" version="1">MGALLAVLKPLAFVNSHLLRIGRGIGVVAVALMVVAILIQVVARYGLNNALPWPDEAARFCMLWMTGLMAPTAFRRGGFVAIDTLVIMLPKILASVLSLFLLLVSLVVLLVAVQIGYAEVTGFGGRFATASLYVPGNLTLTEWIRVPRSWMMMSMFVGVILLALVNVELILRSLISLIGGKDHLPNIPDADMAGAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZX82</accession>
    <name>A0A0M6ZX82_9HYPH</name>
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        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
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        <name type="scientific">Roseibium alexandrii</name>
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        <lineage>
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            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
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            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
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            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
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        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67359">
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        <property type="gene ID" value="LAX5112_01350"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67359.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="46" mass="5459" checksum="86811D8C597FBFCC" modified="2015-12-09" version="1">MLYLHQRTCANKPVVSQMQPPRKGIYRPPSWIYYGTKFGFARLFNP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXD7</accession>
    <name>A0A0M6ZXD7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01122</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66866.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ66866">
        <property type="protein sequence ID" value="CTQ66866"/>
        <property type="gene ID" value="LAX5112_01122"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ66866.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="39" mass="4194" checksum="0D1F8F36A138EE0F" modified="2015-12-09" version="1">MSRKSYNIITLIQDRSKQGAGLATVGQLSNICTSGLRVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXH0</accession>
    <name>A0A0M6ZXH0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 7">Lysozyme</fullName>
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        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">sleB_1</name>
        <name evidence="10" type="ORF">LAX5112_01376</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
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            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>Hydrolysis of (1-&gt;4)-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues in a peptidoglycan and between N-acetyl-D-glucosamine residues in chitodextrins.</text>
            <dbReference type="EC" id="3.2.1.17"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the glycosyl hydrolase 24 family.</text>
    </comment>
    <dbReference type="EC" id="3.2.1.17" evidence="2 7"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67409.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671180.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01376"/>
    <dbReference type="EnsemblBacteria" id="CTQ67409">
        <property type="protein sequence ID" value="CTQ67409"/>
        <property type="gene ID" value="LAX5112_01376"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030430">
        <property type="term" value="C:host cell cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003796">
        <property type="term" value="F:lysozyme activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016998">
        <property type="term" value="P:cell wall macromolecule catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019835">
        <property type="term" value="P:cytolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042742">
        <property type="term" value="P:defense response to bacterium"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009253">
        <property type="term" value="P:peptidoglycan catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00737">
        <property type="entry name" value="lyz_endolysin_autolysin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.101.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.530.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033907">
        <property type="entry name" value="Endolysin_autolysin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002196">
        <property type="entry name" value="Glyco_hydro_24"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023346">
        <property type="entry name" value="Lysozyme-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023347">
        <property type="entry name" value="Lysozyme_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002477">
        <property type="entry name" value="Peptidoglycan-bd-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036365">
        <property type="entry name" value="PGBD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036366">
        <property type="entry name" value="PGBDSf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01471">
        <property type="entry name" value="PG_binding_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00959">
        <property type="entry name" value="Phage_lysozyme"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47090">
        <property type="entry name" value="SSF47090"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53955">
        <property type="entry name" value="SSF53955"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 7" id="KW-0929">Antimicrobial</keyword>
    <keyword evidence="4 7" id="KW-0081">Bacteriolytic enzyme</keyword>
    <keyword evidence="7" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="6" id="KW-1035">Host cytoplasm</keyword>
    <keyword evidence="5 7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="232"/>
            <end position="253"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="259"/>
            <end position="279"/>
        </location>
    </feature>
    <feature type="domain" description="PG_binding_1" evidence="9">
        <location>
            <begin position="170"/>
            <end position="227"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000632"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012732"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022529"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022638"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023200"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003788"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF01471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ67409.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="296" mass="31833" checksum="4DCD963ADF3BEC41" modified="2015-12-09" version="1">MKVSDQGLAFLAAHEGYVSRGYLDPAGVVTIGYGFTMRSRIFAGWWRKRHGRGLAVGDRISRDQANKLLLTLLDEEYAPPVRQDLPGLPQTQFDACVSVVYNLGSRALSWRWAQQLKAGKVSEAARLLTQTGLTAGGQRLKGLVKRRTAEARLLEHGDYGLAAAAAPPAPGSDIMELQRSLKMLGFDPGPIDGFFGAQTKAAVKDFQKAYPPLAVDGIPGPATRSALERAIALRNGTGLVGILTLLTGSGLLLEDLSGALAALILTGVPSLSAILLWLWQRRGAIFLWLKENLSSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXU9</accession>
    <name>A0A0M6ZXU9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">4-formylbenzenesulfonate dehydrogenase TsaC1/TsaC2</fullName>
            <ecNumber evidence="1">1.2.1.62</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">tsaC1_1</name>
        <name evidence="1" type="ORF">LAX5112_01412</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.2.1.62" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67519.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671244.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01412"/>
    <dbReference type="EnsemblBacteria" id="CTQ67519">
        <property type="protein sequence ID" value="CTQ67519"/>
        <property type="gene ID" value="LAX5112_01412"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018482">
        <property type="term" value="F:4-formylbenzenesulfonate dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67519.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="243" mass="25364" checksum="FF207E7D9053B181" modified="2015-12-09" version="1">MRFSNKKVLLTGAAGGMGQVITRMLRDEGAAVAVADFKCDDLSAEAALPGDLLDQAYTEDLPNAAAKALGGLDIIINNAGVITRGPVTDTSDRDWDLSVGVNVEAPFRICRAGIPILAEGGGGAIVNLASCWGVHPGPNHAVYCMTKAAIASLTQCMGRDHAHQGVRINAVCPNEVDTPMLRSGFEKRGFDPETAIYELGKTVPLGRVAKPDDIADVVLFLASDAARYMCGALVEVNGGKSVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYC0</accession>
    <name>A0A0M6ZYC0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Exported protein 10</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">cinA</name>
        <name evidence="2" type="ORF">LAX5112_01466</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67649.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671285.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01466"/>
    <dbReference type="EnsemblBacteria" id="CTQ67649">
        <property type="protein sequence ID" value="CTQ67649"/>
        <property type="gene ID" value="LAX5112_01466"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00885">
        <property type="entry name" value="cinA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.980.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036425">
        <property type="entry name" value="MoaB/Mog-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001453">
        <property type="entry name" value="MoaB/Mog_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00994">
        <property type="entry name" value="MoCF_biosynth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00852">
        <property type="entry name" value="MoCF_biosynth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53218">
        <property type="entry name" value="SSF53218"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MoCF_biosynth" evidence="1">
        <location>
            <begin position="13"/>
            <end position="173"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00852"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67649.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="247" mass="26259" checksum="D1EC157351AD3F29" modified="2015-12-09" version="1">MTADKADDIVTAAFLVIGDEILSGRTKDKNIGFLADYLTALGIDLSEVRIVPDVQAEIVGAVNALRTKYTYVFTSGGIGPTHDDITAEAVAAAFDVPLNLDARAVAIMEKHYPPGQFTPARQRMARIPEGADLIENKVSKAPGFRIGNVHVMAGVPAIMQAMMDAVAPTLQTGKKMLSETVAANMPESRIAERLAAIQDAHPETLIGSYPKATDGKFTTQIVIRSRDETILAAAAQDVARAVDDLSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYH4</accession>
    <name>A0A0M6ZYH4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Probable branched-chain-amino-acid aminotransferase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">ilvE_1</name>
        <name evidence="8" type="ORF">LAX5112_01547</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Acts on leucine, isoleucine and valine.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 7">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="3 6">Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67858.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671344.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01547"/>
    <dbReference type="EnsemblBacteria" id="CTQ67858">
        <property type="protein sequence ID" value="CTQ67858"/>
        <property type="gene ID" value="LAX5112_01547"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008483">
        <property type="term" value="F:transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.470.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001544">
        <property type="entry name" value="Aminotrans_IV"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018300">
        <property type="entry name" value="Aminotrans_IV_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036038">
        <property type="entry name" value="Aminotransferase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043132">
        <property type="entry name" value="BCAT-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043131">
        <property type="entry name" value="BCAT-like_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01063">
        <property type="entry name" value="Aminotran_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56752">
        <property type="entry name" value="SSF56752"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00770">
        <property type="entry name" value="AA_TRANSFER_CLASS_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="5 7" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00003109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009320"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00014472"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU004106"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU004516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ67858.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="285" mass="31481" checksum="2C00A035CEC3DC1A" modified="2015-12-09" version="1">MSGWSDTWTWIDGTWHEGNPPIMGPRTHASWLGSSVFDGARFFDGVMPDIDLHSQRVNDSAVALGMKPTMKIGEMVELTKEGCAKFGSDTQIYVKPMYWVEGDGPGVISGDPDSTRFCLCLFDAPMAPKDAASSITLSPFRRPTMECMPVNAKAGCLYPNNARAMLEAKGRGFDNAVVRDMLGNVAELTSANIFMAKDGKVHTPAPNGTFLNGITRQRVIHLLRSAGYDVFERTLGYDEFLEADEIFSTGNYNKVTPVNRIEERDLQPGPIAARARDLYWEFSHA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYK0</accession>
    <name>A0A0M6ZYK0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Adenylate cyclase 1</fullName>
            <ecNumber evidence="3">4.6.1.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">cyaA_6</name>
        <name evidence="3" type="ORF">LAX5112_01310</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="4.6.1.1" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67286.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671135.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01310"/>
    <dbReference type="EnsemblBacteria" id="CTQ67286">
        <property type="protein sequence ID" value="CTQ67286"/>
        <property type="gene ID" value="LAX5112_01310"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004016">
        <property type="term" value="F:adenylate cyclase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009190">
        <property type="term" value="P:cyclic nucleotide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035556">
        <property type="term" value="P:intracellular signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07302">
        <property type="entry name" value="CHD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1230">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001054">
        <property type="entry name" value="A/G_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00211">
        <property type="entry name" value="Guanylate_cyc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00044">
        <property type="entry name" value="CYCc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50125">
        <property type="entry name" value="GUANYLATE_CYCLASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0456">Lyase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="39"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="69"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="96"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="126"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="152"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="192"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="domain" description="Guanylate cyclase" evidence="2">
        <location>
            <begin position="266"/>
            <end position="399"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ67286.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="451" mass="48848" checksum="CBCA3B2EE893D6DF" modified="2015-12-09" version="1">MARLRETIRYILRGGPPIDGLPDRVQAEIRAREAASERLIGWVQLALVLFFASLYLLAPRAEGSAGFNFVPIALGAYFLFTVTRLALSYRFELPEWFLLISICVDMALLVGLIFSFHIQYDQHPTFYLKTPTLMYVFLFIGLRALRFDPRFVLTTGMVAVVGWIGLVAYAIFSDMGGMRVTRNYVEYLTGNSILLGAELDKTMVILAVTVLLSAALYRGRSMLFEATRDHSAAMDLKRFFSPEVASSITEAHQALEAGEGSLRDAAILYADIRSFTSTSAVLPPETVLAVLAEYQNLAVEVITREGGQVDKFLGDGILATFGAVSPSETYAADALRAAQALVVAMTEAQDRFKTAGWPSDLRVGTAVAAGPVTVGVIGSKNRLEFTVIGDAVNRAAKLEDANKAQQSSALTDCMSLDLARSQGYSGDAVDIRPSSKVSGVSGPVDLAVLAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZ47</accession>
    <name>A0A0M6ZZ47_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01397</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67452.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671198.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67452">
        <property type="protein sequence ID" value="CTQ67452"/>
        <property type="gene ID" value="LAX5112_01397"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67452.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="96" mass="11207" checksum="AA5E40294BAAA00E" modified="2015-12-09" version="1">MIDQKDVRLDNFIVALKRLHLAQVQLANFQDRSKADIRQKRHTAAEYSISWLERLEQDLPKLQQELAVAFGELHPRLQADLEKIICEDTGLPHLQH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZU1</accession>
    <name>A0A0M6ZZU1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01198</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67064.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671038.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67064">
        <property type="protein sequence ID" value="CTQ67064"/>
        <property type="gene ID" value="LAX5112_01198"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67064.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="67" mass="7404" checksum="47BC3C0057A433DD" modified="2015-12-09" version="1">MTDKELGKTELPSGIEVEQDSIDQLFAMVIEMALGPEHADKTIDELTDEQKMTVVNVIAQISGEIEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A045</accession>
    <name>A0A0M7A045_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01253</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67183.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671088.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67183">
        <property type="protein sequence ID" value="CTQ67183"/>
        <property type="gene ID" value="LAX5112_01253"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67183.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="284" mass="31588" checksum="CCB02580FA7D659A" modified="2015-12-09" version="1">MTTAFAKEADLCSLFIKCLPRGWTAYPETGGFDILLSRDSDGFQIGVEAKLRLNAKVIQQAMEGRSWSRVAGPGPDCRAVLVPSDARGGMEPVCAALGITPIRMQSDLKLDQDGNPMFQLARQKEIRILAQCHTSVGTCWAYPFRPSLPANEHSGRDDWFERCPDRRLTLPDYVPDVSAGESAPVALTQWKIKAIKIVVTLERRGYLTRRDFKHFKISMSRWIEGFDPWLVKDGNGGWVSGSGLPDFRKQHPINFSQIETDYESWRGPEEASQPGLFAGKGAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0F5</accession>
    <name>A0A0M7A0F5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01617</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68051.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008190419.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01617"/>
    <dbReference type="EnsemblBacteria" id="CTQ68051">
        <property type="protein sequence ID" value="CTQ68051"/>
        <property type="gene ID" value="LAX5112_01617"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019201">
        <property type="entry name" value="DUF2065"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38602">
        <property type="entry name" value="PTHR38602"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09838">
        <property type="entry name" value="DUF2065"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="40"/>
            <end position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68051.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="61" mass="6365" checksum="E57E0D2C1AD8FD72" modified="2015-12-09" version="1">MNELLTAIGLVLVLEGVLYAIAPGGMKNVMRSALETPDQTLRAAGLGAAVIGVFLVWIIRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0I7</accession>
    <name>A0A0M7A0I7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01572</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67922.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671360.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01572"/>
    <dbReference type="EnsemblBacteria" id="CTQ67922">
        <property type="protein sequence ID" value="CTQ67922"/>
        <property type="gene ID" value="LAX5112_01572"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009506">
        <property type="entry name" value="DUF1127"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06568">
        <property type="entry name" value="DUF1127"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67922.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="75" mass="8745" checksum="679A1085BB524D2A" modified="2015-12-09" version="1">MSALESIFAPSCTNQPRVTFPRWNLVRLVLQWMAVARSRRELASLTDDQLKDIGLKRSEVLVEIEKPFWQGPDFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0M7</accession>
    <name>A0A0M7A0M7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Efflux pump membrane transporter BepE</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">bepE</name>
        <name evidence="2" type="ORF">LAX5112_01780</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68545.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671506.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01780"/>
    <dbReference type="EnsemblBacteria" id="CTQ68545">
        <property type="protein sequence ID" value="CTQ68545"/>
        <property type="gene ID" value="LAX5112_01780"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.2090.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027463">
        <property type="entry name" value="AcrB_DN_DC_subdom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001036">
        <property type="entry name" value="Acrflvin-R"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32063">
        <property type="entry name" value="PTHR32063"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00873">
        <property type="entry name" value="ACR_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00702">
        <property type="entry name" value="ACRIFLAVINRP"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82714">
        <property type="entry name" value="SSF82714"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="332"/>
            <end position="351"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="358"/>
            <end position="378"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="384"/>
            <end position="408"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="429"/>
            <end position="449"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="461"/>
            <end position="484"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="518"/>
            <end position="541"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="850"/>
            <end position="870"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="877"/>
            <end position="897"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="903"/>
            <end position="924"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="952"/>
            <end position="972"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="978"/>
            <end position="1006"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68545.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="1039" mass="110946" checksum="6F01002C63A2DC92" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0Q0</accession>
    <name>A0A0M7A0Q0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Exosortase A system-associated hydrolase 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01358</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67374.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671166.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01358"/>
    <dbReference type="EnsemblBacteria" id="CTQ67374">
        <property type="protein sequence ID" value="CTQ67374"/>
        <property type="gene ID" value="LAX5112_01358"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022742">
        <property type="entry name" value="Hydrolase_4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015946">
        <property type="entry name" value="KH_dom-like_a/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003718">
        <property type="entry name" value="OsmC/Ohr_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036102">
        <property type="entry name" value="OsmC/Ohrsf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12146">
        <property type="entry name" value="Hydrolase_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02566">
        <property type="entry name" value="OsmC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82784">
        <property type="entry name" value="SSF82784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Hydrolase_4" evidence="1">
        <location>
            <begin position="48"/>
            <end position="136"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67374.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="411" mass="43691" checksum="17B6E4100F85A836" modified="2015-12-09" version="1">MAQQAQKLEFEGSQGAHLAARLDLPAGPIRAFALFAHCFTCSKDIAAARHIAGALSAEGVAVLRFDFTGLGGSGGDFSSTGFSSNVEDLKVAADFLRKNYEAPQLLIGHSLGGAAVLSVAKDIPEVRAVVTIGAPSEAGHVVHNFAHAINDIKEQGALEVDLAGRPFTIRREFLADLERQAVLSHTAELGKALLVMHAPLDETVGIDNASEIFLAAKHPKSFVSLDKADHLLSRSQDAEYAAKVIAGWSSGYLDPIVEPDASAKGDGVEVVETGQGKFQALVASGHHRLIADEPESYGGFDSGPSPYGYLSAALGACTVMTLRMYADRKGLDIDRIGTTVLHDKVHAAECEDCSEEQKTRGGKIDRFERLITLEGDLDAATRTRLLEIADKCPVHRTLESGAAVVTREVDV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A196</accession>
    <name>A0A0M7A196_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 6 8">30S ribosomal protein S12</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6 10" type="primary">rpsL</name>
        <name evidence="10" type="ORF">LAX5112_01721</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5 6 8">Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.</text>
    </comment>
    <comment type="function">
        <text evidence="1 6 8">With S4 and S5 plays an important role in translational accuracy.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6 8">Part of the 30S ribosomal subunit. Contacts proteins S8 and S17. May interact with IF1 in the 30S initiation complex.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 6 7">Belongs to the universal ribosomal protein uS12 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68387.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_006936459.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01721"/>
    <dbReference type="EnsemblBacteria" id="CTQ68387">
        <property type="protein sequence ID" value="CTQ68387"/>
        <property type="gene ID" value="LAX5112_01721"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015935">
        <property type="term" value="C:small ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd03368">
        <property type="entry name" value="Ribosomal_S12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00403_B">
        <property type="entry name" value="Ribosomal_S12_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006032">
        <property type="entry name" value="Ribosomal_S12/S23"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005679">
        <property type="entry name" value="Ribosomal_S12_bac"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11652">
        <property type="entry name" value="PTHR11652"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00164">
        <property type="entry name" value="Ribosom_S12_S23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002133">
        <property type="entry name" value="Ribosomal_S12/S23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01034">
        <property type="entry name" value="RIBOSOMALS12"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00981">
        <property type="entry name" value="rpsL_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00055">
        <property type="entry name" value="RIBOSOMAL_S12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0488">Methylation</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 7" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="6 7" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="6 8" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="6 8" id="KW-0699">rRNA-binding</keyword>
    <keyword evidence="6 8" id="KW-0820">tRNA-binding</keyword>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003022"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005657"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00015690"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022481"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00024962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00403"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003622"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU003623"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ68387.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="123" mass="13977" checksum="AA5C2ADE3D052C2F" modified="2015-12-09" version="1">MPTINQLIRKPRKDPPKRNKVPAMEACPQKRGVCTRVYTTTPKKPNSALRKVAKIRLTNGFEVIGYIPGEGHNLQEHSVVMIRGGRVKDLPGVRYHIIRGVLDTQGVKDRKQRRSKYGAKRPK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1K2</accession>
    <name>A0A0M7A1K2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glutathione S-transferase YfcF</fullName>
            <ecNumber evidence="2">2.5.1.18</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yfcF</name>
        <name evidence="2" type="ORF">LAX5112_01945</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.5.1.18" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68948.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671631.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01945"/>
    <dbReference type="EnsemblBacteria" id="CTQ68948">
        <property type="protein sequence ID" value="CTQ68948"/>
        <property type="gene ID" value="LAX5112_01945"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004364">
        <property type="term" value="F:glutathione transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006749">
        <property type="term" value="P:glutathione metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036282">
        <property type="entry name" value="Glutathione-S-Trfase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040079">
        <property type="entry name" value="Glutathione_S-Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004045">
        <property type="entry name" value="Glutathione_S-Trfase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13409">
        <property type="entry name" value="GST_N_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00019">
        <property type="entry name" value="Glutathione_Transferase_(cytos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47616">
        <property type="entry name" value="SSF47616"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50404">
        <property type="entry name" value="GST_NTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="GST N-terminal" evidence="1">
        <location>
            <begin position="4"/>
            <end position="84"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50404"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68948.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="215" mass="24309" checksum="2819EDAF19F36E6D" modified="2015-12-09" version="1">MAEFELFIGNKNYSTWSFRPWIAMRHKGIAFKETLVPFDFENGNPKFRDFSPSMKVPVLKHGDLTVWDSLAILEYVADCEPETGLWPADPRKRARARSISAEMHSGFPALRAECPMNMRRSAEQRSVSEAVKADVARILQIWDECLETSGGPFLFGDFTIADAMYAPVVSRFDTYGLNDASVAARYSQTLRGLDAWQAWEADALKETWVVAVDEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1L0</accession>
    <name>A0A0M7A1L0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 11">DNA-directed RNA polymerase subunit alpha</fullName>
            <shortName evidence="11">RNAP subunit alpha</shortName>
            <ecNumber evidence="2 11">2.7.7.6</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10 11">RNA polymerase subunit alpha</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="9 11">Transcriptase subunit alpha</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11 13" type="primary">rpoA</name>
        <name evidence="13" type="ORF">LAX5112_01750</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11">DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8 11">
            <text>a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate + RNA(n+1)</text>
            <dbReference type="Rhea" id="RHEA:21248"/>
            <dbReference type="Rhea" id="RHEA-COMP:14527"/>
            <dbReference type="Rhea" id="RHEA-COMP:17342"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:61557"/>
            <dbReference type="ChEBI" id="CHEBI:140395"/>
            <dbReference type="EC" id="2.7.7.6"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="11">Homodimer. The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription.</text>
    </comment>
    <comment type="domain">
        <text evidence="11">The N-terminal domain is essential for RNAP assembly and basal transcription, whereas the C-terminal domain is involved in interaction with transcriptional regulators and with upstream promoter elements.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 11">Belongs to the RNA polymerase alpha chain family.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.6" evidence="2 11"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68467.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008190287.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01750"/>
    <dbReference type="EnsemblBacteria" id="CTQ68467">
        <property type="protein sequence ID" value="CTQ68467"/>
        <property type="gene ID" value="LAX5112_01750"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000428">
        <property type="term" value="C:DNA-directed RNA polymerase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003899">
        <property type="term" value="F:DNA-directed 5'-3' RNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046983">
        <property type="term" value="F:protein dimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006351">
        <property type="term" value="P:transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.170.120.12">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1360.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00059">
        <property type="entry name" value="RNApol_bact_RpoA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011262">
        <property type="entry name" value="DNA-dir_RNA_pol_insert"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011263">
        <property type="entry name" value="DNA-dir_RNA_pol_RpoA/D/Rpb3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011773">
        <property type="entry name" value="DNA-dir_RpoA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036603">
        <property type="entry name" value="RBP11-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011260">
        <property type="entry name" value="RNAP_asu_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036643">
        <property type="entry name" value="RNApol_insert_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32108">
        <property type="entry name" value="PTHR32108"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01000">
        <property type="entry name" value="RNA_pol_A_bac"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03118">
        <property type="entry name" value="RNA_pol_A_CTD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01193">
        <property type="entry name" value="RNA_pol_L"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00662">
        <property type="entry name" value="RPOLD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55257">
        <property type="entry name" value="SSF55257"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56553">
        <property type="entry name" value="SSF56553"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02027">
        <property type="entry name" value="rpoA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 11 13" id="KW-0240">DNA-directed RNA polymerase</keyword>
    <keyword evidence="6 11 13" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 11" id="KW-0804">Transcription</keyword>
    <keyword evidence="5 11 13" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="RPOLD" evidence="12">
        <location>
            <begin position="27"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="region of interest" description="Alpha N-terminal domain (alpha-NTD)" evidence="11">
        <location>
            <begin position="1"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="region of interest" description="Alpha C-terminal domain (alpha-CTD)" evidence="11">
        <location>
            <begin position="251"/>
            <end position="340"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00015972"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00024550"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00032524"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00033070"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00059"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="SMART" id="SM00662"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="CTQ68467.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="340" mass="37774" checksum="DB72C700BB4BC346" modified="2015-12-09" version="1">MTIQKNWQELIKPTKLEIKPGDDPRFLATVVAEPLERGYGLTLGNALRRILLSSLQGAAVTAVQIDGVLHEFSSIPGVREDVTDIVLNIKEIAIRMEGEGPKRMVVRKQGPGVVTAGDIQTVGDVEVLNPDLVLCTLDEGAEIRMEFTVNTGKGYHSSDRNRPEDAPIGLIPVDSLYSPVKKVSYKVENTREGQVLDYDKLTLTVETDGSVKPDDAVAFAARILQDQLSIFVNFEEPQREVAEDTVPELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKSLNEIKEVLAQMGLHLGMEVANWPPENIDDLAKRYEDHQY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1L5</accession>
    <name>A0A0M7A1L5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Cupin domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01661</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68170.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671427.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ68170">
        <property type="protein sequence ID" value="CTQ68170"/>
        <property type="gene ID" value="LAX5112_01661"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013096">
        <property type="entry name" value="Cupin_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07883">
        <property type="entry name" value="Cupin_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cupin_2" evidence="1">
        <location>
            <begin position="46"/>
            <end position="90"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68170.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="112" mass="12329" checksum="118F109E04F7FCD1" modified="2015-12-09" version="1">MDLPDFIKSFPALDVPFPEDVVSSHAVQSDRGLVVFFDFKKDMALPPHSHLAQWGTVLSGEIEFTIGGKTRTMGPGAIYNIPANVEHGAVIKAGTKVIDVFEEPYRYPLRGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1Q4</accession>
    <name>A0A0M7A1Q4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Membrane-bound lytic murein transglycosylase B</fullName>
            <ecNumber evidence="4">4.2.2.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">mltB_2</name>
        <name evidence="4" type="ORF">LAX5112_01876</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="4.2.2.-" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68759.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671576.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01876"/>
    <dbReference type="EnsemblBacteria" id="CTQ68759">
        <property type="protein sequence ID" value="CTQ68759"/>
        <property type="gene ID" value="LAX5112_01876"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.101.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023346">
        <property type="entry name" value="Lysozyme-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043426">
        <property type="entry name" value="MltB-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011970">
        <property type="entry name" value="MltB_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002477">
        <property type="entry name" value="Peptidoglycan-bd-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036365">
        <property type="entry name" value="PGBD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036366">
        <property type="entry name" value="PGBDSf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031304">
        <property type="entry name" value="SLT_2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30163">
        <property type="entry name" value="PTHR30163"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01471">
        <property type="entry name" value="PG_binding_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13406">
        <property type="entry name" value="SLT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47090">
        <property type="entry name" value="SSF47090"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53955">
        <property type="entry name" value="SSF53955"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02283">
        <property type="entry name" value="MltB_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0456">Lyase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809398" evidence="1">
        <location>
            <begin position="29"/>
            <end position="398"/>
        </location>
    </feature>
    <feature type="domain" description="SLT_2" evidence="3">
        <location>
            <begin position="35"/>
            <end position="323"/>
        </location>
    </feature>
    <feature type="domain" description="PG_binding_1" evidence="2">
        <location>
            <begin position="343"/>
            <end position="398"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF13406"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ68759.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="398" mass="42858" checksum="580BD847A2845B95" modified="2015-12-09" version="1">MTRHPFPLKTFAVAALTGLALMTAPAVAQQCGGDFQTFLAGVKQEAVAKGLSASAVDQTLSSAQIDRKVLSRDRAQGVFKMTFLDFSKRVISSYRMKNGAANMVKYASVFDRVESEYGVPAPVITAFWALETDFGAVQGDFNTVNALATLAHDCRRPELFRPQLIAAIEMVQHGDLDPQNTTGAWAGEIGMVQMLPEDIIKFGKDADGDGHVRLKASAPDAILTAGAFIGHLGWQPGEPWLQEVTVPQSLNWAETGLGKTKSGSDWAALGVQPRWGQISGNLPASLLLPQGRKGPAFLAYPNYNIYLEWNQSFIYTTSAAYFATRLAGAPRYDAGNPDQGLNDAQMKQLQTKLSALGYDVGKIDGILGAGTRNAVQQVQQQLGMPADAWPTPALLNKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2F7</accession>
    <name>A0A0M7A2F7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="11">D-alanyl-D-alanine carboxypeptidase DacC</fullName>
            <ecNumber evidence="11">3.4.16.4</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">dacC_2</name>
        <name evidence="11" type="ORF">LAX5112_01831</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 8">Belongs to the peptidase S11 family.</text>
    </comment>
    <dbReference type="EC" id="3.4.16.4" evidence="11"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68662.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01831"/>
    <dbReference type="EnsemblBacteria" id="CTQ68662">
        <property type="protein sequence ID" value="CTQ68662"/>
        <property type="gene ID" value="LAX5112_01831"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042834">
        <property type="term" value="F:peptidoglycan binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009002">
        <property type="term" value="F:serine-type D-Ala-D-Ala carboxypeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008360">
        <property type="term" value="P:regulation of cell shape"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1070">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.710.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012338">
        <property type="entry name" value="Beta-lactam/transpept-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018044">
        <property type="entry name" value="Peptidase_S11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001967">
        <property type="entry name" value="Peptidase_S11_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007730">
        <property type="entry name" value="SPOR-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036680">
        <property type="entry name" value="SPOR-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00768">
        <property type="entry name" value="Peptidase_S11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05036">
        <property type="entry name" value="SPOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00725">
        <property type="entry name" value="DADACBPTASE1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF110997">
        <property type="entry name" value="SSF110997"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56601">
        <property type="entry name" value="SSF56601"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51724">
        <property type="entry name" value="SPOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11" id="KW-0121">Carboxypeptidase</keyword>
    <keyword evidence="3" id="KW-0133">Cell shape</keyword>
    <keyword evidence="5" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="11" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0573">Peptidoglycan synthesis</keyword>
    <keyword evidence="11" id="KW-0645">Protease</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 9" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="9">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809193" evidence="9">
        <location>
            <begin position="25"/>
            <end position="558"/>
        </location>
    </feature>
    <feature type="domain" description="SPOR" evidence="10">
        <location>
            <begin position="474"/>
            <end position="558"/>
        </location>
    </feature>
    <feature type="active site" description="Acyl-ester intermediate" evidence="6">
        <location>
            <position position="54"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="6">
        <location>
            <position position="57"/>
        </location>
    </feature>
    <feature type="active site" evidence="6">
        <location>
            <position position="114"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="216"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007164"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR618044-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR618044-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU004016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51724"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ68662.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="558" mass="58947" checksum="A13E5004D1B327BF" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2L1</accession>
    <name>A0A0M7A2L1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Glycosyl transferase family 8</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01778</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68540.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671504.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01778"/>
    <dbReference type="EnsemblBacteria" id="CTQ68540">
        <property type="protein sequence ID" value="CTQ68540"/>
        <property type="gene ID" value="LAX5112_01778"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016757">
        <property type="term" value="F:glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002495">
        <property type="entry name" value="Glyco_trans_8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01501">
        <property type="entry name" value="Glyco_transf_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ68540.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="284" mass="32594" checksum="04E39BC58CD9D837" modified="2015-12-09" version="1">MASDFPVFETAATSPHAYVTLVTNADYVLGATALLRSLRLSGTKADLVVLFTPGVAPEDLEVLRVFAPRLGQCDRLPTSEAFNERHERGRLHKAAPFTKGGKPVFHTPLDNFVKLRLWQLEDYDSVVFIDADALVLKNCDKLFAYPEFCAAPNVYEALGDFRRMNSGVFTARPNADTYADMLKQLDAPEAFWRRTDQTFLEGYFPDWHGLPVFYNMLQYVWFNLPDLWDWNQIHILHYQYEKPWQTGHARSDLLRPLIDLWQAFHEGRNVGDMLASLPWPPAQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A343</accession>
    <name>A0A0M7A343_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01648</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68134.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671414.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01648"/>
    <dbReference type="EnsemblBacteria" id="CTQ68134">
        <property type="protein sequence ID" value="CTQ68134"/>
        <property type="gene ID" value="LAX5112_01648"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045964">
        <property type="entry name" value="DUF6384"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19911">
        <property type="entry name" value="DUF6384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="100"/>
            <end position="118"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68134.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="308" mass="34239" checksum="6F7C7EB2546EE062" modified="2015-12-09" version="1">MAAQPDTPLDDLMMAMDVVDTLRHEEGQVARELKTDERDAAMVERLRNVYAAQGIDVPDHILKAGVEDLKRDRFVYSPPAAGFQRTLAMVYITRSIWSKWLAGLAAVLIVATTAWYMLVTLPAQRSEAALAERLENMPQTYSELFQRIDDLTGNSAIEADAQRLVDNGTIALSDGKTNVAFKAEADLRDLASRLAEVFDVQIISREGVPTGITRIPDANQDAENHYIVVEAVDPDGNILERDIVSEENGETVRVNKWAQRVSDTIYTAVRRDKVDDGIVQKGTLGQKQRGELDITWRSGVQNGAITEW</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3H6</accession>
    <name>A0A0M7A3H6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">YceI domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01981</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ69032.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671653.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01981"/>
    <dbReference type="EnsemblBacteria" id="CTQ69032">
        <property type="protein sequence ID" value="CTQ69032"/>
        <property type="gene ID" value="LAX5112_01981"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.128.110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007372">
        <property type="entry name" value="Lipid/polyisoprenoid-bd_YceI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036761">
        <property type="entry name" value="TTHA0802/YceI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04264">
        <property type="entry name" value="YceI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00867">
        <property type="entry name" value="YceI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101874">
        <property type="entry name" value="SSF101874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809072" description="YceI domain-containing protein" evidence="1">
        <location>
            <begin position="24"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="domain" description="YceI" evidence="2">
        <location>
            <begin position="25"/>
            <end position="183"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00867"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ69032.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="184" mass="19061" checksum="82C38BD6D23EB6F5" modified="2015-12-09" version="1">MTLKSLALLSCTLSFLTVQPALAATWTVDPALSTLGFEVQQGSSALTGRFTSWDASIEFDPDAPENADISATIRPASASTGNAQFDGTLPNGDWFDTAAFPDATFTADNVERVEGDSYRANGTLTIKGVSMPLALDFTLAINGDTATANGVATLNRIEYGLGSGVGTDTVGDAVTVTLNLTATR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A413</accession>
    <name>A0A0M7A413_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 5">50S ribosomal protein L4</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 7" type="primary">rplD</name>
        <name evidence="7" type="ORF">LAX5112_01727</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Forms part of the polypeptide exit tunnel.</text>
    </comment>
    <comment type="function">
        <text evidence="5">One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Part of the 50S ribosomal subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the universal ribosomal protein uL4 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68404.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671480.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01727"/>
    <dbReference type="EnsemblBacteria" id="CTQ68404">
        <property type="protein sequence ID" value="CTQ68404"/>
        <property type="gene ID" value="LAX5112_01727"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1370.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01328_B">
        <property type="entry name" value="Ribosomal_L4_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002136">
        <property type="entry name" value="Ribosomal_L4/L1e"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023574">
        <property type="entry name" value="Ribosomal_L4_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013005">
        <property type="entry name" value="Ribosomal_uL4/L1e"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10746">
        <property type="entry name" value="PTHR10746"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00573">
        <property type="entry name" value="Ribosomal_L4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52166">
        <property type="entry name" value="SSF52166"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03953">
        <property type="entry name" value="rplD_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3 5" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="5" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="5" id="KW-0699">rRNA-binding</keyword>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="63"/>
            <end position="94"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010528"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00019302"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01328"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ68404.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="206" mass="22135" checksum="4660BAE991AC1434" modified="2015-12-09" version="1">MELQVKTLEGGAAGSITVSDEIFGLEPRTDLIHRVVRWQLAKRQAGTHKTLGRSEVTGSTKKFVRQKGSGGARHGNKKAPQFRGGGRAFGPVVRDHGHDLPKKVRVLGLKHALSAKARADSIVVVEDAKAAEAKTKALKSQLNKLGLTSALVIDGAEVDNNFALASRNIPHLDVLPVQGINVYDILRANTLVLTKAAVSALEERFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4W6</accession>
    <name>A0A0M7A4W6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Polyhydroxyalkanoate synthesis repressor PhaR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_02062</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69300.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671910.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02062"/>
    <dbReference type="EnsemblBacteria" id="CTQ69300">
        <property type="protein sequence ID" value="CTQ69300"/>
        <property type="gene ID" value="LAX5112_02062"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012909">
        <property type="entry name" value="PHA_DNA-bd_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010134">
        <property type="entry name" value="PHA_reg_PhaR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007897">
        <property type="entry name" value="PHB_accumulat"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05233">
        <property type="entry name" value="PHB_acc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07879">
        <property type="entry name" value="PHB_acc_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01848">
        <property type="entry name" value="PHA_reg_PhaR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PHB_acc_N" evidence="3">
        <location>
            <begin position="9"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="domain" description="PHB_acc" evidence="2">
        <location>
            <begin position="73"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="153"/>
            <end position="175"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF05233"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF07879"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ69300.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="194" mass="21729" checksum="889DBF1C408F7D72" modified="2015-12-09" version="1">MAKTSEPTIIKKYANRRLYNTGTSTYVTLEDLAVMVKGEEDFVVYDAKSGDDITRSVLTQIIFEQEAKGTNLLPVSFLRQLIGFYGDSMQGLVPSYLEYSMTSLTKEQEKLRAQMTDAFGATAFDAIEDQVKRNTEMFERAMKMFMPFPTGEGAAAVAPGSEKKTAQPEASDLDDMKRQLEEMQKTISKLTDKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5Z5</accession>
    <name>A0A0M7A5Z5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02534</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the AHA1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70508.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672107.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02534"/>
    <dbReference type="EnsemblBacteria" id="CTQ70508">
        <property type="protein sequence ID" value="CTQ70508"/>
        <property type="gene ID" value="LAX5112_02534"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.530.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013538">
        <property type="entry name" value="Activator_of_Hsp90_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023393">
        <property type="entry name" value="START-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08327">
        <property type="entry name" value="AHSA1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006817"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70508.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="173" mass="19334" checksum="CDF9389C2DA11C33" modified="2015-12-09" version="1">MKQDVENNAAMTSQAASEFECRFESVIPLARLDAFKLVVDHPELWWCPPLSEAPSGGLDVRIEPFAGGACYQIDDKGQRCIWGTVLSIEEPLYIRISWQVAQDGSLIADPAAASRVMLNFREAGEVTRVEVVHNKFLRHGEAGGEYMQLMMQSSGWPRILKNLVEAAKTLKRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A613</accession>
    <name>A0A0M7A613_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Citrate synthase (unknown stereospecificity)</fullName>
            <ecNumber evidence="2">2.3.3.16</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">citZ</name>
        <name evidence="5" type="ORF">LAX5112_02010</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Carbohydrate metabolism; tricarboxylic acid cycle; isocitrate from oxaloacetate: step 1/2.</text>
    </comment>
    <dbReference type="EC" id="2.3.3.16" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69173.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02010"/>
    <dbReference type="EnsemblBacteria" id="CTQ69173">
        <property type="protein sequence ID" value="CTQ69173"/>
        <property type="gene ID" value="LAX5112_02010"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00223">
        <property type="reaction ID" value="UER00717"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004108">
        <property type="term" value="F:citrate (Si)-synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006099">
        <property type="term" value="P:tricarboxylic acid cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.580.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016142">
        <property type="entry name" value="Citrate_synth-like_lrg_a-sub"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016143">
        <property type="entry name" value="Citrate_synth-like_sm_a-sub"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002020">
        <property type="entry name" value="Citrate_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036969">
        <property type="entry name" value="Citrate_synthase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041657">
        <property type="entry name" value="HTH_17"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000551">
        <property type="entry name" value="MerR-type_HTH_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11739">
        <property type="entry name" value="PTHR11739"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00285">
        <property type="entry name" value="Citrate_synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12728">
        <property type="entry name" value="HTH_17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00143">
        <property type="entry name" value="CITRTSNTHASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM00422">
        <property type="entry name" value="HTH_MERR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48256">
        <property type="entry name" value="SSF48256"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50937">
        <property type="entry name" value="HTH_MERR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="3" id="KW-0816">Tricarboxylic acid cycle</keyword>
    <feature type="domain" description="HTH merR-type" evidence="4">
        <location>
            <begin position="16"/>
            <end position="63"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004751"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012972"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022532"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50937"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ69173.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="399" mass="43251" checksum="D7DEBF7ECA3B3C44" modified="2015-12-09" version="1">MINLDKYNQYMNTPIYLSAKEAAAELGVQPATLYAYVSRGLIESVAGPGKQRRYDAADVRRLKGRRTTEEVSGSRPLTGDPVLETELTMITKEGAIYRGRPAVDLAENATLESVATLLWDCDDDPFAEPAPFAPPELPDGLGPLDRVMMALAAWPLQDRAAHTQAVKLLRTKGAALLRYGVAALLETEPQTIPVHTQIAQAFDVSSRAKNLIRAALVLSADHELNTSTFAARCAASTRAPLHAALLSGLGAFTGPRHGAASGRANAWMAEIDADSDVEALIADRLGRGETLPGFGHKIYVDKDPRCHWLITNLMVSEPDHPFVRKLPAILKSGSDLFGLFPNIDFALAAIQKTYDLPKDSGKIIFCAGRMAGWIAHALEQYGGQEQIRPRATYVGIRDS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6D7</accession>
    <name>A0A0M7A6D7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Bacterial extracellular solute-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_02561</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the bacterial solute-binding protein 1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70648.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672160.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02561"/>
    <dbReference type="EnsemblBacteria" id="CTQ70648">
        <property type="protein sequence ID" value="CTQ70648"/>
        <property type="gene ID" value="LAX5112_02561"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014597">
        <property type="entry name" value="ABC_tp_sb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006059">
        <property type="entry name" value="SBP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01547">
        <property type="entry name" value="SBP_bac_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF035859">
        <property type="entry name" value="ABC_tp_sb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0574">Periplasm</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="6">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809296" evidence="6">
        <location>
            <begin position="24"/>
            <end position="578"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008520"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ70648.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="578" mass="64512" checksum="461354C5DBB201E9" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6K2</accession>
    <name>A0A0M7A6K2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative transcription regulator, contains HTH domain (MarR family)</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02583</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70708.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672170.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02583"/>
    <dbReference type="EnsemblBacteria" id="CTQ70708">
        <property type="protein sequence ID" value="CTQ70708"/>
        <property type="gene ID" value="LAX5112_02583"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000835">
        <property type="entry name" value="HTH_MarR-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014601">
        <property type="entry name" value="Trans_reg_MarR_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13463">
        <property type="entry name" value="HTH_27"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF036158">
        <property type="entry name" value="UCP036158_MarR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00347">
        <property type="entry name" value="HTH_MARR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH marR-type" evidence="1">
        <location>
            <begin position="53"/>
            <end position="152"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00347"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70708.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="178" mass="19191" checksum="6DD5B6A866E8377C" modified="2015-12-09" version="1">MTERPKPNSDAQIGPVVSAAHLASGAMPALSEIEFAVTMMVNAYHRWMGRCMAASGSEGLGPLDVLVLHSVNHRGRAKTLSDICLVLNIEDTHTVTYALKKLEKAGLITSGRRGKEKTAEITPEGETACMEYRRLREALLVEPMKALGLDESELSRLAATLRLVSGNYDQAARAAAAM</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A715</accession>
    <name>A0A0M7A715_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">CENP-V/GFA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_02145</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the Gfa family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69523.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671800.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02145"/>
    <dbReference type="EnsemblBacteria" id="CTQ69523">
        <property type="protein sequence ID" value="CTQ69523"/>
        <property type="gene ID" value="LAX5112_02145"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016846">
        <property type="term" value="F:carbon-sulfur lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006913">
        <property type="entry name" value="CENP-V/GFA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011057">
        <property type="entry name" value="Mss4-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04828">
        <property type="entry name" value="GFA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51316">
        <property type="entry name" value="SSF51316"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51891">
        <property type="entry name" value="CENP_V_GFA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CENP-V/GFA" evidence="3">
        <location>
            <begin position="4"/>
            <end position="132"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005495"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51891"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ69523.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="144" mass="15521" checksum="F15E5454A9B47DE1" modified="2015-12-09" version="1">MPEFKGGCLCGAIQYEVTGKPVNMWNCHCTDCQKSSGASYATNVFVKVPDLTITKGEPDKFQHQADSGNTMTKEYCSNCGSQLFNGNSGRPAIKVIRAGTIDDPSFVVPRANIYASRALPAAIEGTEIPTFDEMPPDPSVFFSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7A8</accession>
    <name>A0A0M7A7A8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">UPF0301 protein LAX5112_02367</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02367</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the UPF0301 (AlgH) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70120.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671986.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02367"/>
    <dbReference type="EnsemblBacteria" id="CTQ70120">
        <property type="protein sequence ID" value="CTQ70120"/>
        <property type="gene ID" value="LAX5112_02367"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00758">
        <property type="entry name" value="UPF0301"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003774">
        <property type="entry name" value="UPF0301"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30327">
        <property type="entry name" value="PTHR30327"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02622">
        <property type="entry name" value="DUF179"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009600"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00758"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ70120.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="198" mass="21359" checksum="F63F43B24B7862CA" modified="2015-12-09" version="1">MSEIGAADTLEGQFLIAMPSMADSRFEHSVIYVCSHSEQGAMGLIVNQVAKHLSLEELLIQLDIVNDDDAIRLPPQVRGMSVHKGGPVEVERGFVLHSDDFQLNQSTLAIDNGICLTATLEILRALAEGTGPRLAMLALGYAGWAPGQLENEIQSNGWLTAPADRDILFDANSEKKWHRALGSLGIDPAMLFSDAGHA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7I3</accession>
    <name>A0A0M7A7I3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Virulence factor Mce family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02722</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71115.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672273.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02722"/>
    <dbReference type="EnsemblBacteria" id="CTQ71115">
        <property type="protein sequence ID" value="CTQ71115"/>
        <property type="gene ID" value="LAX5112_02722"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003399">
        <property type="entry name" value="Mce/MlaD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02470">
        <property type="entry name" value="MlaD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="domain" description="MlaD" evidence="2">
        <location>
            <begin position="38"/>
            <end position="115"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02470"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ71115.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="667" mass="70495" checksum="9DF30288D9CBAA13" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7I4</accession>
    <name>A0A0M7A7I4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Putative copper export protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">LAX5112_02213</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69693.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671850.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02213"/>
    <dbReference type="EnsemblBacteria" id="CTQ69693">
        <property type="protein sequence ID" value="CTQ69693"/>
        <property type="gene ID" value="LAX5112_02213"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006825">
        <property type="term" value="P:copper ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032694">
        <property type="entry name" value="CopC/D"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008457">
        <property type="entry name" value="Cu-R_CopD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34820">
        <property type="entry name" value="PTHR34820"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05425">
        <property type="entry name" value="CopD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="12"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="49"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="89"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="121"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="151"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="195"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="228"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="269"/>
            <end position="290"/>
        </location>
    </feature>
    <feature type="domain" description="CopD" evidence="7">
        <location>
            <begin position="187"/>
            <end position="285"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF05425"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ69693.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="293" mass="30679" checksum="3DD483727EAEDD91" modified="2015-12-09" version="1">MLAVLAAMDAQILTSIAVKTLASATTLLAAGSVLVSVVLRSLTEDDRRYLARVAGFMALIAAVATLLRIPLRASFLMGGTLNGAFDPMLLGLIADSPLGGSVLVRLVGLALILGIFFKSRFGFAVALGGALVACLSFAFRGHTLEEPRLLLGTLITLHMICLAFWLGVFGPLLRSANRNASETTGEIAEEFGKKALWSVGLLVIAGGTLLVLFGVTTAQAVTAPYGQLFLMKLALFAAVIAFAALNKLRITPALLAGDPQAMPRLKTSIRLEAVLVISIFLVTATVTTITSPN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7P1</accession>
    <name>A0A0M7A7P1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Flagellar hook-associated protein 1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">LAX5112_02744</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Bacterial flagellum basal body</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Secreted</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the flagella basal body rod proteins family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71175.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672293.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02744"/>
    <dbReference type="EnsemblBacteria" id="CTQ71175">
        <property type="protein sequence ID" value="CTQ71175"/>
        <property type="gene ID" value="LAX5112_02744"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009425">
        <property type="term" value="C:bacterial-type flagellum basal body"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009424">
        <property type="term" value="C:bacterial-type flagellum hook"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005198">
        <property type="term" value="F:structural molecule activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044780">
        <property type="term" value="P:bacterial-type flagellum assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001444">
        <property type="entry name" value="Flag_bb_rod_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019776">
        <property type="entry name" value="Flagellar_basal_body_rod_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010930">
        <property type="entry name" value="Flg_bb/hook_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002371">
        <property type="entry name" value="FlgK"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30033">
        <property type="entry name" value="PTHR30033"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00460">
        <property type="entry name" value="Flg_bb_rod"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06429">
        <property type="entry name" value="Flg_bbr_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02492">
        <property type="entry name" value="flgK_ends"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00588">
        <property type="entry name" value="FLAGELLA_BB_ROD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0975">Bacterial flagellum</keyword>
    <keyword evidence="10" id="KW-0966">Cell projection</keyword>
    <keyword evidence="10" id="KW-0969">Cilium</keyword>
    <keyword evidence="7" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="10" id="KW-0282">Flagellum</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0964">Secreted</keyword>
    <feature type="domain" description="Flg_bb_rod" evidence="8">
        <location>
            <begin position="7"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="domain" description="Flg_bbr_C" evidence="9">
        <location>
            <begin position="577"/>
            <end position="628"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="7">
        <location>
            <begin position="137"/>
            <end position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009677"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00016244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023143"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00460"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF06429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ71175.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="631" mass="66302" checksum="EE7DE7EB73500D33" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7T7</accession>
    <name>A0A0M7A7T7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Putative membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_02456</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the UPF0114 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70300.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672053.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70300">
        <property type="protein sequence ID" value="CTQ70300"/>
        <property type="gene ID" value="LAX5112_02456"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005134">
        <property type="entry name" value="UPF0114"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020761">
        <property type="entry name" value="UPF0114_bac"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38596">
        <property type="entry name" value="PTHR38596"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03350">
        <property type="entry name" value="UPF0114"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="21"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="63"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="114"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="137"/>
            <end position="161"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005774"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ70300.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="166" mass="19052" checksum="C7F2E234E369D86C" modified="2015-12-09" version="1">MSDRADDTEKEMDVVTRLTRWAQIPLLIGLAIGMMLFLVTFFVDILDAVRTFEFMDRKKTILLILNLLDMVFIANLVIMVATNTYNSYRIRASAHGEDYIQQGQMAYRRMKHRIVSTIIIISSIHVLSELLEYSQATALQVAALFGFHLILLATYVVTNVFESNER</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A866</accession>
    <name>A0A0M7A866_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02263</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69814.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02263"/>
    <dbReference type="EnsemblBacteria" id="CTQ69814">
        <property type="protein sequence ID" value="CTQ69814"/>
        <property type="gene ID" value="LAX5112_02263"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ69814.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="47" mass="5234" checksum="107500ABA05DAA62" modified="2015-12-09" version="1">MPTLTRLLIVLLILGALGYGAVYSLATFVEPREREITVRVKKDGFGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8V8</accession>
    <name>A0A0M7A8V8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="10 11">DNA ligase</fullName>
            <ecNumber evidence="10 11">6.5.1.2</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10">Polydeoxyribonucleotide synthase [NAD(+)]</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="10 13" type="primary">ligA</name>
        <name evidence="13" type="ORF">LAX5112_02625</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="10">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <cofactor evidence="10">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="10">Belongs to the NAD-dependent DNA ligase family. LigA subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="6.5.1.2" evidence="10 11"/>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70836.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672203.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02625"/>
    <dbReference type="EnsemblBacteria" id="CTQ70836">
        <property type="protein sequence ID" value="CTQ70836"/>
        <property type="gene ID" value="LAX5112_02625"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003911">
        <property type="term" value="F:DNA ligase (NAD+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00114">
        <property type="entry name" value="LIGANc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10190">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01588">
        <property type="entry name" value="DNA_ligase_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001357">
        <property type="entry name" value="BRCT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036420">
        <property type="entry name" value="BRCT_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041663">
        <property type="entry name" value="DisA/LigA_HHH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018239">
        <property type="entry name" value="DNA_ligase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033136">
        <property type="entry name" value="DNA_ligase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001679">
        <property type="entry name" value="DNAligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013839">
        <property type="entry name" value="DNAligase_adenylation"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013840">
        <property type="entry name" value="DNAligase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004150">
        <property type="entry name" value="NAD_DNA_ligase_OB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010994">
        <property type="entry name" value="RuvA_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004149">
        <property type="entry name" value="Znf_DNAligase_C4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00533">
        <property type="entry name" value="BRCT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01653">
        <property type="entry name" value="DNA_ligase_aden"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03120">
        <property type="entry name" value="DNA_ligase_OB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03119">
        <property type="entry name" value="DNA_ligase_ZBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12826">
        <property type="entry name" value="HHH_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001604">
        <property type="entry name" value="LigA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00292">
        <property type="entry name" value="BRCT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00532">
        <property type="entry name" value="LIGANc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47781">
        <property type="entry name" value="SSF47781"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52113">
        <property type="entry name" value="SSF52113"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00575">
        <property type="entry name" value="dnlj"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50172">
        <property type="entry name" value="BRCT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01055">
        <property type="entry name" value="DNA_LIGASE_N1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01056">
        <property type="entry name" value="DNA_LIGASE_N2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 10 11" id="KW-0227">DNA damage</keyword>
    <keyword evidence="8 10 11" id="KW-0234">DNA repair</keyword>
    <keyword evidence="2 10 11" id="KW-0235">DNA replication</keyword>
    <keyword evidence="1 10 11" id="KW-0436">Ligase</keyword>
    <keyword evidence="6 10" id="KW-0460">Magnesium</keyword>
    <keyword evidence="9 10" id="KW-0464">Manganese</keyword>
    <keyword evidence="3 10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7 10 11" id="KW-0520">NAD</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 10" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="BRCT" evidence="12">
        <location>
            <begin position="644"/>
            <end position="717"/>
        </location>
    </feature>
    <feature type="active site" description="N6-AMP-lysine intermediate" evidence="10">
        <location>
            <position position="138"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <begin position="52"/>
            <end position="56"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <begin position="101"/>
            <end position="102"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="136"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="159"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="195"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="311"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="335"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="440"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="443"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="470"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01588"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU000618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="CTQ70836.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="723" mass="79278" checksum="C89813E1AEC4A803" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8X6</accession>
    <name>A0A0M7A8X6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Carboxylate/amino acid/amine transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02705</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71067.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02705"/>
    <dbReference type="EnsemblBacteria" id="CTQ71067">
        <property type="protein sequence ID" value="CTQ71067"/>
        <property type="gene ID" value="LAX5112_02705"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000620">
        <property type="entry name" value="EamA_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00892">
        <property type="entry name" value="EamA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="28"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="59"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="91"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="118"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="143"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="172"/>
            <end position="193"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="205"/>
            <end position="227"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="239"/>
            <end position="257"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="269"/>
            <end position="288"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="294"/>
            <end position="312"/>
        </location>
    </feature>
    <feature type="domain" description="EamA" evidence="2">
        <location>
            <begin position="26"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="domain" description="EamA" evidence="2">
        <location>
            <begin position="174"/>
            <end position="311"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ71067.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="333" mass="35817" checksum="ABB80848AFC9067F" modified="2015-12-09" version="1">MASKKSATQLSRAPAPTGMTRQAPLIGIGLKLASTIVFFAMVTVLKIAAERVPIGELVFARNFFGVFPVLIMVGVRGELGLAFQTQNPKGHLVRACIGLTAMVCMFTAFGLLPLPDATAINFATPLIVVVLAFFMLGETVRIYRWSAVAVGFVGILVVLSPHLGEGDFDNSATFGAIVGFMGAAFAALAMITVRRLCVTERTSTIVTWFSLSATVISLLTIPAGWIWPDQAWIIPDMETAALLVMIGLFGGVGQILLTQSYRYADASTIAPFDYVNMLWAILVGWVVFAEVPVLEVIVGAVIVMAAGIFVIYREHRLGLDRTKDRRASTPSKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A901</accession>
    <name>A0A0M7A901_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Protoheme IX farnesyltransferase</fullName>
            <ecNumber evidence="9">2.5.1.141</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">Heme B farnesyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="9">Heme O synthase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9 10" type="primary">ctaB</name>
        <name evidence="10" type="ORF">LAX5112_02359</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 9">
            <text>(2E,6E)-farnesyl diphosphate + H2O + heme b = diphosphate + Fe(II)-heme o</text>
            <dbReference type="Rhea" id="RHEA:28070"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
            <dbReference type="ChEBI" id="CHEBI:60530"/>
            <dbReference type="ChEBI" id="CHEBI:175763"/>
            <dbReference type="EC" id="2.5.1.141"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="9">Porphyrin-containing compound metabolism; heme O biosynthesis; heme O from protoheme: step 1/1.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cell membrane</location>
            <topology evidence="9">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="miscellaneous">
        <text evidence="9">Carbon 2 of the heme B porphyrin ring is defined according to the Fischer nomenclature.</text>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the UbiA prenyltransferase family. Protoheme IX farnesyltransferase subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.141" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70104.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671979.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02359"/>
    <dbReference type="EnsemblBacteria" id="CTQ70104">
        <property type="protein sequence ID" value="CTQ70104"/>
        <property type="gene ID" value="LAX5112_02359"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00834">
        <property type="reaction ID" value="UER00712"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008495">
        <property type="term" value="F:protoheme IX farnesyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048034">
        <property type="term" value="P:heme O biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd13957">
        <property type="entry name" value="PT_UbiA_Cox10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.357.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00154">
        <property type="entry name" value="CyoE_CtaB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006369">
        <property type="entry name" value="Protohaem_IX_farnesylTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000537">
        <property type="entry name" value="UbiA_prenyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030470">
        <property type="entry name" value="UbiA_prenylTrfase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044878">
        <property type="entry name" value="UbiA_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43448">
        <property type="entry name" value="PTHR43448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01040">
        <property type="entry name" value="UbiA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01473">
        <property type="entry name" value="cyoE_ctaB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00943">
        <property type="entry name" value="UBIA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 9" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7 9" id="KW-0350">Heme biosynthesis</keyword>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 9 10" id="KW-0808">Transferase</keyword>
    <keyword evidence="5 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 9" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="35"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="60"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="127"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="155"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="180"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="252"/>
            <end position="272"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="284"/>
            <end position="303"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000689"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023133"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00154"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ70104.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="311" mass="33465" checksum="3516C6515DE62DB6" modified="2015-12-09" version="1">MSLAERQDLMDQSSTVWNGGEGSVSDYVALLKPRVMSLVIFTAFVGMMLAPGSIHPVLGAVAILCIAIGAGASGALNMWYDADIDEVMSRTAKRPIPAGKVTPEEAFAFGITLSIGSVLTLGLLVNWFAGAFLAFTIAFYVVIYTMWLKRSTPQNIVIGGAAGAFPPMVGWASVTGGVSLESFVLFLIIFMWTPPHFWALALFKKGDYETAGVPMLPVVAGETNTRHQILIYSILLAPIGVAPYFMGYASLFYGVASGLLGLAFVAMAADIWRKREGDVARKACIRLFKFSIFYLFMLFALLLGESLVAGI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A947</accession>
    <name>A0A0M7A947_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Putative acetolactate synthase large subunit IlvX</fullName>
            <ecNumber evidence="4">2.2.1.6</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">ilvX</name>
        <name evidence="4" type="ORF">LAX5112_02383</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the TPP enzyme family.</text>
    </comment>
    <dbReference type="EC" id="2.2.1.6" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70154.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672000.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02383"/>
    <dbReference type="EnsemblBacteria" id="CTQ70154">
        <property type="protein sequence ID" value="CTQ70154"/>
        <property type="gene ID" value="LAX5112_02383"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003984">
        <property type="term" value="F:acetolactate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030976">
        <property type="term" value="F:thiamine pyrophosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044281">
        <property type="term" value="P:small molecule metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029061">
        <property type="entry name" value="THDP-binding"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012001">
        <property type="entry name" value="Thiamin_PyroP_enz_TPP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000399">
        <property type="entry name" value="TPP-bd_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045229">
        <property type="entry name" value="TPP_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011766">
        <property type="entry name" value="TPP_enzyme-bd_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18968">
        <property type="entry name" value="PTHR18968"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02775">
        <property type="entry name" value="TPP_enzyme_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02776">
        <property type="entry name" value="TPP_enzyme_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52518">
        <property type="entry name" value="SSF52518"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00187">
        <property type="entry name" value="TPP_ENZYMES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="TPP_enzyme_N" evidence="3">
        <location>
            <begin position="1"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="domain" description="TPP_enzyme_C" evidence="2">
        <location>
            <begin position="380"/>
            <end position="510"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007812"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02775"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF02776"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ70154.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="513" mass="53332" checksum="6535B9D3B12C1F40" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A955</accession>
    <name>A0A0M7A955_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Steroid Delta-isomerase</fullName>
            <ecNumber evidence="2">5.3.3.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ksi</name>
        <name evidence="2" type="ORF">LAX5112_02388</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="5.3.3.1" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70164.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672005.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70164">
        <property type="protein sequence ID" value="CTQ70164"/>
        <property type="gene ID" value="LAX5112_02388"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004769">
        <property type="term" value="F:steroid delta-isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032710">
        <property type="entry name" value="NTF2-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037401">
        <property type="entry name" value="SnoaL-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12680">
        <property type="entry name" value="SnoaL_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54427">
        <property type="entry name" value="SSF54427"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0413">Isomerase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SnoaL-like" evidence="1">
        <location>
            <begin position="15"/>
            <end position="108"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12680"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70164.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="138" mass="15112" checksum="7F276B53CC6223B0" modified="2015-12-09" version="1">MAAHITPQDAEEICKRYIAAVEAGDLSAIDTLFTQDAIVRTPVSGHKPARAFYAYVFKAISDRKMKLLDVLVGIAAPSRVALHMAYTRTVIGSPPATIETIDIFELTDRFDQISAVNIVYDTAPVRTDFETPKAQIDG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AA57</accession>
    <name>A0A0M7AA57_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Putative ubiquinone biosynthesis protein UbiB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">ubiB_1</name>
        <name evidence="10" type="ORF">LAX5112_02772</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Cofactor biosynthesis; ubiquinone biosynthesis [regulation].</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71296.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008193109.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02772"/>
    <dbReference type="EnsemblBacteria" id="CTQ71296">
        <property type="protein sequence ID" value="CTQ71296"/>
        <property type="gene ID" value="LAX5112_02772"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00232"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006744">
        <property type="term" value="P:ubiquinone biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd13972">
        <property type="entry name" value="UbiB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004147">
        <property type="entry name" value="ABC1_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010232">
        <property type="entry name" value="UbiB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045308">
        <property type="entry name" value="UbiB_bact"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03109">
        <property type="entry name" value="ABC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="SSF56112"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01982">
        <property type="entry name" value="UbiB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="10" id="KW-0830">Ubiquinone</keyword>
    <keyword evidence="5" id="KW-0831">Ubiquinone biosynthesis</keyword>
    <feature type="domain" description="ABC1" evidence="9">
        <location>
            <begin position="96"/>
            <end position="344"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005020"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022519"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022688"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF03109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ71296.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="527" mass="58568" checksum="7CDAF1F3255B8C73" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AA80</accession>
    <name>A0A0M7AA80_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Ribosome maturation factor RimP</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3 6" type="primary">rimP</name>
        <name evidence="6" type="ORF">LAX5112_02799</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Required for maturation of 30S ribosomal subunits.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the RimP family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71372.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008193613.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02799"/>
    <dbReference type="EnsemblBacteria" id="CTQ71372">
        <property type="protein sequence ID" value="CTQ71372"/>
        <property type="gene ID" value="LAX5112_02799"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042274">
        <property type="term" value="P:ribosomal small subunit biogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01734">
        <property type="entry name" value="YlxS_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01077">
        <property type="entry name" value="RimP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003728">
        <property type="entry name" value="Ribosome_maturation_RimP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028998">
        <property type="entry name" value="RimP_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036847">
        <property type="entry name" value="RimP_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028989">
        <property type="entry name" value="RimP_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035956">
        <property type="entry name" value="RimP_N_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33867">
        <property type="entry name" value="PTHR33867"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02576">
        <property type="entry name" value="DUF150"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17384">
        <property type="entry name" value="DUF150_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF74942">
        <property type="entry name" value="SSF74942"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75420">
        <property type="entry name" value="SSF75420"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0690">Ribosome biogenesis</keyword>
    <feature type="domain" description="DUF150" evidence="4">
        <location>
            <begin position="21"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="domain" description="DUF150_C" evidence="5">
        <location>
            <begin position="96"/>
            <end position="166"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022517"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01077"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF02576"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF17384"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ71372.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="198" mass="21526" checksum="87A959B1AD5A50AD" modified="2015-12-09" version="1">MSDQEPRIVTEQGLDARVAAIIEPVIEDLGYRLVRTRISAANGCTLQIMAERPDGTMTVDDCETISRAVSPALDVEDPINRAYHLEVSSPGIDRPLVRAGDFDRWAGHEMKVEMDVMQDGRKRFRGTLLGVEGVSAKMRLPDAPEGEADTVLLPMEDIGEAKLVLTDDLITAALQAEKAALAARGESADELTQDNTPN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAA4</accession>
    <name>A0A0M7AAA4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Protein-tyrosine-phosphatase</fullName>
            <ecNumber evidence="2">3.1.3.48</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">LAX5112_02862</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>H2O + O-phospho-L-tyrosyl-[protein] = L-tyrosyl-[protein] + phosphate</text>
            <dbReference type="Rhea" id="RHEA:10684"/>
            <dbReference type="Rhea" id="RHEA-COMP:10136"/>
            <dbReference type="Rhea" id="RHEA-COMP:10137"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:46858"/>
            <dbReference type="ChEBI" id="CHEBI:82620"/>
            <dbReference type="EC" id="3.1.3.48"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="3.1.3.48" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71551.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02862"/>
    <dbReference type="EnsemblBacteria" id="CTQ71551">
        <property type="protein sequence ID" value="CTQ71551"/>
        <property type="gene ID" value="LAX5112_02862"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004725">
        <property type="term" value="F:protein tyrosine phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023485">
        <property type="entry name" value="Ptyr_pPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036196">
        <property type="entry name" value="Ptyr_pPase_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01451">
        <property type="entry name" value="LMWPc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00226">
        <property type="entry name" value="LMWPc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52788">
        <property type="entry name" value="SSF52788"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0904">Protein phosphatase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="LMWPc" evidence="4">
        <location>
            <begin position="4"/>
            <end position="138"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00013064"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022912"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00226"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ71551.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="151" mass="16017" checksum="D0D6EFDC89A7B8AC" modified="2015-12-09" version="1">MPKTTVLFVCPDNSLLGPMAEACLNARGSGLMRAFSAGLQPAAQISKNVSRLLSAHGVSAQGLSPKSIEVFLMPHAIVPDRIIYLSDVNAILQPSSWKGTTSSHWWSVTDGGALSDDFAACSAYLKRIWQAIDGLIDPSVPSELSTGYKVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAD7</accession>
    <name>A0A0M7AAD7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Cyclic di-GMP phosphodiesterase Gmr</fullName>
            <ecNumber evidence="7">3.1.4.52</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">gmr_9</name>
        <name evidence="7" type="ORF">LAX5112_03034</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.4.52" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72068.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672521.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03034"/>
    <dbReference type="EnsemblBacteria" id="CTQ72068">
        <property type="protein sequence ID" value="CTQ72068"/>
        <property type="gene ID" value="LAX5112_03034"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071111">
        <property type="term" value="F:cyclic-guanylate-specific phosphodiesterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd01948">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01949">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00130">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.450">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001633">
        <property type="entry name" value="EAL_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035919">
        <property type="entry name" value="EAL_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000160">
        <property type="entry name" value="GGDEF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000014">
        <property type="entry name" value="PAS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000700">
        <property type="entry name" value="PAS-assoc_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035965">
        <property type="entry name" value="PAS-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00563">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00990">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00052">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00267">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141868">
        <property type="entry name" value="SSF141868"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55785">
        <property type="entry name" value="SSF55785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00254">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50883">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50887">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50113">
        <property type="entry name" value="PAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="73"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="102"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="141"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="168"/>
            <end position="186"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="193"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="domain" description="PAC" evidence="4">
        <location>
            <begin position="327"/>
            <end position="386"/>
        </location>
    </feature>
    <feature type="domain" description="GGDEF" evidence="6">
        <location>
            <begin position="419"/>
            <end position="551"/>
        </location>
    </feature>
    <feature type="domain" description="EAL" evidence="5">
        <location>
            <begin position="560"/>
            <end position="810"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="808"/>
            <end position="831"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="546"/>
            <end position="573"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50113"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ72068.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="831" mass="91186" checksum="70320D99E8164429" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAZ7</accession>
    <name>A0A0M7AAZ7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Gamma-butyrobetaine dioxygenase</fullName>
            <ecNumber evidence="8">1.14.11.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">LAX5112_02647</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Fe(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29033"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the gamma-BBH/TMLD family.</text>
    </comment>
    <dbReference type="EC" id="1.14.11.1" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70903.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672218.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02647"/>
    <dbReference type="EnsemblBacteria" id="CTQ70903">
        <property type="protein sequence ID" value="CTQ70903"/>
        <property type="gene ID" value="LAX5112_02647"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008336">
        <property type="term" value="F:gamma-butyrobetaine dioxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.2020.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.130.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038492">
        <property type="entry name" value="GBBH-like_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042098">
        <property type="entry name" value="TauD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003819">
        <property type="entry name" value="TauD/TfdA-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02668">
        <property type="entry name" value="TauD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 8" id="KW-0223">Dioxygenase</keyword>
    <keyword evidence="6" id="KW-0408">Iron</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5 8" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TauD" evidence="7">
        <location>
            <begin position="120"/>
            <end position="356"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001954"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008654"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022964"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF02668"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ70903.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="376" mass="42394" checksum="37486A3438AAD30E" modified="2015-12-09" version="1">MLGTGEEGVLLREKGLDVPLPDGRLAYFNYYWLKDNEPASFDPETRERVNDIFALAEEPKAQTAAIAGDHLEIQWQGAEHRSAIPMAQLVLYAKAQQRPDPANLPRKSWFADHYANMARFEYGSIASDADARKTWAGAMLTDGVSLITGMPNTDAGLTDLAGLLGYVRPSYFGHTFEVKTHIKPTNLAFTSKALPLHTDLPSEEFAPGIQYLHCRANSVEGGDSIFVDGLAVAEDFRAAYPDDFKLLVETDIPYYCEHDTFDMRARQHVIELDDYGNISGVTISQHHEDIFDLPQEALDAYYPAFCRFGRMMRDEKYVMRFRLNAGECIVFDNHRIVHGRVAYSATSGERHLRGCYTDRGELRSTYRILSGEGRFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AB49</accession>
    <name>A0A0M7AB49_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Radical SAM core domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">ydeM</name>
        <name evidence="8" type="ORF">LAX5112_02903</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the radical SAM superfamily. Anaerobic sulfatase-maturating enzyme family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71672.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02903"/>
    <dbReference type="EnsemblBacteria" id="CTQ71672">
        <property type="protein sequence ID" value="CTQ71672"/>
        <property type="gene ID" value="LAX5112_02903"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023885">
        <property type="entry name" value="4Fe4S-binding_SPASM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007197">
        <property type="entry name" value="rSAM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023867">
        <property type="entry name" value="Sulphatase_maturase_rSAM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43273">
        <property type="entry name" value="PTHR43273"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04055">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDG01384">
        <property type="entry name" value="thioether_bond_formation_requi"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR04085">
        <property type="entry name" value="rSAM_more_4Fe4S"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51918">
        <property type="entry name" value="RADICAL_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0408">Iron</keyword>
    <keyword evidence="5" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <feature type="domain" description="Radical SAM core" evidence="7">
        <location>
            <begin position="102"/>
            <end position="331"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023601"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ71672.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="476" mass="52153" checksum="CD66D500EE492BA6" modified="2015-12-09" version="1">MQVEMAGREAVPKTRFGVSGPITCRAIGSGKYLFLQAHSGSWIIVENHSVQDVQALLEAASSRLLDRFPDALETPLVAELYRAGLLSVNGRNAWDHVDFENETSRINTLILKMVGYCNIACTYCYDFEAATYKNRLTVEQGKKAIRGTLENAGPRLNILFHGGEPLLAYDAITDLVAYAQVEAQKTGTELLLSIQTNGTRFTPEIVKFLIKNRFSVGVSLDGPESVNDTFRVDFKGRGTWQNITEAISEFPELASQMGVLTTVTNANAARLKEVACHFRDWGVRCWDVTVFQAAGRATKKPSRFAPDLDELITSYMDLLDGVEADEFGDMEIRPVLHYVRNVLGYERPNMCLRNGCGAAKELVSVSADGTVEACDCISEPALSLGSLAEGGISGALSSAPAQNIRSRTVRNLTPCTTCDWRTFCGGTCLAKTGDVTKVDTGECAVSMALFPDILRRLANSDRLFRYAERFADPLAH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABB0</accession>
    <name>A0A0M7ABB0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Thiamine-phosphate pyrophosphorylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03173</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72415.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451026.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03173"/>
    <dbReference type="EnsemblBacteria" id="CTQ72415">
        <property type="protein sequence ID" value="CTQ72415"/>
        <property type="gene ID" value="LAX5112_03173"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00564">
        <property type="entry name" value="TMP_TenI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036206">
        <property type="entry name" value="ThiamineP_synth_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022998">
        <property type="entry name" value="ThiamineP_synth_TenI"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02581">
        <property type="entry name" value="TMP-TENI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51391">
        <property type="entry name" value="SSF51391"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TMP-TENI" evidence="1">
        <location>
            <begin position="6"/>
            <end position="185"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02581"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72415.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="212" mass="22451" checksum="E8FE7E844948A406" modified="2015-12-09" version="1">MNRPRLFLVTPPAFDTATLADQLKQAFAGGDIACVMIYMPDASTKDIQAAADVLVPIIQDGSAAALVYGDTQAAGRSGADGVHVDKSPEDVKLAVESFQPDRVVGTGGTKTKHDAMELAETGVDYLFFGKLDLTEKETAHDKTLSGANWWAELFETPCVALAGNTLDTLAEVAATGADFVALKDAVWHSEDIAKTISDANTVLEAHPFPEVD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABC5</accession>
    <name>A0A0M7ABC5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03087</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72179.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672573.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03087"/>
    <dbReference type="EnsemblBacteria" id="CTQ72179">
        <property type="protein sequence ID" value="CTQ72179"/>
        <property type="gene ID" value="LAX5112_03087"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_repeat"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="5"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72179.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="326" mass="34454" checksum="F938DE15A9C46E60" modified="2015-12-09" version="1">MPIVAPMDVDGFVVRAGFLGDAAYVATGEGAIHIVGTGEKLLAPHKSGLLAAEPSTDGTSLITSGDDGAIYTSSPDGSSELLAERPRKWIDLIACGPSGAVAFASGRTAWVRLSDGREKEFSHDRAVGGIAFAPKGLRLAVSRYDGANLWWAGTEGKPVNLTWKGAHLGTSFSPDGKYLVTAMQENALHGWRLSDSQDMRMTGYPAKVKSFSWSVKGKYLATSGANAAIVWPFFGKTGPMGQSPLQLGTRSDALVTAVACHPKEEVVALGYQDGMVMMSRFEDNAEVLLRRPGGHPITSLGWDNAGLRLAFGSEKNEAGIISLQDG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABI8</accession>
    <name>A0A0M7ABI8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02934</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71802.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672452.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ71802">
        <property type="protein sequence ID" value="CTQ71802"/>
        <property type="gene ID" value="LAX5112_02934"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="15"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71802.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="129" mass="14580" checksum="5DD2591B06D865D1" modified="2015-12-09" version="1">MSDTREEEEQKRDPSVTTGFTDGKGPATKLIKMCLGLEPHGEQEVIELGHALYRQWEQFYRPTSGTVAKTPDEIRQITNRMRDFVTSLRVLQSHGALPHPDDPDPGTPYPALSLGLINQWWHGIGDWKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACJ6</accession>
    <name>A0A0M7ACJ6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Protein-tyrosine-phosphatase</fullName>
            <ecNumber evidence="2">3.1.3.48</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">arsC_2</name>
        <name evidence="5" type="ORF">LAX5112_03239</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>H2O + O-phospho-L-tyrosyl-[protein] = L-tyrosyl-[protein] + phosphate</text>
            <dbReference type="Rhea" id="RHEA:10684"/>
            <dbReference type="Rhea" id="RHEA-COMP:10136"/>
            <dbReference type="Rhea" id="RHEA-COMP:10137"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:46858"/>
            <dbReference type="ChEBI" id="CHEBI:82620"/>
            <dbReference type="EC" id="3.1.3.48"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="3.1.3.48" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72599.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672662.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03239"/>
    <dbReference type="EnsemblBacteria" id="CTQ72599">
        <property type="protein sequence ID" value="CTQ72599"/>
        <property type="gene ID" value="LAX5112_03239"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004725">
        <property type="term" value="F:protein tyrosine phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023485">
        <property type="entry name" value="Ptyr_pPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036196">
        <property type="entry name" value="Ptyr_pPase_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01451">
        <property type="entry name" value="LMWPc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00226">
        <property type="entry name" value="LMWPc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52788">
        <property type="entry name" value="SSF52788"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-0904">Protein phosphatase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="LMWPc" evidence="4">
        <location>
            <begin position="2"/>
            <end position="140"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00013064"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022912"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00226"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ72599.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="163" mass="17419" checksum="245F5E4F76FECF2E" modified="2015-12-09" version="1">MRNALFVCTANSARSVLGEAILRHMSEGKFNTYSAGSTPRGMVNPDAISCLQRKNLPTEGFRSKSWEEFAGAEAPKMDLIITVCDSAAGEACPVWPGHPFVVHWGIADPASVEGDDATRAEAFDLAYDRLERRIGAMLALGDDVFSAADGKNRLSAIGALADD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACW4</accession>
    <name>A0A0M7ACW4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03195</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72477.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672632.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03195"/>
    <dbReference type="EnsemblBacteria" id="CTQ72477">
        <property type="protein sequence ID" value="CTQ72477"/>
        <property type="gene ID" value="LAX5112_03195"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="65"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="188"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="92"/>
            <end position="143"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72477.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="313" mass="33100" checksum="8931301B4D43CA4B" modified="2015-12-09" version="1">MRAGLIASLAGHSVFLVWGLIAFPDAKSFSVPQVETLPVDLVPIEEFTQLRLGEKNAEVRDVAALQPSDTPAEETPQPADKPGDSQVQQPSPPTTAPAPTPTPPEPEPVAEPEDAPEPAPAPEPVPAAEPEPAPEPEPVPQQEAAPAVQPILTSVAPRTKPAPPRPQRQEPRDESIVSDVAALLNKVEPAGQTGGQPDTPASLGTRQGAPNIRMTQSELDALRSQVAMCWSPPVGAVGAEDLNVRVRFNLSQNGEVSNGPEVMNSNANPAFRAAASSAVRAVMRCQPYSLPIAKYDAWQEVIINFDPREMLGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADJ4</accession>
    <name>A0A0M7ADJ4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Membrane fusion protein (MFP) family protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">hlyD</name>
        <name evidence="11" type="ORF">LAX5112_03272</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cell inner membrane</location>
            <topology evidence="8">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 8">Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72691.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672687.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03272"/>
    <dbReference type="EnsemblBacteria" id="CTQ72691">
        <property type="protein sequence ID" value="CTQ72691"/>
        <property type="gene ID" value="LAX5112_03272"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009306">
        <property type="term" value="P:protein secretion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039562">
        <property type="entry name" value="MFP_biotin_lipoyl_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006144">
        <property type="entry name" value="Secretion_HlyD_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010129">
        <property type="entry name" value="T1SS_HlyD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13533">
        <property type="entry name" value="Biotin_lipoyl_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01843">
        <property type="entry name" value="type_I_hlyD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00543">
        <property type="entry name" value="HLYD_FAMILY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 8" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="3 8" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="9" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2 8" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="32"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="domain" description="Biotin_lipoyl_2" evidence="10">
        <location>
            <begin position="81"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="9">
        <location>
            <begin position="236"/>
            <end position="292"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022519"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU365093"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF13533"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ72691.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="446" mass="48871" checksum="8F60011F7FEBEEE2" modified="2015-12-09" version="1">MAAKDTSDPLRKAVYGRVGLPLELEDGVPPAFYTRLLIGLTIATLALLVWAAIGQIREVANTIGEITPAGQILAVEHLEGGIVSEVLVEEGQLVMAGDPIARLEKEDTTAELGRIQSRLSYLELEEERLIAQEYNDPNTVGLRLDPTVNGLSAQQRAALTANRRAVADEQDAYTARVGQKRAEVASLEVQVELQKSQVELEKEKFQIQETLLKDGYTSRRRYLESKGEYQRSQVTLEQLVGNLAQAREMLTEAQASLNQAGAEVNRDVADERARIAQERAELAQEISKLKDRQDRLFVRAPVNGYIKTLGQTGRGAVVNPGDMIAEIVPQSESMVAEVKVNPRDIGHINVGDKAEITITSYDPNIYGTIVAEVETISASSFQDEYGEYYFKADLGFPGNTIGTGNVTSPVRPGMQVNAQVVTGSKSVLAYLLNPVTRAMRTVFSER</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADR7</accession>
    <name>A0A0M7ADR7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 18">Reaction center protein M chain</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="16 18">Photosynthetic reaction center M subunit</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="19" type="primary">pufM</name>
        <name evidence="19" type="ORF">LAX5112_02960</name>
    </gene>
    <organism evidence="19 20">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="20" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="20">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 18">The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis.</text>
    </comment>
    <comment type="subunit">
        <text evidence="18">Reaction center is composed of four bacteriochlorophylls, two bacteriopheophytins, two ubiquinones, one iron, and highly hydrophobic polypeptide chains.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3 18">Cellular chromatophore membrane</location>
            <topology evidence="3 18">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 17">Belongs to the reaction center PufL/M/PsbA/D family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71883.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672471.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02960"/>
    <dbReference type="EnsemblBacteria" id="CTQ71883">
        <property type="protein sequence ID" value="CTQ71883"/>
        <property type="gene ID" value="LAX5112_02960"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030077">
        <property type="term" value="C:plasma membrane light-harvesting complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042717">
        <property type="term" value="C:plasma membrane-derived chromatophore membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042314">
        <property type="term" value="F:bacteriochlorophyll binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045156">
        <property type="term" value="F:electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009772">
        <property type="term" value="P:photosynthetic electron transport in photosystem II"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd09291">
        <property type="entry name" value="Photo-RC_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.85.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036854">
        <property type="entry name" value="Photo_II_D1/D2_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000484">
        <property type="entry name" value="Photo_RC_L/M"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005781">
        <property type="entry name" value="Photo_RC_M"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00124">
        <property type="entry name" value="Photo_RC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00256">
        <property type="entry name" value="REACTNCENTRE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81483">
        <property type="entry name" value="SSF81483"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01115">
        <property type="entry name" value="pufM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00244">
        <property type="entry name" value="REACTION_CENTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="12 18" id="KW-0076">Bacteriochlorophyll</keyword>
    <keyword evidence="7 18" id="KW-0148">Chlorophyll</keyword>
    <keyword evidence="14 18" id="KW-0157">Chromophore</keyword>
    <keyword evidence="18" id="KW-0249">Electron transport</keyword>
    <keyword evidence="18" id="KW-0408">Iron</keyword>
    <keyword evidence="11 18" id="KW-0460">Magnesium</keyword>
    <keyword evidence="15 18" id="KW-0472">Membrane</keyword>
    <keyword evidence="10 18" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8 18" id="KW-0602">Photosynthesis</keyword>
    <keyword evidence="6 18" id="KW-0674">Reaction center</keyword>
    <keyword evidence="20" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9 18" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="13 18" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="18" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="18">
        <location>
            <begin position="51"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="18">
        <location>
            <begin position="114"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="18">
        <location>
            <begin position="146"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="18">
        <location>
            <begin position="204"/>
            <end position="226"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="18">
        <location>
            <begin position="268"/>
            <end position="291"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002611"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004548"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00008204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00018761"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022469"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022494"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022531"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022956"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00022991"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00031893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="RuleBase" id="RU004331"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="RuleBase" id="RU364137"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="EMBL" id="CTQ71883.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="320" mass="35757" checksum="3CFD91E298D92A61" modified="2015-12-09" version="1">MTQYQNILTIIQVSGPAEEGMPLPKDDSERIGTPIMSRLAGWLGNAQIGPIYLGFLGSLSLVFGLIAFEIIGLNMLASVGWDPIQFVRQLFWLGLEPPPAQYGLTMAPLNEGGWWQIAGFFLTASILLWWVRVYRRARQLELGTHIAWAFGSAIWLFLVLGFIRPILMGDFSEAVPFGIFPHLDWTAAFSIRYGNLYYNPFHCLSIVFLYGSVLLFAMHGATILAVGKYGGERELEQITDRGTASERAALFWRWTMGFNATMESVHRWAWWFAILTPLTGGIGILLTGTVVDNWYLWGIEHGIVSPTPDVWPGVVDPAAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADW3</accession>
    <name>A0A0M7ADW3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">NADH-quinone oxidoreductase subunit F</fullName>
            <ecNumber evidence="13">7.1.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="16" type="primary">nqo1_1</name>
        <name evidence="16" type="ORF">LAX5112_03485</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="17" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="13">NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 13">
            <text>a quinone + 5 H(+)(in) + NADH = a quinol + 4 H(+)(out) + NAD(+)</text>
            <dbReference type="Rhea" id="RHEA:57888"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:24646"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:132124"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 13">
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="3 13">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="4 13">Belongs to the complex I 51 kDa subunit family.</text>
    </comment>
    <dbReference type="EC" id="7.1.1.-" evidence="13"/>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73278.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672871.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03485"/>
    <dbReference type="EnsemblBacteria" id="CTQ73278">
        <property type="protein sequence ID" value="CTQ73278"/>
        <property type="gene ID" value="LAX5112_03485"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045271">
        <property type="term" value="C:respiratory chain complex I"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010181">
        <property type="term" value="F:FMN binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008137">
        <property type="term" value="F:NADH dehydrogenase (ubiquinone) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048038">
        <property type="term" value="F:quinone binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1440.230">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.11540">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001949">
        <property type="entry name" value="NADH-UbQ_OxRdtase_51kDa_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011537">
        <property type="entry name" value="NADH-UbQ_OxRdtase_suF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011538">
        <property type="entry name" value="Nuo51_FMN-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037225">
        <property type="entry name" value="Nuo51_FMN-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019575">
        <property type="entry name" value="Nuop51_4Fe4S-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037207">
        <property type="entry name" value="Nuop51_4Fe4S-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019554">
        <property type="entry name" value="Soluble_ligand-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01512">
        <property type="entry name" value="Complex1_51K"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10589">
        <property type="entry name" value="NADH_4Fe-4S"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10531">
        <property type="entry name" value="SLBB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00928">
        <property type="entry name" value="NADH_4Fe-4S"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF140490">
        <property type="entry name" value="SSF140490"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF142019">
        <property type="entry name" value="SSF142019"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01959">
        <property type="entry name" value="nuoF_fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00644">
        <property type="entry name" value="COMPLEX1_51K_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00645">
        <property type="entry name" value="COMPLEX1_51K_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 13" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="6 13" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="7 13" id="KW-0288">FMN</keyword>
    <keyword evidence="10 13" id="KW-0408">Iron</keyword>
    <keyword evidence="11 13" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="14" id="KW-0472">Membrane</keyword>
    <keyword evidence="8 13" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12 13" id="KW-0520">NAD</keyword>
    <keyword evidence="16" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="13" id="KW-0874">Quinone</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-1278">Translocase</keyword>
    <keyword evidence="14" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="14" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="105"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="domain" description="NADH_4Fe-4S" evidence="15">
        <location>
            <begin position="330"/>
            <end position="375"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000100"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00007523"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU364066"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="SMART" id="SM00928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="CTQ73278.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="433" mass="47487" checksum="40C499AE9CC5D6E5" modified="2015-12-09" version="1">MLQDKDRIFTNIYGLHDWGLEGAKKRGQWDNTKGLLDKGRDWIIQEMKDSGLRGRGGAGFPTGLKWSFMPKESDGRPAYLVVNADESEPGTCKDREILRHDPHTLVEGCLVAGFAMGAIAAYIYVRGEFIRERERLQAAIDQAYDAGLIGKNNKNGYDFDIYVHHGAGAYICGEETALLESLEGKKGQPRLKPPFPANVGLYGCPTTVNNVESIAVAPTILRRGGGWFASLGRPNNTGTKLFCVSGHVNQPATFEEELGIPFSEMIEKHCGGIRGGWDNLLAVIPGGSSVPCCTADEIKDAPMDFDTLRGMGSGLGTAAVIVMDKSTDVIKAIARLSYFYKHESCGQCTPCREGTGWMWRVMERMVKGESSYEEIDMLFKVTKQVEGHTICALGDAAAWPIQGLIKNFRPVIEQRIDDYVAKSRTSSTMVAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEZ7</accession>
    <name>A0A0M7AEZ7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">GTPase Obg</fullName>
            <ecNumber evidence="6">3.6.5.-</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">GTP-binding protein Obg</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9" type="primary">cgtA</name>
        <name evidence="6" type="synonym">obg</name>
        <name evidence="9" type="ORF">LAX5112_03614</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="6">Monomer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.</text>
    </comment>
    <dbReference type="EC" id="3.6.5.-" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73658.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672966.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03614"/>
    <dbReference type="EnsemblBacteria" id="CTQ73658">
        <property type="protein sequence ID" value="CTQ73658"/>
        <property type="gene ID" value="LAX5112_03614"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042254">
        <property type="term" value="P:ribosome biogenesis"/>
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        <property type="match status" value="1"/>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002401">
        <property type="entry name" value="GTP_bd_Obg/CgtA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00326">
        <property type="entry name" value="GTP1OBG"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82051">
        <property type="entry name" value="SSF82051"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02729">
        <property type="entry name" value="Obg_CgtA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51710">
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    <dbReference type="PROSITE" id="PS51883">
        <property type="entry name" value="OBG"/>
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    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 6" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="3 6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4 6" id="KW-0460">Magnesium</keyword>
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    <keyword evidence="2 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Obg" evidence="8">
        <location>
            <begin position="1"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="domain" description="OBG-type G" evidence="7">
        <location>
            <begin position="160"/>
            <end position="328"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="166"/>
            <end position="173"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="173"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
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    <feature type="binding site" evidence="6">
        <location>
            <begin position="191"/>
            <end position="195"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
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    <feature type="binding site" evidence="6">
        <location>
            <position position="193"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="212"/>
            <end position="215"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
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        <location>
            <begin position="280"/>
            <end position="283"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
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        <location>
            <begin position="309"/>
            <end position="311"/>
        </location>
        <ligand>
            <name>GTP</name>
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        </ligand>
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    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007699"/>
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        <source>
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    </evidence>
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            <dbReference type="ARBA" id="ARBA00022801"/>
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            <dbReference type="ARBA" id="ARBA00022842"/>
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        <source>
            <dbReference type="PROSITE" id="PS51710"/>
        </source>
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            <dbReference type="PROSITE" id="PS51883"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="EMBL" id="CTQ73658.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="348" mass="37177" checksum="BC1CAC8CEC657D81" modified="2015-12-09" version="1">MKFLDQAKIYVRSGNGGAGCVSFRREKYIEYGGPDGGDGGKGGDVIVECVDGLNTLIDYRYQQHFKAETGIHGMGKNRTGAHGGDVTLRVPVGTQILEEDNETIIADLTEIGQKVHLLRGGNGGFGNAHFKSSTNQAPRRANPGLEGEEKWIWLRLKLIADAGLVGLPNAGKSTFLATVSAAKPKIADYPFTTLHPNLGIVQIDGNSFAMADIPGLIEGAHEGTGLGDRFLGHVERTRVLLHLVDGSGEEDPGESYKVVRGELEAYGAGLTDKPEIVALSKCDALTEDMIAEKAASLEAACGQRPLILSSASGLNVDRALRMIVRAIDRDKEEAANQVPSPEQEGWHP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFI9</accession>
    <name>A0A0M7AFI9_9HYPH</name>
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        <submittedName>
            <fullName evidence="6">Copper efflux oxidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">cueO</name>
        <name evidence="6" type="ORF">LAX5112_03449</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
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    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
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            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
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        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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    </dbReference>
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        <property type="entry name" value="Cu_oxidase_Cu_BS"/>
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        <property type="entry name" value="Cupredoxin"/>
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    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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    </dbReference>
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    </dbReference>
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        <property type="entry name" value="SSF49503"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00080">
        <property type="entry name" value="MULTICOPPER_OXIDASE2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809628" evidence="3">
        <location>
            <begin position="29"/>
            <end position="497"/>
        </location>
    </feature>
    <feature type="domain" description="Plastocyanin-like" evidence="5">
        <location>
            <begin position="55"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="domain" description="Plastocyanin-like" evidence="4">
        <location>
            <begin position="387"/>
            <end position="496"/>
        </location>
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        <source>
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        </source>
    </evidence>
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        </source>
    </evidence>
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        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
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        </source>
    </evidence>
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            <dbReference type="Pfam" id="PF07732"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ73176.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="497" mass="54624" checksum="F888932AC12F0940" modified="2015-12-09" version="1">MSLRLSRRQLLAGSASLFGASLISPAWSTTIPEKLPIPPQADGTNEEPIDLRIRAGEHTFQAGLKTPTLGINQDFLGPTIRTRRNTELNLRYLNTLDEGVSIHGHGLHVPGDVDGGPQLEMAPGEGWQPSLSIVQPAATCWYHSHTHGKTGGQVYRGLAGMIIIDDDESDAMDLPNRYGVDDLPIIIQDRTFDAQGRFVYSLFDADEDGWFGDTVVINGAIAPLVADVPAGKVRLRLLNGANARFYVIAFSDNRVFHKIATDGGLLRAPVPMSTMEMSPGERCEVIVDLGDANPVELLTFFEDEVDDEGEGIVGSLSTLVGRSDAAPPRASLTLRPDALLVANNAPLPEKLAALSHPEEHEIKNVREFVLEMDHGGDHAGHDGHGKMDMTINGAVMDMSVINERVGLGVWERWRIRSDQGAHPFHIHGCSFLIEQMEGEVVPADQQGWKDTVVLDDDDWSEIVVRFDHVATEQYPYMYHCHILEHEDRGMMGQFTVT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFZ2</accession>
    <name>A0A0M7AFZ2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03433</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73130.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03433"/>
    <dbReference type="EnsemblBacteria" id="CTQ73130">
        <property type="protein sequence ID" value="CTQ73130"/>
        <property type="gene ID" value="LAX5112_03433"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ73130.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="74" mass="8331" checksum="E86AF6B8DD390188" modified="2015-12-09" version="1">MSTKRSRDFSDLTAIGVDIGKDVFHLVGFDASGTLALRMKIKRLDLFQLFEKLPRCIVGMEACLSAHFVSRTLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGU7</accession>
    <name>A0A0M7AGU7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">DNA polymerase III subunit delta</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03769</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74129.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673090.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03769"/>
    <dbReference type="EnsemblBacteria" id="CTQ74129">
        <property type="protein sequence ID" value="CTQ74129"/>
        <property type="gene ID" value="LAX5112_03769"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009360">
        <property type="term" value="C:DNA polymerase III complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003887">
        <property type="term" value="F:DNA-directed DNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008921">
        <property type="entry name" value="DNA_pol3_clamp-load_cplx_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010372">
        <property type="entry name" value="DNA_pol3_delta_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005790">
        <property type="entry name" value="DNA_polIII_delta"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06144">
        <property type="entry name" value="DNA_pol3_delta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48019">
        <property type="entry name" value="SSF48019"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01128">
        <property type="entry name" value="holA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0239">DNA-directed DNA polymerase</keyword>
    <keyword evidence="1" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="DNA_pol3_delta" evidence="2">
        <location>
            <begin position="24"/>
            <end position="191"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF06144"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ74129.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="346" mass="37619" checksum="DAC0AE22CC6A45EA" modified="2015-12-09" version="1">MSTLKAAEIDRFVSNPPDSGGVVLVFGPDTGLVSERASRLVAKASEGDSDPFNLIKIDASELSSDSSRLIDEVLTVPLFGGRRIVWVKDAGGKNLVPSVDPVLKLDDWQTLVVLEAGDIKKGVGLRKLIEPHKKAVALPCYADNDRGIDHLIDEETREAGLTISREARAALHSLLGGDRMASRGELKKLCLYAMQKERIDTEDVEAIIGDASAFETSELIDAAAGGDLSTLDHGLERLTDAGSKASVIANQALKHFQSLHRMRIEIDAGKSAQQVVDGQRPPIFFSRKPKFSQQLRIWTIKDLERAMGILSEATRVSRLNDNLGVPVLSEALLTVGRAARARSQRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHJ4</accession>
    <name>A0A0M7AHJ4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Efflux pump periplasmic linker BepF</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">bepF_5</name>
        <name evidence="4" type="ORF">LAX5112_03840</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74369.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673157.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03840"/>
    <dbReference type="EnsemblBacteria" id="CTQ74369">
        <property type="protein sequence ID" value="CTQ74369"/>
        <property type="gene ID" value="LAX5112_03840"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032317">
        <property type="entry name" value="HlyD_D23"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006143">
        <property type="entry name" value="RND_pump_MFP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16576">
        <property type="entry name" value="HlyD_D23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01730">
        <property type="entry name" value="RND_mfp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HlyD_D23" evidence="3">
        <location>
            <begin position="145"/>
            <end position="276"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="151"/>
            <end position="178"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF16576"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ74369.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="367" mass="38871" checksum="20105CD034098A05" modified="2015-12-09" version="1">MRIKFSYILAAGLAAGIGAWMYSGTVVIGGVGDGENAAPSPAQRIAQATDNLFKVQVVTLTAKERQAVLEVRGRTEAEAKVAVRSHITDDVVDRPAREGARVSAGDILCVLDRGARESRVLEAKAAVAEAEMLKEAATQLSSKGFTAETRVMTVQAQHDAAKARLEEAERALRQTVIRSPIDGVIESPMAEIGAQLDKGSICATVVNSDPMIAIGDVSELNISQISLNMPADVVLVTGENLEGHVRYISPSANPDTRTFRIEVEIPNEDGVARDGVTAVSRLPLPVEKAHKISPAILTLNDTGQVGIRGVGEDNVTVFYPVNVLGGEQDGMWVGGLPETVNAIVVGQEYVSDGVLVDPVFETAEISQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHL1</accession>
    <name>A0A0M7AHL1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Competence protein ComM</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">comM</name>
        <name evidence="3" type="ORF">LAX5112_03685</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the Mg-chelatase subunits D/I family. ComM subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ73896.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673030.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03685"/>
    <dbReference type="EnsemblBacteria" id="CTQ73896">
        <property type="protein sequence ID" value="CTQ73896"/>
        <property type="gene ID" value="LAX5112_03685"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045006">
        <property type="entry name" value="CHLI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004482">
        <property type="entry name" value="Mg_chelat-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025158">
        <property type="entry name" value="Mg_chelat-rel_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000523">
        <property type="entry name" value="Mg_chelatse_chII-like_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014721">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold_subgr"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32039">
        <property type="entry name" value="PTHR32039"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32039:SF7">
        <property type="entry name" value="PTHR32039:SF7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01078">
        <property type="entry name" value="Mg_chelatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13335">
        <property type="entry name" value="Mg_chelatase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="SSF54211"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00368">
        <property type="entry name" value="TIGR00368"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA" evidence="2">
        <location>
            <begin position="209"/>
            <end position="391"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006354"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ73896.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="508" mass="53725" checksum="149B5E4BFB6B9F7F" modified="2015-12-09" version="1">MVSRVTTVAFQGIEAVPVDVQVHVGPGMVAFTIVGLPDKAVAESRERVRAALSASGLALPAKRVTVNLAPADLPKEGSHYDLPIALGVMAAIGAIPAEFLENYVILGELALDGTLAPVAGVLPAAMSANALEKGLICPFECGGEAAWADGEMDILAPRSLIQLANHFKGTQVLSRPAAKLRGDPVGIPDLTDVKGQESAKRALEIAAAGGHNLLMVGPPGSGKSMLASRLPSILPPLTPRELLEVSMIASLAGELADGKLSDRRPFRAPHHSASMAALVGGGLRAKPGEVSLAHNGVLFLDELPEFNPQVLDSLRQPLETGEAIIARANHRVTYPARIQMVAAMNPCRCGHAGEPGHQCRRGERCVTEYQARISGPFLDRIDLRIEVPAVTAADLIGPAESEPSSEVAKRVLVARKLQEQRFFDLGVAARTNAQAPASVVEKMAQPDDKGLAFLREAAETLQLSARGYHRVLKLARTLADLDGLETVARIHLAEALSYRGQDLSRRAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHY2</accession>
    <name>A0A0M7AHY2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Phosphate-import permease protein PhnE</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">phnE_4</name>
        <name evidence="7" type="ORF">LAX5112_03525</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73383.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03525"/>
    <dbReference type="EnsemblBacteria" id="CTQ73383">
        <property type="protein sequence ID" value="CTQ73383"/>
        <property type="gene ID" value="LAX5112_03525"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015416">
        <property type="term" value="F:ABC-type phosphonate transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005769">
        <property type="entry name" value="PhnE/PtxC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01097">
        <property type="entry name" value="PhnE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="26"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="89"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="134"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="217"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="242"/>
            <end position="261"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="281"/>
            <end position="300"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="83"/>
            <end position="265"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ73383.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="301" mass="32780" checksum="2ABA0AD9FDAB2CB9" modified="2015-12-09" version="1">MTSIVNVLNTGEPVLEVPGRTTQEKVFDVLIWGGLIVMLVWSFHPADMHRMGQVFTGGGNMAMLLEDFLKPNFRYWHSYFDLMLETVQMAVWGSFLSVILAVPFGLLSSSNIAPYWIVFPVRRLMDAFRAINELVFALIFVAAVGLGPLAGVLALMIHTTGTLAKLFSEAVEAIDPRPVEGIKATGAPAIQEIVYGVVPQVLPLWISYSLYRFEANVRSATVLGIVGAGGIGMSLSEALRGFDYSAGAAILLIILVTVSLLDIFGSLLRKVVIDGTDHGRFAAYFLFLTLLVIGLETLLAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIF7</accession>
    <name>A0A0M7AIF7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Transcriptional regulator, Acidobacterial, PadR-family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03841</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74371.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673231.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03841"/>
    <dbReference type="EnsemblBacteria" id="CTQ74371">
        <property type="protein sequence ID" value="CTQ74371"/>
        <property type="gene ID" value="LAX5112_03841"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018309">
        <property type="entry name" value="Tscrpt_reg_PadR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005149">
        <property type="entry name" value="Tscrpt_reg_PadR_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03551">
        <property type="entry name" value="PadR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10400">
        <property type="entry name" value="Vir_act_alpha_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PadR" evidence="1">
        <location>
            <begin position="8"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="domain" description="Vir_act_alpha_C" evidence="2">
        <location>
            <begin position="94"/>
            <end position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03551"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF10400"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ74371.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="185" mass="20312" checksum="C3BAD37F1CC1C14F" modified="2015-12-09" version="1">MSVRGLCLAILSGGDATGYEIRKESTEGRFSYFDDASFGSIYPALARLEAEGMVTVREEPQAGKPSRKVYSITQAGRDEFIRSLCEPQAPDTFKSPFLLIALNAAKLPPDVLRRALERRKAQVHEELRLLSGIDNENGCTHAGSDWTRDYGIACMNFTLRYLEDHGEALIKIAEDAAAPSQAAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIP4</accession>
    <name>A0A0M7AIP4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03607</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73643.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ73643">
        <property type="protein sequence ID" value="CTQ73643"/>
        <property type="gene ID" value="LAX5112_03607"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ73643.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="252" mass="28169" checksum="45722F752DFBAA78" modified="2015-12-09" version="1">MDSNLARLQKQLMGDGPAEKQVLLMKLLHEFETAPDFGETYIADATSAPQRWIARIGALLARAGFEHKIAFRSCRQTTVQYWKVSREPFRQLLLAAAEEIKLELELDGHEDIGQVYGSQQQYDFLRDLKEIILGAQSEVFVVDPYFDGQAFETFLGPIGGSCSIRVLCSRYSNDVAGHAKAFEAQYGVKPDLRKSRDLHDRLVIIDGTDCWIVGGSIKDAGKKPTYLVPLQPHIAPTKIAIYDGLWQQATPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJQ8</accession>
    <name>A0A0M7AJQ8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Carnitine catabolism transcriptional activator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">cdhR_7</name>
        <name evidence="2" type="ORF">LAX5112_04018</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74877.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673303.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74877">
        <property type="protein sequence ID" value="CTQ74877"/>
        <property type="gene ID" value="LAX5112_04018"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002818">
        <property type="entry name" value="DJ-1/PfpI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01965">
        <property type="entry name" value="DJ-1_PfpI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="SSF52317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="1">
        <location>
            <begin position="224"/>
            <end position="322"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74877.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="341" mass="38001" checksum="7AF6766925C478BA" modified="2015-12-09" version="1">MTNRLSNCIAEIALLNYPECQLAAVHGLTDLFRIASEWSDAGSDRWIRVTHWAPHAGNNSPEITCTFDTHPGANHRADYVIVPPSIAMPEKMQSVPEAAKWLTHQHGRGSRICSVCAGAFVLAESGLIDGRQVTTHWAFAQELASKYPEVSVADQHMVLDDGDIITAGGILAWTDLGLTLVDRLMGPSTMLATARFLLIDPPRQLQRPFSQFIPRFDHGDDSILSVQHHIHAHVADPHSLEELSSVANLGIRTFLRRFAKATGLKPTEYVQNVRISKAREHLELTVKTVDQITWDVGYSDPAAFRKVFHRLTGLTPNSYRQRFGLVFAHKHQEKEVKPISS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKG1</accession>
    <name>A0A0M7AKG1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative GST-like protein YibF</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yibF</name>
        <name evidence="2" type="ORF">LAX5112_04123</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75137.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673387.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04123"/>
    <dbReference type="EnsemblBacteria" id="CTQ75137">
        <property type="protein sequence ID" value="CTQ75137"/>
        <property type="gene ID" value="LAX5112_04123"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006749">
        <property type="term" value="P:glutathione metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036282">
        <property type="entry name" value="Glutathione-S-Trfase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004045">
        <property type="entry name" value="Glutathione_S-Trfase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034343">
        <property type="entry name" value="YibF"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42673:SF12">
        <property type="entry name" value="PTHR42673:SF12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13417">
        <property type="entry name" value="GST_N_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47616">
        <property type="entry name" value="SSF47616"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50404">
        <property type="entry name" value="GST_NTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GST N-terminal" evidence="1">
        <location>
            <begin position="1"/>
            <end position="81"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50404"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75137.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="216" mass="23717" checksum="D21DEFC4E77BFEBC" modified="2015-12-09" version="1">MMKLRSSPPSPFGRKVKLAMAILGLKDRIEIVEANTADPSDDLRSQNPLGKIPALVLENGDVIYDSSVILEYLDFLAGGGKLFPQGEARYLVLRDQALANGMMDAAILRVYEKRFKEPKFRDPAWDTYQAAKMDRALAHFEANAPAAPKSADDIDAGTLTLACALGYLDIRYNGDWRSDHPKLVAWLDAFETAVPAFADTKMPAAPVPDNDPAPLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKJ1</accession>
    <name>A0A0M7AKJ1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04059</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ74962.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04059"/>
    <dbReference type="EnsemblBacteria" id="CTQ74962">
        <property type="protein sequence ID" value="CTQ74962"/>
        <property type="gene ID" value="LAX5112_04059"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009506">
        <property type="entry name" value="DUF1127"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06568">
        <property type="entry name" value="DUF1127"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ74962.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="50" mass="5851" checksum="596D82603E9E5236" modified="2015-12-09" version="1">MFDTVVRKYNNWKSYRRAVDELSSLSSRELQDLGISRGDIKFVARRSLEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKJ6</accession>
    <name>A0A0M7AKJ6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="12">Type I secretion system ATP-binding protein PrsD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">prsD</name>
        <name evidence="12" type="ORF">LAX5112_04218</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75409.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04218"/>
    <dbReference type="EnsemblBacteria" id="CTQ75409">
        <property type="protein sequence ID" value="CTQ75409"/>
        <property type="gene ID" value="LAX5112_04218"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030256">
        <property type="term" value="C:type I protein secretion system complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030253">
        <property type="term" value="P:protein secretion by the type I secretion system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1560.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011527">
        <property type="entry name" value="ABC1_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036640">
        <property type="entry name" value="ABC1_TM_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010128">
        <property type="entry name" value="ATPase_T1SS_PrtD-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24222:SF0">
        <property type="entry name" value="PTHR24222:SF0"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00664">
        <property type="entry name" value="ABC_membrane"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90123">
        <property type="entry name" value="SSF90123"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01842">
        <property type="entry name" value="type_I_sec_PrtD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50929">
        <property type="entry name" value="ABC_TM1F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7 12" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="3 7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 9" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="54"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="156"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="11">
        <location>
            <begin position="19"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="10">
        <location>
            <begin position="327"/>
            <end position="562"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="552"/>
            <end position="583"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="361"/>
            <end position="368"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ75409.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="583" mass="63303" checksum="DA2E0D08F744F590" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AL23</accession>
    <name>A0A0M7AL23_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">LPS-assembly protein LptD</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1 4" type="primary">lptD</name>
        <name evidence="4" type="ORF">LAX5112_03877</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane.</text>
    </comment>
    <comment type="subunit">
        <text evidence="1">Component of the lipopolysaccharide transport and assembly complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell outer membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the LptD family.</text>
    </comment>
    <comment type="caution">
        <text evidence="1">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74483.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673183.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03877"/>
    <dbReference type="EnsemblBacteria" id="CTQ74483">
        <property type="protein sequence ID" value="CTQ74483"/>
        <property type="gene ID" value="LAX5112_03877"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009279">
        <property type="term" value="C:cell outer membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043165">
        <property type="term" value="P:Gram-negative-bacterium-type cell outer membrane assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015920">
        <property type="term" value="P:lipopolysaccharide transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010033">
        <property type="term" value="P:response to organic substance"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01411">
        <property type="entry name" value="LPS_assembly_LptD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020889">
        <property type="entry name" value="LipoPS_assembly_LptD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045659">
        <property type="entry name" value="LptD_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007543">
        <property type="entry name" value="LptD_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04453">
        <property type="entry name" value="LptD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19838">
        <property type="entry name" value="LptD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0998">Cell outer membrane</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5008992017" description="LPS-assembly protein LptD" evidence="1">
        <location>
            <begin position="41"/>
            <end position="790"/>
        </location>
    </feature>
    <feature type="domain" description="LptD_2" evidence="3">
        <location>
            <begin position="206"/>
            <end position="293"/>
        </location>
    </feature>
    <feature type="domain" description="LptD" evidence="2">
        <location>
            <begin position="312"/>
            <end position="695"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01411"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF04453"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF19838"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ74483.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="790" mass="87689" checksum="4B6CE3FBC1A0C0A2" modified="2015-12-09" version="1" precursor="true"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALD9</accession>
    <name>A0A0M7ALD9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04416</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75938.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673626.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000023.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75938">
        <property type="protein sequence ID" value="CTQ75938"/>
        <property type="gene ID" value="LAX5112_04416"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ75938.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="92" mass="10718" checksum="FDB0DF1D94C33457" modified="2015-12-09" version="1">MTDLSDDAKAIAAQFHTQTEMTFKMIEARPSDRYQAGLDELVKRNLLTVEPFNQFGGLVYKKVPEADYSPYMKWFWENPEKGKFPITTPIRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALX6</accession>
    <name>A0A0M7ALX6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04481</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ76138.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673677.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000024.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04481"/>
    <dbReference type="EnsemblBacteria" id="CTQ76138">
        <property type="protein sequence ID" value="CTQ76138"/>
        <property type="gene ID" value="LAX5112_04481"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="53"/>
            <end position="79"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76138.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="79" mass="9063" checksum="5A0095743C714175" modified="2015-12-09" version="1">MTEIYSKPRQQAEVAFGKNQSQFFERQRAIEDLNSIVVARNEKTLRLREARLAKERKDNMASATKPAPKRAKKSTGRSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AM91</accession>
    <name>A0A0M7AM91_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Antibiotic biosynthesis monooxygenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04539</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000025">
        <property type="protein sequence ID" value="CTQ76258.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673728.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000025.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04539"/>
    <dbReference type="EnsemblBacteria" id="CTQ76258">
        <property type="protein sequence ID" value="CTQ76258"/>
        <property type="gene ID" value="LAX5112_04539"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004497">
        <property type="term" value="F:monooxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007138">
        <property type="entry name" value="ABM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03992">
        <property type="entry name" value="ABM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51725">
        <property type="entry name" value="ABM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0503">Monooxygenase</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABM" evidence="1">
        <location>
            <begin position="2"/>
            <end position="90"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51725"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76258.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="118" mass="13958" checksum="837D8C83021730D0" modified="2015-12-09" version="1">MIAVIFEVIPHEDKKQDYLDMAAEMRPLVEEIDGFLSVERFQSLTNPEKLLSLSFFRDEGALDQWRQLTQHRKAQSIGRNSYFKDYRLRVSHVLRDYGMSERAEAPSDSRALHDRQER</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMG2</accession>
    <name>A0A0M7AMG2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">ABC-type sugar transport system, periplasmic component</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_04558</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000026">
        <property type="protein sequence ID" value="CTQ76328.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673780.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000026.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04558"/>
    <dbReference type="EnsemblBacteria" id="CTQ76328">
        <property type="protein sequence ID" value="CTQ76328"/>
        <property type="gene ID" value="LAX5112_04558"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008643">
        <property type="term" value="P:carbohydrate transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025997">
        <property type="entry name" value="SBP_2_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13407">
        <property type="entry name" value="Peripla_BP_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0762">Sugar transport</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809460" evidence="1">
        <location>
            <begin position="23"/>
            <end position="316"/>
        </location>
    </feature>
    <feature type="domain" description="Peripla_BP_4" evidence="2">
        <location>
            <begin position="35"/>
            <end position="282"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13407"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ76328.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="316" mass="33148" checksum="01C4FEEB831220D5" modified="2015-12-09" version="1">MISTLKSLLLAAAVIAAPLAGAQVASAEGEKYILVSHAPDSDSWWNTIKNGIALAGDQMGVDVEYRNPPTGDLADMARIIEQAAASGPNGIITTLSDPDVLSGPIKDAVASGIDVIIMNSGTPDQAREVGALMYVGQPEYDAGHAAGMRAKGDGMTSFLCVNHYISSPSSTERCQGFADGLGVELGDQMIDSGQDPAEIKNRVLAYLNANPDTDAVLTLGPTSADPTLLALDENGMAGDIYFGTFDLGENIVEGIKSGVINWGIDQQPFLQAYLPVVVLTNYHRYGVLPGNNINSGPGFVTKDGLTLVEKFAGEYR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMQ0</accession>
    <name>A0A0M7AMQ0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04496</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000025">
        <property type="protein sequence ID" value="CTQ76169.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008195940.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000025.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04496"/>
    <dbReference type="EnsemblBacteria" id="CTQ76169">
        <property type="protein sequence ID" value="CTQ76169"/>
        <property type="gene ID" value="LAX5112_04496"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021335">
        <property type="entry name" value="DUF2948"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11164">
        <property type="entry name" value="DUF2948"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ76169.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="146" mass="16284" checksum="2CF6B954EAC8129D" modified="2015-12-09" version="1">MDQLKLAALDEEDLQVLSAHVQDAVITIADIRYLPKEKRAVFIMNRFVWDKKADKRTKEHERRRSAFAVSRVTGMKAHKIQQDAKDVVLELLAVTFKAGDEAPNGQIELAFSGGSSIQLDVECIEAQLSDLGAAWSTPNLPQHDLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANT6</accession>
    <name>A0A0M7ANT6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Salmolysin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">slyA_5</name>
        <name evidence="2" type="ORF">LAX5112_04461</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ76086.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008194148.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000024.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04461"/>
    <dbReference type="EnsemblBacteria" id="CTQ76086">
        <property type="protein sequence ID" value="CTQ76086"/>
        <property type="gene ID" value="LAX5112_04461"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000835">
        <property type="entry name" value="HTH_MarR-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01047">
        <property type="entry name" value="MarR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00598">
        <property type="entry name" value="HTHMARR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00347">
        <property type="entry name" value="HTH_MARR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50995">
        <property type="entry name" value="HTH_MARR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH marR-type" evidence="1">
        <location>
            <begin position="1"/>
            <end position="137"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76086.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="148" mass="17138" checksum="8639F41B49487CE3" modified="2015-12-09" version="1">MHDLDRKLGTLFSDIARFRRILFDQLATEYDLTHVQVFLLNHLHKDDGLTQTDLASRMDIGTVTISGLVDRLEAKGYVERRPDDKDRRAKRVWLTPKMQEVWKKIGESMRQMNEVTFEGVDESDIEHLITTLRKARQNLQGRLSGTGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APU9</accession>
    <name>A0A0M7APU9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04599</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000027">
        <property type="protein sequence ID" value="CTQ76462.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008192188.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000027.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04599"/>
    <dbReference type="EnsemblBacteria" id="CTQ76462">
        <property type="protein sequence ID" value="CTQ76462"/>
        <property type="gene ID" value="LAX5112_04599"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="18"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="42"/>
            <end position="60"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76462.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="62" mass="7058" checksum="B2F46F3683D56C90" modified="2015-12-09" version="1">MTVFLNGLMKFRRGPWEMLASVLIAIGVIMLMQPLAMWAYTYSFIVTLTGTVMFIVVSHFPD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APW9</accession>
    <name>A0A0M7APW9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">PpiC domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04677</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000028">
        <property type="protein sequence ID" value="CTQ76697.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673859.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000028.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04677"/>
    <dbReference type="EnsemblBacteria" id="CTQ76697">
        <property type="protein sequence ID" value="CTQ76697"/>
        <property type="gene ID" value="LAX5112_04677"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003755">
        <property type="term" value="F:peptidyl-prolyl cis-trans isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000297">
        <property type="entry name" value="PPIase_PpiC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13145">
        <property type="entry name" value="Rotamase_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PpiC" evidence="1">
        <location>
            <begin position="119"/>
            <end position="241"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13145"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76697.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="283" mass="31095" checksum="DEEC33D76BE6723F" modified="2015-12-09" version="1">MSFLKEPFFHFALLGAIVFAWFSFANPEPFQGPSPGQGHNEITIDQPLIGAMKAQFRAKLNRNPTALELNGVIDNHVKTEIMVREAKSLGLDDGDSIIRNRLVQKMTFLATSAAQAVVPDDETLKAYLNNNAEQFVSAARISFDQFGLGETIESVDVVSVAASLKNGEQPDVSFLRFLPEAIKDANARQIDATFGKGFFEQLADLPIGTWSGPVRSGFGYHLVRVSELVPPSLPPLSSIRDKVLFGWQQSLAEDLSEAQDASLQEGYVISRPTPEELEAWVTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQ65</accession>
    <name>A0A0M7AQ65_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_04414</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75933.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75933">
        <property type="protein sequence ID" value="CTQ75933"/>
        <property type="gene ID" value="LAX5112_04414"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809587" evidence="2">
        <location>
            <begin position="21"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="28"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="43"/>
            <end position="57"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ75933.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="100" mass="10932" checksum="B97EB5F30A5D1AA5" modified="2015-12-09" version="1">MNRPWMLLLVLLFLSSCATVEDRATSAGDRLGKAAAEAKPDPALPADCRRKERSGVREGEPMDVALIKTDQALGRANARVRRCAAWHDGFRADLKKAGLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQC2</accession>
    <name>A0A0M7AQC2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04683</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000028">
        <property type="protein sequence ID" value="CTQ76711.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673864.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000028.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04683"/>
    <dbReference type="EnsemblBacteria" id="CTQ76711">
        <property type="protein sequence ID" value="CTQ76711"/>
        <property type="gene ID" value="LAX5112_04683"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022028">
        <property type="entry name" value="DUF3604"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12228">
        <property type="entry name" value="DUF3604"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809589" evidence="1">
        <location>
            <begin position="24"/>
            <end position="633"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76711.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="633" mass="69572" checksum="6FF0FE8108233487" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQE1</accession>
    <name>A0A0M7AQE1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Putative ABC transporter-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_04602</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the bacterial solute-binding protein 1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000027">
        <property type="protein sequence ID" value="CTQ76470.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673790.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000027.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04602"/>
    <dbReference type="EnsemblBacteria" id="CTQ76470">
        <property type="protein sequence ID" value="CTQ76470"/>
        <property type="gene ID" value="LAX5112_04602"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006059">
        <property type="entry name" value="SBP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13416">
        <property type="entry name" value="SBP_bac_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0574">Periplasm</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="6">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809527" evidence="6">
        <location>
            <begin position="26"/>
            <end position="439"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008520"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ76470.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="439" mass="48679" checksum="B0B3E29623F8152B" modified="2015-12-09" version="1">MKTAKLLAATALVAASGVLAPQAQADELTLCWAAWDPANALVELSKEFEAQSGHTMKFEFVPWPNFADRMLNELNSGGKLCDLLIGDSQWIGGGAENGHYVKLNDFFDKEGISMDDFAPATVYAYSTWPKGTPNYYALPAMGDANGWFYRKDWFEKSEIQEAFKSEHGRDLAPPKTQMELLEIAQFFQEREIDGQKRYGAAIFTERGSEGITMGATSSMYPFGFKYEMTPGKYDMEGAVNSPEAVAGLEFYKKLYKTATPPGYTDSYMEQSLDAFKSGQVAMAMNWFAFFPGLYADPDTGGDKIGFFVNPGQAKEASTLGGQGISVVAYSDKQDAALEYIKWFAQPSVQSKWWDLGGYSCHVSVLNDPSFADSAPFASDFLLAMDGVMDFWQEPAYAELLLAMQKRLHDYVVADQGTAQEALDKLIEDWTETFEDEGKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARP8</accession>
    <name>A0A0M7ARP8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Glutamate synthase [NADPH] large chain</fullName>
            <ecNumber evidence="7">1.4.1.13</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">gltA_4</name>
        <name evidence="7" type="ORF">LAX5112_04875</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the glutamate synthase family.</text>
    </comment>
    <dbReference type="EC" id="1.4.1.13" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000033">
        <property type="protein sequence ID" value="CTQ77327.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674022.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000033.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04875"/>
    <dbReference type="EnsemblBacteria" id="CTQ77327">
        <property type="protein sequence ID" value="CTQ77327"/>
        <property type="gene ID" value="LAX5112_04875"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051537">
        <property type="term" value="F:2 iron, 2 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004355">
        <property type="term" value="F:glutamate synthase (NADPH) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006537">
        <property type="term" value="P:glutamate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd02808">
        <property type="entry name" value="GltS_FMN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.102.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024188">
        <property type="entry name" value="GltB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043578">
        <property type="entry name" value="GltB_archl_type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002932">
        <property type="entry name" value="Glu_synthdom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017941">
        <property type="entry name" value="Rieske_2Fe-2S"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036922">
        <property type="entry name" value="Rieske_2Fe-2S_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01645">
        <property type="entry name" value="Glu_synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00355">
        <property type="entry name" value="Rieske"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF500061">
        <property type="entry name" value="GOGAT_lg2_archl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006429">
        <property type="entry name" value="GOGAT_lg_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50022">
        <property type="entry name" value="SSF50022"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51296">
        <property type="entry name" value="RIESKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0408">Iron</keyword>
    <keyword evidence="4" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Rieske" evidence="6">
        <location>
            <begin position="4"/>
            <end position="98"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009716"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRNR" id="PIRNR006429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51296"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ77327.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="536" mass="58515" checksum="F16B1AC3E98D33C3" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASD7</accession>
    <name>A0A0M7ASD7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DUF4167 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_04823</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000032">
        <property type="protein sequence ID" value="CTQ77170.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04823"/>
    <dbReference type="EnsemblBacteria" id="CTQ77170">
        <property type="protein sequence ID" value="CTQ77170"/>
        <property type="gene ID" value="LAX5112_04823"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025430">
        <property type="entry name" value="DUF4167"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13763">
        <property type="entry name" value="DUF4167"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF4167" evidence="2">
        <location>
            <begin position="8"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="72"/>
            <end position="232"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="79"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="199"/>
            <end position="222"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ77170.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="232" mass="25026" checksum="EA77073B27D1D3AF" modified="2015-12-09" version="1">MRPGNQSNKRMRGRGRKGPNPLTRTYESNGPDVKIRGTAMHVAEKYQQLARDAQASGDRVMSENYNQHAEHYLRIVAAAQPPQQNTQHTARNEADDNQDQAAVNGSGGSQGSDQPSKPTADNTVVDGDAPQPFIDNMPVIDQEGQVNGAAQSSDESGEAEEKPRRKTRTPRARSPRKAASEAGSESEAQAGADGPEAADEGEEQPKPRRRTTRTRRTKATEDTPSETAAAGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ATH1</accession>
    <name>A0A0M7ATH1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04733</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000029">
        <property type="protein sequence ID" value="CTQ76874.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673905.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000029.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76874">
        <property type="protein sequence ID" value="CTQ76874"/>
        <property type="gene ID" value="LAX5112_04733"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76874.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="375" mass="40913" checksum="B4849626CBD65EB0" modified="2015-12-09" version="1">MVVKAAQNALTQSKDDKPAEQELETKVSEDTPALALAGLQFFVADISQKTILWHEIGSQSFHSEVKDLQEAPSNLALRNLSPEDRKTILRLIQGAIRDGVAGPFDVGGGPDHRIPGIPIVAHRYELVDGRIVVICFPSIGEDENPGRIVLGLAPILQHFVASSNRVVLLIDNFGYVRFASDGFVKTFQIEDARLIIGRNIAHIQKRVGRTIVSLALGALTRRASASGRGKFLLASNDAIELTYEAMHFRIGGTVGGVLFSAGRIGGDVDFLKVFEICSAPMLVINTKSKMIIAANKAAMKTYHLTNEIMDSKPVTEILLHPNNYSSLLGAAQSETEIPMSIPVNILNGQTKKKRFRAMLVDKDSKEPKLVLETRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ATH8</accession>
    <name>A0A0M7ATH8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04796</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000031">
        <property type="protein sequence ID" value="CTQ77083.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77083">
        <property type="protein sequence ID" value="CTQ77083"/>
        <property type="gene ID" value="LAX5112_04796"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="58"/>
            <end position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77083.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="77" mass="8824" checksum="E00340C494A3A071" modified="2015-12-09" version="1">MSSTNCKYAKSNLGSRLVLIELIHKLFSGWYGHPRKRAVLSDLPAALKRDIGLEDIRPSPGSLEEGWRSEFDRLQRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AVP4</accession>
    <name>A0A0M7AVP4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04996</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000038">
        <property type="protein sequence ID" value="CTQ77654.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04996"/>
    <dbReference type="EnsemblBacteria" id="CTQ77654">
        <property type="protein sequence ID" value="CTQ77654"/>
        <property type="gene ID" value="LAX5112_04996"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009842">
        <property type="entry name" value="DUF1402"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07182">
        <property type="entry name" value="DUF1402"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ77654.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="334" mass="38135" checksum="1988B9F69EE7DB85" modified="2015-12-09" version="1">MKRTTVVHRVTAPIAMFAVFFCLGHLLPIGSNHGLTTSAHAQSVRVVPEGNRYRSQPKIPFASSRRTSASNSSYDAKFEKVLSVLRRDRRLMSSIKRVASRYGIDPIHIVGAIVGEHTYNYDTLDSAQSYYVKAMAYAGIRFDFELNGEQVETFVERPQFDRCRKEHVQKASDRRWSCYEQVWNSRFRGKSVDGVRYPRKNFNEAFFQPLYAGQSFGLGQLSPLTVLKMTDRVARTSNFRKLKSTNPEGVYKATMDPNQSLHYMAAIIRDAIDAYKSVGKVDISKNPGLTATLYNLGDPWSRAAKFRRSGNSWPRENYYGWLVNDRIDELESLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZMH2</accession>
    <name>A0A0M6ZMH2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Aerobic cobaltochelatase subunit CobN</fullName>
            <ecNumber evidence="1">6.6.1.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">cobN_1</name>
        <name evidence="1" type="ORF">LAX5112_00128</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="6.6.1.2" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63959.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670154.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00128"/>
    <dbReference type="EnsemblBacteria" id="CTQ63959">
        <property type="protein sequence ID" value="CTQ63959"/>
        <property type="gene ID" value="LAX5112_00128"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051116">
        <property type="term" value="F:cobaltochelatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009236">
        <property type="term" value="P:cobalamin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd10150">
        <property type="entry name" value="CobN_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011953">
        <property type="entry name" value="Cobalto_CobN"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003672">
        <property type="entry name" value="CobN/Mg_chltase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44119">
        <property type="entry name" value="PTHR44119"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02514">
        <property type="entry name" value="CobN-Mg_chel"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02257">
        <property type="entry name" value="cobalto_cobN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0436">Ligase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ63959.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="1246" mass="135596" checksum="C43A29BC3C5DFDBD" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPA4</accession>
    <name>A0A0M6ZPA4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00146</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64006.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670167.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00146"/>
    <dbReference type="EnsemblBacteria" id="CTQ64006">
        <property type="protein sequence ID" value="CTQ64006"/>
        <property type="gene ID" value="LAX5112_00146"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809176" evidence="1">
        <location>
            <begin position="24"/>
            <end position="293"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64006.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="293" mass="32886" checksum="494962944894D8B0" modified="2015-12-09" version="1">MTIPKCGIIGLMATLFFAGPAAADQPIEIRLPQLASIPEYTVPLLELALSKQDRPFKIVLPENSKDLTAVEVMEKLTDPASSEFNLYAAGTSKHYEEIALPIRVPLVRGLIGARINAIPKGSQNKFLSVNTVGDLKDMTFLQGIDWGDIIILEGAGLTVKTARKSQLYPMIAAADADAYPRASVEILSERMEYVQLDYDIEQEVVLIYDRFPFYFFTGKHNAELAEIIETGLVTAYEDGSFIQYFRTHPMIREIFTELNLDSRRPIRFDNPNLTAETASLPDYYWHKFPGEAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPR8</accession>
    <name>A0A0M6ZPR8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 8">Flagellar motor switch protein FliN</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">fliN_1</name>
        <name evidence="10" type="ORF">LAX5112_00185</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cell membrane</location>
            <topology evidence="8">Peripheral membrane protein</topology>
            <orientation evidence="8">Cytoplasmic side</orientation>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="8">Bacterial flagellum basal body</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
            <orientation evidence="1">Cytoplasmic side</orientation>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the FliN/MopA/SpaO family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64120.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670192.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00185"/>
    <dbReference type="EnsemblBacteria" id="CTQ64120">
        <property type="protein sequence ID" value="CTQ64120"/>
        <property type="gene ID" value="LAX5112_00185"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009425">
        <property type="term" value="C:bacterial-type flagellum basal body"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003774">
        <property type="term" value="F:cytoskeletal motor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071973">
        <property type="term" value="P:bacterial-type flagellum-dependent cell motility"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006935">
        <property type="term" value="P:chemotaxis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.330.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012826">
        <property type="entry name" value="FliN"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001543">
        <property type="entry name" value="FliN-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001172">
        <property type="entry name" value="FliN_T3SS_HrcQb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036429">
        <property type="entry name" value="SpoA-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01052">
        <property type="entry name" value="FliMN_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00956">
        <property type="entry name" value="FLGMOTORFLIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101801">
        <property type="entry name" value="SSF101801"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02480">
        <property type="entry name" value="fliN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0975">Bacterial flagellum</keyword>
    <keyword evidence="4 8" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="10" id="KW-0966">Cell projection</keyword>
    <keyword evidence="5 8" id="KW-0145">Chemotaxis</keyword>
    <keyword evidence="10" id="KW-0969">Cilium</keyword>
    <keyword evidence="6 8" id="KW-0283">Flagellar rotation</keyword>
    <keyword evidence="10" id="KW-0282">Flagellum</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FliMN_C" evidence="9">
        <location>
            <begin position="49"/>
            <end position="121"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004287"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009226"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00021897"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022500"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022779"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU362074"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF01052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ64120.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="130" mass="13736" checksum="FF52976271BE7279" modified="2015-12-09" version="1">MSDTIVENVDVETGATIKTADAANFARVEAPDKKNAGDTMGDDRNLDTILGIPVNIQVVLGSATMLVSNLLKLGRGAVIPLNHRVGEPIDIVVNGRVIARGEVVVVEDDNSRFGVSLTEIISSQTSPLEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQ68</accession>
    <name>A0A0M6ZQ68_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00235</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64260.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670228.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ64260">
        <property type="protein sequence ID" value="CTQ64260"/>
        <property type="gene ID" value="LAX5112_00235"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809001" evidence="1">
        <location>
            <begin position="25"/>
            <end position="144"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64260.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="144" mass="16484" checksum="E268C355AE9C1204" modified="2015-12-09" version="1">MTRAQCIAILTFLPAITLAGSSFAQSDYYIRSQYPDGTFTGSHEILIRPKEGYYQAQYCDRMFWVSTTTVVWTEEEVAAGRTLILEENFGEERNVLCSDNTAFASLYDLGLDKREIEALREPEGSFQTRASRIHTIRDAFKQFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQJ6</accession>
    <name>A0A0M6ZQJ6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Xanthine dehydrogenase molybdenum-binding subunit</fullName>
            <ecNumber evidence="2">1.17.1.4</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">xdhA</name>
        <name evidence="2" type="ORF">LAX5112_00304</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.17.1.4" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64456.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00304"/>
    <dbReference type="EnsemblBacteria" id="CTQ64456">
        <property type="protein sequence ID" value="CTQ64456"/>
        <property type="gene ID" value="LAX5112_00304"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030151">
        <property type="term" value="F:molybdenum ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004854">
        <property type="term" value="F:xanthine dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000674">
        <property type="entry name" value="Ald_Oxase/Xan_DH_a/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036856">
        <property type="entry name" value="Ald_Oxase/Xan_DH_a/b_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016208">
        <property type="entry name" value="Ald_Oxase/xanthine_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008274">
        <property type="entry name" value="AldOxase/xan_DH_Mopterin-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037165">
        <property type="entry name" value="AldOxase/xan_DH_Mopterin-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014309">
        <property type="entry name" value="Xanthine_DH_Mopterin-bd_su"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11908">
        <property type="entry name" value="PTHR11908"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01315">
        <property type="entry name" value="Ald_Xan_dh_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02738">
        <property type="entry name" value="Ald_Xan_dh_C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01008">
        <property type="entry name" value="Ald_Xan_dh_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54665">
        <property type="entry name" value="SSF54665"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56003">
        <property type="entry name" value="SSF56003"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02965">
        <property type="entry name" value="xanthine_xdhB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ald_Xan_dh_C" evidence="1">
        <location>
            <begin position="31"/>
            <end position="139"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM01008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64456.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="779" mass="84101" checksum="79096BC7DA28216B" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQQ7</accession>
    <name>A0A0M6ZQQ7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Inner membrane protein YgaZ</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">ygaZ</name>
        <name evidence="9" type="ORF">LAX5112_00362</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the AzlC family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64677.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451511.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00362"/>
    <dbReference type="EnsemblBacteria" id="CTQ64677">
        <property type="protein sequence ID" value="CTQ64677"/>
        <property type="gene ID" value="LAX5112_00362"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011606">
        <property type="entry name" value="Brnchd-chn_aa_trnsp_permease"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34979">
        <property type="entry name" value="PTHR34979"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03591">
        <property type="entry name" value="AzlC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="16"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="49"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="74"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="136"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="170"/>
            <end position="188"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010735"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ64677.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="233" mass="24939" checksum="CB9CA3B06DB39EDF" modified="2015-12-09" version="1">MLERNVTLSFKGCVQGALLCLPGFPGVVALGVVFGTVAAQKGLTFLETIMINSLVFAGASQFVAMEVYSDPLTWGTLIAMVGVTAAVNMRMLLIGASLRPWLGQVPAYKTYPALYFLTDLNWLISLSEYEKGTRDWGVYLGSGLFTWTVWSLSVIPGYFAGSLISDPKAFGLDVILPAFFAALLVPLWKGKRQTVSWLVAGAVATTTWALVGGYWSIFTGAIAGALAGAYLDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQX0</accession>
    <name>A0A0M6ZQX0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">N-acetyltransferase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00074</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63813.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670123.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00074"/>
    <dbReference type="EnsemblBacteria" id="CTQ63813">
        <property type="protein sequence ID" value="CTQ63813"/>
        <property type="gene ID" value="LAX5112_00074"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041496">
        <property type="entry name" value="YitH_GNAT"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13673">
        <property type="entry name" value="Acetyltransf_10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18014">
        <property type="entry name" value="Acetyltransf_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="5"/>
            <end position="142"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ63813.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="283" mass="31436" checksum="19319579A2B9CFD8" modified="2015-12-09" version="1">MAVQLNIRNLNAEDIQTAIDWAAHEGWNPGHEDGLTFLEADRSGFFAGEIDGELVTVISGVRYGDGFGFIGLFITHPDHRAKGHGQLIWDHAMTYLDGRTVGLDAVKEQTPRYAKHGFKPVYRNVRYAGISACDTPMDARLTPLGQGLFPSIRDYDRPFFPDERTEFLRLWTAPTSKTRRGFAFVENGEVQGFGILRQCLEGFKIGPLFADTPEIADALFCTLAGQVKGQPLILDIPEPNAAALLLAEKHEMSPEFETFRMYKGPAPDLPLDQTFGITTFELG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQX2</accession>
    <name>A0A0M6ZQX2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">DNA-3-methyladenine glycosylase 1</fullName>
            <ecNumber evidence="1">3.2.2.20</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">tag</name>
        <name evidence="1" type="ORF">LAX5112_00328</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.2.2.20" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64586.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670328.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00328"/>
    <dbReference type="EnsemblBacteria" id="CTQ64586">
        <property type="protein sequence ID" value="CTQ64586"/>
        <property type="gene ID" value="LAX5112_00328"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008725">
        <property type="term" value="F:DNA-3-methyladenine glycosylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006284">
        <property type="term" value="P:base-excision repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005019">
        <property type="entry name" value="Adenine_glyco"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011257">
        <property type="entry name" value="DNA_glycosylase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03352">
        <property type="entry name" value="Adenine_glyco"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48150">
        <property type="entry name" value="SSF48150"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ64586.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="222" mass="25537" checksum="A1D843091E3A5F45" modified="2015-12-09" version="1">MVEAGQTIKAERDPETGLLPGADGKQRCWWHGNLPDYLHYHDTEWGWPVDDDRRLFEKICLEGFQSGLSWLTILRKREGFRAAFANFEFEDVANFTEADVEWCLGDAGIVRHRKKIESTINNAKRAIELKKEFGSLAAYFWSYEPKSENRPSEITFAVAKTLGKTEESTALSKDLKKRGWSFVGPTTVYAFMQSMGMVNDHLEGCCCREPVEEARRTFKRPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZR04</accession>
    <name>A0A0M6ZR04_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00091</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63853.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ63853">
        <property type="protein sequence ID" value="CTQ63853"/>
        <property type="gene ID" value="LAX5112_00091"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ63853.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="92" mass="10610" checksum="501F1CA20D6775CE" modified="2015-12-09" version="1">MARFPHYRSNVVALGQLLAHARTDKEKRQKLIQNPKDELRKIGLPEHTVQLMDFEIVDATQAKTTVLPYRLNQKKIDKADPGYLVPLARQFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSK4</accession>
    <name>A0A0M6ZSK4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">HTH merR-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00502</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65080.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670453.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ65080">
        <property type="protein sequence ID" value="CTQ65080"/>
        <property type="gene ID" value="LAX5112_00502"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009061">
        <property type="entry name" value="DNA-bd_dom_put_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000551">
        <property type="entry name" value="MerR-type_HTH_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13411">
        <property type="entry name" value="MerR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46955">
        <property type="entry name" value="SSF46955"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH merR-type" evidence="1">
        <location>
            <begin position="12"/>
            <end position="82"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13411"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65080.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="195" mass="22345" checksum="16686DF837646711" modified="2015-12-09" version="1">MSDRVDIEIPEYTQADVIRITAVSAKTLQNWTDPNRGILRLSQDSVGKGRRRLYSALDIMAVTMIAHLSALGVSPNLVSQLFYEREAKVSDWFKSAFEDPDKEYICRIFFDADGLFARLIASSEDNDRFVYEDDWADQRFAFIQVSLTRIASFVVFGIRDIRFEETPEDQKTEAEKAIYTASKELLGDRKKAKLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSZ5</accession>
    <name>A0A0M6ZSZ5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Acyl-coenzyme A thioesterase PaaI</fullName>
            <ecNumber evidence="2">3.1.2.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">paaI</name>
        <name evidence="2" type="ORF">LAX5112_00791</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.2.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65885.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670710.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00791"/>
    <dbReference type="EnsemblBacteria" id="CTQ65885">
        <property type="protein sequence ID" value="CTQ65885"/>
        <property type="gene ID" value="LAX5112_00791"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016790">
        <property type="term" value="F:thiolester hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029069">
        <property type="entry name" value="HotDog_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011973">
        <property type="entry name" value="PaaD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003736">
        <property type="entry name" value="PAAI_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006683">
        <property type="entry name" value="Thioestr_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03061">
        <property type="entry name" value="4HBT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54637">
        <property type="entry name" value="SSF54637"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02286">
        <property type="entry name" value="PaaD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00369">
        <property type="entry name" value="unchar_dom_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="4HBT" evidence="1">
        <location>
            <begin position="56"/>
            <end position="131"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03061"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65885.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="148" mass="16111" checksum="694AB77CBDD9ABF8" modified="2015-12-09" version="1">MKKTSELNPKELAETCAKLMWEEDNASQKLGMKLLHIAPGEADISMTVTQDMTNGHGNCHGGYIFALADSAFAFACNTYNQVTVAQHCSVTYIAPGSLNDLLIASAREVSRTGRSGIYDIRVARGDGTVIAEFRGHSRTINRTFLPTE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZT16</accession>
    <name>A0A0M6ZT16_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Iron(3+)-hydroxamate import ATP-binding protein FhuC</fullName>
            <ecNumber evidence="6">3.6.3.34</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">fhuC</name>
        <name evidence="6" type="ORF">LAX5112_00633</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.34" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65457.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670588.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00633"/>
    <dbReference type="EnsemblBacteria" id="CTQ65457">
        <property type="protein sequence ID" value="CTQ65457"/>
        <property type="gene ID" value="LAX5112_00633"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="6"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="40"/>
            <end position="47"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ65457.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="264" mass="28918" checksum="A93829B1729C8A79" modified="2015-12-09" version="1">MTAATLTAKDLSWSPKHHGDILLRSTSFHLEAGRVLGIVGPNGAGKTTLLRLLYRFYRPVTGQVLVDGEDIWSLSARETAQRIAAVLQEQPSDFALTVGEIVALGRTPHRRGFAGTTGSHDRDIIETALDRLDLHGLAGRQLGTLSGGERQRVMVARALAQEPRLLILDEPTNHLDIRHQLEVLDLIRSLPLTIVTSLHDLNLASGLCDDVVLLQSGHQLGFGSPSHVLTETAVSGAFQVDARRERLTPSNNDHLTFHIQKQRI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="31" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTG5</accession>
    <name>A0A0M6ZTG5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="13">Copper-transporting P-type ATPase</fullName>
            <ecNumber evidence="13">3.6.3.4</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">actP_1</name>
        <name evidence="13" type="ORF">LAX5112_00659</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="11">Cell membrane</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 11">Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IB subfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.4" evidence="13"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65511.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670609.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00659"/>
    <dbReference type="EnsemblBacteria" id="CTQ65511">
        <property type="protein sequence ID" value="CTQ65511"/>
        <property type="gene ID" value="LAX5112_00659"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019829">
        <property type="term" value="F:ATPase-coupled cation transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005507">
        <property type="term" value="F:copper ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006825">
        <property type="term" value="P:copper ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00371">
        <property type="entry name" value="HMA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1110.10">
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
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        <property type="entry name" value="ATPase_P-typ_cyto_dom_N"/>
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        <property type="entry name" value="ATPase_P-typ_P_site"/>
    </dbReference>
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        <property type="entry name" value="ATPase_P-typ_TM_dom_sf"/>
    </dbReference>
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        <property type="entry name" value="ATPase_P-typ_transduc_dom_A_sf"/>
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        <property type="entry name" value="HAD-like_sf"/>
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        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017969">
        <property type="entry name" value="Heavy-metal-associated_CS"/>
    </dbReference>
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        <property type="entry name" value="HMA_Cu_ion-bd"/>
    </dbReference>
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        <property type="entry name" value="HMA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036163">
        <property type="entry name" value="HMA_dom_sf"/>
    </dbReference>
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        <property type="entry name" value="P-typ_ATPase_IB"/>
    </dbReference>
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        <property type="entry name" value="P_typ_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044492">
        <property type="entry name" value="P_typ_ATPase_HD_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00403">
        <property type="entry name" value="HMA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDF00027">
        <property type="entry name" value="p-type_atpase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55008">
        <property type="entry name" value="SSF55008"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="SSF81653"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81665">
        <property type="entry name" value="SSF81665"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01525">
        <property type="entry name" value="ATPase-IB_hvy"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01494">
        <property type="entry name" value="ATPase_P-type"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00003">
        <property type="entry name" value="TIGR00003"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00154">
        <property type="entry name" value="ATPASE_E1_E2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01047">
        <property type="entry name" value="HMA_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50846">
        <property type="entry name" value="HMA_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="9" id="KW-0186">Copper</keyword>
    <keyword evidence="6" id="KW-0187">Copper transport</keyword>
    <keyword evidence="13" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-0406">Ion transport</keyword>
    <keyword evidence="10 11" id="KW-0472">Membrane</keyword>
    <keyword evidence="4 11" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="11" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="7" id="KW-1278">Translocase</keyword>
    <keyword evidence="3 11" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8 11" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="166"/>
            <end position="186"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="192"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="236"/>
            <end position="261"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="267"/>
            <end position="286"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="420"/>
            <end position="442"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="448"/>
            <end position="471"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="764"/>
            <end position="786"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="792"/>
            <end position="811"/>
        </location>
    </feature>
    <feature type="domain" description="HMA" evidence="12">
        <location>
            <begin position="10"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="domain" description="HMA" evidence="12">
        <location>
            <begin position="77"/>
            <end position="140"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006024"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022796"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023008"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU362081"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50846"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="CTQ65511.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="839" mass="87010" checksum="DBBEF4842873CC73" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTI3</accession>
    <name>A0A0M6ZTI3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Sulfate transport system permease protein CysW</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">cysW_1</name>
        <name evidence="7" type="ORF">LAX5112_00864</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
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        <property type="protein sequence ID" value="CTQ66085.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008194786.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00864"/>
    <dbReference type="EnsemblBacteria" id="CTQ66085">
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        <property type="gene ID" value="LAX5112_00864"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
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        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
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        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="33"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="61"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="97"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="154"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="201"/>
            <end position="222"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="26"/>
            <end position="222"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ66085.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="235" mass="24515" checksum="BF1AA65F60FD6D5E" modified="2015-12-09" version="1">MDSFWNVLASAIGLVFAFDPDLMEIVGLSMQVTLSAVAIACLIGFPLGAIAGAFRFPGRTLLSIVLNALMGLPPVVVGLLVYLMLSASGPLGPLGLLYTPTAMIIAQTVLVTPIVAALTKQVVEDLYREYGEQFTSLGVGPLDRVMALLWDARYSLLTVALAGFGRAVAEVGAVIIVGGNINHVTRVMTTTIALETSKGNLELALALGVILLAIAFAVNALVMTLRASAVRAAYA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTM2</accession>
    <name>A0A0M6ZTM2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Cytochrome c domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_00878</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66125.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ66125">
        <property type="protein sequence ID" value="CTQ66125"/>
        <property type="gene ID" value="LAX5112_00878"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009056">
        <property type="entry name" value="Cyt_c-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036909">
        <property type="entry name" value="Cyt_c-like_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46626">
        <property type="entry name" value="SSF46626"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51007">
        <property type="entry name" value="CYTC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 4" id="KW-0349">Heme</keyword>
    <keyword evidence="3 4" id="KW-0408">Iron</keyword>
    <keyword evidence="2 4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="5">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809095" description="Cytochrome c domain-containing protein" evidence="5">
        <location>
            <begin position="23"/>
            <end position="252"/>
        </location>
    </feature>
    <feature type="domain" description="Cytochrome c" evidence="6">
        <location>
            <begin position="143"/>
            <end position="241"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00433"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ66125.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="252" mass="27678" checksum="DE73B09EBE231236" modified="2015-12-09" version="1">MACRKLLIFIFACIWMSASVNAVRSAEPFRLSVPQDLNDSGFLKYLLPRFSLKTNTRIELVSPEDPAEVRLLDEQGGTPVFDGLDRTWYVSVEQETGGTKRFLEWLTSDVGRRTIDGFPAKDGIAFTAAAPVAKEVDDGLIAGDAGKGEKLAVVHCGRCHRVNAATRMAGIGSTPSFAILRTLADWKPRFEAFFALNPHPSFTLIEDVTEPFDEARPPPIVPVEMTLEDLDAILAFVSRIPPADLGAPLQYQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTW6</accession>
    <name>A0A0M6ZTW6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">L-lactate dehydrogenase [cytochrome]</fullName>
            <ecNumber evidence="7">1.1.2.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">lldD_2</name>
        <name evidence="7" type="ORF">LAX5112_00662</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the FMN-dependent alpha-hydroxy acid dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.1.2.3" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65520.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040452445.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00662"/>
    <dbReference type="EnsemblBacteria" id="CTQ65520">
        <property type="protein sequence ID" value="CTQ65520"/>
        <property type="gene ID" value="LAX5112_00662"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010181">
        <property type="term" value="F:FMN binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004460">
        <property type="term" value="F:L-lactate dehydrogenase (cytochrome) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd02809">
        <property type="entry name" value="alpha_hydroxyacid_oxid_FMN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012133">
        <property type="entry name" value="Alpha-hydoxy_acid_DH_FMN"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000262">
        <property type="entry name" value="FMN-dep_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037396">
        <property type="entry name" value="FMN_HAD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008259">
        <property type="entry name" value="FMN_hydac_DH_AS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01070">
        <property type="entry name" value="FMN_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000138">
        <property type="entry name" value="Al-hdrx_acd_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00557">
        <property type="entry name" value="FMN_HYDROXY_ACID_DH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51349">
        <property type="entry name" value="FMN_HYDROXY_ACID_DH_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="5" id="KW-0288">FMN</keyword>
    <keyword evidence="2 7" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FMN hydroxy acid dehydrogenase" evidence="6">
        <location>
            <begin position="1"/>
            <end position="384"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="4">
        <location>
            <position position="279"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="27"/>
        </location>
        <ligand>
            <name>glyoxylate</name>
            <dbReference type="ChEBI" id="CHEBI:36655"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="80"/>
            <end position="82"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="109"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="130"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="132"/>
        </location>
        <ligand>
            <name>glyoxylate</name>
            <dbReference type="ChEBI" id="CHEBI:36655"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="158"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="167"/>
        </location>
        <ligand>
            <name>glyoxylate</name>
            <dbReference type="ChEBI" id="CHEBI:36655"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="255"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="277"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="279"/>
        </location>
        <ligand>
            <name>glyoxylate</name>
            <dbReference type="ChEBI" id="CHEBI:36655"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="282"/>
        </location>
        <ligand>
            <name>glyoxylate</name>
            <dbReference type="ChEBI" id="CHEBI:36655"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="333"/>
            <end position="334"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00024042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR000138-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR000138-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51349"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ65520.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="385" mass="42539" checksum="191C97F076B86EAD" modified="2015-12-09" version="1">MKLSDCHNFQDFRKLAKKRLPGPIFNYIDGAADDEVTYRRNTEAYDSCDLVPNVLAGVENVDMSVEVMGQKLDMPIYCAPTALQRLFHHDGERAVARAATNYGTMFGVSSLATVTVEEIAQIANTPKMFQFYFHKDRGLNDALLERAREANFEVMALTVDTITGGNRERDLRTGFTSPPKLTLGSLMSFAMHPMWAWNFYTKPKFDMPHLSGYVSEGTNVAVSVGNYFSTMLDQSMNWKDAEELCAKWNGQFALKGIMSVEDAKRAVDIGCTGIMVSNHGGRQLDGSRSPFDQLAEIVDAVGDKIDVICEGGIQRGTHVLKALSVGAKACSGGRLYLYALAAAGQPGVERALGNLRTEIERDMKLMGITSLDQLSRENLRFRETA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUK6</accession>
    <name>A0A0M6ZUK6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00825</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65977.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670731.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ65977">
        <property type="protein sequence ID" value="CTQ65977"/>
        <property type="gene ID" value="LAX5112_00825"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="46"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65977.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="61" mass="6259" checksum="51650345DD18DCDA" modified="2015-12-09" version="1">MTAQTLNWKTAVDEVRQDPSLMLALGTGAILTAFLATVHACCLGLATPPMAALLQICSSAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUK8</accession>
    <name>A0A0M6ZUK8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Putative malonic semialdehyde reductase RutE</fullName>
            <ecNumber evidence="6">1.1.1.298</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">rutE_1</name>
        <name evidence="6" type="ORF">LAX5112_00808</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.1.1.298" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65932.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00808"/>
    <dbReference type="EnsemblBacteria" id="CTQ65932">
        <property type="protein sequence ID" value="CTQ65932"/>
        <property type="gene ID" value="LAX5112_00808"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035527">
        <property type="term" value="F:3-hydroxypropionate dehydrogenase (NADP+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd02148">
        <property type="entry name" value="RutE-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.109.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029479">
        <property type="entry name" value="Nitroreductase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000415">
        <property type="entry name" value="Nitroreductase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023936">
        <property type="entry name" value="RutE-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00881">
        <property type="entry name" value="Nitroreductase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55469">
        <property type="entry name" value="SSF55469"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="2" id="KW-0288">FMN</keyword>
    <keyword evidence="3" id="KW-0521">NADP</keyword>
    <keyword evidence="4 6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nitroreductase" evidence="5">
        <location>
            <begin position="45"/>
            <end position="188"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00881"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ65932.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="226" mass="25339" checksum="E00EE55D86122875" modified="2015-12-09" version="1">MTMAASQAPVGEALATLRAEAQDVVRSLRERITKLDDDAIDLILRQARSHYAWQDKPVTRDTLELLYEITAAGPTSMNTCPARFFFIESQAAKERLAKSLKDKNIDKMMSAPVAVIIAHDLDFWKELPFLFPHEDRRPHFEGKPEHSETTAFRNGTLQGAYFMIAARALGLDVGAMSGFSNKIVDEEFFAGTTLKSNFLCNLGYADESALFQKLPRLPFETACKFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZV35</accession>
    <name>A0A0M6ZV35_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">ABC-type thiamine transport system, periplasmic component</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_00866</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66091.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670762.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00866"/>
    <dbReference type="EnsemblBacteria" id="CTQ66091">
        <property type="protein sequence ID" value="CTQ66091"/>
        <property type="gene ID" value="LAX5112_00866"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024370">
        <property type="entry name" value="PBP_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12849">
        <property type="entry name" value="PBP_like_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809301" evidence="1">
        <location>
            <begin position="26"/>
            <end position="278"/>
        </location>
    </feature>
    <feature type="domain" description="PBP_domain" evidence="2">
        <location>
            <begin position="32"/>
            <end position="253"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF12849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ66091.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="278" mass="29510" checksum="18B6CF31A9243167" modified="2015-12-09" version="1">MIRRTFLNFIAAALLSTVVIHSAQAENPFIIVQSTTSTQNSGLFDDLLPKFTAKTGIDVRVVAVGTGQAIRNAANGDGDVLFVHSKPSEEKFVADGLGVSRADVMYNDFVIVGPANDPAGVAGTNNVAKALTKIASSKSIFASRGDDSGTHKAELRLWKASGIDPSEDSGTWYRETGSGMGATLNTGTGMGAYVMTDRATWIAFGNKGTHQIVVEGDPNMFNQYGVILVNPEAHPHVRTDIAQRFIDWLLSSEGQAAIADYQVDGQQLFFPNAGSGPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZV67</accession>
    <name>A0A0M6ZV67_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">HTH-type transcriptional activator CmpR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">cmpR_2</name>
        <name evidence="3" type="ORF">LAX5112_00609</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65414.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ65414">
        <property type="protein sequence ID" value="CTQ65414"/>
        <property type="gene ID" value="LAX5112_00609"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00039">
        <property type="entry name" value="HTHLYSR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="6"/>
            <end position="63"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ65414.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="303" mass="33132" checksum="F48116B76BB103A0" modified="2015-12-09" version="1">MAEPRHRLREMEALRALVTTGTTIGAARRLGVSQSSVSRALGQLEQRVGRTLFLRSAGKIEPTAAALRLNEQLDPLFETLALIEGAEWAQADEEPLRLIVPPTLAHNFIITRVAAFLKQNPGKNLQLDIQATDVLVSGILDLRYDLGLTSAMIQRSGVTLVPWLRSHVVCAMPKGHPLEAKEIVTPADLEGVELIEFLRRLGTRAITEQLFARSGVKPRTVAETATNMAALELVREGLGVTVLNPFPVLSVGVPNISVRPFDAHITYDTSFVLPAGRQPSELAQQFMEYIKSTTPADDYSEAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVF0</accession>
    <name>A0A0M6ZVF0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Maltose-binding periplasmic proteins/domains</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_00903</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the bacterial solute-binding protein 1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66192.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670788.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00903"/>
    <dbReference type="EnsemblBacteria" id="CTQ66192">
        <property type="protein sequence ID" value="CTQ66192"/>
        <property type="gene ID" value="LAX5112_00903"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006059">
        <property type="entry name" value="SBP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13416">
        <property type="entry name" value="SBP_bac_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0574">Periplasm</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="6">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005808990" evidence="6">
        <location>
            <begin position="26"/>
            <end position="449"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008520"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ66192.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="449" mass="48295" checksum="EFEC52EE1A4BDB43" modified="2015-12-09" version="1">MIGRSTFLTSTIAGVLALGITVAQAQTLRFWTTEEQPERLAKQEELAAAFKDKTGIEVDVIPVTESDLGTRATAAFAAGDLPDVIYHTLQYALPWAEAGILDTEAATEVLENLGTDTFAPGAVAMAAVEGGIASVPVDGWTQMVVYRKDLFDANGLAAPDSYGNILAAVEKLHNPPEMFAFVAATKVDENFMSQVLEHVLLANGVSPVGSDGFKPLDEKKTIEALEFYKAIAEASPPGDLFWKQSRELYFAGKAAMIIWSPFILDELAGLRDSAPPTISDDPTSKELASKTGIVTTLKGPSNPDGAAWGDVRYFGITNDADTDAAMQFVEFSMDDGYMSTLSIAPEGKFPIRRGTNDNPTAFVEGWSKLPVGVDRKAPLTDLYDAETISTIVSGLDTAARWGVKEGQLSLASKIINSQAINRLVREYIDGERDAAQTVARMNEELAKIQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVM5</accession>
    <name>A0A0M6ZVM5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Quinone-dependent D-lactate dehydrogenase</fullName>
            <ecNumber evidence="2">1.1.5.12</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="2">D-lactate dehydrogenase</fullName>
            <shortName evidence="2">D-LDH</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="2 6" type="primary">dld</name>
        <name evidence="6" type="ORF">LAX5112_00663</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2 3">Catalyzes the oxidation of D-lactate to pyruvate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2 3">
            <text>(R)-lactate + a quinone = a quinol + pyruvate</text>
            <dbReference type="Rhea" id="RHEA:51468"/>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
            <dbReference type="ChEBI" id="CHEBI:16004"/>
            <dbReference type="ChEBI" id="CHEBI:24646"/>
            <dbReference type="ChEBI" id="CHEBI:132124"/>
            <dbReference type="EC" id="1.1.5.12"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 3 4">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Peripheral membrane protein</topology>
            <orientation evidence="2">Cytoplasmic side</orientation>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the quinone-dependent D-lactate dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.1.5.12" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65523.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670611.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00663"/>
    <dbReference type="EnsemblBacteria" id="CTQ65523">
        <property type="protein sequence ID" value="CTQ65523"/>
        <property type="gene ID" value="LAX5112_00663"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031234">
        <property type="term" value="C:extrinsic component of cytoplasmic side of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102029">
        <property type="term" value="F:D-lactate dehydrogenase (quinone) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071949">
        <property type="term" value="F:FAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048038">
        <property type="term" value="F:quinone binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019516">
        <property type="term" value="P:lactate oxidation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022904">
        <property type="term" value="P:respiratory electron transport chain"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1370.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.43.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.465.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.610">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02092">
        <property type="entry name" value="DLDH_Dld"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016172">
        <property type="entry name" value="D-lactate_DH_C-sub1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016173">
        <property type="entry name" value="D-lactate_DH_C-sub2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012256">
        <property type="entry name" value="D_lactate_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016166">
        <property type="entry name" value="FAD-bd_PCMH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036318">
        <property type="entry name" value="FAD-bd_PCMH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016167">
        <property type="entry name" value="FAD-bd_PCMH_sub1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016169">
        <property type="entry name" value="FAD-bd_PCMH_sub2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016164">
        <property type="entry name" value="FAD-linked_Oxase-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015409">
        <property type="entry name" value="Lactate_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006094">
        <property type="entry name" value="Oxid_FAD_bind_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01565">
        <property type="entry name" value="FAD_binding_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09330">
        <property type="entry name" value="Lact-deh-memb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000101">
        <property type="entry name" value="D-lactate_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55103">
        <property type="entry name" value="SSF55103"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56176">
        <property type="entry name" value="SSF56176"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51387">
        <property type="entry name" value="FAD_PCMH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="1 2 3" id="KW-0274">FAD</keyword>
    <keyword evidence="2 3" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="2 3 6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2 3" id="KW-0874">Quinone</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FAD-binding PCMH-type" evidence="5">
        <location>
            <begin position="43"/>
            <end position="272"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2 4">
        <location>
            <begin position="77"/>
            <end position="81"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2 4">
        <location>
            <begin position="85"/>
            <end position="86"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2 4">
        <location>
            <position position="143"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2 4">
        <location>
            <position position="150"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2 4">
        <location>
            <position position="160"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="257"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2 4">
        <location>
            <position position="262"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02092"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRNR" id="PIRNR000101"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR000101-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51387"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ65523.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="568" mass="63544" checksum="288EF9FF790A2F3F" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVS7</accession>
    <name>A0A0M6ZVS7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative HTH-type transcriptional regulator/GBAA_1941/BAS1801</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00949</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66387.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670871.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ66387">
        <property type="protein sequence ID" value="CTQ66387"/>
        <property type="gene ID" value="LAX5112_00949"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000835">
        <property type="entry name" value="HTH_MarR-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01047">
        <property type="entry name" value="MarR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00598">
        <property type="entry name" value="HTHMARR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00347">
        <property type="entry name" value="HTH_MARR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50995">
        <property type="entry name" value="HTH_MARR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH marR-type" evidence="1">
        <location>
            <begin position="17"/>
            <end position="150"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66387.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="154" mass="17173" checksum="FA1B431BF64AA023" modified="2015-12-09" version="1">MPKTSKAPQETAVLKLNEFLPYRLNHLAETVSRSLSKIYADDFGIGIPEWRVVATLGEHVAMTARDIGKATSMHKTKVSRAVAALEKKGHLSRGANPDDQREQLLQLTDHGRAMYEDLVPKALGYSLQLEAALNEEQRVVLDEIFQRLHAAAEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVT9</accession>
    <name>A0A0M6ZVT9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">CENP-V/GFA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">LAX5112_00940</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the Gfa family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66361.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670864.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00940"/>
    <dbReference type="EnsemblBacteria" id="CTQ66361">
        <property type="protein sequence ID" value="CTQ66361"/>
        <property type="gene ID" value="LAX5112_00940"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016846">
        <property type="term" value="F:carbon-sulfur lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006913">
        <property type="entry name" value="CENP-V/GFA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011057">
        <property type="entry name" value="Mss4-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04828">
        <property type="entry name" value="GFA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51316">
        <property type="entry name" value="SSF51316"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51891">
        <property type="entry name" value="CENP_V_GFA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CENP-V/GFA" evidence="4">
        <location>
            <begin position="5"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="141"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="143"/>
            <end position="168"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005495"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51891"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ66361.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="168" mass="18617" checksum="A45896E0DAEA9289" modified="2015-12-09" version="1">MSETYTGGCQCGAVRFRIEGTLGEASICHCRMCQKAFGNFFAPLVDARHEDLTWTRGKPSYYASSDVVDRGFCSRCGTPLVFAYRDYPLIGLAIGAFDEPGRVPVTKQHWTRDKIPGFEKLHALPGGAEDDPEFADVIAEIDASNHQHPDHDTKEWPVAPQLSDGKDR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVU0</accession>
    <name>A0A0M6ZVU0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Putative D,D-dipeptide transport system permease protein DdpC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">ddpC_2</name>
        <name evidence="8" type="ORF">LAX5112_00685</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="6">Cell membrane</location>
            <topology evidence="6">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65583.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00685"/>
    <dbReference type="EnsemblBacteria" id="CTQ65583">
        <property type="protein sequence ID" value="CTQ65583"/>
        <property type="gene ID" value="LAX5112_00685"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025966">
        <property type="entry name" value="OppC_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12911">
        <property type="entry name" value="OppC_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="41"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="114"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="151"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="183"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="235"/>
            <end position="257"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="291"/>
            <end position="315"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="7">
        <location>
            <begin position="112"/>
            <end position="312"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ65583.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="324" mass="35677" checksum="76BD0D39FAEEE448" modified="2015-12-09" version="1">METQSPKGASARPEFTETVATSTWQRWMDSDIWHSYKSKPVIVVSSLVFVTLVLGAIFSPFLSPYTPFDPSSLNLMNGFTKPMSSNDFTGDYFFLGTDDQGRDVFSTILFGLRISLFVGLVAVLFAMTLGVILGLLSGYVGGWVDGVIMRIADIQMTFPSIMVAMLLYGIGKGLIPPDLRDEMAIWVLIISIGLSEWVQFARTVRGATMVERQKEYVQAGHLIGLKRWSIMVRHILPNVTGPILVIATISLALAIIAEATLSFLGVGAPKTQPSLGTLINVGRQYILSGEWWILLFPSLTLLALALSVNLFGDWLRDVLNPKLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZW57</accession>
    <name>A0A0M6ZW57_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">2-amino-3-ketobutyrate coenzyme A ligase</fullName>
            <shortName evidence="1">AKB ligase</shortName>
            <ecNumber evidence="1">2.3.1.29</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="1">Glycine acetyltransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="1 3" type="primary">kbl</name>
        <name evidence="3" type="ORF">LAX5112_00982</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>acetyl-CoA + glycine = (2S)-2-amino-3-oxobutanoate + CoA</text>
            <dbReference type="Rhea" id="RHEA:20736"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57288"/>
            <dbReference type="ChEBI" id="CHEBI:57305"/>
            <dbReference type="ChEBI" id="CHEBI:78948"/>
            <dbReference type="EC" id="2.3.1.29"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
        <text evidence="1">Binds 1 pyridoxal phosphate per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="1">Amino-acid degradation; L-threonine degradation via oxydo-reductase pathway; glycine from L-threonine: step 2/2.</text>
    </comment>
    <comment type="subunit">
        <text evidence="1">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="1">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.29" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66476.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670893.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00982"/>
    <dbReference type="EnsemblBacteria" id="CTQ66476">
        <property type="protein sequence ID" value="CTQ66476"/>
        <property type="gene ID" value="LAX5112_00982"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00046">
        <property type="reaction ID" value="UER00506"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008890">
        <property type="term" value="F:glycine C-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016874">
        <property type="term" value="F:ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009058">
        <property type="term" value="P:biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019518">
        <property type="term" value="P:L-threonine catabolic process to glycine"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00985">
        <property type="entry name" value="2am3keto_CoA_ligase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011282">
        <property type="entry name" value="2am3keto_CoA_ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004839">
        <property type="entry name" value="Aminotransferase_I/II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00155">
        <property type="entry name" value="Aminotran_1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01822">
        <property type="entry name" value="2am3keto_CoA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 3" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="3" id="KW-0436">Ligase</keyword>
    <keyword evidence="1" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Aminotran_1_2" evidence="2">
        <location>
            <begin position="42"/>
            <end position="383"/>
        </location>
    </feature>
    <feature type="region of interest" description="Pyridoxal phosphate binding" evidence="1">
        <location>
            <begin position="110"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="region of interest" description="Pyridoxal phosphate binding" evidence="1">
        <location>
            <begin position="238"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="region of interest" description="Pyridoxal phosphate binding; shared with dimeric partner" evidence="1">
        <location>
            <begin position="271"/>
            <end position="272"/>
        </location>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="135"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="184"/>
        </location>
        <ligand>
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="365"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="modified residue" description="N6-(pyridoxal phosphate)lysine" evidence="1">
        <location>
            <position position="241"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00985"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ66476.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="395" mass="42640" checksum="2209C7BDBFF09F23" modified="2015-12-09" version="1">MSQAFLENISATLKEIEAEGLYKCERLITSPQGGHIAVGGRDVINLCANNYLGLADHPALIEAAKNAMDPKGFGMASVRFICGTQDIHRELEQRLARFLAKDDAILFAACFDANGGLFEPLLGPEDAIISDALNHASIIDGIRLCKAKRYRYQNSDMTDLEAKLREAREAGARYIMIATDGVFSMDGYLAKLPEITALAKQYEAIVMVDDCHATGFMGPKGEGTPAHFGVDVDILTGTLGKALGGGIGGYIAGPQPVIDLLRQRARPYLFSNSLPPSIVMSGLEAIRLVEEGDELRRNLFDNARHWRAGLEALGFTLLPGEHPIIPVMLGEAKLAQAMAASLFEEGVYVSGFFFPVVPRGQARIRTQMNAALTRADLDRALDAFAKAGKTTGVLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZX54</accession>
    <name>A0A0M6ZX54_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01344</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67348.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671159.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67348">
        <property type="protein sequence ID" value="CTQ67348"/>
        <property type="gene ID" value="LAX5112_01344"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="176"/>
            <end position="198"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67348.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="333" mass="35717" checksum="000894EC11F7E5C6" modified="2015-12-09" version="1">MVSDANTNDSGSGSQIDYNTKHVYFYLPKVPAEDGEVADNIDLGAIFRLGGYCDLEQQAHKVPADEQHYYPQKHIESQGAGSDSVYQASAGSSTESSHGILMACDGHFLLKAAEKMFVETGDHHLQVNGDYEHDTTGSVNVQSGDIMKLKSGTNKTLTLNAGDKTGDMELLANNKTETVQGNRTTTTSGDNSDTTSGSDSKITWGFTKKINGGVNWTAFIEGQLVTATWGLQVYLGTLIKVYPVSEVVLAGMRFQATGLNVASVQTQVGYKALSADTFAAKVSTVLTGLVDQQIQITQATLTTQQRAVQANVDELQARQVEMDANIVGIVSFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXZ0</accession>
    <name>A0A0M6ZXZ0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Terminase small subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01239</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67157.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671075.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67157">
        <property type="protein sequence ID" value="CTQ67157"/>
        <property type="gene ID" value="LAX5112_01239"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051276">
        <property type="term" value="P:chromosome organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.1400">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038713">
        <property type="entry name" value="Terminase_Gp1_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005335">
        <property type="entry name" value="Terminase_ssu"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03592">
        <property type="entry name" value="Terminase_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67157.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="191" mass="21051" checksum="D2D3B3E4E84C9492" modified="2015-12-09" version="1">MADKALTIKQELFCLAYLKEGNASEAYRQAYDCENMKDTTIHRKAKDLLDNGKIRARVDQLNAEAVKMAVLNRSWVISRLMKVVEIGLNEDGSPAQVKQSKRKGDEAKSTEATQFNLAAATKALETLGKLRELRLFVDSKEHSGPGGGPIPTIDVNKLKGMSDKELDLLERALVQIGIVDGDPGRESQPEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYE3</accession>
    <name>A0A0M6ZYE3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Putative ABC transporter-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">LAX5112_01337</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the bacterial solute-binding protein 5 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67337.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671153.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01337"/>
    <dbReference type="EnsemblBacteria" id="CTQ67337">
        <property type="protein sequence ID" value="CTQ67337"/>
        <property type="gene ID" value="LAX5112_01337"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030288">
        <property type="term" value="C:outer membrane-bounded periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030678">
        <property type="entry name" value="Peptide/Ni-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039424">
        <property type="entry name" value="SBP_5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000914">
        <property type="entry name" value="SBP_5_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30290">
        <property type="entry name" value="PTHR30290"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00496">
        <property type="entry name" value="SBP_bac_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002741">
        <property type="entry name" value="MppA"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0574">Periplasm</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809041" evidence="4">
        <location>
            <begin position="25"/>
            <end position="628"/>
        </location>
    </feature>
    <feature type="domain" description="SBP_bac_5" evidence="5">
        <location>
            <begin position="96"/>
            <end position="504"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ67337.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="628" mass="70978" checksum="15555E1E48BFDABB" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYP1</accession>
    <name>A0A0M6ZYP1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">MlotiK1 channel</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01313</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67292.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040453197.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01313"/>
    <dbReference type="EnsemblBacteria" id="CTQ67292">
        <property type="protein sequence ID" value="CTQ67292"/>
        <property type="gene ID" value="LAX5112_01313"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00038">
        <property type="entry name" value="CAP_ED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018490">
        <property type="entry name" value="cNMP-bd-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018488">
        <property type="entry name" value="cNMP-bd_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000595">
        <property type="entry name" value="cNMP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00027">
        <property type="entry name" value="cNMP_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00100">
        <property type="entry name" value="cNMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51206">
        <property type="entry name" value="SSF51206"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00889">
        <property type="entry name" value="CNMP_BINDING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50042">
        <property type="entry name" value="CNMP_BINDING_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cyclic nucleotide-binding" evidence="1">
        <location>
            <begin position="15"/>
            <end position="134"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67292.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="152" mass="16601" checksum="C54213E054B2A260" modified="2015-12-09" version="1">MTLETEVEALRKVPLFHGIDDTKLRLLAFISDRTEFQTGERLCTQGEEGDSAFIILSGDADVLVNTPAGEKKVAQVSENSIVGEIAILCDVPRTATLVAASSMDVLMVSKDDFLKLLNEFPDISLEVMRTLAMRLERTTRDLAEARQGNSGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYV6</accession>
    <name>A0A0M6ZYV6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01405</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67507.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67507">
        <property type="protein sequence ID" value="CTQ67507"/>
        <property type="gene ID" value="LAX5112_01405"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="21"/>
            <end position="39"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67507.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="40" mass="4461" checksum="184562444B7A63DA" modified="2015-12-09" version="1">MTRDDLIREYRQHSGSWQAVVGVYALLVGAMVLSGYMMVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYX5</accession>
    <name>A0A0M6ZYX5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 9">4-hydroxy-tetrahydrodipicolinate synthase</fullName>
            <shortName evidence="9">HTPA synthase</shortName>
            <ecNumber evidence="4 9">4.3.3.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">dapA_3</name>
        <name evidence="9" type="synonym">dapA</name>
        <name evidence="11" type="ORF">LAX5112_01073</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2 9">Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 9">
            <text>L-aspartate 4-semialdehyde + pyruvate = (2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate + H(+) + H2O</text>
            <dbReference type="Rhea" id="RHEA:34171"/>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:67139"/>
            <dbReference type="ChEBI" id="CHEBI:537519"/>
            <dbReference type="EC" id="4.3.3.7"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3 9">Amino-acid biosynthesis; L-lysine biosynthesis via DAP pathway; (S)-tetrahydrodipicolinate from L-aspartate: step 3/4.</text>
    </comment>
    <comment type="subunit">
        <text evidence="9">Homotetramer; dimer of dimers.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="9 10">Belongs to the DapA family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">Was originally thought to be a dihydrodipicolinate synthase (DHDPS), catalyzing the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to dihydrodipicolinate (DHDP). However, it was shown in E.coli that the product of the enzymatic reaction is not dihydrodipicolinate but in fact (4S)-4-hydroxy-2,3,4,5-tetrahydro-(2S)-dipicolinic acid (HTPA), and that the consecutive dehydration reaction leading to DHDP is not spontaneous but catalyzed by DapB.</text>
    </comment>
    <dbReference type="EC" id="4.3.3.7" evidence="4 9"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66733.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451798.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01073"/>
    <dbReference type="EnsemblBacteria" id="CTQ66733">
        <property type="protein sequence ID" value="CTQ66733"/>
        <property type="gene ID" value="LAX5112_01073"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00034">
        <property type="reaction ID" value="UER00017"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008840">
        <property type="term" value="F:4-hydroxy-tetrahydrodipicolinate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019877">
        <property type="term" value="P:diaminopimelate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009089">
        <property type="term" value="P:lysine biosynthetic process via diaminopimelate"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd00950">
        <property type="entry name" value="DHDPS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00418">
        <property type="entry name" value="DapA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005263">
        <property type="entry name" value="DapA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002220">
        <property type="entry name" value="DapA-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020625">
        <property type="entry name" value="Schiff_base-form_aldolases_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020624">
        <property type="entry name" value="Schiff_base-form_aldolases_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12128">
        <property type="entry name" value="PTHR12128"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00701">
        <property type="entry name" value="DHDPS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001365">
        <property type="entry name" value="DHDPS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00146">
        <property type="entry name" value="DHPICSNTHASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM01130">
        <property type="entry name" value="DHDPS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00674">
        <property type="entry name" value="dapA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00665">
        <property type="entry name" value="DHDPS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00666">
        <property type="entry name" value="DHDPS_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 9" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 9" id="KW-0220">Diaminopimelate biosynthesis</keyword>
    <keyword evidence="9 10 11" id="KW-0456">Lyase</keyword>
    <keyword evidence="7 9" id="KW-0457">Lysine biosynthesis</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 9" id="KW-0704">Schiff base</keyword>
    <feature type="active site" description="Proton donor/acceptor" evidence="9">
        <location>
            <position position="132"/>
        </location>
    </feature>
    <feature type="active site" description="Schiff-base intermediate with substrate" evidence="9">
        <location>
            <position position="161"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="44"/>
        </location>
        <ligand>
            <name>pyruvate</name>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="203"/>
        </location>
        <ligand>
            <name>pyruvate</name>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
        </ligand>
    </feature>
    <feature type="site" description="Part of a proton relay during catalysis" evidence="9">
        <location>
            <position position="43"/>
        </location>
    </feature>
    <feature type="site" description="Part of a proton relay during catalysis" evidence="9">
        <location>
            <position position="106"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000594"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00003294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005120"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012086"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022915"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023154"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023270"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRNR" id="PIRNR001365"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ66733.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="292" mass="31207" checksum="E73A954D5C4854DE" modified="2015-12-09" version="1">MFKGSIPALITPFKDGALDEKRFQEFVDWQIKEGSSGLVPVGTTGESPTLGHDEHKRVIELCIEAANGRVPVIAGAGSNNTIEAIDFAQHAEKAGADALLVVTPYYNKPNQAGLKAHYKAINDAVGIPIIIYNIPGRSIIDMTPETMAELFETCENIKGVKDATADLAKVSRQRQLCGPDFIQLSGEDISALAFNAHGGVGCISVTANVAPRLCSEFQAATLAGDYTTALEYQDRLAPLHRALFLEPSPTGAKYALSLLGKIEEELRLPLVPISEGTQAEIRSALSHAGLIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZ44</accession>
    <name>A0A0M6ZZ44_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative oxidoreductase YteT</fullName>
            <ecNumber evidence="3">1.-.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yteT</name>
        <name evidence="3" type="ORF">LAX5112_01099</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.-.-.-" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66803.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670964.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01099"/>
    <dbReference type="EnsemblBacteria" id="CTQ66803">
        <property type="protein sequence ID" value="CTQ66803"/>
        <property type="gene ID" value="LAX5112_01099"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004104">
        <property type="entry name" value="Gfo/Idh/MocA-like_OxRdtase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000683">
        <property type="entry name" value="Gfo/Idh/MocA-like_OxRdtase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01408">
        <property type="entry name" value="GFO_IDH_MocA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02894">
        <property type="entry name" value="GFO_IDH_MocA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GFO_IDH_MocA" evidence="1">
        <location>
            <begin position="6"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="domain" description="GFO_IDH_MocA_C" evidence="2">
        <location>
            <begin position="145"/>
            <end position="364"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01408"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02894"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ66803.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="374" mass="41086" checksum="9BB39A7A9019013D" modified="2015-12-09" version="1">MPAKVKYGVIGCGMMGQEHLRNIALLPDTEVVVIFEPDAGMAEQAAQFAPHARLVDSVDAVLSVAELDCILIASPNHCHVPQMEEIRQKRPLPLLVEKPLFTDPKDIAALEAFKASYPAPVWVAMEYRYMPPIAALIEQAEQATGGIKMLTIREHRFPFLDKVGSWNRFNRYSGGTFVEKCCHFFDLMRLIIKSEPVRVMASAGQDANHKEELYNGETPDILDNGYVIVDFENGARAMLELCMFAEGSRYQEEVSAVGPAGKIEALVPGPGRFWPRDLGEPPVPQLIVSPRNPKGPRQIDIPVDPTILEAGDHNGSTFYQHQHFVAVVRGEKTDVEVSLEDGRKAVEMGLAAQQSARTGQAVAVVGRAVSSMAC</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0I8</accession>
    <name>A0A0M7A0I8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">30S ribosomal protein S10</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4 6" type="primary">rpsJ</name>
        <name evidence="6" type="ORF">LAX5112_01725</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Involved in the binding of tRNA to the ribosomes.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Part of the 30S ribosomal subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the universal ribosomal protein uS10 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68399.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_006936455.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01725"/>
    <dbReference type="EnsemblBacteria" id="CTQ68399">
        <property type="protein sequence ID" value="CTQ68399"/>
        <property type="gene ID" value="LAX5112_01725"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.600">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00508">
        <property type="entry name" value="Ribosomal_S10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001848">
        <property type="entry name" value="Ribosomal_S10"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018268">
        <property type="entry name" value="Ribosomal_S10_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027486">
        <property type="entry name" value="Ribosomal_S10_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036838">
        <property type="entry name" value="Ribosomal_S10_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11700">
        <property type="entry name" value="PTHR11700"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00338">
        <property type="entry name" value="Ribosomal_S10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00971">
        <property type="entry name" value="RIBOSOMALS10"/>
    </dbReference>
    <dbReference type="SMART" id="SM01403">
        <property type="entry name" value="Ribosomal_S10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54999">
        <property type="entry name" value="SSF54999"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01049">
        <property type="entry name" value="rpsJ_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00361">
        <property type="entry name" value="RIBOSOMAL_S10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4" id="KW-0689">Ribosomal protein</keyword>
    <feature type="domain" description="Ribosomal_S10" evidence="5">
        <location>
            <begin position="7"/>
            <end position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00508"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM01403"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ68399.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="102" mass="11582" checksum="74D92EF44E5E9FA5" modified="2015-12-09" version="1">MNGQNIRIRLKAFDHRILDASTKEIVNTAKRTGAQVRGPVPLPTRIEKYTVLRGPHIDKKSRDQFEMRTHKRLLDIVDPTPQTVDALMKLDLAAGVDVEIKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0T3</accession>
    <name>A0A0M7A0T3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="12">Acyl-CoA dehydrogenase</fullName>
            <ecNumber evidence="12">1.3.99.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">mmgC_2</name>
        <name evidence="12" type="ORF">LAX5112_01805</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 7 8">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the acyl-CoA dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.3.99.-" evidence="12"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68605.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671527.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01805"/>
    <dbReference type="EnsemblBacteria" id="CTQ68605">
        <property type="protein sequence ID" value="CTQ68605"/>
        <property type="gene ID" value="LAX5112_01805"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003995">
        <property type="term" value="F:acyl-CoA dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901565">
        <property type="term" value="P:organonitrogen compound catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="CDD" id="cd01156">
        <property type="entry name" value="IVD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.540.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006089">
        <property type="entry name" value="Acyl-CoA_DH_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006091">
        <property type="entry name" value="Acyl-CoA_Oxase/DH_mid-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046373">
        <property type="entry name" value="Acyl-CoA_Oxase/DH_mid-dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036250">
        <property type="entry name" value="AcylCo_DH-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009075">
        <property type="entry name" value="AcylCo_DH/oxidase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013786">
        <property type="entry name" value="AcylCoA_DH/ox_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037069">
        <property type="entry name" value="AcylCoA_DH/ox_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009100">
        <property type="entry name" value="AcylCoA_DH/oxidase_NM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034183">
        <property type="entry name" value="IVD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00441">
        <property type="entry name" value="Acyl-CoA_dh_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02770">
        <property type="entry name" value="Acyl-CoA_dh_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02771">
        <property type="entry name" value="Acyl-CoA_dh_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47203">
        <property type="entry name" value="SSF47203"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56645">
        <property type="entry name" value="SSF56645"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00072">
        <property type="entry name" value="ACYL_COA_DH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00073">
        <property type="entry name" value="ACYL_COA_DH_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7 8" id="KW-0274">FAD</keyword>
    <keyword evidence="3 8" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="8 12" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Acyl-CoA_dh_N" evidence="11">
        <location>
            <begin position="15"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="domain" description="Acyl-CoA_dh_M" evidence="10">
        <location>
            <begin position="130"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="domain" description="Acyl-CoA_dh_1" evidence="9">
        <location>
            <begin position="237"/>
            <end position="385"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="6">
        <location>
            <begin position="248"/>
            <end position="251"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="6">
        <location>
            <begin position="371"/>
            <end position="372"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="5">
        <location>
            <position position="250"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="131"/>
            <end position="140"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="140"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="164"/>
            <end position="166"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="276"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="287"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="344"/>
            <end position="348"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="373"/>
            <end position="375"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009347"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR634183-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR634183-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR634183-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU362125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF00441"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF02770"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF02771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ68605.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="390" mass="42663" checksum="92A7F9038F9E6D66" modified="2015-12-09" version="1">MIRNDFPSFNFDLGETADMLRDTVRSYSQDRIAPLAEKIDRDDWFPRELWPEMGELGLHGITVEEEWGGSGLGYLEHCIAMEEVSRASASIGLSYGAHSNLCVNQLRRWGNEDQKKRYLGKLVSGEHLGALAMSEPGAGSDVVSMKLRADKKGDKYILNGSKMWITNGPSADTMIIYAKTDMDAGPKGMTAFLVEKDFKGFSVAQKLDKLGMRGSETGELVFQDCEVPEENVLGEVGKGVNVLMSGLDYERAVLAAGAVGIMQAAMDVVIPYVHEREQFGKPIGTFQLVQGKVADMYVSMNASKAYVYAVAKACDRGETTREDAAGAILYAAENATKMALDAIQLLGGNGYINEYPTGRLLRDAKLYEIGAGTSEIRRMLIGREIFSKTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A173</accession>
    <name>A0A0M7A173_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">CysJI operon transcriptional activator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">cysL_1</name>
        <name evidence="3" type="ORF">LAX5112_01430</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67554.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671259.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01430"/>
    <dbReference type="EnsemblBacteria" id="CTQ67554">
        <property type="protein sequence ID" value="CTQ67554"/>
        <property type="gene ID" value="LAX5112_01430"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00039">
        <property type="entry name" value="HTHLYSR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="11"/>
            <end position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ67554.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="297" mass="31619" checksum="A2CB06EB41577CEA" modified="2015-12-09" version="1">MDGPNRIKNPLSLSQLRALEAVVRRGSFSAAAKEIGVSQPSISNHVHGLENRFKTRLIAKSGYSVSATPALEALLPKIRAILALTSDLESELLHQKELGAGELRIGYSTYQLAIPRISAFMARHPEITIEARALATRDILDLFDNGDIDIGFVTGREIPAGLDGELLVQTRIVIAAPADHPLASKGAVSWKDVETLPLLQRESSSGTRKMFEAAATVAGIKPKTILALGSWGSIATLIRSGIGVGIAMEAEITDRDGCVAIPIDSPSLVANHYVVWQKDMAGVAAIEAFRASLNTAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1C6</accession>
    <name>A0A0M7A1C6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Flagellin</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">flaA_1</name>
        <name evidence="6" type="ORF">LAX5112_01687</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Secreted</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="3">Bacterial flagellum</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the bacterial flagellin family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68242.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671466.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01687"/>
    <dbReference type="EnsemblBacteria" id="CTQ68242">
        <property type="protein sequence ID" value="CTQ68242"/>
        <property type="gene ID" value="LAX5112_01687"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009288">
        <property type="term" value="C:bacterial-type flagellum"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005198">
        <property type="term" value="F:structural molecule activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001492">
        <property type="entry name" value="Flagellin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046358">
        <property type="entry name" value="Flagellin_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001029">
        <property type="entry name" value="Flagellin_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42792">
        <property type="entry name" value="PTHR42792"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00700">
        <property type="entry name" value="Flagellin_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00669">
        <property type="entry name" value="Flagellin_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3" id="KW-0975">Bacterial flagellum</keyword>
    <keyword evidence="6" id="KW-0966">Cell projection</keyword>
    <keyword evidence="6" id="KW-0969">Cilium</keyword>
    <keyword evidence="6" id="KW-0282">Flagellum</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0964">Secreted</keyword>
    <feature type="domain" description="Flagellin_N" evidence="4">
        <location>
            <begin position="11"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="domain" description="Flagellin_C" evidence="5">
        <location>
            <begin position="292"/>
            <end position="376"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005709"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023143"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU362073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00669"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00700"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ68242.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="376" mass="38842" checksum="F8A10BAF1BCA1FEC" modified="2015-12-09" version="1">MSDITLTNAVRANLNTLTSTAKMMSDVQNKLATGKKVNSALDNPNSFFTAKGLENRASDLSTLLDDMGQGVQTLKAADKGISAISDLVDAAKAKANQALQTSDKVQRSKYAQEYNDLLSQMEDLAKDSGYKGKNLLSGTGNDLSLTFNEDGSSSLSISAVDYTNSSAGLGLSDIDRTATSATAQIEIAPDATTANTTLTSLGTYKAGDTLSVTNSDGEVETTITITDSTTLSGLATDIASAPSAAASTYDAATGNITLAGAGVQLNSGSEELATAGTISAFDSDSNIEAALSKLKSAQDTLRAQASTFGTNLSIVENRQDFTTDLINTLQEGAGELTLADTNTEGANLLALQTQQQLASTSLSMASQASQNVLRLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1D3</accession>
    <name>A0A0M7A1D3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01916</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68868.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671608.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ68868">
        <property type="protein sequence ID" value="CTQ68868"/>
        <property type="gene ID" value="LAX5112_01916"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809232" evidence="1">
        <location>
            <begin position="28"/>
            <end position="277"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68868.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="277" mass="30355" checksum="10FF4F2170F1A188" modified="2015-12-09" version="1">MRFLRSIVFASSILTSLVLGSLSGTHAASPLTYKIELNGKPVGQIVHEYVRHPDGGHGLKLSTQIETKSFFSKVRINSVLEEKISADGYLDAASNKLVENKKTYWTKIQRSGSSYLAFTAEMKTPEQLETEELAGLAKEVIATVVPYAGDAMTVAGILLSDKRDAPQHKRLTTDHFDTSLIGLPLYWQSNGYVLPSSLTIIDTEEMSVFKAKVKDLGDTQTSAGGENRTVRHIQLDIANAKPMEVWMVRPETGPAHFFQISGLSDGAKFKVSLTGTH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1P2</accession>
    <name>A0A0M7A1P2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Usg protein, probable subunit of phosphoribosylanthranilate isomerase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01484</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67694.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671297.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01484"/>
    <dbReference type="EnsemblBacteria" id="CTQ67694">
        <property type="protein sequence ID" value="CTQ67694"/>
        <property type="gene ID" value="LAX5112_01484"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009354">
        <property type="entry name" value="Usg"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06233">
        <property type="entry name" value="Usg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0413">Isomerase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67694.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="90" mass="10692" checksum="29171CD170F0EC94" modified="2015-12-09" version="1">MTVGSDFEKRLLGYGLLTAEILYRMPDHPRLLQSFLWQTEDLAPKFPELTRFLTFWEREIEGRIHAVRVAHQNLIEPAEFRYADGEFVMH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1P9</accession>
    <name>A0A0M7A1P9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01770</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68521.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671499.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01770"/>
    <dbReference type="EnsemblBacteria" id="CTQ68521">
        <property type="protein sequence ID" value="CTQ68521"/>
        <property type="gene ID" value="LAX5112_01770"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809074" evidence="1">
        <location>
            <begin position="25"/>
            <end position="99"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68521.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="99" mass="11078" checksum="EBA826657C060750" modified="2015-12-09" version="1">MKLSVLLIPAAVLSLLTAANVAEARPDLRQMTCAQAQNMVHKTGAVVFTTGQYTYSRFVANLRYCDREKVLAPQYSATRDNPQCYVAYECKDPDLLFID</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4E5</accession>
    <name>A0A0M7A4E5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Chaperonin GroEL</fullName>
            <ecNumber evidence="7">5.6.1.7</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">60 kDa chaperonin</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">Chaperonin-60</fullName>
            <shortName evidence="7">Cpn60</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7 10" type="primary">groL</name>
        <name evidence="7" type="synonym">groEL</name>
        <name evidence="10" type="ORF">LAX5112_02307</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7 9">Together with its co-chaperonin GroES, plays an essential role in assisting protein folding. The GroEL-GroES system forms a nano-cage that allows encapsulation of the non-native substrate proteins and provides a physical environment optimized to promote and accelerate protein folding.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7 9">Forms a cylinder of 14 subunits composed of two heptameric rings stacked back-to-back. Interacts with the co-chaperonin GroES.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 7 8">Belongs to the chaperonin (HSP60) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="5.6.1.7" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ69975.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451536.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02307"/>
    <dbReference type="EnsemblBacteria" id="CTQ69975">
        <property type="protein sequence ID" value="CTQ69975"/>
        <property type="gene ID" value="LAX5112_02307"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140662">
        <property type="term" value="F:ATP-dependent protein folding chaperone"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051082">
        <property type="term" value="F:unfolded protein binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042026">
        <property type="term" value="P:protein refolding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd03344">
        <property type="entry name" value="GroEL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.560.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.260.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.7.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00600">
        <property type="entry name" value="CH60"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018370">
        <property type="entry name" value="Chaperonin_Cpn60_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001844">
        <property type="entry name" value="Cpn60/GroEL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002423">
        <property type="entry name" value="Cpn60/GroEL/TCP-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027409">
        <property type="entry name" value="GroEL-like_apical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027413">
        <property type="entry name" value="GROEL-like_equatorial_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027410">
        <property type="entry name" value="TCP-1-like_intermed_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00118">
        <property type="entry name" value="Cpn60_TCP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00298">
        <property type="entry name" value="CHAPERONIN60"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48592">
        <property type="entry name" value="SSF48592"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52029">
        <property type="entry name" value="SSF52029"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54849">
        <property type="entry name" value="SSF54849"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02348">
        <property type="entry name" value="GroEL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00296">
        <property type="entry name" value="CHAPERONINS_CPN60"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 7" id="KW-0143">Chaperone</keyword>
    <keyword evidence="2 7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 7" id="KW-0413">Isomerase</keyword>
    <keyword evidence="3 7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="30"/>
            <end position="33"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="51"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="87"/>
            <end position="91"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="415"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="496"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006607"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00600"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU000418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU000419"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ69975.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="547" mass="57408" checksum="D2F1284D5836B4B0" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4G6</accession>
    <name>A0A0M7A4G6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02143</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69517.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671798.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02143"/>
    <dbReference type="EnsemblBacteria" id="CTQ69517">
        <property type="protein sequence ID" value="CTQ69517"/>
        <property type="gene ID" value="LAX5112_02143"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021228">
        <property type="entry name" value="BrxD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10923">
        <property type="entry name" value="DUF2791"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ69517.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="435" mass="48322" checksum="610BB0E3995A9C80" modified="2015-12-09" version="1">MSRLKPRERDAIVQALRAGVVPKLGLRHIQVGRVREIEELVKDMDRIADGGSAIRFIIGEYGSGKTFFMNLIRLVALEKGLVVMFADLAPDRRIHATGGQARGLYAEMARNLSTRTKAEGGALASVVERFVSTAHRDAEARDLPTGNVIREKLAHLEELTGGFEFSEVIRRYWEGHETGDEDLKSSSLRWLRGEFATRTDARKALGVRTIVDDANVYDHLKLLSAFVVEAGYKGLLVGMDEMVNLYKLTSSQARNANYEQILRILNDVLQGSAENLGFLMGGTPEFLMNTRRGLYSYEALQSRLAENSFARDGFVDFSGPVVRLASLTPEDLFVLLANVRRVMQGEEKGLPDTALEAFMAHCSERIGEAYFRTPRNTVTAFVNLLAVLEQNPGVEWTDLIDQLVLVDDQGDDMSDIDDATGSQSVEADDLVSFRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4K6</accession>
    <name>A0A0M7A4K6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative lipoprotein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02087</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69366.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02087"/>
    <dbReference type="EnsemblBacteria" id="CTQ69366">
        <property type="protein sequence ID" value="CTQ69366"/>
        <property type="gene ID" value="LAX5112_02087"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028081">
        <property type="entry name" value="Leu-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13458">
        <property type="entry name" value="Peripla_BP_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peripla_BP_6" evidence="1">
        <location>
            <begin position="62"/>
            <end position="388"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13458"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69366.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="405" mass="41932" checksum="2BCE04519A0B0E26" modified="2015-12-09" version="1">MYETDAIVRHRRRTFLKTALAGASTLALGGCLGSSLGTMPGEQIQPGAQPQVTGETIGTGAVRVGLMLPLSSSGGNASIGTVFKNSAALALQNFPNSDVQLLVKDTGGTTEGGRAAAQQAISEGAELILGPVFAPAVSGAGSAARAAGVPVIAFSTDTSVAARGIYLLSFLPESDVKRIIGYASSQQKRSYAALLPNDSYGSVVEAAFRQEVGRTGGRIATIQRYNVSGSDTSDLVVKANALQSSLTSIDALFVPAGGPVPGLVMQTLMGLNAEIGNIKLLGSGQWDTPQVKNNPTLTGAWFAGPEDSGFRGFAQRYQQTYGAPPPRNASLVYDGVTLAAGLIRSAGPQRFQQSILTNRDGFLGIDGLFRFKPNGLNERGLAVYQVTGSGSQVVSAAPRDFRSGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4Q8</accession>
    <name>A0A0M7A4Q8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcriptional regulator SlyA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">slyA_1</name>
        <name evidence="2" type="ORF">LAX5112_02285</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69869.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008191542.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02285"/>
    <dbReference type="EnsemblBacteria" id="CTQ69869">
        <property type="protein sequence ID" value="CTQ69869"/>
        <property type="gene ID" value="LAX5112_02285"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000835">
        <property type="entry name" value="HTH_MarR-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023187">
        <property type="entry name" value="Tscrpt_reg_MarR-type_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01047">
        <property type="entry name" value="MarR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00598">
        <property type="entry name" value="HTHMARR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00347">
        <property type="entry name" value="HTH_MARR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01117">
        <property type="entry name" value="HTH_MARR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50995">
        <property type="entry name" value="HTH_MARR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH marR-type" evidence="1">
        <location>
            <begin position="7"/>
            <end position="141"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69869.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="153" mass="16947" checksum="4723D917F39DBAFC" modified="2015-12-09" version="1">MTLPPPNIGVTMLIVDLARMLRRQFEAALADVETGLTVGEARTLFYVWRMPGNRQAVLADAMYVEPMTLVGYLDSLEKSGLIRRQPDPSDKRAKLVQLTEDADPLLERISVALEGVRARALEGVMGDDRKVLETLLQNMKDSLLLLSPNGKGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5R4</accession>
    <name>A0A0M7A5R4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Cytochrome c biogenesis protein CycY</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">cycY</name>
        <name evidence="6" type="ORF">LAX5112_02256</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the thioredoxin family. DsbE subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69802.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671880.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02256"/>
    <dbReference type="EnsemblBacteria" id="CTQ69802">
        <property type="protein sequence ID" value="CTQ69802"/>
        <property type="gene ID" value="LAX5112_02256"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030288">
        <property type="term" value="C:outer membrane-bounded periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015036">
        <property type="term" value="F:disulfide oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017004">
        <property type="term" value="P:cytochrome complex assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd03010">
        <property type="entry name" value="TlpA_like_DsbE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004799">
        <property type="entry name" value="Periplasmic_diS_OxRdtase_DsbE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013740">
        <property type="entry name" value="Redoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017937">
        <property type="entry name" value="Thioredoxin_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013766">
        <property type="entry name" value="Thioredoxin_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08534">
        <property type="entry name" value="Redoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00385">
        <property type="entry name" value="dsbE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00194">
        <property type="entry name" value="THIOREDOXIN_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51352">
        <property type="entry name" value="THIOREDOXIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0201">Cytochrome c-type biogenesis</keyword>
    <keyword evidence="3" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="4" id="KW-0676">Redox-active center</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Thioredoxin" evidence="5">
        <location>
            <begin position="51"/>
            <end position="196"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007758"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022748"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ69802.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="201" mass="21868" checksum="B2DD41C492FADD99" modified="2015-12-09" version="1">MSTLENGTGSEPKKRGFPVLVLLPLIVFAALAGLFLFQLTLGDDPSKIPSALINKPAPEFSLEPLEGLSENGVPMPGFSREDLIGQVSVVNIFASWCGPCRQEHPLLAELAKLDGFQLLGINYKDKAANARRFLGTLGNPYDRIGVDDSGRTAINWGVYGVPETFIVDKTGTIRYKFIGPLDPQSYETGFLPELRKIMAEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6A9</accession>
    <name>A0A0M7A6A9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Homoserine/homoserine lactone efflux protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">rhtB_3</name>
        <name evidence="6" type="ORF">LAX5112_02571</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70675.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02571"/>
    <dbReference type="EnsemblBacteria" id="CTQ70675">
        <property type="protein sequence ID" value="CTQ70675"/>
        <property type="gene ID" value="LAX5112_02571"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006865">
        <property type="term" value="P:amino acid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001123">
        <property type="entry name" value="LeuE-type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30086">
        <property type="entry name" value="PTHR30086"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01810">
        <property type="entry name" value="LysE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006324">
        <property type="entry name" value="LeuE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="45"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="71"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="121"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="155"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="190"/>
            <end position="209"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ70675.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="214" mass="22210" checksum="4A4B3F67C8FC0B4A" modified="2015-12-09" version="1">MKIGTKMTLELYLAYVAATLIVLAIPGPTIMLVVSYALTQGRKSAAASVMGVGLGDATAAAASLLGLGALLAASATAFTVLKWVGAAYLVWLGLKMWRSRPSALGPHTVADIPAGKIFWHAYVVTALNPKGIVFFMAFLPHFIAPQAPVVPQLFLLGITFVVLGIVNAAVYAFAAAAVGQKLRSPSLLRLINRVGGGFLISAAAMTATLQRSSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6X5</accession>
    <name>A0A0M7A6X5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">6-phosphogluconate phosphatase</fullName>
            <ecNumber evidence="1">3.1.3.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yieH_1</name>
        <name evidence="1" type="ORF">LAX5112_02094</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.3.-" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69384.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671761.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02094"/>
    <dbReference type="EnsemblBacteria" id="CTQ69384">
        <property type="protein sequence ID" value="CTQ69384"/>
        <property type="gene ID" value="LAX5112_02094"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.240">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006439">
        <property type="entry name" value="HAD-SF_hydro_IA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041492">
        <property type="entry name" value="HAD_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023198">
        <property type="entry name" value="PGP-like_dom2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13419">
        <property type="entry name" value="HAD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01509">
        <property type="entry name" value="HAD-SF-IA-v3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ69384.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="219" mass="23570" checksum="E2B917D708995BD0" modified="2015-12-09" version="1">MDPKLVIFDCDGVLVDTERMVNASLAEMVTELGYPIAGPVCQQRFMGRTLENVKEMVEALTGRTLPNDWPDQVRKRDLEVFAAGVPAIAGIADVLDELDRRNVPYCVGSSGKYAKMRTTLGSSGLLPRLQGKLFSAEDCANGKPAPDVFLLAAKSMGYRPEDCTVIEDSLPGVQAARSAGMAVYAYVEDPACDREALADAGAYLFDNMAALPGLLFSKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6Z3</accession>
    <name>A0A0M7A6Z3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Putative Fe-S oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">LAX5112_02417</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70222.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02417"/>
    <dbReference type="EnsemblBacteria" id="CTQ70222">
        <property type="protein sequence ID" value="CTQ70222"/>
        <property type="gene ID" value="LAX5112_02417"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006638">
        <property type="entry name" value="Elp3/MiaB/NifB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040086">
        <property type="entry name" value="MJ0683-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007197">
        <property type="entry name" value="rSAM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43432">
        <property type="entry name" value="PTHR43432"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04055">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00029">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDG01084">
        <property type="entry name" value="Uncharacterised_Radical_SAM_Su"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00729">
        <property type="entry name" value="Elp3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51918">
        <property type="entry name" value="RADICAL_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="4" id="KW-0408">Iron</keyword>
    <keyword evidence="5" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <feature type="domain" description="Radical SAM core" evidence="7">
        <location>
            <begin position="82"/>
            <end position="319"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ70222.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="377" mass="42196" checksum="F1F18E6044E68717" modified="2015-12-09" version="1">MTLAPPIPPVSAQPEPDAADLSHMVADRRRGRAAATNLSGRFEPLSKEAFDDGWDSLDELPPLKTEVQEERARTIITRNESPDISFDRSINPYRGCEHGCIYCFARPSHAFMGLSPGLDFETRLFAKPNAAALLERELSKPGYQPKVIAIGTNTDPYQPMERSYKLMPEILEVLENCGHPVAIVTKSALVTRDIDILSRMAERNLVKVALSITTLDKKLCRAMEPRASAPQKRLAAVRTLSDAGIPTSVMMAPIIPALTDSEIENLLEAAAEHGASEAAFILLRLPLEVSELFRDWLLRERPDRYRHVMNLIRSMRGGKDYDAKWGERMRGRGPYADQIAKRFSLTAKRLGLNLRKKKLSTEHFIQPQKGGVQLDLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7B4</accession>
    <name>A0A0M7A7B4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02464</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70316.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672058.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02464"/>
    <dbReference type="EnsemblBacteria" id="CTQ70316">
        <property type="protein sequence ID" value="CTQ70316"/>
        <property type="gene ID" value="LAX5112_02464"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021829">
        <property type="entry name" value="DUF3419"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11899">
        <property type="entry name" value="DUF3419"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ70316.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="420" mass="47558" checksum="E59D8AC64D7F1B15" modified="2015-12-09" version="1">MPQSTLTASKKRLKNAVHRSDAASRDGMLERLFTFAFKGLVYPQIWEDPDVDMRALRLTPESRMVTIASGGCNVMSYLTANPAEITAVDLNRAHVALGRLKLAAAKHFPNYETFYRFFGEADEKANVAAYERFLKANLDPETIHYWEGRDLANWGRKRITLFSRDLYHHGLLGYCIGAGHLVARLYGIDPKHMVRAKSLEEQRSFFDTALAPLFDKRLVRWATSKKMSLYGLGIPPAQYDALVSGNADGNMSAVLKERLEKLACDFSMSDNYFAWQAFGRGYAPQDGGTTGKSGPLPPYLKRDHFEDIRDRAGRVRVLNRNFTEHLQSVGEDMLDAYVLLDAQDWMTDHQLNALWSEITRTARPGARVIFRTAAEPSLLPGRVADEILDRWTYKAEESLELGRQDRSSIYGGFHLYVFKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7H7</accession>
    <name>A0A0M7A7H7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Enoyl-[acyl-carrier-protein] reductase [NADH]</fullName>
            <ecNumber evidence="7">1.3.1.9</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">fabI_1</name>
        <name evidence="10" type="ORF">LAX5112_02483</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>a 2,3-saturated acyl-[ACP] + NAD(+) = a (2E)-enoyl-[ACP] + H(+) + NADH</text>
            <dbReference type="Rhea" id="RHEA:10240"/>
            <dbReference type="Rhea" id="RHEA-COMP:9925"/>
            <dbReference type="Rhea" id="RHEA-COMP:9926"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:78784"/>
            <dbReference type="ChEBI" id="CHEBI:78785"/>
            <dbReference type="EC" id="1.3.1.9"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Lipid metabolism; fatty acid biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 7">Belongs to the short-chain dehydrogenases/reductases (SDR) family. FabI subfamily.</text>
    </comment>
    <dbReference type="EC" id="1.3.1.9" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70366.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672070.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02483"/>
    <dbReference type="EnsemblBacteria" id="CTQ70366">
        <property type="protein sequence ID" value="CTQ70366"/>
        <property type="gene ID" value="LAX5112_02483"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00094"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004318">
        <property type="term" value="F:enoyl-[acyl-carrier-protein] reductase (NADH) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016631">
        <property type="term" value="F:enoyl-[acyl-carrier-protein] reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006633">
        <property type="term" value="P:fatty acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd05372">
        <property type="entry name" value="ENR_SDR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014358">
        <property type="entry name" value="Enoyl-ACP_Rdtase_NADH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43159">
        <property type="entry name" value="PTHR43159"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000094">
        <property type="entry name" value="Enoyl-ACP_rdct"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0275">Fatty acid biosynthesis</keyword>
    <keyword evidence="6 7" id="KW-0276">Fatty acid metabolism</keyword>
    <keyword evidence="7" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="6 7" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="5 7 9" id="KW-0520">NAD</keyword>
    <keyword evidence="4 7 10" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" description="Proton acceptor" evidence="8">
        <location>
            <position position="149"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="8">
        <location>
            <position position="159"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="17"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="23"/>
            <end position="24"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="44"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="68"/>
            <end position="69"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="96"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="166"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="195"/>
            <end position="199"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009233"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023160"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRNR" id="PIRNR000094"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR000094-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR000094-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ70366.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="272" mass="29401" checksum="B5598E336BFAE90A" modified="2015-12-09" version="1">MAETRGLMNGKRGLIMGLANKKSIAWGIAKSLADAGAELALTYQGDALKKRVEPLGEELGAFVAGHCDVTDTQSMDDVFKALEEKWGKIDFLVHAVAFSDKNELTGRFVDTTADNFARTMDISCYSLTAVTQRAEKLMTDGGSILTMTYYGAEKVMPHYNVMGVAKAALETSVKYLAMDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNSPLRRSVTIEEVGDSALFLLSDLGRGVTGEIQHVDCGYNIVGMKAVDAPDISVVKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7S3</accession>
    <name>A0A0M7A7S3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Peptidase_M56 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02568</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70667.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672162.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02568"/>
    <dbReference type="EnsemblBacteria" id="CTQ70667">
        <property type="protein sequence ID" value="CTQ70667"/>
        <property type="gene ID" value="LAX5112_02568"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008756">
        <property type="entry name" value="Peptidase_M56"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05569">
        <property type="entry name" value="Peptidase_M56"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="39"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="116"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="329"/>
            <end position="350"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_M56" evidence="2">
        <location>
            <begin position="17"/>
            <end position="282"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF05569"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ70667.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="384" mass="42638" checksum="668B2CD78BE217EE" modified="2015-12-09" version="1">MTLPNQIFDIYIDLNITFAITAVVWLVAKLVLERLGIKLAYSVQLGLLNGLFVITALSPGAVALYRHLLDAGVVPGAMSVNLSDMVVSQYLRGGIAIPAQDFQSLLGLRGQLSSEILSLTSVLGAGIVSVFLAGVTFFGLKLAKGFIQLNRALASCHVWRDHGRLRLLLSDTAVVPYSARGLTRNYVVLPSELLTQSEDLKLVLKHEFEHLRQGDVTWEIGLELLRPLFFWNPFFYIWKSEVERLRELACDQKVAENAQVDLKSYCMCLLRAAKAGIQKREAFLNQSRSSVAAVALIEVQDRLLRRSPSQKLRSRVEALMEQDRAKPHAGLVAMVIVPMAAVVFLTGLAIQKPADWSQDRLMLSAIINLERLETINAFGKAPYR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7S6</accession>
    <name>A0A0M7A7S6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Putative MFS-type transporter YhjX</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">yhjX_2</name>
        <name evidence="7" type="ORF">LAX5112_02451</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70290.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672049.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02451"/>
    <dbReference type="EnsemblBacteria" id="CTQ70290">
        <property type="protein sequence ID" value="CTQ70290"/>
        <property type="gene ID" value="LAX5112_02451"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="52"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="81"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="105"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="141"/>
            <end position="169"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="175"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="223"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="256"/>
            <end position="275"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="287"/>
            <end position="308"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="314"/>
            <end position="339"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="346"/>
            <end position="366"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="378"/>
            <end position="397"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="6">
        <location>
            <begin position="14"/>
            <end position="402"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ70290.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="411" mass="43326" checksum="BA715C8C1178F388" modified="2015-12-09" version="1">MSTASTSRRDGPNIPLVIACGCLIALISFGPRSAMGLFFQPMTEARDWSREIFALAIAIQNLMWGIGQPIAGMFADRFGTWKAMAIGATLYAAGLFLMVDAQSAVALHVSAGVLIGLGVAFSSFSLVLASFGRTVSPEQRSLAFGIGTASGSLGQFLFAPLGGALIAGIGWQQTLIVFMGLIALIPLLAIALKGKAAPPSSDQAVADQSLTSAMAEAFGTRGFILLTIGFFVCGFHVAFITVHLPPYIADLGLDPSWGATSIALIGLFNIVGSLASGYIGGRYSKPILLSLIYLARAVVIFGFIMLPVSPVSVLVFSALMGLLWLSTIPPTSGLVAVMFGPRYMATLFGFVFLSHQIGSFLGVWLGGKFYDETGSYDAIWWMGIALGIAAAIIHWPIQEKPVDRLAQQAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8P2</accession>
    <name>A0A0M7A8P2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">VWFA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">LAX5112_02755</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71249.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672315.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02755"/>
    <dbReference type="EnsemblBacteria" id="CTQ71249">
        <property type="protein sequence ID" value="CTQ71249"/>
        <property type="gene ID" value="LAX5112_02755"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.410">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_repeat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002035">
        <property type="entry name" value="VWF_A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036465">
        <property type="entry name" value="vWFA_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13519">
        <property type="entry name" value="VWA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="SSF48452"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53300">
        <property type="entry name" value="SSF53300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50005">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0802">TPR repeat</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="domain" description="VWFA" evidence="4">
        <location>
            <begin position="102"/>
            <end position="207"/>
        </location>
    </feature>
    <feature type="repeat" description="TPR" evidence="1">
        <location>
            <begin position="388"/>
            <end position="421"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="443"/>
            <end position="492"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="465"/>
            <end position="492"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00339"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF13519"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ71249.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="513" mass="56345" checksum="12D8E1A96937950D" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8W1</accession>
    <name>A0A0M7A8W1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6 11">Glutamyl-tRNA(Gln) amidotransferase subunit A</fullName>
            <shortName evidence="11">Glu-ADT subunit A</shortName>
            <ecNumber evidence="5 11">6.3.5.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">gatA_3</name>
        <name evidence="11" type="synonym">gatA</name>
        <name evidence="13" type="ORF">LAX5112_02640</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11">Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln).</text>
    </comment>
    <comment type="function">
        <text evidence="2">Hydrolyzes indole-3-acetamide (IAM) into indole-3-acetic acid (IAA).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 11">
            <text>ATP + H2O + L-glutamine + L-glutamyl-tRNA(Gln) = ADP + H(+) + L-glutamate + L-glutaminyl-tRNA(Gln) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:17521"/>
            <dbReference type="Rhea" id="RHEA-COMP:9681"/>
            <dbReference type="Rhea" id="RHEA-COMP:9684"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="ChEBI" id="CHEBI:78520"/>
            <dbReference type="ChEBI" id="CHEBI:78521"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.5.7"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="4 11">Heterotrimer of A, B and C subunits.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 11">Belongs to the amidase family. GatA subfamily.</text>
    </comment>
    <dbReference type="EC" id="6.3.5.7" evidence="5 11"/>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70882.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672213.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02640"/>
    <dbReference type="EnsemblBacteria" id="CTQ70882">
        <property type="protein sequence ID" value="CTQ70882"/>
        <property type="gene ID" value="LAX5112_02640"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030956">
        <property type="term" value="C:glutamyl-tRNA(Gln) amidotransferase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050567">
        <property type="term" value="F:glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1300.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00120">
        <property type="entry name" value="GatA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000120">
        <property type="entry name" value="Amidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020556">
        <property type="entry name" value="Amidase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023631">
        <property type="entry name" value="Amidase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036928">
        <property type="entry name" value="AS_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004412">
        <property type="entry name" value="GatA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11895">
        <property type="entry name" value="PTHR11895"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01425">
        <property type="entry name" value="Amidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75304">
        <property type="entry name" value="SSF75304"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00132">
        <property type="entry name" value="gatA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00571">
        <property type="entry name" value="AMIDASES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 11" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7 11 13" id="KW-0436">Ligase</keyword>
    <keyword evidence="8 11" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10 11" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="13" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Amidase" evidence="12">
        <location>
            <begin position="25"/>
            <end position="473"/>
        </location>
    </feature>
    <feature type="active site" description="Charge relay system" evidence="11">
        <location>
            <position position="79"/>
        </location>
    </feature>
    <feature type="active site" description="Charge relay system" evidence="11">
        <location>
            <position position="159"/>
        </location>
    </feature>
    <feature type="active site" description="Acyl-ester intermediate" evidence="11">
        <location>
            <position position="183"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001243"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00003871"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008069"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012739"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00014428"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00120"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF01425"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="CTQ70882.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="494" mass="52562" checksum="6F2770FB8EC96A63" modified="2015-12-09" version="1">MTDLTKLTIAEAREGLKNKDYTSTELTEAFLGNIEQANGALNAYVAVTADKAREMAKASDDTLAKGEGGALEGIPLGIKDLFGTEGVHTQACSHILDGFKPAYESTVTSNLWADGAVMLGKLNMDEFAMGSSNETSYYGDVINPWRKTGSNQDLVPGGSSGGSASAVAARMCMGATATDTGGSIRQPAAFTGTVGIKPTYGRCSRWGIVAFASSLDQAGPIAHSVRDSAILLKSMASVDPKDTTSVDIEVPDYEAAIGKSVKGLKIGIPAEYRLDGMPGEIDELWQQGIAWLKDAGAEIVDIAMPHTKYALPAYYIVAPAEASSNLARYDGVRYGLRVPGKDIVEMYENTRAEGFGDEVKRRILIGTYVLSAGYYDAYYLKAQKVRTLIKRDFDLAWANGVDAILTPATPSAAFGVADQDLHSDPVKMYLNDIFTVTVNMAGLPGISVPAGLSSEGLPLGLQLIGKPFDESTLFQVGQVIEDAAGSFEPEKWWG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A943</accession>
    <name>A0A0M7A943_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Killing trait</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02672</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70972.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70972">
        <property type="protein sequence ID" value="CTQ70972"/>
        <property type="gene ID" value="LAX5112_02672"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021070">
        <property type="entry name" value="Killing_trait_RebB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11747">
        <property type="entry name" value="RebB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ70972.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="122" mass="12668" checksum="8C2BCFC0F7993BED" modified="2015-12-09" version="1">MPSKSQAQPEQPADVPLNTLEADMETLSKIGEAANLNDLVLGVSPAVAVASLYVSNANSLSILYENAVATQQQQTQLAQSALKAGIAQLHKVTESSSAATAAAENPDQDLLDLLKAVKNAVQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A973</accession>
    <name>A0A0M7A973_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02741</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71167.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672290.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ71167">
        <property type="protein sequence ID" value="CTQ71167"/>
        <property type="gene ID" value="LAX5112_02741"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ71167.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="179" mass="19334" checksum="43C64B8C8CCAD22C" modified="2015-12-09" version="1">MVHLTKLALLSLIGAWTLVGIDVTKAQVSPEAEAGWQSDVEGLRHFNGLRCPDVIGAFYRIKVMEGDGSSLAGCIYTGRDGITAVLRMHLQGSGRREAVSFSRSYKAAGFESILLSGPAETGISFKTGTRDNATQCETFWHFAGAKADFTLWMAYTLPTQEIDIGPAIASFTEALARQN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAB6</accession>
    <name>A0A0M7AAB6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Endoribonuclease YbeY</fullName>
            <ecNumber evidence="7">3.1.-.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7 9" type="primary">ybeY</name>
        <name evidence="9" type="ORF">LAX5112_02793</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="7">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="7">Binds 1 zinc ion.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 7">Belongs to the endoribonuclease YbeY family.</text>
    </comment>
    <dbReference type="EC" id="3.1.-.-" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71356.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02793"/>
    <dbReference type="EnsemblBacteria" id="CTQ71356">
        <property type="protein sequence ID" value="CTQ71356"/>
        <property type="gene ID" value="LAX5112_02793"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004521">
        <property type="term" value="F:endoribonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004222">
        <property type="term" value="F:metalloendopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006364">
        <property type="term" value="P:rRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.390.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00009">
        <property type="entry name" value="Endoribonucl_YbeY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023091">
        <property type="entry name" value="MetalPrtase_cat_dom_sf_prd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002036">
        <property type="entry name" value="YbeY"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46986">
        <property type="entry name" value="PTHR46986"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02130">
        <property type="entry name" value="YbeY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00043">
        <property type="entry name" value="TIGR00043"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 7" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="5 7 9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3 7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2 7" id="KW-0540">Nuclease</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0690">Ribosome biogenesis</keyword>
    <keyword evidence="7" id="KW-0698">rRNA processing</keyword>
    <keyword evidence="6 7" id="KW-0862">Zinc</keyword>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="159"/>
            <end position="195"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="166"/>
            <end position="195"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="127"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <note>catalytic</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="131"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <note>catalytic</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="137"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <note>catalytic</note>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010875"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022759"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00009"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ71356.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="195" mass="21492" checksum="E992C1EBF91C1BA3" modified="2015-12-09" version="1">MTEVEHASEGVLIDIAVEAGDWPDETALIKLAQTAIAAALKGADLEVLEEAEVSLLFTNDEGIQKLNHQWRDKDKPTNVLSFPGNDPQDDVYGPLLGDIVFAYETVAKEAEELGIEFNNHLTHLTVHGLLHLFDYDHQEKDEAELMESLETAILAGLGIDDPYAGRPLEADGDKRDSRGYDPLLQGPETIDDERS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAP6</accession>
    <name>A0A0M7AAP6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Magnesium-chelatase 60 kDa subunit</fullName>
            <ecNumber evidence="4">6.6.1.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">bchD</name>
        <name evidence="4" type="ORF">LAX5112_02979</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the Mg-chelatase subunits D/I family.</text>
    </comment>
    <dbReference type="EC" id="6.6.1.1" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71939.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672483.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02979"/>
    <dbReference type="EnsemblBacteria" id="CTQ71939">
        <property type="protein sequence ID" value="CTQ71939"/>
        <property type="gene ID" value="LAX5112_02979"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016851">
        <property type="term" value="F:magnesium chelatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd01451">
        <property type="entry name" value="vWA_Magnesium_chelatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.410">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041702">
        <property type="entry name" value="BchD/ChlD_VWA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041628">
        <property type="entry name" value="ChlI/MoxR_AAA_lid"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002035">
        <property type="entry name" value="VWF_A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036465">
        <property type="entry name" value="vWFA_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17863">
        <property type="entry name" value="AAA_lid_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00092">
        <property type="entry name" value="VWA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00327">
        <property type="entry name" value="VWA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53300">
        <property type="entry name" value="SSF53300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50234">
        <property type="entry name" value="VWFA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0436">Ligase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="VWFA" evidence="3">
        <location>
            <begin position="439"/>
            <end position="619"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="274"/>
            <end position="315"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="337"/>
            <end position="380"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="274"/>
            <end position="296"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005799"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50234"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ71939.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="624" mass="66492" checksum="F5FA593839D066BC" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AB22</accession>
    <name>A0A0M7AB22_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">4-chlorobenzoyl coenzyme A dehalogenase-2</fullName>
            <ecNumber evidence="2">3.8.1.7</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">fcbB2</name>
        <name evidence="2" type="ORF">LAX5112_02884</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the enoyl-CoA hydratase/isomerase family.</text>
    </comment>
    <dbReference type="EC" id="3.8.1.7" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71616.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672400.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02884"/>
    <dbReference type="EnsemblBacteria" id="CTQ71616">
        <property type="protein sequence ID" value="CTQ71616"/>
        <property type="gene ID" value="LAX5112_02884"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018787">
        <property type="term" value="F:4-chlorobenzoyl-CoA dehalogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.12.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029045">
        <property type="entry name" value="ClpP/crotonase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001753">
        <property type="entry name" value="Enoyl-CoA_hydra/iso"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014748">
        <property type="entry name" value="Enoyl-CoA_hydra_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00378">
        <property type="entry name" value="ECH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52096">
        <property type="entry name" value="SSF52096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005254"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71616.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="260" mass="27797" checksum="4DBA3B121016059A" modified="2015-12-09" version="1">MDYQTILWSHENGVAEITMNRPDNANALSARMSDELFDAACRCDAEGARAVILTGSGRMFNAGGDLQEFDDAEDKADHVTRMATILHAALSRFSHMDAPVITAVNGSAGGGGFSIAISGDIILASEKAKFVSAYTASALTPDGSSSYYLAKHIGLLRAKELMLTNRVLTAKEACEWGLVTRVVSPDDLMAEARKLAAQFAKGPTKAYGGVKRLLQTAYSEGLETQLDKESRSIAAMMKTHDGAHGIASFLAKKTPEYKGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACN1</accession>
    <name>A0A0M7ACN1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Putative small protein containing a coiled-coil domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03164</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72391.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008195307.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72391">
        <property type="protein sequence ID" value="CTQ72391"/>
        <property type="gene ID" value="LAX5112_03164"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009579">
        <property type="entry name" value="DUF1192"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06698">
        <property type="entry name" value="DUF1192"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ72391.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="65" mass="7558" checksum="28CC7810ADD78618" modified="2015-12-09" version="1">MGHFDDDIPKKQEPNVVTVGEDLSRLSEDELRDRIEALTREVNRTREALEQRSTIRNAADAFFQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACT0</accession>
    <name>A0A0M7ACT0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 10">3-oxoacyl-[acyl-carrier-protein] synthase 2</fullName>
            <ecNumber evidence="3 10">2.3.1.179</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="primary">fabF_1</name>
        <name evidence="14" type="ORF">LAX5112_03351</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Involved in the type II fatty acid elongation cycle. Catalyzes the elongation of a wide range of acyl-ACP by the addition of two carbons from malonyl-ACP to an acyl acceptor. Can efficiently catalyze the conversion of palmitoleoyl-ACP (cis-hexadec-9-enoyl-ACP) to cis-vaccenoyl-ACP (cis-octadec-11-enoyl-ACP), an essential step in the thermal regulation of fatty acid composition.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>(9Z)-hexadecenoyl-[ACP] + H(+) + malonyl-[ACP] = 3-oxo-(11Z)-octadecenoyl-[ACP] + CO2 + holo-[ACP]</text>
            <dbReference type="Rhea" id="RHEA:55040"/>
            <dbReference type="Rhea" id="RHEA-COMP:9623"/>
            <dbReference type="Rhea" id="RHEA-COMP:9685"/>
            <dbReference type="Rhea" id="RHEA-COMP:10800"/>
            <dbReference type="Rhea" id="RHEA-COMP:14074"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:64479"/>
            <dbReference type="ChEBI" id="CHEBI:78449"/>
            <dbReference type="ChEBI" id="CHEBI:83989"/>
            <dbReference type="ChEBI" id="CHEBI:138538"/>
            <dbReference type="EC" id="2.3.1.179"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>a fatty acyl-[ACP] + H(+) + malonyl-[ACP] = a 3-oxoacyl-[ACP] + CO2 + holo-[ACP]</text>
            <dbReference type="Rhea" id="RHEA:22836"/>
            <dbReference type="Rhea" id="RHEA-COMP:9623"/>
            <dbReference type="Rhea" id="RHEA-COMP:9685"/>
            <dbReference type="Rhea" id="RHEA-COMP:9916"/>
            <dbReference type="Rhea" id="RHEA-COMP:14125"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:64479"/>
            <dbReference type="ChEBI" id="CHEBI:78449"/>
            <dbReference type="ChEBI" id="CHEBI:78776"/>
            <dbReference type="ChEBI" id="CHEBI:138651"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1 10">Lipid metabolism; fatty acid biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 10 12">Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.179" evidence="3 10"/>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72888.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672765.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03351"/>
    <dbReference type="EnsemblBacteria" id="CTQ72888">
        <property type="protein sequence ID" value="CTQ72888"/>
        <property type="gene ID" value="LAX5112_03351"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00094"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004315">
        <property type="term" value="F:3-oxoacyl-[acyl-carrier-protein] synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006633">
        <property type="term" value="P:fatty acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd00834">
        <property type="entry name" value="KAS_I_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.47.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017568">
        <property type="entry name" value="3-oxoacyl-ACP_synth-2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000794">
        <property type="entry name" value="Beta-ketoacyl_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018201">
        <property type="entry name" value="Ketoacyl_synth_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014031">
        <property type="entry name" value="Ketoacyl_synth_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014030">
        <property type="entry name" value="Ketoacyl_synth_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020841">
        <property type="entry name" value="PKS_Beta-ketoAc_synthase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016039">
        <property type="entry name" value="Thiolase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11712">
        <property type="entry name" value="PTHR11712"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00109">
        <property type="entry name" value="ketoacyl-synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02801">
        <property type="entry name" value="Ketoacyl-synt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000447">
        <property type="entry name" value="KAS_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00825">
        <property type="entry name" value="PKS_KS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53901">
        <property type="entry name" value="SSF53901"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03150">
        <property type="entry name" value="fabF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00606">
        <property type="entry name" value="B_KETOACYL_SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 10 14" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="8 10" id="KW-0275">Fatty acid biosynthesis</keyword>
    <keyword evidence="6" id="KW-0276">Fatty acid metabolism</keyword>
    <keyword evidence="5 10" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="7" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10 12 14" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PKS_KS" evidence="13">
        <location>
            <begin position="4"/>
            <end position="420"/>
        </location>
    </feature>
    <feature type="active site" evidence="11">
        <location>
            <position position="170"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008467"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012356"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00014657"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022832"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023160"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRNR" id="PIRNR000447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRSR" id="PIRSR000447-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU003694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="SMART" id="SM00825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="CTQ72888.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="420" mass="43512" checksum="36A3758BFA185FDD" modified="2015-12-09" version="1">MRRVVVTGLGVVSPIGTGVDGFWSRIVNGANGIRRITKFDASDLACQIAGEVPSNDEDEFGFDVDAALDAREQRRTDRFIHFALAATGEALAQAGWAPETDLQKTRTGIIIGTGVGGFPAMTGGTRLVDEKGPRRASPFLVPSFLANLAAGQVSIRHGLKGPIGAPVTACAASLQALGDAARIIRAGEADVMIAGGTEACIDRVSYAGFCAAKAMSSKRNVDPEHASRPFDKDRDGFIMGEGAGILVLEDYEHAKARGTNILVELAGYGTAADAYHVTASPPDGEGGLRAMQQALAAANLTSSDIGYVNAHSTSTPVGDAAEVASLNTVFEGRGKDLAVSSSKSMFGHLLGAAGAVEAIACVKALTTGQLPPSRNLVDPDEAMTKFELVPDKAISRQVDHVLTNGFGFGGVNASAVFSRI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADX2</accession>
    <name>A0A0M7ADX2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Homogentisate 1,2-dioxygenase</fullName>
            <ecNumber evidence="4">1.13.11.5</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">hmgA</name>
        <name evidence="4" type="ORF">LAX5112_03318</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the homogentisate dioxygenase family.</text>
    </comment>
    <dbReference type="EC" id="1.13.11.5" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72821.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672739.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03318"/>
    <dbReference type="EnsemblBacteria" id="CTQ72821">
        <property type="protein sequence ID" value="CTQ72821"/>
        <property type="gene ID" value="LAX5112_03318"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004411">
        <property type="term" value="F:homogentisate 1,2-dioxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006559">
        <property type="term" value="P:L-phenylalanine catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006570">
        <property type="term" value="P:tyrosine metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005708">
        <property type="entry name" value="Homogentis_dOase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11056">
        <property type="entry name" value="PTHR11056"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04209">
        <property type="entry name" value="HgmA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01015">
        <property type="entry name" value="hmgA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0223">Dioxygenase</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007757"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ72821.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="457" mass="51462" checksum="7EDBAB365D3DDE06" modified="2015-12-09" version="1">MNKVDQKQVSGDGGKPLSNELQYMPGFGNDFETEVLPGALPQGMNSPQKCAYGLYGEQLSGTAFTAPSHQNERTWCYRIRPSVKHTSRFQKIDLPYWKSAPNVCEDVISLGQYRWDPVPHADEGLSWLTGMRTMTTAGDVNTQVGMATHIYLATKSMEDEYFFSADSELLVVPQEGILRFYTELGIIELEPKEIAILPRGLVHRVEVVEGPARGFVCENYGQKFELPGRGPIGANCMANRRDFKTPVAWYEDKEVPSKVTVKWCGQFHETKIGHSPLDVVAWHGNYAPVKYDLRTYCPVGAILFDHPDPSIFTVLTAPSGVPGTANIDFVLFRERWMVAENTFRPPWYHKNIMSELMGNIYGQYDAKPQGFVPGGMSLHNMMLPHGPDNDAFEGASNADLKAEKLDNTMSFMFETRFPQHLTEYAAKDAPLQDNYIDCWDSLEKKFDGTPEGTWDKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEB5</accession>
    <name>A0A0M7AEB5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Septum site-determining protein MinD</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Cell division inhibitor MinD</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9" type="primary">minD_4</name>
        <name evidence="9" type="ORF">LAX5112_03389</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">ATPase required for the correct placement of the division site. Cell division inhibitors MinC and MinD act in concert to form an inhibitor capable of blocking formation of the polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Interacts with MinC and FtsZ.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the ParA family. MinD subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72971.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672793.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03389"/>
    <dbReference type="EnsemblBacteria" id="CTQ72971">
        <property type="protein sequence ID" value="CTQ72971"/>
        <property type="gene ID" value="LAX5112_03389"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002586">
        <property type="entry name" value="CobQ/CobB/MinD/ParA_Nub-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010223">
        <property type="entry name" value="MinD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025501">
        <property type="entry name" value="MinD_FleN"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01656">
        <property type="entry name" value="CbiA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF003092">
        <property type="entry name" value="MinD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01968">
        <property type="entry name" value="minD_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="9" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="9" id="KW-0132">Cell division</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CbiA" evidence="8">
        <location>
            <begin position="7"/>
            <end position="227"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010257"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011626"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00016887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00025436"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00032845"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF01656"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ72971.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="273" mass="29242" checksum="0A30285A3A0BD1B6" modified="2015-12-09" version="1">MSNATVVVVTSGKGGVGKTTTSAAIASALAKEGYQVCAIDFDVGLRNLDLIMGAERRVVFDLVNVVRGEATIKQALVRDKKLNNLFLLPASQTRDKDALTEEGVASVISELRHYFDWIVCDSPAGIERGATLAMRHADEAIIVSNPEVSSVRDCDRIIGLLDAKTEVAEKGGRMPKHLLITRYDSARAKTGEMLATDDVVDILSVPLIGVVPESKDVLKASNVGLPVTLADEASPAARAYMEATRRLLGENIPVTIPEEKKGFLGKIFKGRAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFD3</accession>
    <name>A0A0M7AFD3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03151</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72354.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72354">
        <property type="protein sequence ID" value="CTQ72354"/>
        <property type="gene ID" value="LAX5112_03151"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72354.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="155" mass="17486" checksum="C80413220BD587E1" modified="2015-12-09" version="1">MWLLAPLPSKTERVSPSNAKKPTDLTAGLSADMMCKKLAPSSALKPVLTASGFARQKTFALSPLARQLACAADSFSLLTRFLFRRFFEVTAKLHFTEDAFALHLFLERLKRLIDIIVANQNLHAFFPVFNTLRSIPQLIKTMIEARLRQTILRLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGE6</accession>
    <name>A0A0M7AGE6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Glycine betaine transporter periplasmic subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_03269</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72684.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008195388.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03269"/>
    <dbReference type="EnsemblBacteria" id="CTQ72684">
        <property type="protein sequence ID" value="CTQ72684"/>
        <property type="gene ID" value="LAX5112_03269"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007210">
        <property type="entry name" value="ABC_Gly_betaine_transp_sub-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04069">
        <property type="entry name" value="OpuAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809470" evidence="2">
        <location>
            <begin position="23"/>
            <end position="330"/>
        </location>
    </feature>
    <feature type="domain" description="OpuAC" evidence="3">
        <location>
            <begin position="27"/>
            <end position="308"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF04069"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ72684.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="330" mass="36080" checksum="1C73E53DE206752A" modified="2015-12-09" version="1">MKKLFVTVAATALVGMASSAMAEECGTVTVAEMNWASAGAIAHIDKIILENGYGCNVELVTGDTMPTFTSMNEKGEPDMAPELWINAVREPLDKAVAEGSLIIGGEILNEGGVEGFWVPTAIAEEHDIYTVAAAKERPDIFKGAEDDSKGGFFTCPTGWNCRITTGNLFRANGFDEAGFELVDPGSAAGLDGSLARANERGEGWLGYYWAPTAILGKYDMTLLDFEVEHDKEEWDKCTVVEDCPDPKPNSWVKSEVFTVVTEEFSKKAGPTMDYVKGRTWDNRTAGKVLAWMTDNQATNEDGAYYFLENFEDVWTQWVSPEVAEKVKASL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGH5</accession>
    <name>A0A0M7AGH5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03793</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74198.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673107.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03793"/>
    <dbReference type="EnsemblBacteria" id="CTQ74198">
        <property type="protein sequence ID" value="CTQ74198"/>
        <property type="gene ID" value="LAX5112_03793"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019253">
        <property type="entry name" value="DUF2244_TM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016990">
        <property type="entry name" value="UCP032162_TM"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10003">
        <property type="entry name" value="DUF2244"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF032162">
        <property type="entry name" value="UCP032162_imp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="37"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="64"/>
            <end position="82"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74198.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="173" mass="19337" checksum="4E4013316AF3C350" modified="2015-12-09" version="1">MSGNNSDQSRFDNTESEDRPFFTAVLTPYRSLGPNGFLILMFCLGLISFVAGAVFWSIGAWPVFGFFGLDMALIWLAFRLNYASARQFEEIRLSRYEILVRKVGPGKRNLEYRFNPMWVRLSVDKIEDEGVTKISLTSRGETVDLGNFLNPEDRTSFAGAMINALATAKAGGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGK3</accession>
    <name>A0A0M7AGK3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">DNA alkylation repair enzyme</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03578</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73562.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672939.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03578"/>
    <dbReference type="EnsemblBacteria" id="CTQ73562">
        <property type="protein sequence ID" value="CTQ73562"/>
        <property type="gene ID" value="LAX5112_03578"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016024">
        <property type="entry name" value="ARM-type_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014825">
        <property type="entry name" value="DNA_alkylation"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08713">
        <property type="entry name" value="DNA_alkylation"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48371">
        <property type="entry name" value="SSF48371"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ73562.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="376" mass="42711" checksum="5D0D5E05AF4F1151" modified="2015-12-09" version="1">MEPFKNKISPEFVQCLAGHLERRVDGFQKTAFEKEILSELHQLELKQRARLIADVTTKHLPEKLESRFSILRSLLHSDPENAIDRDSDENGICGWGMMPLGMIVSDSGLNDFAASFDLMKEMTKRATAEFDVRPFLAKDPEKALSIMKPWTQDPNVHVRRLVSEGTRPRLPWGMRLHRLIEDPSSTVPLLEALKDDREEYVRRSVANHLNDIAKDHPALVSDIAANWLKNATPQREKLVRHACRSLIKNGYEPALRAFGLNAPEIHLADLSIKTEQVRFGSSLSFSVALKSTATRSQDLIIDYVLHFRKANGKLAPKVFKWTKATLEPGTVHRLSRFHPIRPITTRTYYGGTQAVSLRINGQDFGYQEFDLQIPDG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGX3</accession>
    <name>A0A0M7AGX3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03681</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ73887.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ73887">
        <property type="protein sequence ID" value="CTQ73887"/>
        <property type="gene ID" value="LAX5112_03681"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ73887.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="68" mass="7847" checksum="4A26135C7115332E" modified="2015-12-09" version="1">MMSPNSSTPDQKYRHVLQPWCTYQQLIDIRPIMSCVDLIHDLDRWCKILPIVFMRICAAKTLVTPAGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AH56</accession>
    <name>A0A0M7AH56_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6 7">50S ribosomal protein L9</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7 11" type="primary">rplI</name>
        <name evidence="11" type="ORF">LAX5112_03863</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Binds to the 23S rRNA.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 7">Belongs to the bacterial ribosomal protein bL9 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74438.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673173.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03863"/>
    <dbReference type="EnsemblBacteria" id="CTQ74438">
        <property type="protein sequence ID" value="CTQ74438"/>
        <property type="gene ID" value="LAX5112_03863"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.430.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.5.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00503">
        <property type="entry name" value="Ribosomal_L9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000244">
        <property type="entry name" value="Ribosomal_L9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009027">
        <property type="entry name" value="Ribosomal_L9/RNase_H1_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020594">
        <property type="entry name" value="Ribosomal_L9_bac/chp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020069">
        <property type="entry name" value="Ribosomal_L9_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036791">
        <property type="entry name" value="Ribosomal_L9_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020070">
        <property type="entry name" value="Ribosomal_L9_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036935">
        <property type="entry name" value="Ribosomal_L9_N_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21368">
        <property type="entry name" value="PTHR21368"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03948">
        <property type="entry name" value="Ribosomal_L9_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01281">
        <property type="entry name" value="Ribosomal_L9_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55653">
        <property type="entry name" value="SSF55653"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55658">
        <property type="entry name" value="SSF55658"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00158">
        <property type="entry name" value="L9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00651">
        <property type="entry name" value="RIBOSOMAL_L9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 7" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="4 7 11" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="3 7" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="2 7" id="KW-0699">rRNA-binding</keyword>
    <feature type="domain" description="RIBOSOMAL_L9" evidence="10">
        <location>
            <begin position="13"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="149"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="8">
        <location>
            <begin position="37"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="9">
        <location>
            <begin position="164"/>
            <end position="196"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00029520"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00503"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS00651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ74438.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="196" mass="21267" checksum="54E03177A56173C7" modified="2015-12-09" version="1">MQVILLERIARLGQMGDTVKVRDGYARNFLLPQGKALRANKANLERFENERAQLEARNLERKSEAEAVASKLDGEALVMIRSAGETGQLYGSVSTRDIAEGLTAGGFSVGRGQVELRTPIKTIGLHSVVIQLHPEVEVGVSVNVARSEDEATRQAAGEDLTAPEQDVFEFEEDEEEGEGEGEEADATEEAVAEEEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHB4</accession>
    <name>A0A0M7AHB4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Copper outer membrane regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">comR_5</name>
        <name evidence="3" type="ORF">LAX5112_03404</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ73014.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672806.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ73014">
        <property type="protein sequence ID" value="CTQ73014"/>
        <property type="gene ID" value="LAX5112_03404"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023772">
        <property type="entry name" value="DNA-bd_HTH_TetR-type_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036271">
        <property type="entry name" value="Tet_transcr_reg_TetR-rel_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00440">
        <property type="entry name" value="TetR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48498">
        <property type="entry name" value="SSF48498"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01081">
        <property type="entry name" value="HTH_TETR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50977">
        <property type="entry name" value="HTH_TETR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH tetR-type" evidence="2">
        <location>
            <begin position="6"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="1">
        <location>
            <begin position="29"/>
            <end position="48"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ73014.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="207" mass="22487" checksum="07F4031E175D184A" modified="2015-12-09" version="1">MARPREFETDAALDSAMSLFWDLGYEEASLARLLKTMKITRGSFYKAFKDKNAVYLATLDRYDRQVVSSTVAFLGNPANGSGRDRILSLLTKIADMAEKDGDRLGCFLCNAMADKAAQGGEIEQRLQAMALRLEAAFQKALEDDLTRSDCEGHRAGETARGLLALYFGMRVLGRAGLAGRMARDCVTQAENLIAGFTASGGRVPAAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHN3</accession>
    <name>A0A0M7AHN3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">NADH-quinone oxidoreductase subunit H</fullName>
            <ecNumber evidence="5">7.1.1.-</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">NADH dehydrogenase I subunit H</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="5">NDH-1 subunit H</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5 7" type="primary">nuoH</name>
        <name evidence="7" type="ORF">LAX5112_03483</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>a quinone + 5 H(+)(in) + NADH = a quinol + 4 H(+)(out) + NAD(+)</text>
            <dbReference type="Rhea" id="RHEA:57888"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:24646"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:132124"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="5">NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5 6">Cell membrane</location>
            <topology evidence="5 6">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5 6">Belongs to the complex I subunit 1 family.</text>
    </comment>
    <dbReference type="EC" id="7.1.1.-" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73273.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008196096.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03483"/>
    <dbReference type="EnsemblBacteria" id="CTQ73273">
        <property type="protein sequence ID" value="CTQ73273"/>
        <property type="gene ID" value="LAX5112_03483"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016655">
        <property type="term" value="F:oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048038">
        <property type="term" value="F:quinone binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01350">
        <property type="entry name" value="NDH1_NuoH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001694">
        <property type="entry name" value="NADH_UbQ_OxRdtase_su1/FPO"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018086">
        <property type="entry name" value="NADH_UbQ_OxRdtase_su1_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11432">
        <property type="entry name" value="PTHR11432"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00146">
        <property type="entry name" value="NADHdh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00668">
        <property type="entry name" value="COMPLEX1_ND1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="5 6" id="KW-0520">NAD</keyword>
    <keyword evidence="7" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5" id="KW-0874">Quinone</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-1278">Translocase</keyword>
    <keyword evidence="2 5 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0830">Ubiquinone</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="82"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="108"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="159"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="202"/>
            <end position="220"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="257"/>
            <end position="277"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="289"/>
            <end position="307"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="327"/>
            <end position="348"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01350"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU000471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ73273.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="352" mass="39217" checksum="78ACF27F20249AA5" modified="2015-12-09" version="1">MAEFMTTYGWPFLWMVFQSVLLLVVLLVIVAYVLYADRKIWAAVQIRRGPNVVGPWGLLQSFADLLKFVLKEPVIPSGANKILFLLAPLVSVLLALAAWSVIPVDYGWVIANINVGVLFVFAVSSLEVYGVIIGGWASNSKYPFLSALRSAAQMVSYEVSIGFVIVTVLLCAGTLNLTGIVLAQETGLADMLGVPWLNILNWYWLPLFPMFVVFFVSALAETNRPPFDLAEAESELVAGFMVEYGSTPYMMFMLGEYVAICLMCALMTIFFMGGWLPPFDFAPFTWVPGVIWFILKCLLCFFMFAMVKAMVPRYRYDQLMRLGWKVFLPLSLAMVFVVATVLMITGWAPGAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHU6</accession>
    <name>A0A0M7AHU6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03452</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73184.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672855.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03452"/>
    <dbReference type="EnsemblBacteria" id="CTQ73184">
        <property type="protein sequence ID" value="CTQ73184"/>
        <property type="gene ID" value="LAX5112_03452"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.140.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010415">
        <property type="entry name" value="LpxI_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043167">
        <property type="entry name" value="LpxI_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041255">
        <property type="entry name" value="LpxI_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06230">
        <property type="entry name" value="LpxI_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17930">
        <property type="entry name" value="LpxI_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="LpxI_N" evidence="2">
        <location>
            <begin position="12"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="domain" description="LpxI_C" evidence="1">
        <location>
            <begin position="145"/>
            <end position="281"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF06230"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF17930"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ73184.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="294" mass="30415" checksum="8546DA3E985FD5DD" modified="2015-12-09" version="1">MTLAETASHAPVALIAGNGRIPLQVATALAADGRECKVVAIRGEADAATRSLASAELGWGEIGRLYAFLNKSGCRDVLLIGGVSKRPDFASILGDLGTLRRLPTIIRALAGGDDSLLTKVIGLFEVEGFRVVGIKDVAPGLLAASGVLGKTQPRDTDWQDIQLALTATRKLGELDIGQAAVAIGGRVVALEGAEGTDAMLERCADLRGSGRIRAKNKTGVLVKTAKPNQDLRVDLPTIGPRTIERADAAGLAGIAIEAGGALISDREETLAQADRAGLFVIGIDQSALSQGRAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="32" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHY0</accession>
    <name>A0A0M7AHY0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 10">Arginase</fullName>
            <ecNumber evidence="3 10">3.5.3.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">arcA</name>
        <name evidence="11" type="ORF">LAX5112_03814</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 10">
            <text>H2O + L-arginine = L-ornithine + urea</text>
            <dbReference type="Rhea" id="RHEA:20569"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16199"/>
            <dbReference type="ChEBI" id="CHEBI:32682"/>
            <dbReference type="ChEBI" id="CHEBI:46911"/>
            <dbReference type="EC" id="3.5.3.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="10">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
        <text evidence="10">Binds 2 manganese ions per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2">Nitrogen metabolism; urea cycle; L-ornithine and urea from L-arginine: step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="8 9">Belongs to the arginase family.</text>
    </comment>
    <dbReference type="EC" id="3.5.3.1" evidence="3 10"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74257.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03814"/>
    <dbReference type="EnsemblBacteria" id="CTQ74257">
        <property type="protein sequence ID" value="CTQ74257"/>
        <property type="gene ID" value="LAX5112_03814"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00158">
        <property type="reaction ID" value="UER00270"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004053">
        <property type="term" value="F:arginase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006525">
        <property type="term" value="P:arginine metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000050">
        <property type="term" value="P:urea cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd09989">
        <property type="entry name" value="Arginase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014033">
        <property type="entry name" value="Arginase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006035">
        <property type="entry name" value="Ureohydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023696">
        <property type="entry name" value="Ureohydrolase_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020855">
        <property type="entry name" value="Ureohydrolase_Mn_BS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43782">
        <property type="entry name" value="PTHR43782"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00491">
        <property type="entry name" value="Arginase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00116">
        <property type="entry name" value="ARGINASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52768">
        <property type="entry name" value="SSF52768"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01229">
        <property type="entry name" value="rocF_arginase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01053">
        <property type="entry name" value="ARGINASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51409">
        <property type="entry name" value="ARGINASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 10" id="KW-0056">Arginine metabolism</keyword>
    <keyword evidence="7 9 11" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="10" id="KW-0464">Manganese</keyword>
    <keyword evidence="6 10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000227"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012168"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00018123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022503"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00742"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU003684"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU361159"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ74257.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="288" mass="30921" checksum="80083EDB4A6B4855" modified="2015-12-09" version="1">MGPDAYRTAGLATTLETLGHCVRDDGNLQPETVDDIRPPNGIVKNFGAYAGWTRSLLKKASDLGTGDSFPIYLGGDHSLAAGTVAGQAKAAAEKGRPLFVLWLDAHSDFHTLESTDSGNLHGTPLAFACGLPGFDAVLGAPLTHPVSANRVEIMGVRSIDEAERDFLVRHGAGVSDMRRIDEEGIGKLLHPFLERVRAENGLLHVSLDVDFLDPDIAPAVGTTVPGGATFREAHLVMEMLHDSGLVTSLDLVELNPFLDDRGKTARLMVDLTGSLFGRRVFDRPTRSY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AI18</accession>
    <name>A0A0M7AI18_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Protocatechuate 3,4-dioxygenase alpha chain</fullName>
            <ecNumber evidence="5">1.13.11.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">pcaG</name>
        <name evidence="5" type="ORF">LAX5112_03955</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the intradiol ring-cleavage dioxygenase family.</text>
    </comment>
    <dbReference type="EC" id="1.13.11.3" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74738.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673256.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03955"/>
    <dbReference type="EnsemblBacteria" id="CTQ74738">
        <property type="protein sequence ID" value="CTQ74738"/>
        <property type="gene ID" value="LAX5112_03955"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008199">
        <property type="term" value="F:ferric iron binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018578">
        <property type="term" value="F:protocatechuate 3,4-dioxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019439">
        <property type="term" value="P:aromatic compound catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03463">
        <property type="entry name" value="3_4-PCD_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.130.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000627">
        <property type="entry name" value="Intradiol_dOase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015889">
        <property type="entry name" value="Intradiol_dOase_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012786">
        <property type="entry name" value="Protocat_dOase_a"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00775">
        <property type="entry name" value="Dioxygenase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49482">
        <property type="entry name" value="SSF49482"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02423">
        <property type="entry name" value="protocat_alph"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 5" id="KW-0223">Dioxygenase</keyword>
    <keyword evidence="3 5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="INTRADIOL_DIOXYGENAS" evidence="4">
        <location>
            <begin position="46"/>
            <end position="196"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022964"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00775"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ74738.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="206" mass="22872" checksum="8CF799EB31E2393A" modified="2015-12-09" version="1">MRQTLDYLKETPSQTAGPYVHIGLAPGAAGFDIYAQELGHDIAGPNAKGERIRVEGRVIDGMGSPIKDVLLEAWQANTDGIYAHPEHLGEVEDGFRGWCRVIPDFDTGNWTFETVKPGAVTDLNGRQMAPHISLWIVARGINVGLQTRLYFSDETSANAADPVLNLIEWERRRATLIAERTDSDGTPVYRFDIKLQGEDETVFFDI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIF9</accession>
    <name>A0A0M7AIF9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04044</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ74935.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74935">
        <property type="protein sequence ID" value="CTQ74935"/>
        <property type="gene ID" value="LAX5112_04044"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ74935.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="169" mass="18699" checksum="8E8640311EC7D36A" modified="2015-12-09" version="1">MAPIDLEPDCTNCAALCCVVFAFDKSESFGLDKAAGEECPNLKADNACKIFEERVERGFPGCVSYTCFGAGQRVTQEVFGGGSWREEPALKAQMGAALSVLRRIHEQLVLLKAARELPLTSEHSTQIQSYEAMLCSNDTWTEETLSRFPIDKVASDIRNWMKQLRGLVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIK9</accession>
    <name>A0A0M7AIK9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">SnoaL-like domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04040</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ74928.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673329.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04040"/>
    <dbReference type="EnsemblBacteria" id="CTQ74928">
        <property type="protein sequence ID" value="CTQ74928"/>
        <property type="gene ID" value="LAX5112_04040"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032710">
        <property type="entry name" value="NTF2-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037401">
        <property type="entry name" value="SnoaL-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12680">
        <property type="entry name" value="SnoaL_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54427">
        <property type="entry name" value="SSF54427"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SnoaL-like" evidence="1">
        <location>
            <begin position="11"/>
            <end position="131"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12680"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74928.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="177" mass="19563" checksum="A8E34424EC2D9A13" modified="2015-12-09" version="1">MEPFSKAQQKLIDVWDAHTASEFAHKNAGEAIATMTDHPVLIHVPVNTGATGKEPLRKFYAEIFIPQMPEDAELELLTRTVGSNRIVDEFILHLTHTVRMDWFAPGIEPTGKRLAVPHVGIIAFEGGLIASEHIYWDQATVLKQMGLLDEDLPVLGSEQGARLLDPAAPANQLIDRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIM0</accession>
    <name>A0A0M7AIM0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Flagellar biosynthesis protein FlhA</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">flhA_2</name>
        <name evidence="7" type="synonym">flhA</name>
        <name evidence="9" type="ORF">LAX5112_04077</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cell membrane</location>
            <topology evidence="7">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ74995.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008192641.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04077"/>
    <dbReference type="EnsemblBacteria" id="CTQ74995">
        <property type="protein sequence ID" value="CTQ74995"/>
        <property type="gene ID" value="LAX5112_04077"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044780">
        <property type="term" value="P:bacterial-type flagellum assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009306">
        <property type="term" value="P:protein secretion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.540">
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    </dbReference>
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    </dbReference>
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    </dbReference>
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        <property type="entry name" value="FHIPEP_4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006301">
        <property type="entry name" value="FlhA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001712">
        <property type="entry name" value="T3SS_FHIPEP"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00771">
        <property type="entry name" value="FHIPEP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005419">
        <property type="entry name" value="FlhA"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="TYPE3IMAPROT"/>
    </dbReference>
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        <property type="entry name" value="FlhA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1005">Bacterial flagellum biogenesis</keyword>
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    <keyword evidence="9" id="KW-0966">Cell projection</keyword>
    <keyword evidence="9" id="KW-0969">Cilium</keyword>
    <keyword evidence="9" id="KW-0282">Flagellum</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0653">Protein transport</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
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    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="7" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="20"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="44"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
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            <end position="95"/>
        </location>
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    <feature type="transmembrane region" description="Helical" evidence="7">
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            <end position="138"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="208"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="249"/>
            <end position="266"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="286"/>
            <end position="303"/>
        </location>
    </feature>
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        <location>
            <begin position="333"/>
            <end position="354"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008835"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU364093"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ74995.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="696" mass="75919" checksum="7B467459D0B546C8" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIQ1</accession>
    <name>A0A0M7AIQ1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">TRAP-type C4-dicarboxylate transport system, small permease component</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">LAX5112_03959</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
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            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74749.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03959"/>
    <dbReference type="EnsemblBacteria" id="CTQ74749">
        <property type="protein sequence ID" value="CTQ74749"/>
        <property type="gene ID" value="LAX5112_03959"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
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    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="20"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="60"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="93"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="137"/>
            <end position="159"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ74749.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="169" mass="17991" checksum="C07173F2E2407B51" modified="2015-12-09" version="1">MPADHLTGNSGFTGIASRVITVWALLGGGVLLAVVAVNMMSILGSMFGKPFPGDFELTEMGVAVAVFAFLPYCQLTGANVSADIFTAGASKRLIAFFTLLGSLVALGFASLLIWRMFHGMLDQREYGYTTTILQIPHWMAFVPILVSLVLLALASLVTLMRDTSALSKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKW0</accession>
    <name>A0A0M7AKW0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Pur regulon 18 kDa protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">cvpA</name>
        <name evidence="7" type="ORF">LAX5112_03859</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
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            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74423.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008192143.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03859"/>
    <dbReference type="EnsemblBacteria" id="CTQ74423">
        <property type="protein sequence ID" value="CTQ74423"/>
        <property type="gene ID" value="LAX5112_03859"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009403">
        <property type="term" value="P:toxin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003825">
        <property type="entry name" value="Colicin-V_CvpA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02674">
        <property type="entry name" value="Colicin_V"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
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    <keyword evidence="3 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="9"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="33"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="62"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="103"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="168"/>
            <end position="204"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ74423.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="204" mass="22536" checksum="787AC3810A077FB6" modified="2015-12-09" version="1">MPITLLDGLLLVIMLISAVLAMIRGFVREVLSIVSWVAAAVAAFMLYERVMPYTQQYISQDLVAMGVSAAAVFLVTLIVVSYITMRISDFILDSRIGALDRTLGFVFGAVRGLLLVVVAMMFFNWFVQPEQQPRWVQNAKSLPILLSVGERLVAVLPEDPEKAILDKIRENELTGGQRSSAPAEEPAYSDSERQGLEQLTTDSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKW4</accession>
    <name>A0A0M7AKW4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Exodeoxyribonuclease III</fullName>
            <ecNumber evidence="3">3.1.11.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">xthA_2</name>
        <name evidence="3" type="ORF">LAX5112_04009</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the DNA repair enzymes AP/ExoA family.</text>
    </comment>
    <dbReference type="EC" id="3.1.11.2" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74860.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673314.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04009"/>
    <dbReference type="EnsemblBacteria" id="CTQ74860">
        <property type="protein sequence ID" value="CTQ74860"/>
        <property type="gene ID" value="LAX5112_04009"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004519">
        <property type="term" value="F:endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008853">
        <property type="term" value="F:exodeoxyribonuclease III activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd09086">
        <property type="entry name" value="ExoIII-like_AP-endo"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004808">
        <property type="entry name" value="AP_endonuc_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020847">
        <property type="entry name" value="AP_endonuclease_F1_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036691">
        <property type="entry name" value="Endo/exonu/phosph_ase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005135">
        <property type="entry name" value="Endo/exonuclease/phosphatase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037493">
        <property type="entry name" value="ExoIII-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43250">
        <property type="entry name" value="PTHR43250"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03372">
        <property type="entry name" value="Exo_endo_phos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56219">
        <property type="entry name" value="SSF56219"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00633">
        <property type="entry name" value="xth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00726">
        <property type="entry name" value="AP_NUCLEASE_F1_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51435">
        <property type="entry name" value="AP_NUCLEASE_F1_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Endo/exonuclease/phosphatase" evidence="2">
        <location>
            <begin position="8"/>
            <end position="260"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007092"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF03372"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ74860.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="269" mass="30657" checksum="4C7DB764542A43ED" modified="2015-12-09" version="1">MTNRLKLVTWNINSVRLRMPIVEQLIEEVAPDVICLQETKCPDANFPEKAFRAAGYEHMAINGQKGYHGVATLSKLPLRNVEKRDFCNVGDSRHVAIDVPFNGTALRVHNFYVPAGGDEPDREKNDKFGHKLDFLSEMQEWLQGAETAKPAVLVGDLNVAPYEHDVWSHKKLLKVVSHTPIETELFENVRETGGWLDAMRQFTPMEEKLYTWWSYRAKDWSAADKGRRLDHVWVSEPASAHIKSTEVLRDARGWEKPSDHAPVVAVFEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AL70</accession>
    <name>A0A0M7AL70_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04390</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75868.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673608.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000023.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75868">
        <property type="protein sequence ID" value="CTQ75868"/>
        <property type="gene ID" value="LAX5112_04390"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="27"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="15"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75868.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="194" mass="20875" checksum="02830FF863E9268D" modified="2015-12-09" version="1">MNERGGSNVKTRFSGQGLADTLKREKALNRKRKQKSKQQACTVLAVSGDEAGPTGSEGMEQPRLPDPGSSRFSVREGVMDGGVPGADVGQQKMLESPQDMAARLYRAFAGQMDQLEARLADLFDKAGAEPPTGGLQEIDKTVKTLASLAKTLTALMDLKTDVEPDAEGENLDDREELRAALARRLERLCEAGAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AML9</accession>
    <name>A0A0M7AML9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04482</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ76139.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673678.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000024.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04482"/>
    <dbReference type="EnsemblBacteria" id="CTQ76139">
        <property type="protein sequence ID" value="CTQ76139"/>
        <property type="gene ID" value="LAX5112_04482"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045510">
        <property type="entry name" value="DUF6481"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20089">
        <property type="entry name" value="DUF6481"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="40"/>
            <end position="97"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76139.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="126" mass="14332" checksum="B586457A150E35F7" modified="2015-12-09" version="1">MKKIRNNEHSDRRRAAADAKAALVSAFRSAKEASEPTREARQTERRLIAEARDKRRAEREQIKLDERNRIAAEAAARDAAVAAAAKAEIEARELADKTRVERVLQDEAARKAKRDQRYANRKARQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="38" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANL4</accession>
    <name>A0A0M7ANL4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7 20">Methionine synthase</fullName>
            <ecNumber evidence="6 20">2.1.1.13</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="19 20">5-methyltetrahydrofolate--homocysteine methyltransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="30" type="primary">metH_2</name>
        <name evidence="30" type="ORF">LAX5112_04535</name>
    </gene>
    <organism evidence="30 31">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="31" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="31">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="18 20">Catalyzes the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 20">
            <text>(6S)-5-methyl-5,6,7,8-tetrahydrofolate + L-homocysteine = (6S)-5,6,7,8-tetrahydrofolate + L-methionine</text>
            <dbReference type="Rhea" id="RHEA:11172"/>
            <dbReference type="ChEBI" id="CHEBI:18608"/>
            <dbReference type="ChEBI" id="CHEBI:57453"/>
            <dbReference type="ChEBI" id="CHEBI:57844"/>
            <dbReference type="ChEBI" id="CHEBI:58199"/>
            <dbReference type="EC" id="2.1.1.13"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 20 23">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="3 20 22">
            <name>methylcob(III)alamin</name>
            <dbReference type="ChEBI" id="CHEBI:28115"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="4 20">Amino-acid biosynthesis; L-methionine biosynthesis via de novo pathway; L-methionine from L-homocysteine (MetH route): step 1/1.</text>
    </comment>
    <comment type="domain">
        <text evidence="20">Modular enzyme with four functionally distinct domains. The isolated Hcy-binding domain catalyzes methyl transfer from free methylcobalamin to homocysteine. The Hcy-binding domain in association with the pterin-binding domain catalyzes the methylation of cob(I)alamin by methyltetrahydrofolate and the methylation of homocysteine. The B12-binding domain binds the cofactor. The AdoMet activation domain binds S-adenosyl-L-methionine. Under aerobic conditions cob(I)alamin can be converted to inactive cob(II)alamin. Reductive methylation by S-adenosyl-L-methionine and flavodoxin regenerates methylcobalamin.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the vitamin-B12 dependent methionine synthase family.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.13" evidence="6 20"/>
    <dbReference type="EMBL" id="CXWD01000025">
        <property type="protein sequence ID" value="CTQ76247.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673726.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000025.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04535"/>
    <dbReference type="EnsemblBacteria" id="CTQ76247">
        <property type="protein sequence ID" value="CTQ76247"/>
        <property type="gene ID" value="LAX5112_04535"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00051">
        <property type="reaction ID" value="UER00081"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031419">
        <property type="term" value="F:cobalamin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008705">
        <property type="term" value="F:methionine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042558">
        <property type="term" value="P:pteridine-containing compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd02069">
        <property type="entry name" value="methionine_synthase_B12_BD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1240.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.196.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003759">
        <property type="entry name" value="Cbl-bd_cap"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006158">
        <property type="entry name" value="Cobalamin-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036724">
        <property type="entry name" value="Cobalamin-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011005">
        <property type="entry name" value="Dihydropteroate_synth-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003726">
        <property type="entry name" value="HCY_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036589">
        <property type="entry name" value="HCY_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033706">
        <property type="entry name" value="Met_synthase_B12-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011822">
        <property type="entry name" value="MetH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036594">
        <property type="entry name" value="Meth_synthase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000489">
        <property type="entry name" value="Pterin-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004223">
        <property type="entry name" value="VitB12-dep_Met_synth_activ_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037010">
        <property type="entry name" value="VitB12-dep_Met_synth_activ_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02310">
        <property type="entry name" value="B12-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02607">
        <property type="entry name" value="B12-binding_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02965">
        <property type="entry name" value="Met_synt_B12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00809">
        <property type="entry name" value="Pterin_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02574">
        <property type="entry name" value="S-methyl_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000381">
        <property type="entry name" value="MetH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01018">
        <property type="entry name" value="B12-binding_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47644">
        <property type="entry name" value="SSF47644"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51717">
        <property type="entry name" value="SSF51717"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52242">
        <property type="entry name" value="SSF52242"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56507">
        <property type="entry name" value="SSF56507"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82282">
        <property type="entry name" value="SSF82282"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02082">
        <property type="entry name" value="metH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50974">
        <property type="entry name" value="ADOMET_ACTIVATION"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51332">
        <property type="entry name" value="B12_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51337">
        <property type="entry name" value="B12_BINDING_NTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50970">
        <property type="entry name" value="HCY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50972">
        <property type="entry name" value="PTERIN_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 20" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="10 20 22" id="KW-0846">Cobalamin</keyword>
    <keyword evidence="17 20 21" id="KW-0170">Cobalt</keyword>
    <keyword evidence="13 20 21" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="16 20" id="KW-0486">Methionine biosynthesis</keyword>
    <keyword evidence="8 20 24" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="31" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="14" id="KW-0677">Repeat</keyword>
    <keyword evidence="12 20 22" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="11 20 24" id="KW-0808">Transferase</keyword>
    <keyword evidence="15 20 21" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Hcy-binding" evidence="25">
        <location>
            <begin position="7"/>
            <end position="327"/>
        </location>
    </feature>
    <feature type="domain" description="Pterin-binding" evidence="26">
        <location>
            <begin position="358"/>
            <end position="619"/>
        </location>
    </feature>
    <feature type="domain" description="B12-binding N-terminal" evidence="29">
        <location>
            <begin position="650"/>
            <end position="744"/>
        </location>
    </feature>
    <feature type="domain" description="B12-binding" evidence="28">
        <location>
            <begin position="751"/>
            <end position="887"/>
        </location>
    </feature>
    <feature type="domain" description="AdoMet activation" evidence="27">
        <location>
            <begin position="903"/>
            <end position="1236"/>
        </location>
    </feature>
    <feature type="region of interest" description="Methylcob(III)alamin binding" evidence="22">
        <location>
            <begin position="761"/>
            <end position="765"/>
        </location>
    </feature>
    <feature type="region of interest" description="S-adenosyl-L-methionine binding" evidence="22">
        <location>
            <begin position="1198"/>
            <end position="1199"/>
        </location>
    </feature>
    <feature type="binding site" evidence="21 23">
        <location>
            <position position="249"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="21 23">
        <location>
            <position position="312"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="21 23">
        <location>
            <position position="313"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="22">
        <location>
            <position position="694"/>
        </location>
        <ligand>
            <name>methylcob(III)alamin</name>
            <dbReference type="ChEBI" id="CHEBI:28115"/>
        </ligand>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="21">
        <location>
            <position position="764"/>
        </location>
        <ligand>
            <name>methylcob(III)alamin</name>
            <dbReference type="ChEBI" id="CHEBI:28115"/>
        </ligand>
        <ligandPart>
            <name>Co</name>
            <dbReference type="ChEBI" id="CHEBI:27638"/>
        </ligandPart>
    </feature>
    <feature type="binding site" evidence="22">
        <location>
            <position position="809"/>
        </location>
        <ligand>
            <name>methylcob(III)alamin</name>
            <dbReference type="ChEBI" id="CHEBI:28115"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="22">
        <location>
            <position position="813"/>
        </location>
        <ligand>
            <name>methylcob(III)alamin</name>
            <dbReference type="ChEBI" id="CHEBI:28115"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="22">
        <location>
            <position position="866"/>
        </location>
        <ligand>
            <name>methylcob(III)alamin</name>
            <dbReference type="ChEBI" id="CHEBI:28115"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="22">
        <location>
            <position position="953"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="22">
        <location>
            <position position="1143"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001700"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00001956"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00005178"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00010398"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00012032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00013998"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022628"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00023167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00023285"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="ARBA" id="ARBA00025552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="ARBA" id="ARBA00031040"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="20">
        <source>
            <dbReference type="PIRNR" id="PIRNR000381"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="21">
        <source>
            <dbReference type="PIRSR" id="PIRSR000381-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="22">
        <source>
            <dbReference type="PIRSR" id="PIRSR000381-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="23">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00333"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="24">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00346"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="25">
        <source>
            <dbReference type="PROSITE" id="PS50970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="26">
        <source>
            <dbReference type="PROSITE" id="PS50972"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="27">
        <source>
            <dbReference type="PROSITE" id="PS50974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="28">
        <source>
            <dbReference type="PROSITE" id="PS51332"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="29">
        <source>
            <dbReference type="PROSITE" id="PS51337"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="30">
        <source>
            <dbReference type="EMBL" id="CTQ76247.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="31">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="1242" mass="136176" checksum="68567496D0978D88" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANS9</accession>
    <name>A0A0M7ANS9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase</fullName>
            <ecNumber evidence="4">4.2.1.135</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">pglF</name>
        <name evidence="4" type="ORF">LAX5112_04235</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the polysaccharide synthase family.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.135" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75443.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673471.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000021.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04235"/>
    <dbReference type="EnsemblBacteria" id="CTQ75443">
        <property type="protein sequence ID" value="CTQ75443"/>
        <property type="gene ID" value="LAX5112_04235"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd05237">
        <property type="entry name" value="UDP_invert_4-6DH_SDR_e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003869">
        <property type="entry name" value="Polysac_CapD-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02719">
        <property type="entry name" value="Polysacc_synt_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0456">Lyase</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="38"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="76"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="107"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="domain" description="Polysacc_synt_2" evidence="3">
        <location>
            <begin position="289"/>
            <end position="572"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007430"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF02719"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ75443.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="627" mass="67568" checksum="36D132C419391FDA" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANW7</accession>
    <name>A0A0M7ANW7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">NAD-dependent dihydropyrimidine dehydrogenase subunit PreT</fullName>
            <ecNumber evidence="2">1.3.1.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">preT</name>
        <name evidence="2" type="ORF">LAX5112_04478</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.3.1.1" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ76132.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673695.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000024.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04478"/>
    <dbReference type="EnsemblBacteria" id="CTQ76132">
        <property type="protein sequence ID" value="CTQ76132"/>
        <property type="gene ID" value="LAX5112_04478"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004159">
        <property type="term" value="F:dihydropyrimidine dehydrogenase (NAD+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1060.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017896">
        <property type="entry name" value="4Fe4S_Fe-S-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028261">
        <property type="entry name" value="DPD_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023753">
        <property type="entry name" value="FAD/NAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009051">
        <property type="entry name" value="Helical_ferredxn"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14691">
        <property type="entry name" value="Fer4_20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07992">
        <property type="entry name" value="Pyr_redox_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51379">
        <property type="entry name" value="4FE4S_FER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="1">
        <location>
            <begin position="34"/>
            <end position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51379"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76132.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="448" mass="47339" checksum="E4F4911038CFB0EF" modified="2015-12-09" version="1">MTQTKAGPDIAAGRLPQEAYTENFSDLHPLLEPHEAQVEADRCYFCYDAPCMQACPTSIDIPQFIRQISTGNPTGSAKTIFDQNILGGMCARVCPTETLCEQVCVREIAEGKPVQIGQLQRYATDHYMAENETQPYQRAASTGKKVAVVGAGPAGLACAHRLAMHGHDVTLFDAREKAGGLNEFGIASYKSVDNFAAREVEFVLSIGGIELKTGSRLGDNLNLADLRASYDAIFLGIGLGGVNALGLDGEDKGGSLDAVDYIANLRQADDLGKLPVGRRVVVIGGGMTAVDIAVQTKLLGADDVTIAYRRGQDRMNASEYEQHLAQTNGVKIMTWAQPKALVAANGSVTGIELERTQDQDGSLTGTGETVTLEADMVFKAIGQTLVDTDLGGTLTLEKGRIVVDADRKTSLDDVWAGGDCVAGGEDLTVAAVEDGKIAAEAINAALSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANZ2</accession>
    <name>A0A0M7ANZ2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04189</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75334.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673430.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04189"/>
    <dbReference type="EnsemblBacteria" id="CTQ75334">
        <property type="protein sequence ID" value="CTQ75334"/>
        <property type="gene ID" value="LAX5112_04189"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="6"/>
            <end position="147"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75334.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="165" mass="17680" checksum="657DAC9D0F7EEAD5" modified="2015-12-09" version="1">MKQTSWVIRLEDAIDDTAIEALQAEAFGPGRFVRTAFRIRENVPHRQDLAFVGLSGSRIAGSVRLSPITIGEADALLLGPLTVSPDFKNRGLGKALMWTALEAAKAAGDEYVLLVGDAPYYSPFGFEQVYFGSITLPGPVDPERLLIARLHDGALPTGSVQGKAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AP34</accession>
    <name>A0A0M7AP34_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">envZ_2</name>
        <name evidence="10" type="ORF">LAX5112_04547</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000025">
        <property type="protein sequence ID" value="CTQ76281.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008197069.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000025.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04547"/>
    <dbReference type="EnsemblBacteria" id="CTQ76281">
        <property type="protein sequence ID" value="CTQ76281"/>
        <property type="gene ID" value="LAX5112_04547"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0418">Kinase</keyword>
    <keyword evidence="7" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 10" id="KW-0808">Transferase</keyword>
    <keyword evidence="7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="196"/>
            <end position="219"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="9">
        <location>
            <begin position="220"/>
            <end position="272"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="8">
        <location>
            <begin position="280"/>
            <end position="479"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="136"/>
            <end position="156"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ76281.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="479" mass="53064" checksum="E96CBF3F3AD7C17B" modified="2015-12-09" version="1">MSASSPRFSVLRRLWPRNLASQLILLLLAAIVVVQAISIYIFHDERRIALVALARDSILARAVSIAELLEETPPYLHSRVLEASSTRYVAFWTGEVPLAKEPGKSRFEQRVQNYAARQLGSERTIHINLHSDEKRGPSWRSRVDGGKESWRDVPKSERPRHLKRVMNKPEDLSLSILLNDGSWLNMATSYRPPPGAFIPLVVQLSLMGLAIIGIVAFAVRRVTRPLRGLADAAGRLGRGEDVDSLPETGPSEVRAVTIAFNEMQERLTRFVRDRTRMLAAISHDLRTPITSLRLRAEFIDDEENRTKMIETLDDMAAMAEAALRFAKDDASQEPAEKADLGALLESLADDQQDLGHACEVDVEERIVLSCRPLSLKRAFRNLIENGIRYGGSVKITAKALEADVIVEIHDQGPGIPEDRLADVFEPFVRLEESRSEETGGIGLGLAIARSIIHAHGGTITLSNVAGTGLRVEVRLPKGN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APP5</accession>
    <name>A0A0M7APP5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Putative ABC transporter-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_04586</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the bacterial solute-binding protein 1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000026">
        <property type="protein sequence ID" value="CTQ76412.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673773.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000026.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04586"/>
    <dbReference type="EnsemblBacteria" id="CTQ76412">
        <property type="protein sequence ID" value="CTQ76412"/>
        <property type="gene ID" value="LAX5112_04586"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006059">
        <property type="entry name" value="SBP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01547">
        <property type="entry name" value="SBP_bac_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0574">Periplasm</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="6">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809519" evidence="6">
        <location>
            <begin position="24"/>
            <end position="434"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008520"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ76412.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="434" mass="46874" checksum="AC515091142B0C4F" modified="2015-12-09" version="1">MYIKNALCATTAFVVMTAVAAQAETLTIATVNNGDMIRMQGYTDDFTAKTGHTVEWVTLEENVLRQRVTTDISTKGGAFDIMTIGMYETPIWGANGWLVPLNDLSEEYDAGDILPAMAGGLSHDGTLYAAPFYGESSMIMYRTDLMAKAGLEMPDAPTWDFIKEAAAAMTDRDNEINGICLRGKAGWGEGGAFITAMSNSFGARWFDMDWNAQFDTEQWANTLNFYKDMMDASGPPGYATNGFNENLSLFQQGKCGMWIDATVAASFVTNPNDSTVAESVGFALAPDAGLGKRSNWLWAWALAIPAGTQKEAAAKEFIEWATSKSYIELVAAKEGWANVPPGARTSLYETPEYQAVPFAKMTLDSILSADPNNSTVEPSPYVGIQFAAIPEFAGIATEVSQEFSAAYAGQQTVEEALAKAQALTNDAMEAAGYR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARB2</accession>
    <name>A0A0M7ARB2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Long-chain-fatty-acid--CoA ligase</fullName>
            <ecNumber evidence="4">6.2.1.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_04766</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="6.2.1.3" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000030">
        <property type="protein sequence ID" value="CTQ76982.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673929.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000030.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04766"/>
    <dbReference type="EnsemblBacteria" id="CTQ76982">
        <property type="protein sequence ID" value="CTQ76982"/>
        <property type="gene ID" value="LAX5112_04766"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004467">
        <property type="term" value="F:long-chain fatty acid-CoA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12780">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025110">
        <property type="entry name" value="AMP-bd_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045851">
        <property type="entry name" value="AMP-bd_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020845">
        <property type="entry name" value="AMP-binding_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000873">
        <property type="entry name" value="AMP-dep_Synth/Lig"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042099">
        <property type="entry name" value="ANL_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00501">
        <property type="entry name" value="AMP-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13193">
        <property type="entry name" value="AMP-binding_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00455">
        <property type="entry name" value="AMP_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0007">Acetylation</keyword>
    <keyword evidence="4" id="KW-0436">Ligase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AMP-binding" evidence="2">
        <location>
            <begin position="20"/>
            <end position="441"/>
        </location>
    </feature>
    <feature type="domain" description="AMP-binding_C" evidence="3">
        <location>
            <begin position="451"/>
            <end position="526"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022990"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF13193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ76982.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="541" mass="59751" checksum="BA7023A06E237A98" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARB4</accession>
    <name>A0A0M7ARB4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_05013</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000040">
        <property type="protein sequence ID" value="CTQ77685.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674139.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000040.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_05013"/>
    <dbReference type="EnsemblBacteria" id="CTQ77685">
        <property type="protein sequence ID" value="CTQ77685"/>
        <property type="gene ID" value="LAX5112_05013"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ77685.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="333" mass="35877" checksum="8EDB63C674A32A06" modified="2015-12-09" version="1">MAKPGLSEFLDVKISDSQFSDDDVITVRRYIYGDMHVTLEEGAGLFRLNTAGLAMPQTWFELFPEAIGDILVHQANPQGYVSDENAHWLIGQITANGQVCSRTELDAVLHVLEKARQAPRFLEQFALKIVADSVISGQGATRSGATLTPGVILDAEVEILRRVLYAGAGCGGIAISKAEAEILFDLNDATSESDNAPAWSELFAKAVANYLMALSGFAPPPREVALAREDWINSPGGFDGGISGFFKSMFGGGVSGVRDAYSDQPDPFAAKGAAMAAGIAVNEVVTEDEAQWLVDRIGRDGVLHENEEALLRFIRQESPDIHPALKPLMEKVI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARG6</accession>
    <name>A0A0M7ARG6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">DNA replication initiation protein gpA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_05034</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Possible endonuclease which induces a single-strand cut and initiates DNA replication.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the phage GPA family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000045">
        <property type="protein sequence ID" value="CTQ77735.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_000252566.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000045.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77735">
        <property type="protein sequence ID" value="CTQ77735"/>
        <property type="gene ID" value="LAX5112_05034"/>
    </dbReference>
    <dbReference type="GeneID" id="39482435"/>
    <dbReference type="GeneID" id="55495894"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004519">
        <property type="term" value="F:endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008766">
        <property type="entry name" value="Replication_gene_A"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05840">
        <property type="entry name" value="Phage_GPA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0235">DNA replication</keyword>
    <keyword evidence="5" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0540">Nuclease</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003293"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009260"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022759"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ77735.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="513" mass="58719" checksum="EF2D4DC9E3BC8072" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARU2</accession>
    <name>A0A0M7ARU2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Bacterial extracellular solute-binding proteins, family 3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_04982</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000037">
        <property type="protein sequence ID" value="CTQ77619.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04982"/>
    <dbReference type="EnsemblBacteria" id="CTQ77619">
        <property type="protein sequence ID" value="CTQ77619"/>
        <property type="gene ID" value="LAX5112_04982"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00062">
        <property type="entry name" value="PBPb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809613" evidence="2">
        <location>
            <begin position="20"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="domain" description="PBPb" evidence="3">
        <location>
            <begin position="21"/>
            <end position="244"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00062"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ77619.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="244" mass="27442" checksum="EF89CB6E63C17C67" modified="2015-12-09" version="1">MKLAILAALCISFAFTAKAETLEIVTEHLPPFNYLDDGVPKGIGTEVVQAVLKETGRAAPIQFLPWARSYQMALQTPGTLIYSILRTPERENKFAWIGKIAPYGVSLYQLVQDNAPDLSSLEDARPLRIGVYFGDAKAEFLQANGFTNLSSVENDRLNLRKLLLKRIDLMIIDDAVINELIELEGVDPSKIRRALPIQELSGYAYMAFQKDTNPKLVEEFRRGLEKVKETGVFDAILEEYYLIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARW6</accession>
    <name>A0A0M7ARW6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">EF hand</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_04628</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000027">
        <property type="protein sequence ID" value="CTQ76543.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76543">
        <property type="protein sequence ID" value="CTQ76543"/>
        <property type="gene ID" value="LAX5112_04628"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011992">
        <property type="entry name" value="EF-hand-dom_pair"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018247">
        <property type="entry name" value="EF_Hand_1_Ca_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002048">
        <property type="entry name" value="EF_hand_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13499">
        <property type="entry name" value="EF-hand_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00054">
        <property type="entry name" value="EFh"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47473">
        <property type="entry name" value="SSF47473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00018">
        <property type="entry name" value="EF_HAND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50222">
        <property type="entry name" value="EF_HAND_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="EF-hand" evidence="2">
        <location>
            <begin position="19"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="2">
        <location>
            <begin position="59"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="24"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="24"/>
            <end position="44"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50222"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ76543.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="145" mass="15486" checksum="58D697988C11F1D0" modified="2015-12-09" version="1">MSIGGLSSGMMDFSSIQAQIKERMTERFNSADTDGSNGLSLEEFNEASKDSPLNRAGSASGLSSEELFAELDTDGNGEVTGDEFKDRFNSRSGNGLAASMLPQLLSLQEQSGGLSSMIDTSGNFQSNTFDQLMEMLGSGSEDERR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AST2</accession>
    <name>A0A0M7AST2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04656</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000027">
        <property type="protein sequence ID" value="CTQ76624.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76624">
        <property type="protein sequence ID" value="CTQ76624"/>
        <property type="gene ID" value="LAX5112_04656"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="44"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="71"/>
            <end position="86"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76624.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="138" mass="15014" checksum="CFE74BB8D6FDBFE3" modified="2015-12-09" version="1">MGVAAEIGQHGLWATEGRFGVDHPFDSAQGREPCREDVTFGQPGQITEEDQIKCTMQNHQPLQKQTPEQSGQDPDRQEKPWTARDPSRAIRRQASAGDNDVDMRMMGECRAPGMQDAGHADARAQVPGIACDGGQCLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASW3</accession>
    <name>A0A0M7ASW3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Leucine-responsive regulatory protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">lrp_11</name>
        <name evidence="5" type="ORF">LAX5112_04930</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000035">
        <property type="protein sequence ID" value="CTQ77506.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674073.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000035.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04930"/>
    <dbReference type="EnsemblBacteria" id="CTQ77506">
        <property type="protein sequence ID" value="CTQ77506"/>
        <property type="gene ID" value="LAX5112_04930"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000485">
        <property type="entry name" value="AsnC-type_HTH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019888">
        <property type="entry name" value="Tscrpt_reg_AsnC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019887">
        <property type="entry name" value="Tscrpt_reg_AsnC/Lrp_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01037">
        <property type="entry name" value="AsnC_trans_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00033">
        <property type="entry name" value="HTHASNC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00344">
        <property type="entry name" value="HTH_ASNC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50956">
        <property type="entry name" value="HTH_ASNC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH asnC-type" evidence="4">
        <location>
            <begin position="3"/>
            <end position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50956"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ77506.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="159" mass="17896" checksum="44DD0DE2DEC5C68B" modified="2015-12-09" version="1">MKLDQVDISILNALQDNARTGLEQLAHVSGISIASVQRRLKALREGGFILREVALLDGAKLGQAMTFIIMVELERERLDQIDDFVKRARQEPQVQQCYYVTGEADFCLICIAKDMAEFEALTHRLFFQNANVRRFRTSVVMGRKKIGLNVPLDTNGLAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AT23</accession>
    <name>A0A0M7AT23_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04748</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000030">
        <property type="protein sequence ID" value="CTQ76933.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04748"/>
    <dbReference type="EnsemblBacteria" id="CTQ76933">
        <property type="protein sequence ID" value="CTQ76933"/>
        <property type="gene ID" value="LAX5112_04748"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017136">
        <property type="entry name" value="UCP037205"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37463">
        <property type="entry name" value="PTHR37463"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10013">
        <property type="entry name" value="DUF2256"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF037205">
        <property type="entry name" value="UCP037205"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ76933.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="48" mass="5922" checksum="9AF09D4721394F36" modified="2015-12-09" version="1">MKMRRKADLSQKICAACGRPFAWRKKWARDWDEVKYCSERCKRDQKKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AU58</accession>
    <name>A0A0M7AU58_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF45 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04814</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000031">
        <property type="protein sequence ID" value="CTQ77134.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673968.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000031.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04814"/>
    <dbReference type="EnsemblBacteria" id="CTQ77134">
        <property type="protein sequence ID" value="CTQ77134"/>
        <property type="gene ID" value="LAX5112_04814"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002725">
        <property type="entry name" value="YgjP-like_metallopeptidase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01863">
        <property type="entry name" value="DUF45"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF45" evidence="1">
        <location>
            <begin position="47"/>
            <end position="245"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01863"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77134.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="253" mass="28170" checksum="3C83AB7073E2958E" modified="2015-12-09" version="1">MIRLKTLGSKLRARKPALPDHIEIDTGDAPVRIRLRANPRAQRYLLRLPADHSGPVLTVPKGGDIQKAERFARQHIGWLLERLEGRPDHVALRPGDLVPLRGKEHLIVPTGQLRGLVSTGQAVCGTPALLVPGTDEHAPRKVTTWLKGQAKADLTQRAEDHAAKIGKKIAAISVRDTKSRWGSCASNGRLSFSWRLILAPPDILDYVAAHEVAHLKEMNHSDRFWRLCEELAPQTPEARVWLKEHGIRLHGYG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AUX2</accession>
    <name>A0A0M7AUX2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04891</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000034">
        <property type="protein sequence ID" value="CTQ77384.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674035.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000034.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77384">
        <property type="protein sequence ID" value="CTQ77384"/>
        <property type="gene ID" value="LAX5112_04891"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ77384.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="335" mass="38093" checksum="7F9B64BAC3C2A2CD" modified="2015-12-09" version="1">MATKQNSEISARERFELYCADYGKTLDPSDQILDVIINAGSQLGFIFGQETADKFMGELLENVFDSHGSEISSAELKWQEFAWKYRQTIATELPGGTSMFWLIAYAKFGIVLDGGRNIDELQKSISNAIKQIEKFHATCITPPWQDDQEDVIQTIVSWSSGRHALDNGQPIEPSGLALLADVNERTVKNLMAKKQEGLRNKNGKVEHGEAVEWLESKKNYWNSVWMSQDFNEDAEIAAESEEQFVFVPVTRDGSIFHPGLIDKIGFRVGPKDKQSDCETYEEALQKLQTMPKPYWSRKNANGMRVVLSGIRWERLSLSELKKFEDDPERRLQATL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AVN3</accession>
    <name>A0A0M7AVN3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">ATP-dependent Clp protease adapter protein ClpS</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">clpS_2</name>
        <name evidence="1" type="synonym">clpS</name>
        <name evidence="3" type="ORF">LAX5112_04991</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation.</text>
    </comment>
    <comment type="subunit">
        <text evidence="1">Binds to the N-terminal domain of the chaperone ClpA.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the ClpS family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000038">
        <property type="protein sequence ID" value="CTQ77644.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040450892.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000038.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04991"/>
    <dbReference type="EnsemblBacteria" id="CTQ77644">
        <property type="protein sequence ID" value="CTQ77644"/>
        <property type="gene ID" value="LAX5112_04991"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008233">
        <property type="term" value="F:peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030163">
        <property type="term" value="P:protein catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1390.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00302">
        <property type="entry name" value="ClpS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022935">
        <property type="entry name" value="ClpS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003769">
        <property type="entry name" value="ClpS_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014719">
        <property type="entry name" value="Ribosomal_L7/12_C/ClpS-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33473">
        <property type="entry name" value="PTHR33473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02617">
        <property type="entry name" value="ClpS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54736">
        <property type="entry name" value="SSF54736"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0645">Protease</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ClpS" evidence="2">
        <location>
            <begin position="18"/>
            <end position="95"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00302"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ77644.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="100" mass="11171" checksum="36F47F067491B24C" modified="2015-12-09" version="1">MSDSDVKLRLSKRTKTEKPKLYKVVLLNDDYTPREFVVLILKGEFRLDSAQADVVMLTAHQKGACVVSVYPKDVAETKATRAIDAAGRLGYPLQFSVEPE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AVV3</accession>
    <name>A0A0M7AVV3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF1214 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_05022</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000041">
        <property type="protein sequence ID" value="CTQ77704.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_05022"/>
    <dbReference type="EnsemblBacteria" id="CTQ77704">
        <property type="protein sequence ID" value="CTQ77704"/>
        <property type="gene ID" value="LAX5112_05022"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.600">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010621">
        <property type="entry name" value="DUF1214"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037049">
        <property type="entry name" value="DUF1214_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06742">
        <property type="entry name" value="DUF1214"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF1214" evidence="1">
        <location>
            <begin position="86"/>
            <end position="193"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF06742"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77704.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="210" mass="23737" checksum="8F4F86CA05E29367" modified="2015-12-09" version="1">MEAILTEAAMTGWSEMNVNFFANPRPERLIWPDRNWVFVPLAGPLDPETGDFGNADYRDLLANDFYFFMAWGTSSAIGRRQAGPGSLYFYTPRDATGAYLDGAQNYKLTVPGPVPASQFWSVTVYDTETRTIIDTDQGRGAVRTIYENPEPNKDGSFDIYFGPEAPEGKENNWVKTIPGKGWFTFMRIYGPQEPIFDSSWVLPDIEEGDW</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZNF3</accession>
    <name>A0A0M6ZNF3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DNA-(apurinic or apyrimidinic site) lyase</fullName>
            <ecNumber evidence="2">4.2.99.18</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="16" type="primary">nei1</name>
        <name evidence="16" type="ORF">LAX5112_00252</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="17" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the FPG family.</text>
    </comment>
    <dbReference type="EC" id="4.2.99.18" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64309.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ64309">
        <property type="protein sequence ID" value="CTQ64309"/>
        <property type="gene ID" value="LAX5112_00252"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140078">
        <property type="term" value="F:class I DNA-(apurinic or apyrimidinic site) endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003684">
        <property type="term" value="F:damaged DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019104">
        <property type="term" value="F:DNA N-glycosylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006284">
        <property type="term" value="P:base-excision repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.190.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015886">
        <property type="entry name" value="DNA_glyclase/AP_lyase_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012319">
        <property type="entry name" value="FPG_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035937">
        <property type="entry name" value="MutM-like_N-ter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010979">
        <property type="entry name" value="Ribosomal_S13-like_H2TH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000214">
        <property type="entry name" value="Znf_DNA_glyclase/AP_lyase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01149">
        <property type="entry name" value="Fapy_DNA_glyco"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06831">
        <property type="entry name" value="H2TH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00898">
        <property type="entry name" value="Fapy_DNA_glyco"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01232">
        <property type="entry name" value="H2TH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46946">
        <property type="entry name" value="SSF46946"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81624">
        <property type="entry name" value="SSF81624"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51068">
        <property type="entry name" value="FPG_CAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51066">
        <property type="entry name" value="ZF_FPG_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0227">DNA damage</keyword>
    <keyword evidence="9" id="KW-0234">DNA repair</keyword>
    <keyword evidence="8" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="12 16" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="6 16" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="10 16" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="11" id="KW-0511">Multifunctional enzyme</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0862">Zinc</keyword>
    <keyword evidence="5 13" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="FPG_CAT" evidence="15">
        <location>
            <begin position="2"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="domain" description="FPG-type" evidence="14">
        <location>
            <begin position="226"/>
            <end position="258"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009409"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012720"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023268"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00391"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS51066"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS51068"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="CTQ64309.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="259" mass="29348" checksum="269962F2E6364788" modified="2015-12-09" version="1">MPEGHTIHRAARDHRKIIKNRYLAVSSPQGRFEDGAAWLNGRLCEEVEAYGKHLIYRFEGETFLHVHLGLFGRIRKRKLPEPEPRGAVRIRMIGDTHLIDINGPTVCEILDPDDLTKLTSRIGPDILRSDADPEKVFARISKSRSSIGKLLMNQAVLAGIGNIYRSEILWRQGIHPDRPGKDLSRDDFERLWTDAVHLLEIGVKRNAIITVDEAAPGRGRYRERVNIFGKRSCPTCAGDITQVEIDTRKAYFCATCQTD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPQ9</accession>
    <name>A0A0M6ZPQ9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00181</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64110.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ64110">
        <property type="protein sequence ID" value="CTQ64110"/>
        <property type="gene ID" value="LAX5112_00181"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ64110.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="48" mass="5392" checksum="F3CBB97DD7DAA1D1" modified="2015-12-09" version="1">MILRVLMSGPYVPGSKDAYLKNEKWPPISERPIQFPSSFGNDRDAALV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPT4</accession>
    <name>A0A0M6ZPT4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00209</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64186.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ64186">
        <property type="protein sequence ID" value="CTQ64186"/>
        <property type="gene ID" value="LAX5112_00209"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ64186.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="97" mass="10986" checksum="D9C78BA49C9C03C9" modified="2015-12-09" version="1">MYTNKNEAQMSSIEFDFVKGHIAATMTLIHALIDQGALDRERLDSFFGAFVKDLPNDRETLSLRLIIDQWREGLRNGESEDSLKGQIFAVIEGGRIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQ47</accession>
    <name>A0A0M6ZQ47_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 13">Dihydrolipoyl dehydrogenase</fullName>
            <ecNumber evidence="3 13">1.8.1.4</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="17" type="primary">lpd</name>
        <name evidence="17" type="ORF">LAX5112_00228</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="18" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="18">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 13">
            <text>(R)-N(6)-dihydrolipoyl-L-lysyl-[protein] + NAD(+) = (R)-N(6)-lipoyl-L-lysyl-[protein] + H(+) + NADH</text>
            <dbReference type="Rhea" id="RHEA:15045"/>
            <dbReference type="Rhea" id="RHEA-COMP:10474"/>
            <dbReference type="Rhea" id="RHEA-COMP:10475"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:83099"/>
            <dbReference type="ChEBI" id="CHEBI:83100"/>
            <dbReference type="EC" id="1.8.1.4"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="11 13">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
        <text evidence="11 13">Binds 1 FAD per subunit.</text>
    </comment>
    <comment type="miscellaneous">
        <text evidence="13">The active site is a redox-active disulfide bond.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 13">Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.</text>
    </comment>
    <dbReference type="EC" id="1.8.1.4" evidence="3 13"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64240.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670224.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00228"/>
    <dbReference type="EnsemblBacteria" id="CTQ64240">
        <property type="protein sequence ID" value="CTQ64240"/>
        <property type="gene ID" value="LAX5112_00228"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004148">
        <property type="term" value="F:dihydrolipoyl dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045454">
        <property type="term" value="P:cell redox homeostasis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.390.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023753">
        <property type="entry name" value="FAD/NAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016156">
        <property type="entry name" value="FAD/NAD-linked_Rdtase_dimer_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006258">
        <property type="entry name" value="Lipoamide_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001100">
        <property type="entry name" value="Pyr_nuc-diS_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004099">
        <property type="entry name" value="Pyr_nucl-diS_OxRdtase_dimer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012999">
        <property type="entry name" value="Pyr_OxRdtase_I_AS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07992">
        <property type="entry name" value="Pyr_redox_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02852">
        <property type="entry name" value="Pyr_redox_dim"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000350">
        <property type="entry name" value="Mercury_reductase_MerA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55424">
        <property type="entry name" value="SSF55424"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01350">
        <property type="entry name" value="lipoamide_DH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00076">
        <property type="entry name" value="PYRIDINE_REDOX_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="5 11 13" id="KW-0274">FAD</keyword>
    <keyword evidence="4 13" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="7 11 13" id="KW-0520">NAD</keyword>
    <keyword evidence="11" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6 13 17" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="9 13" id="KW-0676">Redox-active center</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Pyr_redox_2" evidence="16">
        <location>
            <begin position="6"/>
            <end position="342"/>
        </location>
    </feature>
    <feature type="domain" description="Pyr_redox_dim" evidence="15">
        <location>
            <begin position="363"/>
            <end position="471"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="14">
        <location>
            <begin position="127"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="10">
        <location>
            <position position="461"/>
        </location>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="52"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <begin position="196"/>
            <end position="203"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="219"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="287"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="327"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <begin position="333"/>
            <end position="336"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="disulfide bond" description="Redox-active" evidence="12">
        <location>
            <begin position="43"/>
            <end position="48"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001492"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007532"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012608"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR000350-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRSR" id="PIRSR000350-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRSR" id="PIRSR000350-4"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU003692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="Pfam" id="PF02852"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="Pfam" id="PF07992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="CTQ64240.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="482" mass="51565" checksum="46D7CA166EB0A53C" modified="2015-12-09" version="1">MADTNYDVIIIGSGPGGYVTAIRAAQIGLKTAIVEREHLGGICLNWGCIPTKALLRSAEMMDHANHAKSFGLKLEGKMTADVKDVVARSRGVSARLNGGVGFLMKKNKIDVIWGEAKLTKPGEIVVGKPSKPAVEPQHPAPKGTKGEGTYTAKHIIVATGARPRALPGIEPDGKLIWTYFEAMKPEKMPKSMVVMGSGAIGIEFASFYLSMGVDVTVVELMPNVMPVEDDEISKFARKMLEKRGMKIITEAKVSKVDKAADSITAHVETNDGKVQQITADRLISAVGVQGNIENLGLETLGVKTDRGCIVIDGYGKTNVPGLYAIGDVAGPPMLAHKAEHEGVVCIEKIAGLPNVHPMDKGKIPGCTYCNPQVASVGLTEAKAKEQGRDIRVGRYQFNANGKAIALGEDTGMIKVIFDKKSGELLGAHMVGAEVTELIQGFVVAMNLETTEEDLMHTIFPHPTLSEMMKESVLDAYGRVLNA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQ63</accession>
    <name>A0A0M6ZQ63_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Bicarbonate transport ATP-binding protein CmpC</fullName>
            <ecNumber evidence="3">3.6.3.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">cmpC_1</name>
        <name evidence="3" type="ORF">LAX5112_00438</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the CmpA/NrtA family.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.-" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64895.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670399.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00438"/>
    <dbReference type="EnsemblBacteria" id="CTQ64895">
        <property type="protein sequence ID" value="CTQ64895"/>
        <property type="gene ID" value="LAX5112_00438"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd13553">
        <property type="entry name" value="PBP2_NrtA_CpmA_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044527">
        <property type="entry name" value="NrtA/CpmA_ABC-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006311">
        <property type="entry name" value="TAT_signal"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809197" evidence="2">
        <location>
            <begin position="33"/>
            <end position="468"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00024031"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ64895.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="468" mass="52024" checksum="271E57830708905C" modified="2015-12-09" version="1">MKLRDTLKFTRRAALGTLLAATALVPATGAMAEMLDVEKDELTFGFIKLTDMAPLAVAYELGYFEDEGLFVTLEPQANWKVLLDRVITGELDGAHMLAGQPLAATIGFGTKAHIVTPFSMDLNGNGITVSNEIWEMMKPNIPKMDDGRPQHPISAAALKPVVDKFIDEGKPFNMGMVFPVSTHNYELRYWLASGDIHPGFYSETDISGQIMGEALLSVTPPPQMPATLEAGTIYGYCVGEPWNQQAVFKGIGVPVITDYEIWKNNPEKVFGLTKEFTEENPNTTLAITKALIRAAKWLDENDNANRMEAVEILARSEYVGADAEVIANSMTGTFEYEEGDKRDVPDFNVFYRYYATYPYYSDAVWYLTQMRRWGQISEHKPDSWYDEVAKSVYLPETYLKAARMLVEEGHVAEEDFPWDSDGYRAPTPAADIIDGIPYDGKQPNAYIDSLPIGLKGKQVVDGNEVVGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQY6</accession>
    <name>A0A0M6ZQY6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Pilus (Caulobacter type) biogenesis lipoprotein CpaD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00540</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65189.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00540"/>
    <dbReference type="EnsemblBacteria" id="CTQ65189">
        <property type="protein sequence ID" value="CTQ65189"/>
        <property type="gene ID" value="LAX5112_00540"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019027">
        <property type="entry name" value="Pilus_biogenesis_CpaD-related"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013361">
        <property type="entry name" value="Pilus_CpaD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09476">
        <property type="entry name" value="Pilus_CpaD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02522">
        <property type="entry name" value="pilus_cpaD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ65189.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="237" mass="25375" checksum="ACB98E87CF6A2434" modified="2015-12-09" version="1">MNMAHDPRVKLTVSKGMFVLAALMLSGCQTEPKSNAELLATHDYRYQHPIVVSEAPETLDLPVGKNTRNLRSPVTDTITSFAMDSRRHGSGNVEILVPTGAANESAVHAVVHDIRGALSRGGVNGKHVTTRTYRSTDSSAAAPIRLSYARMKATTGECGAWPKNIGGGIGENTNYYNFGCATQSNLAAIVENPSDLITPRAMTPSDQNRRAVVIEKYRLGETTASSFNEGVGAEVSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZR26</accession>
    <name>A0A0M6ZR26_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 11">Ribosomal RNA small subunit methyltransferase E</fullName>
            <ecNumber evidence="4 11">2.1.1.193</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">rsmE</name>
        <name evidence="12" type="ORF">LAX5112_00346</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10 11">Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 11">
            <text>S-adenosyl-L-methionine + uridine(1498) in 16S rRNA = H(+) + N(3)-methyluridine(1498) in 16S rRNA + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:42920"/>
            <dbReference type="Rhea" id="RHEA-COMP:10283"/>
            <dbReference type="Rhea" id="RHEA-COMP:10284"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:65315"/>
            <dbReference type="ChEBI" id="CHEBI:74502"/>
            <dbReference type="EC" id="2.1.1.193"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 11">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 11">Belongs to the RNA methyltransferase RsmE family.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.193" evidence="4 11"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64636.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00346"/>
    <dbReference type="EnsemblBacteria" id="CTQ64636">
        <property type="protein sequence ID" value="CTQ64636"/>
        <property type="gene ID" value="LAX5112_00346"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006364">
        <property type="term" value="P:rRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1280.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029028">
        <property type="entry name" value="Alpha/beta_knot_MTases"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015947">
        <property type="entry name" value="PUA-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006700">
        <property type="entry name" value="rRNA_ssu_MeTrfase-E"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029026">
        <property type="entry name" value="tRNA_m1G_MTases_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30027">
        <property type="entry name" value="PTHR30027"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04452">
        <property type="entry name" value="Methyltrans_RNA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF015601">
        <property type="entry name" value="MTase_slr0722"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75217">
        <property type="entry name" value="SSF75217"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88697">
        <property type="entry name" value="SSF88697"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00046">
        <property type="entry name" value="TIGR00046"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7 11 12" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 11" id="KW-0698">rRNA processing</keyword>
    <keyword evidence="9 11" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="8 11 12" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000792"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005528"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012328"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00013673"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00025699"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRNR" id="PIRNR015601"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ64636.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="245" mass="26950" checksum="0E6E3EF48D402682" modified="2015-12-09" version="1">MQRLFLRHILADGARIEADRGQANYLLNVLRFKDGDYVLVFNGSDGEWLAKIQSSGRRACSLQLMERTRDQTAPNDLIYMFAPLKHARLDYMVQKAVEMGAGSLMPVMTQHTQSSRVNVERMEANVIEAAEQCGVLSVPTVLSPMSLKDVLTAWPEAHAGRKLLFCDEGEETNNPLLTLVQLKENGPPPLAILIGPEGGFSEDERALLKDLDFVTPIPLGPRILRADTAAVAALAVVQATVGDWK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZR84</accession>
    <name>A0A0M6ZR84_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">L-lactate dehydrogenase [cytochrome]</fullName>
            <ecNumber evidence="7">1.1.2.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">lldD_1</name>
        <name evidence="7" type="ORF">LAX5112_00337</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the FMN-dependent alpha-hydroxy acid dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.1.2.3" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64610.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670331.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00337"/>
    <dbReference type="EnsemblBacteria" id="CTQ64610">
        <property type="protein sequence ID" value="CTQ64610"/>
        <property type="gene ID" value="LAX5112_00337"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010181">
        <property type="term" value="F:FMN binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004460">
        <property type="term" value="F:L-lactate dehydrogenase (cytochrome) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd02809">
        <property type="entry name" value="alpha_hydroxyacid_oxid_FMN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012133">
        <property type="entry name" value="Alpha-hydoxy_acid_DH_FMN"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000262">
        <property type="entry name" value="FMN-dep_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037396">
        <property type="entry name" value="FMN_HAD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008259">
        <property type="entry name" value="FMN_hydac_DH_AS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01070">
        <property type="entry name" value="FMN_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000138">
        <property type="entry name" value="Al-hdrx_acd_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00557">
        <property type="entry name" value="FMN_HYDROXY_ACID_DH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51349">
        <property type="entry name" value="FMN_HYDROXY_ACID_DH_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="5" id="KW-0288">FMN</keyword>
    <keyword evidence="2 7" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FMN hydroxy acid dehydrogenase" evidence="6">
        <location>
            <begin position="1"/>
            <end position="378"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="4">
        <location>
            <position position="276"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="25"/>
        </location>
        <ligand>
            <name>glyoxylate</name>
            <dbReference type="ChEBI" id="CHEBI:36655"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="78"/>
            <end position="80"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="107"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="128"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="130"/>
        </location>
        <ligand>
            <name>glyoxylate</name>
            <dbReference type="ChEBI" id="CHEBI:36655"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="156"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="165"/>
        </location>
        <ligand>
            <name>glyoxylate</name>
            <dbReference type="ChEBI" id="CHEBI:36655"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="252"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="274"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="276"/>
        </location>
        <ligand>
            <name>glyoxylate</name>
            <dbReference type="ChEBI" id="CHEBI:36655"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="279"/>
        </location>
        <ligand>
            <name>glyoxylate</name>
            <dbReference type="ChEBI" id="CHEBI:36655"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="307"/>
            <end position="311"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="330"/>
            <end position="331"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00024042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR000138-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR000138-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51349"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ64610.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="378" mass="41940" checksum="AAD66AD656FD82A0" modified="2015-12-09" version="1">MPIVTDVADMQALAKRRVPKMFYDYADTGSWTQSTYWDNEAAFQRQKLRQRVARNIDNRSVKTTMIGQDVAMPVALAPVGLTGMQHADGEILAAQAAEEFGVPFTLSTMSVCSIEDVAEHTKNPFWFQLYVMRDRGFSENLMKRAHTAGCSALVLTLDLQVLGQRHRDIKNGLSTPPKPKPHVLVDLAFKPRWCWNMLQTKRREFGNIVGHVSGVEDMTSLAEWTASQFDPTLDWSSVEWVKKHWDRKLILKGINDVEDARIAADLGADAIVVSNHGGRQLDGALASYDILRDIVDAVGDKVEVHVDGGIRSGQDVFKAVAMGAHSTYIGRAFIYGLGAMGKPGVRQVLEIIHKELDVTMGLCGETDIKKVGRHNLVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZS57</accession>
    <name>A0A0M6ZS57_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative FAD-linked oxidoreductase</fullName>
            <ecNumber evidence="2">1.-.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00672</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.-.-.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65548.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670620.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00672"/>
    <dbReference type="EnsemblBacteria" id="CTQ65548">
        <property type="protein sequence ID" value="CTQ65548"/>
        <property type="gene ID" value="LAX5112_00672"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071949">
        <property type="term" value="F:FAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.465.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016166">
        <property type="entry name" value="FAD-bd_PCMH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036318">
        <property type="entry name" value="FAD-bd_PCMH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016169">
        <property type="entry name" value="FAD-bd_PCMH_sub2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016164">
        <property type="entry name" value="FAD-linked_Oxase-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006094">
        <property type="entry name" value="Oxid_FAD_bind_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01565">
        <property type="entry name" value="FAD_binding_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55103">
        <property type="entry name" value="SSF55103"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56176">
        <property type="entry name" value="SSF56176"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51387">
        <property type="entry name" value="FAD_PCMH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FAD-binding PCMH-type" evidence="1">
        <location>
            <begin position="42"/>
            <end position="215"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51387"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65548.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="468" mass="51541" checksum="5BC26ACD17C3A2BE" modified="2015-12-09" version="1">MSAIAALIADLDGIKIEDNPQIVKQKSRDFFWYSPVLKAQLENVTGDLIVTPKSEDEVIRILKACFAADVPVTTRGAGTGNYGQAMPLSGGVVLSLADMTAVKEVRTGSVVAEAGAIMADIDAATRAETGQELRMHPSTYRTATIGGFIAGGSGGVGSINWGGLRDLGNVIRLRVVTMEAEPQVLEMTGDELQKVMHAYGTNGIITEVEMPLTASYDWVDVLVGFDDFMDAVRFSDELANLDGLLTKNIAPVATPVPHDYFLRHQKFIRKDQSVAVLMVAPFAMAAFDAFMGRQSKGEVLYRSDKASDEDLKRLPPAYELSWNHTTLRGLRVDPSITYLQVLYPFPNQVELVGKMHEMFGDEVPGHLEYVRFDGNVTCFGLPIVRYSNEARLEEIIRLHEDNGCPIFNPHRYTLEEGGMKQTDAVQLAFKKQADPKGLLNPGKMIAWENPDYDFESGQVFLFPGLQRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSX7</accession>
    <name>A0A0M6ZSX7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">LIV-I protein F</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">livF_5</name>
        <name evidence="6" type="ORF">LAX5112_00784</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65865.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670704.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00784"/>
    <dbReference type="EnsemblBacteria" id="CTQ65865">
        <property type="protein sequence ID" value="CTQ65865"/>
        <property type="gene ID" value="LAX5112_00784"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="2"/>
            <end position="233"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="34"/>
            <end position="41"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ65865.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="233" mass="25291" checksum="9942BC54A204B7AB" modified="2015-12-09" version="1">MLTVEGLRSAYGHIEVLHGIDLEVTSKEIVTVVGANGAGKSTLLKCLSGTQAVTGGGIRFRGDALTTVPAYKRLKRGLSQSPEGRQIFTNISVEENLRLGAFLFTDDRVEKDMEDAFQMFPILREKRNLAAGGLSGGQQQMLAIARALMGRPHCLLLDEPSMGLAPLLVAQIFDVVKSLREKEVTVLLVEQNAFGALKIADRGYVMETGRITLAGHSDELIADPRIREAYLGI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTJ7</accession>
    <name>A0A0M6ZTJ7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 5 7">Histidine ammonia-lyase</fullName>
            <shortName evidence="5">Histidase</shortName>
            <ecNumber evidence="3 5 7">4.3.1.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 9" type="primary">hutH</name>
        <name evidence="9" type="ORF">LAX5112_00851</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 5 7">
            <text>L-histidine = NH4(+) + trans-urocanate</text>
            <dbReference type="Rhea" id="RHEA:21232"/>
            <dbReference type="ChEBI" id="CHEBI:17771"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="ChEBI" id="CHEBI:57595"/>
            <dbReference type="EC" id="4.3.1.3"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 5 7">Amino-acid degradation; L-histidine degradation into L-glutamate; N-formimidoyl-L-glutamate from L-histidine: step 1/3.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5 8">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="PTM">
        <text evidence="5">Contains an active site 4-methylidene-imidazol-5-one (MIO), which is formed autocatalytically by cyclization and dehydration of residues Ala-Ser-Gly.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5 6">Belongs to the PAL/histidase family.</text>
    </comment>
    <dbReference type="EC" id="4.3.1.3" evidence="3 5 7"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66048.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670753.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00851"/>
    <dbReference type="EnsemblBacteria" id="CTQ66048">
        <property type="protein sequence ID" value="CTQ66048"/>
        <property type="gene ID" value="LAX5112_00851"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00379">
        <property type="reaction ID" value="UER00549"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004397">
        <property type="term" value="F:histidine ammonia-lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019556">
        <property type="term" value="P:histidine catabolic process to glutamate and formamide"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019557">
        <property type="term" value="P:histidine catabolic process to glutamate and formate"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd00332">
        <property type="entry name" value="PAL-HAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.275.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00229">
        <property type="entry name" value="His_ammonia_lyase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001106">
        <property type="entry name" value="Aromatic_Lyase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024083">
        <property type="entry name" value="Fumarase/histidase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005921">
        <property type="entry name" value="HutH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008948">
        <property type="entry name" value="L-Aspartase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022313">
        <property type="entry name" value="Phe/His_NH3-lyase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10362">
        <property type="entry name" value="PTHR10362"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00221">
        <property type="entry name" value="Lyase_aromatic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48557">
        <property type="entry name" value="SSF48557"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01225">
        <property type="entry name" value="hutH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00488">
        <property type="entry name" value="PAL_HISTIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 5 7" id="KW-0369">Histidine metabolism</keyword>
    <keyword evidence="5 6 9" id="KW-0456">Lyase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="modified residue" description="2,3-didehydroalanine (Ser)" evidence="5">
        <location>
            <position position="144"/>
        </location>
    </feature>
    <feature type="cross-link" description="5-imidazolinone (Ala-Gly)" evidence="5">
        <location>
            <begin position="143"/>
            <end position="145"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005113"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012994"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003954"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU004479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU004480"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ66048.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="518" mass="54430" checksum="11AB8EFB6E0C06C6" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTS3</accession>
    <name>A0A0M6ZTS3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">LIV-I protein H</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">livH_2</name>
        <name evidence="7" type="ORF">LAX5112_00418</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
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            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64833.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670387.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00418"/>
    <dbReference type="EnsemblBacteria" id="CTQ64833">
        <property type="protein sequence ID" value="CTQ64833"/>
        <property type="gene ID" value="LAX5112_00418"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
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        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001851">
        <property type="entry name" value="ABC_transp_permease"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02653">
        <property type="entry name" value="BPD_transp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="6"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="45"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="68"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="96"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="144"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="190"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="266"/>
            <end position="285"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ64833.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="290" mass="31001" checksum="7C2C387DEB59DD75" modified="2015-12-09" version="1">MDLFELLNFYVIPGIVLGSIYALGAVGITLIFAILRYAHLAHGDLATLGAFIALAVVTTLGVSPLAALPIAIIATAAVAVGIDKVFYDHLRERPKIVTVMASLGIALMIRAVVQVVWGVDTETYSRGIVRPENYFGLRIRDREIYTVIAMLALVGVLHVFLTQSKWGKAMRAMSDNPNLALLSGIDNRKVIILTWVIAGGLCAASGFFLGLNTELKSMMGWHMLLPMFAAAILGGVGRVEGAVLGGLIVGIAEELSVLVIPSEYKAAMAFAILLFMLLVRPTGLLKGKVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTS6</accession>
    <name>A0A0M6ZTS6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Aminopeptidase YpdE</fullName>
            <ecNumber evidence="7">3.4.11.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ypdE</name>
        <name evidence="7" type="ORF">LAX5112_00699</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase M42 family.</text>
    </comment>
    <dbReference type="EC" id="3.4.11.-" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65621.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670638.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00699"/>
    <dbReference type="EnsemblBacteria" id="CTQ65621">
        <property type="protein sequence ID" value="CTQ65621"/>
        <property type="gene ID" value="LAX5112_00699"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004177">
        <property type="term" value="F:aminopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.30.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008007">
        <property type="entry name" value="Peptidase_M42"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023367">
        <property type="entry name" value="Peptidase_M42_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017537">
        <property type="entry name" value="Peptidase_M42_hydrolase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05343">
        <property type="entry name" value="Peptidase_M42"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03106">
        <property type="entry name" value="trio_M42_hydro"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 7" id="KW-0031">Aminopeptidase</keyword>
    <keyword evidence="5 7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3" id="KW-0645">Protease</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="360"/>
            <end position="388"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006272"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ65621.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="388" mass="42374" checksum="A1440E8E255CB032" modified="2015-12-09" version="1">MTLLNIDIDYLAKTLRSLLEVPSPTGYTDELARFVSKELERLGVFYEVTRRGAIRARLDGAKSKPARAFVAHLDTLGAQVKTLKENGRLELVPIGHWSARFAEGARTTIFSESGAYTGTILPLKASGHTFNEGIDNLPVGWDYVELRVDAYSKTADDLHRLGIDIGDIVAIDPAPEFLENGFIVSRHLDNKAGVAVMLAALKAMVESETKPTVDIFWLFTIAEETGHGATSILTPDIASLVAIDNGTSAPGQNSDEFGVTIAMADQTGPFDYHLTRKMAQLCRDNEIKFQKDVFRYYRSDAASAIEAGADVRTALITFGIDASHGYERIHMHALRSLAELCTGYALSPVEIKRDAREFAGMKGFTTQPTEDADQDLSPETEEPGAEAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVM4</accession>
    <name>A0A0M6ZVM4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Cation efflux system protein CzcA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">czcA_2</name>
        <name evidence="2" type="ORF">LAX5112_00682</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65574.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670627.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00682"/>
    <dbReference type="EnsemblBacteria" id="CTQ65574">
        <property type="protein sequence ID" value="CTQ65574"/>
        <property type="gene ID" value="LAX5112_00682"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.2090.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027463">
        <property type="entry name" value="AcrB_DN_DC_subdom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001036">
        <property type="entry name" value="Acrflvin-R"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32063">
        <property type="entry name" value="PTHR32063"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00873">
        <property type="entry name" value="ACR_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00702">
        <property type="entry name" value="ACRIFLAVINRP"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82714">
        <property type="entry name" value="SSF82714"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="330"/>
            <end position="349"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="354"/>
            <end position="373"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="385"/>
            <end position="408"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="429"/>
            <end position="451"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="457"/>
            <end position="474"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="533"/>
            <end position="551"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="867"/>
            <end position="886"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="893"/>
            <end position="913"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="919"/>
            <end position="944"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="956"/>
            <end position="980"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="992"/>
            <end position="1019"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65574.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="1053" mass="114859" checksum="A35151CDA3B919B0" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVY6</accession>
    <name>A0A0M6ZVY6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">VIT family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">LAX5112_00956</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66406.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670876.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00956"/>
    <dbReference type="EnsemblBacteria" id="CTQ66406">
        <property type="protein sequence ID" value="CTQ66406"/>
        <property type="gene ID" value="LAX5112_00956"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005384">
        <property type="term" value="F:manganese ion transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030026">
        <property type="term" value="P:cellular manganese ion homeostasis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008217">
        <property type="entry name" value="Ccc1_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31851">
        <property type="entry name" value="PTHR31851"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01988">
        <property type="entry name" value="VIT1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="31"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="160"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="183"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="213"/>
            <end position="234"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ66406.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="244" mass="26293" checksum="98A28A3D90B15DE7" modified="2015-12-09" version="1">MPNRPLEHSHQPNDIADRLARGPDTSYLRDWVYGGIDGAVTTFAIVAGSVGANLSTRIILILGVANLLADGFSMAAANYSGSKSENEDFQRLRAIEEKHIRVEPDGEREEIRQIFKAKGYEGDDLEDIVRLVTSNRTTWIETMMLAEYGVSDGGRAPMKAALYTFAAFVLFGALPLLPFLADIQASAVLASGLTACAFFAIGSLRARWSQRHWVGCGIETTAIGMVAAAIAFLAGHGLQQVFGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZW35</accession>
    <name>A0A0M6ZW35_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Putative HTH-type transcriptional regulator YdfH</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ydfH_3</name>
        <name evidence="5" type="ORF">LAX5112_01163</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66975.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01163"/>
    <dbReference type="EnsemblBacteria" id="CTQ66975">
        <property type="protein sequence ID" value="CTQ66975"/>
        <property type="gene ID" value="LAX5112_01163"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07377">
        <property type="entry name" value="WHTH_GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.530">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011711">
        <property type="entry name" value="GntR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008920">
        <property type="entry name" value="TF_FadR/GntR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000524">
        <property type="entry name" value="Tscrpt_reg_HTH_GntR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07729">
        <property type="entry name" value="FCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00392">
        <property type="entry name" value="GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00035">
        <property type="entry name" value="HTHGNTR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00895">
        <property type="entry name" value="FCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00345">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48008">
        <property type="entry name" value="SSF48008"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50949">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH gntR-type" evidence="4">
        <location>
            <begin position="15"/>
            <end position="82"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ66975.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="230" mass="25875" checksum="A6EC61C432D45180" modified="2015-12-09" version="1">MRAENRCVYVSGMDRKRADLIADELEGFILEGTFKDGARLDEVQLAERFDVSRTPVREALQRLSQSGLVEQIPRRGVFVRQPGPVELLEMFEVMAELEAVCARLAASRISDQALADLHAANARCDEAVVAQDTDGYYLENERFHAILYRQSGNGFLEQECLRLYRRLQPFRRMQLRARGRLPQSMAEHKAIVTALEKADGEAAAAAIRGHVAVQGEKFHHLMASLKHAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZW47</accession>
    <name>A0A0M6ZW47_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Cystine transporter subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_00978</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66466.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00978"/>
    <dbReference type="EnsemblBacteria" id="CTQ66466">
        <property type="protein sequence ID" value="CTQ66466"/>
        <property type="gene ID" value="LAX5112_00978"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="domain" description="PBPb" evidence="2">
        <location>
            <begin position="41"/>
            <end position="257"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00497"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ66466.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="279" mass="30677" checksum="94C7E0959D818265" modified="2015-12-09" version="1">MGQSIKPRRRGGLFAFLVVFSGVLFAGGPAYSSCDVLKVNGANEWRPFSWRTPELGEMKGIFPAIIHHVSKTVPVRSEYGPDLPWNRLFALLEHGSIDVLAGAYLSAERQNKFELSHPVHEDEVTVFIRAGMKAKPDGLDGLIGLRGRAPYGVHLGEDNNKFAADNLVIDSQSLDDIAGDLEMLTDGRFDYILMSRSYGKKAVSTFGFDGQIEDVPWTAARRSVHFMFSKESPCVTLLPEFNAVIDEQLQAGFLDEFQTGFDTAGGFKNTPPSADTIAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWP0</accession>
    <name>A0A0M6ZWP0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01250</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67178.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67178">
        <property type="protein sequence ID" value="CTQ67178"/>
        <property type="gene ID" value="LAX5112_01250"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="45"/>
            <end position="66"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67178.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="226" mass="24767" checksum="44367D21E9F85660" modified="2015-12-09" version="1">MLIWMAASAVLVTGGPVLWMLLDNVCTLSTSLGNGESVNQCYTRWIGALSGWAAAAGALAAAIWTVRSIRRQMALQALQHRRDALKAELEMYTGPANALVSVMKAGNFILLEANSMGDSPNPKRLETFTKTIKGPDGILLLEAYTSQVSPQHASDAQWIKIRAEGLACITLDDEETLKKEIWLYTAAAPRVLEKLEASDEAFRDFHQKTTATVLEIDNKIAEYERG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXK4</accession>
    <name>A0A0M6ZXK4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Diguanylate cyclase DosC</fullName>
            <ecNumber evidence="3">2.7.7.65</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">dosC</name>
        <name evidence="3" type="ORF">LAX5112_01079</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.7.7.65" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66750.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01079"/>
    <dbReference type="EnsemblBacteria" id="CTQ66750">
        <property type="protein sequence ID" value="CTQ66750"/>
        <property type="gene ID" value="LAX5112_01079"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052621">
        <property type="term" value="F:diguanylate cyclase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd01949">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000160">
        <property type="entry name" value="GGDEF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_repeat"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00990">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00267">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00028">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="SSF48452"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00254">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50887">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="GGDEF" evidence="2">
        <location>
            <begin position="444"/>
            <end position="577"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="383"/>
            <end position="410"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ66750.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="583" mass="65544" checksum="14D30EC5EF931B5F" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXS1</accession>
    <name>A0A0M6ZXS1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01203</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67077.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671042.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67077">
        <property type="protein sequence ID" value="CTQ67077"/>
        <property type="gene ID" value="LAX5112_01203"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67077.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="79" mass="8906" checksum="8ABA8B99684B5F41" modified="2015-12-09" version="1">MSAFLGLLAAIAQKVLVGIAGEFLRQKRHDRAVGANTLLKAQIRSRKAIDRAKKISERRDLGAVRDRLRERARKRSTKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYD1</accession>
    <name>A0A0M6ZYD1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01003</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66533.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ66533">
        <property type="protein sequence ID" value="CTQ66533"/>
        <property type="gene ID" value="LAX5112_01003"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="25"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66533.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="30" mass="3452" checksum="753FDCC96C266AAB" modified="2015-12-09" version="1">MVDPFTQFTIYHLVVVVAIVMLLIFRAISD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYR8</accession>
    <name>A0A0M6ZYR8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Methyl-accepting chemotaxis protein 4</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">mcp4_3</name>
        <name evidence="8" type="ORF">LAX5112_01348</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the methyl-accepting chemotaxis (MCP) protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67356.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671163.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67356">
        <property type="protein sequence ID" value="CTQ67356"/>
        <property type="gene ID" value="LAX5112_01348"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004089">
        <property type="entry name" value="MCPsignal_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000727">
        <property type="entry name" value="T_SNARE_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00015">
        <property type="entry name" value="MCPsignal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00283">
        <property type="entry name" value="MA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50111">
        <property type="entry name" value="CHEMOTAXIS_TRANSDUC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50192">
        <property type="entry name" value="T_SNARE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 3" id="KW-0807">Transducer</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="20"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="442"/>
            <end position="464"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="7">
        <location>
            <begin position="466"/>
            <end position="519"/>
        </location>
    </feature>
    <feature type="domain" description="Methyl-accepting transducer" evidence="5">
        <location>
            <begin position="559"/>
            <end position="795"/>
        </location>
    </feature>
    <feature type="domain" description="T-SNARE coiled-coil homology" evidence="6">
        <location>
            <begin position="711"/>
            <end position="773"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023224"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00029447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ67356.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="815" mass="85495" checksum="7260759631E5A724" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZ02</accession>
    <name>A0A0M6ZZ02_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Membrane-bound lytic murein transglycosylase B</fullName>
            <ecNumber evidence="4">4.2.2.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">mltB_1</name>
        <name evidence="4" type="ORF">LAX5112_01080</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="4.2.2.-" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66753.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670952.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01080"/>
    <dbReference type="EnsemblBacteria" id="CTQ66753">
        <property type="protein sequence ID" value="CTQ66753"/>
        <property type="gene ID" value="LAX5112_01080"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.101.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023346">
        <property type="entry name" value="Lysozyme-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043426">
        <property type="entry name" value="MltB-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011970">
        <property type="entry name" value="MltB_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002477">
        <property type="entry name" value="Peptidoglycan-bd-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036365">
        <property type="entry name" value="PGBD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036366">
        <property type="entry name" value="PGBDSf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031304">
        <property type="entry name" value="SLT_2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30163">
        <property type="entry name" value="PTHR30163"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01471">
        <property type="entry name" value="PG_binding_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13406">
        <property type="entry name" value="SLT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47090">
        <property type="entry name" value="SSF47090"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53955">
        <property type="entry name" value="SSF53955"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02283">
        <property type="entry name" value="MltB_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0456">Lyase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809145" evidence="1">
        <location>
            <begin position="30"/>
            <end position="399"/>
        </location>
    </feature>
    <feature type="domain" description="SLT_2" evidence="3">
        <location>
            <begin position="31"/>
            <end position="320"/>
        </location>
    </feature>
    <feature type="domain" description="PG_binding_1" evidence="2">
        <location>
            <begin position="342"/>
            <end position="389"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF13406"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ66753.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="399" mass="43693" checksum="DCDD1780CDFE649E" modified="2015-12-09" version="1">MRRRSSGVFSSVMMLAVLGTASLATPALAIESCVASLKQQAISAGVRPEVAQKMLSGAKYDEKVIRFSTAQPEFKTEIWDYMAFLVDPQRIQDGKANLKKHARTLDAVEKRYGVDKHIVLAVWGVESDYGNFRGDFYTPHALANLVCAGKRRQKYFRGELMKTLQIASRGDVRMEDFKGSWAGAFGQTQFMPTTFASLAVDFDGDGRKDLVNSVPDALASTANFLKNAGWRNSRLWGFEVKVPKGYSGPSGRKNYASMSTWTKRGLRNLDGSTFKSKADTALIRPAGANGPAFLVTRNFKALRSYNASTSYGLAIAVLSELVSGGDPIMTPWPTDNPGLSRAQRLELQKLLNKNGFNVGEPDGKVGPMTRKGIRAAEAKYGMPVTGRPSWNVYYALGGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZ06</accession>
    <name>A0A0M6ZZ06_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">4-hydroxy-tetrahydrodipicolinate synthase</fullName>
            <ecNumber evidence="2">4.3.3.7</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">dapA_4</name>
        <name evidence="2" type="ORF">LAX5112_01418</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the DapA family.</text>
    </comment>
    <dbReference type="EC" id="4.3.3.7" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67531.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671249.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01418"/>
    <dbReference type="EnsemblBacteria" id="CTQ67531">
        <property type="protein sequence ID" value="CTQ67531"/>
        <property type="gene ID" value="LAX5112_01418"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008840">
        <property type="term" value="F:4-hydroxy-tetrahydrodipicolinate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002220">
        <property type="entry name" value="DapA-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020624">
        <property type="entry name" value="Schiff_base-form_aldolases_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12128">
        <property type="entry name" value="PTHR12128"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00701">
        <property type="entry name" value="DHDPS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001365">
        <property type="entry name" value="DHDPS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00146">
        <property type="entry name" value="DHPICSNTHASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM01130">
        <property type="entry name" value="DHDPS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00665">
        <property type="entry name" value="DHDPS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 2" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRNR" id="PIRNR001365"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67531.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="305" mass="33298" checksum="B48D378BE4F116CB" modified="2015-12-09" version="1">MTPRLTFEGIYTPAVTPYDTDGNVVWDALEKVIDHLVASGVHGVISGGSTGENYTQTVEERLELARFTKDKLAGRLPLIVGTGTMRTPDSIALAEGAAKMDAEAILVATPPYAVPTERENALNVLTIDRAADLPVMLYNYPGRMGVNMGEEFLDRVGRSRNVCAIKESSGDINRVHLLARDYPHIQMSCGMDDQALEFFAWGARSWVCAGSNFLPEEHVALYKACAIEGDFTKGRKIMSAMMPLMRVLEQGGKFIQCVKHGVEMSGLYAGPPRPPLKALNKDDKRQLEQVVRVLKSTIADITAGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0V8</accession>
    <name>A0A0M7A0V8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">NTP_transf_9 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01835</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68668.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671548.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ68668">
        <property type="protein sequence ID" value="CTQ68668"/>
        <property type="gene ID" value="LAX5112_01835"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.170.150.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007361">
        <property type="entry name" value="DUF427"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038694">
        <property type="entry name" value="DUF427_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04248">
        <property type="entry name" value="NTP_transf_9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NTP_transf_9" evidence="1">
        <location>
            <begin position="26"/>
            <end position="114"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04248"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68668.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="156" mass="17400" checksum="8240E6A4E32C648A" modified="2015-12-09" version="1">MDLPIENVQSYPRPPIVEPVPQRILVVLGSVEIVDTTRALRVLETHHPPTYYIPPEDVKAHLRRLPQSTLCEWKGAATYFDVSAGTRTARAAAWCYSLPTAEFQSLKDHLAFYPGKMDLCQVGSERVDPQAGKFYGGWVTPNLQGMPKGAPGTEHW</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0W1</accession>
    <name>A0A0M7A0W1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Protein HflC</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">hflC</name>
        <name evidence="6" type="ORF">LAX5112_01618</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">HflC and HflK could regulate a protease.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the band 7/mec-2 family. HflC subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68052.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008191269.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01618"/>
    <dbReference type="EnsemblBacteria" id="CTQ68052">
        <property type="protein sequence ID" value="CTQ68052"/>
        <property type="gene ID" value="LAX5112_01618"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008233">
        <property type="term" value="F:peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052547">
        <property type="term" value="P:regulation of peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03405">
        <property type="entry name" value="SPFH_HflC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.479.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001107">
        <property type="entry name" value="Band_7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036013">
        <property type="entry name" value="Band_7/SPFH_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010200">
        <property type="entry name" value="HflC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001972">
        <property type="entry name" value="Stomatin_HflK_HflKC_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42911">
        <property type="entry name" value="PTHR42911"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01145">
        <property type="entry name" value="Band_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005651">
        <property type="entry name" value="HflC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00721">
        <property type="entry name" value="STOMATIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00244">
        <property type="entry name" value="PHB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF117892">
        <property type="entry name" value="SSF117892"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0645">Protease</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="5"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="domain" description="PHB" evidence="5">
        <location>
            <begin position="19"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="285"/>
            <end position="309"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007862"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRNR" id="PIRNR005651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM00244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ68052.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="309" mass="34500" checksum="F64D52EA0B20F728" modified="2015-12-09" version="1">MRSGIFGIVVVVLGFLLYTSIFVVNPTQQALVLQLGRVDRVIQEPGPQLKYPFVQNVVYLDKRILDLDMSPQEVIAADLKRLVVDAFARYRISNPVLFYQRVNNIRTANQRLSTFLQSSLRSELGKASFEAIVRDDRSGLMELIRQEVSQAAAELGIEVVDVKIRRADLPDANSQAIFARMQTERQREATEIRAQGEEQSRRIRSRADRDATVLVAEANRDSEIIRGDGDAERNKIFAQAFGADPEFFAFYRSMQAYEAGLQAGDTSLVLSPDSSFFRFFKDPTGVNAPANGSGSDDVEDIRSPSLAAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A198</accession>
    <name>A0A0M7A198_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">C signal</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">csgA_1</name>
        <name evidence="1" type="ORF">LAX5112_01810</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68619.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671531.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01810"/>
    <dbReference type="EnsemblBacteria" id="CTQ68619">
        <property type="protein sequence ID" value="CTQ68619"/>
        <property type="gene ID" value="LAX5112_01810"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ68619.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="229" mass="24393" checksum="AB53FD4915C76FB2" modified="2015-12-09" version="1">MGTLAIVIGATGGIGSALVRVLDESGPYDRVVGLSRRTHPGLDLLDETSIQAAAKWVAGQGDDLRLVFDATGALMLGDRKPEKSLRELDPQALAESYAINAIGPALVMKHFLPLLPKDGKSVFATLSARVGSISDNNLGGWYGYRASKAALNQLVRTASIELARRKPHAVCVALHPGTVRTPLTEGFVKSGLEVQAPEKAAERLLTVINGLTPAETGGYFDHMGERIEW</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1V6</accession>
    <name>A0A0M7A1V6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Cyclic di-GMP phosphodiesterase Gmr</fullName>
            <ecNumber evidence="5">3.1.4.52</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">gmr_7</name>
        <name evidence="5" type="ORF">LAX5112_01794</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.4.52" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68577.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671519.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01794"/>
    <dbReference type="EnsemblBacteria" id="CTQ68577">
        <property type="protein sequence ID" value="CTQ68577"/>
        <property type="gene ID" value="LAX5112_01794"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071111">
        <property type="term" value="F:cyclic-guanylate-specific phosphodiesterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01948">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01949">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00130">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.450">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001633">
        <property type="entry name" value="EAL_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035919">
        <property type="entry name" value="EAL_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000160">
        <property type="entry name" value="GGDEF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001610">
        <property type="entry name" value="PAC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000014">
        <property type="entry name" value="PAS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000700">
        <property type="entry name" value="PAS-assoc_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035965">
        <property type="entry name" value="PAS-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013767">
        <property type="entry name" value="PAS_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00563">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00990">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00989">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13426">
        <property type="entry name" value="PAS_9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00052">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00267">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00086">
        <property type="entry name" value="PAC"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SMART" id="SM00091">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141868">
        <property type="entry name" value="SSF141868"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55785">
        <property type="entry name" value="SSF55785"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00254">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00229">
        <property type="entry name" value="sensory_box"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50883">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50887">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50113">
        <property type="entry name" value="PAC"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50112">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PAC" evidence="2">
        <location>
            <begin position="208"/>
            <end position="263"/>
        </location>
    </feature>
    <feature type="domain" description="PAS" evidence="1">
        <location>
            <begin position="260"/>
            <end position="305"/>
        </location>
    </feature>
    <feature type="domain" description="PAC" evidence="2">
        <location>
            <begin position="332"/>
            <end position="386"/>
        </location>
    </feature>
    <feature type="domain" description="PAS" evidence="1">
        <location>
            <begin position="380"/>
            <end position="428"/>
        </location>
    </feature>
    <feature type="domain" description="PAC" evidence="2">
        <location>
            <begin position="460"/>
            <end position="512"/>
        </location>
    </feature>
    <feature type="domain" description="GGDEF" evidence="4">
        <location>
            <begin position="675"/>
            <end position="810"/>
        </location>
    </feature>
    <feature type="domain" description="EAL" evidence="3">
        <location>
            <begin position="819"/>
            <end position="1073"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50112"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50113"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ68577.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="1084" mass="119540" checksum="9653A3E7291CC21F" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A262</accession>
    <name>A0A0M7A262_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">DNA-directed RNA polymerase subunit beta'</fullName>
            <shortName evidence="8">RNAP subunit beta'</shortName>
            <ecNumber evidence="8">2.7.7.6</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">RNA polymerase subunit beta'</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="8">Transcriptase subunit beta'</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8 12" type="primary">rpoC</name>
        <name evidence="12" type="ORF">LAX5112_01718</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8 9">DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7 8 9">
            <text>a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate + RNA(n+1)</text>
            <dbReference type="Rhea" id="RHEA:21248"/>
            <dbReference type="Rhea" id="RHEA-COMP:14527"/>
            <dbReference type="Rhea" id="RHEA-COMP:17342"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:61557"/>
            <dbReference type="ChEBI" id="CHEBI:140395"/>
            <dbReference type="EC" id="2.7.7.6"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="8">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="8">Binds 1 Mg(2+) ion per subunit.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="8">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="8">Binds 2 Zn(2+) ions per subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="8">The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription.</text>
    </comment>
    <comment type="similarity">
        <text evidence="8 9">Belongs to the RNA polymerase beta' chain family.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.6" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68380.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671476.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01718"/>
    <dbReference type="EnsemblBacteria" id="CTQ68380">
        <property type="protein sequence ID" value="CTQ68380"/>
        <property type="gene ID" value="LAX5112_01718"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000428">
        <property type="term" value="C:DNA-directed RNA polymerase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003899">
        <property type="term" value="F:DNA-directed 5'-3' RNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
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        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006351">
        <property type="term" value="P:transcription, DNA-templated"/>
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        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
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    </dbReference>
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        <property type="match status" value="2"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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    <dbReference type="InterPro" id="IPR012754">
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    <dbReference type="InterPro" id="IPR000722">
        <property type="entry name" value="RNA_pol_asu"/>
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    <dbReference type="InterPro" id="IPR006592">
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    </dbReference>
    <dbReference type="InterPro" id="IPR007080">
        <property type="entry name" value="RNA_pol_Rpb1_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007066">
        <property type="entry name" value="RNA_pol_Rpb1_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042102">
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    </dbReference>
    <dbReference type="InterPro" id="IPR044893">
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    </dbReference>
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    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04997">
        <property type="entry name" value="RNA_pol_Rpb1_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00623">
        <property type="entry name" value="RNA_pol_Rpb1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04983">
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05000">
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04998">
        <property type="entry name" value="RNA_pol_Rpb1_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00663">
        <property type="entry name" value="RPOLA_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02386">
        <property type="entry name" value="rpoC_TIGR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 8 9" id="KW-0240">DNA-directed RNA polymerase</keyword>
    <keyword evidence="8" id="KW-0460">Magnesium</keyword>
    <keyword evidence="4 8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3 8 9" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 8 9" id="KW-0804">Transcription</keyword>
    <keyword evidence="2 8 9" id="KW-0808">Transferase</keyword>
    <keyword evidence="5 8" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="RPOLA_N" evidence="11">
        <location>
            <begin position="237"/>
            <end position="516"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="1378"/>
            <end position="1399"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="71"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="73"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>1</label>
        </ligand>
    </feature>
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        <location>
            <position position="86"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="89"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="462"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="464"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="466"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="811"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="885"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="892"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="895"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>2</label>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00024550"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01322"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU004279"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="SMART" id="SM00663"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ68380.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="1399" mass="154939" checksum="BE3AF14A3CDE8153" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2B1</accession>
    <name>A0A0M7A2B1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01541</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67843.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67843">
        <property type="protein sequence ID" value="CTQ67843"/>
        <property type="gene ID" value="LAX5112_01541"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="26"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="72"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="123"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="152"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="196"/>
            <end position="222"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="234"/>
            <end position="264"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67843.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="287" mass="31510" checksum="170F27EA308E4D2E" modified="2015-12-09" version="1">MIEKLERALALGAACWKVLLLDKEMLFFPIMSALALALVIGSGGWAIYTTPELQAFFQSIFDSEQPDQDPRFWALMFVFLFINYFIMIFFNAALLGCALIRFAGGDPTVMDGLSLSMRRLPQILLWALVTAFVGWVLQLLESRLKGLMRFFINLLGAGWAVATYFAVPILVVDGVGPVTAIKRSVQAVRKTWGEALIGHIGLGALNFLVLIVAMPILMLGIFSFEQNPALGSGLATVGVTLILVGSLVVTTLSAILRAALYIYAVEGEMPLNFDSRLIRNAFQPDKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2E5</accession>
    <name>A0A0M7A2E5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01825</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68652.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ68652">
        <property type="protein sequence ID" value="CTQ68652"/>
        <property type="gene ID" value="LAX5112_01825"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68652.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="44" mass="4722" checksum="3F0772D117DD3211" modified="2015-12-09" version="1">MDENVQKSCWSVTLWTVGAVGIALAMVLLFNDVDNAKQAVAIAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2Z2</accession>
    <name>A0A0M7A2Z2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Iron-sulfur cluster carrier protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">minD_3</name>
        <name evidence="8" type="ORF">LAX5112_01956</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the Mrp/NBP35 ATP-binding proteins family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">In the C-terminal section; belongs to the Mrp/NBP35 ATP-binding proteins family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">In the N-terminal section; belongs to the MIP18 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68977.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671638.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01956"/>
    <dbReference type="EnsemblBacteria" id="CTQ68977">
        <property type="protein sequence ID" value="CTQ68977"/>
        <property type="gene ID" value="LAX5112_01956"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140663">
        <property type="term" value="F:ATP-dependent FeS chaperone activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016226">
        <property type="term" value="P:iron-sulfur cluster assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.130">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02040">
        <property type="entry name" value="Mrp_NBP35"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034904">
        <property type="entry name" value="FSCA_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002744">
        <property type="entry name" value="MIP18-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019591">
        <property type="entry name" value="Mrp/NBP35_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000808">
        <property type="entry name" value="Mrp_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044304">
        <property type="entry name" value="NUBPL-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033756">
        <property type="entry name" value="YlxH/NBP35"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42961">
        <property type="entry name" value="PTHR42961"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01883">
        <property type="entry name" value="FeS_assembly_P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10609">
        <property type="entry name" value="ParA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF117916">
        <property type="entry name" value="SSF117916"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01215">
        <property type="entry name" value="MRP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="8" id="KW-0132">Cell division</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-0408">Iron</keyword>
    <keyword evidence="5" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3 5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FeS_assembly_P" evidence="7">
        <location>
            <begin position="6"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="82"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="6">
        <location>
            <begin position="88"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="128"/>
            <end position="135"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008205"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02040"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF01883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ68977.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="382" mass="39959" checksum="F837808EC83D4B54" modified="2015-12-09" version="1">MSETIKSAVMDRLRQIKGPDLEGDIVSLGLVSDVFVSDGRVAFSITVPAARAQELEPLRQAAEKVVKEVDGVENAMVALTAERAPGSAPARPPQPAPAPRTPKPPQEEQASAKPGVPGIKHIVAVASGKGGVGKSTTTANLALGMAANGLKVGVLDADIYGPSVPRLFNVSGRPEALSGRMLKPLEGYGVKVMSMGFMVEEETPMIWRGPMVISALTQMLREVAWGELDVLVVDMPPGTGDAQLTMAQQVPLAGAVIVSTPQDLALIDARKGLAMFKKVDVPVLGIVENMSYFLCPDCGSRHDIFGHGGARADAERLGVPFLGEVPLAMKIRETSDAGTPIVVSDPESQSAQIYKEIAGKVMAGIEGGTDGADRAAPAIVFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A390</accession>
    <name>A0A0M7A390_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Putative malonic semialdehyde reductase RutE</fullName>
            <ecNumber evidence="6">1.1.1.298</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">rutE_2</name>
        <name evidence="6" type="ORF">LAX5112_02150</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.1.1.298" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69535.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02150"/>
    <dbReference type="EnsemblBacteria" id="CTQ69535">
        <property type="protein sequence ID" value="CTQ69535"/>
        <property type="gene ID" value="LAX5112_02150"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035527">
        <property type="term" value="F:3-hydroxypropionate dehydrogenase (NADP+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd02148">
        <property type="entry name" value="RutE-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.109.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029479">
        <property type="entry name" value="Nitroreductase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000415">
        <property type="entry name" value="Nitroreductase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023936">
        <property type="entry name" value="RutE-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00881">
        <property type="entry name" value="Nitroreductase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55469">
        <property type="entry name" value="SSF55469"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="2" id="KW-0288">FMN</keyword>
    <keyword evidence="3" id="KW-0521">NADP</keyword>
    <keyword evidence="4 6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nitroreductase" evidence="5">
        <location>
            <begin position="38"/>
            <end position="180"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00881"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ69535.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="218" mass="24535" checksum="A866DBE848E72BC1" modified="2015-12-09" version="1">MSDADLAADAAAREAARAMQLENLRADETTLRLLFTEARTHYGWQDQDVPDEVLKDLYEIAKMGPTSMNQQPMRVVFIRSDDAKDRLEPALMEANRPKMRSAPITAIIAYDLNFWEELPKVFPPNPAAQDIFRNNATAAQVNAFRNGTLQGAYFMLAARAVGLDVGAMSGFDNVKVDEEFFHGTSLKSNFLVNLGYADTDRVFRRLPRFDYTDVCQTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3N0</accession>
    <name>A0A0M7A3N0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02013</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69181.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671708.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ69181">
        <property type="protein sequence ID" value="CTQ69181"/>
        <property type="gene ID" value="LAX5112_02013"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009593">
        <property type="entry name" value="DUF1203"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06718">
        <property type="entry name" value="DUF1203"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF034110">
        <property type="entry name" value="DUF1203"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ69181.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="156" mass="17341" checksum="49844723C1D55094" modified="2015-12-09" version="1">MFQIQPLPADNFSGLNGLSDAELSERGVQVHISDGGFPCRVSLQDVTAGERVFLLNFEHQPGKSPYRSRHAIFVKEGAEEAHLDQGDIPASIKSRLLSVRAFNEAHEIVDAEIIEGTEVQDLIARFFENTAVDYIHLHYARRGCFAARVARPEPKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4I9</accession>
    <name>A0A0M7A4I9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Ammonia transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">amt</name>
        <name evidence="11" type="ORF">LAX5112_02249</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ammonia transporter channel (TC 1.A.11.2) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69789.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008190490.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02249"/>
    <dbReference type="EnsemblBacteria" id="CTQ69789">
        <property type="protein sequence ID" value="CTQ69789"/>
        <property type="gene ID" value="LAX5112_02249"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008519">
        <property type="term" value="F:ammonium transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3430.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029020">
        <property type="entry name" value="Ammonium/urea_transptr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018047">
        <property type="entry name" value="Ammonium_transpt_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019879">
        <property type="entry name" value="Ammonium_transptr_marine"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024041">
        <property type="entry name" value="NH4_transpt_AmtB-like_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00909">
        <property type="entry name" value="Ammonium_transp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03644">
        <property type="entry name" value="marine_trans_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01219">
        <property type="entry name" value="AMMONIUM_TRANSP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0924">Ammonia transport</keyword>
    <keyword evidence="6 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0732">Signal</keyword>
    <keyword evidence="4 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="9">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809231" evidence="9">
        <location>
            <begin position="25"/>
            <end position="442"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="40"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="83"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="134"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="159"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="194"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="236"/>
            <end position="253"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="273"/>
            <end position="292"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="299"/>
            <end position="317"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="323"/>
            <end position="345"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="352"/>
            <end position="372"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="384"/>
            <end position="405"/>
        </location>
    </feature>
    <feature type="domain" description="Ammonium_transp" evidence="10">
        <location>
            <begin position="46"/>
            <end position="432"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023177"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF00909"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ69789.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="442" mass="46273" checksum="179D2E7ED40C97AA" modified="2015-12-09" version="1">MKKLVAKGAASLALLSLSALPVLAQDTEAAPAVTPEVAYIFNTLLFLIGGFLVMWMAAGFAMLEAGLVRSKNVSMQCLKNISLYSIAGLMFWITGYNLMYTGVDGGFMGSFGPYSFDPVGGDALDTGYSTASDWFFQMVFVATAASIVSGTLAERIKLWPFLIFTVVLTGFIYPIAGSWQWGAGWLSEMGFSDFAGSTLVHSVGGWAALAGAIILGARKGKYGTDGAVHPMPGSSMPLATLGTFILWLGWFGFNGASQLAMGSIGDVSDISRIFANTNMAAAAGVVAAVILTQVMYKKVDVTMALNGALAGLVSITAEPLAPSVWQAVFIGAIGGVIVVFTVPLLDKLKIDDVVGAIPVHLIAGIWGTLIVPLSNDGASYGTQIVGIVSYGVFTLVASGIVWFILKAAMGIRVSEEEEALGLDKVEVGVEAYPEFGTGSQRM</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4M2</accession>
    <name>A0A0M7A4M2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Neu5Ac permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">siaT_16</name>
        <name evidence="8" type="ORF">LAX5112_02115</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69442.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008191393.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02115"/>
    <dbReference type="EnsemblBacteria" id="CTQ69442">
        <property type="protein sequence ID" value="CTQ69442"/>
        <property type="gene ID" value="LAX5112_02115"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007387">
        <property type="entry name" value="TRAP_DctQ"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35011">
        <property type="entry name" value="PTHR35011"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04290">
        <property type="entry name" value="DctQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="15"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="48"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="86"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="128"/>
            <end position="147"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ69442.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="171" mass="19472" checksum="13AD40CA608CF09B" modified="2015-12-09" version="1">MSSVLQAVDKNGERWLLLLFYVMLVLTMFIEVVRREVFAYSSIWGEEIVRYSFIYLAWIGAAAAVKERGHIRIDVLMQYVGPKAKALLYILGDIVMAVVAVIAFYWSLETVLVSAKFGSVTHGLRISQVWFLSAVPLGFALILFRLAQSFLRDIRDLRDGKPVYEGDKLFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4Q6</accession>
    <name>A0A0M7A4Q6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Bacterial regulatory proteins, tetR family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02040</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69240.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671725.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ69240">
        <property type="protein sequence ID" value="CTQ69240"/>
        <property type="gene ID" value="LAX5112_02040"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036271">
        <property type="entry name" value="Tet_transcr_reg_TetR-rel_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00440">
        <property type="entry name" value="TetR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00455">
        <property type="entry name" value="HTHTETR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48498">
        <property type="entry name" value="SSF48498"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50977">
        <property type="entry name" value="HTH_TETR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH tetR-type" evidence="2">
        <location>
            <begin position="6"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="1">
        <location>
            <begin position="29"/>
            <end position="48"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ69240.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="187" mass="20379" checksum="F924815E993BFF55" modified="2015-12-09" version="1">MSRNAAETEGKILDLAESLIRKNGYNGVSFRDLASGVGVKSSSVHYYFPAKEDLGAKVARRYTDRFLEALGDPEDGPATASEIVKKLHDLFVYALGSDGQMCLCGILAAESAGLPENVVTEAKSFFDRVSEWLTVSLSRTDWAKNRSEEEIKVEALSVLALLEGGMIIARVQNDPALLTTLRPQLAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5B5</accession>
    <name>A0A0M7A5B5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 11">sn-glycerol-3-phosphate transport system permease protein UgpE</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">lacG</name>
        <name evidence="11" type="synonym">ugpE</name>
        <name evidence="13" type="ORF">LAX5112_02259</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Part of the ABC transporter complex UgpABCE involved in sn-glycerol-3-phosphate import. Probably responsible for the translocation of the substrate across the membrane.</text>
    </comment>
    <comment type="function">
        <text evidence="11">Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3 11">The complex is composed of two ATP-binding proteins (UgpC), two transmembrane proteins (UgpA and UgpE) and a solute-binding protein (UgpB).</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 11">Cell inner membrane</location>
            <topology evidence="1 11">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="10">Cell membrane</location>
            <topology evidence="10">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 10">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69807.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671882.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02259"/>
    <dbReference type="EnsemblBacteria" id="CTQ69807">
        <property type="protein sequence ID" value="CTQ69807"/>
        <property type="gene ID" value="LAX5112_02259"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055052">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008643">
        <property type="term" value="P:carbohydrate transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015794">
        <property type="term" value="P:glycerol-3-phosphate transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0001407">
        <property type="term" value="P:glycerophosphodiester transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030165">
        <property type="entry name" value="UgpE"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43744:SF8">
        <property type="entry name" value="PTHR43744:SF8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="11" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0762">Sugar transport</keyword>
    <keyword evidence="6 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 10" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="10" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="81"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="112"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="148"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="187"/>
            <end position="210"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="242"/>
            <end position="262"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="12">
        <location>
            <begin position="77"/>
            <end position="263"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011557"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00020515"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022597"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00025342"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU363056"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="CTQ69807.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="275" mass="30027" checksum="629B030746B3F8AA" modified="2015-12-09" version="1">MPSWQRFRAQFVDHVILITGALFMSLPVYALFAATTHAPGTRIAPRLDLGGHGLENYTAFFTTSAGFSGDVTAALMLWNSFVFGAGFAALKTVVSLLAAFALLYFRVRFATFIFWLLLLTLMLPLESRFLATYAIAADLGLVNTHAGLILPLAASGLGTLFFRQFLMTVPDTLQESARLDGAGPLRFLTDILAPLCLPTASALFLVLFVTGWNQYLWPVMITSDESFYTVVRGMQFFGQNSLSGIMLAVVAVLPPAILVILFQRQVVKGLFDGSH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5L9</accession>
    <name>A0A0M7A5L9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 8 9">Chorismate synthase</fullName>
            <shortName evidence="8">CS</shortName>
            <ecNumber evidence="4 8 9">4.2.3.5</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">5-enolpyruvylshikimate-3-phosphate phospholyase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8 10" type="primary">aroC</name>
        <name evidence="10" type="ORF">LAX5112_02487</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 8 9">
            <text>5-O-(1-carboxyvinyl)-3-phosphoshikimate = chorismate + phosphate</text>
            <dbReference type="Rhea" id="RHEA:21020"/>
            <dbReference type="ChEBI" id="CHEBI:29748"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57701"/>
            <dbReference type="EC" id="4.2.3.5"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="8 9">
            <name>FMNH2</name>
            <dbReference type="ChEBI" id="CHEBI:57618"/>
        </cofactor>
        <text evidence="8 9">Reduced FMN (FMNH(2)).</text>
    </comment>
    <comment type="pathway">
        <text evidence="2 8 9">Metabolic intermediate biosynthesis; chorismate biosynthesis; chorismate from D-erythrose 4-phosphate and phosphoenolpyruvate: step 7/7.</text>
    </comment>
    <comment type="subunit">
        <text evidence="8">Homotetramer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 8 9">Belongs to the chorismate synthase family.</text>
    </comment>
    <dbReference type="EC" id="4.2.3.5" evidence="4 8 9"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70378.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672143.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02487"/>
    <dbReference type="EnsemblBacteria" id="CTQ70378">
        <property type="protein sequence ID" value="CTQ70378"/>
        <property type="gene ID" value="LAX5112_02487"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00053">
        <property type="reaction ID" value="UER00090"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004107">
        <property type="term" value="F:chorismate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009073">
        <property type="term" value="P:aromatic amino acid family biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008652">
        <property type="term" value="P:cellular amino acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009423">
        <property type="term" value="P:chorismate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd07304">
        <property type="entry name" value="Chorismate_synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00300">
        <property type="entry name" value="Chorismate_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000453">
        <property type="entry name" value="Chorismate_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035904">
        <property type="entry name" value="Chorismate_synth_AroC_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020541">
        <property type="entry name" value="Chorismate_synthase_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21085">
        <property type="entry name" value="PTHR21085"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01264">
        <property type="entry name" value="Chorismate_synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001456">
        <property type="entry name" value="Chorismate_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103263">
        <property type="entry name" value="SSF103263"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00033">
        <property type="entry name" value="aroC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00787">
        <property type="entry name" value="CHORISMATE_SYNTHASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00788">
        <property type="entry name" value="CHORISMATE_SYNTHASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00789">
        <property type="entry name" value="CHORISMATE_SYNTHASE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 8 9" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="6 8 9" id="KW-0057">Aromatic amino acid biosynthesis</keyword>
    <keyword evidence="8" id="KW-0274">FAD</keyword>
    <keyword evidence="8" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="8" id="KW-0288">FMN</keyword>
    <keyword evidence="7 8 9" id="KW-0456">Lyase</keyword>
    <keyword evidence="8" id="KW-0521">NADP</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="binding site" evidence="8">
        <location>
            <position position="48"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="54"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="130"/>
            <end position="132"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="242"/>
            <end position="243"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="287"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="302"/>
            <end position="306"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="328"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001852"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005044"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00013036"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00300"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU000605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ70378.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="361" mass="38806" checksum="0B9BC774D44E7828" modified="2015-12-09" version="1">MSHNSFGHMFRVTTWGESHGPAIGCVVDGCPPLVPLTEADIQGFMEKRKPGQSKYTTQRREPDEVKILSGVMIDEDGVQKTTGTPISLMVENTDQRSKDYSEIKDRFRPGHADFTYDAKYGIRDYRGGGRSSARETAMRVAAGAVARKVLQGVTIRGALVQVGPHKLDRGNWDWTEVNNNPFFCPDAAAAAQWAEYLDGVRKAGSSVGAVIEIVAEGVPAGWGAPIYGKLDTDLTAAMMSINAVKGVEVGNGFESATLTGEENADEIRVDDVGRPVFLTNNAGGVLGGISNGDPLVVRFAVKPTSSILTERKSITRQGEEVDVMTKGRHDPCVGIRAVPVGEAMMACVLADHFIRNRGQVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5S5</accession>
    <name>A0A0M7A5S5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Electron transfer flavoprotein-ubiquinone oxidoreductase</fullName>
            <shortName evidence="9">ETF-QO</shortName>
            <ecNumber evidence="9">1.5.5.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">LAX5112_02430</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Accepts electrons from ETF and reduces ubiquinone.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>a ubiquinone + reduced [electron-transfer flavoprotein] = a ubiquinol + H(+) + oxidized [electron-transfer flavoprotein]</text>
            <dbReference type="Rhea" id="RHEA:24052"/>
            <dbReference type="Rhea" id="RHEA-COMP:9565"/>
            <dbReference type="Rhea" id="RHEA-COMP:9566"/>
            <dbReference type="Rhea" id="RHEA-COMP:10685"/>
            <dbReference type="Rhea" id="RHEA-COMP:10686"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16389"/>
            <dbReference type="ChEBI" id="CHEBI:17976"/>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
            <dbReference type="ChEBI" id="CHEBI:58307"/>
            <dbReference type="EC" id="1.5.5.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 9">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="9">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
        <text evidence="9">Binds 1 [4Fe-4S] cluster.</text>
    </comment>
    <dbReference type="EC" id="1.5.5.1" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70249.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672034.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02430"/>
    <dbReference type="EnsemblBacteria" id="CTQ70249">
        <property type="protein sequence ID" value="CTQ70249"/>
        <property type="gene ID" value="LAX5112_02430"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004174">
        <property type="term" value="F:electron-transferring-flavoprotein dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040156">
        <property type="entry name" value="ETF-QO"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10617">
        <property type="entry name" value="PTHR10617"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5 9" id="KW-0249">Electron transport</keyword>
    <keyword evidence="4 9" id="KW-0274">FAD</keyword>
    <keyword evidence="3 9" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="9" id="KW-0408">Iron</keyword>
    <keyword evidence="7 9" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6 9 10" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 9" id="KW-0813">Transport</keyword>
    <keyword evidence="8 9 10" id="KW-0830">Ubiquinone</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023075"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU366068"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ70249.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="558" mass="61055" checksum="6933B711D550390C" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A713</accession>
    <name>A0A0M7A713_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">BsSco</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ypmQ</name>
        <name evidence="5" type="ORF">LAX5112_02495</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the SCO1/2 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70401.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672078.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02495"/>
    <dbReference type="EnsemblBacteria" id="CTQ70401">
        <property type="protein sequence ID" value="CTQ70401"/>
        <property type="gene ID" value="LAX5112_02495"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd02968">
        <property type="entry name" value="SCO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003782">
        <property type="entry name" value="SCO1/SenC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013766">
        <property type="entry name" value="Thioredoxin_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12151">
        <property type="entry name" value="PTHR12151"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02630">
        <property type="entry name" value="SCO1-SenC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51352">
        <property type="entry name" value="THIOREDOXIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0186">Copper</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="6"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="domain" description="Thioredoxin" evidence="4">
        <location>
            <begin position="41"/>
            <end position="206"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010996"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ70401.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="208" mass="22355" checksum="299252BA5359360E" modified="2015-12-09" version="1">MSGLKLFRYVAWAAVAVLACVAGALVYLQTTSSNNSGALIEPLAAIGGPFELVGGSGETVTDQTLAGKPTVMFFGFTYCPDVCPTTLSELQGWIEALGPDADKLNYAFVSVDPERDTPDVMRDYVGAFDDRILALTGSRENIDSMLKAYRVYAKRVPLDDGDYTMDHSAAVYLMNADNKFVGTIAYGEVEETALAKLKRLIENAPASS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A738</accession>
    <name>A0A0M7A738_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">C4-dicarboxylate-binding periplasmic protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">dctP_5</name>
        <name evidence="3" type="ORF">LAX5112_02116</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the bacterial solute-binding protein 7 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69444.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451112.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02116"/>
    <dbReference type="EnsemblBacteria" id="CTQ69444">
        <property type="protein sequence ID" value="CTQ69444"/>
        <property type="gene ID" value="LAX5112_02116"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071702">
        <property type="term" value="P:organic substance transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.190.170">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018389">
        <property type="entry name" value="DctP_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006311">
        <property type="entry name" value="TAT_signal"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019546">
        <property type="entry name" value="TAT_signal_bac_arc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038404">
        <property type="entry name" value="TRAP_DctP_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33376">
        <property type="entry name" value="PTHR33376"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03480">
        <property type="entry name" value="DctP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01409">
        <property type="entry name" value="TAT_signal_seq"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ69444.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="380" mass="40974" checksum="9702FE11EFA3C3DE" modified="2015-12-09" version="1">MKKTEDLASHERRNFLKLTSKGAFTAAVVAGAAGTLWSDEAVAQTAQEERAREQAADHTMTLATAYVLGASRSYPIMQLDLKENIQNATNGKVYVKLAPGGQLGAGGALAQAVQGGTIQAAQHSLSNFAPFASAVDLINMPYFCGSNQRFTNLVTSDAWKKEVHPKIEASGFKALFYVVIDPRVVAVRKGGNKVITPADLDGVKFRVPGSAMLQQYYRMVGANPTPVAWGETPSAIKQGVADALDPSVGALYVFGFKDILSHVTFTQAVPDSQVYSMNLEWFNSLPADVQQGIEFAGEITAQQNLAKVPAARSYAMAELAKSGVEFHSLTDDQLAEWQAAGGYQREEWDQFKVELAGSMDAFGRLEEAANTQGRLYVHDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7M9</accession>
    <name>A0A0M7A7M9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Protein phosphatase CheZ</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Chemotaxis protein CheZ</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">LAX5112_02716</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the CheZ family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71098.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672270.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02716"/>
    <dbReference type="EnsemblBacteria" id="CTQ71098">
        <property type="protein sequence ID" value="CTQ71098"/>
        <property type="gene ID" value="LAX5112_02716"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009288">
        <property type="term" value="C:bacterial-type flagellum"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0097588">
        <property type="term" value="P:archaeal or bacterial-type flagellum-dependent cell motility"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006935">
        <property type="term" value="P:chemotaxis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050920">
        <property type="term" value="P:regulation of chemotaxis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007439">
        <property type="entry name" value="Chemotax_Pase_CheZ"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04344">
        <property type="entry name" value="CheZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0145">Chemotaxis</keyword>
    <keyword evidence="7" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-0283">Flagellar rotation</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="205"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="338"/>
            <end position="377"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="7">
        <location>
            <begin position="70"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="8">
        <location>
            <begin position="351"/>
            <end position="377"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005908"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00018484"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022500"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022779"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00029599"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ71098.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="390" mass="42300" checksum="827400BEDD00ECA7" modified="2015-12-09" version="1">MKAETQQVEPELIGEAEYQTLEQTLMESDRGRRFLKEFLNRNKTPETTEILGAIQRLEKVVTRQRKVPDLDKIRLDIADMHEAIERTKAEIANIKDDGDESNRFVDASHELDAIVTQTEGATQSILEAAEQIQEKAWVLRENGADDATCDDIDAKATEIFMACSFQDLTGQRTNKVVQVLRYLESRINLMINIWGIEDLEADDTAGPVDSRPDAHLLNGPQRDGAGVSQNSVDELMSVSGDVFDAAVEEVAAPGNPSASEASAPMGEADIDALMAGDSEPMDAAAIDDMFASAPAAEETEAEDTADVTDPVADEFEAAHADEVLDEAAIDKLFDAEVSEPEAANDSEPAAETAEAEADADWALVEQEADADDGADPLTELTEAERQALFN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7X4</accession>
    <name>A0A0M7A7X4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Thioredoxin reductase</fullName>
            <ecNumber evidence="2">1.8.1.9</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">trxB_2</name>
        <name evidence="2" type="ORF">LAX5112_02474</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.8.1.9" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70340.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672065.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02474"/>
    <dbReference type="EnsemblBacteria" id="CTQ70340">
        <property type="protein sequence ID" value="CTQ70340"/>
        <property type="gene ID" value="LAX5112_02474"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004791">
        <property type="term" value="F:thioredoxin-disulfide reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd00038">
        <property type="entry name" value="CAP_ED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018490">
        <property type="entry name" value="cNMP-bd-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000595">
        <property type="entry name" value="cNMP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023753">
        <property type="entry name" value="FAD/NAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00027">
        <property type="entry name" value="cNMP_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07992">
        <property type="entry name" value="Pyr_redox_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00100">
        <property type="entry name" value="cNMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51206">
        <property type="entry name" value="SSF51206"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50042">
        <property type="entry name" value="CNMP_BINDING_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cyclic nucleotide-binding" evidence="1">
        <location>
            <begin position="12"/>
            <end position="131"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70340.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="538" mass="57735" checksum="F4013A08445B1798" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8F0</accession>
    <name>A0A0M7A8F0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Ribosomal protein L7Ae family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02801</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71378.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008192180.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02801"/>
    <dbReference type="EnsemblBacteria" id="CTQ71378">
        <property type="protein sequence ID" value="CTQ71378"/>
        <property type="gene ID" value="LAX5112_02801"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007393">
        <property type="entry name" value="DUF448"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029064">
        <property type="entry name" value="L30e-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037465">
        <property type="entry name" value="YlxR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035931">
        <property type="entry name" value="YlxR-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34215">
        <property type="entry name" value="PTHR34215"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04296">
        <property type="entry name" value="YlxR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55315">
        <property type="entry name" value="SSF55315"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64376">
        <property type="entry name" value="SSF64376"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2" id="KW-0689">Ribosomal protein</keyword>
    <feature type="domain" description="YlxR" evidence="1">
        <location>
            <begin position="10"/>
            <end position="86"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04296"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71378.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="211" mass="22927" checksum="044168A0C54A2810" modified="2015-12-09" version="1">MPRKNEPTERQCAVTRKVQPVSSLIRFVLDPEGQVVPDLKRVLPGRGVWVTASSDVVSVAEKDRKKVFGRGFKTEVSVEPGLAERVDTLMEKSALQALSMTRKAGELITGYSKVDAALRRDPVAGLIHASDAAEDGVRKLAALAAGRNEDANGCQIVRLFESDQLDLALGRSNVIHAALLAGQASENFLSRVRDLERFRGYSVADDEKSNA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8W6</accession>
    <name>A0A0M7A8W6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Peptidase PmbA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">LAX5112_02344</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase U62 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70074.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671966.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02344"/>
    <dbReference type="EnsemblBacteria" id="CTQ70074">
        <property type="protein sequence ID" value="CTQ70074"/>
        <property type="gene ID" value="LAX5112_02344"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008237">
        <property type="term" value="F:metallopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.2290.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045569">
        <property type="entry name" value="Metalloprtase-TldD/E_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045570">
        <property type="entry name" value="Metalloprtase-TldD/E_cen_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002510">
        <property type="entry name" value="Metalloprtase-TldD/E_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035068">
        <property type="entry name" value="TldD/PmbA_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036059">
        <property type="entry name" value="TldD/PmbA_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01523">
        <property type="entry name" value="PmbA_TldD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19289">
        <property type="entry name" value="PmbA_TldD_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19290">
        <property type="entry name" value="PmbA_TldD_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF111283">
        <property type="entry name" value="SSF111283"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PmbA_TldD" evidence="2">
        <location>
            <begin position="29"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="domain" description="PmbA_TldD_M" evidence="4">
        <location>
            <begin position="121"/>
            <end position="224"/>
        </location>
    </feature>
    <feature type="domain" description="PmbA_TldD_C" evidence="3">
        <location>
            <begin position="233"/>
            <end position="446"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005836"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01523"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF19289"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF19290"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ70074.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="447" mass="47087" checksum="21021881A1297AE6" modified="2015-12-09" version="1">MSELIDQTELQSRAERLVAAARNAGADACDAIAVTGVSLGVEVRDGKVEETERAEGDDVTLRVFVGKRSAAVSANQLDNPSDLAERAVAMAKVAPEDPFAGLADPDLLVKQLPELELLDSKQLSADELTNIALEAEAAGLSVEGISKSGGASASWRLAGVVMATSHGFQGAYLSSRFGMSMTAVAGDGTAMERDYDFDSRTFFEDLDAPVDIGRRAGERAVRRLNPDKLSTRTTNVIYEARAARSILGHLVGAINGASVARKTSFLMDQLGEAVLAPGLTVVDDPFKRRGAATRPFDGEGTEANVLNMVEDGVLQHWYLDGASARELGLTPNGRARRAGSGTSPGSTNVTLMRGEKSLEELMADAGDGLLVTDLIGHGVNGLTGDYSRGAAGFWFENGKIVRPVSEITIAGNLKDMFKRMVPGSDLDNRYAAAAPSILIEGMALAGN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9A5</accession>
    <name>A0A0M7A9A5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Transcriptional regulatory protein BaeR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">baeR_1</name>
        <name evidence="5" type="ORF">LAX5112_02908</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71688.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008194128.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02908"/>
    <dbReference type="EnsemblBacteria" id="CTQ71688">
        <property type="protein sequence ID" value="CTQ71688"/>
        <property type="gene ID" value="LAX5112_02908"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00383">
        <property type="entry name" value="trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001867">
        <property type="entry name" value="OmpR/PhoB-type_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039420">
        <property type="entry name" value="WalR-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48111">
        <property type="entry name" value="PTHR48111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00486">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00862">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51755">
        <property type="entry name" value="OMPR_PHOB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="1" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="3">
        <location>
            <begin position="3"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="domain" description="OmpR/PhoB-type" evidence="4">
        <location>
            <begin position="132"/>
            <end position="231"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="OmpR/PhoB-type" evidence="2">
        <location>
            <begin position="132"/>
            <end position="231"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="1">
        <location>
            <position position="52"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ71688.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="232" mass="26531" checksum="DCA885DE12BCFF76" modified="2015-12-09" version="1">MPTIALVDDDRNILTSVSIALEAEGYRVQSYTDGTSALDGLQSDPPELAIFDIKMPRMDGMELLRRLRQTSDLPVIFLTSKDDEIDELFGLKMGADDFIRKPFSQRLLVERVRAVLRRAQPRDASAPRDDADKLLERGQLVMDQERHTCTWNNMPVTLTVTEFLILSALAQRPGVVKSRNALMDAAYDDQVYVDDRTIDSHIKRLRKKFKVVDDDFDMIETLYGVGYRFREA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9G7</accession>
    <name>A0A0M7A9G7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">D-malate degradation protein R</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">dmlR_7</name>
        <name evidence="3" type="ORF">LAX5112_02928</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71785.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672447.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02928"/>
    <dbReference type="EnsemblBacteria" id="CTQ71785">
        <property type="protein sequence ID" value="CTQ71785"/>
        <property type="gene ID" value="LAX5112_02928"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ71785.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="305" mass="33940" checksum="1B446DA8536BADBA" modified="2015-12-09" version="1">MAYLENIRTFLRVYELGNMSAAARDLRISSAVASSRISQLEEHLNVRLFQRTTRALSPTEQGNIFYRGATKIMEAVEEAEAEITNMTRSPRGTLFVAAPISMGQSLIAPAIPTFKADHPLIDIRLRLSDRKVDLTGEGLDAAFFLGVPEDSNLKIRKIADCQRILCASPDYIAKTGQPASSAELSTGKFDCLNMRYPGAPEFQWPLETPEGVKRIPVKGPFESDHGDVLTAWALEGHGIVLKPVFEVAEHLKSGRLVQILESEPPIPVQMACLYTHRRRQDPKVRLFIDFMVSHIQDELAKTPSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9N3</accession>
    <name>A0A0M7A9N3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Carboxylate/amino acid/amine transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02510</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70443.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02510"/>
    <dbReference type="EnsemblBacteria" id="CTQ70443">
        <property type="protein sequence ID" value="CTQ70443"/>
        <property type="gene ID" value="LAX5112_02510"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000620">
        <property type="entry name" value="EamA_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00892">
        <property type="entry name" value="EamA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="38"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="68"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="94"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="122"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="146"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="179"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="217"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="247"/>
            <end position="266"/>
        </location>
    </feature>
    <feature type="domain" description="EamA" evidence="2">
        <location>
            <begin position="6"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="domain" description="EamA" evidence="2">
        <location>
            <begin position="155"/>
            <end position="287"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ70443.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="294" mass="31210" checksum="C8CE3A7AD3B80C7D" modified="2015-12-09" version="1">MAYGNAVLLLVATTLLWGGNTVAGRLAAGEVSPMVVVFLRWIIVAGLLVPVLWPRIRSEWPVMRGSFLRMVLMAAFGFVGFNTLFYIAATETTAVNLGIIQGSMPILVLIGSVVAFGSKVRLLQVVGILATLLGVTLIAAQGSLDVLLSLAVNPGDGVMLIACVLYSGYALALRNRPQVSGLVFFAVLSVISVFASLPGLAYEMATDTALWPDMKGWLIVLYIALGPSCLSQIFFMRGVELIGPARAGVFINLVPIFAAVLAVSILGEPFKWHHGLALLLVLGGIWLSERKAGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AA99</accession>
    <name>A0A0M7AA99_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">3-oxoacyl-[acyl-carrier-protein] reductase FabG</fullName>
            <ecNumber evidence="2">1.1.1.100</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">fabG_8</name>
        <name evidence="2" type="ORF">LAX5112_02806</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the short-chain dehydrogenases/reductases (SDR) family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.100" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71392.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672347.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02806"/>
    <dbReference type="EnsemblBacteria" id="CTQ71392">
        <property type="protein sequence ID" value="CTQ71392"/>
        <property type="gene ID" value="LAX5112_02806"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004316">
        <property type="term" value="F:3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00106">
        <property type="entry name" value="adh_short"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU000363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71392.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="245" mass="25789" checksum="5AA3AFCB8CB3FBA3" modified="2015-12-09" version="1">MTTRKIALVTGATRGIGKEAATQLAQKGFTVLVAGRSLEQAAKVAENLKNAGHSAQAVKLDITQSSDIADVVAEIGKTFGKLDILVNNAGVQLEGDWGQNNAASVSQQQLRETFAINLFAQVELTQSFLPLLRKSDDAQILNVSSIVGSLQTHADTSSPWGAVKPFAYNASKAALNLYTISLAQALAGDGIRVASVHPGWVKTDLGTDAAPLTIAEGAQTITELATNQYGQDSGGFYHLGENQPW</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAL4</accession>
    <name>A0A0M7AAL4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="14">Methyl-accepting chemotaxis protein 4</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="14" type="primary">mcp4_12</name>
        <name evidence="14" type="ORF">LAX5112_02848</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the methyl-accepting chemotaxis (MCP) protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71512.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672372.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ71512">
        <property type="protein sequence ID" value="CTQ71512"/>
        <property type="gene ID" value="LAX5112_02848"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004888">
        <property type="term" value="F:transmembrane signaling receptor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006935">
        <property type="term" value="P:chemotaxis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004090">
        <property type="entry name" value="Chemotax_Me-accpt_rcpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004089">
        <property type="entry name" value="MCPsignal_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033480">
        <property type="entry name" value="sCache_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000727">
        <property type="entry name" value="T_SNARE_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00015">
        <property type="entry name" value="MCPsignal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17200">
        <property type="entry name" value="sCache_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00260">
        <property type="entry name" value="CHEMTRNSDUCR"/>
    </dbReference>
    <dbReference type="SMART" id="SM01049">
        <property type="entry name" value="Cache_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00283">
        <property type="entry name" value="MA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50111">
        <property type="entry name" value="CHEMOTAXIS_TRANSDUC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50192">
        <property type="entry name" value="T_SNARE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="9" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 8" id="KW-0807">Transducer</keyword>
    <keyword evidence="3 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 10" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="189"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="13">
        <location>
            <begin position="210"/>
            <end position="263"/>
        </location>
    </feature>
    <feature type="domain" description="Methyl-accepting transducer" evidence="11">
        <location>
            <begin position="303"/>
            <end position="525"/>
        </location>
    </feature>
    <feature type="domain" description="T-SNARE coiled-coil homology" evidence="12">
        <location>
            <begin position="455"/>
            <end position="517"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="9">
        <location>
            <begin position="247"/>
            <end position="277"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023224"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00029447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="CTQ71512.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="565" mass="60001" checksum="9CD1CF38E73D6A85" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAP8</accession>
    <name>A0A0M7AAP8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">NADP-specific glutamate dehydrogenase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">ldh</name>
        <name evidence="10" type="ORF">LAX5112_03091</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Catalyzes the reversible oxidative deamination of glutamate to alpha-ketoglutarate and ammonia.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>H2O + L-glutamate + NADP(+) = 2-oxoglutarate + H(+) + NADPH + NH4(+)</text>
            <dbReference type="Rhea" id="RHEA:11612"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16810"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="EC" id="1.4.1.4"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="3 8">Belongs to the Glu/Leu/Phe/Val dehydrogenases family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72188.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672576.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03091"/>
    <dbReference type="EnsemblBacteria" id="CTQ72188">
        <property type="protein sequence ID" value="CTQ72188"/>
        <property type="gene ID" value="LAX5112_03091"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004354">
        <property type="term" value="F:glutamate dehydrogenase (NADP+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006520">
        <property type="term" value="P:cellular amino acid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046346">
        <property type="entry name" value="Aminiacid_DH-like_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006095">
        <property type="entry name" value="Glu/Leu/Phe/Val_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033524">
        <property type="entry name" value="Glu/Leu/Phe/Val_DH_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006096">
        <property type="entry name" value="Glu/Leu/Phe/Val_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006097">
        <property type="entry name" value="Glu/Leu/Phe/Val_DH_dimer_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016211">
        <property type="entry name" value="Glu/Phe/Leu/Val_DH_bac/arc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42722">
        <property type="entry name" value="PTHR42722"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00208">
        <property type="entry name" value="ELFV_dehydrog"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02812">
        <property type="entry name" value="ELFV_dehydrog_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000188">
        <property type="entry name" value="Phe_leu_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00082">
        <property type="entry name" value="GLFDHDRGNASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM00839">
        <property type="entry name" value="ELFV_dehydrog"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53223">
        <property type="entry name" value="SSF53223"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00074">
        <property type="entry name" value="GLFV_DEHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0520">NAD</keyword>
    <keyword evidence="7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5 8 10" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ELFV_dehydrog" evidence="9">
        <location>
            <begin position="152"/>
            <end position="357"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor/acceptor" evidence="6">
        <location>
            <position position="90"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="188"/>
            <end position="193"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001463"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00003868"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00021155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR000188-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR000188-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU004417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="SMART" id="SM00839"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ72188.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="357" mass="37721" checksum="EBFE54CCD926F574" modified="2015-12-09" version="1">MNAIHKAVHHTAVFDHPEMEDHENIVIVQDANTGLKAIIAVHDTRLGPALGGCRIWPYATPSEALNDALRLSRGMTYKNSLAGLELGGGKAVIIADPRKDKSEALMEAFGRHVERLSGTYITAEDVGVSPEDMEAVARHTDHVRGTQATGLGDPSPYTALGVFEGIKASVVHAFGDPSLSGRTVSVQGLGHVGFDVARQLHEAGANLVVSDIHKPAVEKAVEAFGAKTVEPADAHKVEADVFVPCALGAGLNARTIPEIKARIVAGAANNQLQTPADGVALKNRGILYAPDYAINAGGVISIALAKPGGNDEEVRKKTIAIGDTLTRIYDRAVRENAAPEQIADRMAEERLSAVRSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABH5</accession>
    <name>A0A0M7ABH5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Cell division coordinator CpoB</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">cpoB</name>
        <name evidence="4" type="ORF">LAX5112_03198</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the CpoB family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72485.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672634.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03198"/>
    <dbReference type="EnsemblBacteria" id="CTQ72485">
        <property type="protein sequence ID" value="CTQ72485"/>
        <property type="gene ID" value="LAX5112_03198"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030288">
        <property type="term" value="C:outer membrane-bounded periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043093">
        <property type="term" value="P:FtsZ-dependent cytokinesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02066">
        <property type="entry name" value="CpoB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034706">
        <property type="entry name" value="CpoB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014162">
        <property type="entry name" value="CpoB_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_repeat"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13174">
        <property type="entry name" value="TPR_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="SSF48452"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02795">
        <property type="entry name" value="tol_pal_ybgF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50005">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="1" id="KW-0132">Cell division</keyword>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="1" id="KW-0574">Periplasm</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <keyword evidence="2" id="KW-0802">TPR repeat</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5009984374" description="Cell division coordinator CpoB" evidence="1">
        <location>
            <begin position="26"/>
            <end position="311"/>
        </location>
    </feature>
    <feature type="repeat" description="TPR" evidence="2">
        <location>
            <begin position="223"/>
            <end position="256"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="81"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="46"/>
            <end position="73"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02066"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00339"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ72485.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="311" mass="33165" checksum="D99F63775F2441AE" modified="2015-12-09" version="1" precursor="true">MKQFYRLVCPVLAVMLISVATPSHAQLFGKRNDDSSVRIGQLEEQIRVLTGQIEQMAFQMRELQDQMRRMQEDNEYRFQQLEGGTPGKRSDASPGLAPDGTPQSEGLVAPGGGLATLPADGSGDGDWSQSGGYEAGSGVPSNGPIDLSSLAQGQVVPPGAAADTTPSPEFSTDDDQIAGIIGSGDPRTDYDRAYSMAVNGDYAAAEAGFRTFLESYPDNQLAANAQYWLGESLLAQQNYREAADAFLKTYRDHPGNSKSPDSLLKLGVSLRGLGETDVACATFSELLSKFPNAAPAVLSQARDERQSAQCS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AC60</accession>
    <name>A0A0M7AC60_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Long-chain-fatty-acid--CoA ligase</fullName>
            <ecNumber evidence="4">6.2.1.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">fadD_2</name>
        <name evidence="4" type="ORF">LAX5112_02930</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="6.2.1.3" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71790.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672449.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02930"/>
    <dbReference type="EnsemblBacteria" id="CTQ71790">
        <property type="protein sequence ID" value="CTQ71790"/>
        <property type="gene ID" value="LAX5112_02930"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004467">
        <property type="term" value="F:long-chain fatty acid-CoA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12780">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025110">
        <property type="entry name" value="AMP-bd_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045851">
        <property type="entry name" value="AMP-bd_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020845">
        <property type="entry name" value="AMP-binding_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000873">
        <property type="entry name" value="AMP-dep_Synth/Lig"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042099">
        <property type="entry name" value="ANL_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00501">
        <property type="entry name" value="AMP-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13193">
        <property type="entry name" value="AMP-binding_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00455">
        <property type="entry name" value="AMP_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0007">Acetylation</keyword>
    <keyword evidence="4" id="KW-0436">Ligase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AMP-binding" evidence="2">
        <location>
            <begin position="35"/>
            <end position="473"/>
        </location>
    </feature>
    <feature type="domain" description="AMP-binding_C" evidence="3">
        <location>
            <begin position="482"/>
            <end position="556"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022990"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF13193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ71790.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="571" mass="63074" checksum="87CB1ECF9942E8F2" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACB3</accession>
    <name>A0A0M7ACB3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">L-threonine aldolase</fullName>
            <ecNumber evidence="3">4.1.2.48</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ltaE</name>
        <name evidence="5" type="ORF">LAX5112_03123</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Catalyzes the cleavage of L-allo-threonine and L-threonine to glycine and acetaldehyde.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>L-allo-threonine = acetaldehyde + glycine</text>
            <dbReference type="Rhea" id="RHEA:26209"/>
            <dbReference type="ChEBI" id="CHEBI:15343"/>
            <dbReference type="ChEBI" id="CHEBI:57305"/>
            <dbReference type="ChEBI" id="CHEBI:58585"/>
            <dbReference type="EC" id="4.1.2.48"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>L-threonine = acetaldehyde + glycine</text>
            <dbReference type="Rhea" id="RHEA:19625"/>
            <dbReference type="ChEBI" id="CHEBI:15343"/>
            <dbReference type="ChEBI" id="CHEBI:57305"/>
            <dbReference type="ChEBI" id="CHEBI:57926"/>
            <dbReference type="EC" id="4.1.2.48"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 3">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the threonine aldolase family.</text>
    </comment>
    <dbReference type="EC" id="4.1.2.48" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72277.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672597.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03123"/>
    <dbReference type="EnsemblBacteria" id="CTQ72277">
        <property type="protein sequence ID" value="CTQ72277"/>
        <property type="gene ID" value="LAX5112_03123"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008732">
        <property type="term" value="F:L-allo-threonine aldolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006567">
        <property type="term" value="P:threonine catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001597">
        <property type="entry name" value="ArAA_b-elim_lyase/Thr_aldolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026273">
        <property type="entry name" value="Low_specificity_L-TA_bact"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01212">
        <property type="entry name" value="Beta_elim_lyase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF038940">
        <property type="entry name" value="Low_specificity_LTA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0456">Lyase</keyword>
    <keyword evidence="2 3" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Beta_elim_lyase" evidence="4">
        <location>
            <begin position="2"/>
            <end position="289"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRNR" id="PIRNR038940"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF01212"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ72277.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="352" mass="37626" checksum="3F2E1620E277EC27" modified="2015-12-09" version="1">MDFASDNWAGAAPAVMSALTRHNNGHAPAYGSDPLTESVSNKFNELFEREVAVFFVATGTAANSLALAAYGKPGGAIFCHRDSHIQVDECNCPEFMTSGGKLVSVPGPSGKFDANGLIEAMSAFPDDVVHHGQVASVSISQATESGTVYTLEEIAAIKEVAASRSIPLHMDGARFANALVTLGCSPADMTWKSGVDVLSFGATKNGCWCAEAVVFFDLEAAKGFEYFRKRGGHLFSKSRFVAAQFDGYFNEDSWLDTAAHANAMALKLAEGIRTAGGRTAWPVEANELFPILKRRQFEQLEAKGAMIYEWPAKDLPEGHAPQADEVCVRMVCSFATTEDDVAAFLNALSGTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACY1</accession>
    <name>A0A0M7ACY1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">ATP-dependent zinc metalloprotease FtsH</fullName>
            <ecNumber evidence="7">3.4.24.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">ftsH_1</name>
        <name evidence="7" type="synonym">ftsH</name>
        <name evidence="11" type="ORF">LAX5112_03200</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="7">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="7">Binds 1 zinc ion per subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Homohexamer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cell membrane</location>
            <topology evidence="7">Multi-pass membrane protein</topology>
            <orientation evidence="7">Cytoplasmic side</orientation>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the AAA ATPase family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 7">In the C-terminal section; belongs to the peptidase M41 family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="7">In the central section; belongs to the AAA ATPase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="3.4.24.-" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72491.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672636.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03200"/>
    <dbReference type="EnsemblBacteria" id="CTQ72491">
        <property type="protein sequence ID" value="CTQ72491"/>
        <property type="gene ID" value="LAX5112_03200"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004176">
        <property type="term" value="F:ATP-dependent peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004222">
        <property type="term" value="F:metalloendopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030163">
        <property type="term" value="P:protein catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.760">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01458">
        <property type="entry name" value="FtsH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041569">
        <property type="entry name" value="AAA_lid_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003959">
        <property type="entry name" value="ATPase_AAA_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003960">
        <property type="entry name" value="ATPase_AAA_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005936">
        <property type="entry name" value="FtsH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011546">
        <property type="entry name" value="Pept_M41_FtsH_extracell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000642">
        <property type="entry name" value="Peptidase_M41"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037219">
        <property type="entry name" value="Peptidase_M41-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00004">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17862">
        <property type="entry name" value="AAA_lid_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06480">
        <property type="entry name" value="FtsH_ext"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01434">
        <property type="entry name" value="Peptidase_M41"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF140990">
        <property type="entry name" value="SSF140990"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01241">
        <property type="entry name" value="FtsH_fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00674">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 7 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 7 11" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6 7 11" id="KW-0482">Metalloprotease</keyword>
    <keyword evidence="3 7 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="2 7 11" id="KW-0645">Protease</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="7" id="KW-0862">Zinc</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="102"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="domain" description="AAA" evidence="10">
        <location>
            <begin position="186"/>
            <end position="325"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="591"/>
            <end position="638"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="9">
        <location>
            <begin position="591"/>
            <end position="609"/>
        </location>
    </feature>
    <feature type="active site" evidence="7">
        <location>
            <position position="417"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="194"/>
            <end position="201"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="416"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <note>catalytic</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="420"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <note>catalytic</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="494"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <note>catalytic</note>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010044"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01458"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU003651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ72491.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="638" mass="69407" checksum="FD815760DFB9267E" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACZ9</accession>
    <name>A0A0M7ACZ9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Pyrimidine utilization regulatory protein R</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03046</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72090.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03046"/>
    <dbReference type="EnsemblBacteria" id="CTQ72090">
        <property type="protein sequence ID" value="CTQ72090"/>
        <property type="gene ID" value="LAX5112_03046"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00440">
        <property type="entry name" value="TetR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00455">
        <property type="entry name" value="HTHTETR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50977">
        <property type="entry name" value="HTH_TETR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH tetR-type" evidence="2">
        <location>
            <begin position="21"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="1">
        <location>
            <begin position="44"/>
            <end position="63"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ72090.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="198" mass="23108" checksum="E1B094059AF0645C" modified="2015-12-09" version="1">MFQREFCATHVDMKQNKPIGRVSKQDWLEAALELFKHAGIDAVRVERLANSLGVSKSGFYYHFRDLADLQRALLRHWIELDHKPQKRVSDVPDLSAEEKLAIMADVVDQADLSACDKAIRDWAHRDPKVRRLWRAEMKERVDSVRALFAELGFAGDELEMRTLLFVGYHVSEREMFPDVKNTARANMRRLRLKFLLSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AD84</accession>
    <name>A0A0M7AD84_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Anti-sigma factor, putative, ChrR family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03327</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72839.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672745.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72839">
        <property type="protein sequence ID" value="CTQ72839"/>
        <property type="gene ID" value="LAX5112_03327"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025979">
        <property type="entry name" value="ChrR-like_cupin_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12973">
        <property type="entry name" value="Cupin_7"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cupin_7" evidence="1">
        <location>
            <begin position="19"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="domain" description="Cupin_7" evidence="1">
        <location>
            <begin position="140"/>
            <end position="213"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12973"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72839.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="219" mass="24071" checksum="5825AF0135CC9AEC" modified="2015-12-09" version="1">MKIHADLSKRAQVDSATLDWIASPMAGVERRLLERDGEEVARATSLVRYAPGSSFSAHSHDLGEEFLVLDGVFTDETGDFPKGMYVRNPPGSRHIPSSEPGAVILVKLRQMQTDDDTFVRVDTLDPAGWQAGRTGEHILPLFVRPEEEVVMLHWESGAAFGEQSFPGGAEYFVVEGAFDDENGRYDQGTWLRLPAGSSQTIKTDNGARVWRKTGHLSAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADG9</accession>
    <name>A0A0M7ADG9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">HTH-type transcriptional regulator YofA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yofA_4</name>
        <name evidence="3" type="ORF">LAX5112_03267</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72677.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03267"/>
    <dbReference type="EnsemblBacteria" id="CTQ72677">
        <property type="protein sequence ID" value="CTQ72677"/>
        <property type="gene ID" value="LAX5112_03267"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ72677.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="298" mass="32298" checksum="5C403632CF384941" modified="2015-12-09" version="1">MDTRFLESLLAVVETGSIAAAARQQGLTAAAISQRIKVLETELNCTLLVRSAKTVRPSPECQRLLPAASVLVRDAGRLSLGISEDRLSGPYRIGAISTALLDIVPKVVREFRKTAPDVQLTVQPGSSQSLYEDLLAENVDAVICVAPPFQLPKGIRCFPVAEEPFLHIRPATHLRQDENGVLPWIIYDRSSWGGGLARHYLDKAISHVPVLCELDSPETIAAMVQEGLGQAAVPRWSGLEIHHSDLCASAVPILSIPQRSIVLLQRTMSHVAKIDLLLQNTALGAPRASNPDRANVQL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADN6</accession>
    <name>A0A0M7ADN6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Succinyl-diaminopimelate desuccinylase</fullName>
            <ecNumber evidence="3">3.5.1.18</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">dapE_2</name>
        <name evidence="3" type="ORF">LAX5112_03399</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.5.1.18" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72999.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672802.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03399"/>
    <dbReference type="EnsemblBacteria" id="CTQ72999">
        <property type="protein sequence ID" value="CTQ72999"/>
        <property type="gene ID" value="LAX5112_03399"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009014">
        <property type="term" value="F:succinyl-diaminopimelate desuccinylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002933">
        <property type="entry name" value="Peptidase_M20"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011650">
        <property type="entry name" value="Peptidase_M20_dimer"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07687">
        <property type="entry name" value="M20_dimer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01546">
        <property type="entry name" value="Peptidase_M20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="M20_dimer" evidence="2">
        <location>
            <begin position="202"/>
            <end position="360"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07687"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ72999.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="462" mass="50468" checksum="9125AC9B996D75E6" modified="2015-12-09" version="1">MSSIDKVLARIDADLDNSLGRLFELLKIKSISTDPEFKAPCQEAAEWLAKELNGIGIEASVRDTEGHPMVVGHRKSGKPGPHVLFYGHYDVQPVDPLNLWNRDPFDPAIETKEDGTKIIVARGAADDKGQLMTFVEAARAFIAETGDLPVDVSILFEGEEESGSPSLHPFLEANKDELSCDMALVCDTGQWDAETPAISVMLRGMVGDEIIVKAASRDLHSGSYGGSAQNPNHIVANIIAGLHDENGKITLPGFYDGVIDMPAEVTAMWDKLGFDVEAFLGEVGLKHPRGENDRTPLEHLWTRPTCEVNGMWGGYQGAGTKTVIPAEAHAKFTFRLVGDQDPDKIQEAFRAYVRSKIPADCSVEFLSKDGSPALRLDFAMPVLEKGKKALKDEWGKDAALTGMGGSIPIVGDFKRMLGMDSLLIGFGLEDDQIHSPNEKYNLKSFHKGIRSWARVLDELAKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADY1</accession>
    <name>A0A0M7ADY1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03249</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72626.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672669.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72626">
        <property type="protein sequence ID" value="CTQ72626"/>
        <property type="gene ID" value="LAX5112_03249"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809260" evidence="1">
        <location>
            <begin position="23"/>
            <end position="98"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72626.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="98" mass="10558" checksum="9F2BAA1F9628D0BB" modified="2015-12-09" version="1">MKILTKTFVAAAAIVVTGPAFAGDTTRILHDEPYGAIVTKEAGVLVFRGLPPTRKVIINPGGKTPLELRQTEINETNVVVMSQDDYVRGLGAKIVRLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADY6</accession>
    <name>A0A0M7ADY6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative binding protein component of ABC iron transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03258</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72652.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672677.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03258"/>
    <dbReference type="EnsemblBacteria" id="CTQ72652">
        <property type="protein sequence ID" value="CTQ72652"/>
        <property type="gene ID" value="LAX5112_03258"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026045">
        <property type="entry name" value="Ferric-bd"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002825">
        <property type="entry name" value="CfbpA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809427" evidence="2">
        <location>
            <begin position="21"/>
            <end position="326"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ72652.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="326" mass="34704" checksum="3C8115CA6337723F" modified="2015-12-09" version="1">MKKFLMAAGILAGATASAFAGDVSGKLVLYTSQPNQDAQATVDAFTEKHPGVEVEWVRDGTTKMMAKLRTEFEAGAPKPDVLLIADMVTMEGLKQEGRLMAHEGADVSAYDPALMDDDKTYFSTKLITSGIVYNTNAPMKPSSYKDLLKPEAKDKLAMPSPLTSGAATIHMAALTSNPDLGWAYYEGLADQGANPKGGNGGTYKAIAGGEKLYGFVVDFLPIREKLKGAPVEFVFPEEGVSAVTEPVAILSTAQNPDAAKAFVDFLLSEEGQKLASSQGYLPAHPAVAAPEGFPARDQIKLMDFDPAKALEQDQANKIKFTEIFGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AE10</accession>
    <name>A0A0M7AE10_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Lysine-arginine-ornithine-binding periplasmic protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_03338</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72861.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672754.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03338"/>
    <dbReference type="EnsemblBacteria" id="CTQ72861">
        <property type="protein sequence ID" value="CTQ72861"/>
        <property type="gene ID" value="LAX5112_03338"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809431" evidence="2">
        <location>
            <begin position="23"/>
            <end position="257"/>
        </location>
    </feature>
    <feature type="domain" description="PBPb" evidence="3">
        <location>
            <begin position="42"/>
            <end position="244"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00497"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ72861.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="257" mass="28007" checksum="0061ABB35FBDCC33" modified="2015-12-09" version="1">MKKTALFSVLLTMVLQPATSWADEITVMAGNLPPMFLDGGGGREAELITAALEKCGHTVKFNIQPFTRHWESFKNGQGDAVATVPMGMPIDGTATGVYIHYQNGVSFLTDSGASYDGLPDLSGKKVIGFKGAESIIPGLADHTGSFADYREVTDQITQSRSLFGGRVDAIIGDGMLFAEYNQQLRGQSDLRFDPNQSVSFKAVFDSSPYTMAFRDAKIAADFDRCFKELETDGTVKAINTKWVDKYRDSLGSSYLGY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEH2</accession>
    <name>A0A0M7AEH2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Transcriptional regulatory protein LiaR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">liaR</name>
        <name evidence="3" type="ORF">LAX5112_03310</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72806.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672732.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03310"/>
    <dbReference type="EnsemblBacteria" id="CTQ72806">
        <property type="protein sequence ID" value="CTQ72806"/>
        <property type="gene ID" value="LAX5112_03310"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06170">
        <property type="entry name" value="LuxR_C_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016032">
        <property type="entry name" value="Sig_transdc_resp-reg_C-effctor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000792">
        <property type="entry name" value="Tscrpt_reg_LuxR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00196">
        <property type="entry name" value="GerE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00038">
        <property type="entry name" value="HTHLUXR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00421">
        <property type="entry name" value="HTH_LUXR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46894">
        <property type="entry name" value="SSF46894"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50043">
        <property type="entry name" value="HTH_LUXR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH luxR-type" evidence="2">
        <location>
            <begin position="27"/>
            <end position="92"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ72806.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="107" mass="11764" checksum="BC59982E3D01E955" modified="2015-12-09" version="1">MTAHFALHSTRDLLRRARPLPSILEPTENILDGVTPRQLEIMMKLCEGKVNKQIAYELGVTTATVKAHIRFAIKRLGAKNRVHAVAMVAANAALHRPQQAAEMGLCA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEJ1</accession>
    <name>A0A0M7AEJ1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Adenylate cyclase 1</fullName>
            <ecNumber evidence="3">4.6.1.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">cyaA_13</name>
        <name evidence="3" type="ORF">LAX5112_03416</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="4.6.1.1" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ73047.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672814.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03416"/>
    <dbReference type="EnsemblBacteria" id="CTQ73047">
        <property type="protein sequence ID" value="CTQ73047"/>
        <property type="gene ID" value="LAX5112_03416"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004016">
        <property type="term" value="F:adenylate cyclase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009190">
        <property type="term" value="P:cyclic nucleotide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035556">
        <property type="term" value="P:intracellular signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07302">
        <property type="entry name" value="CHD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1230">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001054">
        <property type="entry name" value="A/G_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00211">
        <property type="entry name" value="Guanylate_cyc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00044">
        <property type="entry name" value="CYCc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50125">
        <property type="entry name" value="GUANYLATE_CYCLASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0456">Lyase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="37"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="74"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="99"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="128"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="domain" description="Guanylate cyclase" evidence="2">
        <location>
            <begin position="260"/>
            <end position="382"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ73047.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="430" mass="46685" checksum="DE5F35556B91F547" modified="2015-12-09" version="1">MSRLETAERAGLKLAVLCRTAVIGVCAVYWVAATTLIGASVSLTAMGILASLTIYGVIAYFLIGTRLDRWWLKYTIYTIDILAVCAAFALLPLRQGQDIPQIIAFRAYGIHFLFPLIAMACLSLSWRLVLWSGFVALAGWFTAYWWVLQDMPRIIEWRDFPDDPTTADYETLFLSTEFAGTGNRTGEAGMLFLASAVLALAVYRARRVFFAQLRAEQAREEAQATRERATSVLGKYVPEAVAMRLVNDTQAMVPQEVHGVVLIADIAGFSDFASGKPPTEVIGRLNDFLDLAATSVATHNGVVILFTGDGLLASFNTPIPIETPERAALACARDLVAHAHSEGFQLRVGLASGPLAAGSVGSSERQAFTVYGETVNRAARLEALGKELKAAIIADTGVAQTSDEIELTLAGEHQLKGIPGSWPIWTWRPD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFE7</accession>
    <name>A0A0M7AFE7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Putative ABC transporter ATP-binding protein YbhF</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">ybhF</name>
        <name evidence="6" type="ORF">LAX5112_03372</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72930.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672781.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03372"/>
    <dbReference type="EnsemblBacteria" id="CTQ72930">
        <property type="protein sequence ID" value="CTQ72930"/>
        <property type="gene ID" value="LAX5112_03372"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="6"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="38"/>
            <end position="45"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ72930.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="308" mass="33703" checksum="AB40B09989798F35" modified="2015-12-09" version="1">MSDIVIQAEGLVKSFKGFRAVDGLDLTIERGMIYGFLGPNGCGKTTAIRMLTGLLTPTEGSVEVLGLSVPKDAEALKYKIGYMTQAFSLYGDLTVLENLNFMGTVYGLTRAQRKERIAEVMDRYELTQLGDRFAGKMSGGQRQRLALAAAVLHGPQLLFLDEPTSAVDPESRRHFWEQLFDLVDEGTSIVVTTHFMDEAERCHKIAIMEAGQKRLDGTPGALMSSMGANVVEIEAPNLRDIRRHLLGTEGIMTAAQLGARLRVLVKDTIPDPEGFLKSNPQTASATIVEQVRPNLEDVFVTATGEGRQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFP4</accession>
    <name>A0A0M7AFP4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 5">Biotin carboxyl carrier protein of acetyl-CoA carboxylase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">accB</name>
        <name evidence="7" type="ORF">LAX5112_03542</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 5">This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2 5">Lipid metabolism; fatty acid biosynthesis.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73431.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672907.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03542"/>
    <dbReference type="EnsemblBacteria" id="CTQ73431">
        <property type="protein sequence ID" value="CTQ73431"/>
        <property type="gene ID" value="LAX5112_03542"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00094"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009317">
        <property type="term" value="C:acetyl-CoA carboxylase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003989">
        <property type="term" value="F:acetyl-CoA carboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006633">
        <property type="term" value="P:fatty acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001249">
        <property type="entry name" value="AcCoA_biotinCC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001882">
        <property type="entry name" value="Biotin_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000089">
        <property type="entry name" value="Biotin_lipoyl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011053">
        <property type="entry name" value="Single_hybrid_motif"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00364">
        <property type="entry name" value="Biotin_lipoyl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01071">
        <property type="entry name" value="ACOABIOTINCC"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51230">
        <property type="entry name" value="SSF51230"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00531">
        <property type="entry name" value="BCCP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00188">
        <property type="entry name" value="BIOTIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50968">
        <property type="entry name" value="BIOTINYL_LIPOYL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0092">Biotin</keyword>
    <keyword evidence="5" id="KW-0275">Fatty acid biosynthesis</keyword>
    <keyword evidence="5" id="KW-0276">Fatty acid metabolism</keyword>
    <keyword evidence="5" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="5" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lipoyl-binding" evidence="6">
        <location>
            <begin position="78"/>
            <end position="154"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003761"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00017562"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023267"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU364072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ73431.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="154" mass="15739" checksum="569CDCF56D9892D1" modified="2015-12-09" version="1">MNKDNKSFDTALIRDLAVLLDETNLSEIELEKGDTRIRVARQISISAPVSVAAPAAPAAAPAAAAAPAASPADAAPAQGTVASPMVGTAYTAAEPGAAPFVQVGDKVAEGQTILIIEAMKTMNHIPSTKAGTVKQILVEDAQPVEFGEPLIIVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AG48</accession>
    <name>A0A0M7AG48_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ</fullName>
            <ecNumber evidence="9">4.2.1.59</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase</fullName>
            <shortName evidence="9">(3R)-hydroxymyristoyl-ACP dehydrase</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="9">Beta-hydroxyacyl-ACP dehydratase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9 10" type="primary">fabZ</name>
        <name evidence="10" type="ORF">LAX5112_03454</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8 9">Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>a (3R)-hydroxyacyl-[ACP] = a (2E)-enoyl-[ACP] + H2O</text>
            <dbReference type="Rhea" id="RHEA:13097"/>
            <dbReference type="Rhea" id="RHEA-COMP:9925"/>
            <dbReference type="Rhea" id="RHEA-COMP:9945"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:78784"/>
            <dbReference type="ChEBI" id="CHEBI:78827"/>
            <dbReference type="EC" id="4.2.1.59"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the thioester dehydratase family. FabZ subfamily.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.59" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73190.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008192525.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03454"/>
    <dbReference type="EnsemblBacteria" id="CTQ73190">
        <property type="protein sequence ID" value="CTQ73190"/>
        <property type="gene ID" value="LAX5112_03454"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008659">
        <property type="term" value="F:(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008693">
        <property type="term" value="F:3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047451">
        <property type="term" value="F:3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004317">
        <property type="term" value="F:3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006633">
        <property type="term" value="P:fatty acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009245">
        <property type="term" value="P:lipid A biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00406">
        <property type="entry name" value="FabZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013114">
        <property type="entry name" value="FabA_FabZ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010084">
        <property type="entry name" value="FabZ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029069">
        <property type="entry name" value="HotDog_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30272">
        <property type="entry name" value="PTHR30272"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07977">
        <property type="entry name" value="FabA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54637">
        <property type="entry name" value="SSF54637"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01750">
        <property type="entry name" value="fabZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 9" id="KW-0441">Lipid A biosynthesis</keyword>
    <keyword evidence="4 9" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="6 9" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="7 9 10" id="KW-0456">Lyase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" evidence="9">
        <location>
            <position position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009174"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022556"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00025049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00406"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ73190.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="154" mass="17173" checksum="E0E0BB792A61E6F7" modified="2015-12-09" version="1">MDETEKTTLATADIMKVMKLLPHRYPFLLIDRIIEMDGDNSCIGIKNVTINEPQFQGHFPERPIFPGVLLIEAMAQTAGALCVHARGADAPPQLVYFMTIDRAKFRKPVEPGDQVHFHVKKIKQRANIWKFDAVAMVDGAKVAEAEVSAMLVDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AG66</accession>
    <name>A0A0M7AG66_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">N-acetylmuramoyl-L-alanine amidase</fullName>
            <ecNumber evidence="2">3.5.1.28</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">amiC_2</name>
        <name evidence="6" type="ORF">LAX5112_03537</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>Hydrolyzes the link between N-acetylmuramoyl residues and L-amino acid residues in certain cell-wall glycopeptides.</text>
            <dbReference type="EC" id="3.5.1.28"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="3.5.1.28" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73416.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03537"/>
    <dbReference type="EnsemblBacteria" id="CTQ73416">
        <property type="protein sequence ID" value="CTQ73416"/>
        <property type="gene ID" value="LAX5112_03537"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008745">
        <property type="term" value="F:N-acetylmuramoyl-L-alanine amidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009253">
        <property type="term" value="P:peptidoglycan catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd02696">
        <property type="entry name" value="MurNAc-LAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021731">
        <property type="entry name" value="AMIN_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002508">
        <property type="entry name" value="MurNAc-LAA_cat"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01520">
        <property type="entry name" value="Amidase_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11741">
        <property type="entry name" value="AMIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00646">
        <property type="entry name" value="Ami_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="21"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="domain" description="MurNAc-LAA" evidence="5">
        <location>
            <begin position="265"/>
            <end position="421"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001561"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011901"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM00646"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ73416.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="437" mass="47984" checksum="C10EA562BC7AD6C8" modified="2015-12-09" version="1">MRMADNTKLLRSPASSGLARVLTIASAVQLVIALAVLSLAIIMSAYGSQVLASEKPVISAARIAGDEDRTRIVFELNAQVTPVISALGTPYRLILDLPEVTFAFDKRAQNAEQGLVRDWRFGLFAVGKSRVVVDLVAPVRVDKTLFLPSIDDQPSRLVIDLVRASDEEFAKFVSDTRSKRTASREDAAPKTDLMTAQRANSKPVIVLDPGHGGIDYGAIGVGGTLEKAIVLEFSKLLRDKLLESDLYQIHLTRDDDTFIPLGERVQIGHDLAADLFISIHADSVVRGKKLARGATVYTLSDRASDDLAEELAASENMSDIIAGVELEEEPTEVTDILLDLARRETRSFSVYFAKTLIGEWQSAVRLIRNPHRSAGFRVLKAHDVPSVLVELGYLSNAHDEKLLISEEWRERMADAMTEAIHSFFRPRLAGRDGAVSQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AG99</accession>
    <name>A0A0M7AG99_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03471</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73240.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ73240">
        <property type="protein sequence ID" value="CTQ73240"/>
        <property type="gene ID" value="LAX5112_03471"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="32"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73240.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="343" mass="38260" checksum="037622460842BCB3" modified="2015-12-09" version="1">MALHDWSLPGQPLDPTHRLSRPQEVPPLPSEPCLPVHLNRNVFYLVPSDTTDDTKDDIGAFFRLGEYSEVERTAFENDHHDELFPAQHISDEGDDTSVYSNAAGGSQGILLACDGRILIKAAEKMYLETADYHQQANGDYTLDVDGDYTAAVEDSIDMSTENGGITVTSGRNQQIKINAGDGTGRLEIKSQAESKNIQGKSDHTYHKWHTVKYKDSYESHKFGWDFNSIYGFSMTTFYGGIMETVYGLRMQFDKFNFMSDWVSFNWKGTQIDLKGIVMKKITAKFGMTDCSAEWDEIMVGLQGLKAEATRLEAKRKELAVQSGGVDLKNHGTGARLVGIECVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGA4</accession>
    <name>A0A0M7AGA4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Probable nicotinate-nucleotide adenylyltransferase</fullName>
            <ecNumber evidence="7">2.7.7.18</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Deamido-NAD(+) diphosphorylase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">Deamido-NAD(+) pyrophosphorylase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">Nicotinate mononucleotide adenylyltransferase</fullName>
            <shortName evidence="7">NaMN adenylyltransferase</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7 9" type="primary">nadD</name>
        <name evidence="9" type="ORF">LAX5112_03617</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2 7">Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>ATP + H(+) + nicotinate beta-D-ribonucleotide = deamido-NAD(+) + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:22860"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57502"/>
            <dbReference type="ChEBI" id="CHEBI:58437"/>
            <dbReference type="EC" id="2.7.7.18"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3 7">Cofactor biosynthesis; NAD(+) biosynthesis; deamido-NAD(+) from nicotinate D-ribonucleotide: step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4 7">Belongs to the NadD family.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.18" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73667.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672969.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03617"/>
    <dbReference type="EnsemblBacteria" id="CTQ73667">
        <property type="protein sequence ID" value="CTQ73667"/>
        <property type="gene ID" value="LAX5112_03617"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00253">
        <property type="reaction ID" value="UER00332"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004515">
        <property type="term" value="F:nicotinate-nucleotide adenylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009435">
        <property type="term" value="P:NAD biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd02165">
        <property type="entry name" value="NMNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00244">
        <property type="entry name" value="NaMN_adenylyltr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004821">
        <property type="entry name" value="Cyt_trans-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005248">
        <property type="entry name" value="NadD/NMNAT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01467">
        <property type="entry name" value="CTP_transf_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00482">
        <property type="entry name" value="TIGR00482"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6 7" id="KW-0520">NAD</keyword>
    <keyword evidence="7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7 9" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="5 7" id="KW-0662">Pyridine nucleotide biosynthesis</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 9" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="CTP_transf_like" evidence="8">
        <location>
            <begin position="28"/>
            <end position="207"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001785"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00002324"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005019"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00009014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022642"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF01467"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ73667.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="209" mass="23408" checksum="558903928E22220A" modified="2015-12-09" version="1">MSKLSSSQGRHQDWLKLPHCEAGNRIGIFGGSFNPPHSGHKMVADTVLKRLGLDQVWWFVTPGNPLKSHSELAPLEMRLHLTSALSNHPRMKVTAYEKVLGTPYTAKTLQALRSRNPSVRFVWVMGADNLAGFHHWQDWRGILGTVPVAVVDRPGASLSVLSSPMAKAYEKYRLPEEDAGLLPDMDPPVWTFLHTPLDQTSSTDLRRKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGQ3</accession>
    <name>A0A0M7AGQ3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03299</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72784.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672722.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72784">
        <property type="protein sequence ID" value="CTQ72784"/>
        <property type="gene ID" value="LAX5112_03299"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="9"/>
            <end position="32"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72784.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="104" mass="12442" checksum="A78632BA98A56CD0" modified="2015-12-09" version="1">MTSRPSYKQRLAKKAERQRDYRRRIKKENRPTRNDITATLFHYMVRRTDKIDEWKKFNGLMSKVTDALVERGFDRAASEKAIDSLVDRIVDGQEFRRRLPPEDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGW7</accession>
    <name>A0A0M7AGW7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">K(+)/H(+) antiporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">kefC_3</name>
        <name evidence="7" type="ORF">LAX5112_03552</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73460.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672914.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ73460">
        <property type="protein sequence ID" value="CTQ73460"/>
        <property type="gene ID" value="LAX5112_03552"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015299">
        <property type="term" value="F:solute:proton antiporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006813">
        <property type="term" value="P:potassium ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1530.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006153">
        <property type="entry name" value="Cation/H_exchanger"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038770">
        <property type="entry name" value="Na+/solute_symporter_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003148">
        <property type="entry name" value="RCK_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00999">
        <property type="entry name" value="Na_H_Exchanger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02254">
        <property type="entry name" value="TrkA_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51201">
        <property type="entry name" value="RCK_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0406">Ion transport</keyword>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="21"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="52"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="82"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="111"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="143"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="169"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="197"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="271"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="302"/>
            <end position="323"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="329"/>
            <end position="347"/>
        </location>
    </feature>
    <feature type="domain" description="RCK N-terminal" evidence="6">
        <location>
            <begin position="383"/>
            <end position="505"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51201"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ73460.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="529" mass="56539" checksum="F09BEE5A0B6E7754" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGZ3</accession>
    <name>A0A0M7AGZ3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03689</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ73907.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ73907">
        <property type="protein sequence ID" value="CTQ73907"/>
        <property type="gene ID" value="LAX5112_03689"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ73907.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="136" mass="15450" checksum="D22CD898709D5618" modified="2015-12-09" version="1">MVRSDRDAAFRWPVILPGDMEEDGTALALDRRIHVAIQDDDDVVQPVITPHFLVTGLKRQIHQTIVAGMARIIAPAEFRLQNFKWKNRLRRSAFVSAIVYMQELECSCWGRSVPFPLACDDAGTAQRTRNRDRSAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AH10</accession>
    <name>A0A0M7AH10_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Ferric uptake regulation protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">fur_2</name>
        <name evidence="2" type="synonym">fur</name>
        <name evidence="3" type="ORF">LAX5112_03790</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Acts as a global negative controlling element, employing Fe(2+) as a cofactor to bind the operator of the repressed genes.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the Fur family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74189.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03790"/>
    <dbReference type="EnsemblBacteria" id="CTQ74189">
        <property type="protein sequence ID" value="CTQ74189"/>
        <property type="gene ID" value="LAX5112_03790"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd07153">
        <property type="entry name" value="Fur_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002481">
        <property type="entry name" value="FUR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33202">
        <property type="entry name" value="PTHR33202"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01475">
        <property type="entry name" value="FUR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2" id="KW-0408">Iron</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0678">Repressor</keyword>
    <keyword evidence="2" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="2" id="KW-0862">Zinc</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002997"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU364037"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ74189.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="143" mass="15765" checksum="8DB861462A594E3E" modified="2015-12-09" version="1">MAIEIVTETAGKDVTDMLRDAGLRPTRQRVSLAELLYSKGDRHLSAELLHEEAVAADVPVSLATVYNTLHQFTEAGLLREVAIEGNKTYFDTKVSDHHHFFIEGENKVIDIPGEGVGIGVLPDIPEGMEVVHVDVVVRLRKKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHD4</accession>
    <name>A0A0M7AHD4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 3">Diaminopimelate decarboxylase</fullName>
            <shortName evidence="2">DAP decarboxylase</shortName>
            <shortName evidence="2">DAPDC</shortName>
            <ecNumber evidence="2 3">4.1.1.20</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2 6" type="primary">lysA</name>
        <name evidence="6" type="ORF">LAX5112_03719</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Specifically catalyzes the decarboxylation of meso-diaminopimelate (meso-DAP) to L-lysine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2 3">
            <text>H(+) + meso-2,6-diaminoheptanedioate = CO2 + L-lysine</text>
            <dbReference type="Rhea" id="RHEA:15101"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:32551"/>
            <dbReference type="ChEBI" id="CHEBI:57791"/>
            <dbReference type="EC" id="4.1.1.20"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 2 3">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="2 3">Amino-acid biosynthesis; L-lysine biosynthesis via DAP pathway; L-lysine from DL-2,6-diaminopimelate: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the Orn/Lys/Arg decarboxylase class-II family. LysA subfamily.</text>
    </comment>
    <dbReference type="EC" id="4.1.1.20" evidence="2 3"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ73991.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673053.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03719"/>
    <dbReference type="EnsemblBacteria" id="CTQ73991">
        <property type="protein sequence ID" value="CTQ73991"/>
        <property type="gene ID" value="LAX5112_03719"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00034">
        <property type="reaction ID" value="UER00027"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008836">
        <property type="term" value="F:diaminopimelate decarboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009089">
        <property type="term" value="P:lysine biosynthetic process via diaminopimelate"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd06828">
        <property type="entry name" value="PLPDE_III_DapDC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.37.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02120">
        <property type="entry name" value="LysA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009006">
        <property type="entry name" value="Ala_racemase/Decarboxylase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002986">
        <property type="entry name" value="DAP_deCOOHase_LysA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022643">
        <property type="entry name" value="De-COase2_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022644">
        <property type="entry name" value="De-COase2_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022653">
        <property type="entry name" value="De-COase2_pyr-phos_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000183">
        <property type="entry name" value="Orn/DAP/Arg_de-COase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029066">
        <property type="entry name" value="PLP-binding_barrel"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02784">
        <property type="entry name" value="Orn_Arg_deC_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00278">
        <property type="entry name" value="Orn_DAP_Arg_deC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01181">
        <property type="entry name" value="DAPDCRBXLASE"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01179">
        <property type="entry name" value="ODADCRBXLASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50621">
        <property type="entry name" value="SSF50621"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51419">
        <property type="entry name" value="SSF51419"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01048">
        <property type="entry name" value="lysA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00878">
        <property type="entry name" value="ODR_DC_2_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="2 3" id="KW-0210">Decarboxylase</keyword>
    <keyword evidence="2 3 6" id="KW-0456">Lyase</keyword>
    <keyword evidence="2 3" id="KW-0457">Lysine biosynthesis</keyword>
    <keyword evidence="2" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Orn_DAP_Arg_deC" evidence="4">
        <location>
            <begin position="29"/>
            <end position="373"/>
        </location>
    </feature>
    <feature type="domain" description="Orn_Arg_deC_N" evidence="5">
        <location>
            <begin position="36"/>
            <end position="281"/>
        </location>
    </feature>
    <feature type="region of interest" description="Pyridoxal phosphate binding" evidence="2">
        <location>
            <begin position="275"/>
            <end position="278"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="239"/>
        </location>
        <ligand>
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="278"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="314"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="318"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="347"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="375"/>
        </location>
    </feature>
    <feature type="modified residue" description="N6-(pyridoxal phosphate)lysine" evidence="2">
        <location>
            <position position="60"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02120"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU003738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00278"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF02784"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ73991.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="424" mass="46291" checksum="B8C6EBB52F75F126" modified="2015-12-09" version="1">MHHFDYKGGALFAEDVAIEEIAREVGTPFYVYSTATLTRHYEVFSSAFADIPSLVCYAMKANSNQAVLATLAQLGAGMDVVSEGELRRARAAGVPANKIVFSGVGKTEAEQAYALTEDILCFNVESEPELHQLSRVATQMGKTARVSMRINPDVDAKTHEKIATGKAENKFGIPWQRAREVYATAASLPGLKVTGIDMHIGSQITELEPFDSAFARLGELITDLRGQGHTIDHVDLGGGLGIPYVTDNDPPPHPDAYAEVVKKHVRELDCKVMFEPGRMIAGNAGILVTQVIYVKEGADKNFVIVDAGMNDLIRPTLYEAYHEVRPVSEPDVNADRFRADVVGPVCETGDFLAQNRDMPKVNAGDMLAVYSAGAYGSVQSSTYNSRLLVPEVLVNADQFAVIRPRPSYEELLDLDKIPDWLKTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIQ0</accession>
    <name>A0A0M7AIQ0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Protein translocase subunit SecD</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">secD</name>
        <name evidence="10" type="ORF">LAX5112_04068</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.</text>
    </comment>
    <comment type="subunit">
        <text evidence="9">Forms a complex with SecF. Part of the essential Sec protein translocation apparatus which comprises SecA, SecYEG and auxiliary proteins SecDF-YajC and YidC.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cell membrane</location>
            <topology evidence="9">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the SecD/SecF family. SecD subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ74978.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008188918.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04068"/>
    <dbReference type="EnsemblBacteria" id="CTQ74978">
        <property type="protein sequence ID" value="CTQ74978"/>
        <property type="gene ID" value="LAX5112_04068"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015450">
        <property type="term" value="F:protein-transporting ATPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0065002">
        <property type="term" value="P:intracellular protein transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006605">
        <property type="term" value="P:protein targeting"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043952">
        <property type="term" value="P:protein transport by the Sec complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01463_B">
        <property type="entry name" value="SecD_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001036">
        <property type="entry name" value="Acrflvin-R"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005791">
        <property type="entry name" value="SecD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022813">
        <property type="entry name" value="SecD/SecF_arch_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022645">
        <property type="entry name" value="SecD/SecF_bac"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30081">
        <property type="entry name" value="PTHR30081"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02355">
        <property type="entry name" value="SecD_SecF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00702">
        <property type="entry name" value="ACRIFLAVINRP"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00916">
        <property type="entry name" value="2A0604s01"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01129">
        <property type="entry name" value="secD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 9" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="5 9" id="KW-0653">Protein transport</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 9" id="KW-0811">Translocation</keyword>
    <keyword evidence="4 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2 9" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="377"/>
            <end position="394"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="399"/>
            <end position="421"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="427"/>
            <end position="449"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="470"/>
            <end position="492"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="498"/>
            <end position="526"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023010"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01463"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ74978.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="536" mass="58086" checksum="5E6F447F964ED4D8" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJ29</accession>
    <name>A0A0M7AJ29_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 6">30S ribosomal protein S18</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6 8" type="primary">rpsR</name>
        <name evidence="8" type="ORF">LAX5112_03864</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 6">Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Part of the 30S ribosomal subunit. Forms a tight heterodimer with protein S6.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 6 7">Belongs to the bacterial ribosomal protein bS18 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74442.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008195755.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03864"/>
    <dbReference type="EnsemblBacteria" id="CTQ74442">
        <property type="protein sequence ID" value="CTQ74442"/>
        <property type="gene ID" value="LAX5112_03864"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00270">
        <property type="entry name" value="Ribosomal_S18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001648">
        <property type="entry name" value="Ribosomal_S18"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018275">
        <property type="entry name" value="Ribosomal_S18_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036870">
        <property type="entry name" value="Ribosomal_S18_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13479">
        <property type="entry name" value="PTHR13479"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01084">
        <property type="entry name" value="Ribosomal_S18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00974">
        <property type="entry name" value="RIBOSOMALS18"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46911">
        <property type="entry name" value="SSF46911"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00165">
        <property type="entry name" value="S18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00057">
        <property type="entry name" value="RIBOSOMAL_S18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 6 7" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="4 6 7" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="6" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="6" id="KW-0699">rRNA-binding</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003369"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005589"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00015697"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00270"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003910"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ74442.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="82" mass="9487" checksum="16EB006730E6B706" modified="2015-12-09" version="1">MVDISQTPSRRPFFRRRKTCPFSGSNAPKIDYKDIRLLQRYISERGKIVPSRITAVSAKKQRELSRAIKRARLLGLLPFVIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJ66</accession>
    <name>A0A0M7AJ66_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03822</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74280.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673127.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74280">
        <property type="protein sequence ID" value="CTQ74280"/>
        <property type="gene ID" value="LAX5112_03822"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ74280.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="73" mass="8162" checksum="81CD0FA92C22FFCE" modified="2015-12-09" version="1">MAHSLFEPDPMPFHEKLMRRMRDLSGHAPAQIPKMSARLAAADPGLVRQAKRLDARGQQLLLEVVFDAETPAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJ72</accession>
    <name>A0A0M7AJ72_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04041</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ74929.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673330.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04041"/>
    <dbReference type="EnsemblBacteria" id="CTQ74929">
        <property type="protein sequence ID" value="CTQ74929"/>
        <property type="gene ID" value="LAX5112_04041"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809391" evidence="1">
        <location>
            <begin position="24"/>
            <end position="123"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74929.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="123" mass="13162" checksum="100191A3503F8B1C" modified="2015-12-09" version="1">MLGIRAICAAGIFSVLVSGASVAGDVEIVDAKAKDGAGGWTFSVTLKHGDTGWDHYADLWEVYTPDGDLLGRRVLAHPHVNEQPFTRSLSGVQIPDGVTTVIIRARDSVHGVSPQELEIDLNR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJA1</accession>
    <name>A0A0M7AJA1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Chemotaxis protein CheY</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">cheY_6</name>
        <name evidence="3" type="ORF">LAX5112_03948</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74717.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03948"/>
    <dbReference type="EnsemblBacteria" id="CTQ74717">
        <property type="protein sequence ID" value="CTQ74717"/>
        <property type="gene ID" value="LAX5112_03948"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="2">
        <location>
            <begin position="1"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="domain" description="Response regulatory" evidence="2">
        <location>
            <begin position="125"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="1">
        <location>
            <position position="52"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="1">
        <location>
            <position position="176"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ74717.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="265" mass="29466" checksum="E32FAB9313AA073D" modified="2015-12-09" version="1">MIADDSSIARDIVAEGIQAHRGERYIEIEQASNGRAALEILQAKRIDVAFVDIHMPGLNGPEVVSAMRDTQSNDCLTVAMSSSLDDKAESVLKRFGAYHFLQKPFGPAEISEIIATYRMMTRSYPILVVDDSGTMRKLTRKVLESSRFEFEISDADSADAALKALSRGKFELVLTDFHMPGIDGLELAGSIRDLSSKVGIYMMSTNDTTYLERSAAFVGISGFLKKPFNAADIDMLMHDYLEIDKPKFGKVRDVFSFIERERKAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AK34</accession>
    <name>A0A0M7AK34_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF1737 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03706</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ73954.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008193065.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03706"/>
    <dbReference type="EnsemblBacteria" id="CTQ73954">
        <property type="protein sequence ID" value="CTQ73954"/>
        <property type="gene ID" value="LAX5112_03706"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013619">
        <property type="entry name" value="DUF1737"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08410">
        <property type="entry name" value="DUF1737"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF1737" evidence="1">
        <location>
            <begin position="1"/>
            <end position="53"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08410"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73954.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="67" mass="7511" checksum="DFCA72CF59E0D956" modified="2015-12-09" version="1">MKLYRFITNVDSSEFCHRVTEALNKGWELSGSPSLTYDATKGETICGQAVTKEVDGDYSRDIKLGDY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKC6</accession>
    <name>A0A0M7AKC6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04007</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74856.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74856">
        <property type="protein sequence ID" value="CTQ74856"/>
        <property type="gene ID" value="LAX5112_04007"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809497" evidence="1">
        <location>
            <begin position="25"/>
            <end position="168"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74856.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="168" mass="18191" checksum="3198408C5F38D694" modified="2015-12-09" version="1">MIQLIQNACTSGAFKAVCVATVLAASTLPSSAFDSHAGYYYPAPQTSEPYISNVDTALDANKRSRAAFVIGLAAQQSKQAYAPGYHLFAKGAELEKLIIVATGDGQYDTLYRMRALLASLTSMARGTELFARTDQPQELNFLDFCKLIGFKQVTVSNGKDVTHQIKVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AL50</accession>
    <name>A0A0M7AL50_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">3-oxoacyl-[acyl-carrier-protein] reductase FabG</fullName>
            <ecNumber evidence="1">1.1.1.100</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">fabG_10</name>
        <name evidence="1" type="ORF">LAX5112_04389</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.1.1.100" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75865.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673606.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000023.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04389"/>
    <dbReference type="EnsemblBacteria" id="CTQ75865">
        <property type="protein sequence ID" value="CTQ75865"/>
        <property type="gene ID" value="LAX5112_04389"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004316">
        <property type="term" value="F:3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ75865.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="250" mass="26391" checksum="04828EF19D6D76DC" modified="2015-12-09" version="1">MTEKIALVTGAARGIGLATTKLLIEKGWKVAMVDRDRAELKSASAGINAGSAFIYDVSIPDDVDEMMTKIIEHFGRLDAVVNNAGVANFGPIEEANLSLWRTVMATNLDGVFMVSQAAVPHLKKTRGAIVNIGSISGLRASTLRVAYGTSKAAVIHLTKQQAAELGEYGIRANCVCPGPVRTKLAMAVHTQEIIDAYHDAIPLNRYGSEAEIASVIAFLCSEEASYVTGQVIASDGGFDSTGVGLPALRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALS9</accession>
    <name>A0A0M7ALS9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Bifunctional enoyl-CoA hydratase/phosphate acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04462</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ76088.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76088">
        <property type="protein sequence ID" value="CTQ76088"/>
        <property type="gene ID" value="LAX5112_04462"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029069">
        <property type="entry name" value="HotDog_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002539">
        <property type="entry name" value="MaoC-like_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01575">
        <property type="entry name" value="MaoC_dehydratas"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54637">
        <property type="entry name" value="SSF54637"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="MaoC-like" evidence="1">
        <location>
            <begin position="35"/>
            <end position="146"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01575"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76088.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="168" mass="18136" checksum="D6C7EFF8B55DBF7A" modified="2015-12-09" version="1">MGLTPDHAPMRVFGRMTQSPRLVGPGFYWQDFSAGDRYRTLARTITEADIIAFVGVTGMTEVLFTDQTFGQGVAARGRVAPAALTYTLIEGIQCQTLIQATGLALLEVDKKVLAPVTAGDTVHAIVEVLEVRQTSKGNRAVVTTRNDIVNQNGEAVITYTAKRLIAGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMK8</accession>
    <name>A0A0M7AMK8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Phage major capsid protein, HK97 family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04397</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75887.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04397"/>
    <dbReference type="EnsemblBacteria" id="CTQ75887">
        <property type="protein sequence ID" value="CTQ75887"/>
        <property type="gene ID" value="LAX5112_04397"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024455">
        <property type="entry name" value="Phage_capsid"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05065">
        <property type="entry name" value="Phage_capsid"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01554">
        <property type="entry name" value="major_cap_HK97"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="37"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75887.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="440" mass="47645" checksum="E63B3FDD27D81336" modified="2015-12-09" version="1">MTGLSDWTPDDLPLETKADMPGGLPPVPAAPTTDATGGDDVARTFDAFFRTFESYRAVNDARLAEIESRGSADVVSLEKLDRLDAALDATQRRLDDLTLKSRRPQIGRQGRRQMTSAALEHKAAFETYVRSGREQPLRPLEVKALSAGSDPDGGYLVPEETEAGIMRRLSQVSPIRAISGIRQVSSSTYKKPFAVTGPQSGWVGETAARPQTNSPQLAELTFPAMELYAMPAATSTLLDDAAVDMDQWIAEEVEAAFAEQEGAAFVNGDGVNKPLGFLQAPRVAENSWAWGSLGTMPTGAAGAFPASDAGDTLIDLIYSLKSGYRQNGRFVMNRKTQSEIRKLKDGDGTYLWQPPAGVDGAATLLNFPITEAEDMPDIANDAPAVAFGDFRRGYLVVDRMGVRLLRDPYSAKPYVLFYTTKRVGGGVQDYDAIKLLMFSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMQ7</accession>
    <name>A0A0M7AMQ7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Intercellular adhesion protein R</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">icaR</name>
        <name evidence="3" type="ORF">LAX5112_04022</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74884.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673305.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74884">
        <property type="protein sequence ID" value="CTQ74884"/>
        <property type="gene ID" value="LAX5112_04022"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023772">
        <property type="entry name" value="DNA-bd_HTH_TetR-type_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036271">
        <property type="entry name" value="Tet_transcr_reg_TetR-rel_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039536">
        <property type="entry name" value="TetR_C_Proteobacteria"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14246">
        <property type="entry name" value="TetR_C_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00440">
        <property type="entry name" value="TetR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00455">
        <property type="entry name" value="HTHTETR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48498">
        <property type="entry name" value="SSF48498"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01081">
        <property type="entry name" value="HTH_TETR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50977">
        <property type="entry name" value="HTH_TETR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH tetR-type" evidence="2">
        <location>
            <begin position="5"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="1">
        <location>
            <begin position="28"/>
            <end position="47"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ74884.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="206" mass="23102" checksum="C6C7AE1C025DA46C" modified="2015-12-09" version="1">MSVSDQKKKQIVEAAIAEFQEKGFAGASMDRISERAQVSKRTVYNHFESKETLFKAINQCLADQVNSALEVPYDRDKPIRDALIELGWAEGELMVSPCFMNLARMVMSETIRDPELAADMNARMTKLSIFADFMERATSDGRLSVQDPAVAAEQFLGLIKSRSFFPNIYANRVAERDEMDKIINESVDLFLAQYAAPETEAAKKSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMR3</accession>
    <name>A0A0M7AMR3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Mannitol 2-dehydrogenase</fullName>
            <ecNumber evidence="3">1.1.1.67</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">mtlK</name>
        <name evidence="3" type="ORF">LAX5112_04591</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.1.1.67" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000026">
        <property type="protein sequence ID" value="CTQ76425.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673776.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000026.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04591"/>
    <dbReference type="EnsemblBacteria" id="CTQ76425">
        <property type="protein sequence ID" value="CTQ76425"/>
        <property type="gene ID" value="LAX5112_04591"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050086">
        <property type="term" value="F:mannitol 2-dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1040.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008927">
        <property type="entry name" value="6-PGluconate_DH-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013328">
        <property type="entry name" value="6PGD_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000669">
        <property type="entry name" value="Mannitol_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013118">
        <property type="entry name" value="Mannitol_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013131">
        <property type="entry name" value="Mannitol_DH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01232">
        <property type="entry name" value="Mannitol_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08125">
        <property type="entry name" value="Mannitol_dh_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00084">
        <property type="entry name" value="MTLDHDRGNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48179">
        <property type="entry name" value="SSF48179"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Mannitol_dh" evidence="1">
        <location>
            <begin position="32"/>
            <end position="195"/>
        </location>
    </feature>
    <feature type="domain" description="Mannitol_dh_C" evidence="2">
        <location>
            <begin position="224"/>
            <end position="465"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01232"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF08125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ76425.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="505" mass="55514" checksum="C7DDD33A2A85E527" modified="2015-12-09" version="1">MDELIPLSDATLSTVPSRVTKPRYDRSALTPGIVHIGVGNFHRAHQAWYLHRLIQDGHAYDWAIIGAGVRPYDAAMRDKLVAQDCLTTLVELNPSKTSAEIVGSMTGYLPIAADNAPLIQQMADPAIRIVALTVTEGGYYIDPVTKEFDRRHADIQHDAQHPETPKTAFGAMVAALKLRRDQGHGPFTGLSCDNLLANGQILRQTVLGLSRLSDPDLADWIDANCTFPNSMVDCIVPATGSREIALAHEFGLDDQAPVSHETFRQWVLEDRFCAGRPEWEKVGATFTDNVHGYEMMKLRLLNAGHQVIANAGEILSLSTIADCMAHPLISAMFSKVLKDEIVPHVSAVPNMTPAQYVDLIRSRFSNPAVLDTTRRVAFDGSSRHTGFVLPAIEDGLEKGTPIEGLALVEALWARMCEGSREDGSRIEPNDPYWSQRTDAAQNARLRPLAWLEQSDVYGDLAANARFATAFEHWLGRIWSDGCETALREYLQIAQTATARSASNPG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANC8</accession>
    <name>A0A0M7ANC8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Phage protein U</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04408</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75916.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673619.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000023.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04408"/>
    <dbReference type="EnsemblBacteria" id="CTQ75916">
        <property type="protein sequence ID" value="CTQ75916"/>
        <property type="gene ID" value="LAX5112_04408"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009734">
        <property type="entry name" value="Myoviridae_GpU"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06995">
        <property type="entry name" value="Phage_P2_GpU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ75916.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="146" mass="15845" checksum="0DCA0381E02AF555" modified="2015-12-09" version="1">MLYMIGTLAMDTRPFNADEVTRNSTADHAEKPVIGGLAPSEFTGEGKDEISLSGLLIPSKIGGLTELETAHQMRMSGTRVPVMRGDGVRLGTFAITKMSETHRDLLRNGVGFSVKYTITLKKVQPDDDEASSVISGLLNLFDAFRN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANF7</accession>
    <name>A0A0M7ANF7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">DNA-invertase hin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">hin</name>
        <name evidence="7" type="ORF">LAX5112_04419</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75946.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75946">
        <property type="protein sequence ID" value="CTQ75946"/>
        <property type="gene ID" value="LAX5112_04419"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000150">
        <property type="term" value="F:DNA strand exchange activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1390">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006118">
        <property type="entry name" value="Recombinase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006119">
        <property type="entry name" value="Resolv_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036162">
        <property type="entry name" value="Resolvase-like_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00239">
        <property type="entry name" value="Resolvase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00857">
        <property type="entry name" value="Resolvase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53041">
        <property type="entry name" value="SSF53041"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00397">
        <property type="entry name" value="RECOMBINASES_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00398">
        <property type="entry name" value="RECOMBINASES_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51736">
        <property type="entry name" value="RECOMBINASES_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0229">DNA integration</keyword>
    <keyword evidence="3" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Resolvase/invertase-type recombinase catalytic" evidence="6">
        <location>
            <begin position="1"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="active site" description="O-(5'-phospho-DNA)-serine intermediate" evidence="4 5">
        <location>
            <position position="8"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022908"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR606118-50"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10137"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51736"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ75946.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="200" mass="23286" checksum="1529430042D676A7" modified="2015-12-09" version="1">MFGYARVSTEDQNLDLQIRALKDYGCGQIFQEKRSAYGVKRRQLEILKLHLQEGDTLVVWKLDRLGRSVAELIELMAYFEKWEVNFVSLQDSIDTRTAMGKFMFHLLASLAQLERDLTAERTKAGMEAARKRGFKPGPPTLLQRMDKKELRALRKDLADPTMSWRDLHKKYGYAVATLRRHFEEERKAFLLKMAADDEKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AP87</accession>
    <name>A0A0M7AP87_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Cryptochrome-like protein cry2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">cry2</name>
        <name evidence="7" type="ORF">LAX5112_04749</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>(6R)-5,10-methylene-5,6,7,8-tetrahydrofolate</name>
            <dbReference type="ChEBI" id="CHEBI:15636"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <dbReference type="EMBL" id="CXWD01000030">
        <property type="protein sequence ID" value="CTQ76935.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673947.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000030.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04749"/>
    <dbReference type="EnsemblBacteria" id="CTQ76935">
        <property type="protein sequence ID" value="CTQ76935"/>
        <property type="gene ID" value="LAX5112_04749"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036134">
        <property type="entry name" value="Crypto/Photolyase_FAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036155">
        <property type="entry name" value="Crypto/Photolyase_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005101">
        <property type="entry name" value="Cryptochr/Photolyase_FAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002081">
        <property type="entry name" value="Cryptochrome/DNA_photolyase_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006050">
        <property type="entry name" value="DNA_photolyase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11455">
        <property type="entry name" value="PTHR11455"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00875">
        <property type="entry name" value="DNA_photolyase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03441">
        <property type="entry name" value="FAD_binding_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48173">
        <property type="entry name" value="SSF48173"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52425">
        <property type="entry name" value="SSF52425"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51645">
        <property type="entry name" value="PHR_CRY_ALPHA_BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0274">FAD</keyword>
    <keyword evidence="3" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Photolyase/cryptochrome alpha/beta" evidence="6">
        <location>
            <begin position="4"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="476"/>
            <end position="519"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="489"/>
            <end position="507"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51645"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ76935.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="519" mass="58959" checksum="256E4B2207A77009" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARE5</accession>
    <name>A0A0M7ARE5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04776</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000030">
        <property type="protein sequence ID" value="CTQ77012.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77012">
        <property type="protein sequence ID" value="CTQ77012"/>
        <property type="gene ID" value="LAX5112_04776"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ77012.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="82" mass="9373" checksum="C729E5B882D46A0E" modified="2015-12-09" version="1">MIKKRLLSNCISGELERSKDPLAAERLNVYERVQNKLDGFRFAAMHNNTARRCFAFPIVVNLGDLVFGMINPADLQRMSFGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARE9</accession>
    <name>A0A0M7ARE9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Putative membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">LAX5112_04843</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000032">
        <property type="protein sequence ID" value="CTQ77227.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673991.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000032.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04843"/>
    <dbReference type="EnsemblBacteria" id="CTQ77227">
        <property type="protein sequence ID" value="CTQ77227"/>
        <property type="gene ID" value="LAX5112_04843"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016757">
        <property type="term" value="F:glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038731">
        <property type="entry name" value="RgtA/B/C-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13231">
        <property type="entry name" value="PMT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="3" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="5 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="68"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="102"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="125"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="149"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="192"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="242"/>
            <end position="263"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="288"/>
            <end position="307"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="319"/>
            <end position="337"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="343"/>
            <end position="364"/>
        </location>
    </feature>
    <feature type="domain" description="PMT_2" evidence="9">
        <location>
            <begin position="49"/>
            <end position="210"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF13231"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ77227.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="506" mass="56414" checksum="AFF4E2DBDA1089C1" modified="2015-12-09" version="1">MNASRAALLYAGILCLLYALVPSLSFPNPPLDVVEGFAWGRDIQLGYTKHPPMQAWLLELSYHLTGGYAYGAYWLSAISIGIGYRFIWLIGKELGFSEQQRFWAIVLTSVTFYFTLPVPEFNPNILQIPVWAGMIYFFLRALNSGAARYWILLGALAAIGFYTKYFVFLLIGTIGLYTLVYADGRRYLATSGPWICSVSFLLLVAPHLYWLYETDFLTFRYAIGRSNAAGSLFDHVYNPVNFLLAQVANHAGLFMVALLGLSWQTLKTAKTSWSFSRGSLPTLEADRFLIWFALVPLFVVLLASAVTGSEFKHMWGTPLFVLSGLVAVRYFHLPAFWSAPKRAFAGAVGIQVLFLGILLGQAVLEPFWKTKQSRIHYPGKATAEVLSDVWKKETGTELAYVAGDEWTTANVTLHAPSRPSMFLEHNAILSPWIDLDDVQKKGVMILWRGENSAPAGQILELYPNAVLQGQQTLPFHSYGTFPDLTINWIIVPPGSVATSVDEELAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARN9</accession>
    <name>A0A0M7ARN9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Glutathione transport system permease protein GsiC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">gsiC_4</name>
        <name evidence="8" type="ORF">LAX5112_04806</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="6">Cell membrane</location>
            <topology evidence="6">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000031">
        <property type="protein sequence ID" value="CTQ77112.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451209.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000031.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04806"/>
    <dbReference type="EnsemblBacteria" id="CTQ77112">
        <property type="protein sequence ID" value="CTQ77112"/>
        <property type="gene ID" value="LAX5112_04806"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045621">
        <property type="entry name" value="BPD_transp_1_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19300">
        <property type="entry name" value="BPD_transp_1_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="100"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="130"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="175"/>
            <end position="199"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="245"/>
            <end position="269"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="289"/>
            <end position="315"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="7">
        <location>
            <begin position="94"/>
            <end position="312"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ77112.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="324" mass="36337" checksum="1F87F75ECF52434A" modified="2015-12-09" version="1">MIGFATRRLLQAMIVMLVVALLAFTMFRFVGDPINQMVGIETSIEEREALRERLGLNDPIPVQFARFIGNAVQFDFGTSYQFKQPVSELFAKRIPATLELSFASFMFALVVGIPMGIYAGLNRESAISKLFLSVSLIGISLPTFFIGILLIFLFSVTLQWLPSFGRGDVVQVGSWWTTGFLTVSGLKALILPAVTLGMYQMTLIMRLIRAEMLEVIRTDYIKFARARGLPDRLVHFRHALKNTMVPVITITGLQLGSIIAFATITETVFQWPGMGLMFLQAVQNVDIPIMSAYLLLTAFLFVAINFIVDILYFFIDPRLRVGRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="31" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARQ1</accession>
    <name>A0A0M7ARQ1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 9 10">Xylose isomerase</fullName>
            <ecNumber evidence="2 9 10">5.3.1.5</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9 13" type="primary">xylA</name>
        <name evidence="13" type="ORF">LAX5112_04747</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="8 9 10">
            <text>alpha-D-xylose = alpha-D-xylulofuranose</text>
            <dbReference type="Rhea" id="RHEA:22816"/>
            <dbReference type="ChEBI" id="CHEBI:28518"/>
            <dbReference type="ChEBI" id="CHEBI:188998"/>
            <dbReference type="EC" id="5.3.1.5"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="9">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="9">Binds 2 magnesium ions per subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="9 11">Homotetramer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9 11">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 9 10">Belongs to the xylose isomerase family.</text>
    </comment>
    <dbReference type="EC" id="5.3.1.5" evidence="2 9 10"/>
    <dbReference type="EMBL" id="CXWD01000030">
        <property type="protein sequence ID" value="CTQ76930.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673946.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000030.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04747"/>
    <dbReference type="EnsemblBacteria" id="CTQ76930">
        <property type="protein sequence ID" value="CTQ76930"/>
        <property type="gene ID" value="LAX5112_04747"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009045">
        <property type="term" value="F:xylose isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042732">
        <property type="term" value="P:D-xylose metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00455">
        <property type="entry name" value="Xylose_isom_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036237">
        <property type="entry name" value="Xyl_isomerase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013022">
        <property type="entry name" value="Xyl_isomerase-like_TIM-brl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013452">
        <property type="entry name" value="Xylose_isom_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001998">
        <property type="entry name" value="Xylose_isomerase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01261">
        <property type="entry name" value="AP_endonuc_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00688">
        <property type="entry name" value="XYLOSISMRASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51658">
        <property type="entry name" value="SSF51658"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02630">
        <property type="entry name" value="xylose_isom_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51415">
        <property type="entry name" value="XYLOSE_ISOMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 9 10" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 9 10" id="KW-0413">Isomerase</keyword>
    <keyword evidence="9" id="KW-0460">Magnesium</keyword>
    <keyword evidence="5 9 10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 9 10" id="KW-0859">Xylose metabolism</keyword>
    <feature type="domain" description="AP_endonuc_2" evidence="12">
        <location>
            <begin position="126"/>
            <end position="303"/>
        </location>
    </feature>
    <feature type="active site" evidence="9">
        <location>
            <position position="103"/>
        </location>
    </feature>
    <feature type="active site" evidence="9">
        <location>
            <position position="106"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="234"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="270"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="273"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="298"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="309"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="311"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="341"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>1</label>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005765"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011958"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00018232"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022629"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00033659"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00455"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU000609"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU000610"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF01261"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="CTQ76930.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="439" mass="48998" checksum="FF09373B0168E3D7" modified="2015-12-09" version="1">MSTGFFGDLQPIQFAGPESRDPLTYRHYNKDEVVFGKRMEDHLRLAVCYWHNFCWPGSDPFGGETFNRTWMAAGGDPMEQAKLKANVAFEMFQILGMPFFTFHDRDIAPEGKTLAESNANVNAIADIFEKKMAETGVKLLWGTANMFSNRRYMSGAATNPNPDVFAYAAAQVKNAMDVTQRLGGANYVLWGGREGYETLLNTNIKQELDQLGRFLNMVVEYKHKIGFKGAILIEPKPQEPSKHQYDYDVATVYGFLKAYGLENEVKMNIEQGHAILAGHSFEHELHMARSLGIFGSVDMNRNDYQCGWDTDHFGMNVPELALAYYEILMAGGFTTGGTNFDAKLRRQSLDPVDLVQAHVGSADAIARGLKAAAAMIEDGRVKGFVEDRYAGWKKPENQEVLKGGSSLEALAERVHAQDLEPQPVSGKQEYLESLANLFV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASG9</accession>
    <name>A0A0M7ASG9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Acetyltransferase (GNAT) family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04971</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000037">
        <property type="protein sequence ID" value="CTQ77597.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674108.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000037.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04971"/>
    <dbReference type="EnsemblBacteria" id="CTQ77597">
        <property type="protein sequence ID" value="CTQ77597"/>
        <property type="gene ID" value="LAX5112_04971"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="3"/>
            <end position="193"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77597.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="195" mass="22055" checksum="3D24F99029B36085" modified="2015-12-09" version="1">MAIKIRRLTGEELKKTLGALAQLRISVFRAWPYLYEGTLAYEENYLGRYAETEGAVIVGAYDGDRLVGAATGEPLGGEYDAFQAPLRAKGFDPGKLFYMAESVLDPAYRGRGVGHLFFDEREAHAKELGFGEAVFCAVVRPDDHPMKPADYRPLDPFWTKRGYAKLEGVMVTFPWQDVGESEETDKLMQVWYRHF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASJ7</accession>
    <name>A0A0M7ASJ7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04921</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000035">
        <property type="protein sequence ID" value="CTQ77481.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674064.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000035.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77481">
        <property type="protein sequence ID" value="CTQ77481"/>
        <property type="gene ID" value="LAX5112_04921"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="194"/>
            <end position="218"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77481.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="222" mass="24275" checksum="46F49EA56175A092" modified="2015-12-09" version="1">MNQISAFKGKIDRLDASSVAGWVKSEETPSEPLELEVFYGDTHLGDVTANESRQDLSRAGIGDCAFTFKLPALEDFDPEDLMVVVKGTDIPLKRSWAPNLSNTREVRGELAELSETVKLTRKVLLAASSRNERALIGMADTVEKVTPRQLNETLNTLSYQIMQTDTAIKAIKSATDETNEKLSSLGRLVRSNAFYAKVNTVLFIGILVLVLATATGVLDLAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ATI6</accession>
    <name>A0A0M7ATI6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04962</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000037">
        <property type="protein sequence ID" value="CTQ77580.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77580">
        <property type="protein sequence ID" value="CTQ77580"/>
        <property type="gene ID" value="LAX5112_04962"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="68"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="156"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="68"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="166"/>
            <end position="186"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77580.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="194" mass="21531" checksum="00CB62EFFB57FBEE" modified="2015-12-09" version="1">MIAKALAKRAFNRKVQNASICQLSFSTFLFDGTLRISKFSALQLEELRSHPGLYAMIFVRALRPRTFHRPHGGREDQDPQPRPRRHLDPSGHRGKPVPGPSVPPQRERRGKGPPRPALVSMPWKRLPEQDGQTQLQPVCPGYSFMVAIGIGTPVAKNALPPKQERISGKGSSTQTLSATNASGENWKPWAGWSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ATJ8</accession>
    <name>A0A0M7ATJ8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Adenylate cyclase 1</fullName>
            <ecNumber evidence="4">4.6.1.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">cyaA_17</name>
        <name evidence="4" type="ORF">LAX5112_04803</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="4.6.1.1" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000031">
        <property type="protein sequence ID" value="CTQ77103.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04803"/>
    <dbReference type="EnsemblBacteria" id="CTQ77103">
        <property type="protein sequence ID" value="CTQ77103"/>
        <property type="gene ID" value="LAX5112_04803"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004016">
        <property type="term" value="F:adenylate cyclase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009190">
        <property type="term" value="P:cyclic nucleotide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035556">
        <property type="term" value="P:intracellular signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07302">
        <property type="entry name" value="CHD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00207">
        <property type="entry name" value="fer2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1230">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036010">
        <property type="entry name" value="2Fe-2S_ferredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001041">
        <property type="entry name" value="2Fe-2S_ferredoxin-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001054">
        <property type="entry name" value="A/G_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012675">
        <property type="entry name" value="Beta-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034804">
        <property type="entry name" value="SQR/QFR_C/D"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00111">
        <property type="entry name" value="Fer2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00211">
        <property type="entry name" value="Guanylate_cyc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00044">
        <property type="entry name" value="CYCc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54292">
        <property type="entry name" value="SSF54292"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81343">
        <property type="entry name" value="SSF81343"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51085">
        <property type="entry name" value="2FE2S_FER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50125">
        <property type="entry name" value="GUANYLATE_CYCLASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0456">Lyase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="37"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="69"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="113"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="153"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="186"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="235"/>
            <end position="256"/>
        </location>
    </feature>
    <feature type="domain" description="2Fe-2S ferredoxin-type" evidence="3">
        <location>
            <begin position="261"/>
            <end position="356"/>
        </location>
    </feature>
    <feature type="domain" description="Guanylate cyclase" evidence="2">
        <location>
            <begin position="379"/>
            <end position="515"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ77103.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="579" mass="63717" checksum="2BAAEF9E72E8B9ED" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AVQ3</accession>
    <name>A0A0M7AVQ3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Alcohol dehydrogenase [acceptor]</fullName>
            <ecNumber evidence="6">1.1.99.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">alkJ_4</name>
        <name evidence="6" type="ORF">LAX5112_05003</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the GMC oxidoreductase family.</text>
    </comment>
    <dbReference type="EC" id="1.1.99.-" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000039">
        <property type="protein sequence ID" value="CTQ77664.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674126.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000039.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_05003"/>
    <dbReference type="EnsemblBacteria" id="CTQ77664">
        <property type="protein sequence ID" value="CTQ77664"/>
        <property type="gene ID" value="LAX5112_05003"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016614">
        <property type="term" value="F:oxidoreductase activity, acting on CH-OH group of donors"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012132">
        <property type="entry name" value="GMC_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000172">
        <property type="entry name" value="GMC_OxRdtase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007867">
        <property type="entry name" value="GMC_OxRtase_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11552">
        <property type="entry name" value="PTHR11552"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05199">
        <property type="entry name" value="GMC_oxred_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00732">
        <property type="entry name" value="GMC_oxred_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000137">
        <property type="entry name" value="Alcohol_oxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00623">
        <property type="entry name" value="GMC_OXRED_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00624">
        <property type="entry name" value="GMC_OXRED_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3" id="KW-0274">FAD</keyword>
    <keyword evidence="3" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GMC_OxRdtase_N" evidence="4">
        <location>
            <begin position="80"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="domain" description="GMC_OxRdtase_N" evidence="5">
        <location>
            <begin position="253"/>
            <end position="267"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="82"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010790"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR000137-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU003968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS00623"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS00624"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ77664.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="536" mass="58649" checksum="F32222C19887F842" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZM53</accession>
    <name>A0A0M6ZM53_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00085</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63839.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040450629.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ63839">
        <property type="protein sequence ID" value="CTQ63839"/>
        <property type="gene ID" value="LAX5112_00085"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ63839.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="171" mass="18800" checksum="5ACDE8E160251B31" modified="2015-12-09" version="1">MLTRPASTFTELGTKVIEQGLADPKLSEFYEAIQSASHQATPGTLKPYINYLSLCSDKVSDLAPPPIFYVGRESSQRLLFGDQWATPEAVGGPASGLRTPDAELEKASADAYKAALNIRPYYGYARTLISLDGETYEIAFERLIVGIRPAPAASYQICAYYGVIQDLQRRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZNM9</accession>
    <name>A0A0M6ZNM9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 7">S-formylglutathione hydrolase</fullName>
            <ecNumber evidence="3 7">3.1.2.12</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">fghA</name>
        <name evidence="8" type="ORF">LAX5112_00062</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Serine hydrolase involved in the detoxification of formaldehyde.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>H2O + S-formylglutathione = formate + glutathione + H(+)</text>
            <dbReference type="Rhea" id="RHEA:14961"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15740"/>
            <dbReference type="ChEBI" id="CHEBI:57688"/>
            <dbReference type="ChEBI" id="CHEBI:57925"/>
            <dbReference type="EC" id="3.1.2.12"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the esterase D family.</text>
    </comment>
    <dbReference type="EC" id="3.1.2.12" evidence="3 7"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63776.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670117.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00062"/>
    <dbReference type="EnsemblBacteria" id="CTQ63776">
        <property type="protein sequence ID" value="CTQ63776"/>
        <property type="gene ID" value="LAX5112_00062"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052689">
        <property type="term" value="F:carboxylic ester hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018738">
        <property type="term" value="F:S-formylglutathione hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046294">
        <property type="term" value="P:formaldehyde catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000801">
        <property type="entry name" value="Esterase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014186">
        <property type="entry name" value="S-formylglutathione_hydrol"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10061">
        <property type="entry name" value="PTHR10061"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00756">
        <property type="entry name" value="Esterase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02821">
        <property type="entry name" value="fghA_ester_D"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 7 8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0719">Serine esterase</keyword>
    <feature type="active site" description="Charge relay system" evidence="6">
        <location>
            <position position="145"/>
        </location>
    </feature>
    <feature type="active site" description="Charge relay system" evidence="6">
        <location>
            <position position="221"/>
        </location>
    </feature>
    <feature type="active site" description="Charge relay system" evidence="6">
        <location>
            <position position="253"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000080"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005622"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022487"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR614186-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU363068"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ63776.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="274" mass="29920" checksum="FB452E261CF7C9C2" modified="2015-12-09" version="1">MKTISENKCFGGVQGVYSHESAATGVEMTFAVYIPPQAKNGPVPCLWYLSGLTCTHENAMTKAGLQAHAAEFGLAIVFPDTSPRGEGVANDEAYDLGQGAGFYVNATQDPWVPHFQMETYTATELRDLVQAQFPVSIHHGITGHSMGGHGALTLAMKYPSQYRSLSAFSPIANPSQSDWGRKQLGAYLGGDESLWTSHDAVCLLKEKGWVEDILVDQGADDQFYDLLKPEALAAALAETKTAHSFRLQPGYDHSYYFVSTFARDHVAWHAARLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPI2</accession>
    <name>A0A0M6ZPI2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Flagellar transcriptional regulator FtcR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">ftcR</name>
        <name evidence="6" type="ORF">LAX5112_00193</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64141.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670196.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00193"/>
    <dbReference type="EnsemblBacteria" id="CTQ64141">
        <property type="protein sequence ID" value="CTQ64141"/>
        <property type="gene ID" value="LAX5112_00193"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00383">
        <property type="entry name" value="trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001867">
        <property type="entry name" value="OmpR/PhoB-type_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016032">
        <property type="entry name" value="Sig_transdc_resp-reg_C-effctor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039420">
        <property type="entry name" value="WalR-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48111">
        <property type="entry name" value="PTHR48111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00486">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00862">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46894">
        <property type="entry name" value="SSF46894"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51755">
        <property type="entry name" value="OMPR_PHOB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0966">Cell projection</keyword>
    <keyword evidence="6" id="KW-0969">Cilium</keyword>
    <keyword evidence="1 3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-0282">Flagellum</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="4">
        <location>
            <begin position="1"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="domain" description="OmpR/PhoB-type" evidence="5">
        <location>
            <begin position="124"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="OmpR/PhoB-type" evidence="3">
        <location>
            <begin position="124"/>
            <end position="223"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ64141.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="261" mass="29124" checksum="8BD855C2B88594A7" modified="2015-12-09" version="1">MFIIVDDREIVTSGYAAAFEREGYASLELLPGELPDWLETGCSQDLASVDAILIGECTERAGFITQIRSRCPEAQIVALEDTASLQGTLDLFSAGFDEVLKKPVHVREIIARFGVFRRRAMARDTSSEAGAIEVFFDGRDPTVGGQVMELPRRERRILEYLVKNKGRRVTKTQIFNAVYGVMNEGVDECVVESHISKLRKKLKRQLGFDAIESTRYIGYMLKDTASPKRLVSETPLPKSARQPVRAAVNKRELVLAVENVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPP0</accession>
    <name>A0A0M6ZPP0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Gamma-glutamylputrescine synthetase PuuA</fullName>
            <ecNumber evidence="7">6.3.1.11</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">puuA_2</name>
        <name evidence="7" type="ORF">LAX5112_00385</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Catalyzes the ATP-dependent biosynthesis of glutamine from glutamate and ammonia.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the glutamine synthetase family.</text>
    </comment>
    <dbReference type="EC" id="6.3.1.11" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64739.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670363.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00385"/>
    <dbReference type="EnsemblBacteria" id="CTQ64739">
        <property type="protein sequence ID" value="CTQ64739"/>
        <property type="gene ID" value="LAX5112_00385"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004356">
        <property type="term" value="F:glutamate-ammonia ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034024">
        <property type="term" value="F:glutamate-putrescine ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006542">
        <property type="term" value="P:glutamine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009399">
        <property type="term" value="P:nitrogen fixation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036651">
        <property type="entry name" value="Gln_synt_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014746">
        <property type="entry name" value="Gln_synth/guanido_kin_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008146">
        <property type="entry name" value="Gln_synth_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027303">
        <property type="entry name" value="Gln_synth_gly_rich_site"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00120">
        <property type="entry name" value="Gln-synt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01230">
        <property type="entry name" value="Gln-synt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54368">
        <property type="entry name" value="SSF54368"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55931">
        <property type="entry name" value="SSF55931"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00181">
        <property type="entry name" value="GLNA_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0436">Ligase</keyword>
    <keyword evidence="3" id="KW-0535">Nitrogen fixation</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Gln-synt_C" evidence="6">
        <location>
            <begin position="131"/>
            <end position="387"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="166"/>
            <end position="186"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00003117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023231"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU000384"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM01230"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ64739.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="468" mass="52793" checksum="A5802176DA42173A" modified="2015-12-09" version="1">MTNTPPANSTPHKEESLRGVSDVDAARDWLNHRNIQDIECIVPDLAGVARGKMMPTEKFFSGPVMTMPASIFAQTISGDYPEDDERFQHNPTDGDLYFRADYSTLTTVPWESDPTAQLIHDAYTREGAPVETAPRNVLRHILKLYDDKGWQPVVAPEIEFYLVRPNTDPDYPLEPPTGRSGRPEVGRQSYSISALNEFDDLIDDIYDLSEQQGLEIDTMIHEEGAAQMEINLRHGNPLELADQVFLFKRTIREAALRHEMYATFMSKPMSNQPGSAMHIHQSVIDKETGQNIFAGENGMETEAFLSFIAGHQVYLPQVTPIMAPFVNSYRRFSKTSTSPVNVYWGYDNRTVGLRVPYSSPDARRLENRIPGSDANPYLAIAASLACGYLGIVKGLKPDAPRMDDCTELTKSLPRGLPEALTLFENSEDMIEVFGEKFVATYRAIKYEEFETFMSVISPWEREYLLLNV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQ32</accession>
    <name>A0A0M6ZQ32_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative FAD-binding dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00429</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64865.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00429"/>
    <dbReference type="EnsemblBacteria" id="CTQ64865">
        <property type="protein sequence ID" value="CTQ64865"/>
        <property type="gene ID" value="LAX5112_00429"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039650">
        <property type="entry name" value="HdrA-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43498">
        <property type="entry name" value="PTHR43498"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="77"/>
            <end position="100"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64865.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="453" mass="49026" checksum="1F313BF2B4A459F4" modified="2015-12-09" version="1">MKTITEPAREVDVVHETDVLVVGSGPGGLSAALGAARAGVNVTLVERFGCLGGNITAVGVEGFAWYRHEKTVDTEGVGREFESRAREAGASTPEPQSDSDAIDAEGFKLVADNLVEEAGIRPMMHRAFAAPIMDGNEIKGIITESKAGREAILAKRVIDATGDADIAYRAGAETHKTPVEEMQAASVMFSMNGVDKKKFMEAVKADPHTYKDWESGEWTVETTGKEDKMFSPFLKKPFKQALEAGIIPAHLQTISGTWGAVYDSGDLTYLNLVHLPECDGTDPDSMTRNEIEGRRQAMLAVEALKRYQPGCEDAKLRNFGMTIGIRDTRKILAAYDMTGHDVREQGRFDDSVGIFPEFIDGYGILILPTTGRYFQLPYRTMLPNGVKNLLVAGRATGGDNVSHAATRNMMCCTVTGQGAGVAAAISVKHGIDLDAMDISLLQTELKRQGVRLH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQ38</accession>
    <name>A0A0M6ZQ38_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Nitrate reductase</fullName>
            <ecNumber evidence="11">1.7.99.4</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">nasA</name>
        <name evidence="11" type="ORF">LAX5112_00433</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mo-bis(molybdopterin guanine dinucleotide)</name>
            <dbReference type="ChEBI" id="CHEBI:60539"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.</text>
    </comment>
    <dbReference type="EC" id="1.7.99.4" evidence="11"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64879.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670395.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00433"/>
    <dbReference type="EnsemblBacteria" id="CTQ64879">
        <property type="protein sequence ID" value="CTQ64879"/>
        <property type="gene ID" value="LAX5112_00433"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043546">
        <property type="term" value="F:molybdopterin cofactor binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008940">
        <property type="term" value="F:nitrate reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042128">
        <property type="term" value="P:nitrate assimilation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd02791">
        <property type="entry name" value="MopB_CT_Nitrate-R-NapA-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.1100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009010">
        <property type="entry name" value="Asp_de-COase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007419">
        <property type="entry name" value="BFD-like_2Fe2S-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041854">
        <property type="entry name" value="BFD-like_2Fe2S-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041957">
        <property type="entry name" value="CT_Nitrate-R-NapA-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006657">
        <property type="entry name" value="MoPterin_dinucl-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006656">
        <property type="entry name" value="Mopterin_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006963">
        <property type="entry name" value="Mopterin_OxRdtase_4Fe-4S_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027467">
        <property type="entry name" value="MopterinOxRdtase_cofactor_BS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04324">
        <property type="entry name" value="Fer2_BFD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04879">
        <property type="entry name" value="Molybdop_Fe4S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00384">
        <property type="entry name" value="Molybdopterin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01568">
        <property type="entry name" value="Molydop_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00926">
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    </dbReference>
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    <keyword evidence="4" id="KW-0500">Molybdenum</keyword>
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    <feature type="domain" description="4Fe-4S Mo/W bis-MGD-type" evidence="10">
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            <end position="63"/>
        </location>
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        <location>
            <position position="14"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
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    <feature type="binding site" evidence="9">
        <location>
            <position position="17"/>
        </location>
        <ligand>
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            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
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    <feature type="binding site" evidence="9">
        <location>
            <position position="21"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
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    <feature type="binding site" evidence="9">
        <location>
            <position position="49"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
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        <source>
            <dbReference type="ARBA" id="ARBA00001942"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008747"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022505"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023063"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51669"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ64879.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="896" mass="96369" checksum="0FCA649E46C5E052" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQG1</accession>
    <name>A0A0M6ZQG1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Nickel uptake substrate-specific transmembrane region</fullName>
        </submittedName>
    </protein>
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        <name evidence="2" type="ORF">LAX5112_00464</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
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        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
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            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
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        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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    </dbReference>
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    </dbReference>
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        <property type="project" value="UniProtKB-KW"/>
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    </dbReference>
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    </dbReference>
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    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005808896" evidence="1">
        <location>
            <begin position="25"/>
            <end position="265"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64968.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="265" mass="29087" checksum="1083B5C351162A52" modified="2015-12-09" version="1">MTLRKIGLGALLATAILNPFAAQAHFVLAYTPEVNLEKAGDTPVKLIFWHPFENGHVMDMEEPLEFYAVHRGEKYDLKNTLKPITFSGTENEAAAFDATLPVKRSGDYVLVVEPAPYYEESEDIYIQQLTKAYVNRNEIPTDWMEPQGLATEILPLNRPTNIVAGSTFTGRVLAEGKPVAGAEIEIEYMAAEPDMDANKPQEAQASTMPGGTIVAISDENGYFTFGIPKAGFWGFAALGSGAVKEHEGKELSQDAVIWVRAYDVQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQH3</accession>
    <name>A0A0M6ZQH3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">H(+)/Cl(-) exchange transporter ClcA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">clcA_1</name>
        <name evidence="6" type="ORF">LAX5112_00332</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
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            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
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            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
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            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
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        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="gene ID" value="LAX5112_00332"/>
    </dbReference>
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    </dbReference>
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        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="project" value="InterPro"/>
    </dbReference>
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    </dbReference>
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        <property type="entry name" value="Cl-channel_volt-gated"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00654">
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00762">
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    </dbReference>
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        <property type="entry name" value="SSF81340"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
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    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
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    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="20"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
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        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
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            <end position="123"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
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            <end position="177"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
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            <end position="206"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
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            <end position="250"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
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            <end position="282"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="302"/>
            <end position="322"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
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            <end position="347"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
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            <end position="380"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="392"/>
            <end position="413"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ64597.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="450" mass="46961" checksum="3222B3880502E342" modified="2015-12-09" version="1">MKAPTLLKTSDTPYFLKAALVGILVGGLATGFHSGVEILISIYANLRASIGSSMLTYVVSAVVSAICVTGAFFLVSRFAPEAAGSGIQEIEGAMEDKRPLHWARVLVVKFFGGLLALGSGLVLGREGPTIHMGAMTAEALSRSQGLQSADHKGLLAAGAAAGLAAAFNAPLAAILFIVEETRRQFPFGYRTYMAVIIASILSAAITEQLTHIGPPLLIEVTYIPVWSFPLLGLLGVCLGFLGVFFNWALLKVMDLFHSIPKGARWIPAMMIGAATGILLVAFPDATGGGEDLVRDLVTKDYGILALLLLTLFRFGGVLFSYASGVPGGIFAPMLSIATCAGLAFGAITTDIIPVGDADFKAACAIAAMGGFFAASVRAPLVGVVLVMELTGAYALILPVLVTCTVAALTAHHLGGRPIYEQLLERTLRLAGQAPDAETDRTPVQLGTRKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRT7</accession>
    <name>A0A0M6ZRT7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Enamine/imine deaminase</fullName>
            <ecNumber evidence="1">3.5.4.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yabJ_1</name>
        <name evidence="1" type="ORF">LAX5112_00491</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.5.4.-" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65047.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670442.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ65047">
        <property type="protein sequence ID" value="CTQ65047"/>
        <property type="gene ID" value="LAX5112_00491"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06150">
        <property type="entry name" value="YjgF_YER057c_UK114_like_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035959">
        <property type="entry name" value="RutC-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006175">
        <property type="entry name" value="YjgF/YER057c/UK114"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035709">
        <property type="entry name" value="YoaB-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47328">
        <property type="entry name" value="PTHR47328"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01042">
        <property type="entry name" value="Ribonuc_L-PSP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55298">
        <property type="entry name" value="SSF55298"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ65047.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="116" mass="12458" checksum="E24063F040F08F15" modified="2015-12-09" version="1">MSDIKRLQVGPRMSQAVIHGSLVWLAGQVGNPGESVADQTRVILEKIDQLLADAGSGKSRILQATIWLASMDDFAEMNEVWDAWVDPANPPARACGESKLATPEYTVEIIVVAAVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRY9</accession>
    <name>A0A0M6ZRY9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Energy-coupling factor transporter probable substrate-capture protein NikMN</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">nikMN</name>
        <name evidence="8" type="ORF">LAX5112_00463</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64966.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670419.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00463"/>
    <dbReference type="EnsemblBacteria" id="CTQ64966">
        <property type="protein sequence ID" value="CTQ64966"/>
        <property type="gene ID" value="LAX5112_00463"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000041">
        <property type="term" value="P:transition metal ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002751">
        <property type="entry name" value="CbiM/NikMN"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01891">
        <property type="entry name" value="CbiM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="12"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="35"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="63"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="91"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="130"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="166"/>
            <end position="188"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ64966.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="208" mass="21181" checksum="2409B0060AAF549B" modified="2015-12-09" version="1">MHIVDGALSNEIVIAAAVLAVGGIALGLRKLPMERIPVAGVLSATFFVASLIHVPIGPSSVHLILSGLAGLVLGWAAFPALFVGLLLQSVFFGFGGVTVLGVNTLNIALPAVAVFYLCRYGIASKSDVAAAIWGGFGGALAIALTAVMVAVSLALSGEEFIPAAKLVLVTHVPVIVIEGLLTGFAVYLTRKVKPELFAEISSPAGGVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRZ9</accession>
    <name>A0A0M6ZRZ9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">NMT1/THI5 like protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_00676</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65559.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670825.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00676"/>
    <dbReference type="EnsemblBacteria" id="CTQ65559">
        <property type="protein sequence ID" value="CTQ65559"/>
        <property type="gene ID" value="LAX5112_00676"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009228">
        <property type="term" value="P:thiamine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027939">
        <property type="entry name" value="NMT1/THI5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015168">
        <property type="entry name" value="SsuA/THI5"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31528">
        <property type="entry name" value="PTHR31528"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09084">
        <property type="entry name" value="NMT1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809046" evidence="1">
        <location>
            <begin position="23"/>
            <end position="336"/>
        </location>
    </feature>
    <feature type="domain" description="NMT1" evidence="2">
        <location>
            <begin position="36"/>
            <end position="235"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF09084"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ65559.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="336" mass="36633" checksum="126581C6589551D3" modified="2015-12-09" version="1">MDLSRKIGLATLAVMASTSAHALEKVTFGTNWVAQAEHGGYYQAVADGTYEACGIEVEIKPGGPQANNRILLPVGKIDFLMGGNMLQAFSAVEQGIPTAVVAAHFQKEPQILMTHPDQGLDTWESLKDINLLIGKGGLNSYFQWMKAEFGFKDEQVRPYTYNSAPFLADKKLGQQGYITSEPYAIETEGGFEPNIFLIADYGYDTYSTTVETRLDLIETKPEVVKCFVDGSAIGWVNFLYGDNSKALELIKKDNPGMTDGQLAFSIDKLKSYGIVDSGDALTMGIGAMTDERNKSFFEKMVAAGVVNGDVDYTKSYTLQFVNQGVGVDLKKELAGN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZS46</accession>
    <name>A0A0M6ZS46_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00503</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65082.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670454.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ65082">
        <property type="protein sequence ID" value="CTQ65082"/>
        <property type="gene ID" value="LAX5112_00503"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="36"/>
            <end position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65082.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="68" mass="7522" checksum="4A7DC90468161F90" modified="2015-12-09" version="1">MAQRHQKLGTAEATRYLKAVKEAGFKRGRVIKHPDGRIELVGEDQPSTPASAPLSPFEQWEANHADTP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZS76</accession>
    <name>A0A0M6ZS76_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Colicin uptake protein TolQ</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">LAX5112_00693</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 6">Membrane</location>
            <topology evidence="1 6">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the exbB/tolQ family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65605.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00693"/>
    <dbReference type="EnsemblBacteria" id="CTQ65605">
        <property type="protein sequence ID" value="CTQ65605"/>
        <property type="gene ID" value="LAX5112_00693"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015031">
        <property type="term" value="P:protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002898">
        <property type="entry name" value="MotA_ExbB_proton_chnl"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01618">
        <property type="entry name" value="MotA_ExbB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0653">Protein transport</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="45"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="148"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="186"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="domain" description="MotA_ExbB" evidence="8">
        <location>
            <begin position="106"/>
            <end position="224"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU004057"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF01618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ65605.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="255" mass="26343" checksum="CE2E48815BC81E36" modified="2015-12-09" version="1">MASSASSIDGLLLKMLSWAHSRKVEGMISELTHQIASFLQLGGPVVTVIAGLSVIALALILVKAFEFLVLGVGSNRRAKAGVKLWLSHRPGDALAVIGAPKSAADKAVLTACKLLESRNGKSEIEERVGVQAAGDLHHFAKGVRALEAIAQVAPLIGLFGTVLGMIEAFQALQSAGSNVDPSALAGGIWVALMTTAAGLAVAMPVSLVVTWLEGRLEAERVAIETLTSALLLPSLDHGVEEVDGMPAGAALSYAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZT46</accession>
    <name>A0A0M6ZT46_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Microcystinase C</fullName>
            <shortName evidence="1">MlrC</shortName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_00649</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Involved in peptidolytic degradation of cyclic heptapeptide hepatotoxin microcystin (MC).</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="1">Binds 1 zinc ion per subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase M81 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65487.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670601.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00649"/>
    <dbReference type="EnsemblBacteria" id="CTQ65487">
        <property type="protein sequence ID" value="CTQ65487"/>
        <property type="gene ID" value="LAX5112_00649"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008237">
        <property type="term" value="F:metallopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009197">
        <property type="entry name" value="MlrC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010799">
        <property type="entry name" value="MlrC_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015995">
        <property type="entry name" value="MlrC_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07364">
        <property type="entry name" value="DUF1485"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07171">
        <property type="entry name" value="MlrC_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF012702">
        <property type="entry name" value="UCP012702"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="1" id="KW-0482">Metalloprotease</keyword>
    <keyword evidence="1" id="KW-0645">Protease</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF1485" evidence="3">
        <location>
            <begin position="2"/>
            <end position="287"/>
        </location>
    </feature>
    <feature type="domain" description="MlrC_C" evidence="2">
        <location>
            <begin position="297"/>
            <end position="470"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRNR" id="PIRNR012702"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF07364"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ65487.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="488" mass="52062" checksum="EB0558AE14D1CD1A" modified="2015-12-09" version="1">MRIFCASLATETNTFSPLRTDFSDFKQSFYAAPGAHPETPTLCSGVFPALRRASQDLDFDLIEGTATWAEPGGLLNAATWVYLRDEILEQVREALPLDAVVLGLHGAMIADGCTDCEGVLLEAVRGIVGPETIIGVTFDPHSHLSQKRVDNADIITVFKEFPHTDFAETGDACVALVLRALNGEIKPVVSAYDVRMIDILPTSQAPMRGFVDRMKALEEDGAVLSVSAIHGFMAGDSPDLGAKIVVVTDNDPKKGNEIAKRLGEELFSFRGQTKPQFLTAADALSLAAKADCGPVVVADVWDNPGGGVAGDSTLMLREAIAQNLQSAAFGTIWDPMAVRLCHAAGEGGALNLRFGGKTSSTAGDPVDASVTVLKNQRDAVQSFGTSIVPLGDCSVIRFGGIDVVLNSNRSQAFSPDLFTNLGIDITAKKVLVVKSTNHFYGAFSRIAAEVLYASVDGPYPNDPKTTPYTRLTRPLWPIVSNPFEMALA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTZ2</accession>
    <name>A0A0M6ZTZ2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Arabinose 5-phosphate isomerase KdsD</fullName>
            <ecNumber evidence="4">5.3.1.13</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">kdsD_1</name>
        <name evidence="4" type="ORF">LAX5112_00745</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="5.3.1.13" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65757.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670672.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00745"/>
    <dbReference type="EnsemblBacteria" id="CTQ65757">
        <property type="protein sequence ID" value="CTQ65757"/>
        <property type="gene ID" value="LAX5112_00745"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019146">
        <property type="term" value="F:arabinose-5-phosphate isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd04623">
        <property type="entry name" value="CBS_pair_bac_euk"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.580.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000644">
        <property type="entry name" value="CBS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046342">
        <property type="entry name" value="CBS_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044725">
        <property type="entry name" value="CBSX3_CBS_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00571">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00116">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54631">
        <property type="entry name" value="SSF54631"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51371">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0129">CBS domain</keyword>
    <keyword evidence="4" id="KW-0413">Isomerase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CBS" evidence="3">
        <location>
            <begin position="39"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="domain" description="CBS" evidence="3">
        <location>
            <begin position="107"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00703"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51371"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ65757.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="173" mass="19149" checksum="BD8202642B00573F" modified="2015-12-09" version="1">MPSSYQAPSRKDKIQEKTHSQTRVTNASAETATVGKILVSKGKDVFSLRPQNTLHEAVVQLKEKRIGALIVKDAAGKLQGILSERDIVRRLAETPGQTLSQKVEDIMTRDVKTCSPEDQLIAVLQTMTKGKFRHMPVVNGDIVVGIVTIGDVVNYRLQELEYESLQLKQLIVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTZ3</accession>
    <name>A0A0M6ZTZ3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">NTP_transf_9 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00909</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66208.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ66208">
        <property type="protein sequence ID" value="CTQ66208"/>
        <property type="gene ID" value="LAX5112_00909"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.170.150.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007361">
        <property type="entry name" value="DUF427"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038694">
        <property type="entry name" value="DUF427_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04248">
        <property type="entry name" value="NTP_transf_9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NTP_transf_9" evidence="1">
        <location>
            <begin position="35"/>
            <end position="124"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04248"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66208.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="132" mass="14742" checksum="25D806074DB3B5A6" modified="2015-12-09" version="1">MTVDPVLQSPAFVDAIRNPEDPNHLMVIKPVMRKIRVFAGETLLADTTNAIRVMEVGRGVYDPVIYVPEISLQSPFSELSKSTHCPIKGDASYVAIGGDEIGWVYKTPLEMSLQLKNHYAFWPDKVRIVEGN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUZ1</accession>
    <name>A0A0M6ZUZ1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">ATP-dependent RNA helicase HrpB</fullName>
            <ecNumber evidence="4">3.6.4.13</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">hrpB</name>
        <name evidence="4" type="ORF">LAX5112_00573</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.6.4.13" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65283.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00573"/>
    <dbReference type="EnsemblBacteria" id="CTQ65283">
        <property type="protein sequence ID" value="CTQ65283"/>
        <property type="gene ID" value="LAX5112_00573"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003724">
        <property type="term" value="F:RNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007502">
        <property type="entry name" value="Helicase-assoc_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010225">
        <property type="entry name" value="HrpB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013689">
        <property type="entry name" value="RNA_helicase_ATP-dep_HrpB_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04408">
        <property type="entry name" value="HA2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08482">
        <property type="entry name" value="HrpB_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005496">
        <property type="entry name" value="ATP_hel_hrpB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00847">
        <property type="entry name" value="HA2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01970">
        <property type="entry name" value="DEAH_box_HrpB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0347">Helicase</keyword>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="2">
        <location>
            <begin position="23"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase C-terminal" evidence="3">
        <location>
            <begin position="205"/>
            <end position="378"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="798"/>
            <end position="825"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ65283.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="825" mass="88854" checksum="C8CAEDDCEACC9AF5" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUZ8</accession>
    <name>A0A0M6ZUZ8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00879</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66127.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670772.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00879"/>
    <dbReference type="EnsemblBacteria" id="CTQ66127">
        <property type="protein sequence ID" value="CTQ66127"/>
        <property type="gene ID" value="LAX5112_00879"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045471">
        <property type="entry name" value="DUF6494"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20104">
        <property type="entry name" value="DUF6494"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ66127.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="62" mass="6780" checksum="B3D1EA0363F4BF81" modified="2015-12-09" version="1">MNDDFNMSMRKFLKQVGVTSQQAIENAVREAGASEGKSFNVKAVIVIEELGLEHVVEGEIKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZV18</accession>
    <name>A0A0M6ZV18_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">Phenylalanine--tRNA ligase alpha subunit</fullName>
            <ecNumber evidence="13">6.1.1.20</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="13">Phenylalanyl-tRNA synthetase alpha subunit</fullName>
            <shortName evidence="13">PheRS</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="13 15" type="primary">pheS</name>
        <name evidence="15" type="ORF">LAX5112_00601</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 13">
            <text>ATP + L-phenylalanine + tRNA(Phe) = AMP + diphosphate + H(+) + L-phenylalanyl-tRNA(Phe)</text>
            <dbReference type="Rhea" id="RHEA:19413"/>
            <dbReference type="Rhea" id="RHEA-COMP:9668"/>
            <dbReference type="Rhea" id="RHEA-COMP:9699"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:58095"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78531"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.20"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="13">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="13">Binds 2 magnesium ions per tetramer.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4 13">Tetramer of two alpha and two beta subunits.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 13">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 13">Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.20" evidence="13"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65364.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008189980.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00601"/>
    <dbReference type="EnsemblBacteria" id="CTQ65364">
        <property type="protein sequence ID" value="CTQ65364"/>
        <property type="gene ID" value="LAX5112_00601"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004826">
        <property type="term" value="F:phenylalanine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006432">
        <property type="term" value="P:phenylalanyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.930.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00281">
        <property type="entry name" value="Phe_tRNA_synth_alpha1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006195">
        <property type="entry name" value="aa-tRNA-synth_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045864">
        <property type="entry name" value="aa-tRNA-synth_II/BPL/LPL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004529">
        <property type="entry name" value="Phe-tRNA-synth_IIc_asu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004530">
        <property type="entry name" value="Phe-tRNA-synth_IIc_mito"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004188">
        <property type="entry name" value="Phe-tRNA_ligase_II_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022911">
        <property type="entry name" value="Phe_tRNA_ligase_alpha1_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002319">
        <property type="entry name" value="Phenylalanyl-tRNA_Synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010978">
        <property type="entry name" value="tRNA-bd_arm"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11538:SF41">
        <property type="entry name" value="PTHR11538:SF41"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02912">
        <property type="entry name" value="Phe_tRNA-synt_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01409">
        <property type="entry name" value="tRNA-synt_2d"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46589">
        <property type="entry name" value="SSF46589"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55681">
        <property type="entry name" value="SSF55681"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00468">
        <property type="entry name" value="pheS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50862">
        <property type="entry name" value="AA_TRNA_LIGASE_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="12 13" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="9 13" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 13" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 13 15" id="KW-0436">Ligase</keyword>
    <keyword evidence="10 13" id="KW-0460">Magnesium</keyword>
    <keyword evidence="7 13" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8 13" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11 13" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AA_TRNA_LIGASE_II" evidence="14">
        <location>
            <begin position="121"/>
            <end position="348"/>
        </location>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="260"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000395"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010207"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011209"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00281"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS50862"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="CTQ65364.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="360" mass="40254" checksum="7DE018D9FC9C22DC" modified="2015-12-09" version="1">MSNLDTLESELLAAIEKAGSESALEEVRVAALGKKGSISEQMKTLGKMTPEERQVMGPALNGLKAKITDAVSARKDVLAEAALEARLASETVDVTLPMRPSPTDTGRIHPVSQVIDELTAIFADMGFSIAEGPDIETDELNFTALNFPEGHPAREMHDTFFFNEKEDGERLLLRTHTSPVQIRTMRTEEPPIRVIIPGRTYRCDSDQTHTPMFHQVEGLVIDKESHLGHLKWILEEFCKAFFEVDDIKMRLRPSFFPFTEPSMEIDIQCDRSGGEVKIGQGDDWLEILGCGMVHPNVIRNCGLDPDVYQGFAWGMGIDRIAMLKYGMPDLRAFFDADVRWIQHYGFRPLDLPTLFGGLSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZV31</accession>
    <name>A0A0M6ZV31_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DNA-binding transcriptional regulator HexR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00890</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66157.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670780.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00890"/>
    <dbReference type="EnsemblBacteria" id="CTQ66157">
        <property type="protein sequence ID" value="CTQ66157"/>
        <property type="gene ID" value="LAX5112_00890"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0097367">
        <property type="term" value="F:carbohydrate derivative binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901135">
        <property type="term" value="P:carbohydrate derivative metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd05013">
        <property type="entry name" value="SIS_RpiR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000281">
        <property type="entry name" value="HTH_RpiR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035472">
        <property type="entry name" value="RpiR-like_SIS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001347">
        <property type="entry name" value="SIS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046348">
        <property type="entry name" value="SIS_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01418">
        <property type="entry name" value="HTH_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01380">
        <property type="entry name" value="SIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53697">
        <property type="entry name" value="SSF53697"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51071">
        <property type="entry name" value="HTH_RPIR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH rpiR-type" evidence="1">
        <location>
            <begin position="3"/>
            <end position="79"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51071"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66157.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="289" mass="31613" checksum="651342C54AFECD0F" modified="2015-12-09" version="1">MERPLLDDIRDRLDEFTATEKKAAHALMANYPVQGLGTVAEFAKAAGVSAPTILRFVARLGFPGFAEFQKKLRSELANQLNSPLARSTSLAKDTTGDPHVGQLIENIRETFDHLPKGELDGLVKLLADDRKTVHLIGGRFTDGLARYMAAHLRIVRPNVVHVAGQHGNWLDQLLGIGPKDVVLVFDIRRYQAEIIQFADAAAKQGATVALVTDSWMSPIGRIASYVLPARVAVPSPWDSSLALMAIAEVLIAGVTRENQDKAEERMRALEALRNSHDPATESRTNSPDI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZV50</accession>
    <name>A0A0M6ZV50_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Formate dehydrogenase-N subunit gamma</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">fdnI</name>
        <name evidence="11" type="ORF">LAX5112_00870</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the formate dehydrogenase gamma subunit family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66102.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670764.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00870"/>
    <dbReference type="EnsemblBacteria" id="CTQ66102">
        <property type="protein sequence ID" value="CTQ66102"/>
        <property type="gene ID" value="LAX5112_00870"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009326">
        <property type="term" value="C:formate dehydrogenase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008863">
        <property type="term" value="F:formate dehydrogenase (NAD+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022904">
        <property type="term" value="P:respiratory electron transport chain"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011577">
        <property type="entry name" value="Cyt_b561_bac/Ni-Hgenase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016174">
        <property type="entry name" value="Di-haem_cyt_TM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006471">
        <property type="entry name" value="Formate_DH_gsu"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01292">
        <property type="entry name" value="Ni_hydr_CYTB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81342">
        <property type="entry name" value="SSF81342"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01583">
        <property type="entry name" value="formate-DH-gamm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0732">Signal</keyword>
    <keyword evidence="5 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="9">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809305" evidence="9">
        <location>
            <begin position="21"/>
            <end position="404"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="125"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="173"/>
            <end position="199"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="219"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="273"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="336"/>
            <end position="355"/>
        </location>
    </feature>
    <feature type="domain" description="Ni_hydr_CYTB" evidence="10">
        <location>
            <begin position="163"/>
            <end position="362"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010747"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF01292"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ66102.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="404" mass="44188" checksum="E481E18B93406BE8" modified="2015-12-09" version="1">MNRFVLAFAVLFAFMMQAFAQDSAAPSADVDRSATGGAQTLEDILKRQRGEKVDYDFRRNATGDPDSAANMSSQLGTLGGASDPELWRALRFGSADVTVSSGGQVASVLMQDGGMRWLLFRQGPLATYGGYLLLGTLGFLVLFYLLRGRIRIDGEKTGRTITRFKAVERFGHWLLAGSFILLGITGLITLFGRMAIIPLIGHDAFAPIAQASKWIHNNVSWAFMIALVMVFVMWVVHNIPNKTDLKWIAVGGGLLKKGVHPPAKKFNFGQKMIFWSVIVLGASISASGISLLFPFEYPMFAATFNVLNSTGLPQLIGFGELPTQLAPHEEMQYAQLWHSIIAFLMMAIILAHIYIGSVGMEGAYDAMGSGEVELQWAKEHHGLWVAEVEAAEKDRQAKNAVPAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVI4</accession>
    <name>A0A0M6ZVI4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Leucine-responsive regulatory protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">lrp_3</name>
        <name evidence="5" type="ORF">LAX5112_01093</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66789.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670961.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01093"/>
    <dbReference type="EnsemblBacteria" id="CTQ66789">
        <property type="protein sequence ID" value="CTQ66789"/>
        <property type="gene ID" value="LAX5112_01093"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000485">
        <property type="entry name" value="AsnC-type_HTH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019888">
        <property type="entry name" value="Tscrpt_reg_AsnC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019887">
        <property type="entry name" value="Tscrpt_reg_AsnC/Lrp_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019885">
        <property type="entry name" value="Tscrpt_reg_HTH_AsnC-type_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01037">
        <property type="entry name" value="AsnC_trans_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00033">
        <property type="entry name" value="HTHASNC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00344">
        <property type="entry name" value="HTH_ASNC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00519">
        <property type="entry name" value="HTH_ASNC_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50956">
        <property type="entry name" value="HTH_ASNC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH asnC-type" evidence="4">
        <location>
            <begin position="5"/>
            <end position="66"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50956"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ66789.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="153" mass="17896" checksum="BA11C92D2C2802D7" modified="2015-12-09" version="1">MVKKFDQIDRALLRALQRDARLSQRELAEEVGLSQNACWRRLKTLYESGLIEGHTIRLDPAQLGLNLTVFVMIRTRHHSKEWLETFRSEVTRIPNVIDFYRLAGDYDYMLKVVAEDMNAFDQVYQRLIDKVDLDTVTSYMTMEAIADARDLPI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVK0</accession>
    <name>A0A0M6ZVK0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">L-arabinose transport system permease protein AraQ</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">araQ_3</name>
        <name evidence="7" type="ORF">LAX5112_00930</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66266.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008192730.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00930"/>
    <dbReference type="EnsemblBacteria" id="CTQ66266">
        <property type="protein sequence ID" value="CTQ66266"/>
        <property type="gene ID" value="LAX5112_00930"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="68"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="104"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="137"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="238"/>
            <end position="259"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="69"/>
            <end position="259"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ66266.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="273" mass="30777" checksum="75BF4B65F1E46796" modified="2015-12-09" version="1">MTRASDMFDRFLNTFAAWALALLWILPLAYAVWTAIHPSAYEANFDLFAPLTTENFVKAWDAAPFHRYFLNTFILVSMILVGQFFLCTLAAFAFARFEFPGRNILFALVLLQLLVMPDILMVENYQTMRLLNLVDTIPAIALPYIASGFGIFLLRQTFMTIPKELDEAARIEGASVLGVLWKVYIPLAKPTYLAYGLVSVSHHWNNFLWPLIVTNSVETRPVTVGLSVFSAIDSGIEWSVINAATLMTSGPLLIAFLLFQRQFVQSFMRAGIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWH2</accession>
    <name>A0A0M6ZWH2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_00950</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66390.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00950"/>
    <dbReference type="EnsemblBacteria" id="CTQ66390">
        <property type="protein sequence ID" value="CTQ66390"/>
        <property type="gene ID" value="LAX5112_00950"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021293">
        <property type="entry name" value="DUF2865"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11064">
        <property type="entry name" value="DUF2865"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809336" evidence="2">
        <location>
            <begin position="39"/>
            <end position="450"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="118"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="335"/>
            <end position="365"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="387"/>
            <end position="437"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="121"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="142"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="335"/>
            <end position="351"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ66390.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="450" mass="48621" checksum="F8074B09A37D7304" modified="2015-12-09" version="1">MRRWGKVMKLRSHAAFLAMSCVLAFAPAQLLIAVPAEAASCASLTSELRQLQSRGSRPSAGAQKWQTAKSQQQKALSAAERDFGYLGCNSNASAQCQALSGKVQRMRSNLRAIDRQLAKAGGGNASNQKRVRQVQAALKRQNCGAPANTRNAAANPNSGDTPRSLLARLFNPQQTPAQTKQQETAQSTKKRTNSSGKRRIPSGGTFRTLCVRTCDGYFFPVSFATGKRQFANDAARCNEICPASETELYVYKNPGGDRTDMMSLAGDLYSEQPFADRYKSEFVEGCSCRLTGSAKSRSGWTEVSNPGSSGRRIAFSDISGGLPSSYTAENIRTSRPVNLESNSTLSRTPLTKEQLPAHEDPDTRANLEKGFDVTASIAKAAEQLEHVADGSTNGKPAELPLLGNRRSPADESLETASIPPVFKSDDPGFRPAPDRDVPVRVVGPEYFYAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXC3</accession>
    <name>A0A0M6ZXC3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Type-5 uracil-DNA glycosylase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">LAX5112_01055</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="8">Belongs to the uracil-DNA glycosylase (UDG) superfamily. Type 5 (UDGb) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66680.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670938.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01055"/>
    <dbReference type="EnsemblBacteria" id="CTQ66680">
        <property type="protein sequence ID" value="CTQ66680"/>
        <property type="gene ID" value="LAX5112_01055"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033958">
        <property type="term" value="F:DNA-deoxyinosine glycosylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004844">
        <property type="term" value="F:uracil DNA N-glycosylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006284">
        <property type="term" value="P:base-excision repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd10031">
        <property type="entry name" value="UDG-F5_TTUDGB_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.470.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044147">
        <property type="entry name" value="UdgB-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005122">
        <property type="entry name" value="Uracil-DNA_glycosylase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036895">
        <property type="entry name" value="Uracil-DNA_glycosylase-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03167">
        <property type="entry name" value="UDG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00986">
        <property type="entry name" value="UDG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52141">
        <property type="entry name" value="SSF52141"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="3" id="KW-0227">DNA damage</keyword>
    <keyword evidence="7" id="KW-0234">DNA repair</keyword>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-0408">Iron</keyword>
    <keyword evidence="6" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="UDG" evidence="10">
        <location>
            <begin position="43"/>
            <end position="211"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023779"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="SMART" id="SM00986"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ66680.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="219" mass="24188" checksum="9DFC231B1F9EA628" modified="2015-12-09" version="1">MPVHDVQATPVDPPLDCRACPRLVEFREGLQAEHPEWFNAPVPSFTSPNPRLLVIGLAPGMRGANATGRPFTGDYAGDLLYKTMLDFGFAEGTYQARPDDGLALADALITNAVRCLPPQNKPTGPETKTCRPYLLSTLAANPSVRAVLALGRIAHETFLTALELKRAQFPFSHNGRHELPGTDLVLFDSYHCSRYNTNTGRLTEDMFRDVFTSIRQHIP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXX1</accession>
    <name>A0A0M6ZXX1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Short chain dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01422</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67539.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671252.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67539">
        <property type="protein sequence ID" value="CTQ67539"/>
        <property type="gene ID" value="LAX5112_01422"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67539.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="225" mass="22666" checksum="6ABBEF49B385A31A" modified="2015-12-09" version="1">MQSLENQRVLILGGSGQMGGATARAVSRLGAVAILAGRSREKLDHAAAGLEGRAETIVVDLSVPGAVADVLSEANADHIVVAMSANASASDIPGTSVAAAQDAFKRFWASYAAVQAAAKLPEHGSVTLLSGSSARTPAAGFGVWSTLHGSIEALARAATPELAPVRVNVVSPGAIGLAPDRQLIPRRGVADDIGQAIAALITNPAITGAVLDVDSGERKGTWSGH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXX3</accession>
    <name>A0A0M6ZXX3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">1,2-epoxyphenylacetyl-CoA isomerase</fullName>
            <ecNumber evidence="2">5.3.3.18</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">paaG_2</name>
        <name evidence="2" type="ORF">LAX5112_01174</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the enoyl-CoA hydratase/isomerase family.</text>
    </comment>
    <dbReference type="EC" id="5.3.3.18" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67002.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671019.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01174"/>
    <dbReference type="EnsemblBacteria" id="CTQ67002">
        <property type="protein sequence ID" value="CTQ67002"/>
        <property type="gene ID" value="LAX5112_01174"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.12.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029045">
        <property type="entry name" value="ClpP/crotonase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001753">
        <property type="entry name" value="Enoyl-CoA_hydra/iso"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014748">
        <property type="entry name" value="Enoyl-CoA_hydra_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00378">
        <property type="entry name" value="ECH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52096">
        <property type="entry name" value="SSF52096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0413">Isomerase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005254"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67002.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="260" mass="27156" checksum="DED365DF6F4AB14A" modified="2015-12-09" version="1">MSGLFRKEVHPDHLVLRNTNTARRNALSPEYYDGLLDGLAEAAKTPEITAVVLAGEGDYFCSGGDLNLLKERRNMTLEERKAAIGKLHDLIRAIKSCPKPVICAVEGGAAGAGLSIALACDMVVSAKRATFTLAYVKAGLVPDGGVTHALMNALPRGTVSKMALLGTPLTAERLYDLGVLTELADPGGVLSAAQALVAKVAAGPENAIAAIKGLLTSAETATLDVQLDAERDAMAEALGGEEARRGIASILNKTRPVFRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYE9</accession>
    <name>A0A0M6ZYE9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Amphi-Trp domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01192</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67050.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008194155.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01192"/>
    <dbReference type="EnsemblBacteria" id="CTQ67050">
        <property type="protein sequence ID" value="CTQ67050"/>
        <property type="gene ID" value="LAX5112_01192"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027598">
        <property type="entry name" value="Amphi-Trp_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20068">
        <property type="entry name" value="Amphi-Trp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR04354">
        <property type="entry name" value="amphi-Trp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Amphi-Trp" evidence="1">
        <location>
            <begin position="6"/>
            <end position="88"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF20068"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67050.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="89" mass="9718" checksum="522BB93EFD6BE3B2" modified="2015-12-09" version="1">MQNGDGSFRHESLQSRKSIKALLEAVTKGIGKGELTLSDGDEEIVLEPGGLITVRVRAERSGGSNRIDLRLTWTETADTPKPKSDLKVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZ71</accession>
    <name>A0A0M6ZZ71_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">SAM dependent carboxyl methyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01646</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68128.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671413.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01646"/>
    <dbReference type="EnsemblBacteria" id="CTQ68128">
        <property type="protein sequence ID" value="CTQ68128"/>
        <property type="gene ID" value="LAX5112_01646"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1200.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005299">
        <property type="entry name" value="MeTrfase_7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042086">
        <property type="entry name" value="MeTrfase_capping"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31009">
        <property type="entry name" value="PTHR31009"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03492">
        <property type="entry name" value="Methyltransf_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ68128.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="365" mass="40518" checksum="3DC891AD75FD52F9" modified="2015-12-09" version="1">MTDEKTGSDTATEHMVNYDRNSYMQSNLVKSRADWIERAVRDIGPQKTEFRHLDLGCGPGHTAIEAVKPSIAAYRQTSPNGHIAVCHGDQPHNDWNGLFGLVFSGSGYLQGKNIRTEASIGSFYDVMAASGSVSLATCFVASHWLSRPLLISSPGTVWYADLEGDARAAYEDLARSDWTRFLRSRAIELAPGGYLIVSTLGSTPDLEEINGIRGSARHLYRAIHKVAATMVTDGLLSEKALDRFIFPLWFPSVSDAVGPLIQNEDLEAAFEVIEASVTDAAINPQDAYQDWLADREKYAELYTGYVRGFGESSLRLHLFEKSAKTVDEADALIATFFERFEKLYRAEPGRYASETLTMTLVLRRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZS4</accession>
    <name>A0A0M6ZZS4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Putative D,D-dipeptide transport system permease protein DdpC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ddpC_3</name>
        <name evidence="7" type="ORF">LAX5112_01407</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67510.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008192668.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01407"/>
    <dbReference type="EnsemblBacteria" id="CTQ67510">
        <property type="protein sequence ID" value="CTQ67510"/>
        <property type="gene ID" value="LAX5112_01407"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="29"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="57"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="91"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="156"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="198"/>
            <end position="226"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="277"/>
            <end position="298"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="324"/>
            <end position="346"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="152"/>
            <end position="345"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ67510.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="354" mass="37902" checksum="350855DCDCAC28AC" modified="2015-12-09" version="1">MSTFVIAYYALLIGGSCLAAYFKKRELFLLIFSLTLVSFVMGIIGGVGALRFVTIAAGILALAAGTSYAFREFLIIIAPEGVAKELRTAPLTAAFGMFVIFTYAIAGIFAPVIAPFGEAEIISSAFAPADENMLLGADQLGRDMFSRIIYGARNSVGLALVATTLAFVMGAFAGLMAATKGGWFDQFMGRFADVIMSVPSLVFALLMLSIFGTNLIVIVIVVAVIYSPRVFRLTRAVAGNVVVMDYIEAAKLRGEGNWYLIRKEILPNSTAPLIAEFGLEFCFVFLLIAGLSFLGLGIQPPTADWGSMVRENATLISFGELTPLIPAAAIALLTVAVNFVVDWMLFRSSGLKEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A047</accession>
    <name>A0A0M7A047_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Sodium-cholate efflux protein MrpF</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">mrpF</name>
        <name evidence="9" type="ORF">LAX5112_01517</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the CPA3 antiporters (TC 2.A.63) subunit F family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67782.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008196590.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01517"/>
    <dbReference type="EnsemblBacteria" id="CTQ67782">
        <property type="protein sequence ID" value="CTQ67782"/>
        <property type="gene ID" value="LAX5112_01517"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015075">
        <property type="term" value="F:ion transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007208">
        <property type="entry name" value="MrpF/PhaF-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34702">
        <property type="entry name" value="PTHR34702"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04066">
        <property type="entry name" value="MrpF_PhaF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="44"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="73"/>
            <end position="93"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009212"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ67782.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="118" mass="12570" checksum="C2557D8996DD7158" modified="2015-12-09" version="1">MSSLDAFADAYLAWAVKASLGILSISFLIIVYRIVKGPSLPDRVVALDMLVAVGIGFIAAVGLLTGYYLYIDIAITLGLVGFLATVAFARFILNRGAAGDATIMDEVKDSIRRREAGQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0B3</accession>
    <name>A0A0M7A0B3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Replication-associated recombination protein A</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">rarA</name>
        <name evidence="7" type="ORF">LAX5112_01754</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">DNA-dependent ATPase that plays important roles in cellular responses to stalled DNA replication processes.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the AAA ATPase family. RarA/MGS1/WRNIP1 subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68478.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01754"/>
    <dbReference type="EnsemblBacteria" id="CTQ68478">
        <property type="protein sequence ID" value="CTQ68478"/>
        <property type="gene ID" value="LAX5112_01754"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032423">
        <property type="entry name" value="AAA_assoc_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003959">
        <property type="entry name" value="ATPase_AAA_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008921">
        <property type="entry name" value="DNA_pol3_clamp-load_cplx_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021886">
        <property type="entry name" value="MgsA_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00004">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16193">
        <property type="entry name" value="AAA_assoc_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12002">
        <property type="entry name" value="MgsA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48019">
        <property type="entry name" value="SSF48019"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA" evidence="6">
        <location>
            <begin position="30"/>
            <end position="146"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002393"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008959"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00020776"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ68478.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="413" mass="46040" checksum="4B99AF95C0F7A669" modified="2015-12-09" version="1">MRPARLEDVVGQDHLLGPEGTLSRMLKTRTLGSLIFWGPPGTGKTTIARLLANETDLAFEQISAIFSGVADLKKVFEAARARRMGGRATLLFVDEIHRFNRAQQDSFLPVMEDGTITLVGATTENPSFELNAALLSRSHVMTFQSLNKGAIEQLLARAEEVEERKLPLDEEARGVLIRMADGDGRSALTLAEDVWRASAEDEVFDADRLQEIVQRRAPIYDKGADGHYNLISALHKSVRGSDPDASLYWFCRMLDGGEDPMYLARRLIRMAVEDIGLADPNALVQANAARDAYQMLGSPEGELALAQCVIYLATAPKSNGAYTAYKAAMRDAKTSGSLLPPKHILNAPTKLMKQEGYGDGYQYDHDSPDGFSGQDYFPEDMGRKTYYNPPQRGFERDLRKRLEYWDKLRKERS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0K9</accession>
    <name>A0A0M7A0K9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01772</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68525.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ68525">
        <property type="protein sequence ID" value="CTQ68525"/>
        <property type="gene ID" value="LAX5112_01772"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809059" evidence="1">
        <location>
            <begin position="22"/>
            <end position="157"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68525.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="157" mass="17473" checksum="4FB75D1F54D7806E" modified="2015-12-09" version="1">MVKKLITSLIIGFALTSSVQAKTIEKWHAGEVDGFTRYWTTNNIGASFVVWCHPQRPVNGTLLHVVIDGKTPTPNTRMKLIIDNEIMEIPVNEQGYIDTGCATCADTFEYVWHRLRAATAIAVKFKDDSYAGFSLKGAKEILPANVCPTDWQKKQAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0L7</accession>
    <name>A0A0M7A0L7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 12">Pyruvate dehydrogenase E1 component</fullName>
            <ecNumber evidence="12">1.2.4.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="primary">aceE</name>
        <name evidence="15" type="ORF">LAX5112_01583</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3 12">Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="11 12">
            <text>(R)-N(6)-lipoyl-L-lysyl-[dihydrolipoyllysine-residue acetyltransferase] + H(+) + pyruvate = (R)-N(6)-(S(8)-acetyldihydrolipoyl)-L-lysyl-[dihydrolipoyllysine-residue acetyltransferase] + CO2</text>
            <dbReference type="Rhea" id="RHEA:19189"/>
            <dbReference type="Rhea" id="RHEA-COMP:10480"/>
            <dbReference type="Rhea" id="RHEA-COMP:10481"/>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:83099"/>
            <dbReference type="ChEBI" id="CHEBI:83111"/>
            <dbReference type="EC" id="1.2.4.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 13">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 12">
            <name>thiamine diphosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58937"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="4">Homodimer. Part of the PDH complex, consisting of multiple copies of pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3).</text>
    </comment>
    <dbReference type="EC" id="1.2.4.1" evidence="12"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67952.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671369.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01583"/>
    <dbReference type="EnsemblBacteria" id="CTQ67952">
        <property type="protein sequence ID" value="CTQ67952"/>
        <property type="gene ID" value="LAX5112_01583"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004739">
        <property type="term" value="F:pyruvate dehydrogenase (acetyl-transferring) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006096">
        <property type="term" value="P:glycolytic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.920">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004660">
        <property type="entry name" value="PDH_E1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041621">
        <property type="entry name" value="PDH_E1_M"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029061">
        <property type="entry name" value="THDP-binding"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009014">
        <property type="entry name" value="Transketo_C/PFOR_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005475">
        <property type="entry name" value="Transketolase-like_Pyr-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005474">
        <property type="entry name" value="Transketolase_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17831">
        <property type="entry name" value="PDH_E1_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00456">
        <property type="entry name" value="Transketolase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000156">
        <property type="entry name" value="Pyruvate_dh_E1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00861">
        <property type="entry name" value="Transket_pyr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52518">
        <property type="entry name" value="SSF52518"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52922">
        <property type="entry name" value="SSF52922"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="10" id="KW-0324">Glycolysis</keyword>
    <keyword evidence="8 13" id="KW-0460">Magnesium</keyword>
    <keyword evidence="7 13" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12 15" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="12 15" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9 12" id="KW-0786">Thiamine pyrophosphate</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Transket_pyr" evidence="14">
        <location>
            <begin position="402"/>
            <end position="621"/>
        </location>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="155"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="185"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="187"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001964"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00003157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011739"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00017172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023152"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00033635"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRNR" id="PIRNR000156"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="PIRSR" id="PIRSR000156-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="SMART" id="SM00861"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="CTQ67952.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="793" mass="86378" checksum="C0E1D8433772AF61" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0U6</accession>
    <name>A0A0M7A0U6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01829</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68658.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01829"/>
    <dbReference type="EnsemblBacteria" id="CTQ68658">
        <property type="protein sequence ID" value="CTQ68658"/>
        <property type="gene ID" value="LAX5112_01829"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036465">
        <property type="entry name" value="vWFA_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53300">
        <property type="entry name" value="SSF53300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68658.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="246" mass="26471" checksum="64857C04A8884354" modified="2015-12-09" version="1">MAKTRDSMNTPAKRQDQTVRSTEADVSAFLDKVKSAPRPAPGTSGRLIFALDATMSRQPTWDTACQLQGEMFQEAASIGGLKIKLVYFRGFGECRASRWFETGQELAGVMSRITCQGGHTQIRKVLSAAISAAEKEKIAAVVYVGDCMEENVDALCDKAGQLGLLGVPMFLFQEGRDQVAESAFREIARLTNGAYCPFDAGAARQLSELLKAVAVFASGGHKALTAFEKKGGQGARLLLEQLKPSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A170</accession>
    <name>A0A0M7A170_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">LAX5112_01662</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68172.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671461.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01662"/>
    <dbReference type="EnsemblBacteria" id="CTQ68172">
        <property type="protein sequence ID" value="CTQ68172"/>
        <property type="gene ID" value="LAX5112_01662"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00130">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000014">
        <property type="entry name" value="PAS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035965">
        <property type="entry name" value="PAS-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013656">
        <property type="entry name" value="PAS_4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08448">
        <property type="entry name" value="PAS_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13188">
        <property type="entry name" value="PAS_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13426">
        <property type="entry name" value="PAS_9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00091">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55785">
        <property type="entry name" value="SSF55785"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00229">
        <property type="entry name" value="sensory_box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50112">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="3 4" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="20"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="49"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="domain" description="PAS" evidence="8">
        <location>
            <begin position="91"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="domain" description="PAS" evidence="8">
        <location>
            <begin position="215"/>
            <end position="252"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="6">
        <location>
            <begin position="480"/>
            <end position="704"/>
        </location>
    </feature>
    <feature type="domain" description="Response regulatory" evidence="7">
        <location>
            <begin position="731"/>
            <end position="847"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="4">
        <location>
            <position position="782"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50112"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ68172.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="849" mass="91857" checksum="11C9D808A3CE06A4" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4K5</accession>
    <name>A0A0M7A4K5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Hydroxyquinol 1,2-dioxygenase</fullName>
            <ecNumber evidence="9">1.13.11.37</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">npcC_2</name>
        <name evidence="9" type="ORF">LAX5112_02160</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Fe(3+)</name>
            <dbReference type="ChEBI" id="CHEBI:29034"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the intradiol ring-cleavage dioxygenase family.</text>
    </comment>
    <dbReference type="EC" id="1.13.11.37" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69557.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008194566.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02160"/>
    <dbReference type="EnsemblBacteria" id="CTQ69557">
        <property type="protein sequence ID" value="CTQ69557"/>
        <property type="gene ID" value="LAX5112_02160"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047074">
        <property type="term" value="F:4-hydroxycatechol 1,2-dioxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018576">
        <property type="term" value="F:catechol 1,2-dioxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008199">
        <property type="term" value="F:ferric iron binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018581">
        <property type="term" value="F:hydroxyquinol 1,2-dioxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009712">
        <property type="term" value="P:catechol-containing compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.130.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007535">
        <property type="entry name" value="Catechol_dOase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000627">
        <property type="entry name" value="Intradiol_dOase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015889">
        <property type="entry name" value="Intradiol_dOase_core"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00775">
        <property type="entry name" value="Dioxygenase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04444">
        <property type="entry name" value="Dioxygenase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49482">
        <property type="entry name" value="SSF49482"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 9" id="KW-0223">Dioxygenase</keyword>
    <keyword evidence="6" id="KW-0408">Iron</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5 9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Dioxygenase_N" evidence="8">
        <location>
            <begin position="28"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="domain" description="INTRADIOL_DIOXYGENAS" evidence="7">
        <location>
            <begin position="107"/>
            <end position="281"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001965"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022964"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00775"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF04444"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ69557.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="290" mass="31798" checksum="9B5ADCF706EF5C20" modified="2015-12-09" version="1">MAGMSDIAFFKADASDRLFAERISGAADERLAAVLCKVAEHAHAIIRETRPSLSDWRAAIEFLTEVGHLCDERRQEWVLVSDLLGTSTLVDALNSDRPEQATPNTMRGPFYRDDVPLMQQGGNISLDGIGSPVAITVSILDLDGSPIPGARLETWQANAQGFYENQQPDLQPEHNLRGHFVSGDDGKVSYFTIRPSGYEVPKDGPLGDLLQRLGAPLCRPAHIYFQVSADDYETLTTQIFDGDDPNLGTDPLFSVKPGLIGCFKPDATGRTVLRLDVEFHLNPLPPEPRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4T6</accession>
    <name>A0A0M7A4T6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI</fullName>
            <ecNumber evidence="1">2.7.8.37</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">phnI</name>
        <name evidence="1" type="ORF">LAX5112_02188</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.7.8.37" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69627.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671830.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02188"/>
    <dbReference type="EnsemblBacteria" id="CTQ69627">
        <property type="protein sequence ID" value="CTQ69627"/>
        <property type="gene ID" value="LAX5112_02188"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061693">
        <property type="term" value="F:alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019634">
        <property type="term" value="P:organic phosphonate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008773">
        <property type="entry name" value="PhnI"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05861">
        <property type="entry name" value="PhnI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF007313">
        <property type="entry name" value="PhnI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ69627.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="373" mass="41262" checksum="18C7304BDF8644DE" modified="2015-12-09" version="1">MYVAVKGGEKAIRNAHKLTAKRRRGDTSVPALTLEQIAEQLSHAVARVMGEGSLYDETLAALAIKQSRGDLIEAAFLMRAYRTTLPRFGYSQPVDTARMLVERRISATYKDLPGGQMLGPTFDYSHRLLDFALAAEGESGDLVAETAPVEDEPMPRVTDLLGDQGLIEPDPAADENAPVGDLTRDPLSFPADRDLRLQNLARGDEGFLLALAYSTQRGYGRTHPFAGEIRYGEVEVEFFAEELGFAVTLGTIKVTECQMINQFAGSAKAPPAFTRGYGLVFGQVERKAMSMAMVDRSLRWEELGEEQVAPAQDGEFVLSHSDNIQATGFVEHLKLPHYVDFQAELDLVRRMRGEWFEKRAREEAETTAKEAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A597</accession>
    <name>A0A0M7A597_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02435</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70258.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672038.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70258">
        <property type="protein sequence ID" value="CTQ70258"/>
        <property type="gene ID" value="LAX5112_02435"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ70258.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="77" mass="8952" checksum="B347CAECD6A71672" modified="2015-12-09" version="1">MLQEKHGDLDAEKRKKLITRLLEDLSRSNPDLYYQPTSQIALQIKQQVDEGRNLNNEDRALLSPLTLRDIEVLLSLH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5X2</accession>
    <name>A0A0M7A5X2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 10">Shikimate kinase</fullName>
            <shortName evidence="10">SK</shortName>
            <ecNumber evidence="3 10">2.7.1.71</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10 11" type="primary">aroK</name>
        <name evidence="11" type="ORF">LAX5112_02264</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>ATP + shikimate = 3-phosphoshikimate + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:13121"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:36208"/>
            <dbReference type="ChEBI" id="CHEBI:145989"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.1.71"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="10">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="10">Binds 1 Mg(2+) ion per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2 10">Metabolic intermediate biosynthesis; chorismate biosynthesis; chorismate from D-erythrose 4-phosphate and phosphoenolpyruvate: step 5/7.</text>
    </comment>
    <comment type="subunit">
        <text evidence="10">Monomer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="10">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="10">Belongs to the shikimate kinase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.71" evidence="3 10"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69816.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02264"/>
    <dbReference type="EnsemblBacteria" id="CTQ69816">
        <property type="protein sequence ID" value="CTQ69816"/>
        <property type="gene ID" value="LAX5112_02264"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00053">
        <property type="reaction ID" value="UER00088"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004765">
        <property type="term" value="F:shikimate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009073">
        <property type="term" value="P:aromatic amino acid family biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008652">
        <property type="term" value="P:cellular amino acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009423">
        <property type="term" value="P:chorismate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00464">
        <property type="entry name" value="SK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00109">
        <property type="entry name" value="Shikimate_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031322">
        <property type="entry name" value="Shikimate/glucono_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000623">
        <property type="entry name" value="Shikimate_kinase/TSH1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023000">
        <property type="entry name" value="Shikimate_kinase_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01202">
        <property type="entry name" value="SKI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01128">
        <property type="entry name" value="SHIKIMATE_KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 10" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="9 10" id="KW-0057">Aromatic amino acid biosynthesis</keyword>
    <keyword evidence="8 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="10" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7 10 11" id="KW-0418">Kinase</keyword>
    <keyword evidence="10" id="KW-0460">Magnesium</keyword>
    <keyword evidence="10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6 10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 10 11" id="KW-0808">Transferase</keyword>
    <feature type="binding site" evidence="10">
        <location>
            <begin position="43"/>
            <end position="48"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="47"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="65"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="89"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="111"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="149"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="168"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012154"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ69816.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="205" mass="22513" checksum="7C040774E8435FEB" modified="2015-12-09" version="1">MKKHENTQMSPNPADGRGADTVDLKHLVAALGKRSIVLVGIMGCGKSTVGKRLAQRLGLEFVDADSEIERAANMTVSEIFSEHGEPYFRSGEERVIARLLQEGPQVLATGGGAFMSDATRSEIETNGLSIWLKVDFETVMARVRRRSTRPLLRNPDPEGTMRKLMAEREPVYAQAQLTVTSKDVPHEAVVDQIVLTLADHLYGQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5Y2</accession>
    <name>A0A0M7A5Y2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Chaperone protein DnaJ</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02269</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69826.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451077.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02269"/>
    <dbReference type="EnsemblBacteria" id="CTQ69826">
        <property type="protein sequence ID" value="CTQ69826"/>
        <property type="gene ID" value="LAX5112_02269"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd06257">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001623">
        <property type="entry name" value="DnaJ_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036869">
        <property type="entry name" value="J_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00226">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00625">
        <property type="entry name" value="JDOMAIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00271">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46565">
        <property type="entry name" value="SSF46565"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50076">
        <property type="entry name" value="DNAJ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="J" evidence="2">
        <location>
            <begin position="141"/>
            <end position="198"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="98"/>
            <end position="128"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ69826.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="199" mass="23176" checksum="6BC0BBDE4E67AFC4" modified="2015-12-09" version="1">MKLDSKIFDSIRVKPDKDRKERMTEDRHPVCEHPGCKRPGTHKAPKGRDREGQYFHFCVDHVREYNKTYNYFNGMGDDDVRTYQKDSLTGHRPTWKMGVNRQAADGPDGFDARSSMRGNAQRRAEQVRRPRERKLLTLEKRSLDVLNLPYTARGSEIKARYKELVKLNHPDANGGDRSSEDRLREIIQAYNVLKKAGFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A672</accession>
    <name>A0A0M7A672_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">RNA 2',3'-cyclic phosphodiesterase</fullName>
            <shortName evidence="2">RNA 2',3'-CPDase</shortName>
            <ecNumber evidence="2">3.1.4.58</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_02231</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'-phosphomonoester.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>a 3'-end 2',3'-cyclophospho-ribonucleotide-RNA + H2O = a 3'-end 2'-phospho-ribonucleotide-RNA + H(+)</text>
            <dbReference type="Rhea" id="RHEA:11828"/>
            <dbReference type="Rhea" id="RHEA-COMP:10464"/>
            <dbReference type="Rhea" id="RHEA-COMP:17353"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:83064"/>
            <dbReference type="ChEBI" id="CHEBI:173113"/>
            <dbReference type="EC" id="3.1.4.58"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the 2H phosphoesterase superfamily. ThpR family.</text>
    </comment>
    <dbReference type="EC" id="3.1.4.58" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69740.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02231"/>
    <dbReference type="EnsemblBacteria" id="CTQ69740">
        <property type="protein sequence ID" value="CTQ69740"/>
        <property type="gene ID" value="LAX5112_02231"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004113">
        <property type="term" value="F:2',3'-cyclic-nucleotide 3'-phosphodiesterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008664">
        <property type="term" value="F:2'-5'-RNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01940">
        <property type="entry name" value="RNA_CPDase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009097">
        <property type="entry name" value="Cyclic_Pdiesterase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014051">
        <property type="entry name" value="Phosphoesterase_HXTX"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004175">
        <property type="entry name" value="RNA_CPDase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35561">
        <property type="entry name" value="PTHR35561"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02834">
        <property type="entry name" value="LigT_PEase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55144">
        <property type="entry name" value="SSF55144"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02258">
        <property type="entry name" value="2_5_ligase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0436">Ligase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="LigT_PEase" evidence="3">
        <location>
            <begin position="9"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="domain" description="LigT_PEase" evidence="3">
        <location>
            <begin position="91"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="HXTX 1" evidence="2">
        <location>
            <begin position="37"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="HXTX 2" evidence="2">
        <location>
            <begin position="120"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="2">
        <location>
            <position position="37"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="2">
        <location>
            <position position="120"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01940"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF02834"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ69740.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="178" mass="19884" checksum="BA5B6A3D9B2CF9A5" modified="2015-12-09" version="1">MPRLFTGLEIPSETALMLSMLRGGLRGARWIDPENYHITLRFIGDIDDRTADEVVDALDRIRRDPLEIRLDGLGSFGNGKPHAVWAGVQLTSALSELQSEQERILQRLHLPAERRKYVPHVTLARCKTSNNEDVAKWLCERGNFQAPPFIAGRFVLFSAKSSVGGGPYLVEEAYPLAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6B0</accession>
    <name>A0A0M7A6B0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Aminomethyltransferase</fullName>
            <ecNumber evidence="3">2.1.2.10</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Glycine cleavage system T protein</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9" type="primary">gcvT_8</name>
        <name evidence="9" type="ORF">LAX5112_02377</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>(6S)-5,6,7,8-tetrahydrofolate + (R)-N(6)-(S(8)-aminomethyldihydrolipoyl)-L-lysyl-[protein] = (6R)-5,10-methylene-5,6,7,8-tetrahydrofolate + (R)-N(6)-dihydrolipoyl-L-lysyl-[protein] + NH4(+)</text>
            <dbReference type="Rhea" id="RHEA:16945"/>
            <dbReference type="Rhea" id="RHEA-COMP:10475"/>
            <dbReference type="Rhea" id="RHEA-COMP:10492"/>
            <dbReference type="ChEBI" id="CHEBI:15636"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="ChEBI" id="CHEBI:57453"/>
            <dbReference type="ChEBI" id="CHEBI:83100"/>
            <dbReference type="ChEBI" id="CHEBI:83143"/>
            <dbReference type="EC" id="2.1.2.10"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the GcvT family.</text>
    </comment>
    <dbReference type="EC" id="2.1.2.10" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70141.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671995.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02377"/>
    <dbReference type="EnsemblBacteria" id="CTQ70141">
        <property type="protein sequence ID" value="CTQ70141"/>
        <property type="gene ID" value="LAX5112_02377"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004047">
        <property type="term" value="F:aminomethyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008483">
        <property type="term" value="F:transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006546">
        <property type="term" value="P:glycine catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1360.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006223">
        <property type="entry name" value="GCS_T"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028896">
        <property type="entry name" value="GCST/YgfZ/DmdA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013977">
        <property type="entry name" value="GCV_T_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006222">
        <property type="entry name" value="GCV_T_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029043">
        <property type="entry name" value="GcvT/YgfZ_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027266">
        <property type="entry name" value="TrmE/GcvT_dom1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43757">
        <property type="entry name" value="PTHR43757"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01571">
        <property type="entry name" value="GCV_T"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08669">
        <property type="entry name" value="GCV_T_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101790">
        <property type="entry name" value="SSF101790"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00528">
        <property type="entry name" value="gcvT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="9" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 9" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="GCV_T" evidence="7">
        <location>
            <begin position="15"/>
            <end position="267"/>
        </location>
    </feature>
    <feature type="domain" description="GCV_T_C" evidence="8">
        <location>
            <begin position="297"/>
            <end position="373"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008609"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012616"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022576"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00031395"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF01571"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF08669"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ70141.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="383" mass="40830" checksum="CEB2EABA7DFD5203" modified="2015-12-09" version="1">MAETVADEDLKQTPLHDLHIELGGKMVPFAGYSMPVQYKLGIMGEHQHTRAKAGLFDVSHMGQAVLIGPDHETTAKALEALTPSNFVELGHGRQRYTVLLNEDGGIIDDLMVTRPLDPNDDGRLLLVVNAARKDIDYAHLRAKLPDTVKLDVVDDRALIAVQGPEAVAAVAAHAPAAAELGFMAAAPMEFDGIACHIARAGYTGEDGVEMSVPAGAAEAIARALLADDRVEAIGLGARDSLRLEAGLCLYGHDIDETTSPVEGNITFCMQKRRRDEGGFLGAERIQKELADGTDRIRVGLRLDGKAPAREGAEIALPDGDVIGSLTSGGFAPTVGAPIAMGYVPAEHASEGTQLELIVRNRRLPATVSAMPFVPNRYFRKPKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6B9</accession>
    <name>A0A0M7A6B9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Heme oxygenase, HugZ family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02575</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70685.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672165.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02575"/>
    <dbReference type="EnsemblBacteria" id="CTQ70685">
        <property type="protein sequence ID" value="CTQ70685"/>
        <property type="gene ID" value="LAX5112_02575"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.180.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019595">
        <property type="entry name" value="DUF2470"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037119">
        <property type="entry name" value="Haem_oxidase_HugZ-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012349">
        <property type="entry name" value="Split_barrel_FMN-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10615">
        <property type="entry name" value="DUF2470"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF2470" evidence="2">
        <location>
            <begin position="185"/>
            <end position="252"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF10615"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ70685.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="260" mass="28680" checksum="7F7F7207826813D8" modified="2015-12-09" version="1">MADSQENQANNEKSVIRDTDDEARKLAKELIRTARFGALAALEPETGYPLASRVAVATDLDGTPVILTSTLSGHTSAILANPACSLMVGEPGKGDPLAHPRISLFCKARRVERETEEHARLRRRYLSRHPKAELYVDFGDFSFFALGLQRASLNGGFGKAFELGKDDLLTDVADVMAWSAMESGAVDHMNEDHRDAIKLYAEVLLKAEDANWRLAGLDPEGLDLVAGDRIVRLWFKERLADPARLRETLVALALQARNQD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6D2</accession>
    <name>A0A0M7A6D2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Protein phosphatase CheZ</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Chemotaxis protein CheZ</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">LAX5112_02324</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the CheZ family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70022.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02324"/>
    <dbReference type="EnsemblBacteria" id="CTQ70022">
        <property type="protein sequence ID" value="CTQ70022"/>
        <property type="gene ID" value="LAX5112_02324"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009288">
        <property type="term" value="C:bacterial-type flagellum"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0097588">
        <property type="term" value="P:archaeal or bacterial-type flagellum-dependent cell motility"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006935">
        <property type="term" value="P:chemotaxis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050920">
        <property type="term" value="P:regulation of chemotaxis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007439">
        <property type="entry name" value="Chemotax_Pase_CheZ"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04344">
        <property type="entry name" value="CheZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0145">Chemotaxis</keyword>
    <keyword evidence="5" id="KW-0283">Flagellar rotation</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="190"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="190"/>
            <end position="204"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005908"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00018484"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022500"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022779"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00029599"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ70022.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="233" mass="26171" checksum="FF9F19F249098292" modified="2015-12-09" version="1">MDTIERLDLMAKIKQENVAQIIDFLEQNKTRDGEVSLNDVMHLAEVMSGSMHDFLSTVQPAVTEELTMIAREITRMKQEISALRANDMTGNKIPDAGRELDAIVEATENATNTIMEAAEEIMAADPSDSEAYQDLVSNKMIGIFEACTFQDITGQRISKVVHTLRFIDERVTSFIEQLRIPADFEVETEETEEERRKRELILHGPQHSGEGVSQNDIDALLGDAQADIDKLFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6Q9</accession>
    <name>A0A0M7A6Q9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02360</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70106.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02360"/>
    <dbReference type="EnsemblBacteria" id="CTQ70106">
        <property type="protein sequence ID" value="CTQ70106"/>
        <property type="gene ID" value="LAX5112_02360"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="23"/>
            <end position="44"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70106.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="53" mass="5939" checksum="07E16FD97B3BC453" modified="2015-12-09" version="1">MDNNEQGIVLTDEQKKKRRSRSIAIAVVLAALVLLFYLVTIVKLGPDIMNRAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A744</accession>
    <name>A0A0M7A744_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">4-chlorobenzoyl coenzyme A dehalogenase-1</fullName>
            <ecNumber evidence="1">3.8.1.7</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">fcbB1_2</name>
        <name evidence="1" type="ORF">LAX5112_02506</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.8.1.7" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70431.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672085.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02506"/>
    <dbReference type="EnsemblBacteria" id="CTQ70431">
        <property type="protein sequence ID" value="CTQ70431"/>
        <property type="gene ID" value="LAX5112_02506"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018787">
        <property type="term" value="F:4-chlorobenzoyl-CoA dehalogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029045">
        <property type="entry name" value="ClpP/crotonase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001753">
        <property type="entry name" value="Enoyl-CoA_hydra/iso"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00378">
        <property type="entry name" value="ECH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52096">
        <property type="entry name" value="SSF52096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ70431.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="248" mass="27000" checksum="71B01060DD73ECCB" modified="2015-12-09" version="1">MITQSLEDGVRTLRLDRPEKKNALTGQMYTDLAEALETGNTDDAVRCHLICGQPEAFTSGNDIGDFLQFAGKMQMSETPVYRFLRALVGNRKPLVASIDGIAVGVGATLLMHCDMVFASPRSVIRTPFIDLGLVPEAGSSLLGPKIMGHARAFEMLCLGRPFSAERAYQAGLINEVVSENVDEVALACAREIAAKPPEAMALSRQLLWQESQDLSDRVDEEAKVFSSRLTSPEAISAFQAFMTKKSKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A748</accession>
    <name>A0A0M7A748_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Leucine ABC transporter subunit substrate-binding protein LivK</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02158</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69553.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671811.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02158"/>
    <dbReference type="EnsemblBacteria" id="CTQ69553">
        <property type="protein sequence ID" value="CTQ69553"/>
        <property type="gene ID" value="LAX5112_02158"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028081">
        <property type="entry name" value="Leu-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006311">
        <property type="entry name" value="TAT_signal"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019546">
        <property type="entry name" value="TAT_signal_bac_arc"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13458">
        <property type="entry name" value="Peripla_BP_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10518">
        <property type="entry name" value="TAT_signal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01409">
        <property type="entry name" value="TAT_signal_seq"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809271" evidence="1">
        <location>
            <begin position="30"/>
            <end position="426"/>
        </location>
    </feature>
    <feature type="domain" description="Peripla_BP_6" evidence="2">
        <location>
            <begin position="33"/>
            <end position="375"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13458"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ69553.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="426" mass="45510" checksum="ED1D0913CE507C11" modified="2015-12-09" version="1">MWNRRTFLKTSAAAAAVAGTSGLALPARAQGTPIKLGYVSPQTGPLAAFAEADNFIISGFNAAAKAEGLNIEVIVKDSQSNPNRAAEVARELIIDDEINLMLVASTPETTNPVTTTCESEEIPCISTVAPWQPWFIGQQGNPGDPGSWEPFYYSYHFFWGLEDVISVFTNMWGQLDTNKQVGGLFPNDGDGNAWGDPNVGFPPVLDKLGYGLTDPGRYQNLTDDFTAQINAFKQANAEIITGVMIPPDFTTFWTQAKQQGFTPKAASIGKAILFPQAVEALGDAGNNLSSEVWWSPTHPFSSSLTGDSSAALAAGFTEATGRPWTQPIGFVHALFELAADVMKRANDPTDADEVSEVIAATRLNTIVGPIAWDGKGLPPFAQKNVAKTPLVGGQWRLKDGGGYDLVITDNQTAPEIPTGGKMEPIT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A769</accession>
    <name>A0A0M7A769_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">PilZ domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02684</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71005.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672244.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ71005">
        <property type="protein sequence ID" value="CTQ71005"/>
        <property type="gene ID" value="LAX5112_02684"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ71005.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="188" mass="20549" checksum="2A0D071386803BDA" modified="2015-12-09" version="1">MNALAHLQDKPEAEEEVLVVDFDNLSVISGVVSNVGEWGCRLTSPDIQELSKNIGIRPKDSDKLVKCQITSRKDSDAAVLFVKSTESFSDKRREKRNNVSIPVKISDFEGITEISGTIVDAGNNGCRVLAKSLPALPEEVLLTMKKFGKPVVAEFAWRNDTSGGLRLLWDRKVDGDEDEASESEAASA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A778</accession>
    <name>A0A0M7A778_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Acetyltransferase YpeA</fullName>
            <ecNumber evidence="2">2.3.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ypeA_2</name>
        <name evidence="2" type="ORF">LAX5112_02172</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.3.1.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69583.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02172"/>
    <dbReference type="EnsemblBacteria" id="CTQ69583">
        <property type="protein sequence ID" value="CTQ69583"/>
        <property type="gene ID" value="LAX5112_02172"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13673">
        <property type="entry name" value="Acetyltransf_10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="1"/>
            <end position="129"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69583.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="130" mass="14598" checksum="1C44087F406BA46B" modified="2015-12-09" version="1">MPVDVYQRISEENPFRAFLAALGENVLVAEIENHVVGLTAREDGDNHITDLWVDPDREGLGAGSALLHTLETRLSAKGYRIAKIDVAASNARALSLYQHRGYEIDWQERRFDPILQIELEKIGLSKTLKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A797</accession>
    <name>A0A0M7A797_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Nicotinate-nucleotide diphosphorylase (carboxylating)</fullName>
            <ecNumber evidence="4">2.4.2.19</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">Quinolinate phosphoribosyltransferase [decarboxylating]</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="12" type="primary">nadC</name>
        <name evidence="12" type="ORF">LAX5112_02454</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Involved in the catabolism of quinolinic acid (QA).</text>
    </comment>
    <comment type="pathway">
        <text evidence="2">Cofactor biosynthesis; NAD(+) biosynthesis; nicotinate D-ribonucleotide from quinolinate: step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 9">Belongs to the NadC/ModD family.</text>
    </comment>
    <dbReference type="EC" id="2.4.2.19" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70296.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672050.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02454"/>
    <dbReference type="EnsemblBacteria" id="CTQ70296">
        <property type="protein sequence ID" value="CTQ70296"/>
        <property type="gene ID" value="LAX5112_02454"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00253">
        <property type="reaction ID" value="UER00331"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004514">
        <property type="term" value="F:nicotinate-nucleotide diphosphorylase (carboxylating) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009435">
        <property type="term" value="P:NAD biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd01572">
        <property type="entry name" value="QPRTase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1170.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004393">
        <property type="entry name" value="NadC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027277">
        <property type="entry name" value="NadC/ModD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036068">
        <property type="entry name" value="Nicotinate_pribotase-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037128">
        <property type="entry name" value="Quinolinate_PRibosylTase_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002638">
        <property type="entry name" value="Quinolinate_PRibosylTrfase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022412">
        <property type="entry name" value="Quinolinate_PRibosylTrfase_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32179">
        <property type="entry name" value="PTHR32179"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01729">
        <property type="entry name" value="QRPTase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02749">
        <property type="entry name" value="QRPTase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006250">
        <property type="entry name" value="NadC_ModD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51690">
        <property type="entry name" value="SSF51690"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00078">
        <property type="entry name" value="nadC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 9 12" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="5" id="KW-0662">Pyridine nucleotide biosynthesis</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 9 12" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="QRPTase_N" evidence="11">
        <location>
            <begin position="28"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="domain" description="QRPTase_C" evidence="10">
        <location>
            <begin position="117"/>
            <end position="282"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003237"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009400"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011944"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022642"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00033102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRNR" id="PIRNR006250"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF01729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF02749"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ70296.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="286" mass="29744" checksum="5E8C0CC737FD799A" modified="2015-12-09" version="1">MPRHLPDLPRLMVDDAVKAALLEDWGRAGDITSQATIPVTARAEAVIAARKPGVLSGIALAESAFRQTDASLSFAADKQDGDRLEPGDVVARITGPARALLSAERVALNFLGHLSGIASATSLFADRIAHTNASIVCTRKTTPGLRGFEKYAVKCGGGSNHRFGLDDAILIKDNHIAVAGGVVEAVSAAKAYAGHLVKIEVEVDTLEQLHQALGAGPDVIMLDNMPPETLEKAVEITGGKALLEASGGIELDTVQAVAEAGVDLISSGWITHSAPVLDLGLDIEIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7B7</accession>
    <name>A0A0M7A7B7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Diacylglycerol kinase</fullName>
            <ecNumber evidence="2">2.7.1.107</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">dagK</name>
        <name evidence="2" type="ORF">LAX5112_02372</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.7.1.107" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70130.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671990.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02372"/>
    <dbReference type="EnsemblBacteria" id="CTQ70130">
        <property type="protein sequence ID" value="CTQ70130"/>
        <property type="gene ID" value="LAX5112_02372"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004143">
        <property type="term" value="F:diacylglycerol kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003951">
        <property type="term" value="F:NAD+ kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017438">
        <property type="entry name" value="ATP-NAD_kinase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001206">
        <property type="entry name" value="Diacylglycerol_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016064">
        <property type="entry name" value="NAD/diacylglycerol_kinase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045540">
        <property type="entry name" value="YegS/DAGK_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00781">
        <property type="entry name" value="DAGK_cat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19279">
        <property type="entry name" value="YegS_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00046">
        <property type="entry name" value="DAGKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF111331">
        <property type="entry name" value="SSF111331"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50146">
        <property type="entry name" value="DAGK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="DAGKc" evidence="1">
        <location>
            <begin position="18"/>
            <end position="148"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70130.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="308" mass="32142" checksum="532134C4D20F3D25" modified="2015-12-09" version="1">MIDSLQTAPVLSGVEAPETAGLVLIMANPTSGGYNSQKLQDVKGHLEAAGCRVDLRLTTHAGEIGEVCAAPGLAAETLIIAGGDGSVNEALTGLQHKKRAPNLAIIPFGTANVLALELGLPKGAKEIAGMILNKRTKPLHYGLANDRPFVLMASAGFDAEVVHAVPLDLKRRLKKFAYVITAIRIGLTRKATPLTISLDGAAPVYGRFAVASNARHYGGPFVICPGGATDPGLHMLILEQDDPWSSIRYSIALMLGRISKAKGATVQAFQEAVISSPEPVAAQVDGDPFAVTPLNIRAAANSVPILVP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7D6</accession>
    <name>A0A0M7A7D6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">2,4-dichlorophenol 6-monooxygenase</fullName>
            <ecNumber evidence="2">1.14.13.20</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">tfdB</name>
        <name evidence="2" type="ORF">LAX5112_02153</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.14.13.20" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69544.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671806.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02153"/>
    <dbReference type="EnsemblBacteria" id="CTQ69544">
        <property type="protein sequence ID" value="CTQ69544"/>
        <property type="gene ID" value="LAX5112_02153"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018666">
        <property type="term" value="F:2,4-dichlorophenol 6-monooxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071949">
        <property type="term" value="F:FAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002938">
        <property type="entry name" value="FAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01494">
        <property type="entry name" value="FAD_binding_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0503">Monooxygenase</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FAD_binding_3" evidence="1">
        <location>
            <begin position="6"/>
            <end position="370"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01494"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69544.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="585" mass="64451" checksum="A3A65C4FE7047667" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8C6</accession>
    <name>A0A0M7A8C6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Glutamine-binding periplasmic protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">glnH_3</name>
        <name evidence="5" type="ORF">LAX5112_02633</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70861.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672209.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02633"/>
    <dbReference type="EnsemblBacteria" id="CTQ70861">
        <property type="protein sequence ID" value="CTQ70861"/>
        <property type="gene ID" value="LAX5112_02633"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015276">
        <property type="term" value="F:ligand-gated ion channel activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001320">
        <property type="entry name" value="Iontro_rcpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00062">
        <property type="entry name" value="PBPb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00079">
        <property type="entry name" value="PBPe"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="7"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="159"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="222"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="domain" description="PBPb" evidence="3">
        <location>
            <begin position="46"/>
            <end position="375"/>
        </location>
    </feature>
    <feature type="domain" description="PBPe" evidence="4">
        <location>
            <begin position="46"/>
            <end position="374"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00062"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00079"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ70861.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="376" mass="40961" checksum="5670C39CD2953EB2" modified="2015-12-09" version="1">MLLNFRVFLRAVFPIIMLISAKILVVSPGAAQDAGQASAAAAGEAPLKVGVRVSPPFVMQTADGYTGMAIELWEDLAAAAGVEYQYEPYPNVRALIDATAEGQTDAAISNLTITKARLEKMDFTQPWFDSGLRIMVGSEGSTSFWEVVKGLQEAGFLKAYGWLAFVIVVATLLMTLFDRRFDKSFSQKWPDGLADSFYSVMSVVTSGKAPSRKNLFGWIGRVWQAIWLVCGLAVMAFITSSVTSVMTTLSLHNQIQSVADLPGKVVGVFDGSVGEDYSREQGWSVMVFDELDQGVAALDNGEIDAFVGDAPTLEYYDHTNPNADVEVVGPLFDPNKYGIALSLRSRNTRAFNIELLAAKESGFVEDLRVEYLGPRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8D6</accession>
    <name>A0A0M7A8D6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Ferredoxin VI</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_02731</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>2Fe-2S cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49601"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the adrenodoxin/putidaredoxin family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71139.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672281.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02731"/>
    <dbReference type="EnsemblBacteria" id="CTQ71139">
        <property type="protein sequence ID" value="CTQ71139"/>
        <property type="gene ID" value="LAX5112_02731"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051537">
        <property type="term" value="F:2 iron, 2 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140647">
        <property type="term" value="P:P450-containing electron transport chain"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00207">
        <property type="entry name" value="fer2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036010">
        <property type="entry name" value="2Fe-2S_ferredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001041">
        <property type="entry name" value="2Fe-2S_ferredoxin-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001055">
        <property type="entry name" value="Adrenodoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018298">
        <property type="entry name" value="Adrenodoxin_Fe-S_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012675">
        <property type="entry name" value="Beta-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23426">
        <property type="entry name" value="PTHR23426"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00111">
        <property type="entry name" value="Fer2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00355">
        <property type="entry name" value="ADRENODOXIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54292">
        <property type="entry name" value="SSF54292"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51085">
        <property type="entry name" value="2FE2S_FER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00814">
        <property type="entry name" value="ADX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="2Fe-2S ferredoxin-type" evidence="3">
        <location>
            <begin position="2"/>
            <end position="105"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001939"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010914"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ71139.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="106" mass="11287" checksum="E12233301B961D8B" modified="2015-12-09" version="1">MPKITFVTADGARTDVDAAEGSTVMENAIKNMVQGIEAECGGACACATCHVYVDDAWSGKTGSPEPMEEDMLDFAYDVKPTSRLSCQIKVTGDMDGLVVHVPERQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8T6</accession>
    <name>A0A0M7A8T6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Cell division protein FtsQ</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">ftsQ</name>
        <name evidence="10" type="ORF">LAX5112_02619</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Essential cell division protein.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cell inner membrane</location>
            <topology evidence="8">Single-pass type II membrane protein</topology>
        </subcellularLocation>
        <text evidence="8">Localizes to the division septum.</text>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the FtsQ/DivIB family. FtsQ subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70816.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02619"/>
    <dbReference type="EnsemblBacteria" id="CTQ70816">
        <property type="protein sequence ID" value="CTQ70816"/>
        <property type="gene ID" value="LAX5112_02619"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032153">
        <property type="term" value="C:cell division site"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0090529">
        <property type="term" value="P:cell septum assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043093">
        <property type="term" value="P:FtsZ-dependent cytokinesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.11690">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00911">
        <property type="entry name" value="FtsQ_subfam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005548">
        <property type="entry name" value="Cell_div_FtsQ/DivIB_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026579">
        <property type="entry name" value="FtsQ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045335">
        <property type="entry name" value="FtsQ_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034746">
        <property type="entry name" value="POTRA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013685">
        <property type="entry name" value="POTRA_FtsQ_type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35851">
        <property type="entry name" value="PTHR35851"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03799">
        <property type="entry name" value="FtsQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08478">
        <property type="entry name" value="POTRA_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51779">
        <property type="entry name" value="POTRA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 8" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="3 8 10" id="KW-0132">Cell division</keyword>
    <keyword evidence="2 8" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="1 8" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="domain" description="POTRA" evidence="9">
        <location>
            <begin position="85"/>
            <end position="153"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022519"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00911"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51779"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ70816.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="304" mass="33586" checksum="2CA6169259835024" modified="2015-12-09" version="1">MLSLGRKHKRDAYAPLEAELAPRGRGVARLHRQPVWRAAGRLTDLPRWTGSAAAIGFLTLTISYAIVIGGHGRIVSDALLSAVGFGIEAVKLSGQREINEFQILEALEIHDGSSLILFDADGARERLNDMAWVKNASVMKFYPSTLQIRIEEKVPYALWQRGDLVSIVNEAGEVITDEVDGRYANLLLVVNHGAQRRAGEISAALATVPDLRPRVRAAFLISDRRWDLKLENGIFVRLPEENMEAALAELVRMDKEDGLLARDIMAIDMRLGDRITVRLSEEAAEQRKIMTGGRGRSGNGGRDT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9D9</accession>
    <name>A0A0M7A9D9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">D-ribose-binding periplasmic protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">rbsB_3</name>
        <name evidence="3" type="ORF">LAX5112_02691</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71026.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008193365.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02691"/>
    <dbReference type="EnsemblBacteria" id="CTQ71026">
        <property type="protein sequence ID" value="CTQ71026"/>
        <property type="gene ID" value="LAX5112_02691"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025997">
        <property type="entry name" value="SBP_2_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13407">
        <property type="entry name" value="Peripla_BP_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809167" evidence="1">
        <location>
            <begin position="23"/>
            <end position="338"/>
        </location>
    </feature>
    <feature type="domain" description="Peripla_BP_4" evidence="2">
        <location>
            <begin position="29"/>
            <end position="295"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13407"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ71026.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="338" mass="35049" checksum="E51528252C3EF489" modified="2015-12-09" version="1">MIRKLLATGSVLAAMAATPAMAADLSACLITKTDTNPFFVKMKEGATAKAEELGIELKSFAGKVDGDHETQVAAIETCIADGAKGILLTASDTSSIVPAVKQARDNGLLVIALDTPLSPIDAADATFATDNFLAGELIGKWAAGSLGDEAANAKIAMLDLGISQPTVGVLRDQGFLQGFGIDLGDPNKWGDETDPRIVGNDVTAGNEEGGRRAMENLLAKDPMINVVYTINEPAAAGAYEALKSIGRENDVLIVSVDGGCPGVQNVKDGVIGATSQQYPLLMASLGIEAIKEWADNGNKPEPTPGKEFFDTGVALVTDKPVDGVESIDTTEGTNLCWG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAQ0</accession>
    <name>A0A0M7AAQ0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Acetophenone carboxylase gamma subunit</fullName>
            <ecNumber evidence="5">6.4.1.8</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">apc3_2</name>
        <name evidence="5" type="ORF">LAX5112_02578</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the oxoprolinase family.</text>
    </comment>
    <dbReference type="EC" id="6.4.1.8" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70694.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672297.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02578"/>
    <dbReference type="EnsemblBacteria" id="CTQ70694">
        <property type="protein sequence ID" value="CTQ70694"/>
        <property type="gene ID" value="LAX5112_02578"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016874">
        <property type="term" value="F:ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008040">
        <property type="entry name" value="Hydant_A_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002821">
        <property type="entry name" value="Hydantoinase_A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003692">
        <property type="entry name" value="Hydantoinase_B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045079">
        <property type="entry name" value="Oxoprolinase_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11365">
        <property type="entry name" value="PTHR11365"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05378">
        <property type="entry name" value="Hydant_A_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01968">
        <property type="entry name" value="Hydantoinase_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02538">
        <property type="entry name" value="Hydantoinase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0436">Ligase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Hydant_A_N" evidence="4">
        <location>
            <begin position="7"/>
            <end position="186"/>
        </location>
    </feature>
    <feature type="domain" description="Hydantoinase_A" evidence="2">
        <location>
            <begin position="205"/>
            <end position="490"/>
        </location>
    </feature>
    <feature type="domain" description="Hydantoinase_B" evidence="3">
        <location>
            <begin position="687"/>
            <end position="1193"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010403"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF02538"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF05378"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ70694.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="1194" mass="128855" checksum="AFDD7BA505787887" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAS4</accession>
    <name>A0A0M7AAS4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02918</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71717.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ71717">
        <property type="protein sequence ID" value="CTQ71717"/>
        <property type="gene ID" value="LAX5112_02918"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="52"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="65"/>
            <end position="83"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71717.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="153" mass="17422" checksum="C06DC99966BAC653" modified="2015-12-09" version="1">MRRPGLLNNLQEVQRDLPIASMIVRHQPGKLAPVRLFRFHFIHQGQEIASQPGCIGGRSGKPKRLIGPQSQSFAAQSPFPGHNQPGHRQMPVDQRHRWRQRFEVRAGTQSLDVLVGIADGPDDWQEYRPATEGPLKQVWQQARSAARRQVKRC</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABZ6</accession>
    <name>A0A0M7ABZ6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Phosphohistidine phosphatase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02740</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71164.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672289.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02740"/>
    <dbReference type="EnsemblBacteria" id="CTQ71164">
        <property type="protein sequence ID" value="CTQ71164"/>
        <property type="gene ID" value="LAX5112_02740"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd07067">
        <property type="entry name" value="HP_PGM_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1240">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013078">
        <property type="entry name" value="His_Pase_superF_clade-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029033">
        <property type="entry name" value="His_PPase_superfam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00300">
        <property type="entry name" value="His_Phos_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00855">
        <property type="entry name" value="PGAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53254">
        <property type="entry name" value="SSF53254"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ71164.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="175" mass="19683" checksum="98574516143ED669" modified="2015-12-09" version="1">MRLFLFRHAKSDWGDPDLADFDRPLNGRGKSAARVMGRYLREQNLLPNRILCSTSLRTRETLSRILPFQPQEAQIHLLSDIYNESDLSYTNVIRRHGGRAQQLMVIGHNPATEQTAIELGGTGDADAMADLRVKFPTGALAVIDFDIASWDEIQIGTGHLERFIKPRDLAAKLDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AC78</accession>
    <name>A0A0M7AC78_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Peptidase S74 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03025</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72052.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672514.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72052">
        <property type="protein sequence ID" value="CTQ72052"/>
        <property type="gene ID" value="LAX5112_03025"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030392">
        <property type="entry name" value="S74_ICA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13884">
        <property type="entry name" value="Peptidase_S74"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase S74" evidence="2">
        <location>
            <begin position="84"/>
            <end position="127"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ72052.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="179" mass="19128" checksum="4939B63D24C1AFF5" modified="2015-12-09" version="1">MTEVSTMRELTVEECDQVSGGVVLLGVSIGISSLVALKIGINVGSAMAGIIAILDNNGLYNRDSLEQIAGSTQHAHSNGGGFGSDRRIKTDVQLIGHLGHLELDVYSWEYTNEPGARYVGVMAQDLLAREDLSHAVFIFEDGPHKGFYGVDYSVLGLICVRESEFDGNVDTLLVTAIAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACF0</accession>
    <name>A0A0M7ACF0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">ATP-dependent zinc metalloprotease FtsH</fullName>
            <ecNumber evidence="4">3.4.24.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">ftsH_2</name>
        <name evidence="4" type="ORF">LAX5112_03286</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.4.24.-" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72758.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03286"/>
    <dbReference type="EnsemblBacteria" id="CTQ72758">
        <property type="protein sequence ID" value="CTQ72758"/>
        <property type="gene ID" value="LAX5112_03286"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004176">
        <property type="term" value="F:ATP-dependent peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004222">
        <property type="term" value="F:metalloendopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.760">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003959">
        <property type="entry name" value="ATPase_AAA_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000642">
        <property type="entry name" value="Peptidase_M41"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037219">
        <property type="entry name" value="Peptidase_M41-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00004">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01434">
        <property type="entry name" value="Peptidase_M41"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF140990">
        <property type="entry name" value="SSF140990"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0482">Metalloprotease</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-0645">Protease</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA" evidence="3">
        <location>
            <begin position="241"/>
            <end position="380"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ72758.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="645" mass="71091" checksum="3812AFA131BE93CF" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AD26</accession>
    <name>A0A0M7AD26_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_03217</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72537.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03217"/>
    <dbReference type="EnsemblBacteria" id="CTQ72537">
        <property type="protein sequence ID" value="CTQ72537"/>
        <property type="gene ID" value="LAX5112_03217"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="6"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="147"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="318"/>
            <end position="435"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="210"/>
            <end position="237"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="277"/>
            <end position="304"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="374"/>
            <end position="388"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="402"/>
            <end position="426"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ72537.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="435" mass="46994" checksum="3185CE666C00E620" modified="2015-12-09" version="1">MIEAAMYVALGFCTAGLICLAILPAFYRRAARLTEEALRAVNPSSYAEVRAAQDQARAQHAVDLRRVEQSLNAEREKAAKWHVDATRLKTEMAALEKSHEGKIANLKEELSAKAADEKSADMLSSEVAQLKQKLAEAEKALAESWLQKQETGEDVPAKGTQGEDTSDWLPATDTMALATITGLEAEVATLKARLARAEPSVAGELDAERTETARARLAELEAQLVDTEANFITAQAEVTRLSLQLDAADIKDSDLQKHLTEQLEALATENAQRLSQLKDKDRTVNRLTGEIKKLRQDLSATSALAQVRHDFRQLVAQVSADPADKKKAVAKPSSKTAGNSAPVSNTAGDMKPKRRTRRTSASAEKPNTAPPPTPKAAESSSTTDIANAAEALVSRIVASTRKNKEPSSDNDQVPPEKTDPPTVKKPKQRRTAGAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADC4</accession>
    <name>A0A0M7ADC4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02890</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71634.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672404.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02890"/>
    <dbReference type="EnsemblBacteria" id="CTQ71634">
        <property type="protein sequence ID" value="CTQ71634"/>
        <property type="gene ID" value="LAX5112_02890"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009874">
        <property type="entry name" value="DUF1428"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07237">
        <property type="entry name" value="DUF1428"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF007028">
        <property type="entry name" value="UCP007028"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ71634.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="119" mass="13235" checksum="7646DDD1F7EC7AC2" modified="2015-12-09" version="1">MSYVQGFLAPVKTTKKADYAVIAEKSWALFKEYGAVSSCEAWGTDVPDGEVTSFPMAVKKAPDETVVFSWIIWPDKTTADAAMGKMEEDPRWGEIMPNADEVFSLKRMIFGGFEPLLET</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADM6</accession>
    <name>A0A0M7ADM6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Peptidase M15</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03139</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72320.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03139"/>
    <dbReference type="EnsemblBacteria" id="CTQ72320">
        <property type="protein sequence ID" value="CTQ72320"/>
        <property type="gene ID" value="LAX5112_03139"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1380.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010275">
        <property type="entry name" value="DUF882"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009045">
        <property type="entry name" value="Hedgehog_sig/DD-Pept_Zn-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37425">
        <property type="entry name" value="PTHR37425"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05951">
        <property type="entry name" value="Peptidase_M15_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55166">
        <property type="entry name" value="SSF55166"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="239"/>
            <end position="347"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="362"/>
            <end position="395"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="467"/>
            <end position="505"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="239"/>
            <end position="270"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72320.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="597" mass="63657" checksum="05D878EEB8EA0603" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADV9</accession>
    <name>A0A0M7ADV9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03507</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73335.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ73335">
        <property type="protein sequence ID" value="CTQ73335"/>
        <property type="gene ID" value="LAX5112_03507"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ73335.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="65" mass="6914" checksum="7494204E029845A6" modified="2015-12-09" version="1">MAAEDSTGEALNPTLCLAMTANELETEQKPSPRQLPKTVCNPTMALAIYASLYNEADASGERAGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AE39</accession>
    <name>A0A0M7AE39_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03352</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72891.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72891">
        <property type="protein sequence ID" value="CTQ72891"/>
        <property type="gene ID" value="LAX5112_03352"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ72891.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="71" mass="8213" checksum="D3165D7CF1595269" modified="2015-12-09" version="1">MDPRVKPEDDGGGLIGLIRVPVRLPKVPDFSLVLAPMRKIFKNTHMLKYVRSIRTGRILCARVFYLCQLRF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AE43</accession>
    <name>A0A0M7AE43_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Transcriptional activator NphR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">nphR_3</name>
        <name evidence="6" type="ORF">LAX5112_03007</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72013.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03007"/>
    <dbReference type="EnsemblBacteria" id="CTQ72013">
        <property type="protein sequence ID" value="CTQ72013"/>
        <property type="gene ID" value="LAX5112_03007"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032687">
        <property type="entry name" value="AraC-type_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12625">
        <property type="entry name" value="Arabinose_bd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="5">
        <location>
            <begin position="236"/>
            <end position="334"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="342"/>
            <end position="366"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ72013.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="366" mass="41623" checksum="8A7D7EB695FFA3BF" modified="2015-12-09" version="1">MPLDGEWARADVLRVLRDVCPNDRLDWAHIAKVYNFDLQALDDPQGIVPITAWHGTFEYVAKSLNDDAIMFDMFNKLDVGSFSIFDYVFACAPSLRDACQAWVRFIQIRTNAYRIKFEETETGAFIEWPSLEGRGEWRQNMFARIGWAARQLEHALDMNVPPILIEIATYPPEKTSAFQKKYQGRIQFRAPTNRISLPKALLNRPLRRQDPHLYQIILKSALQELDEFGQMVSPISRLANEIAASLSEGGAALPKIAAKIGMSQRAIQRLLAKEGTTYRQLNEEIRKSAAERYLRSTDLPMKEIAFLLGFSELSTFSRAVKLWFGESPRKVREKLAACRTRSAEEDDALETPLSSVVPPDTLVKPT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AE93</accession>
    <name>A0A0M7AE93_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Putative diguanylate cyclase YegE</fullName>
            <ecNumber evidence="4">2.7.7.65</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">yegE</name>
        <name evidence="4" type="ORF">LAX5112_03382</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.7.7.65" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72951.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672788.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03382"/>
    <dbReference type="EnsemblBacteria" id="CTQ72951">
        <property type="protein sequence ID" value="CTQ72951"/>
        <property type="gene ID" value="LAX5112_03382"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052621">
        <property type="term" value="F:diguanylate cyclase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd01949">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007892">
        <property type="entry name" value="CHASE4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000160">
        <property type="entry name" value="GGDEF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05228">
        <property type="entry name" value="CHASE4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00990">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00267">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00254">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50887">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="42"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="274"/>
            <end position="297"/>
        </location>
    </feature>
    <feature type="domain" description="GGDEF" evidence="3">
        <location>
            <begin position="354"/>
            <end position="482"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ72951.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="498" mass="54963" checksum="E175A9D78A4155A1" modified="2015-12-09" version="1">MLSTEIGASQKETSKAPTGHQQSDAPAGKARLKRIHKLSRPFWASFIIGAVSLLVFAAFLVNALDRQAITSSERVMGSVLGERLDRLSELTLEYAFWDESVDRLVNGFDEDWIETTFVDYIYSDLGIIGVHVLDGENTDRLHVYEDAVTDGTSMKRYGPDAEKLINRARRTPTNETPIPATGFLGAIDDLYLASAARMTTYDAETDTSTDHVMMFVRPLDDEALADLGEKFQLPGLQITTEDPSYFQAHWPIRAEDGTTLANFVWNPVLPGQRLLPPLALGLIIVYAGMMIAARAFLKQAMHMVSALDAAKRRTERAKELLAHQANTDALTNLGNRWSFEQTLDTLSAKADGTKEFALVCFDLDRFKTINDTLGHETGDEVLKYVGETLSSLTYPQDKVFRLGGDEFVIVFGLTDRERVLAVAKEAISILSQRVTLNGHSCHFGASAGIAYSTEPVNLLRRADTALYASKKKGRGQVTVYIPDSTDTSAQRLPATETL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEJ2</accession>
    <name>A0A0M7AEJ2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03032</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72064.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672520.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03032"/>
    <dbReference type="EnsemblBacteria" id="CTQ72064">
        <property type="protein sequence ID" value="CTQ72064"/>
        <property type="gene ID" value="LAX5112_03032"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016790">
        <property type="term" value="F:thiolester hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006633">
        <property type="term" value="P:fatty acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002864">
        <property type="entry name" value="Acyl-ACP_thioesterase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029069">
        <property type="entry name" value="HotDog_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01643">
        <property type="entry name" value="Acyl-ACP_TE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54637">
        <property type="entry name" value="SSF54637"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ72064.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="289" mass="31916" checksum="A710ECEBFD07D100" modified="2015-12-09" version="1">MALSPTLHSFTNRWECDENDHLNVQFYFSRFDEADQQFRLISGLSDSVAGARRVRHVRYHKELRTGDLISVHSGIAFDGPHLLTVVHEMRNAGTGTLSATAIDGYEPNPGTVKSLRQRFTDYQTPMSSDATPRGLSASPASARPALDKLLQNNGALCFRGTVMPRHVNADGKADDQFALSCCTDGVPHVWERSPLTQAYLSQHNLGRVAIEMKLIWHSPLKSGDMIVVASGFTGSQNKTFGMRHHVFESRTNRLAATLDVVALTMDLDARRAVDLPEEARTAISKMVLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="32" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFE6</accession>
    <name>A0A0M7AFE6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">LexA repressor</fullName>
            <ecNumber evidence="12">3.4.21.88</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12 17" type="primary">lexA</name>
        <name evidence="17" type="ORF">LAX5112_03435</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="18" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="18">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="12">Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="12">
            <text>Hydrolysis of Ala-|-Gly bond in repressor LexA.</text>
            <dbReference type="EC" id="3.4.21.88"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="12">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 12 13">Belongs to the peptidase S24 family.</text>
    </comment>
    <dbReference type="EC" id="3.4.21.88" evidence="12"/>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73136.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451950.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03435"/>
    <dbReference type="EnsemblBacteria" id="CTQ73136">
        <property type="protein sequence ID" value="CTQ73136"/>
        <property type="gene ID" value="LAX5112_03435"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004252">
        <property type="term" value="F:serine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045892">
        <property type="term" value="P:negative regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009432">
        <property type="term" value="P:SOS response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd06529">
        <property type="entry name" value="S24_LexA-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00015">
        <property type="entry name" value="LexA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006200">
        <property type="entry name" value="LexA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039418">
        <property type="entry name" value="LexA-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036286">
        <property type="entry name" value="LexA/Signal_pep-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006199">
        <property type="entry name" value="LexA_DNA-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006197">
        <property type="entry name" value="Peptidase_S24_LexA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015927">
        <property type="entry name" value="Peptidase_S24_S26A/B/C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01726">
        <property type="entry name" value="LexA_DNA_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00717">
        <property type="entry name" value="Peptidase_S24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00726">
        <property type="entry name" value="LEXASERPTASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51306">
        <property type="entry name" value="SSF51306"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00498">
        <property type="entry name" value="lexA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 12 13" id="KW-0068">Autocatalytic cleavage</keyword>
    <keyword evidence="4 12" id="KW-0227">DNA damage</keyword>
    <keyword evidence="10 12" id="KW-0234">DNA repair</keyword>
    <keyword evidence="3 12" id="KW-0235">DNA replication</keyword>
    <keyword evidence="8 12" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5 12 13" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 12" id="KW-0678">Repressor</keyword>
    <keyword evidence="11 12" id="KW-0742">SOS response</keyword>
    <keyword evidence="9 12" id="KW-0804">Transcription</keyword>
    <keyword evidence="7 12" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="LexA_DNA_bind" evidence="16">
        <location>
            <begin position="2"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_S24" evidence="15">
        <location>
            <begin position="116"/>
            <end position="231"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="12">
        <location>
            <begin position="26"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="14">
        <location>
            <begin position="78"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="active site" description="For autocatalytic cleavage activity" evidence="12">
        <location>
            <position position="158"/>
        </location>
    </feature>
    <feature type="active site" description="For autocatalytic cleavage activity" evidence="12">
        <location>
            <position position="196"/>
        </location>
    </feature>
    <feature type="site" description="Cleavage; by autolysis" evidence="12">
        <location>
            <begin position="123"/>
            <end position="124"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007484"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022813"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023236"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU003991"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="Pfam" id="PF00717"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="Pfam" id="PF01726"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="CTQ73136.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="237" mass="25793" checksum="DF35DAE064B5C549" modified="2015-12-09" version="1">MLTRKQYELLMFIHERLKETGVPPSFDEMKDALDLRSKSGIHRLITALEERGFIRRLPNRARAMEVVRLPDSIAPGLGAPRPRGSFSPEVIEGSLGKPAPAPAPAPEPVAASTEIPVMGRIAAGVPIEAIQTHSHSISVPPELLGKGEHYALEVRGDSMIEAGILDGDTVLIRRTESADSGDIVVALVDDEEATLKRLRKKGPSIALEAANPAYETRIFGPGRVRVQGKLVSLFRRY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFK2</accession>
    <name>A0A0M7AFK2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03396</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72990.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672800.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03396"/>
    <dbReference type="EnsemblBacteria" id="CTQ72990">
        <property type="protein sequence ID" value="CTQ72990"/>
        <property type="gene ID" value="LAX5112_03396"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021302">
        <property type="entry name" value="DUF2780_VcgC/VcgE"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11075">
        <property type="entry name" value="DUF2780"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ72990.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="129" mass="13148" checksum="C0B7D965254062EB" modified="2015-12-09" version="1">MQELISRIMARAGIEQQQAEDGLGIILGFLNKEAPAEKMQQVLDALPGAGDLLAARAGTSGGGLLGGLGNMMGGTMGAMAALNELNKAGLGMGEIQGLVKELVSYAKEKAGDDVVDEVIAKIPGLSQIV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFU4</accession>
    <name>A0A0M7AFU4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">DNA-binding protein HRm</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">hupB</name>
        <name evidence="4" type="ORF">LAX5112_03499</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the bacterial histone-like protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73312.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008192569.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03499"/>
    <dbReference type="EnsemblBacteria" id="CTQ73312">
        <property type="protein sequence ID" value="CTQ73312"/>
        <property type="gene ID" value="LAX5112_03499"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030527">
        <property type="term" value="F:structural constituent of chromatin"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.520.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000119">
        <property type="entry name" value="Hist_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020816">
        <property type="entry name" value="Histone-like_DNA-bd_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010992">
        <property type="entry name" value="IHF-like_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33175">
        <property type="entry name" value="PTHR33175"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00216">
        <property type="entry name" value="Bac_DNA_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01727">
        <property type="entry name" value="DNABINDINGHU"/>
    </dbReference>
    <dbReference type="SMART" id="SM00411">
        <property type="entry name" value="BHL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47729">
        <property type="entry name" value="SSF47729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00045">
        <property type="entry name" value="HISTONE_LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010529"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU003939"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ73312.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="91" mass="9436" checksum="3250F53C5C7D4DC8" modified="2015-12-09" version="1">MNKNDLIAAVAEKTGLTKAQAGEAVDASFEAVTETLKGGGEVRIIGFGNFTVSERAATEGRNPRTGETIQIPASKTPKFKAGKGLKDAVNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFY3</accession>
    <name>A0A0M7AFY3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">AsmA_2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03262</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72663.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672681.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72663">
        <property type="protein sequence ID" value="CTQ72663"/>
        <property type="gene ID" value="LAX5112_03262"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032712">
        <property type="entry name" value="AsmA_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13502">
        <property type="entry name" value="AsmA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="domain" description="AsmA_2" evidence="2">
        <location>
            <begin position="638"/>
            <end position="740"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13502"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ72663.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="744" mass="79086" checksum="6255681CBBDC5680" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AG77</accession>
    <name>A0A0M7AG77_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">HTH-type transcriptional regulator GltC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">gltC_5</name>
        <name evidence="3" type="ORF">LAX5112_03248</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72624.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672668.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03248"/>
    <dbReference type="EnsemblBacteria" id="CTQ72624">
        <property type="protein sequence ID" value="CTQ72624"/>
        <property type="gene ID" value="LAX5112_03248"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="12"/>
            <end position="69"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ72624.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="303" mass="32674" checksum="D0F9A223F830CD86" modified="2015-12-09" version="1">MKKLPGTGTELIDMDLYRTFLVIAETSSFSKASDLIGRTPSAVSMQIKKLETILGVAVFAREGRAVRLTPEGEALLGYARRILMLNEEAVSLFVSPSVEGEVRFGAPADFGTRFLPNFLSRFARSHPGVNVDVHLDGSSALDDKIRKGELDLVLSTVRPGAPMPTGTDVVFSEPLVWVGLEGGIAYDRDPLPLAVSTPGCPWRRAARIALDGAQKPYRISYTSFHSAGQEAALLADLAVAPFPASVVEPPLQVLDDRHGLPKIGDYHIVMKQRPRAGRATHAFAEHVEECFKEITLGGALASG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGP6</accession>
    <name>A0A0M7AGP6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Alpha/beta hydrolase family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03368</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72923.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672778.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03368"/>
    <dbReference type="EnsemblBacteria" id="CTQ72923">
        <property type="protein sequence ID" value="CTQ72923"/>
        <property type="gene ID" value="LAX5112_03368"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809646" evidence="1">
        <location>
            <begin position="35"/>
            <end position="302"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72923.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="302" mass="33809" checksum="016430E01FD9152C" modified="2015-12-09" version="1">MLNSFLKALQARFAKLPVVFLATVFCSVSINAHAETLKPYKDRLFRYKKVTETLYNGDFTVVEYIKQRDLHGRDQIPERQVYGNYVSYKPKRSRGSGELKANGRTVSYMGTGKWKGGAKTIVIYIHGQGGNRFQGMNDVSFGGNFNRIQNLMVRNGGAYLTVDIAHFDKRGTADVAALIQQQKQLSPGAKVVVACGSMGGIICWNLVKNGNYARLVNGIMLLGSPKDPNIFSAGVLSRNVPIYMGQGTLDRVYNWETQAQFFKQIKSKAPNYPIKFTLFDTGTHGTPIRMTDWRLVLNWMLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGV2</accession>
    <name>A0A0M7AGV2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 5">50S ribosomal protein L21</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4 7" type="primary">rplU</name>
        <name evidence="7" type="ORF">LAX5112_03609</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4 5">This protein binds to 23S rRNA in the presence of protein L20.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Part of the 50S ribosomal subunit. Contacts protein L20.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 4 5">Belongs to the bacterial ribosomal protein bL21 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73646.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672963.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03609"/>
    <dbReference type="EnsemblBacteria" id="CTQ73646">
        <property type="protein sequence ID" value="CTQ73646"/>
        <property type="gene ID" value="LAX5112_03609"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01363">
        <property type="entry name" value="Ribosomal_L21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036164">
        <property type="entry name" value="L21-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028909">
        <property type="entry name" value="L21p-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001787">
        <property type="entry name" value="Ribosomal_L21"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21349">
        <property type="entry name" value="PTHR21349"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00829">
        <property type="entry name" value="Ribosomal_L21p"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141091">
        <property type="entry name" value="SSF141091"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00061">
        <property type="entry name" value="L21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4 5" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4 5" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="4 5" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="4 5" id="KW-0699">rRNA-binding</keyword>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="106"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="117"/>
            <end position="136"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008563"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU000562"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ73646.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="198" mass="21003" checksum="2D97050894D7545A" modified="2015-12-09" version="1">MFAVIKTGGKQYKVAADDLLRVEKLDAEAGSTVTFDEVLMVGSETDTTVGAPTVEGASVVAEVVDQGRNRKIIIFKKRRRQNSRRRNGHRQAFTLVKVTDILTGGAKPAKKAAPKTAAPKAEAKEDAPAADAGADDLKKLDGAGPAAVKKLNEAGITNFAQIAAMSADDIARVEEETGLKGKFERGNWVEQAKELAGN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGZ1</accession>
    <name>A0A0M7AGZ1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Septal ring factor</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">envC_2</name>
        <name evidence="4" type="ORF">LAX5112_03620</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73676.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03620"/>
    <dbReference type="EnsemblBacteria" id="CTQ73676">
        <property type="protein sequence ID" value="CTQ73676"/>
        <property type="gene ID" value="LAX5112_03620"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.70.70.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011055">
        <property type="entry name" value="Dup_hybrid_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016047">
        <property type="entry name" value="Peptidase_M23"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01551">
        <property type="entry name" value="Peptidase_M23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51261">
        <property type="entry name" value="SSF51261"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="21"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_M23" evidence="3">
        <location>
            <begin position="344"/>
            <end position="446"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="185"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="248"/>
            <end position="289"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01551"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ73676.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="460" mass="50413" checksum="6EB8D208218FAD52" modified="2015-12-09" version="1">MRSDPGRGIRKRRWKQAGHPAFLSGLFACAFLWPMPGYVTETVDPSEVAVSSPEIEAAIEKKAKREQELAALTSDITVSSDRQAAIAREIQSLDRDRDTLNAKIINTADTIRGLETELTDTERRLRSLGENEDAVRLSLIARRDVLAEVLAALQRIGRRPPPALAVRPSDALSAVRSAILLNAVMPELRVETEALAADLEELQRLKTVIADEERRLRGDAMRLAEEKSRLELLLSAKRLEHTETVRSLEDEKRRAAELAARAGSLKELIANLESEIESARVAAEKSRQAALDQNRTLRGTDPFSDPGRLAPAIAFEDARGRLPQPVSGTVLKDYGQEDEFGGVTEGQSIATRPGSNVTSPADGWVVYSGPFRSYGQLLILNTGDGYHVLLAGMDRIDAELGQFVLAGEPVGVMGATQWASASTFGMGSTQPILYVEFRKDGRAVDPTPWWARTEEEKARG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AH08</accession>
    <name>A0A0M7AH08_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Cytochrome c556</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">LAX5112_03637</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="PTM">
        <text evidence="7">Binds 1 heme group per subunit.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73722.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672983.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ73722">
        <property type="protein sequence ID" value="CTQ73722"/>
        <property type="gene ID" value="LAX5112_03637"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010980">
        <property type="entry name" value="Cyt_c/b562"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002321">
        <property type="entry name" value="Cyt_c_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012127">
        <property type="entry name" value="Cyt_c_prime"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01322">
        <property type="entry name" value="Cytochrom_C_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000027">
        <property type="entry name" value="Cytc_c_prime"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47175">
        <property type="entry name" value="SSF47175"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51009">
        <property type="entry name" value="CYTCII"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0249">Electron transport</keyword>
    <keyword evidence="2 7" id="KW-0349">Heme</keyword>
    <keyword evidence="5 6" id="KW-0408">Iron</keyword>
    <keyword evidence="3 6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="8">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809440" evidence="8">
        <location>
            <begin position="22"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="binding site" description="covalent" evidence="7">
        <location>
            <position position="142"/>
        </location>
        <ligand>
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </ligand>
    </feature>
    <feature type="binding site" description="covalent" evidence="7">
        <location>
            <position position="145"/>
        </location>
        <ligand>
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </ligand>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="6">
        <location>
            <position position="146"/>
        </location>
        <ligand>
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR000027-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR000027-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ73722.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="153" mass="16247" checksum="E17252FDC5860408" modified="2015-12-09" version="1">MTVRKTAGISAVMLAVSVALAFAHGGATGIVKERMEAMEEISASMKQIGQMLRGQKPFDASEIVGAAGIIAGHSGDNLTRQFPSESLMPPTEASPLIWEKWEQFSGTANDMETAAMSVADAVQGGADRDQIATAFGRLAQTCKTCHETFRVKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHA3</accession>
    <name>A0A0M7AHA3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03732</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74027.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673062.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74027">
        <property type="protein sequence ID" value="CTQ74027"/>
        <property type="gene ID" value="LAX5112_03732"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="78"/>
            <end position="299"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="93"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="120"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="158"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="265"/>
            <end position="282"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74027.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="299" mass="29834" checksum="B02F96F5CFDD3D34" modified="2015-12-09" version="1">MYPLEGSKGESQNNLQIVRRAQALKDNDYMEHTRQTPLHDRLSAMVRRLSGVVAAALVFSCVYFSPLFDQKTTIAAVAESDSRGGGEGRGGGRGGSERGDRGGDDGNGRGGGGRGGSERGGSDGDNDSDSDSDGGRGGSDRGGSERGGSGRGGERGGSAADNDGDSDGDGGRGGSERGGGERGGGDQGGSDRGGSDRGGGDRGGNDSESEAQSDSGDNDNDGGNRGGSDAADGGRAPSDDDDADNQPEQSPAPAPAAQSPASPTKGLVPGRSQFQGNSAPGGEPLSASEEREAIERGWQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHC0</accession>
    <name>A0A0M7AHC0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03669</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73822.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673009.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03669"/>
    <dbReference type="EnsemblBacteria" id="CTQ73822">
        <property type="protein sequence ID" value="CTQ73822"/>
        <property type="gene ID" value="LAX5112_03669"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="152"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="175"/>
            <end position="189"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73822.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="806" mass="83440" checksum="5B9C4B02B8340BD8" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHH5</accession>
    <name>A0A0M7AHH5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Transport of quorum-sensing signal protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">tqsA_1</name>
        <name evidence="7" type="ORF">LAX5112_03902</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the autoinducer-2 exporter (AI-2E) (TC 2.A.86) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74558.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673206.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03902"/>
    <dbReference type="EnsemblBacteria" id="CTQ74558">
        <property type="protein sequence ID" value="CTQ74558"/>
        <property type="gene ID" value="LAX5112_03902"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002549">
        <property type="entry name" value="AI-2E-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21716">
        <property type="entry name" value="PTHR21716"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01594">
        <property type="entry name" value="AI-2E_transport"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="12"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="62"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="150"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="212"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="241"/>
            <end position="262"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="269"/>
            <end position="285"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="305"/>
            <end position="336"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009773"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ74558.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="371" mass="40020" checksum="6EEB42BBD026332F" modified="2015-12-09" version="1">MTLRRQIQFWLISLFAFCAFLYVFSGVLLPFVAGAAVAYLLDPVCDRLEKLGMGRLWATFTILLAFVFLLILFFILLLPVLGNQLASFLERFPELVRQLQGLVNDQMGQRLAEAAGINLADLQASMAEMVGQGAAFVGKLAQSVWSGGQALLSILSLFVITPVVAFYLLLDWDHMIAKIDGWLPRDHLEEIRGLAREMDGAVAGFVRGQLSVCLLLGAFYAIALAVAGLNFGLLIGMGAGLVSFIPFVGAGLGFIVSMGVGVVQFWPEWPMILVIGAIFAVGQFLEGNILQPKLVGNSTGLHPVTLMFALFAFGYLFGFVGMLIAVPAAAMIGVLARFALKQYLASPVYTGSRRLSKIGPEDTASQEGANE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIL4</accession>
    <name>A0A0M7AIL4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Benzoylformate decarboxylase</fullName>
            <ecNumber evidence="7">4.1.1.7</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">mdlC</name>
        <name evidence="7" type="ORF">LAX5112_03949</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the TPP enzyme family.</text>
    </comment>
    <dbReference type="EC" id="4.1.1.7" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74719.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673251.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03949"/>
    <dbReference type="EnsemblBacteria" id="CTQ74719">
        <property type="protein sequence ID" value="CTQ74719"/>
        <property type="gene ID" value="LAX5112_03949"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050695">
        <property type="term" value="F:benzoylformate decarboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030976">
        <property type="term" value="F:thiamine pyrophosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044281">
        <property type="term" value="P:small molecule metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029035">
        <property type="entry name" value="DHS-like_NAD/FAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029061">
        <property type="entry name" value="THDP-binding"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012000">
        <property type="entry name" value="Thiamin_PyroP_enz_cen_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012001">
        <property type="entry name" value="Thiamin_PyroP_enz_TPP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045229">
        <property type="entry name" value="TPP_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011766">
        <property type="entry name" value="TPP_enzyme-bd_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18968">
        <property type="entry name" value="PTHR18968"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02775">
        <property type="entry name" value="TPP_enzyme_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00205">
        <property type="entry name" value="TPP_enzyme_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02776">
        <property type="entry name" value="TPP_enzyme_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52467">
        <property type="entry name" value="SSF52467"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52518">
        <property type="entry name" value="SSF52518"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0456">Lyase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0786">Thiamine pyrophosphate</keyword>
    <feature type="domain" description="TPP_enzyme_N" evidence="6">
        <location>
            <begin position="29"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="domain" description="TPP_enzyme_M" evidence="4">
        <location>
            <begin position="229"/>
            <end position="352"/>
        </location>
    </feature>
    <feature type="domain" description="TPP_enzyme_C" evidence="5">
        <location>
            <begin position="437"/>
            <end position="580"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007812"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU362132"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00205"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF02775"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF02776"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ74719.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="585" mass="62598" checksum="3DD1344BFEC45BB2" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIP0</accession>
    <name>A0A0M7AIP0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03755</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74090.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03755"/>
    <dbReference type="EnsemblBacteria" id="CTQ74090">
        <property type="protein sequence ID" value="CTQ74090"/>
        <property type="gene ID" value="LAX5112_03755"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013879">
        <property type="entry name" value="DUF1761"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08570">
        <property type="entry name" value="DUF1761"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="49"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="76"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="116"/>
            <end position="136"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74090.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="137" mass="14636" checksum="D05E1C493C2DEF43" modified="2015-12-09" version="1">MMFDGINLLAAGGAAVASFIVGAIWYGVLGKAWMKAAGLTEEQTRPNPVTMVIAFLCQVVMAIVFAGIIYHTGEVTVRAGIISAIMVWIGIVMTTQIINHRFQSQPWALTAIDGGHWLLVLLVQAVVIGLLSPFVIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJJ6</accession>
    <name>A0A0M7AJJ6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04174</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75288.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673420.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75288">
        <property type="protein sequence ID" value="CTQ75288"/>
        <property type="gene ID" value="LAX5112_04174"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="48"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="100"/>
            <end position="122"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75288.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="156" mass="17028" checksum="E3631087A2A732D9" modified="2015-12-09" version="1">MSFGDPFGPFRPGIGPDIVQEPPVRRPDVFIEPHLRPRPPVLLRLRNLLKILGVFGGATGVLTVLFAVPVLISEFAAIETVGVHGKILTAPQFADRLENLLIGSFIVALSLVSFFASAAIASPRLGVRDHEREPYKFECGDGHETVHPTHAKVRHV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKU6</accession>
    <name>A0A0M7AKU6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Carbonic anhydrase</fullName>
            <ecNumber evidence="3">4.2.1.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">cynT</name>
        <name evidence="4" type="ORF">LAX5112_03998</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>H(+) + hydrogencarbonate = CO2 + H2O</text>
            <dbReference type="Rhea" id="RHEA:10748"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:17544"/>
            <dbReference type="EC" id="4.2.1.1"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the beta-class carbonic anhydrase family.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.1" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74840.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673290.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03998"/>
    <dbReference type="EnsemblBacteria" id="CTQ74840">
        <property type="protein sequence ID" value="CTQ74840"/>
        <property type="gene ID" value="LAX5112_03998"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004089">
        <property type="term" value="F:carbonate dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00884">
        <property type="entry name" value="beta_CA_cladeB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1050.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045066">
        <property type="entry name" value="Beta_CA_cladeB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001765">
        <property type="entry name" value="Carbonic_anhydrase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036874">
        <property type="entry name" value="Carbonic_anhydrase_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11002">
        <property type="entry name" value="PTHR11002"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00484">
        <property type="entry name" value="Pro_CA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00947">
        <property type="entry name" value="Pro_CA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53056">
        <property type="entry name" value="SSF53056"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0456">Lyase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006217"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012925"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ74840.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="224" mass="24490" checksum="2A76AD2E027583AD" modified="2015-12-09" version="1">MAFPSELLNGYSRYLRKGFLRDKEIQEHLAIYGQTPEVMVVSCCDSRVTPEGIFGAGPGELFVVRNVANLVPPFEATEGQHGTSAAIEYGVTGLHVKHIVVMGHCKCGGIQAFRESANQDHAQKGFIGRWIKLLEPAAISMACMPVDKIEDPQLAMEYAGVRQSLKNLMTFPFVKEAVDRGELQLHGAWFDIGSAELRVMDAATERFETADGPEALPIPTVAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AL73</accession>
    <name>A0A0M7AL73_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Pyrroline-5-carboxylate reductase</fullName>
            <shortName evidence="2">P5C reductase</shortName>
            <shortName evidence="2">P5CR</shortName>
            <ecNumber evidence="2">1.5.1.2</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="2">PCA reductase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="2 5" type="primary">proC</name>
        <name evidence="5" type="ORF">LAX5112_04141</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>L-proline + NAD(+) = 1-pyrroline-5-carboxylate + 2 H(+) + NADH</text>
            <dbReference type="Rhea" id="RHEA:14105"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15893"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:60039"/>
            <dbReference type="EC" id="1.5.1.2"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>L-proline + NADP(+) = 1-pyrroline-5-carboxylate + 2 H(+) + NADPH</text>
            <dbReference type="Rhea" id="RHEA:14109"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15893"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="ChEBI" id="CHEBI:60039"/>
            <dbReference type="EC" id="1.5.1.2"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Amino-acid biosynthesis; L-proline biosynthesis; L-proline from L-glutamate 5-semialdehyde: step 1/1.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the pyrroline-5-carboxylate reductase family.</text>
    </comment>
    <dbReference type="EC" id="1.5.1.2" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75192.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673397.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04141"/>
    <dbReference type="EnsemblBacteria" id="CTQ75192">
        <property type="protein sequence ID" value="CTQ75192"/>
        <property type="gene ID" value="LAX5112_04141"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00098">
        <property type="reaction ID" value="UER00361"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004735">
        <property type="term" value="F:pyrroline-5-carboxylate reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055129">
        <property type="term" value="P:L-proline biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01925">
        <property type="entry name" value="P5C_reductase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008927">
        <property type="entry name" value="6-PGluconate_DH-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028939">
        <property type="entry name" value="P5C_Rdtase_cat_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029036">
        <property type="entry name" value="P5CR_dimer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000304">
        <property type="entry name" value="Pyrroline-COOH_reductase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11645">
        <property type="entry name" value="PTHR11645"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03807">
        <property type="entry name" value="F420_oxidored"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14748">
        <property type="entry name" value="P5CR_dimer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000193">
        <property type="entry name" value="Pyrrol-5-carb_rd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48179">
        <property type="entry name" value="SSF48179"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00112">
        <property type="entry name" value="proC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2" id="KW-0521">NADP</keyword>
    <keyword evidence="2 5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-0641">Proline biosynthesis</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="F420_oxidored" evidence="3">
        <location>
            <begin position="11"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="domain" description="P5CR_dimer" evidence="4">
        <location>
            <begin position="165"/>
            <end position="270"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01925"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF03807"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF14748"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ75192.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="272" mass="28451" checksum="40DF3784E11B6723" modified="2015-12-09" version="1">MTFSKERPFVLVGAGKMGGAMLSGWMAEGIDPASILIVDPFLSPEIGALLKKHGIGHAAQMPDDVIASIILVAVKPQMMDDVLPGLVSACDASTLILSVAAGTPVRKFQEFFGDIPTARCMPNTPAMVKRGITAVYPTEKVTDEQKNTISQLLSAVGKVVWLESEDQIDLVTGVSGSGPAYVFYMTETLKEAGTAAGLPEELAEQLAIATVCGAGELMHQSGEDPAILRKNVTSPNGTTAAALDVLMSERGIQPIMTEAVAAAVKRAKELAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALR4</accession>
    <name>A0A0M7ALR4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 12">Phosphoribosylformylglycinamidine cyclo-ligase</fullName>
            <ecNumber evidence="3 12">6.3.3.1</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10 12">AIR synthase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="11 12">AIRS</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="9 12">Phosphoribosyl-aminoimidazole synthetase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="12 15" type="primary">purM</name>
        <name evidence="15" type="ORF">LAX5112_03901</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="8 12">
            <text>2-formamido-N(1)-(5-O-phospho-beta-D-ribosyl)acetamidine + ATP = 5-amino-1-(5-phospho-beta-D-ribosyl)imidazole + ADP + H(+) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:23032"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:137981"/>
            <dbReference type="ChEBI" id="CHEBI:147287"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.3.1"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1 12">Purine metabolism; IMP biosynthesis via de novo pathway; 5-amino-1-(5-phospho-D-ribosyl)imidazole from N(2)-formyl-N(1)-(5-phospho-D-ribosyl)glycinamide: step 2/2.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="12">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 12">Belongs to the AIR synthase family.</text>
    </comment>
    <dbReference type="EC" id="6.3.3.1" evidence="3 12"/>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74554.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673205.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03901"/>
    <dbReference type="EnsemblBacteria" id="CTQ74554">
        <property type="protein sequence ID" value="CTQ74554"/>
        <property type="gene ID" value="LAX5112_03901"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00074">
        <property type="reaction ID" value="UER00129"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004641">
        <property type="term" value="F:phosphoribosylformylglycinamidine cyclo-ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006189">
        <property type="term" value="P:'de novo' IMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd02196">
        <property type="entry name" value="PurM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.650.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00741">
        <property type="entry name" value="AIRS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010918">
        <property type="entry name" value="PurM-like_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036676">
        <property type="entry name" value="PurM-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016188">
        <property type="entry name" value="PurM-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036921">
        <property type="entry name" value="PurM-like_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004733">
        <property type="entry name" value="PurM_cligase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10520">
        <property type="entry name" value="PTHR10520"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00586">
        <property type="entry name" value="AIRS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02769">
        <property type="entry name" value="AIRS_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55326">
        <property type="entry name" value="SSF55326"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56042">
        <property type="entry name" value="SSF56042"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00878">
        <property type="entry name" value="purM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 12" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="12" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 12 15" id="KW-0436">Ligase</keyword>
    <keyword evidence="6 12" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-0658">Purine biosynthesis</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AIRS" evidence="13">
        <location>
            <begin position="66"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="domain" description="AIRS_C" evidence="14">
        <location>
            <begin position="183"/>
            <end position="346"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004686"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010280"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00013047"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00020367"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023392"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00031908"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00032931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00033093"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF00586"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF02769"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="CTQ74554.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="358" mass="36312" checksum="AE57756E9A390E72" modified="2015-12-09" version="1">MSQSSSSGSNGLTYADAGVDIDAGNALVDRIKPLVKATSRPGADSDIGGFGGLFDLKGAGFTDPVLVAANDGVGTKLKIAIETGQHRTVGIDLVAMCVNDLIVQGAEPLFFLDYFATGALDVDTATDVVAGIADGCKMAGAALIGGETAEMPGMYAAGDYDLAGFSVGAVERGEILPRKGVAEGDVLLGLTSSGVHSNGYSMVRKIVELTGLEWSAPAPFADGKTLGEALMVPTKIYVKPLLSALNETSGIKALAHITGGGLPENLPRVLPKGSSARIDLSKVSVPPVFSWLAEKGGVAEAEMLRTFNCGIGMVVVVASDEAAAVSAALETAGETVVEIGQIETAGGSPVLFDGALKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALS2</accession>
    <name>A0A0M7ALS2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">1,2-epoxyphenylacetyl-CoA isomerase</fullName>
            <ecNumber evidence="3">5.3.3.18</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">paaG_4</name>
        <name evidence="3" type="ORF">LAX5112_04457</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the enoyl-CoA hydratase/isomerase family.</text>
    </comment>
    <dbReference type="EC" id="5.3.3.18" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ76075.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673662.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000024.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04457"/>
    <dbReference type="EnsemblBacteria" id="CTQ76075">
        <property type="protein sequence ID" value="CTQ76075"/>
        <property type="gene ID" value="LAX5112_04457"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.12.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029045">
        <property type="entry name" value="ClpP/crotonase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018376">
        <property type="entry name" value="Enoyl-CoA_hyd/isom_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001753">
        <property type="entry name" value="Enoyl-CoA_hydra/iso"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014748">
        <property type="entry name" value="Enoyl-CoA_hydra_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00378">
        <property type="entry name" value="ECH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52096">
        <property type="entry name" value="SSF52096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00166">
        <property type="entry name" value="ENOYL_COA_HYDRATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0413">Isomerase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005254"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU003707"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ76075.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="259" mass="27207" checksum="5C0FEAD11D8C4F5D" modified="2015-12-09" version="1">MSDLLVKRDSGVLSLTLNRPDRLNALSTDMREGMLSELLSELHAPSVRAVLITGAGRGFCSGADLDLETILARRQHIETQILGGINRVVQALRDLPVPVIAAVNGPAAGAGFSIVLASDIVIAAQSAKFHLSFARIGAVLDGGASSLLTHRIGASRTTALAMLGGSMEAETAKDWGLVHEVTEDDSVLDTATALTQRLASGPTVALGLIKREIAAAQSASLDESLRLEAACQSKAFNTQDFEEGVRAFGESRKPNFLGH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALW8</accession>
    <name>A0A0M7ALW8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03965</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74763.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673263.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74763">
        <property type="protein sequence ID" value="CTQ74763"/>
        <property type="gene ID" value="LAX5112_03965"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74763.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="123" mass="13110" checksum="D86293FC44BA66B7" modified="2015-12-09" version="1">MEAVDEDEVADDAALDGRVGDDEELVVGDVFESAGLDDPDAPDAVEDGDLSLTFSGFRSIVTGRFDPDDPELEAVLPGFADEPDPLPSDEDVPPGVLLSLAIYLSPAPSQSQDLNYTRLFAKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANV4</accession>
    <name>A0A0M7ANV4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04176</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75294.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008189644.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04176"/>
    <dbReference type="EnsemblBacteria" id="CTQ75294">
        <property type="protein sequence ID" value="CTQ75294"/>
        <property type="gene ID" value="LAX5112_04176"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018687">
        <property type="entry name" value="DUF2177_membr"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09945">
        <property type="entry name" value="DUF2177"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="44"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="73"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="103"/>
            <end position="128"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75294.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="134" mass="14853" checksum="E9CB95E62479B99F" modified="2015-12-09" version="1">MVHFITAYFTTAIVFLAIDYVWLTQVATRFYFDRIGHLLMERPNMGAAAAFYLIYVVGIVLFAVGPALKNESFSYAVMYGAMFGFFTYATYDVTNYATLRDWPVIVAVVDIAWGTVLGAVSAGAGYLISRQILG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AP61</accession>
    <name>A0A0M7AP61_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Aminopeptidase N</fullName>
            <ecNumber evidence="3">3.4.11.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">pepN_2</name>
        <name evidence="3" type="ORF">LAX5112_04216</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.4.11.2" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75404.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673456.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000021.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04216"/>
    <dbReference type="EnsemblBacteria" id="CTQ75404">
        <property type="protein sequence ID" value="CTQ75404"/>
        <property type="gene ID" value="LAX5112_04216"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004177">
        <property type="term" value="F:aminopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008237">
        <property type="term" value="F:metallopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.390.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014782">
        <property type="entry name" value="Peptidase_M1_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027268">
        <property type="entry name" value="Peptidase_M4/M1_CTD_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01433">
        <property type="entry name" value="Peptidase_M1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0031">Aminopeptidase</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0645">Protease</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809569" evidence="1">
        <location>
            <begin position="22"/>
            <end position="667"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_M1" evidence="2">
        <location>
            <begin position="279"/>
            <end position="420"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01433"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ75404.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="667" mass="72208" checksum="5DC97F1F28209715" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQ35</accession>
    <name>A0A0M7AQ35_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Macrolide-specific efflux protein MacA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">macA</name>
        <name evidence="5" type="ORF">LAX5112_04622</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000027">
        <property type="protein sequence ID" value="CTQ76526.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673809.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000027.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04622"/>
    <dbReference type="EnsemblBacteria" id="CTQ76526">
        <property type="protein sequence ID" value="CTQ76526"/>
        <property type="gene ID" value="LAX5112_04622"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032317">
        <property type="entry name" value="HlyD_D23"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006143">
        <property type="entry name" value="RND_pump_MFP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16576">
        <property type="entry name" value="HlyD_D23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01730">
        <property type="entry name" value="RND_mfp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="20"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="domain" description="HlyD_D23" evidence="4">
        <location>
            <begin position="63"/>
            <end position="312"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="111"/>
            <end position="190"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF16576"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ76526.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="415" mass="44835" checksum="70FCE3E452DC115E" modified="2015-12-09" version="1">MDDEQEEIKRQLGLAKRKRALSKMWLMIMITVFGLGGGLVVSRADRGAGETKLRTETIARGDLKVTISATGSVEPTDTVDVSSELSGTISAVAVDFNDQVKAGDVLARLDTSKLEAMKKVQEANLRAAEARLVKAQVNLEEAREEAQRARTLKDRNVSSALQVITADAAFERMKADVEIARADIARERANLAVTAEDLSDACLRSPVDGVVLERKVNQGQTVAASMSAPVLFTIAESLNEMELQLSIDEADIGRLREAQRATFTVDAYPAREFHAQVKTVRFAPEVIDNVVTYLASLEVGNPDLVLRPGMTASADILVNEVADALLVPNAALRFVPDPTGSADEEPTGSSGMFGLLFSDQPSMVTPRPTTNTLWVLRDNGMQEIEIVRGDTNGRYTEILGGDVQPGDQVIVGVEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARB3</accession>
    <name>A0A0M7ARB3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Tetrathionate reductase electron transport protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ttrB</name>
        <name evidence="5" type="ORF">LAX5112_04475</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ76124.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673673.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000024.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04475"/>
    <dbReference type="EnsemblBacteria" id="CTQ76124">
        <property type="protein sequence ID" value="CTQ76124"/>
        <property type="gene ID" value="LAX5112_04475"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017896">
        <property type="entry name" value="4Fe4S_Fe-S-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017900">
        <property type="entry name" value="4Fe4S_Fe_S_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13247">
        <property type="entry name" value="Fer4_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12800">
        <property type="entry name" value="Fer4_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00198">
        <property type="entry name" value="4FE4S_FER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51379">
        <property type="entry name" value="4FE4S_FER_2"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0408">Iron</keyword>
    <keyword evidence="3" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="4">
        <location>
            <begin position="12"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="4">
        <location>
            <begin position="72"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="4">
        <location>
            <begin position="106"/>
            <end position="135"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51379"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ76124.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="248" mass="26966" checksum="A3ACE43E4D8C137F" modified="2015-12-09" version="1">MTQLPETTDKKLGLVIDLDTCVGCHACVTACKGWNTENYGAPLSDMDAYGKDPVGSFLNRIHSFEVQPENGPAQTIHFPKSCLHCDDAPCVTVCPTGASYKRREDGIVLVNEDACIGCGLCAWACPYGARELDQAEGVMKKCTLCVDRIYNENLEEVDRVPACVRTCPAGARHFGDLGDPDSDVSRLVAERGGFDLMPEQGTKPVNKYLPPRPKDRLAEVSAGSDTMQPVAETPKGFLRWLDKALEAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARD4</accession>
    <name>A0A0M7ARD4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">ASPIC and UnbV</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_04485</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ76144.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673682.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000024.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04485"/>
    <dbReference type="EnsemblBacteria" id="CTQ76144">
        <property type="protein sequence ID" value="CTQ76144"/>
        <property type="gene ID" value="LAX5112_04485"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.130">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013517">
        <property type="entry name" value="FG-GAP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028994">
        <property type="entry name" value="Integrin_alpha_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011519">
        <property type="entry name" value="UnbV_ASPIC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13517">
        <property type="entry name" value="FG-GAP_3"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07593">
        <property type="entry name" value="UnbV_ASPIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69318">
        <property type="entry name" value="SSF69318"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809674" evidence="2">
        <location>
            <begin position="26"/>
            <end position="553"/>
        </location>
    </feature>
    <feature type="domain" description="UnbV_ASPIC" evidence="3">
        <location>
            <begin position="473"/>
            <end position="532"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF07593"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ76144.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="553" mass="60262" checksum="17291E8315941FDA" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASQ0</accession>
    <name>A0A0M7ASQ0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Serine/threonine-protein kinase pkn1</fullName>
            <ecNumber evidence="2">2.7.11.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">pkn1_2</name>
        <name evidence="2" type="ORF">LAX5112_04940</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.7.11.1" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000036">
        <property type="protein sequence ID" value="CTQ77531.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04940"/>
    <dbReference type="EnsemblBacteria" id="CTQ77531">
        <property type="protein sequence ID" value="CTQ77531"/>
        <property type="gene ID" value="LAX5112_04940"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004674">
        <property type="term" value="F:protein serine/threonine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1580.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016187">
        <property type="entry name" value="CTDL_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005532">
        <property type="entry name" value="SUMF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042095">
        <property type="entry name" value="SUMF_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03781">
        <property type="entry name" value="FGE-sulfatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56436">
        <property type="entry name" value="SSF56436"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="FGE-sulfatase" evidence="1">
        <location>
            <begin position="43"/>
            <end position="333"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03781"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77531.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="337" mass="36599" checksum="F1720DAD7CB84A56" modified="2015-12-09" version="1">MFRIETHAISLVRRGLMAALIVAASVLIGATVALAESHGFAGLEGGTFAMGSGKHYREEAPVRQVTLQPFSIQKTEVTNAEFAAFVEDTGYVTTAEKDLDQSDYPGLPPDLLKAGSMVFAQPKDPVALNDINLWWRYVPGAQWRHPRGPESSIEGLEDHPVVQVSIEDAKAYAAWAGGRLPTEAEWEYAARGGLDGAQFSWGEDYDPSEGWKANTWQGVFPSIDTAEDGHHGSAPVGSYASNGYGLYDMAGNVWEYVSDWWIPGHPTKDQTNPGGPSKTLAEQFANSAVGARHVVKGGSWLCAPSYCFRYRPSARQPAERSLGSNHIGFRIVRDGVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASV8</accession>
    <name>A0A0M7ASV8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04945</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000036">
        <property type="protein sequence ID" value="CTQ77542.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674086.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000036.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04945"/>
    <dbReference type="EnsemblBacteria" id="CTQ77542">
        <property type="protein sequence ID" value="CTQ77542"/>
        <property type="gene ID" value="LAX5112_04945"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809588" evidence="1">
        <location>
            <begin position="30"/>
            <end position="277"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77542.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="277" mass="30091" checksum="4A26CED9F859B157" modified="2015-12-09" version="1">MTFHKMKSKTAKLCIGTLVSCVLPATVLAADLPQAPAPETVAVNERVNKTWEFVLAPYFVGANITGTSQVGRLPSTDIDIGSSDILSNLRFGFMGRAEALYQQKFGAMLDVAYMNLANSNDALLPGGRIRVSGDQLIVEGFLFYRAYNTSKSSIDLYAGGRYWDINLNLNRTGTVAGNFDISRGANWIDPVIGVRGMHQINDKWSVNGRGDIGGFGAASDFTWNVQAGIGYHFNQIWSTHLQYKALGVDYSNGKSGIDSFAYDTVTHGPLLGVVARF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ATT4</accession>
    <name>A0A0M7ATT4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04831</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000032">
        <property type="protein sequence ID" value="CTQ77193.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673986.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000032.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04831"/>
    <dbReference type="EnsemblBacteria" id="CTQ77193">
        <property type="protein sequence ID" value="CTQ77193"/>
        <property type="gene ID" value="LAX5112_04831"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009562">
        <property type="entry name" value="DUF1178"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06676">
        <property type="entry name" value="DUF1178"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF032131">
        <property type="entry name" value="UCP032131"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="69"/>
            <end position="99"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77193.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="174" mass="19154" checksum="0EEA34991420315B" modified="2015-12-09" version="1">MIKYTLVCDTPHTFEGWFRNSEDFDVQCGRGLVTCPVCNSTDIKKGLMAPAVSTSRKKDAMVVPQMPSADVIETQSAPEPAPAKPESGKSQTSALLPNDVRQKEIVEALRLVRAKMTENSENVGTKFASEARKIHYGESEERNIYGETSPKEAMDLIDEGISVLPLPELPDEKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AUB1</accession>
    <name>A0A0M7AUB1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Ubiquinone biosynthesis O-methyltransferase</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="1">2-polyprenyl-6-hydroxyphenol methylase</fullName>
            <ecNumber evidence="1">2.1.1.222</ecNumber>
        </alternativeName>
        <alternativeName>
            <fullName evidence="1">3-demethylubiquinone 3-O-methyltransferase</fullName>
            <ecNumber evidence="1">2.1.1.64</ecNumber>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="1 2" type="primary">ubiG</name>
        <name evidence="2" type="ORF">LAX5112_04828</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>a 3-(all-trans-polyprenyl)benzene-1,2-diol + S-adenosyl-L-methionine = a 2-methoxy-6-(all-trans-polyprenyl)phenol + H(+) + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:31411"/>
            <dbReference type="Rhea" id="RHEA-COMP:9550"/>
            <dbReference type="Rhea" id="RHEA-COMP:9551"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:62729"/>
            <dbReference type="ChEBI" id="CHEBI:62731"/>
            <dbReference type="EC" id="2.1.1.222"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>a 3-demethylubiquinol + S-adenosyl-L-methionine = a ubiquinol + H(+) + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:44380"/>
            <dbReference type="Rhea" id="RHEA-COMP:9566"/>
            <dbReference type="Rhea" id="RHEA-COMP:10914"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17976"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:84422"/>
            <dbReference type="EC" id="2.1.1.64"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1">Cofactor biosynthesis; ubiquinone biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the methyltransferase superfamily. UbiG/COQ3 family.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.222" evidence="1"/>
    <dbReference type="EC" id="2.1.1.64" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000032">
        <property type="protein sequence ID" value="CTQ77184.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04828"/>
    <dbReference type="EnsemblBacteria" id="CTQ77184">
        <property type="protein sequence ID" value="CTQ77184"/>
        <property type="gene ID" value="LAX5112_04828"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00232"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102208">
        <property type="term" value="F:2-polyprenyl-6-hydroxyphenol methylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008425">
        <property type="term" value="F:2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008689">
        <property type="term" value="F:3-demethylubiquinone-9 3-O-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006744">
        <property type="term" value="P:ubiquinone biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00472">
        <property type="entry name" value="UbiG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010233">
        <property type="entry name" value="UbiG_MeTrfase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01983">
        <property type="entry name" value="UbiG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="1 2" id="KW-0808">Transferase</keyword>
    <keyword evidence="2" id="KW-0830">Ubiquinone</keyword>
    <keyword evidence="1" id="KW-0831">Ubiquinone biosynthesis</keyword>
    <feature type="binding site" evidence="1">
        <location>
            <position position="59"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="90"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="111"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="154"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00472"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77184.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="268" mass="29418" checksum="C8AD638838FB7F40" modified="2015-12-09" version="1">MYGVALFGTPMKGLHMTSTAQKTNGTIDSDEVARFSALADQWWDPTGKFKPLHKFNPVRLSYIKQEVCRQFDRDPNSPDAFKGLRFLDIGCGGGLLSEPMARLGADVVGADASETNIEVAKLHMQSSGLDIDYRAETAEALAEAGEKFDVVLNMEVVEHVADVTLFLNATSQMVRPGGLMFVATINRTLKAYALAIVGAEYVLRWLPKGTHSYEKLVKPSEIESPLNAAGLTIIDRSGVSFNPITDTWARSRDMDVNYMLLAERPKAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AUZ0</accession>
    <name>A0A0M7AUZ0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04974</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000037">
        <property type="protein sequence ID" value="CTQ77603.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77603">
        <property type="protein sequence ID" value="CTQ77603"/>
        <property type="gene ID" value="LAX5112_04974"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="29"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="31"/>
            <end position="47"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77603.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="55" mass="6444" checksum="B59EEC4E602D59D0" modified="2015-12-09" version="1">MSKKHIQPNAQDLMIQAMNNQQTWFKSLFSDHPKGRNRPEKATAERYLLHSGHLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZLI5</accession>
    <name>A0A0M6ZLI5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Aminomethyltransferase</fullName>
            <ecNumber evidence="6">2.1.2.10</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">gcvT_1</name>
        <name evidence="6" type="ORF">LAX5112_00010</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the GcvT family.</text>
    </comment>
    <dbReference type="EC" id="2.1.2.10" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63629.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670078.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00010"/>
    <dbReference type="EnsemblBacteria" id="CTQ63629">
        <property type="protein sequence ID" value="CTQ63629"/>
        <property type="gene ID" value="LAX5112_00010"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004047">
        <property type="term" value="F:aminomethyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1360.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006076">
        <property type="entry name" value="FAD-dep_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032503">
        <property type="entry name" value="FAO_M"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028896">
        <property type="entry name" value="GCST/YgfZ/DmdA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013977">
        <property type="entry name" value="GCV_T_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006222">
        <property type="entry name" value="GCV_T_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029043">
        <property type="entry name" value="GcvT/YgfZ_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027266">
        <property type="entry name" value="TrmE/GcvT_dom1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43757">
        <property type="entry name" value="PTHR43757"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01266">
        <property type="entry name" value="DAO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16350">
        <property type="entry name" value="FAO_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01571">
        <property type="entry name" value="GCV_T"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08669">
        <property type="entry name" value="GCV_T_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101790">
        <property type="entry name" value="SSF101790"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="DAO" evidence="2">
        <location>
            <begin position="10"/>
            <end position="382"/>
        </location>
    </feature>
    <feature type="domain" description="FAO_M" evidence="5">
        <location>
            <begin position="385"/>
            <end position="441"/>
        </location>
    </feature>
    <feature type="domain" description="GCV_T" evidence="3">
        <location>
            <begin position="443"/>
            <end position="722"/>
        </location>
    </feature>
    <feature type="domain" description="GCV_T_C" evidence="4">
        <location>
            <begin position="779"/>
            <end position="836"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008609"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01266"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01571"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF08669"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF16350"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ63629.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="853" mass="95107" checksum="900222956B4FBB31" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZMR6</accession>
    <name>A0A0M6ZMR6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Benzoate 1,2-dioxygenase electron transfer component</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">benC_1</name>
        <name evidence="9" type="ORF">LAX5112_00018</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63647.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670083.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ63647">
        <property type="protein sequence ID" value="CTQ63647"/>
        <property type="gene ID" value="LAX5112_00018"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051213">
        <property type="term" value="F:dioxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013112">
        <property type="entry name" value="FAD-bd_8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017927">
        <property type="entry name" value="FAD-bd_FR_type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013130">
        <property type="entry name" value="Fe3_Rdtase_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039261">
        <property type="entry name" value="FNR_nucleotide-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001433">
        <property type="entry name" value="OxRdtase_FAD/NAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000951">
        <property type="entry name" value="Ph_dOase_redase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017938">
        <property type="entry name" value="Riboflavin_synthase-like_b-brl"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08022">
        <property type="entry name" value="FAD_binding_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01794">
        <property type="entry name" value="Ferric_reduct"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00175">
        <property type="entry name" value="NAD_binding_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00409">
        <property type="entry name" value="PHDIOXRDTASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52343">
        <property type="entry name" value="SSF52343"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63380">
        <property type="entry name" value="SSF63380"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51384">
        <property type="entry name" value="FAD_FR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="9" id="KW-0223">Dioxygenase</keyword>
    <keyword evidence="5" id="KW-0408">Iron</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="35"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="74"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="111"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="139"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="164"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="domain" description="FAD-binding FR-type" evidence="8">
        <location>
            <begin position="190"/>
            <end position="289"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51384"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ63647.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="447" mass="49382" checksum="5B5EDD0996C89E7B" modified="2015-12-09" version="1">MRPLGLALIALAVLIPVYWFAPIASERDPVALFSQYLGAAALILMGINQFVATRAPGLEIVFGPLDRIYVLHKWLGVIALIAMGLHDIIDADMNGLRGGVLSGIAEDIGEISLYGLMILILASVITFIPYHLWKWSHRIIGVFFFLGAFHFFFIAKPFSNFDPLGLYASAFCILGIVSYIWMSVVRPMAPRGHRYEVDLVRRVGGLTELVLLPKGGGMRHKPGQFAFLSIDGGGLGEEHPFTLSGAPTDDRVLRFSIKDLGDYTDRLQRMVQPGMDAIVSGPFGHFSMPSGRDPQVWVGAGVGITPFLAFAESLKDRETGPVKLYYCVRERDDIPYAVELERLAEEVATLELIIVNSAEGIRLTSDRIVSDLGGDVANAHVFFCGPVPMRKALKSGLLLKGLKASRFRFEEFEMRTGIGLQALAVWLWDRGKYEVVKRVSRQTEPAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZN62</accession>
    <name>A0A0M6ZN62_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Nodulation protein D 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">nodD2</name>
        <name evidence="3" type="ORF">LAX5112_00024</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63662.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670087.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ63662">
        <property type="protein sequence ID" value="CTQ63662"/>
        <property type="gene ID" value="LAX5112_00024"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd08417">
        <property type="entry name" value="PBP2_Nitroaromatics_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037402">
        <property type="entry name" value="YidZ_PBP2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="63"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ63662.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="299" mass="32731" checksum="33AB293C9AAA5190" modified="2015-12-09" version="1">MDIKQTELGLLLALHALLDHENVSLAAKQIGVTQPAMSAQLKRLRDLFNDPLLVPSGRRLVATTRARALQDELHAHLQGLNALVRDHTVFDPASSETTFRLIGTDYVHAVLAAPLQMMLAAEAPNARVAFLAFDPKTLWSSLEAETADLALATGMSLPEAKRQSALTEDFQVIMSRTHPLVGQPMTLERFCAFPHILVSPEGGGFIGATDRVLKKTGHKRRVAISLPSFLLAPALVSSSDALCMMPSRLAKLHEGNVACTPSPFPSPGFDVDLLWHPRRQNDPAHKWFRAEVRRLAQGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZNB8</accession>
    <name>A0A0M6ZNB8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Bacilysin biosynthesis oxidoreductase YwfH</fullName>
            <ecNumber evidence="1">1.-.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">ywfH_1</name>
        <name evidence="1" type="ORF">LAX5112_00026</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.-.-.-" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63666.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670089.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ63666">
        <property type="protein sequence ID" value="CTQ63666"/>
        <property type="gene ID" value="LAX5112_00026"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ63666.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="244" mass="25425" checksum="FC158F37E0B85077" modified="2015-12-09" version="1">MSSFEGKRVAVVGGGSGIGRAVAESALKQGADVIISSRDAAKLESVAESRTGMTVLPLDMTDATSIAAWADRLGPIDHLVISASSAAHGAFSDLEEDPLRAMFDAKFFGPYLTAKAALPYLRDGGSITFFSGVLSRRPGMNCSGLGAVNGAVESLTYGLALELGPRFRVNCVSPGMIRSDAYAAVPEAAREEMYAATGESLPLGRVGTVDEAAEAALFLMANTFTSGHVLDVDGGHMIRQYATR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZNF5</accession>
    <name>A0A0M6ZNF5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Bacterial extracellular solute-binding proteins, family 3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_00250</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64305.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670237.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00250"/>
    <dbReference type="EnsemblBacteria" id="CTQ64305">
        <property type="protein sequence ID" value="CTQ64305"/>
        <property type="gene ID" value="LAX5112_00250"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809154" evidence="2">
        <location>
            <begin position="24"/>
            <end position="247"/>
        </location>
    </feature>
    <feature type="domain" description="PBPb" evidence="3">
        <location>
            <begin position="33"/>
            <end position="213"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00497"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ64305.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="247" mass="27467" checksum="0DB4FC58428A7B55" modified="2015-12-09" version="1">MAFIKAFALFAMATLSAAVSAHAETWRISALDWPPYSSPQEKDGGNAVAALRASLAKIGVTLEIDYMSFPRAKALAKSGRYIGYFPAWPEEIIEGFKGSRPIMMSQVGVVHRQDSSVSWRNTHDLFDNYPVGYVRSFVYPVEIQEEVEHHATTATGVDTEQDLVRMLAAGRIEVAVTDPSVMLRVSEKMGITGLVANKYILFRKPLVLAFSGERDNVSRRVRLNNVLPQFSRNQLTCCAYHPPAKQN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZNG3</accession>
    <name>A0A0M6ZNG3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Aliphatic sulfonates import ATP-binding protein SsuB</fullName>
            <ecNumber evidence="6">3.6.3.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">ssuB_1</name>
        <name evidence="6" type="ORF">LAX5112_00255</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.-" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64319.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00255"/>
    <dbReference type="EnsemblBacteria" id="CTQ64319">
        <property type="protein sequence ID" value="CTQ64319"/>
        <property type="gene ID" value="LAX5112_00255"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="23"/>
            <end position="256"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="59"/>
            <end position="66"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ64319.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="277" mass="30956" checksum="727EEEAFAEA4AB69" modified="2015-12-09" version="1">MLTAAEIEDGLEDAMSSQANRVIDIDNLSLTFETNDGPVHALSDIDLKIEEGDFVSFIGPSGCGKTTLLRVIADLERPTAGSISVNGVSPEEARLNRAYGYVFQAAALYPWRTIAKNVALPLEIMGLSREEQQQRIQKNMELVNLTGFEKKYPWQLSGGMQQRASIARALAVEPDLLLMDEPFGALDEIVRDHLNEQLLQLWAKTNKTVVFVTHSIPEAVFLSTKIVVLCPRPGRIYDVIESDLPRERNLDIRETPEFLKIAHRVREGLKAGHSYED</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZNP1</accession>
    <name>A0A0M6ZNP1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">YrhK domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_00131</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63967.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00131"/>
    <dbReference type="EnsemblBacteria" id="CTQ63967">
        <property type="protein sequence ID" value="CTQ63967"/>
        <property type="gene ID" value="LAX5112_00131"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025424">
        <property type="entry name" value="YrhK_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14145">
        <property type="entry name" value="YrhK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="29"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="53"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="domain" description="YrhK" evidence="2">
        <location>
            <begin position="22"/>
            <end position="74"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF14145"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ63967.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="102" mass="11707" checksum="11F1C90F895CD1C3" modified="2015-12-09" version="1">MSKLFDHSLRSASPDHAEIVRKYELYRTIVEFLAALMFVIGSIFFFYESLLYAGTWLFLIGSILFGVRPTIRLLLELKLANLPVPKEFRPYGAPPVDEPVSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZNS5</accession>
    <name>A0A0M6ZNS5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">General L-amino acid-binding periplasmic protein AapJ</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">aapJ_1</name>
        <name evidence="4" type="ORF">LAX5112_00102</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63882.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670139.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00102"/>
    <dbReference type="EnsemblBacteria" id="CTQ63882">
        <property type="protein sequence ID" value="CTQ63882"/>
        <property type="gene ID" value="LAX5112_00102"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00062">
        <property type="entry name" value="PBPb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809162" evidence="2">
        <location>
            <begin position="24"/>
            <end position="338"/>
        </location>
    </feature>
    <feature type="domain" description="PBPb" evidence="3">
        <location>
            <begin position="34"/>
            <end position="263"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00062"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ63882.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="338" mass="36160" checksum="161FE468E0796E40" modified="2015-12-09" version="1">MKNTFKSLAVAAAFSGAAFPASASTLERVKENGYFTCGVSQGNPGFSNPDSDGNWSGLDVDYCRAIAAAVLGDPAAVKFRPLSSPERFTALQSGEIDVLSRTTTWTMSRDTNLGANFAGVMYYDGQAMMVRKELGITSAMELAGASVCTATGTTTELNVADFFRVNNMEYEVVAFEKNDEVTQAYDAGRCDVYTTDKSGLHANRLKLTNSSEHMILPEVISKEPLGPVVRQGDDQWLNIAKWTLNVLINAEELGVTQANAADMASSDNPAVKRLLGVEGNFGGALGLDQDWAVRIISAVGNYGEIFARNVGVDTPLGIERGLNASWIDGGILYAPPVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZNV1</accession>
    <name>A0A0M6ZNV1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Pyridoxamine 5'-phosphate oxidase, FMN-binding family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00066</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63790.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008189174.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00066"/>
    <dbReference type="EnsemblBacteria" id="CTQ63790">
        <property type="protein sequence ID" value="CTQ63790"/>
        <property type="gene ID" value="LAX5112_00066"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024029">
        <property type="entry name" value="Pyridox_Oxase_FMN-dep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011576">
        <property type="entry name" value="Pyridox_Oxase_put"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012349">
        <property type="entry name" value="Split_barrel_FMN-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01243">
        <property type="entry name" value="Putative_PNPOx"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR04025">
        <property type="entry name" value="PPOX_FMN_DR2398"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Putative_PNPOx" evidence="1">
        <location>
            <begin position="29"/>
            <end position="120"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01243"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ63790.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="202" mass="22622" checksum="FCBDBD192BC74AED" modified="2015-12-09" version="1">MTVLKTIDELEKHYGPVGEASLIKVTDHLTSAYRQIVEKSCFCTLSTVGPEGLDCSPRGDAGPVVRIKDPRTLLMPDRRGNNRIDSLRNIIRDPRVSLMFMIPGWNNVLRINGHAVISVDPAQLASFVMEGKEPRSVIEITIEEAYFQCARALMRADLWNTESQIAKGDLPTPGQIMQEIKDSFDGSTYDADWLQRAKGSMW</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZP76</accession>
    <name>A0A0M6ZP76_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Indole-3-glycerol phosphate synthase</fullName>
            <shortName evidence="8">IGPS</shortName>
            <ecNumber evidence="8">4.1.1.48</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8 10" type="primary">trpC</name>
        <name evidence="10" type="ORF">LAX5112_00198</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 8">
            <text>1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate + H(+) = (1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate + CO2 + H2O</text>
            <dbReference type="Rhea" id="RHEA:23476"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:58613"/>
            <dbReference type="ChEBI" id="CHEBI:58866"/>
            <dbReference type="EC" id="4.1.1.48"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 8">Amino-acid biosynthesis; L-tryptophan biosynthesis; L-tryptophan from chorismate: step 4/5.</text>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the TrpC family.</text>
    </comment>
    <dbReference type="EC" id="4.1.1.48" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64157.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670199.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00198"/>
    <dbReference type="EnsemblBacteria" id="CTQ64157">
        <property type="protein sequence ID" value="CTQ64157"/>
        <property type="gene ID" value="LAX5112_00198"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00035">
        <property type="reaction ID" value="UER00043"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004425">
        <property type="term" value="F:indole-3-glycerol-phosphate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000162">
        <property type="term" value="P:tryptophan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00331">
        <property type="entry name" value="IGPS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00134_B">
        <property type="entry name" value="IGPS_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045186">
        <property type="entry name" value="Indole-3-glycerol_P_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013798">
        <property type="entry name" value="Indole-3-glycerol_P_synth_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001468">
        <property type="entry name" value="Indole-3-GlycerolPSynthase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011060">
        <property type="entry name" value="RibuloseP-bd_barrel"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22854">
        <property type="entry name" value="PTHR22854"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00218">
        <property type="entry name" value="IGPS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51366">
        <property type="entry name" value="SSF51366"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00614">
        <property type="entry name" value="IGPS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 8" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="6 8" id="KW-0057">Aromatic amino acid biosynthesis</keyword>
    <keyword evidence="4 8" id="KW-0210">Decarboxylase</keyword>
    <keyword evidence="7 8 10" id="KW-0456">Lyase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-0822">Tryptophan biosynthesis</keyword>
    <feature type="domain" description="IGPS" evidence="9">
        <location>
            <begin position="5"/>
            <end position="260"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001633"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004696"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022793"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022822"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF00218"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ64157.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="270" mass="29272" checksum="88DD55A3F3AC8513" modified="2015-12-09" version="1">MADILQKIEAYKRDEISAAKAAVSLDDLKARIQDVSAPRGFQKALEAKNAAGDYALIAEIKKASPSKGLIREDFDPPLLAKSYEAGGAACLSVLTDTPSFQGKPEFLTSAREAVSLPALRKDFLYDTYQVYEARAWGGDCILIILAAIDDETAKALEDTAFELGMDVLLEVHNAEELERALKLSSPLMGINNRNLKSFETKLETSEELAPMIPDDRIIVGESGLFTPADLARMNKVGISTFLIGESLMRQEDVASATKSLLAKETLSKAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQ56</accession>
    <name>A0A0M6ZQ56_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Malyl-CoA lyase</fullName>
            <ecNumber evidence="3">4.1.3.24</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">mcl1</name>
        <name evidence="3" type="ORF">LAX5112_00315</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the HpcH/HpaI aldolase family.</text>
    </comment>
    <dbReference type="EC" id="4.1.3.24" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64487.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00315"/>
    <dbReference type="EnsemblBacteria" id="CTQ64487">
        <property type="protein sequence ID" value="CTQ64487"/>
        <property type="gene ID" value="LAX5112_00315"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043959">
        <property type="term" value="F:L-erythro-3-methylmalyl-CoA lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050083">
        <property type="term" value="F:malyl-CoA lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005000">
        <property type="entry name" value="Aldolase/citrate-lyase_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015813">
        <property type="entry name" value="Pyrv/PenolPyrv_Kinase-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040442">
        <property type="entry name" value="Pyrv_Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03328">
        <property type="entry name" value="HpcH_HpaI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51621">
        <property type="entry name" value="SSF51621"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0456">Lyase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HpcH_HpaI" evidence="2">
        <location>
            <begin position="74"/>
            <end position="239"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005568"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF03328"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ64487.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="391" mass="42501" checksum="9343AE7793793946" modified="2015-12-09" version="1">MGCGWKRRSGEGRCVSGLHLSAFRSSCSATIGRYARATIVEDSILTKTPSAFYKPLAIGAPDPFRELPVTLERMIHFVPPHIEKMRAKVPDLIAKVDVVLGNLEDAIPADAKTDARRGFIQMAEENDFGQTGLWTRVNCLNSPWFLDDLMEIVPAVGEKLDVIMLPKVEGPWDIHYLDQLLAQLEAKAGIKKPILIHAILETAEGVKNVEAIAAASPRMHGMSLGPADLAASRGMKTTRVGGGHPDYAVLADPTEGAARTAYQQDLWHYTVAKMVDACLSYGLKPFYGPFGDFSDTDACESQFRNAFLMGCLGAWSLHPTQIDIAKRVFSPDPGEVAFAKKILEAMPDGTGAVMIDGKMQDDATWKQAKVIVDLAKVVASKDADLAEVYGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQV4</accession>
    <name>A0A0M6ZQV4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Gcv operon activator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">gcvA_2</name>
        <name evidence="3" type="ORF">LAX5112_00516</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65118.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670462.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00516"/>
    <dbReference type="EnsemblBacteria" id="CTQ65118">
        <property type="protein sequence ID" value="CTQ65118"/>
        <property type="gene ID" value="LAX5112_00516"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ65118.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="287" mass="31696" checksum="945A203DA435EF19" modified="2015-12-09" version="1">MASLRALNAFALLARHGRAALAAEKLGVSPSALSHLMRKLESELGATLVNRDGRGLTLTEEGQRLALSLGDAFDRIDEAVDSFKRRGRTELRISTVSTFATRWLIPRLPQFQSKQPDVELLLSTSTRMVDLDRENYDCAIRLGTGNWPSVESHLLWKEHLAVAMAPGLLAGKDPKDPSVLTGLPLLHSASRRNDWSQWLNAADLDHPDTKSGTLLQSRDLAIQAAIAGMGAIAIDRRFVSQELEAGHLICPDWTVLELETGYWFVRSPARTLSRPVSAFRDWLQDAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRG5</accession>
    <name>A0A0M6ZRG5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Protein-L-isoaspartate O-methyltransferase</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">L-isoaspartyl protein carboxyl methyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="3">Protein L-isoaspartyl methyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="4">Protein-beta-aspartate methyltransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="primary">pcm_2</name>
        <name evidence="7" type="ORF">LAX5112_00179</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the methyltransferase superfamily. L-isoaspartyl/D-aspartyl protein methyltransferase family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64104.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670189.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00179"/>
    <dbReference type="EnsemblBacteria" id="CTQ64104">
        <property type="protein sequence ID" value="CTQ64104"/>
        <property type="gene ID" value="LAX5112_00179"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004719">
        <property type="term" value="F:protein-L-isoaspartate (D-aspartate) O-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000682">
        <property type="entry name" value="PCMT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11579">
        <property type="entry name" value="PTHR11579"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00080">
        <property type="entry name" value="pimt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="7" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0808">Transferase</keyword>
    <feature type="coiled-coil region" evidence="6">
        <location>
            <begin position="121"/>
            <end position="148"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005369"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00013346"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00030757"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00031323"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00031350"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ64104.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="230" mass="24805" checksum="589317C05E55F7A1" modified="2015-12-09" version="1">MAAFVPGDDDRATQSNLPDEAEVRAALVLGLRQRGIASVNILSAIERLPRRLFLAARYHNLAYEDTALPMECGQTMTAPGEVAFALQLLDLQPDQTVLEVGTGSGYQTAILSQLVRHVYSLDRYQTLLKLADQRLAALKQTNVALEHRDGLSGLEKKAPFDRIVLNGAVSEIPDTLIAQLRPDGILIAPLGPPGNAQSLVRITNAESIGASKTVAEVRRVSLMPGVAQHL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRM2</accession>
    <name>A0A0M6ZRM2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Multiple resistance and pH homeostasis protein G</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">mrpG_1</name>
        <name evidence="2" type="ORF">LAX5112_00471</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64987.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00471"/>
    <dbReference type="EnsemblBacteria" id="CTQ64987">
        <property type="protein sequence ID" value="CTQ64987"/>
        <property type="gene ID" value="LAX5112_00471"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005451">
        <property type="term" value="F:monovalent cation:proton antiporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0098662">
        <property type="term" value="P:inorganic cation transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005133">
        <property type="entry name" value="PhaG_MnhG_YufB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34703">
        <property type="entry name" value="PTHR34703"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03334">
        <property type="entry name" value="PhaG_MnhG_YufB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01300">
        <property type="entry name" value="CPA3_mnhG_phaG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="37"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="66"/>
            <end position="84"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64987.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="425" mass="45594" checksum="4ABFB2AF2CD25FC0" modified="2015-12-09" version="1">MVDLIALLVKFVGVGFLLIATIGLLRFDDPFQRMHAATKAGTLGAGLVLIGIMLSKSSLDSTMMGGMTLLFLILTIPVASHLLARAAYLSGAELAGIGDADNALRDVLKRPEQPIEKQAERLDLQGMAAAAETDIATEVPVSADPVLCDAEKSGFVSLKDVVAPERVRFAAVGDAAPKLARRAAEFAARTDLPLIAVVAVDTGYVDATDNSTETMRLIRDKVGYWLPDLRSLSDDLGVSVELVYEEGDAAASMAGVGDVREFLVLPTDGWADHGVGVATPHATKQPDGLLRVASMHPGPTLYAVDVPRAGPVTVLFDGSYDVWRALDLALVERLWTATELRVFGYVDAASRAEIVQRAADANTPVVFADPELTAPDEALLPEQMVSDAVAVILPDLPRPLRTRWYGTFWQDKISPNWRGDVLVWT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRP3</accession>
    <name>A0A0M6ZRP3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 5">Beta-galactosidase</fullName>
            <shortName evidence="5">Beta-gal</shortName>
            <ecNumber evidence="3 5">3.2.1.23</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">LAX5112_00621</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 5">
            <text>Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides.</text>
            <dbReference type="EC" id="3.2.1.23"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the glycosyl hydrolase 42 family.</text>
    </comment>
    <dbReference type="EC" id="3.2.1.23" evidence="3 5"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65435.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670577.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00621"/>
    <dbReference type="EnsemblBacteria" id="CTQ65435">
        <property type="protein sequence ID" value="CTQ65435"/>
        <property type="gene ID" value="LAX5112_00621"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009341">
        <property type="term" value="C:beta-galactosidase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004565">
        <property type="term" value="F:beta-galactosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013738">
        <property type="entry name" value="Beta_galactosidase_Trimer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003476">
        <property type="entry name" value="Glyco_hydro_42"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013529">
        <property type="entry name" value="Glyco_hydro_42_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36447">
        <property type="entry name" value="PTHR36447"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02449">
        <property type="entry name" value="Glyco_hydro_42"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08532">
        <property type="entry name" value="Glyco_hydro_42M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001084">
        <property type="entry name" value="B-galactosidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="SSF52317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5 11" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="5 11" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Glyco_hydro_42" evidence="9">
        <location>
            <begin position="8"/>
            <end position="391"/>
        </location>
    </feature>
    <feature type="domain" description="Glyco_hydro_42M" evidence="10">
        <location>
            <begin position="401"/>
            <end position="588"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="6">
        <location>
            <position position="144"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="6">
        <location>
            <position position="315"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="105"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="109"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="143"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="323"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001412"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005940"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012756"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRNR" id="PIRNR001084"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR001084-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR001084-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR001084-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF02449"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF08532"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ65435.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="633" mass="71218" checksum="BD4C372DEA42EA80" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZS29</accession>
    <name>A0A0M6ZS29_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Bicarbonate transport ATP-binding protein CmpC</fullName>
            <ecNumber evidence="1">3.6.3.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">cmpC_2</name>
        <name evidence="1" type="ORF">LAX5112_00440</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.6.3.-" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64900.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00440"/>
    <dbReference type="EnsemblBacteria" id="CTQ64900">
        <property type="protein sequence ID" value="CTQ64900"/>
        <property type="gene ID" value="LAX5112_00440"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd13553">
        <property type="entry name" value="PBP2_NrtA_CpmA_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044527">
        <property type="entry name" value="NrtA/CpmA_ABC-bd_dom"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ64900.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="389" mass="41147" checksum="14FC8ABE885F43C4" modified="2015-12-09" version="1">MDAQKNETPGGGGYRGEQENMSTKLTPVIAGFIPLLDSAVLVAAREKGFAEREGIALQLIRETSWANIRDRLAVGHFDVAHMLAPMPIAASLNLTSLAVPMLAPMVLGLGGNAITVAIPIWRHMAELGANPDGDPASTAAAFAKVLSARKEKGDSLLRFGVVHPFSGHAYELRYWLAAAGLDPDLDAEITVVPPQLMADALAAGQLDGYCVGEPWNTAAVQAGTGRIATYKQAIWPDSPEKVLGVTRKWANAHPGTLSALMRAISDAADWCARPENLNELAKLLAGPNFLACSPGLCLPALGGDMRLGQNTRKSIPDFLTFSGGARAAPSPAQGVWFFSQMVRWGQAVSDPKADREAAAIFSPALYEEALGIGPDEGAQTIRLFDMGTV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZS91</accession>
    <name>A0A0M6ZS91_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Inner membrane protein YhaI</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yhaI_1</name>
        <name evidence="2" type="ORF">LAX5112_00521</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65132.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670466.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00521"/>
    <dbReference type="EnsemblBacteria" id="CTQ65132">
        <property type="protein sequence ID" value="CTQ65132"/>
        <property type="gene ID" value="LAX5112_00521"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008523">
        <property type="entry name" value="DUF805"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05656">
        <property type="entry name" value="DUF805"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="29"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="70"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="100"/>
            <end position="124"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65132.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="140" mass="15744" checksum="E08685C4F0273C2C" modified="2015-12-09" version="1">MTNAPSANISPGPVWALFSPIGRIGREPYWLCFALVWVVIAISVNMWWSSTEIDFTAESVAISQFMESNPLFPILFFVLQWIELALVIKRLQDMGFSGFWALLIFVPGLNILMVLIVGFTPGVAEPNKHGPLPNSYWRKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZT30</accession>
    <name>A0A0M6ZT30_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Stage 0 sporulation protein KE</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">oppF_1</name>
        <name evidence="8" type="ORF">LAX5112_00614</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65422.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670570.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00614"/>
    <dbReference type="EnsemblBacteria" id="CTQ65422">
        <property type="protein sequence ID" value="CTQ65422"/>
        <property type="gene ID" value="LAX5112_00614"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015833">
        <property type="term" value="P:peptide transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013563">
        <property type="entry name" value="Oligopep_ABC_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08352">
        <property type="entry name" value="oligo_HPY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01727">
        <property type="entry name" value="oligo_HPY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ABC transporter" evidence="7">
        <location>
            <begin position="6"/>
            <end position="265"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="58"/>
            <end position="65"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ65422.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="332" mass="36464" checksum="E8DDC6A1A6B313B5" modified="2015-12-09" version="1">MNAPLVEIKDVSKRFAKRLDIAEKVAQKLGAGIREEIVHAVDEVNLSVKEGEVLGLVGESGCGKSTLGRVVAGIHAPSSGQLLFQGKDVAAMSRADKKAATLAIQMIFQDPFASLNPRMRVEDIIGEAPQVHGVVSRSEASDYVDDIMKKVGLDPSLKRRYAHQFSGGQRQRIGIARALAVKPKFLVCDEAIAALDVSIQAQVINLFMDLREEFGLTYLFISHDLSVVEHIADRVAIMYLGRIVESASTEEIFSAPKHPYTKALLAEAPRLDQRKRDFAPIEGEIPSPLDPPKGCFFNPRCPHAQDLCRQEQPDLETFGGGHSVACHYWKTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="31" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTG4</accession>
    <name>A0A0M6ZTG4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Sensor protein QseC</fullName>
            <ecNumber evidence="4">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="primary">qseC_1</name>
        <name evidence="15" type="ORF">LAX5112_00857</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cell inner membrane</location>
            <topology evidence="3">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66065.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00857"/>
    <dbReference type="EnsemblBacteria" id="CTQ66065">
        <property type="protein sequence ID" value="CTQ66065"/>
        <property type="gene ID" value="LAX5112_00857"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013727">
        <property type="entry name" value="2CSK_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08521">
        <property type="entry name" value="2CSK_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="9" id="KW-0418">Kinase</keyword>
    <keyword evidence="11 12" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 15" id="KW-0808">Transferase</keyword>
    <keyword evidence="8 12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="10 12" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="20"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="171"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="14">
        <location>
            <begin position="191"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="13">
        <location>
            <begin position="250"/>
            <end position="461"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00017234"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="CTQ66065.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="465" mass="50178" checksum="F6DF83D8004F0F9A" modified="2015-12-09" version="1">MTSLLSRFGATSLTARVALGVTFLLTFGGIIVSIAAFAYGREAARTAYDRLLVGAANDIASAITVVDGHPVLELPHSAFELLALAPDDRIGYRIVGPNGQTLTGYDEIALPAGLAGYSDVFFDGAFFGEAARYVVVSRRFAERTWSGTIRVAVGQTLQARNAMAVDITRKALYVLAASGLAMLLLAVLVVRAVFNPLKRIAGGLAERDPHDLTPLDTDVPRETAMMIQALNAFMGRLDRQMNSMRHLISDTAHQLRTPVAALRAQADLFSDEEDPERKDRIVERIQTRSTSLGRLLDQMLSQALVIHRGDSVRREKIDLRDVVLDVFEEGDHAVLRPDIAVVPQLADQPVYVLADTTSLQEAVKNLLSNALKYGRAPVRIGATTENGVASIWVEDVGGGPDPEILSALGTRFNQSGLSRQNSSGLGLAIAHAVARSFEGQLVLDTHGDRTFRAALCFPEIKAEAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTI0</accession>
    <name>A0A0M6ZTI0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00664</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65526.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670612.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ65526">
        <property type="protein sequence ID" value="CTQ65526"/>
        <property type="gene ID" value="LAX5112_00664"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ65526.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="1373" mass="144623" checksum="CFD9BBE3484E5798" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTJ1</accession>
    <name>A0A0M6ZTJ1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Cytochrome c2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">cycA</name>
        <name evidence="11" type="ORF">LAX5112_00869</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66099.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00869"/>
    <dbReference type="EnsemblBacteria" id="CTQ66099">
        <property type="protein sequence ID" value="CTQ66099"/>
        <property type="gene ID" value="LAX5112_00869"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.760.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009056">
        <property type="entry name" value="Cyt_c-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036909">
        <property type="entry name" value="Cyt_c-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002327">
        <property type="entry name" value="Cyt_c_1A/1B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037783">
        <property type="entry name" value="Taf5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_repeat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019775">
        <property type="entry name" value="WD40_repeat_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19879">
        <property type="entry name" value="PTHR19879"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00034">
        <property type="entry name" value="Cytochrom_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00604">
        <property type="entry name" value="CYTCHRMECIAB"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46626">
        <property type="entry name" value="SSF46626"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="SSF50978"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51007">
        <property type="entry name" value="CYTC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00678">
        <property type="entry name" value="WD_REPEATS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="4"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 9" id="KW-0349">Heme</keyword>
    <keyword evidence="7 9" id="KW-0408">Iron</keyword>
    <keyword evidence="4 9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <keyword evidence="2 8" id="KW-0853">WD repeat</keyword>
    <feature type="repeat" description="WD" evidence="8">
        <location>
            <begin position="43"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="8">
        <location>
            <begin position="82"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="8">
        <location>
            <begin position="122"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="8">
        <location>
            <begin position="163"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="domain" description="Cytochrome c" evidence="10">
        <location>
            <begin position="348"/>
            <end position="450"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00433"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ66099.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="460" mass="49485" checksum="CFB79388EB888C12" modified="2015-12-09" version="1">MCASLIQRSFAAVGQNTVVAIAIYVCCSVWAVSAVLATEFQTLKGHGGPVMDIAVERETGVVATASFDNSVGLWTGRDPAWLDGHEAAVKVVEFIDTGRLVSAGDDNDLILWDRVSGTQQWLEGHTAKVQGLAVSPDKSLIASASWDARVGLWPVDGGEPIFLSGHNAGVNAVAFTKDGKSLYSASMDGSIILWDVEERAEKRVVDRNGFGINVLKLGGPADGPDTWLAYGAQDGVTRILDLETGDRLYEFSLERRPILGLDVSPDGTRLASGDGQGYITVFETGSWGIETDFRAALKGPIWALAFSNDGSVLHAAGIENIVYSWPVADLSSFDPMATETPAFLRKPEEMSNGERQFARKCSICHSLTDDGVRRAGPTLYKVFGRKAGTLSGYSYSATLDGSDIIWSEETIDQLFLDGPDHYIPGSKMPMQVIALPEDRKDLVDYLKVATAPKEAEGGQQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUE7</accession>
    <name>A0A0M6ZUE7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Urea ABC transporter, permease protein UrtB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_00774</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65836.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00774"/>
    <dbReference type="EnsemblBacteria" id="CTQ65836">
        <property type="protein sequence ID" value="CTQ65836"/>
        <property type="gene ID" value="LAX5112_00774"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001851">
        <property type="entry name" value="ABC_transp_permease"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02653">
        <property type="entry name" value="BPD_transp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="39"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="65"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="95"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="147"/>
            <end position="169"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="195"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="279"/>
            <end position="296"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ65836.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="314" mass="33333" checksum="50F4E4B47C40BE81" modified="2015-12-09" version="1">MIEILEILVSENFWAASLRIATPLIFGVIGALICERAGVLNLGIEGIFTAGAMAGWMAVWLGAGLWGGVLVAALAGGLFGLLHAILTVPLGLSQHVSGIGVTLFATSLSYFIYRTALPDVSSPPRIEAFQPLDIPILSDLPFIGPALFQQTSLTFLALILVLATGYVLYRTPLGLAIQAVGDNPSAVESQGLSVYGLRMGAVVVGSSIMALGGAFLTMSAFDAFFFGMVNGRGWICIALTVFASWRPGKALIGALLFGAFDAFQVRLQTEVGSFIPGQIFLMMPYILSIIALIVVARKADYPRALLVPYFRGQR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUF2</accession>
    <name>A0A0M6ZUF2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Cyclic di-GMP phosphodiesterase Gmr</fullName>
            <ecNumber evidence="3">3.1.4.52</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">gmr_5</name>
        <name evidence="3" type="ORF">LAX5112_00961</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.4.52" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66419.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00961"/>
    <dbReference type="EnsemblBacteria" id="CTQ66419">
        <property type="protein sequence ID" value="CTQ66419"/>
        <property type="gene ID" value="LAX5112_00961"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071111">
        <property type="term" value="F:cyclic-guanylate-specific phosphodiesterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd01949">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007892">
        <property type="entry name" value="CHASE4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000160">
        <property type="entry name" value="GGDEF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05228">
        <property type="entry name" value="CHASE4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00990">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00267">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00254">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50887">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="domain" description="GGDEF" evidence="2">
        <location>
            <begin position="352"/>
            <end position="486"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ66419.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="509" mass="56463" checksum="3B383F094D0B4D48" modified="2015-12-09" version="1">MAEFRRRYSDRSDSKSRIRISRLAFLLAALLIAVTSVSLVFVGFVASHASTQQAIANEERLFRNALQERLRDIVREQRTVTVSDETVRKLVRTFDPVYARQHFHALWSRYRHNKVILISGNNQVLAESFQDYTHITKRPSSETPALAPVIRKTQALFAANRVRVPGGFGHRSLQGLDTDQYALMGVIRLDGKPALFSAMPIMPDEYTATLPDGGPTLMISVKYIDDTLLERLNSQLNFARLRFEPKAFEPEDGPSHLVTSEEGVDVGSFRWESQTVIDSIWPTVIPVIAMLSLTLGALAFGIAWRIGQLTRSLQKSEEQNRYLALHDNLSGLANRLQFNRVLETSTADLPNKRFAVLHCDLDKFKAVNDTYGHAAGDTVIKIMAKRLNEVVGKPGLVCRIGGDEFMVIYRGGTSRKDLDTLCRALINKALLPIQIEGGNTAHVGLSIGVAVAPADGTEPEDLVARSDAALYRAKDRGRGVHAFYEDLLKDTFIQEDDASANTGLSSLSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUH4</accession>
    <name>A0A0M6ZUH4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Aminomethyltransferase</fullName>
            <ecNumber evidence="6">2.1.2.10</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">gcvT_5</name>
        <name evidence="6" type="ORF">LAX5112_00732</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the GcvT family.</text>
    </comment>
    <dbReference type="EC" id="2.1.2.10" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65720.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670664.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00732"/>
    <dbReference type="EnsemblBacteria" id="CTQ65720">
        <property type="protein sequence ID" value="CTQ65720"/>
        <property type="gene ID" value="LAX5112_00732"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004047">
        <property type="term" value="F:aminomethyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1360.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006076">
        <property type="entry name" value="FAD-dep_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032503">
        <property type="entry name" value="FAO_M"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013977">
        <property type="entry name" value="GCV_T_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006222">
        <property type="entry name" value="GCV_T_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029043">
        <property type="entry name" value="GcvT/YgfZ_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027266">
        <property type="entry name" value="TrmE/GcvT_dom1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01266">
        <property type="entry name" value="DAO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16350">
        <property type="entry name" value="FAO_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01571">
        <property type="entry name" value="GCV_T"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08669">
        <property type="entry name" value="GCV_T_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101790">
        <property type="entry name" value="SSF101790"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="DAO" evidence="2">
        <location>
            <begin position="9"/>
            <end position="377"/>
        </location>
    </feature>
    <feature type="domain" description="FAO_M" evidence="5">
        <location>
            <begin position="380"/>
            <end position="434"/>
        </location>
    </feature>
    <feature type="domain" description="GCV_T" evidence="3">
        <location>
            <begin position="436"/>
            <end position="701"/>
        </location>
    </feature>
    <feature type="domain" description="GCV_T_C" evidence="4">
        <location>
            <begin position="729"/>
            <end position="800"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008609"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01266"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01571"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF08669"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF16350"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ65720.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="815" mass="90965" checksum="8FD24968AD867B1E" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUU4</accession>
    <name>A0A0M6ZUU4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01007</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66545.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01007"/>
    <dbReference type="EnsemblBacteria" id="CTQ66545">
        <property type="protein sequence ID" value="CTQ66545"/>
        <property type="gene ID" value="LAX5112_01007"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021265">
        <property type="entry name" value="DUF2842"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11003">
        <property type="entry name" value="DUF2842"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="34"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="66"/>
            <end position="90"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66545.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="96" mass="10502" checksum="BB6554779E671E40" modified="2015-12-09" version="1">MLGKSGKPLWPGRGKSSLFGLQNGSRMVPSLRKFIGMVALVLFVIVYALTAMVVGDSPRLQESSTLIQFTYFAIAGLAWVIPAGAIIWWMERGKKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZV08</accession>
    <name>A0A0M6ZV08_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">NAD-dependent methanol dehydrogenase</fullName>
            <ecNumber evidence="3">1.1.1.244</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">mdh_1</name>
        <name evidence="3" type="ORF">LAX5112_00883</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.1.1.244" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66137.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670776.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00883"/>
    <dbReference type="EnsemblBacteria" id="CTQ66137">
        <property type="protein sequence ID" value="CTQ66137"/>
        <property type="gene ID" value="LAX5112_00883"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050093">
        <property type="term" value="F:methanol dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001670">
        <property type="entry name" value="ADH_Fe/GldA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018211">
        <property type="entry name" value="ADH_Fe_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039697">
        <property type="entry name" value="Alcohol_dehydrogenase_Fe"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11496">
        <property type="entry name" value="PTHR11496"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00465">
        <property type="entry name" value="Fe-ADH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00913">
        <property type="entry name" value="ADH_IRON_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00060">
        <property type="entry name" value="ADH_IRON_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Fe-ADH" evidence="2">
        <location>
            <begin position="10"/>
            <end position="371"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00465"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ66137.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="381" mass="40179" checksum="8E0F35A74F100581" modified="2015-12-09" version="1">MVLTANWSYPTAMRFGAGRISEIADACKASGISKPLLVTDKGLASMDITTKTLDLLDAAGLGRGLFSEVDPNPTDLNAAEGVKVYQDGGYDGVVAFGGGSGLDLAKVIAFMAGQTRPLWDFEDIGDWWTRANADAIAPIVAVPTTAGTGSEVGRASIITKVDTAEKKIIFHPKMLPSVVICDPELTVGMPKFLTAGTGLDAFAHCVEAYSSPHYHPMSQGIALEGMRLVVDYLPRAYADGTDLEARGHMMSAAAMGATAFQKGLGAIHALSHPIGAVHHTHHGTTNAVCMPAVLQFNKSAIADRFDKAAGYLGISGGFDGFCAFVDEFNASMNIPKTLTELGVKDPNIEKLTAAALRDPSTGGNPIEMTEKNTRALFEEIM</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZW81</accession>
    <name>A0A0M6ZW81_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Methylenetetrahydrofolate reductase</fullName>
            <ecNumber evidence="8">1.5.1.20</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">LAX5112_00989</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="2 8">
            <text>(6S)-5-methyl-5,6,7,8-tetrahydrofolate + NAD(+) = (6R)-5,10-methylene-5,6,7,8-tetrahydrofolate + H(+) + NADH</text>
            <dbReference type="Rhea" id="RHEA:19821"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15636"/>
            <dbReference type="ChEBI" id="CHEBI:18608"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="EC" id="1.5.1.20"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 8">
            <text>(6S)-5-methyl-5,6,7,8-tetrahydrofolate + NADP(+) = (6R)-5,10-methylene-5,6,7,8-tetrahydrofolate + H(+) + NADPH</text>
            <dbReference type="Rhea" id="RHEA:19817"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15636"/>
            <dbReference type="ChEBI" id="CHEBI:18608"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="EC" id="1.5.1.20"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="3 8">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="4 8">One-carbon metabolism; tetrahydrofolate interconversion.</text>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the methylenetetrahydrofolate reductase family.</text>
    </comment>
    <dbReference type="EC" id="1.5.1.20" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66496.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670897.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00989"/>
    <dbReference type="EnsemblBacteria" id="CTQ66496">
        <property type="protein sequence ID" value="CTQ66496"/>
        <property type="gene ID" value="LAX5112_00989"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00193"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0106312">
        <property type="term" value="F:methylenetetrahydrofolate reductase NADH activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0106313">
        <property type="term" value="F:methylenetetrahydrofolate reductase NADPH activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006555">
        <property type="term" value="P:methionine metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035999">
        <property type="term" value="P:tetrahydrofolate interconversion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029041">
        <property type="entry name" value="FAD-linked_oxidoreductase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003171">
        <property type="entry name" value="Mehydrof_redctse-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02219">
        <property type="entry name" value="MTHFR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51730">
        <property type="entry name" value="SSF51730"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 8" id="KW-0274">FAD</keyword>
    <keyword evidence="5 8" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="7 8" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000431"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001287"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00004777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU003862"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ66496.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="297" mass="31719" checksum="1F695AE6ED968425" modified="2015-12-09" version="1">MTDSSLLANGRLPASTEMSPKQVVEKTELLATIPAGSQVYVTDLGNAPEDTIVAAAKTLTDKGLIAVPHMAARRYASAADFERRITRLTQEAGVKEVLAIAGEADKAGPLTSSVALLETGLFDKLGIQKIAVAGHPEGAPDIKPDVIKSFLMRKHELAAESDAEFRIVTQFGFDPHQVSVWLDEIRGWGNQFPVHIGVAGPAKMTTLLKFAAFAGVENSLNFLKKRGGAVVSMLAGYDPNTMVEPLEARITSQPDSQLAQIHVYPFGGVAKTAEWLTSRGSWSFQTSSTSLTANESA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWG3</accession>
    <name>A0A0M6ZWG3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Alanine dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00766</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ornithine cyclodeaminase/mu-crystallin family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65813.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670690.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00766"/>
    <dbReference type="EnsemblBacteria" id="CTQ65813">
        <property type="protein sequence ID" value="CTQ65813"/>
        <property type="gene ID" value="LAX5112_00766"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1780.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003462">
        <property type="entry name" value="ODC_Mu_crystall"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023401">
        <property type="entry name" value="ODC_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13812">
        <property type="entry name" value="PTHR13812"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02423">
        <property type="entry name" value="OCD_Mu_crystall"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001439">
        <property type="entry name" value="CryM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008903"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65813.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="321" mass="33663" checksum="DA43F1A9FD70B167" modified="2015-12-09" version="1">MIIVPEKEIAALLGRAEAFEAVESVFAAMSSGVAYNFPVIREAIGHADALYGFKSGFDRSSLALGLKSGGYWPGNADNGLTNHQSTVFLFDADTGKARAVVGGNLLTALRTAAASAVSIKHLARKDAKVLGMIGAGHQSAFQMRAAVEQRSFEKVIGWNLHPEMLSRLEETAAELDLPFEAVDLDRLGAEADVIISITSSFDPILKVSQVTPGTHLACMGTDTKGKQEVEAELVAKATVFTDEVAQSSTIGECQNAVASGLISESDINEIGAVINGNHKGRTSVEEITLFDGTGVGLQDLAVASAVVDLAVEKGIAISVDF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWI0</accession>
    <name>A0A0M6ZWI0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01224</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67129.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671063.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67129">
        <property type="protein sequence ID" value="CTQ67129"/>
        <property type="gene ID" value="LAX5112_01224"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67129.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="109" mass="12165" checksum="145C8CBCEBB37BA9" modified="2015-12-09" version="1">MLDVSLAVGALAKTVVLKTRDAGEYDQNGNWIAGAETSQNIQATVQPMRGRQLEDLPEGIRTEAKWLIWSRWDLAVDDHIETGGETYRVMYVWPREEGGFTRGVLGLTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWJ8</accession>
    <name>A0A0M6ZWJ8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Arabinose efflux permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_01032</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66616.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670922.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01032"/>
    <dbReference type="EnsemblBacteria" id="CTQ66616">
        <property type="protein sequence ID" value="CTQ66616"/>
        <property type="gene ID" value="LAX5112_01032"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="20"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="53"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="84"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="109"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="146"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="171"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="224"/>
            <end position="251"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="263"/>
            <end position="282"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="289"/>
            <end position="308"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="314"/>
            <end position="337"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="349"/>
            <end position="370"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="376"/>
            <end position="398"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="6">
        <location>
            <begin position="223"/>
            <end position="407"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ66616.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="407" mass="42510" checksum="3AD1DFCAE223AADE" modified="2015-12-09" version="1">MTAVAQDTFVDDRLAKRNAVLLALAQALGGASASIVITTGSLVGYMMLDEDKALATVPVSAMVLGTAFGTIPAGIIMRRFGRRAGFMGSALVGVASGLLAAYAVLLNHFLLFSFACGLGGFAGAFVQQYRFAAADTASDAFKPNAISWVLAGGVLAGVVGPQTVIATKDMFAPILFAGTYVAQAGLALIAMFLLAFIKIPKPPRQSHKQAGGRPLGQIMKQPRFIVAAACGICSYALMSLVMTATPLAMIGCGLSETDAALGIQWHVLAMFGPSFFTGSLIARFGKERIVSIGLALLAGCAVVALMGLELAHFWTALILLGLGWNFGFIGATAMLTDTYRPEERNLVQAVNDFLVFGFVAAASFSSGALLNSFGWATVNILVFPFVVLCIGLLVWLAMAERKAVTTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWS0</accession>
    <name>A0A0M6ZWS0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01268</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67209.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671102.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67209">
        <property type="protein sequence ID" value="CTQ67209"/>
        <property type="gene ID" value="LAX5112_01268"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67209.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="96" mass="11020" checksum="227CD21542E0A3B3" modified="2015-12-09" version="1">MTVTPYITRPSAESLRDFANRRRKHADWLQLEINKLRKQARGLRQSGKAFQAMNLEKIANKHERNRISTLNAALSAEEKADRLEGVGEFELKEAAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWV5</accession>
    <name>A0A0M6ZWV5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Aminoalkylphosphonic acid N-acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01288</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67245.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671118.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01288"/>
    <dbReference type="EnsemblBacteria" id="CTQ67245">
        <property type="protein sequence ID" value="CTQ67245"/>
        <property type="gene ID" value="LAX5112_01288"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="2"/>
            <end position="151"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67245.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="151" mass="16719" checksum="4F066D2026C15124" modified="2015-12-09" version="1">MIKIEKATHSHLADIVAIINAGATSVRKGKEFGSFEEYRPAFEAMLAAPEMDIYVALDPSGEVIGTYQIHFLRGLAFQGRPRVELESVHVRADQRGSGVGKLMMAHAEQLAVEAGACLVQLTSNKEREGSHQFYKRLGYDQSHLGYKKMLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXB7</accession>
    <name>A0A0M6ZXB7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">braC_4</name>
        <name evidence="3" type="ORF">LAX5112_00896</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66173.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670855.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00896"/>
    <dbReference type="EnsemblBacteria" id="CTQ66173">
        <property type="protein sequence ID" value="CTQ66173"/>
        <property type="gene ID" value="LAX5112_00896"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028081">
        <property type="entry name" value="Leu-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13458">
        <property type="entry name" value="Peripla_BP_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809028" evidence="1">
        <location>
            <begin position="22"/>
            <end position="378"/>
        </location>
    </feature>
    <feature type="domain" description="Peripla_BP_6" evidence="2">
        <location>
            <begin position="23"/>
            <end position="352"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13458"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ66173.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="378" mass="40013" checksum="5574B7D0DA7C0FDD" modified="2015-12-09" version="1">MLKRLAATASVLAMLSCAAVAEPVKVGMITTLSGGGAGLGIDVRDGFLLAVKQAGNSDLEVIVEDDQRKPDVAVKLADKLVQSENVDVLTGIIWSNLAMAVVPSVTAQGKFYLSPNAGPSALAGKGCHPNYFNVAWQNDNLHEAAGAYAKDQGYKNSFILAPNYPAGKDALTGYKRFYGGELAGELYTKLGQTDYAAELAQIRASGADSVFFFLPGGMGISFLKQYADSGIDLPVVGPAFSFDQGILQAVGDAAMGVKNTSQWSKDIDNPANNAFVESFQAEYGRLPSLYASQGFDTANLLLSAMAKADVKDADAFRAALKEADFASTRGDFKFGGNHHPIQDIYVREVIKEGDVYTNKIIATGLSDHADAYAGECSM</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXC9</accession>
    <name>A0A0M6ZXC9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative phage cell wall peptidase, NlpC/P60 family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01379</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase C40 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67415.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671183.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01379"/>
    <dbReference type="EnsemblBacteria" id="CTQ67415">
        <property type="protein sequence ID" value="CTQ67415"/>
        <property type="gene ID" value="LAX5112_01379"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000064">
        <property type="entry name" value="NLP_P60_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011929">
        <property type="entry name" value="Phage_pept_NlpC/P60"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="SSF54001"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02219">
        <property type="entry name" value="phage_NlpC_fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51935">
        <property type="entry name" value="NLPC_P60"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NlpC/P60" evidence="2">
        <location>
            <begin position="2"/>
            <end position="145"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007074"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51935"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ67415.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="149" mass="16521" checksum="027A6CA3BB713161" modified="2015-12-09" version="1">MGTGRRAVLAEARRWIGTPYRHQASCRGAGSDCLGLLRGIWRALYGDEPQALTPYSADWAETGGRETLLEAGRRWLLEIAPEATEPGDVLVFRWRDGMPAKHVGILSAPLQASPRLIHAYERVGVIESPLVPSWQRRIAASFTFPKETV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXH9</accession>
    <name>A0A0M6ZXH9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Type III effector pipB2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">pipB2_2</name>
        <name evidence="1" type="ORF">LAX5112_01124</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66872.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ66872">
        <property type="protein sequence ID" value="CTQ66872"/>
        <property type="gene ID" value="LAX5112_01124"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001646">
        <property type="entry name" value="5peptide_repeat"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00805">
        <property type="entry name" value="Pentapeptide"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13599">
        <property type="entry name" value="Pentapeptide_4"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ66872.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="373" mass="39774" checksum="CB690229356110A6" modified="2015-12-09" version="1">MPKMPDRKPITFEDVMAFHAHEQPIMLRIASGMSFANMNLAGIRFIECDLTGCDFSGTALTDAQIVSCTLKGARFNGCNLKNSQIVSCDMEASEMRDTYVERAQIVAGNASNCDFSGSTFDQVSFAQPDLMDADFSRASFYRAVVLASDVTGASFANAVLSNFMLTDADLRPVDITGTFIDIALFADANLSGLDLSGQSWQHCTFHKGEFKGTNLNGANLSASVFAECDFEGASLRGVTANTTGFTKSKLDGVDLSGSQLTMANFAGAGLSGARFNSSQLFSAVFQEADCRAALFEQCDLRQVEFSHADLSGASLSASNFNLTKFHAAKTEQTVMLGTSGSRIETDTDRAIAELYRPDKVALDGDGAGQGGTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXV7</accession>
    <name>A0A0M6ZXV7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">braC_6</name>
        <name evidence="5" type="ORF">LAX5112_01183</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the leucine-binding protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67026.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671219.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01183"/>
    <dbReference type="EnsemblBacteria" id="CTQ67026">
        <property type="protein sequence ID" value="CTQ67026"/>
        <property type="gene ID" value="LAX5112_01183"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006865">
        <property type="term" value="P:amino acid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028081">
        <property type="entry name" value="Leu-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000709">
        <property type="entry name" value="Leu_Ile_Val-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13458">
        <property type="entry name" value="Peripla_BP_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00337">
        <property type="entry name" value="LEUILEVALBP"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0029">Amino-acid transport</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809031" evidence="3">
        <location>
            <begin position="23"/>
            <end position="410"/>
        </location>
    </feature>
    <feature type="domain" description="Peripla_BP_6" evidence="4">
        <location>
            <begin position="25"/>
            <end position="371"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010062"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF13458"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ67026.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="410" mass="44834" checksum="756C30B53812C5B1" modified="2015-12-09" version="1">MNYLKSLVAAAALATCSISVSSADTVKIGYIDPLSGHFALAGDTGLKHFRYAADRINEAGGAGGMTVEIVPFDNKVNPKESLVQLQKAIDQGIRYIVQGNGSSVASALIDAINKHNKRNPGEEVLFLNYAAVDPAFTNDRCSFWHFRFDADADMKMAAMTDWLAKQDDIKKIYILGQDYSFGKAVANAAVTMIAEKRPDIEIVGNELHPLGKVKDFTPYVQKMMTSDADAVITGNWGQDMTLLIKAASAAGHNVPYLTYYGGGLGAVATMGEGAIGLVKQITEFHQNIDTSEEQVANMDRFQERYGTDYYYQRVFTLMEMFDKAVDEVGENDPIKVAFALAGMEHETPYGPVSMREDNHQLIQPLFISTFSDDVSRTLEGTAFGFTTDPDGEIDGDATRTATTCQMERPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZY02</accession>
    <name>A0A0M6ZY02_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ParB/RepB/Spo0J family partition protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01241</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67161.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01241"/>
    <dbReference type="EnsemblBacteria" id="CTQ67161">
        <property type="protein sequence ID" value="CTQ67161"/>
        <property type="gene ID" value="LAX5112_01241"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003115">
        <property type="entry name" value="ParB/Sulfiredoxin_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036086">
        <property type="entry name" value="ParB/Sulfiredoxin_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02195">
        <property type="entry name" value="ParBc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00470">
        <property type="entry name" value="ParB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF110849">
        <property type="entry name" value="SSF110849"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ParB" evidence="1">
        <location>
            <begin position="11"/>
            <end position="97"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00470"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67161.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="213" mass="23902" checksum="28765B040C051351" modified="2015-12-09" version="1">MVMQEHNLKVETWATDKVKPYKNNPRQIPQSAVDKVAASLTEFGWRQPIVVDKQGVIVVGHTRWLAAQSLGMESVPVHIARNLTAKQIKAYRIADNRVGEDTVWDADLLKIELEDLAAGGFDPVSVGFEEVEGLQMLAGEGENDPQAEWQGMPEFNQPDATAHRQIIVNFKDDEAVEDFGKLIGQEITPKARSIWHPEEEIARYADKRYVAEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZY73</accession>
    <name>A0A0M6ZY73_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01447</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67599.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671272.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01447"/>
    <dbReference type="EnsemblBacteria" id="CTQ67599">
        <property type="protein sequence ID" value="CTQ67599"/>
        <property type="gene ID" value="LAX5112_01447"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.30.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006638">
        <property type="entry name" value="Elp3/MiaB/NifB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007197">
        <property type="entry name" value="rSAM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023404">
        <property type="entry name" value="rSAM_horseshoe"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04055">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00029">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00729">
        <property type="entry name" value="Elp3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51918">
        <property type="entry name" value="RADICAL_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Radical SAM core" evidence="1">
        <location>
            <begin position="195"/>
            <end position="423"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67599.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="593" mass="68447" checksum="DDBCD0EE2493B9D5" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYD4</accession>
    <name>A0A0M6ZYD4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01272</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67216.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671105.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67216">
        <property type="protein sequence ID" value="CTQ67216"/>
        <property type="gene ID" value="LAX5112_01272"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67216.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="210" mass="24002" checksum="1929684B9E41FDAB" modified="2015-12-09" version="1">MTIRPIIFSGPMIRALLEGRKTQTRRVLSNMDGVKEVRRPDRATWDFVYPKGYKNPKASPPNYAVGDLLYVRESFALSETGFAFMADHPGDTSGMGWKPSIHMPREASRLTLKVTDVRVQRVQETTQDDVLAEGAPIDPDYRDTTQDLSAPPMIKTGVAQWQSPRAWFHRLWDSLNEKRGYGWNKNPWVIALTFEVHHCNVDQFNREVAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYF3</accession>
    <name>A0A0M6ZYF3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Tyrosine kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_01010</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66553.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670911.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01010"/>
    <dbReference type="EnsemblBacteria" id="CTQ66553">
        <property type="protein sequence ID" value="CTQ66553"/>
        <property type="gene ID" value="LAX5112_01010"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="28"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="470"/>
            <end position="495"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="512"/>
            <end position="584"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="294"/>
            <end position="402"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ66553.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="786" mass="84635" checksum="2F8094F0C2123E0B" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYF5</accession>
    <name>A0A0M6ZYF5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Cytochrome c556</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">LAX5112_01539</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="PTM">
        <text evidence="7">Binds 1 heme group per subunit.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67838.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671338.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67838">
        <property type="protein sequence ID" value="CTQ67838"/>
        <property type="gene ID" value="LAX5112_01539"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010980">
        <property type="entry name" value="Cyt_c/b562"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002321">
        <property type="entry name" value="Cyt_c_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012127">
        <property type="entry name" value="Cyt_c_prime"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01322">
        <property type="entry name" value="Cytochrom_C_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000027">
        <property type="entry name" value="Cytc_c_prime"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47175">
        <property type="entry name" value="SSF47175"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51009">
        <property type="entry name" value="CYTCII"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0249">Electron transport</keyword>
    <keyword evidence="2 7" id="KW-0349">Heme</keyword>
    <keyword evidence="5 6" id="KW-0408">Iron</keyword>
    <keyword evidence="3 6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="8">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809352" evidence="8">
        <location>
            <begin position="25"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="binding site" description="covalent" evidence="7">
        <location>
            <position position="141"/>
        </location>
        <ligand>
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </ligand>
    </feature>
    <feature type="binding site" description="covalent" evidence="7">
        <location>
            <position position="144"/>
        </location>
        <ligand>
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </ligand>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="6">
        <location>
            <position position="145"/>
        </location>
        <ligand>
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR000027-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR000027-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ67838.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="152" mass="15150" checksum="742A2E4C905E267D" modified="2015-12-09" version="1">MRTISKCISIVSIAIAASLGAAQADDDPIGDRQAIMSSVGAAAGLGGGLMKGEIAYSPAAGKAAIAAMRAASLTFGDYFPDGSNTGDTEAAPAIWDNRAGFDAEIAKFAAATGTAMEAAGRAGPADLDAFKAAMGPVFGTCKSCHEGFRVKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYK7</accession>
    <name>A0A0M6ZYK7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01497</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67729.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671306.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01497"/>
    <dbReference type="EnsemblBacteria" id="CTQ67729">
        <property type="protein sequence ID" value="CTQ67729"/>
        <property type="gene ID" value="LAX5112_01497"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024409">
        <property type="entry name" value="DUF3833"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12915">
        <property type="entry name" value="DUF3833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809355" evidence="1">
        <location>
            <begin position="34"/>
            <end position="181"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67729.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="181" mass="20312" checksum="77CCA4886597DB5F" modified="2015-12-09" version="1">MSLSFSNLVSKTIFLFALTFLVFAGFTAPPAQAAKPLVLEEFFRGKTVGKGVFESKFTGIYRPFTVYLTGTWNPKTQMLRLREDFVYDDGERDTKTWFFEKVGDGRYVGQRSDVIAPTLVETGADGALRFSYIADVPLENGSILLRFTDTLTQTDRRTVRNTADVTKGGFKVGTVDLTFKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYL7</accession>
    <name>A0A0M6ZYL7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01367</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67391.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67391">
        <property type="protein sequence ID" value="CTQ67391"/>
        <property type="gene ID" value="LAX5112_01367"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809188" evidence="1">
        <location>
            <begin position="21"/>
            <end position="84"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67391.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="84" mass="8496" checksum="FFAACBB29A9DEA2C" modified="2015-12-09" version="1">MKVFATALLLFFAATGLASANCLSQAEARAVVASGQAQPLGAVAGQAGGEIIKAQLCRQGGGYVYVLSVLKNGQVTNVTVNANR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYV2</accession>
    <name>A0A0M6ZYV2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Polynucleotide kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01274</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67220.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671107.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01274"/>
    <dbReference type="EnsemblBacteria" id="CTQ67220">
        <property type="protein sequence ID" value="CTQ67220"/>
        <property type="gene ID" value="LAX5112_01274"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0418">Kinase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67220.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="146" mass="17287" checksum="8F69FAA31E246673" modified="2015-12-09" version="1">MFVIFDLDGTLCDITHRLHFIQGKKKDYDAFFDACIDDRPKWEILHVLDGLVSCGHKVEIWSGRSERVREQTVDWLDKQAGIGKLLRFMRPEKDFRPDVDLKRHWLMTERARGGFPNLTFDDRQRLVDMWRAEGVTCCQVEAWEES</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A048</accession>
    <name>A0A0M7A048_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Replicative DNA helicase</fullName>
            <ecNumber evidence="3">3.6.4.12</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">dnaB_1</name>
        <name evidence="3" type="ORF">LAX5112_01248</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.6.4.12" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67174.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671084.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01248"/>
    <dbReference type="EnsemblBacteria" id="CTQ67174">
        <property type="protein sequence ID" value="CTQ67174"/>
        <property type="gene ID" value="LAX5112_01248"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990077">
        <property type="term" value="C:primosome complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003678">
        <property type="term" value="F:DNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006269">
        <property type="term" value="P:DNA replication, synthesis of RNA primer"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.860.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036185">
        <property type="entry name" value="DNA_heli_DnaB-like_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007694">
        <property type="entry name" value="DNA_helicase_DnaB-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016136">
        <property type="entry name" value="DNA_helicase_N/primase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03796">
        <property type="entry name" value="DnaB_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48024">
        <property type="entry name" value="SSF48024"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51199">
        <property type="entry name" value="SF4_HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0347">Helicase</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="1" id="KW-0639">Primosome</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SF4 helicase" evidence="2">
        <location>
            <begin position="171"/>
            <end position="455"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022515"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51199"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ67174.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="461" mass="50635" checksum="2BABDCB7BA5A9A63" modified="2015-12-09" version="1">MIDGFPDIECEFLGLMLQDKTSINAYRTRVPEEAFTNHVTRTIWQGMCALGASGTDLSVPALRETVTLNVEQARIPSVPSFLMACMQQAKGDLGLDELAEILCERALKTQISTFAGDLMKKITDGRAGAEEIALDGSAFLANLAAARRPVVGQSIHDAGKEAIRQMEEAQRTGQTRGHDWGIRSLDDLMGRIVMGDFGLLIGPSGHGKSAFARGLANHIAKREPVLTISAEEAPADISMKDLSARSGVSSQAIEANTINEAEFEALVVANQQQHGLQSFFEYTDDMRISNIEALIRAFKHRHGACGAVVVDTIDDIDPEEPRLGMTERVIMSCRKLDKLATKLRVPIIGLGQVKTIYNDRTDITLRLSDSYGGQAVRNKASWVVLMHRPQKKLADVLIPGASTEVEREKWKGLYDTWKDRAEFICAKRRRGPDGRNTKTGWSGPATAFFDLDDGGPMEDMF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0F8</accession>
    <name>A0A0M7A0F8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01584</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67956.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671370.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67956">
        <property type="protein sequence ID" value="CTQ67956"/>
        <property type="gene ID" value="LAX5112_01584"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="25"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67956.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="93" mass="9945" checksum="1A1AFD9FA2F74E00" modified="2015-12-09" version="1">MNKFTYASIAVAAVIGAGLTFELVMPTPQESELRRVECQALTMFTPSRSKSADELCENYGGVALKDAEPSKEGLVILVRNQPVGGFAGNPKVQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0X7</accession>
    <name>A0A0M7A0X7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Methylmalonyl-CoA mutase small subunit</fullName>
            <ecNumber evidence="2">5.4.99.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">mutA</name>
        <name evidence="2" type="ORF">LAX5112_01559</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="5.4.99.2" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67890.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671352.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01559"/>
    <dbReference type="EnsemblBacteria" id="CTQ67890">
        <property type="protein sequence ID" value="CTQ67890"/>
        <property type="gene ID" value="LAX5112_01559"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031419">
        <property type="term" value="F:cobalamin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004494">
        <property type="term" value="F:methylmalonyl-CoA mutase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016176">
        <property type="entry name" value="Cbl-dep_enz_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006099">
        <property type="entry name" value="MeMalonylCoA_mutase_a/b_cat"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01642">
        <property type="entry name" value="MM_CoA_mutase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51703">
        <property type="entry name" value="SSF51703"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0413">Isomerase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="METMALONYL_COA_MUTASE" evidence="1">
        <location>
            <begin position="61"/>
            <end position="508"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01642"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67890.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="611" mass="64751" checksum="8F7DB6482E98F737" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0Y6</accession>
    <name>A0A0M7A0Y6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01851</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68698.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01851"/>
    <dbReference type="EnsemblBacteria" id="CTQ68698">
        <property type="protein sequence ID" value="CTQ68698"/>
        <property type="gene ID" value="LAX5112_01851"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021955">
        <property type="entry name" value="DUF3572"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12096">
        <property type="entry name" value="DUF3572"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ68698.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="91" mass="9701" checksum="FF3A32473A66B4F8" modified="2015-12-09" version="1">MSVEEAQGIATQALVQLSQDPEQVGRFLAFSGIGPDQIRDAASEPGFLVGVLEFYMMDEALLLAFCENAGLRPTMMAAARYALAGGPEYDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0Z3</accession>
    <name>A0A0M7A0Z3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 5">50S ribosomal protein L33</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 6" type="primary">rpmG</name>
        <name evidence="6" type="ORF">LAX5112_01857</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the bacterial ribosomal protein bL33 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68708.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008192710.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01857"/>
    <dbReference type="EnsemblBacteria" id="CTQ68708">
        <property type="protein sequence ID" value="CTQ68708"/>
        <property type="gene ID" value="LAX5112_01857"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.20.28.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00294">
        <property type="entry name" value="Ribosomal_L33"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038584">
        <property type="entry name" value="L33_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001705">
        <property type="entry name" value="Ribosomal_L33"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018264">
        <property type="entry name" value="Ribosomal_L33_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011332">
        <property type="entry name" value="Ribosomal_zn-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00471">
        <property type="entry name" value="Ribosomal_L33"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57829">
        <property type="entry name" value="SSF57829"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01023">
        <property type="entry name" value="rpmG_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00582">
        <property type="entry name" value="RIBOSOMAL_L33"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3 5" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007596"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00021231"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ68708.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="55" mass="6381" checksum="4D9A9D8258920521" modified="2015-12-09" version="1">MAKATTIKIKLLSTADTGFFYVTKKNSRTMTEKMVKRKYDPVAKKHVEFKEAKIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1W6</accession>
    <name>A0A0M7A1W6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">General stress protein 17o</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ohrB</name>
        <name evidence="2" type="ORF">LAX5112_01798</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the OsmC/Ohr family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68587.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671521.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01798"/>
    <dbReference type="EnsemblBacteria" id="CTQ68587">
        <property type="protein sequence ID" value="CTQ68587"/>
        <property type="gene ID" value="LAX5112_01798"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006979">
        <property type="term" value="P:response to oxidative stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015946">
        <property type="entry name" value="KH_dom-like_a/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019953">
        <property type="entry name" value="OHR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003718">
        <property type="entry name" value="OsmC/Ohr_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036102">
        <property type="entry name" value="OsmC/Ohrsf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33797">
        <property type="entry name" value="PTHR33797"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02566">
        <property type="entry name" value="OsmC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82784">
        <property type="entry name" value="SSF82784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03561">
        <property type="entry name" value="organ_hyd_perox"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007378"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68587.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="141" mass="14395" checksum="AEEF36B7AE6A47C3" modified="2015-12-09" version="1">MSVEVLYETKAKATGGRDGVVETLTGSFKTKLTTPKELGGAGGAGNNPEELFASGYAACFIGAMKFVGSQEKIAVPADTSITATVGIGPRSEGGFGLEVALEISVPGMDKAEAEALVAKAHEVCPYSNATRGNIDVKLSIV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1X1</accession>
    <name>A0A0M7A1X1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6 7">50S ribosomal protein L18</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7 9" type="primary">rplR</name>
        <name evidence="9" type="ORF">LAX5112_01742</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Part of the 50S ribosomal subunit; part of the 5S rRNA/L5/L18/L25 subcomplex. Contacts the 5S and 23S rRNAs.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 7">Belongs to the universal ribosomal protein uL18 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68446.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008193248.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01742"/>
    <dbReference type="EnsemblBacteria" id="CTQ68446">
        <property type="protein sequence ID" value="CTQ68446"/>
        <property type="gene ID" value="LAX5112_01742"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01337_B">
        <property type="entry name" value="Ribosomal_L18_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005484">
        <property type="entry name" value="Ribosomal_L18"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004389">
        <property type="entry name" value="Ribosomal_L18_bac-type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12899">
        <property type="entry name" value="PTHR12899"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00861">
        <property type="entry name" value="Ribosomal_L18p"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00060">
        <property type="entry name" value="L18_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 7" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="4 7 9" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="3 7" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="2 7" id="KW-0699">rRNA-binding</keyword>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007116"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00029548"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01337"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ68446.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="120" mass="12887" checksum="8C13A7115F72A020" modified="2015-12-09" version="1">MANSKQAFERRRDRVRRSVKKAANGRPRLSIFRSSKQIYAQIIDDAQGHTIVSASTIEKDLKGGLKTGADVSAAAAVGKLVAERAAAAGVKEVVFDRGGYQYHGRVKALADAAREGGLEF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A426</accession>
    <name>A0A0M7A426_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH</fullName>
            <ecNumber evidence="1">2.7.8.37</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">phnH</name>
        <name evidence="1" type="ORF">LAX5112_02189</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.7.8.37" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69629.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671831.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02189"/>
    <dbReference type="EnsemblBacteria" id="CTQ69629">
        <property type="protein sequence ID" value="CTQ69629"/>
        <property type="gene ID" value="LAX5112_02189"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061693">
        <property type="term" value="F:alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019634">
        <property type="term" value="P:organic phosphonate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.11310">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038058">
        <property type="entry name" value="PhnH-like_sp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008772">
        <property type="entry name" value="Phosphonate_metab_PhnH"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05845">
        <property type="entry name" value="PhnH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF020680">
        <property type="entry name" value="PhnH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF159709">
        <property type="entry name" value="SSF159709"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03292">
        <property type="entry name" value="PhnH_redo"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ69629.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="203" mass="21420" checksum="375F9518958ED3A4" modified="2015-12-09" version="1">MTATAALAAGFADPVHAAQGCFRTIMNALARPGTLQMLGQTHLTPPAPLTPAAAAIALTLFDYDTPVWLDKQLAQSESVKAFLRFHTGAPIISEPVEAAFALIADPANMLPLASFNQGSAEYPDTSTTLILTGQNLNSTDGVVLEGPGIKDTQTFETDPVPQVFWDQVIANNAQFPRGVDLIFAGKDTIAALPRSTSVTQKEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A427</accession>
    <name>A0A0M7A427_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">6-phosphogluconate phosphatase</fullName>
            <ecNumber evidence="1">3.1.3.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yieH_2</name>
        <name evidence="1" type="ORF">LAX5112_02260</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.3.-" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69808.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671883.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02260"/>
    <dbReference type="EnsemblBacteria" id="CTQ69808">
        <property type="protein sequence ID" value="CTQ69808"/>
        <property type="gene ID" value="LAX5112_02260"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.240">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006439">
        <property type="entry name" value="HAD-SF_hydro_IA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041492">
        <property type="entry name" value="HAD_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023198">
        <property type="entry name" value="PGP-like_dom2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13419">
        <property type="entry name" value="HAD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01509">
        <property type="entry name" value="HAD-SF-IA-v3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ69808.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="222" mass="23792" checksum="F083CAA18F1012F2" modified="2015-12-09" version="1">MTFEAILFDCDGVLVDSEKIYVEVEREHLARIGLNYSLDDYMSRFQGLGSADFWAKLDDDHRALGKGPLPETFGPELDAATLERISSELAEIAGIKALLEAHDGPRAVASSSRLHRLIHKLQHTGLHDYFAPHIYSGEQVTNGKPAPDLFVFAAEKLGVEPANCLVIEDSSNGVLAGLAAGMTVWGFVGGGHSHDGHAEQLKSAGAHKVVDSHADLSALLAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A446</accession>
    <name>A0A0M7A446_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Aerobic cobaltochelatase subunit CobS</fullName>
            <ecNumber evidence="3">6.6.1.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">cobS_2</name>
        <name evidence="3" type="ORF">LAX5112_02270</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="6.6.1.2" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69828.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008192290.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02270"/>
    <dbReference type="EnsemblBacteria" id="CTQ69828">
        <property type="protein sequence ID" value="CTQ69828"/>
        <property type="gene ID" value="LAX5112_02270"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051116">
        <property type="term" value="F:cobaltochelatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011704">
        <property type="entry name" value="ATPase_dyneun-rel_AAA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025865">
        <property type="entry name" value="CobS_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006537">
        <property type="entry name" value="PD_CobS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07728">
        <property type="entry name" value="AAA_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12556">
        <property type="entry name" value="CobS_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01650">
        <property type="entry name" value="PD_CobS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0436">Ligase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CobS_N" evidence="2">
        <location>
            <begin position="10"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="domain" description="AAA_5" evidence="1">
        <location>
            <begin position="67"/>
            <end position="191"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07728"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF12556"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ69828.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="328" mass="36727" checksum="3EFA3593E418DBA0" modified="2015-12-09" version="1">MTETTTAAMAMPDTEISVEEVFGFKSDLKVPAFSTPSEHVPEPDPDYLFDRATTLAILAGFAHNRRVMVTGYHGTGKSTHIEQVASRLNWPCIRVNLDSHISRIDLVGKDAIVLKDGQQVTEFKDGILPWAYQHNVALVFDEYDAGRPDVMFVIQRILESSGRLTLLDQSRVIRPHAAFRLFATANTVGLGDTSGLYHGTQQINQAQMDRWSIVTTLNYLPHDNEVDIVLSKAKHFQNDEGRNTVSKMVRLADMTRNAFINGDLSTVMSPRTVITWAENAEIFGDVGFSFRLTFLNKCDDMEQSLVAEFYQRCFGEDLPESAVNVVMS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A495</accession>
    <name>A0A0M7A495_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02117</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69447.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ69447">
        <property type="protein sequence ID" value="CTQ69447"/>
        <property type="gene ID" value="LAX5112_02117"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="30"/>
            <end position="49"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69447.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="55" mass="5622" checksum="2009DE0D6B1036FB" modified="2015-12-09" version="1">MLLALAGGLFAVFVINVSIGSFGGTPFFGNVGEVLCLFAVSAAFTAAVLKREAKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4X2</accession>
    <name>A0A0M7A4X2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Hydroxyquinol 1,2-dioxygenase</fullName>
            <ecNumber evidence="8">1.13.11.37</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">npcC_1</name>
        <name evidence="8" type="ORF">LAX5112_02152</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Fe(3+)</name>
            <dbReference type="ChEBI" id="CHEBI:29034"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the intradiol ring-cleavage dioxygenase family.</text>
    </comment>
    <dbReference type="EC" id="1.13.11.37" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69542.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671805.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02152"/>
    <dbReference type="EnsemblBacteria" id="CTQ69542">
        <property type="protein sequence ID" value="CTQ69542"/>
        <property type="gene ID" value="LAX5112_02152"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047074">
        <property type="term" value="F:4-hydroxycatechol 1,2-dioxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018576">
        <property type="term" value="F:catechol 1,2-dioxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008199">
        <property type="term" value="F:ferric iron binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018581">
        <property type="term" value="F:hydroxyquinol 1,2-dioxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009712">
        <property type="term" value="P:catechol-containing compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03461">
        <property type="entry name" value="1_2-HQD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.130.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039390">
        <property type="entry name" value="1_2-HQD/HQD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007535">
        <property type="entry name" value="Catechol_dOase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000627">
        <property type="entry name" value="Intradiol_dOase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015889">
        <property type="entry name" value="Intradiol_dOase_core"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00775">
        <property type="entry name" value="Dioxygenase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04444">
        <property type="entry name" value="Dioxygenase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49482">
        <property type="entry name" value="SSF49482"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00083">
        <property type="entry name" value="INTRADIOL_DIOXYGENAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 8" id="KW-0223">Dioxygenase</keyword>
    <keyword evidence="6" id="KW-0408">Iron</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5 8" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="INTRADIOL_DIOXYGENAS" evidence="7">
        <location>
            <begin position="134"/>
            <end position="162"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001965"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022964"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS00083"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ69542.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="297" mass="33481" checksum="8BC9DCB783B225EA" modified="2015-12-09" version="1">MEAHELGYFTEENSAEVVTGRNKNASDQRLKEIMEVLTRKLHEAVKEIEPTQEEWFQAIQFLTKTGHKCDDWRQEFILLSDVLGVSMLVDAVNSRRPSGASENTVLGPFHLGDAPEYEMGHNICLDEKGEDMLVWGKVTDVEGNPLEGVKIDVWQANDEGFYDVQQKGIQPEFNLRGVFRTGPDGKYCFKAVKPKHYSIPADGPVGDLLNRLGRHPFRPAHLHYIVSKDGYDELTTHIFDPDDPYIDSDSVFGVKKSLIADFKETSDPEKVASAGFDGPTYWDVEFDFVLAPKKAKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A662</accession>
    <name>A0A0M7A662_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Transcriptional regulator BetI</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_02553</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70625.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672153.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02553"/>
    <dbReference type="EnsemblBacteria" id="CTQ70625">
        <property type="protein sequence ID" value="CTQ70625"/>
        <property type="gene ID" value="LAX5112_02553"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039538">
        <property type="entry name" value="BetI_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023772">
        <property type="entry name" value="DNA-bd_HTH_TetR-type_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036271">
        <property type="entry name" value="Tet_transcr_reg_TetR-rel_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13977">
        <property type="entry name" value="TetR_C_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00440">
        <property type="entry name" value="TetR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00455">
        <property type="entry name" value="HTHTETR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48498">
        <property type="entry name" value="SSF48498"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01081">
        <property type="entry name" value="HTH_TETR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50977">
        <property type="entry name" value="HTH_TETR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0678">Repressor</keyword>
    <feature type="domain" description="HTH tetR-type" evidence="3">
        <location>
            <begin position="12"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="2">
        <location>
            <begin position="35"/>
            <end position="54"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ70625.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="214" mass="23003" checksum="FB80F30A344E10C5" modified="2015-12-09" version="1">MTRRSFHRAPEAERRQDLITATLDCISELGLQGATVREVATRAGVTPGLIRHYFSSKDQMLQAAYREVMTGMTSKVADAADKGQSSAGARLHDFIVANLTPPVADGRALSLWAAFISHVRVDPDFAEIHRESYLAFRSVLEALVADVLTEAGQAADTKRCQELAIAINGVIDGLWLEGTLVGDLFSETPLPGIAVRSVEVLLGGISLAADTQQT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="35" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6L2</accession>
    <name>A0A0M7A6L2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Cytochrome c oxidase subunit 1</fullName>
            <ecNumber evidence="9">7.1.1.9</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">ctaD</name>
        <name evidence="11" type="ORF">LAX5112_02358</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7 9">
            <text>4 Fe(II)-[cytochrome c] + 8 H(+)(in) + O2 = 4 Fe(III)-[cytochrome c] + 4 H(+)(out) + 2 H2O</text>
            <dbReference type="Rhea" id="RHEA:11436"/>
            <dbReference type="Rhea" id="RHEA-COMP:10350"/>
            <dbReference type="Rhea" id="RHEA-COMP:14399"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:29033"/>
            <dbReference type="ChEBI" id="CHEBI:29034"/>
            <dbReference type="EC" id="7.1.1.9"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3 9">Energy metabolism; oxidative phosphorylation.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 9">Cell membrane</location>
            <topology evidence="2 9">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the heme-copper respiratory oxidase family.</text>
    </comment>
    <dbReference type="EC" id="7.1.1.9" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70102.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008192095.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02358"/>
    <dbReference type="EnsemblBacteria" id="CTQ70102">
        <property type="protein sequence ID" value="CTQ70102"/>
        <property type="gene ID" value="LAX5112_02358"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00705"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045277">
        <property type="term" value="C:respiratory chain complex IV"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004129">
        <property type="term" value="F:cytochrome-c oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015990">
        <property type="term" value="P:electron transport coupled proton transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006119">
        <property type="term" value="P:oxidative phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd01663">
        <property type="entry name" value="Cyt_c_Oxidase_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.210.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023616">
        <property type="entry name" value="Cyt_c_oxase-like_su1_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036927">
        <property type="entry name" value="Cyt_c_oxase-like_su1_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000883">
        <property type="entry name" value="Cyt_C_Oxase_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023615">
        <property type="entry name" value="Cyt_c_Oxase_su1_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033944">
        <property type="entry name" value="Cyt_c_oxase_su1_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014241">
        <property type="entry name" value="Cyt_c_oxidase_su1_bac"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10422">
        <property type="entry name" value="PTHR10422"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00115">
        <property type="entry name" value="COX1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01165">
        <property type="entry name" value="CYCOXIDASEI"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81442">
        <property type="entry name" value="SSF81442"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02891">
        <property type="entry name" value="CtaD_CoxA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50855">
        <property type="entry name" value="COX1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00077">
        <property type="entry name" value="COX1_CUB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="9" id="KW-0186">Copper</keyword>
    <keyword evidence="8" id="KW-0249">Electron transport</keyword>
    <keyword evidence="8" id="KW-0349">Heme</keyword>
    <keyword evidence="9" id="KW-0408">Iron</keyword>
    <keyword evidence="6 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="11" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0679">Respiratory chain</keyword>
    <keyword evidence="4 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="8" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="31"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="70"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="114"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="163"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="201"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="248"/>
            <end position="272"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="284"/>
            <end position="308"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="320"/>
            <end position="343"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="355"/>
            <end position="376"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="396"/>
            <end position="414"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="426"/>
            <end position="447"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="467"/>
            <end position="490"/>
        </location>
    </feature>
    <feature type="domain" description="COX1" evidence="10">
        <location>
            <begin position="10"/>
            <end position="531"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004673"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00029368"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU000370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU363061"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50855"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ70102.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="531" mass="58568" checksum="0A2605C80DDBC9FA" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6S8</accession>
    <name>A0A0M7A6S8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative ribosomal N-acetyltransferase YdaF</fullName>
            <ecNumber evidence="2">2.3.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ydaF_2</name>
        <name evidence="2" type="ORF">LAX5112_02370</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.3.1.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70126.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02370"/>
    <dbReference type="EnsemblBacteria" id="CTQ70126">
        <property type="protein sequence ID" value="CTQ70126"/>
        <property type="gene ID" value="LAX5112_02370"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13302">
        <property type="entry name" value="Acetyltransf_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="31"/>
            <end position="191"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70126.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="212" mass="23882" checksum="0FA7F50214FA813B" modified="2015-12-09" version="1">MSLLRPGPPPDAELLIEAGAHYLRPPIMSDFKVWCLLRSDSRAFLTPWEPLWPSDDLSKSGFRRRLRRYARDRKEGRSLTFLLFNARNDGLLGGLTLSNIRRGVSQSATLGYWMGERHAGKGHMSAAVAMILPFCFDVLNLHRIEAACIPTNTPSIRLLEKAGFNREGYARNYLLINGTWQDHLLLSCLAEDYAARPDAVSPLVEGILKDFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6W6</accession>
    <name>A0A0M7A6W6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DUF4105 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02389</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70166.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672006.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70166">
        <property type="protein sequence ID" value="CTQ70166"/>
        <property type="gene ID" value="LAX5112_02389"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025178">
        <property type="entry name" value="DUF4105"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13387">
        <property type="entry name" value="DUF4105"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="33"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="60"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="domain" description="DUF4105" evidence="2">
        <location>
            <begin position="120"/>
            <end position="266"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13387"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ70166.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="334" mass="37710" checksum="E7C0543724BFF15A" modified="2015-12-09" version="1">MLRSIFFAAVGLAVFLAAAFAAAASYYWLGWPNAVRTGLALLWVPVVLALWFVPGRTRRLRRVAGLASLGIFFAAYFTKTPVPQTFVPLHQEVADFNFNGSQVMITNFRDAIHPVGAPAQPRWTTARFNLNDVTGARFILQPFGKSLAMVHVMTSFEFENGDNLAVSFEARRTSWDKFDPLAGFFRHNQLYVVLGTERDLLWKRLAHVPPNELFILDITQPDEEIRTYLQRLLKFSASLHDKPQFYSTITESCFTTLLKLSPHVQEVVPWYDVRRWVPGASIGLLQDLGVVDNGLSAEGLAKRQKLGSDVQPPWEFATSNLWSRHLRAEIGKTD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A837</accession>
    <name>A0A0M7A837_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">ATP-dependent protease subunit HslV</fullName>
            <ecNumber evidence="7">3.4.25.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">clpQ</name>
        <name evidence="7" type="synonym">hslV</name>
        <name evidence="8" type="ORF">LAX5112_02782</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>ATP-dependent cleavage of peptide bonds with broad specificity.</text>
            <dbReference type="EC" id="3.4.25.2"/>
        </reaction>
    </comment>
    <comment type="activity regulation">
        <text evidence="7">Allosterically activated by HslU binding.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">A double ring-shaped homohexamer of HslV is capped on each side by a ring-shaped HslU homohexamer. The assembly of the HslU/HslV complex is dependent on binding of ATP.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 7">Belongs to the peptidase T1B family. HslV subfamily.</text>
    </comment>
    <dbReference type="EC" id="3.4.25.2" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71325.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672334.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02782"/>
    <dbReference type="EnsemblBacteria" id="CTQ71325">
        <property type="protein sequence ID" value="CTQ71325"/>
        <property type="gene ID" value="LAX5112_02782"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009376">
        <property type="term" value="C:HslUV protease complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005839">
        <property type="term" value="C:proteasome core complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004298">
        <property type="term" value="F:threonine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051603">
        <property type="term" value="P:proteolysis involved in protein catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01913">
        <property type="entry name" value="protease_HslV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00248">
        <property type="entry name" value="HslV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022281">
        <property type="entry name" value="ATP-dep_Prtase_HsIV_su"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029055">
        <property type="entry name" value="Ntn_hydrolases_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001353">
        <property type="entry name" value="Proteasome_sua/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023333">
        <property type="entry name" value="Proteasome_suB-type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32194">
        <property type="entry name" value="PTHR32194"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00227">
        <property type="entry name" value="Proteasome"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF039093">
        <property type="entry name" value="HslV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56235">
        <property type="entry name" value="SSF56235"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03692">
        <property type="entry name" value="ATP_dep_HslV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51476">
        <property type="entry name" value="PROTEASOME_BETA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 7" id="KW-0021">Allosteric enzyme</keyword>
    <keyword evidence="7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 7 8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3 7 8" id="KW-0645">Protease</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 7" id="KW-0915">Sodium</keyword>
    <keyword evidence="4 7" id="KW-0888">Threonine protease</keyword>
    <feature type="active site" evidence="7">
        <location>
            <position position="13"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="167"/>
        </location>
        <ligand>
            <name>Na(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29101"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="170"/>
        </location>
        <ligand>
            <name>Na(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29101"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="173"/>
        </location>
        <ligand>
            <name>Na(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29101"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006053"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022533"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022698"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023053"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00248"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ71325.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="186" mass="19909" checksum="EDB24D3A511584B8" modified="2015-12-09" version="1">MSESREPAVWHGTTIMMVRKGGKVVIAGDGQVSLGQTVIKHTARKVRPLAKGEVIAGFAGATADAFTLFERLESKLEQYPGQLMRACVELAKDWRTDRYLRKLEAMMLVADKNTSLVLTGTGDVLEPEGGIMGIGSGGNYALAAGRALADTDFDAETIARKAMAVAAEICVYTNESITVEVLETAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8V7</accession>
    <name>A0A0M7A8V7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">TRAP transporter, 4TM/12TM fusion protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02700</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71051.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672257.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02700"/>
    <dbReference type="EnsemblBacteria" id="CTQ71051">
        <property type="protein sequence ID" value="CTQ71051"/>
        <property type="gene ID" value="LAX5112_02700"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010656">
        <property type="entry name" value="DctM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011853">
        <property type="entry name" value="TRAP_DctM-Dct_fused"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06808">
        <property type="entry name" value="DctM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02123">
        <property type="entry name" value="TRAP_fused"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="37"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="84"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="115"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="168"/>
            <end position="188"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="200"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="227"/>
            <end position="247"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="254"/>
            <end position="280"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="300"/>
            <end position="322"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="389"/>
            <end position="413"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="425"/>
            <end position="446"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="467"/>
            <end position="485"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="520"/>
            <end position="545"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="557"/>
            <end position="580"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="587"/>
            <end position="606"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="612"/>
            <end position="638"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="650"/>
            <end position="670"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="682"/>
            <end position="702"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="714"/>
            <end position="742"/>
        </location>
    </feature>
    <feature type="domain" description="DctM" evidence="2">
        <location>
            <begin position="243"/>
            <end position="669"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF06808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ71051.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="760" mass="79674" checksum="B3A908AC898FE11E" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAG2</accession>
    <name>A0A0M7AAG2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02881</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71607.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672397.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02881"/>
    <dbReference type="EnsemblBacteria" id="CTQ71607">
        <property type="protein sequence ID" value="CTQ71607"/>
        <property type="gene ID" value="LAX5112_02881"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046038">
        <property type="entry name" value="DUF5996"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19459">
        <property type="entry name" value="DUF5996"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ71607.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="296" mass="33257" checksum="2674805F60BD0337" modified="2015-12-09" version="1">MLPALPYQDWSETKDTLHLFLQMIGKIRLKAHPKLNHWWHVTLYPHVRGLTTGRIPYGTSGFEILYDMLDHTVTISRNDGERASFSTPGLTVAEFYQALFSRLEQLGISVKIVAVPYDNKSKMPFPDDTAPRPYDKQAVSDFWRALCSISSVFETYRSGFVGKQTPVQLYWHSFDLVVTRFSGRAHPLESGTQSDREAYSHEVISIGFWPGDDSFPEGAFYGYAYPEPEGMSQVLLQPADAFWAEKNGGALAILKYEDARTAADPAAAILSFLNSVYDGAAVKADWPVEDLAHEHI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABA4</accession>
    <name>A0A0M7ABA4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Methylated-DNA--protein-cysteine methyltransferase, constitutive</fullName>
            <ecNumber evidence="7">2.1.1.63</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ogt</name>
        <name evidence="7" type="ORF">LAX5112_03076</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>a 4-O-methyl-thymidine in DNA + L-cysteinyl-[protein] = a thymidine in DNA + S-methyl-L-cysteinyl-[protein]</text>
            <dbReference type="Rhea" id="RHEA:53428"/>
            <dbReference type="Rhea" id="RHEA-COMP:10131"/>
            <dbReference type="Rhea" id="RHEA-COMP:10132"/>
            <dbReference type="Rhea" id="RHEA-COMP:13555"/>
            <dbReference type="Rhea" id="RHEA-COMP:13556"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:82612"/>
            <dbReference type="ChEBI" id="CHEBI:137386"/>
            <dbReference type="ChEBI" id="CHEBI:137387"/>
            <dbReference type="EC" id="2.1.1.63"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>a 6-O-methyl-2'-deoxyguanosine in DNA + L-cysteinyl-[protein] = a 2'-deoxyguanosine in DNA + S-methyl-L-cysteinyl-[protein]</text>
            <dbReference type="Rhea" id="RHEA:24000"/>
            <dbReference type="Rhea" id="RHEA-COMP:10131"/>
            <dbReference type="Rhea" id="RHEA-COMP:10132"/>
            <dbReference type="Rhea" id="RHEA-COMP:11367"/>
            <dbReference type="Rhea" id="RHEA-COMP:11368"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:82612"/>
            <dbReference type="ChEBI" id="CHEBI:85445"/>
            <dbReference type="ChEBI" id="CHEBI:85448"/>
            <dbReference type="EC" id="2.1.1.63"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.1.1.63" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72159.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672566.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03076"/>
    <dbReference type="EnsemblBacteria" id="CTQ72159">
        <property type="protein sequence ID" value="CTQ72159"/>
        <property type="gene ID" value="LAX5112_03076"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003908">
        <property type="term" value="F:methylated-DNA-[protein]-cysteine S-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06445">
        <property type="entry name" value="ATase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001497">
        <property type="entry name" value="MethylDNA_cys_MeTrfase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014048">
        <property type="entry name" value="MethylDNA_cys_MeTrfase_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036217">
        <property type="entry name" value="MethylDNA_cys_MeTrfase_DNAb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036631">
        <property type="entry name" value="MGMT_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01035">
        <property type="entry name" value="DNA_binding_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46767">
        <property type="entry name" value="SSF46767"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53155">
        <property type="entry name" value="SSF53155"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00589">
        <property type="entry name" value="ogt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00374">
        <property type="entry name" value="MGMT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0227">DNA damage</keyword>
    <keyword evidence="5" id="KW-0234">DNA repair</keyword>
    <keyword evidence="3 7" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="DNA_binding_1" evidence="6">
        <location>
            <begin position="69"/>
            <end position="145"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001286"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001596"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF01035"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ72159.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="151" mass="16131" checksum="8492473AA7EDBCC1" modified="2015-12-09" version="1">MPVAGVETWLGCLTVTETDGAITDLQWNGEPSQAETPLLRETIRQLSAYLDGDLKNFDLPLSPKGGDLHQAVFKAMLEIPYGETRTYGDLARDLDTYGQPIGRACGANPIPVIIPCHRILSANGLGGYSGSGGTETKIALLKLEGGFPFLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABJ8</accession>
    <name>A0A0M7ABJ8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Glucose-6-phosphate 1-dehydrogenase</fullName>
            <shortName evidence="5">G6PD</shortName>
            <ecNumber evidence="5">1.1.1.49</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 9" type="primary">zwf</name>
        <name evidence="9" type="ORF">LAX5112_02687</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Catalyzes the oxidation of glucose 6-phosphate to 6-phosphogluconolactone.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>D-glucose 6-phosphate + NADP(+) = 6-phospho-D-glucono-1,5-lactone + H(+) + NADPH</text>
            <dbReference type="Rhea" id="RHEA:15841"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:57955"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="ChEBI" id="CHEBI:61548"/>
            <dbReference type="EC" id="1.1.1.49"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="5">Carbohydrate degradation; pentose phosphate pathway; D-ribulose 5-phosphate from D-glucose 6-phosphate (oxidative stage): step 1/3.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the glucose-6-phosphate dehydrogenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.49" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71014.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672247.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02687"/>
    <dbReference type="EnsemblBacteria" id="CTQ71014">
        <property type="protein sequence ID" value="CTQ71014"/>
        <property type="gene ID" value="LAX5112_02687"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00115">
        <property type="reaction ID" value="UER00408"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004345">
        <property type="term" value="F:glucose-6-phosphate dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050661">
        <property type="term" value="F:NADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006006">
        <property type="term" value="P:glucose metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006098">
        <property type="term" value="P:pentose-phosphate shunt"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00966">
        <property type="entry name" value="G6PD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001282">
        <property type="entry name" value="G6P_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019796">
        <property type="entry name" value="G6P_DH_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022675">
        <property type="entry name" value="G6P_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022674">
        <property type="entry name" value="G6P_DH_NAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23429">
        <property type="entry name" value="PTHR23429"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02781">
        <property type="entry name" value="G6PD_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00479">
        <property type="entry name" value="G6PD_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000110">
        <property type="entry name" value="G6PD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00079">
        <property type="entry name" value="G6PDHDRGNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00871">
        <property type="entry name" value="zwf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00069">
        <property type="entry name" value="G6P_DEHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="1 5" id="KW-0313">Glucose metabolism</keyword>
    <keyword evidence="2 5" id="KW-0521">NADP</keyword>
    <keyword evidence="3 5 9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="G6PD_N" evidence="7">
        <location>
            <begin position="14"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="domain" description="G6PD_C" evidence="8">
        <location>
            <begin position="189"/>
            <end position="485"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="5">
        <location>
            <position position="240"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="51"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="92"/>
            <end position="93"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="148"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="178"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5 6">
        <location>
            <position position="182"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="216"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="235"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="339"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022526"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF02781"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ71014.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="491" mass="54532" checksum="AE0C6B82EAFB2E72" modified="2015-12-09" version="1">MAVRVIEVAEFDLVVFGASGDLAHRKLLPALYHRDADGQMPDDARIIASARRDYSDDDYRDYARKALKEHVSDLDDAHLEKFLKRIRYVKIDIGTGEGFEDLKTVLEEREDVIRAFYLAVGPDLFGTICENLGKISVVNTHSRVVMEKPIGKDGASAKALNATVGAVFNEDQIFRIDHYLGKETVQNLMALRFANALFEPLWNAAHIDHVQITVAESLGTGGRAGYYDTAGALRDMVQNHILQLLCLVAMEPPESMNADSVRDEKLKVLKALAPIGEHNADKLTVRGQYRAGASAGGAVPGYLEELGNDQSGTETFVALKAEIANWRWAGVPFYLRTGKRLAQRVSEIVVQFRPIPHSIFDEEAGAITANRLIIRLQPDEGVQMKVMIKDPGPGGMRLRQVPLDMSFAEAFKVRNPDAYERLIMDVIRGNQTLFMRRDEVDAAWAWIDPIQAAWVASKETPKGYTAGTWGPSASIALVERDGRTWAEDELV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABR3</accession>
    <name>A0A0M7ABR3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Light-independent protochlorophyllide reductase subunit N</fullName>
            <shortName evidence="1">DPOR subunit N</shortName>
            <shortName evidence="1">LI-POR subunit N</shortName>
            <ecNumber evidence="1">1.3.7.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1 3" type="primary">bchN</name>
        <name evidence="3" type="ORF">LAX5112_02945</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (BchN-BchB) is the catalytic component of the complex.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>2 ADP + chlorophyllide a + oxidized 2[4Fe-4S]-[ferredoxin] + 2 phosphate = 2 ATP + 2 H2O + protochlorophyllide a + reduced 2[4Fe-4S]-[ferredoxin]</text>
            <dbReference type="Rhea" id="RHEA:28202"/>
            <dbReference type="Rhea" id="RHEA-COMP:10002"/>
            <dbReference type="Rhea" id="RHEA-COMP:10004"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33722"/>
            <dbReference type="ChEBI" id="CHEBI:33723"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:83348"/>
            <dbReference type="ChEBI" id="CHEBI:83350"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="1.3.7.7"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
        <text evidence="1">Binds 1 [4Fe-4S] cluster per heterodimer. The cluster is bound at the heterodimer interface by residues from both subunits.</text>
    </comment>
    <comment type="pathway">
        <text evidence="1">Porphyrin-containing compound metabolism; bacteriochlorophyll biosynthesis (light-independent).</text>
    </comment>
    <comment type="subunit">
        <text evidence="1">Protochlorophyllide reductase is composed of three subunits; BchL, BchN and BchB. Forms a heterotetramer of two BchB and two BchN subunits.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the BchN/ChlN family.</text>
    </comment>
    <dbReference type="EC" id="1.3.7.7" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71836.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672460.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02945"/>
    <dbReference type="EnsemblBacteria" id="CTQ71836">
        <property type="protein sequence ID" value="CTQ71836"/>
        <property type="gene ID" value="LAX5112_02945"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00671"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016730">
        <property type="term" value="F:oxidoreductase activity, acting on iron-sulfur proteins as donors"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016636">
        <property type="term" value="F:oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0036070">
        <property type="term" value="P:light-independent bacteriochlorophyll biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019685">
        <property type="term" value="P:photosynthesis, dark reaction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00352">
        <property type="entry name" value="ChlN_BchN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000510">
        <property type="entry name" value="Nase/OxRdtase_comp1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005970">
        <property type="entry name" value="Protochl_reductN"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00148">
        <property type="entry name" value="Oxidored_nitro"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000162">
        <property type="entry name" value="P_chlorophyll_rd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01279">
        <property type="entry name" value="DPOR_bchN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="1" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0077">Bacteriochlorophyll biosynthesis</keyword>
    <keyword evidence="1" id="KW-0149">Chlorophyll biosynthesis</keyword>
    <keyword evidence="1" id="KW-0408">Iron</keyword>
    <keyword evidence="1" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="1 3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="1" id="KW-0602">Photosynthesis</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Oxidored_nitro" evidence="2">
        <location>
            <begin position="32"/>
            <end position="412"/>
        </location>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="25"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <note>ligand shared with heterodimeric partner</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="50"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <note>ligand shared with heterodimeric partner</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="111"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <note>ligand shared with heterodimeric partner</note>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00148"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ71836.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="434" mass="47195" checksum="EAA3BE21CCB20215" modified="2015-12-09" version="1">MNQAFSAGCATGPTIRERGQHEVFCGLTSIIWLHRKVQDAFFLIVGSRTCAHLMQSAAGVMIFSEPRFATAIMEERDLAGMADMHDELDGVVDKLLARRPDIKMLVLVGSCPSEVIKFDLSKAAERLNRVHAPKHRVLCYSGSGIETTFTQGEDNFLTALVNEAPASGPQNETKLIVAGCLPDVVEDQFTRLFDDLGIEGVQFLPGRSSAAMPSIGPGTRFILAQPYLGAAAAALQSRGAERINSIFPLGEQGTTAWFKAIADTFGVPEDRFEAATGAPRKRAKAALQSYLPWLEGRRMFFFPDSQLEPSLARFLHSETGAEIIEVGSPYLHREHAAGELALLPPGTAISEGQDVDLQIDRARKADPDLIVCGMGLANPFEAEGRLTKWSIEFAFTPIQGYEQAGDLAELFVRPLRRQSVLKTGLGFEEGAPCS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACD6</accession>
    <name>A0A0M7ACD6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03300</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72785.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672723.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72785">
        <property type="protein sequence ID" value="CTQ72785"/>
        <property type="gene ID" value="LAX5112_03300"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ72785.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="150" mass="17018" checksum="AB460FF984B50D1A" modified="2015-12-09" version="1">MTDKILNHVIVEGTTLQIERLLAAHFRKLSAAEELRRPFTNHVFIWHSIVPLPVSVSELGDVAKVLNWQLENWEYAFLPQNETESSFGQNGSFNFRFSTIGAEPRPVLEALVKKFPGLKFNFASISMPNFCVFMGVGHNGRLTCVDDEYC</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACJ2</accession>
    <name>A0A0M7ACJ2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Cyclohexadienyl dehydratase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">pheC</name>
        <name evidence="3" type="ORF">LAX5112_03325</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72835.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672743.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03325"/>
    <dbReference type="EnsemblBacteria" id="CTQ72835">
        <property type="protein sequence ID" value="CTQ72835"/>
        <property type="gene ID" value="LAX5112_03325"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00062">
        <property type="entry name" value="PBPb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="domain" description="PBPb" evidence="2">
        <location>
            <begin position="41"/>
            <end position="270"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00062"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ72835.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="282" mass="31000" checksum="F3797EE6C13AD7D3" modified="2015-12-09" version="1">MIVMSLRKLFNALFRPAIGVLAVLWTIFPSAFVHAEDCPDNFRVGASDDYEPFSYIGADGKLTGLDLRFVQQILGEAGCTPQFLDLPFPRAVVELAAGRIDMMMFASVTAERQNFALFSAPYRNETAGLIIRARDQGRYPITEVGDLLKLKLLLAHDVGTYRGDLFETFMANPAAKENIIQVSSSRQSLNMLVKERINAIVETPAAVFALAETLGVRDQIAEHPFLLWSEPVHFMFSRKTVSPVFVAQIDALLADAVQTPEYTSQFGSMSVGSPANAGSETN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADH8</accession>
    <name>A0A0M7ADH8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6 9">D-3-phosphoglycerate dehydrogenase</fullName>
            <ecNumber evidence="9">1.1.1.95</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">serA_2</name>
        <name evidence="11" type="ORF">LAX5112_03204</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Catalyzes the reversible oxidation of 3-phospho-D-glycerate to 3-phosphonooxypyruvate, the first step of the phosphorylated L-serine biosynthesis pathway. Also catalyzes the reversible oxidation of 2-hydroxyglutarate to 2-oxoglutarate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2 9">
            <text>(2R)-3-phosphoglycerate + NAD(+) = 3-phosphooxypyruvate + H(+) + NADH</text>
            <dbReference type="Rhea" id="RHEA:12641"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:18110"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:58272"/>
            <dbReference type="EC" id="1.1.1.95"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>(R)-2-hydroxyglutarate + NAD(+) = 2-oxoglutarate + H(+) + NADH</text>
            <dbReference type="Rhea" id="RHEA:49612"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15801"/>
            <dbReference type="ChEBI" id="CHEBI:16810"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="EC" id="1.1.1.399"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="4 9">Amino-acid biosynthesis; L-serine biosynthesis; L-serine from 3-phospho-D-glycerate: step 1/3.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5 9">Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.95" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72502.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03204"/>
    <dbReference type="EnsemblBacteria" id="CTQ72502">
        <property type="protein sequence ID" value="CTQ72502"/>
        <property type="gene ID" value="LAX5112_03204"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00135">
        <property type="reaction ID" value="UER00196"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004617">
        <property type="term" value="F:phosphoglycerate dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006564">
        <property type="term" value="P:L-serine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.90">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045865">
        <property type="entry name" value="ACT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002912">
        <property type="entry name" value="ACT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029009">
        <property type="entry name" value="ASB_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006139">
        <property type="entry name" value="D-isomer_2_OHA_DH_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029753">
        <property type="entry name" value="D-isomer_DH_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006140">
        <property type="entry name" value="D-isomer_DH_NAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006236">
        <property type="entry name" value="PGDH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045626">
        <property type="entry name" value="PGDH_ASB_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00389">
        <property type="entry name" value="2-Hacid_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02826">
        <property type="entry name" value="2-Hacid_dh_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19304">
        <property type="entry name" value="PGDH_inter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF143548">
        <property type="entry name" value="SSF143548"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55021">
        <property type="entry name" value="SSF55021"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01327">
        <property type="entry name" value="PGDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51671">
        <property type="entry name" value="ACT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00670">
        <property type="entry name" value="D_2_HYDROXYACID_DH_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="9" id="KW-0520">NAD</keyword>
    <keyword evidence="7 9 11" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 9" id="KW-0718">Serine biosynthesis</keyword>
    <feature type="domain" description="ACT" evidence="10">
        <location>
            <begin position="456"/>
            <end position="528"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000646"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001878"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00003800"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00005216"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00005854"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00021582"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023299"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU363003"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51671"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ72502.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="528" mass="56620" checksum="FB1EA26184C0F0CE" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADM1</accession>
    <name>A0A0M7ADM1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03219</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72542.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72542">
        <property type="protein sequence ID" value="CTQ72542"/>
        <property type="gene ID" value="LAX5112_03219"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ72542.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="125" mass="13924" checksum="44CC89F6C85C8460" modified="2015-12-09" version="1">MPDPITGYAIGGHDPVSYFVDGYPRKGSREYTYKWGDTEWVFVNKGNMEAFKLHPNAYAPMFAACGGYGLSEGFATAGNPFIYAIVEGRLMFFYSVVNRFLFIVNGTQRLTEARSHAETVGCLPE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEA3</accession>
    <name>A0A0M7AEA3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Coupling protein CheW</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">cheW</name>
        <name evidence="2" type="ORF">LAX5112_03222</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72550.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672650.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03222"/>
    <dbReference type="EnsemblBacteria" id="CTQ72550">
        <property type="protein sequence ID" value="CTQ72550"/>
        <property type="gene ID" value="LAX5112_03222"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006935">
        <property type="term" value="P:chemotaxis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039315">
        <property type="entry name" value="CheW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036061">
        <property type="entry name" value="CheW-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002545">
        <property type="entry name" value="CheW-lke_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22617">
        <property type="entry name" value="PTHR22617"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01584">
        <property type="entry name" value="CheW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00260">
        <property type="entry name" value="CheW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50341">
        <property type="entry name" value="SSF50341"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50851">
        <property type="entry name" value="CHEW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CheW-like" evidence="1">
        <location>
            <begin position="18"/>
            <end position="157"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50851"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72550.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="163" mass="17808" checksum="5F24FEFFC70B4C63" modified="2015-12-09" version="1">MSMLENKVAGDKNAGNDMIQYVTVVIGGQLFGLPISQVHDVFVPESVTRVPMSAPEVQGVLNLRGRIVTAINMRRRLHLPPLQDEQMMAVGIEYKHESYGLVIDTVGEVLTLTSSSAEPNPSNLDRRWAEIAGGVHRLDGQLMVILDVDRLLGAMFTEPMAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AF57</accession>
    <name>A0A0M7AF57_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Biotin--[biotin carboxyl-carrier protein] ligase</fullName>
            <ecNumber evidence="3">6.3.4.15</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">birA</name>
        <name evidence="5" type="ORF">LAX5112_03475</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + biotin + L-lysyl-[protein] = AMP + diphosphate + H(+) + N(6)-biotinyl-L-lysyl-[protein]</text>
            <dbReference type="Rhea" id="RHEA:11756"/>
            <dbReference type="Rhea" id="RHEA-COMP:9752"/>
            <dbReference type="Rhea" id="RHEA-COMP:10505"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29969"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57586"/>
            <dbReference type="ChEBI" id="CHEBI:83144"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.3.4.15"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="6.3.4.15" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73251.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672867.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03475"/>
    <dbReference type="EnsemblBacteria" id="CTQ73251">
        <property type="protein sequence ID" value="CTQ73251"/>
        <property type="gene ID" value="LAX5112_03475"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004077">
        <property type="term" value="F:biotin-[acetyl-CoA-carboxylase] ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd16442">
        <property type="entry name" value="BPL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.930.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045864">
        <property type="entry name" value="aa-tRNA-synth_II/BPL/LPL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004408">
        <property type="entry name" value="Biotin_CoA_COase_ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003142">
        <property type="entry name" value="BPL_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004143">
        <property type="entry name" value="BPL_LPL_catalytic"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008988">
        <property type="entry name" value="Transcriptional_repressor_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02237">
        <property type="entry name" value="BPL_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03099">
        <property type="entry name" value="BPL_LplA_LipB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50037">
        <property type="entry name" value="SSF50037"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55681">
        <property type="entry name" value="SSF55681"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00121">
        <property type="entry name" value="birA_ligase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51733">
        <property type="entry name" value="BPL_LPL_CATALYTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0092">Biotin</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="BPL/LPL catalytic" evidence="4">
        <location>
            <begin position="21"/>
            <end position="194"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023267"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00024227"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51733"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ73251.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="261" mass="27962" checksum="6CE00CAEA5159B5D" modified="2015-12-09" version="1">MNSPAPHLETKGPAPGAPDFLYEAYETVGSTNALCLERAVSGHPGNLWIRAGVQTAGRGRRGRAWTSPQGNLFASVLLIDPAPLARIGELPLLSAVALAEAVDKAAGTLQLVSLKWPNDLLVYGAKLSGILLEAETLKDGRLAAVMGFGVNCVSHPDPAMYQATDLRGLGFQVSADSLFAALAETLAKYLAIWHQPDGFDRIRRQWLKRAAHLGQKITVRAAQEEITGIFDDLDASGHLVLRLDNGQKRTVYAGDVFLSGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFM3</accession>
    <name>A0A0M7AFM3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Peptide chain release factor 2</fullName>
            <shortName evidence="4">RF-2</shortName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4 7" type="primary">prfB</name>
        <name evidence="7" type="ORF">LAX5112_03535</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="PTM">
        <text evidence="4">Methylated by PrmC. Methylation increases the termination efficiency of RF2.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the prokaryotic/mitochondrial release factor family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73411.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03535"/>
    <dbReference type="EnsemblBacteria" id="CTQ73411">
        <property type="protein sequence ID" value="CTQ73411"/>
        <property type="gene ID" value="LAX5112_03535"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016149">
        <property type="term" value="F:translation release factor activity, codon specific"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00094">
        <property type="entry name" value="Rel_fac_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005139">
        <property type="entry name" value="PCRF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000352">
        <property type="entry name" value="Pep_chain_release_fac_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045853">
        <property type="entry name" value="Pep_chain_release_fac_I_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004374">
        <property type="entry name" value="PrfB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03462">
        <property type="entry name" value="PCRF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00472">
        <property type="entry name" value="RF-1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00937">
        <property type="entry name" value="PCRF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75620">
        <property type="entry name" value="SSF75620"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00020">
        <property type="entry name" value="prfB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00745">
        <property type="entry name" value="RF_PROK_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2 4" id="KW-0488">Methylation</keyword>
    <keyword evidence="3 4" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RF_PROK_I" evidence="6">
        <location>
            <begin position="189"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="5">
        <location>
            <begin position="33"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="modified residue" description="N5-methylglutamine" evidence="4">
        <location>
            <position position="196"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010835"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022481"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00094"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS00745"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ73411.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="322" mass="35882" checksum="B052F4B9637967EB" modified="2015-12-09" version="1">MRERQQLDDGINGVKGLEQELADNIELIELGEMEDDKSVVEDAEEALRGLKDKVNQLQLNSLLSGEADGNDTYLEINSGAGGTESQDWASMLLRMYRRWAEKRGYKVELLEYHDGEEAGIKSATLLIKGENAYGWLKTESGVHRLVRISPYDSNARRHTSFSSAWVYPVIDDSIEIDVNESDCRIDTYRASGAGGQHVNTTDSAVRITHQPTGIVVQCQSERSQHKNRATAWGMLKARLYEAELKKREEAANAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVQSTSPDDVLDGSLDSFMEAALAQRVFGGDEVVVEDIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFR1</accession>
    <name>A0A0M7AFR1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">NADH-quinone oxidoreductase subunit M</fullName>
            <ecNumber evidence="7">1.6.5.11</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">nuoM</name>
        <name evidence="7" type="ORF">LAX5112_03477</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 3">Membrane</location>
            <topology evidence="1 3">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the complex I subunit 4 family.</text>
    </comment>
    <dbReference type="EC" id="1.6.5.11" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73256.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672868.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03477"/>
    <dbReference type="EnsemblBacteria" id="CTQ73256">
        <property type="protein sequence ID" value="CTQ73256"/>
        <property type="gene ID" value="LAX5112_03477"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008137">
        <property type="term" value="F:NADH dehydrogenase (ubiquinone) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042773">
        <property type="term" value="P:ATP synthesis coupled electron transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000260">
        <property type="entry name" value="NADH4_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010227">
        <property type="entry name" value="NADH_Q_OxRdtase_chainM/4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003918">
        <property type="entry name" value="NADH_UbQ_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001750">
        <property type="entry name" value="ND/Mrp_mem"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43507">
        <property type="entry name" value="PTHR43507"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01059">
        <property type="entry name" value="Oxidored_q5_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00361">
        <property type="entry name" value="Proton_antipo_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01437">
        <property type="entry name" value="NUOXDRDTASE4"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01972">
        <property type="entry name" value="NDH_I_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="6"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="37"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="86"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="113"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="137"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="169"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="211"/>
            <end position="233"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="245"/>
            <end position="265"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="277"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="303"/>
            <end position="322"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="334"/>
            <end position="352"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="373"/>
            <end position="394"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="406"/>
            <end position="429"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="454"/>
            <end position="474"/>
        </location>
    </feature>
    <feature type="domain" description="Oxidored_q5_N" evidence="6">
        <location>
            <begin position="70"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="domain" description="Proton_antipo_M" evidence="5">
        <location>
            <begin position="133"/>
            <end position="420"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009025"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU000320"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00361"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF01059"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ73256.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="505" mass="55855" checksum="DC6FE30A0B2EDB3D" modified="2015-12-09" version="1">MIDWPILSLTTFLPLLGVVFVLMVSGNDDQAKGQMRMVALVTTGMTFGLSLVIWAFFDYSNPGFQFVEERDWLGSNISYKMGVDGISLLFVVLTAFLMPFCILASWKSVQNRVREYMVAFLILETLMIGVFCALDIVVFYVFFEAGLIPMFLIIGVWGGARRVYASYKFFLYTLLGSVLMLVAIMAMYWTAGTTDIQELLVYQFPPEMQTWLWIAFFASFAVKMPMWPVHTWLPDAHVEAPTAGSVILAGVLLKLGGYGFLRFSLPMFPLASDMFAPLVYTLSVVAIIYTSLVALAQEDIKKLIAYSSVAHMGYVTLGIFTMTPQGVQGGIFQMLSHGIVSGALFLCVGVIYDRMHTREISAYGGLVNRMPKYAVAFLIFTMANVGLPGTSGFVGEILVLMGAFQVNTWVAVFATSGVILSACYALYLYRRVVFGSLDKESLKSILDLDLREKVILVPMIILTIFFGFYPMAILDVTQGSVDNLINQYTAALEAAGITQHAATAH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFX9</accession>
    <name>A0A0M7AFX9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Glycerol-3-phosphate regulon repressor</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">glpR_2</name>
        <name evidence="4" type="ORF">LAX5112_03216</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72534.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672647.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03216"/>
    <dbReference type="EnsemblBacteria" id="CTQ72534">
        <property type="protein sequence ID" value="CTQ72534"/>
        <property type="gene ID" value="LAX5112_03216"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014036">
        <property type="entry name" value="DeoR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001034">
        <property type="entry name" value="DeoR_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037171">
        <property type="entry name" value="NagB/RpiA_transferase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00455">
        <property type="entry name" value="DeoRC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08220">
        <property type="entry name" value="HTH_DeoR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00037">
        <property type="entry name" value="HTHLACR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00420">
        <property type="entry name" value="HTH_DEOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100950">
        <property type="entry name" value="SSF100950"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51000">
        <property type="entry name" value="HTH_DEOR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH deoR-type" evidence="3">
        <location>
            <begin position="2"/>
            <end position="57"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51000"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ72534.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="257" mass="27960" checksum="3F0C6F9F35825D44" modified="2015-12-09" version="1">MLIERHNAILELARQMGRVSVDDLAKRFEVSPQTIRKDLNELCERRLLARTHGGALLSSGIENVGYEARRIISSKEKADIGSSVAALIPDNASIFINIGTTTEAVAQALLQHHGLMVITNNLNVASLMRGYSQIEVVVAGGVLRHADGGIVGEAAVDFMRQFKVDFAVIGASAIDPDGSLLDYDYREVKVTKTIMENARHVILAADSTKFERTAPVRVGHLSQVTTLVTDRCPSPEFATIARDSDTQLIETENLPAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGS2</accession>
    <name>A0A0M7AGS2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Magnesium protoporphyrin O-methyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03655</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73781.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672998.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03655"/>
    <dbReference type="EnsemblBacteria" id="CTQ73781">
        <property type="protein sequence ID" value="CTQ73781"/>
        <property type="gene ID" value="LAX5112_03655"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041698">
        <property type="entry name" value="Methyltransf_25"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13649">
        <property type="entry name" value="Methyltransf_25"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Methyltransf_25" evidence="1">
        <location>
            <begin position="62"/>
            <end position="152"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13649"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73781.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="209" mass="22616" checksum="69E1D84BDA5C9A04" modified="2015-12-09" version="1">MAERNPLLEHALSLNGDPLAIREFYANWVQTYDTDLLLAIGYVAPQVAAEALIRHLSDGKLVLDAGCGTGLVGLELLKLDYELTIDGIDLTPEMLAASRKSGAYRKLNEANMCGPMHEIDDDSYDGIVSAGVFTSGHVGPDGLDALIRIAKPGAPIVFTVRDTTWDAEGFVSKIEQLETDGVVRIVGIQLSPYHTKEDVFCQLCVLEVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHK6</accession>
    <name>A0A0M7AHK6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03925</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74625.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008194774.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74625">
        <property type="protein sequence ID" value="CTQ74625"/>
        <property type="gene ID" value="LAX5112_03925"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ74625.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="70" mass="8068" checksum="CE15A58A4CC37138" modified="2015-12-09" version="1">MTLFWPYYGIGALPSGSNSNRARRARLRDLEARMETFLVEKENKQEVCTRVLGNVKECKTRLRGELAHLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHZ4</accession>
    <name>A0A0M7AHZ4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">GIY-YIG nuclease superfamily protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03745</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74062.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673070.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74062">
        <property type="protein sequence ID" value="CTQ74062"/>
        <property type="gene ID" value="LAX5112_03745"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1440.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000305">
        <property type="entry name" value="GIY-YIG_endonuc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035901">
        <property type="entry name" value="GIY-YIG_endonuc_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01541">
        <property type="entry name" value="GIY-YIG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00465">
        <property type="entry name" value="GIYc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82771">
        <property type="entry name" value="SSF82771"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50164">
        <property type="entry name" value="GIY_YIG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GIY-YIG" evidence="1">
        <location>
            <begin position="1"/>
            <end position="78"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50164"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74062.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="95" mass="11476" checksum="5B632277122C8819" modified="2015-12-09" version="1">MSSCVYIMASKPNGTLYTGVTNDLARRVYEHRTGQTPGFTTRYACKLLVWYERHDRIERAIQREKTIKHYVRKWKINLIEEMNPEWNDLYETLNY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AI39</accession>
    <name>A0A0M7AI39_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">NADH dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03546</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73443.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672909.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03546"/>
    <dbReference type="EnsemblBacteria" id="CTQ73443">
        <property type="protein sequence ID" value="CTQ73443"/>
        <property type="gene ID" value="LAX5112_03546"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032981">
        <property type="term" value="P:mitochondrial respiratory chain complex I assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007763">
        <property type="entry name" value="NDUFA12"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12910">
        <property type="entry name" value="PTHR12910"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05071">
        <property type="entry name" value="NDUFA12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="88"/>
            <end position="128"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73443.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="128" mass="15040" checksum="DF632F49F50E43F5" modified="2015-12-09" version="1">MKKLLLEIFTWWNGHTMGTRFFTWRKGEFVGEDEFGNKYYKERDGKKRWVLYNGLAEASSIPPGWHGWMHHRVDTAPIDENYHAKSWQKPHEANHTGTPEAYRPHGSILTPEKRPEVTGDYQAWTPGQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AI57</accession>
    <name>A0A0M7AI57_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Helix-turn-helix domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03989</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74825.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673281.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74825">
        <property type="protein sequence ID" value="CTQ74825"/>
        <property type="gene ID" value="LAX5112_03989"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001845">
        <property type="entry name" value="HTH_ArsR_DNA-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00778">
        <property type="entry name" value="HTHARSR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00418">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50987">
        <property type="entry name" value="HTH_ARSR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH arsR-type" evidence="1">
        <location>
            <begin position="1"/>
            <end position="95"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50987"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74825.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="122" mass="13336" checksum="3761095B89AA16E8" modified="2015-12-09" version="1">MDTNFALGAFGALSQKTRLDVFRLLIKAGPDGMNSGEIGEVLGVRQNTMSANLSVLLQAGLVKNEREGRSIRYFANMDRTRDLLTFLLADCCGGHPDLCAQVMDIVTCQTETTSIEDHREGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIM3</accession>
    <name>A0A0M7AIM3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF4062 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03600</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73623.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672955.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ73623">
        <property type="protein sequence ID" value="CTQ73623"/>
        <property type="gene ID" value="LAX5112_03600"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025139">
        <property type="entry name" value="DUF4062"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13271">
        <property type="entry name" value="DUF4062"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF4062" evidence="1">
        <location>
            <begin position="6"/>
            <end position="97"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13271"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73623.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="290" mass="33330" checksum="944B7C426BE26891" modified="2015-12-09" version="1">MAAPSIFVSSTFVDLQHLREHLEKFIANFGYTPIMFEFGGIGFDYEKPIDVSCYDEVEQSDMFILVIGGRYGSPATDAVKGKSKTYLSITRKEYEAAINSGKPVFTFVEASVLNERRTYNKNKGNQTIVYASVDDTQIFDFIDDIYGKKKNNFIKSFSSLDEITAELRSQWAGIVKRAVNAKTSLDSGERIRLNSFKLFFYRHRRGMSQREISRELNIPVNEFQKLERVRFNKKKSTVTTTPISPFVIGLCFGIWKKHCKCRENWRQVSSMTLQQCLWSSMQTTGERKPG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIN2</accession>
    <name>A0A0M7AIN2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">HAD hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03885</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74507.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673190.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03885"/>
    <dbReference type="EnsemblBacteria" id="CTQ74507">
        <property type="protein sequence ID" value="CTQ74507"/>
        <property type="gene ID" value="LAX5112_03885"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.240">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023198">
        <property type="entry name" value="PGP-like_dom2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ74507.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="234" mass="26374" checksum="5E5765F759FBBD5B" modified="2015-12-09" version="1">MREKITTLGFDADDTLWHNEHLFRLTEDRFAELLAEYTDPQGLKDRLLNAEKRNILHYGYGIKSFTLSMIETAIEVTDRRVPASVVSQILEAGREILSEPATPLPYVLETLKAVKDHYRLVMITKGDLFDQERKATGSGLDRYFDALEIVSEKTPETYETLFRRHGTGAQEAMMIGNSLKSDVLPALAAGSYGTHVPFGQTRALEEADVPETSDRFYQIDHIGKVPELLARITA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIN7</accession>
    <name>A0A0M7AIN7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 5">Malonyl CoA-acyl carrier protein transacylase</fullName>
            <ecNumber evidence="2 5">2.3.1.39</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">fabD</name>
        <name evidence="8" type="ORF">LAX5112_03867</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 5">
            <text>holo-[ACP] + malonyl-CoA = CoA + malonyl-[ACP]</text>
            <dbReference type="Rhea" id="RHEA:41792"/>
            <dbReference type="Rhea" id="RHEA-COMP:9623"/>
            <dbReference type="Rhea" id="RHEA-COMP:9685"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57384"/>
            <dbReference type="ChEBI" id="CHEBI:64479"/>
            <dbReference type="ChEBI" id="CHEBI:78449"/>
            <dbReference type="EC" id="2.3.1.39"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the fabD family.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.39" evidence="2 5"/>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74451.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673175.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03867"/>
    <dbReference type="EnsemblBacteria" id="CTQ74451">
        <property type="protein sequence ID" value="CTQ74451"/>
        <property type="gene ID" value="LAX5112_03867"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004314">
        <property type="term" value="F:[acyl-carrier-protein] S-malonyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.366.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001227">
        <property type="entry name" value="Ac_transferase_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014043">
        <property type="entry name" value="Acyl_transferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016035">
        <property type="entry name" value="Acyl_Trfase/lysoPLipase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024925">
        <property type="entry name" value="Malonyl_CoA-ACP_transAc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004410">
        <property type="entry name" value="Malonyl_CoA-ACP_transAc_FabD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016036">
        <property type="entry name" value="Malonyl_transacylase_ACP-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00698">
        <property type="entry name" value="Acyl_transf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000446">
        <property type="entry name" value="Mct"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00827">
        <property type="entry name" value="PKS_AT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52151">
        <property type="entry name" value="SSF52151"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55048">
        <property type="entry name" value="SSF55048"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00128">
        <property type="entry name" value="fabD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 8" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5 8" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PKS_AT" evidence="7">
        <location>
            <begin position="6"/>
            <end position="304"/>
        </location>
    </feature>
    <feature type="active site" evidence="6">
        <location>
            <position position="94"/>
        </location>
    </feature>
    <feature type="active site" evidence="6">
        <location>
            <position position="203"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00013258"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00018953"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRNR" id="PIRNR000446"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR000446-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="SMART" id="SM00827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ74451.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="314" mass="32342" checksum="94F190C7BC186367" modified="2015-12-09" version="1">MTTAFTFPGQGSQAVGMGKLLADTFPEAKAVFDEVDDALDQKLSDIMWNGPEGDLTLTANAQPALMAVSLATMRVLEAKGLDLKASVSFVAGHSLGEYSALAAAGSLDVATAAKLLRVRGNAMQNAVPVGQGAMAALLGLDFEAAAEIAKDAAQGEVCQAANDNAPGQVVVSGHVAAVERAVEIAKARGARRAVLLPVSAPFHCSLMGPAAEAMAEALTNADIKAPVVPLVANVLATPITDPVDIRDRLVEQVTGTVRWRESISWLAGEGVDTFVEVGTGKVLTGMVKRIAKEASGMAINSPDDIDAVIEKLSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJK6</accession>
    <name>A0A0M7AJK6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Amidophosphoribosyltransferase</fullName>
            <shortName evidence="5">ATase</shortName>
            <ecNumber evidence="5">2.4.2.14</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Glutamine phosphoribosylpyrophosphate amidotransferase</fullName>
            <shortName evidence="5">GPATase</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5 10" type="primary">purF</name>
        <name evidence="10" type="ORF">LAX5112_03858</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5 6">
            <text>5-phospho-beta-D-ribosylamine + diphosphate + L-glutamate = 5-phospho-alpha-D-ribose 1-diphosphate + H2O + L-glutamine</text>
            <dbReference type="Rhea" id="RHEA:14905"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:58017"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="ChEBI" id="CHEBI:58681"/>
            <dbReference type="EC" id="2.4.2.14"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="5 8">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="5 8">Binds 1 Mg(2+) ion per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="1 5 6">Purine metabolism; IMP biosynthesis via de novo pathway; N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-alpha-D-ribose 1-diphosphate: step 1/2.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 5 6">In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.4.2.14" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74420.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673169.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03858"/>
    <dbReference type="EnsemblBacteria" id="CTQ74420">
        <property type="protein sequence ID" value="CTQ74420"/>
        <property type="gene ID" value="LAX5112_03858"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00074">
        <property type="reaction ID" value="UER00124"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004044">
        <property type="term" value="F:amidophosphoribosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006189">
        <property type="term" value="P:'de novo' IMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006541">
        <property type="term" value="P:glutamine metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009113">
        <property type="term" value="P:purine nucleobase biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00715">
        <property type="entry name" value="GPATase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd06223">
        <property type="entry name" value="PRTases_typeI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2020">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01931">
        <property type="entry name" value="PurF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017932">
        <property type="entry name" value="GATase_2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029055">
        <property type="entry name" value="Ntn_hydrolases_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000836">
        <property type="entry name" value="PRibTrfase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029057">
        <property type="entry name" value="PRTase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005854">
        <property type="entry name" value="PurF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035584">
        <property type="entry name" value="PurF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00156">
        <property type="entry name" value="Pribosyltran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000485">
        <property type="entry name" value="Amd_phspho_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53271">
        <property type="entry name" value="SSF53271"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56235">
        <property type="entry name" value="SSF56235"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01134">
        <property type="entry name" value="purF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51278">
        <property type="entry name" value="GATASE_TYPE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0315">Glutamine amidotransferase</keyword>
    <keyword evidence="5 6 10" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="5 8" id="KW-0460">Magnesium</keyword>
    <keyword evidence="5 8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4 5 6" id="KW-0658">Purine biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 5 6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glutamine amidotransferase type-2" evidence="9">
        <location>
            <begin position="22"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="5 7">
        <location>
            <position position="22"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5 8">
        <location>
            <position position="304"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5 8">
        <location>
            <position position="366"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5 8">
        <location>
            <position position="367"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005209"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010138"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRNR" id="PIRNR000485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR000485-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR000485-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51278"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ74420.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="490" mass="53497" checksum="859EA68C37C5FE7A" modified="2015-12-09" version="1">MTGATDFHEPFDINDDTLREECGVFGILGHEDASALTALGLHALQHRGQEAAGIVTFDNEQFRAERHLGLVGDHFSDAETIGRLTGRAAIGHVRYSTTGETILRNVQPLFAELEGGGIAICHNGNFTNALTLRQQLIRDGAICQSTSDSEVVLQLVARSREQKIVDRFVEAITQMEGAYALVALTSKKLIGARDPLGIRPLVLGDLNGAPILASETCALDIIGAKFIRDVENGEVIVCTSTGIQSFFPFGKCPARPDIFEYVYFSRPDSIVGGRSVYDVRRDMGRELARESHVDADVIVPVPDSGVPAAIGYSQESGIPFELGIIRNHYVGRTFIEPTQQIRALGVKMKHSANRSQIEGKRVVLVDDSLVRGTTSVKIVQMIRDAGAKEVHFRLASPPIKHSDYYGIDTPVREKLLAAKYGLDEMCNYIGADSLAFLSVDGIYRAAGYDGRDNENPQFTDHCFTGDYPTPLTDLSEDQDFVSAPRLVEVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJV1</accession>
    <name>A0A0M7AJV1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Galactose-binding protein regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">gbpR</name>
        <name evidence="3" type="ORF">LAX5112_03950</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74722.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008190966.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03950"/>
    <dbReference type="EnsemblBacteria" id="CTQ74722">
        <property type="protein sequence ID" value="CTQ74722"/>
        <property type="gene ID" value="LAX5112_03950"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019619">
        <property type="term" value="P:3,4-dihydroxybenzoate catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045893">
        <property type="term" value="P:positive regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012787">
        <property type="entry name" value="TF_PcaQ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00039">
        <property type="entry name" value="HTHLYSR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02424">
        <property type="entry name" value="TF_pcaQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="6"/>
            <end position="63"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ74722.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="306" mass="33646" checksum="0EB434B6E820BA31" modified="2015-12-09" version="1">MIDRRIKFRHIQCFVEIAQERSLKLAADKLNLTQPAISKTLKELEETIGATLMSRSRAGISLTPQGKMFLHFAQISLASLQQGLDGVVDAGEEARATLTVGALPSVSGSFLPAAIREFRDLAPAVMLKILDGPHGYLIERLRLGEIDLVIGRLGRPVTMEGVSFTQLYSERVEFVVRADHPLLEAPDIKRIVDWPVLYPPEGSAIRPLVERYLIANGVAEIPNRIETVSGAFGRIYTRQSDAVWIISSGVVRNETADGDLIRLPFESDITKGPIGLMTRPDAQPSPAEQVFRLAVQTAIENLELSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJX4</accession>
    <name>A0A0M7AJX4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Cysteine-rich secretory protein family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04004</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74851.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04004"/>
    <dbReference type="EnsemblBacteria" id="CTQ74851">
        <property type="protein sequence ID" value="CTQ74851"/>
        <property type="gene ID" value="LAX5112_04004"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.33.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014044">
        <property type="entry name" value="CAP_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035940">
        <property type="entry name" value="CAP_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00188">
        <property type="entry name" value="CAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55797">
        <property type="entry name" value="SSF55797"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SCP" evidence="1">
        <location>
            <begin position="55"/>
            <end position="169"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00188"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74851.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="179" mass="18964" checksum="D94C7B4A2DEE8F85" modified="2015-12-09" version="1">MRATARRSLSRFLLIPIGLAALGLSACMGDRLQTPPFYQDLAKTDGQVDQATAAQMISQYRINNGLAAVTPDPRLTSIAQTQANAMASAGTVQASLASNLQLETRMAAIGEPKTAASENVSAGYRTFAEAFSGWRESPKHNEVLLAKSATRLGIATAYSANAKHKVFWSLVLAAPAPTQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJX5</accession>
    <name>A0A0M7AJX5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">UDP-N-acetyl-D-glucosamine 6-dehydrogenase</fullName>
            <ecNumber evidence="5">1.1.1.136</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">wbpA</name>
        <name evidence="5" type="ORF">LAX5112_04246</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="3">Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.136" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75465.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673481.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000021.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04246"/>
    <dbReference type="EnsemblBacteria" id="CTQ75465">
        <property type="protein sequence ID" value="CTQ75465"/>
        <property type="gene ID" value="LAX5112_04246"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016628">
        <property type="term" value="F:oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047004">
        <property type="term" value="F:UDP-N-acetylglucosamine 6-dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000271">
        <property type="term" value="P:polysaccharide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008927">
        <property type="entry name" value="6-PGluconate_DH-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017476">
        <property type="entry name" value="UDP-Glc/GDP-Man"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014027">
        <property type="entry name" value="UDP-Glc/GDP-Man_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036220">
        <property type="entry name" value="UDP-Glc/GDP-Man_DH_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014026">
        <property type="entry name" value="UDP-Glc/GDP-Man_DH_dimer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001732">
        <property type="entry name" value="UDP-Glc/GDP-Man_DH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028359">
        <property type="entry name" value="UDP_ManNAc/GlcNAc_DH"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00984">
        <property type="entry name" value="UDPG_MGDP_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03720">
        <property type="entry name" value="UDPG_MGDP_dh_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03721">
        <property type="entry name" value="UDPG_MGDP_dh_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF500136">
        <property type="entry name" value="UDP_ManNAc_DH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000124">
        <property type="entry name" value="UDPglc_GDPman_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00984">
        <property type="entry name" value="UDPG_MGDP_dh_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48179">
        <property type="entry name" value="SSF48179"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52413">
        <property type="entry name" value="SSF52413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03026">
        <property type="entry name" value="NDP-sugDHase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0520">NAD</keyword>
    <keyword evidence="1 5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="UDPG_MGDP_dh_C" evidence="4">
        <location>
            <begin position="320"/>
            <end position="420"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRNR" id="PIRNR000124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ75465.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="427" mass="46188" checksum="3972CE4CDD7241E6" modified="2015-12-09" version="1">MRNRTPAQAKIAVIGLGYVGLPLAAEFGKTHAVMGFDINPERIAQLTEGTDTTLEVSKDDLTAATHLRFTSDPQDLAECDTFIVTVPTPIDAYKQPDLGPLLRASETIGKVLKPGDLVIYESTVYPGATEEDCVPVLVRVSGLVFNEDFFAGYSPERINPGDKSHRLPQICKVTSGSTPEAADFVDELYAGIVTAGTHKAPSIRVAEAAKVIENTQRDLNIALINELAIIFNRLDIDTEAVLKAAGTKWNFLPFRPGLVGGHCIGVDPYYLTHKAQATGYHPEIILAGRRLNDGMGAYVVSEMVKAMTRKALPVTGSRILVMGLAFKENCPDLRNTGVAGILAELKDYNVSVDVHDPWVDGEAAHEEYGIKPVESPAEGAYDAIIVAVAHQAFKDLGVDKIRAFGKPGALVYDLKCMFPAEETDLRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AL08</accession>
    <name>A0A0M7AL08_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Methylthioribose-1-phosphate isomerase</fullName>
            <shortName evidence="2">M1Pi</shortName>
            <shortName evidence="2">MTR-1-P isomerase</shortName>
            <ecNumber evidence="2">5.3.1.23</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="2">S-methyl-5-thioribose-1-phosphate isomerase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3" type="primary">mtnA_2</name>
        <name evidence="2" type="synonym">mtnA</name>
        <name evidence="3" type="ORF">LAX5112_04195</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>S-methyl-5-thio-alpha-D-ribose 1-phosphate = S-methyl-5-thio-D-ribulose 1-phosphate</text>
            <dbReference type="Rhea" id="RHEA:19989"/>
            <dbReference type="ChEBI" id="CHEBI:58533"/>
            <dbReference type="ChEBI" id="CHEBI:58548"/>
            <dbReference type="EC" id="5.3.1.23"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Amino-acid biosynthesis; L-methionine biosynthesis via salvage pathway; L-methionine from S-methyl-5-thio-alpha-D-ribose 1-phosphate: step 1/6.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the EIF-2B alpha/beta/delta subunits family. MtnA subfamily.</text>
    </comment>
    <dbReference type="EC" id="5.3.1.23" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75347.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673445.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04195"/>
    <dbReference type="EnsemblBacteria" id="CTQ75347">
        <property type="protein sequence ID" value="CTQ75347"/>
        <property type="gene ID" value="LAX5112_04195"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00904">
        <property type="reaction ID" value="UER00874"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046523">
        <property type="term" value="F:S-methyl-5-thioribose-1-phosphate isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019509">
        <property type="term" value="P:L-methionine salvage from methylthioadenosine"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019284">
        <property type="term" value="P:L-methionine salvage from S-adenosylmethionine"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.420">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10470">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01678">
        <property type="entry name" value="Salvage_MtnA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000649">
        <property type="entry name" value="IF-2B-related"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005251">
        <property type="entry name" value="IF-M1Pi"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042529">
        <property type="entry name" value="IF_2B-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011559">
        <property type="entry name" value="Initiation_fac_2B_a/b/d"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027363">
        <property type="entry name" value="M1Pi_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037171">
        <property type="entry name" value="NagB/RpiA_transferase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01008">
        <property type="entry name" value="IF-2B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100950">
        <property type="entry name" value="SSF100950"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00524">
        <property type="entry name" value="eIF-2B_rel"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00512">
        <property type="entry name" value="salvage_mtnA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="1 2 3" id="KW-0413">Isomerase</keyword>
    <keyword evidence="2" id="KW-0486">Methionine biosynthesis</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Substrate binding" evidence="2">
        <location>
            <begin position="53"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="2">
        <location>
            <begin position="254"/>
            <end position="255"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="2">
        <location>
            <position position="244"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="90"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="203"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="site" description="Transition state stabilizer" evidence="2">
        <location>
            <position position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01678"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ75347.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="368" mass="39616" checksum="5EDC044F7A4E733A" modified="2015-12-09" version="1">MNVDGEKYRTIWLADDGVTVEIIDQTKFPFIFETVQLRTMAQAAHAIRVMQVRGAPLIGATAAYGVALAMHEDPSDVSLLAACTVLLETRPTAVNLNWALERCRRSLIKVPPENRAEAAYALANEICDEDIAINLSIGMHGMELIAALTKTKRPGEPINILTHCNAGWLATVDWGTATAPIYMAHDGGIPVHVWVDETRPRNQGAFLTAWELGHHGVPHTVIADNAGGHLMQHGEVDIVITGTDRTTATGDVCNKIGTYLKALAAKDNNVPFYVALPSPTIDFSLSDGVREIPIEERNGGEVSWITGRTSSGALETVQIVAEGSEVGNPAFDVTPAHLVTGLITERGVLEASRQAIAHAFPERVKKSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALE2</accession>
    <name>A0A0M7ALE2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Post-segregation antitoxin (Ccd killing mechanism protein) encoded by the F plasmid</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04251</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75477.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673485.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000021.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75477">
        <property type="protein sequence ID" value="CTQ75477"/>
        <property type="gene ID" value="LAX5112_04251"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009956">
        <property type="entry name" value="Post-segregation_anti-tox_CcdA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07362">
        <property type="entry name" value="CcdA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-1277">Toxin-antitoxin system</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022649"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75477.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="84" mass="9161" checksum="090991A30C98A6B0" modified="2015-12-09" version="1">METAARRSACLRLNAETLDQAKELGINVTAVAEDALEKAISAMKCRIWLEENADAFDAQREWHEQNGHPLADIIAGPAGAAWKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="32" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AM24</accession>
    <name>A0A0M7AM24_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 15">Cytochrome b</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="19" type="primary">fbcH_2</name>
        <name evidence="19" type="ORF">LAX5112_04171</name>
    </gene>
    <organism evidence="19 20">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="20" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="20">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 15">Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="15">
            <name>heme b</name>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
        </cofactor>
        <text evidence="15">Binds 2 heme groups non-covalently.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="14">
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </cofactor>
        <text evidence="14">Binds 2 heme groups non-covalently.</text>
    </comment>
    <comment type="subunit">
        <text evidence="15">The main subunits of complex b-c1 are: cytochrome b, cytochrome c1 and the Rieske protein.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="15">Belongs to the cytochrome b family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75280.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008195181.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04171"/>
    <dbReference type="EnsemblBacteria" id="CTQ75280">
        <property type="protein sequence ID" value="CTQ75280"/>
        <property type="gene ID" value="LAX5112_04171"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045275">
        <property type="term" value="C:respiratory chain complex III"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008121">
        <property type="term" value="F:ubiquinol-cytochrome-c reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022904">
        <property type="term" value="P:respiratory electron transport chain"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00290">
        <property type="entry name" value="cytochrome_b_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00284">
        <property type="entry name" value="Cytochrome_b_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.810.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005798">
        <property type="entry name" value="Cyt_b/b6_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036150">
        <property type="entry name" value="Cyt_b/b6_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005797">
        <property type="entry name" value="Cyt_b/b6_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027387">
        <property type="entry name" value="Cytb/b6-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030689">
        <property type="entry name" value="Cytochrome_b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016174">
        <property type="entry name" value="Di-haem_cyt_TM"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00032">
        <property type="entry name" value="Cytochrom_B_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00033">
        <property type="entry name" value="Cytochrome_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF038885">
        <property type="entry name" value="COB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81342">
        <property type="entry name" value="SSF81342"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81648">
        <property type="entry name" value="SSF81648"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51003">
        <property type="entry name" value="CYTB_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51002">
        <property type="entry name" value="CYTB_NTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 15" id="KW-0249">Electron transport</keyword>
    <keyword evidence="5 14 15" id="KW-0349">Heme</keyword>
    <keyword evidence="11 14" id="KW-0408">Iron</keyword>
    <keyword evidence="12 16" id="KW-0472">Membrane</keyword>
    <keyword evidence="8 14" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="20" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 15" id="KW-0679">Respiratory chain</keyword>
    <keyword evidence="7 15 16" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="10 16" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4 15" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="42"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="91"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="126"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="160"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="193"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="246"/>
            <end position="263"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="305"/>
            <end position="324"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="336"/>
            <end position="357"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="363"/>
            <end position="389"/>
        </location>
    </feature>
    <feature type="domain" description="CYTB_NTER" evidence="17">
        <location>
            <begin position="13"/>
            <end position="224"/>
        </location>
    </feature>
    <feature type="domain" description="CYTB_CTER" evidence="18">
        <location>
            <begin position="227"/>
            <end position="397"/>
        </location>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="14">
        <location>
            <position position="96"/>
        </location>
        <ligand>
            <name>heme b</name>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
            <label>b562</label>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="14">
        <location>
            <position position="110"/>
        </location>
        <ligand>
            <name>heme b</name>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
            <label>b566</label>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="14">
        <location>
            <position position="197"/>
        </location>
        <ligand>
            <name>heme b</name>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
            <label>b562</label>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="14">
        <location>
            <position position="211"/>
        </location>
        <ligand>
            <name>heme b</name>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
            <label>b566</label>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="216"/>
        </location>
        <ligand>
            <name>a ubiquinone</name>
            <dbReference type="ChEBI" id="CHEBI:16389"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002444"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00013531"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022660"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="PIRSR" id="PIRSR038885-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="PIRSR" id="PIRSR038885-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="RuleBase" id="RU003385"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="PROSITE" id="PS51002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="18">
        <source>
            <dbReference type="PROSITE" id="PS51003"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="EMBL" id="CTQ75280.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="421" mass="47148" checksum="BE4351B94BD92B9F" modified="2015-12-09" version="1">MAGHSEYVPQSAAAKWLESRLPVISLVRGSFVDFPTPKNLNYFWTFGGILFFVLIAQILTGIVLVMHYTASTTAAFDSVEHIMRDVNFGWMLRYLHANGASMFFIAVYIHIFRGLYYGSYKAPREISWILGVIIFLLMMATAFMGYVLPWGQMSFWGATVITNLFSAIPVVGESVVIWLWGGFAVDNPTLTRFFSLHYLLPFMIFGVVLLHVWAFHTTGNNNPTGVQPKTKQDTIPFHPYYTIKDLFAIVVFMILFAYFVFYLPNYLGHADNYIEANPLVTPAHIVPEWYFLPFYAILRAVPDKLGGVVLMFGAIAVLFILPWLDTSKVRSGAYRPLFKQFFWIFAANAVVLGYLGAMPAEGIYVIMSQICTTIYFAYFLIALPLLGFLEKPKPLPASISESVLKGGSGTPVGAAAAPETK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMZ7</accession>
    <name>A0A0M7AMZ7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Esterase, PHB depolymerase family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04359</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75786.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673581.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000023.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04359"/>
    <dbReference type="EnsemblBacteria" id="CTQ75786">
        <property type="protein sequence ID" value="CTQ75786"/>
        <property type="gene ID" value="LAX5112_04359"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ75786.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="398" mass="41984" checksum="A5D3C45C38CE2EF2" modified="2015-12-09" version="1">MRKSVCRSKFPALSLPIFLALGSAAFVTPFMTSTAIAEPLPKLTLAVQETTVSGLSSGAFMSVQLQTAFSSNISGAGIVAGGPYGCAVVQSWWNAFVYYRALKAVGVCMDNAPSAPDPGESLEVMSDNSGNIDPIAGIADDRIYLFHGDADETVHGPTMDALRQVYADLNVPAESIRYVDDVNAGHGFLTAADAENTCPTDPDAAKADLTCGVVACSTTAPDYLNSCEAPQGATEKIEQARDILNWLYGPLAPATAPVNANFKTFDQTLYTNGAAGMGDTGFAYVPTACAEGDPCRLHIALHGCEQTSGQIGEKYARLTQFNRWAESNRIVVLYPQAEVIPGDFFNGFGLAGGNPKGCWDWWGYSSSDFLTKDAPQMAAIANMAEALGAPIAKSSPLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AN81</accession>
    <name>A0A0M7AN81_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Betaine aldehyde dehydrogenase</fullName>
            <ecNumber evidence="8">1.2.1.8</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">betB_4</name>
        <name evidence="8" type="ORF">LAX5112_04568</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="6">Belongs to the aldehyde dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.2.1.8" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000026">
        <property type="protein sequence ID" value="CTQ76359.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673762.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000026.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76359">
        <property type="protein sequence ID" value="CTQ76359"/>
        <property type="gene ID" value="LAX5112_04568"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008802">
        <property type="term" value="F:betaine-aldehyde dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.309.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.605.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016161">
        <property type="entry name" value="Ald_DH/histidinol_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016163">
        <property type="entry name" value="Ald_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016160">
        <property type="entry name" value="Ald_DH_CS_CYS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029510">
        <property type="entry name" value="Ald_DH_CS_GLU"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016162">
        <property type="entry name" value="Ald_DH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015590">
        <property type="entry name" value="Aldehyde_DH_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00171">
        <property type="entry name" value="Aldedh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53720">
        <property type="entry name" value="SSF53720"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00070">
        <property type="entry name" value="ALDEHYDE_DEHYDR_CYS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00687">
        <property type="entry name" value="ALDEHYDE_DEHYDR_GLU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0521">NADP</keyword>
    <keyword evidence="3 6 8" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-0630">Potassium</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aldedh" evidence="7">
        <location>
            <begin position="21"/>
            <end position="473"/>
        </location>
    </feature>
    <feature type="active site" evidence="4">
        <location>
            <position position="250"/>
        </location>
    </feature>
    <feature type="active site" evidence="5">
        <location>
            <position position="284"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022958"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003345"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ76359.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="489" mass="52240" checksum="16270DB269441182" modified="2015-12-09" version="1">MQHYQLFIDGGRCEGSGGQILHTENPATGDTWASFACADPRDVNRAVAAARRALEDPAWRDLTQTQRGKLLFRLAELVEAHAEELGRLETTDSGKLLAETLSQTQYVGDFYRYYAGLADKIEGSVLPIDKPDMHVFTKREPVGVVAAVVPWNAQMFLTATKLGPALAAGCTVVLKASEIAPIPMLEFASLIDQAGFPPGVVSVITGDAENCAIPLTRHPDVDRIAFTGGPETARHVVRNSAESFAVTSLELGGKSPVLVFDDADLDGAANGLIAGNFGASGQSCVAGSRALIQRTVFEELIDKITEKAAHISVGNPLEAATHVGPLCTAAQIEKVKATLNKAREQGAEIRLGGAPLECSGNYMAPTLVACPNPEIETLKVEMFGPVMSLLPFDTEDEAIALANDTPYGLASGIFTRDVARAHRVSSRLRAGICWINTYRAISPIAPFGGFNQSGYGREAGIEAVLDYTRTKTVWINTSGEPMANPFVMR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANR8</accession>
    <name>A0A0M7ANR8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative domain 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04454</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ76066.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04454"/>
    <dbReference type="EnsemblBacteria" id="CTQ76066">
        <property type="protein sequence ID" value="CTQ76066"/>
        <property type="gene ID" value="LAX5112_04454"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029069">
        <property type="entry name" value="HotDog_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003736">
        <property type="entry name" value="PAAI_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006683">
        <property type="entry name" value="Thioestr_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03061">
        <property type="entry name" value="4HBT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54637">
        <property type="entry name" value="SSF54637"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00369">
        <property type="entry name" value="unchar_dom_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="4HBT" evidence="1">
        <location>
            <begin position="43"/>
            <end position="121"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03061"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76066.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="137" mass="14989" checksum="35B7E1B5BE4EBD7C" modified="2015-12-09" version="1">MTLAETSEPIGEFNKHVGFELTEWQRNHACVEVEIDSYHTNVMGVTHGGVLVSALDFACGMAGCYRPPPEPRFYCMTLTLNTNFIAPMRKGLLRAHGRKIGGGRSVFFAEGEIVLPDGTLIATASGAFKLFDRKPKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AP40</accession>
    <name>A0A0M7AP40_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Cysteine rich repeat</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04663</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000028">
        <property type="protein sequence ID" value="CTQ76659.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76659">
        <property type="protein sequence ID" value="CTQ76659"/>
        <property type="gene ID" value="LAX5112_04663"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001893">
        <property type="entry name" value="Cys-rich_GLG1_repeat"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00839">
        <property type="entry name" value="Cys_rich_FGFR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809499" evidence="1">
        <location>
            <begin position="29"/>
            <end position="148"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76659.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="148" mass="15797" checksum="305AB2CE4E2CB37C" modified="2015-12-09" version="1">MQILRLLSTILAIGTFWIFADASTPAHADMMAACKSEIESKCNGVRKGRGRIAACLYAHPNSLSANCASEVEKLSNSRTTKAVIPSGVWKLSGSQYEGDLIKACGGDARKLCPGVSGNNRNLACLYSRSNQISGTCKQTAEAVMKLLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQF0</accession>
    <name>A0A0M7AQF0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04884</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000034">
        <property type="protein sequence ID" value="CTQ77365.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674028.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000034.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77365">
        <property type="protein sequence ID" value="CTQ77365"/>
        <property type="gene ID" value="LAX5112_04884"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="18"/>
            <end position="35"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77365.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="231" mass="26373" checksum="9910EB3AE94191F2" modified="2015-12-09" version="1">MSQEKSAPWDDLTIRTKLFYLLVFGFLIITGYLLLQGENSAGWALGAAALCLLGTRWGDVKKFSINKDGASAELERLVTEANATIEELRGLAVATARNQLAQLSASGRYGGMGRDLKEDIRENILSTLRDLRVSDGDIEHVISVQYPFMHYDYCHRVQTLHGLQADRERDLAWTTFWTEQHSGRGNEPDPDTLEAFLDKHDLLDDAARERLEDYRHFHETQQHRRPDQIPF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQW1</accession>
    <name>A0A0M7AQW1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Arylsulfatase</fullName>
            <ecNumber evidence="4">3.1.6.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">atsA_4</name>
        <name evidence="4" type="ORF">LAX5112_04934</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="PTM">
        <text evidence="1">The conversion to 3-oxoalanine (also known as C-formylglycine, FGly), of a serine or cysteine residue in prokaryotes and of a cysteine residue in eukaryotes, is critical for catalytic activity.</text>
    </comment>
    <dbReference type="EC" id="3.1.6.1" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000036">
        <property type="protein sequence ID" value="CTQ77518.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674077.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000036.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04934"/>
    <dbReference type="EnsemblBacteria" id="CTQ77518">
        <property type="protein sequence ID" value="CTQ77518"/>
        <property type="gene ID" value="LAX5112_04934"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004065">
        <property type="term" value="F:arylsulfatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017850">
        <property type="entry name" value="Alkaline_phosphatase_core_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000917">
        <property type="entry name" value="Sulfatase_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00884">
        <property type="entry name" value="Sulfatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53649">
        <property type="entry name" value="SSF53649"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809547" evidence="2">
        <location>
            <begin position="24"/>
            <end position="528"/>
        </location>
    </feature>
    <feature type="domain" description="Sulfatase" evidence="3">
        <location>
            <begin position="28"/>
            <end position="369"/>
        </location>
    </feature>
    <feature type="modified residue" description="3-oxoalanine (Cys)" evidence="1">
        <location>
            <position position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRSR" id="PIRSR600917-51"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ77518.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="528" mass="59690" checksum="974A563709C56D2B" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AR26</accession>
    <name>A0A0M7AR26_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Formyl-coenzyme A transferase</fullName>
            <ecNumber evidence="1">2.8.3.16</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">frc_3</name>
        <name evidence="1" type="ORF">LAX5112_04443</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.8.3.16" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ76034.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673649.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000024.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04443"/>
    <dbReference type="EnsemblBacteria" id="CTQ76034">
        <property type="protein sequence ID" value="CTQ76034"/>
        <property type="gene ID" value="LAX5112_04443"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033608">
        <property type="term" value="F:formyl-CoA transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1540.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10540">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003673">
        <property type="entry name" value="CoA-Trfase_fam_III"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044855">
        <property type="entry name" value="CoA-Trfase_III_dom3_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023606">
        <property type="entry name" value="CoA-Trfase_III_dom_1_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02515">
        <property type="entry name" value="CoA_transf_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89796">
        <property type="entry name" value="SSF89796"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ76034.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="398" mass="43232" checksum="8366B6EB680F93F4" modified="2015-12-09" version="1">MALNTKKPLDGIRVLDLTRIISGPYCTRLLADCGAEVFKIEPMGGEHMRVKEPLRDGKSTYFGHFNAGKKSIEIDFRSERDLEEIRKLAASCDVVVENFRPGVVQDLGLNYATLSEGREDLVYCSISGFGQEGPRSRHPAYAPILHALSGHDLAAMSYAEDVDKPFRTGIWYADLIGGLFAFSAIQTALIGQLRHGAGQYIDVALMDSMINLLVLEMQEVQTPSSFDRWLATAVKASDGHVIAVPITGRIFERLADLLGHPEWKDDTRFNTQLEREKNWPVLMSLVEEWTRAKPAAEVETALMAAGIPCARYQTVAEAITDEQVTARQLMSEVGSGPGAFKVASLPFQFSGAPLPVGSHVPDVGEHTDAVLGAAGALAGAKVSALNGTNDNAEEARHV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASB8</accession>
    <name>A0A0M7ASB8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Heat-inducible transcription repressor HrcA</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 7" type="primary">hrcA</name>
        <name evidence="7" type="ORF">LAX5112_04820</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the HrcA family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000031">
        <property type="protein sequence ID" value="CTQ77150.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04820"/>
    <dbReference type="EnsemblBacteria" id="CTQ77150">
        <property type="protein sequence ID" value="CTQ77150"/>
        <property type="gene ID" value="LAX5112_04820"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045892">
        <property type="term" value="P:negative regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.390.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.450.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00081">
        <property type="entry name" value="HrcA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029016">
        <property type="entry name" value="GAF-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002571">
        <property type="entry name" value="HrcA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021153">
        <property type="entry name" value="HrcA_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023120">
        <property type="entry name" value="WHTH_transcript_rep_HrcA_IDD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34824">
        <property type="entry name" value="PTHR34824"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01628">
        <property type="entry name" value="HrcA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005485">
        <property type="entry name" value="HrcA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00331">
        <property type="entry name" value="hrcA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 5" id="KW-0678">Repressor</keyword>
    <keyword evidence="3 5" id="KW-0346">Stress response</keyword>
    <keyword evidence="4 5" id="KW-0804">Transcription</keyword>
    <keyword evidence="2 5" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HrcA" evidence="6">
        <location>
            <begin position="110"/>
            <end position="335"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00081"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF01628"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ77150.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="350" mass="38274" checksum="400E3655DA0BE038" modified="2015-12-09" version="1">MSLSDLDRRSREIFRSIVESYLDTGEPVGSRNISRNPNISLSPASIRNVMSDLEHMGLLHSPHTSAGRLPTEIGLRFFVDALLEVGDLTQDERRQIDIQVKASQQTNSAEQVLTEASQLLSGLSMGAGVVLTHKSDMRLKHIEFVRIEPLKALAILVGEDGSVENRVVELPPDLPSSALVEASNYLNSMIQGRTISEIRAELEKVRAADQAELNQLSQKVIDAGLAVWTGEDGVADPGTLIVRGRSNLLSDLDAAEDLERIKLLFDDLENKKDLIQLLGLAEKGEGVRIFIGSENNLFSLSGSSLVVSPYRDSNQRIVGALGVIGPTRLNYSRVIPMVDYTARLVSRILG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AT39</accession>
    <name>A0A0M7AT39_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Aspartyl/Asparaginyl beta-hydroxylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_04966</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000037">
        <property type="protein sequence ID" value="CTQ77586.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674103.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000037.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04966"/>
    <dbReference type="EnsemblBacteria" id="CTQ77586">
        <property type="protein sequence ID" value="CTQ77586"/>
        <property type="gene ID" value="LAX5112_04966"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018193">
        <property type="term" value="P:peptidyl-amino acid modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007803">
        <property type="entry name" value="Asp/Arg/Pro-Hydrxlase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027443">
        <property type="entry name" value="IPNS-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05118">
        <property type="entry name" value="Asp_Arg_Hydrox"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="domain" description="Asp_Arg_Hydrox" evidence="2">
        <location>
            <begin position="147"/>
            <end position="231"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF05118"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ77586.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="276" mass="32183" checksum="FEA2950C03AB2C70" modified="2015-12-09" version="1">MNSKAVRRLLRVIIPLAILFWLVPWIAGIFIVCGLIDFARHKRFDSALIAKYFSGNGLLTWVLSPVNLLFDLISKRHHYRMQLSEFPDEERAEIEEMLQVFKDRQDEILTDLKARMGDKRRGMVFYRWYDEQGDQSIPEFNRNFKYIKTIGVSLFNGQEKTSLHFGPLRLTIRLLYNMTTRQSDEVFIEVNGEKHFWHDDPLFIFDDTIQHRSVNGEDGLRACVFVDVLRPSAFTGLQNVCVKIFNVLLSGINRVFYKNWDMLNKKQDGAAPAAGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ATR2</accession>
    <name>A0A0M7ATR2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Release factor glutamine methyltransferase</fullName>
            <shortName evidence="6">RF MTase</shortName>
            <ecNumber evidence="6">2.1.1.297</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">N5-glutamine methyltransferase PrmC</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">Protein-(glutamine-N5) MTase PrmC</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">Protein-glutamine N-methyltransferase PrmC</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6 9" type="primary">prmC</name>
        <name evidence="9" type="ORF">LAX5112_04824</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2 6">Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 6">
            <text>L-glutaminyl-[peptide chain release factor] + S-adenosyl-L-methionine = H(+) + N(5)-methyl-L-glutaminyl-[peptide chain release factor] + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:42896"/>
            <dbReference type="Rhea" id="RHEA-COMP:10271"/>
            <dbReference type="Rhea" id="RHEA-COMP:10272"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30011"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:61891"/>
            <dbReference type="EC" id="2.1.1.297"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.297" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000032">
        <property type="protein sequence ID" value="CTQ77173.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673981.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000032.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04824"/>
    <dbReference type="EnsemblBacteria" id="CTQ77173">
        <property type="protein sequence ID" value="CTQ77173"/>
        <property type="gene ID" value="LAX5112_04824"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102559">
        <property type="term" value="F:protein-(glutamine-N5) methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0036009">
        <property type="term" value="F:protein-glutamine N-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018364">
        <property type="term" value="P:peptidyl-glutamine methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02126">
        <property type="entry name" value="RF_methyltr_PrmC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002052">
        <property type="entry name" value="DNA_methylase_N6_adenine_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004556">
        <property type="entry name" value="HemK-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040758">
        <property type="entry name" value="PrmC_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019874">
        <property type="entry name" value="Release_fac_Glu-N5_MeTfrase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007848">
        <property type="entry name" value="Small_mtfrase_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05175">
        <property type="entry name" value="MTS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17827">
        <property type="entry name" value="PrmC_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00536">
        <property type="entry name" value="hemK_fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03534">
        <property type="entry name" value="RF_mod_PrmC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00092">
        <property type="entry name" value="N6_MTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 6 9" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 6" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="4 6 9" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PrmC_N" evidence="8">
        <location>
            <begin position="6"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="domain" description="MTS" evidence="7">
        <location>
            <begin position="99"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="region of interest" description="S-adenosyl-L-methionine binding" evidence="6">
        <location>
            <begin position="120"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="6">
        <location>
            <begin position="186"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="143"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="186"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00002551"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02126"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF05175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF17827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ77173.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="280" mass="30450" checksum="CCF5B4A14869CCB9" modified="2015-12-09" version="1">MNTGALYRQIRDQFRTGKLETPELDAKLLVSAALRISVSELLLRESGEVLDAAAGIALEYAAQRLNGKPVGRILGEREFYGRTFRLNHATLEPRPDTETLIETVLKDCDPTRPLTMCDIGTGTGAIAVTLLAELQKAVMVAVDISEDALGCAVSNAENHGVGARFLPVRSDYAAALQHGFDWVISNPPYIRTPVLCELSKEVLQHDPILALDGGADGLEGYRQIVSQAASVLVPGGRIALEIGHDQGEELKNQLRHHGFEAIDIIQDLGRRDRVATARRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZP36</accession>
    <name>A0A0M6ZP36_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00144</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64001.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670165.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00144"/>
    <dbReference type="EnsemblBacteria" id="CTQ64001">
        <property type="protein sequence ID" value="CTQ64001"/>
        <property type="gene ID" value="LAX5112_00144"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019632">
        <property type="entry name" value="DUF2497"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10691">
        <property type="entry name" value="DUF2497"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="129"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="13"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="39"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="65"/>
            <end position="80"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64001.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="254" mass="27778" checksum="146C97C679894062" modified="2015-12-09" version="1">MSQASKAEEPSMEEILASIRRIISDEDSQSADSGNEQTDETPVEAKAEDDMGDASEMSQDDLDKLFDMDGDDDVAEDESADDMAAAMMADAAEDESDAGDDDVLELTEELAVESTDDLDMVDGLAEDLDNVDGDVSFAPDPEPAEDIMAPPEPEAEPEALFEPEEPAIQSKPIPDDLPDVAPEDYLTSAATGHAVHAALDNFSDMLISTKAQTIEEMVRDMLRPMIKAWLDQNLPPMVEQMVKKEVQRVIRRRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPN8</accession>
    <name>A0A0M6ZPN8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00191</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64136.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670194.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00191"/>
    <dbReference type="EnsemblBacteria" id="CTQ64136">
        <property type="protein sequence ID" value="CTQ64136"/>
        <property type="gene ID" value="LAX5112_00191"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="182"/>
            <end position="237"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64136.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="256" mass="26182" checksum="B5015771A1F05352" modified="2015-12-09" version="1">MSAVVGISSPSEDPSPRHVLLKAVEATQKATDATAPAKAGFGFSDFVDVINPLQHIPGVSDVYRALTNDQISEDARHAGRTLYGAALGGPVGIGLMMAYDAMTTPGSGGTALDTLDPEVASVETPRTINAADTSSRDGVDSGVEPMVSGPAPILGETVASAGERTLGTPFNLLQFGELTADAVPAPKPDNKSSAERVPEPGRVSAGVAPGGADQPDTKTVVPSSDDLGRLAEHDSNHLSLDVLKALQERHAKLSAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPP1</accession>
    <name>A0A0M6ZPP1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Putrescine transport system permease protein PotH</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">potH</name>
        <name evidence="7" type="ORF">LAX5112_00380</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64725.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670359.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00380"/>
    <dbReference type="EnsemblBacteria" id="CTQ64725">
        <property type="protein sequence ID" value="CTQ64725"/>
        <property type="gene ID" value="LAX5112_00380"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="93"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="125"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="175"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="218"/>
            <end position="243"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="274"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="89"/>
            <end position="295"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ64725.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="307" mass="34377" checksum="6DD6B540DA42F887" modified="2015-12-09" version="1">MSKAAPKSKRGIGGWGLIAVPYFWLLIFFLAPFLIVFKISLSQVAIAIPPYFPTFDLAEGWQAFREAISELSLENYIWLTEDALYWKSYVSSVYIAAVSTLITLLIGYPIAYGMARSPEAWRPTLLMLVILPFWTSFLIRVYAWIGILKNEGLLNQFLMMLGLIDDPLVILNTNVAVYIGIVYSYLPFLVLPLYASLEKLDGSLLEAAEDLGCPPWKAFWKITVPLSLPGVIAGCFLVFIPAVGEFVIPDLLGGSETLMIGKTLWVEFFNNRDWPVASAVAVILLLILVIPIVLFQNQQQKMAEKNQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQ16</accession>
    <name>A0A0M6ZQ16_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">N-carbamoyl-L-amino acid hydrolase</fullName>
            <ecNumber evidence="5">3.5.1.87</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">amaB</name>
        <name evidence="5" type="ORF">LAX5112_00259</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="3">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="3">Binds 2 Zn(2+) ions per subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase M20 family.</text>
    </comment>
    <dbReference type="EC" id="3.5.1.87" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64331.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670243.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00259"/>
    <dbReference type="EnsemblBacteria" id="CTQ64331">
        <property type="protein sequence ID" value="CTQ64331"/>
        <property type="gene ID" value="LAX5112_00259"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016813">
        <property type="term" value="F:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050538">
        <property type="term" value="F:N-carbamoyl-L-amino-acid hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010158">
        <property type="entry name" value="Amidase_Cbmase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036264">
        <property type="entry name" value="Bact_exopeptidase_dim_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002933">
        <property type="entry name" value="Peptidase_M20"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011650">
        <property type="entry name" value="Peptidase_M20_dimer"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32494">
        <property type="entry name" value="PTHR32494"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07687">
        <property type="entry name" value="M20_dimer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01546">
        <property type="entry name" value="Peptidase_M20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001235">
        <property type="entry name" value="Amidase_carbamoylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55031">
        <property type="entry name" value="SSF55031"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01879">
        <property type="entry name" value="hydantase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="M20_dimer" evidence="4">
        <location>
            <begin position="217"/>
            <end position="313"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="87"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="98"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="133"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="196"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="388"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>2</label>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006153"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR001235-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF07687"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ64331.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="418" mass="45240" checksum="CB9D07C782378241" modified="2015-12-09" version="1">MAAPGENLRINADRLWDSLMEMAKIGPGVAGGNNRQTLTDADSEGRKLFQKWCEDAGMTMGVDTMGNMFMTRPGTDPDALPVYVGSHLDTQPTGGKYDGVLGVLGGLEVVRTMNDLGIKTKHPIVVTNWTNEEGTRFAPAMLASGVFAGIHSLDEAYAKEDHEGLKFGDELKRIGWVGDEEVGARKDKMHAMFELHIEQGPILEAEGKDIGVVTHGQGLSWTQVTITGKDSHTGSTPMPMRKNAGLGMARILDLVDEIAWSHKPHAVGAAGHIDVYPNSRNVIPGKVVFTIDFRSPDINVIAAMEEDMKKGAKKICDMMGLEVEFEKVGGFDPVTFDENCVTAVRNAAERLGYTHQNIISGAGHDACWINKVAPTAMIMCPCVDGLSHNEAEEISKDWAKAGTDVLFHAVVETAEIVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQ50</accession>
    <name>A0A0M6ZQ50_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Nucleoside triphosphate pyrophosphohydrolase</fullName>
            <ecNumber evidence="2">3.6.1.8</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">mazG</name>
        <name evidence="2" type="ORF">LAX5112_00251</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.6.1.8" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64306.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670238.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00251"/>
    <dbReference type="EnsemblBacteria" id="CTQ64306">
        <property type="protein sequence ID" value="CTQ64306"/>
        <property type="gene ID" value="LAX5112_00251"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047693">
        <property type="term" value="F:ATP diphosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004518">
        <property type="entry name" value="MazG_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011551">
        <property type="entry name" value="NTP_PyrPHydrolase_MazG"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30522">
        <property type="entry name" value="PTHR30522"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03819">
        <property type="entry name" value="MazG"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00444">
        <property type="entry name" value="mazG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MazG" evidence="1">
        <location>
            <begin position="30"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="domain" description="MazG" evidence="1">
        <location>
            <begin position="179"/>
            <end position="240"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03819"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64306.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="278" mass="31550" checksum="0C2B1460F1682DDB" modified="2015-12-09" version="1">MIPSCDISRLIEIMAALRTPGTGCPWDLEQNFATIAPYTLEEAYEVADAIAKDDMLELREELGDLLLQVVYHARMAEEEGQFSFPDVVEGITKKMIRRHPHVFGDETGEKPELVKGIWERIKSEERAEKRAEREALGLVEPNKGFLDDVPTAFPALKEADKLQRRASKVGFDWNDARLVLDKIREETHELDEELAKSDPDKERITDELGDTLFALTNLARHLDIDPEEALRRTNRKFRRRFAAIEGVAETNATTLDAMSFEEMEAAWQAAKKPDPAAT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQA1</accession>
    <name>A0A0M6ZQA1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_00295</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64432.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ64432">
        <property type="protein sequence ID" value="CTQ64432"/>
        <property type="gene ID" value="LAX5112_00295"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032809">
        <property type="entry name" value="Put_HupE_UreJ"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13795">
        <property type="entry name" value="HupE_UreJ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809026" evidence="2">
        <location>
            <begin position="27"/>
            <end position="337"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="159"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="188"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="212"/>
            <end position="231"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="243"/>
            <end position="261"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="273"/>
            <end position="303"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ64432.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="337" mass="36983" checksum="F2B37E5BA8EC68CA" modified="2015-12-09" version="1">MTKAFPVAAFVWMALAVWFWPAPASAHSLGVDKAELIETAPGAYELLSKVPQRLASAITTPILPDRCTFEGSPRGERGSYQVLFRFACETALRSDDQLVLPWKRDGTLLTVRWFEQEPHTRLASRQGDAIVVDLGEYLAGSGSIMKAASRYTKLGFEHILEGLDHLLFVFALMIVVRNGWRLVKTITAFTIAHSITLALATLGYVNLPSAPVEATIALSIVFLCVEIVHAARGRISLTYRYPWVVAFAFGLLHGLGFAGALSEIGLPPNEIPIALLFFNIGVELGQLAFVSVILIALNLLAALRFRFPRWAELVPTYVIGTLAMYWTLERTAAIAGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZR14</accession>
    <name>A0A0M6ZR14_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">?-D-glucose-1-phosphatase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00551</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65219.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670489.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00551"/>
    <dbReference type="EnsemblBacteria" id="CTQ65219">
        <property type="protein sequence ID" value="CTQ65219"/>
        <property type="gene ID" value="LAX5112_00551"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.240">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006439">
        <property type="entry name" value="HAD-SF_hydro_IA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041492">
        <property type="entry name" value="HAD_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023198">
        <property type="entry name" value="PGP-like_dom2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13419">
        <property type="entry name" value="HAD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00413">
        <property type="entry name" value="HADHALOGNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01509">
        <property type="entry name" value="HAD-SF-IA-v3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ65219.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="206" mass="23543" checksum="76B6299E5D82C692" modified="2015-12-09" version="1">MASTITNVVFDIGNVLIEWNPENLYRKLIPNDDERHEFLTTVCTPDWNVQQDLGRTWTEAVEVLSREFPDKTALIRAYSDRWHEMVPGPISGAEALLTELKANKTPLYAITNFSSEKFVEAQVRFPFLKTSFLDIVVSAEERMLKPDVRIYQILIDRNDLAPEHCLFIDDSLANVETARQLGMTAHHFKNAAGLERELAALNLIVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRH0</accession>
    <name>A0A0M6ZRH0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Putative ATP-dependent transporter SufC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">sufC</name>
        <name evidence="6" type="ORF">LAX5112_00152</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily. Ycf16 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64023.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670306.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00152"/>
    <dbReference type="EnsemblBacteria" id="CTQ64023">
        <property type="protein sequence ID" value="CTQ64023"/>
        <property type="gene ID" value="LAX5112_00152"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd03217">
        <property type="entry name" value="ABC_FeS_Assembly"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010230">
        <property type="entry name" value="FeS-cluster_ATPase_SufC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43204">
        <property type="entry name" value="PTHR43204"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01978">
        <property type="entry name" value="sufC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="2"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="36"/>
            <end position="43"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006216"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ64023.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="251" mass="27573" checksum="D99843DD9454F089" modified="2015-12-09" version="1">MLEIKNLHARIAEDETEILRGIDLTVNAGEVHAIMGPNGSGKSTLSYILAGKDDYEVTEGEILFNGENMLDMEPDERAAAGMFLAFQYPIEIPGVATMEFLKTAMNAQRKARGEDTLSIPDFMKRVKEAAAHLNVSMDMLKRPLNVGFSGGEKKRAEILQMSLLEPKLCVLDETDSGLDIDALRIVSEGVNKLRGPERAMVVITHYQRLLDHIVPDVVHVLSKGKIVKTGDKDLALELEKNGYADIINAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRQ1</accession>
    <name>A0A0M6ZRQ1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Vitamin B12-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">btuF</name>
        <name evidence="3" type="ORF">LAX5112_00634</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65459.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670589.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00634"/>
    <dbReference type="EnsemblBacteria" id="CTQ65459">
        <property type="protein sequence ID" value="CTQ65459"/>
        <property type="gene ID" value="LAX5112_00634"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002491">
        <property type="entry name" value="ABC_transptr_periplasmic_BD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01497">
        <property type="entry name" value="Peripla_BP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50983">
        <property type="entry name" value="FE_B12_PBP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809042" evidence="1">
        <location>
            <begin position="20"/>
            <end position="311"/>
        </location>
    </feature>
    <feature type="domain" description="Fe/B12 periplasmic-binding" evidence="2">
        <location>
            <begin position="39"/>
            <end position="311"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50983"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ65459.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="311" mass="34438" checksum="6DDDD282967A7F45" modified="2015-12-09" version="1">MTKTLLTGLALTLSVSIAAAETTVQSCDRVVTFDAPPQRAISNDVNLTEMMLVLGLEDRMVGYTGISGWKTLDEEMRAGVQKLPELSSKYPSKEVIIGADADFFFAGWNYGMKVGGEVTPETLEPFGVKVYELTESCTHVMDKDKASIEDMYADLLNLGRIFAVEERAEDLVEGYRSDLAAFKQDLKTAEPLRVFVYDSGEDTPFTAGRYAMPTALIEAAGGKNIMDDFEKSWATVTWEEVVERNPEVVVIVNYGEVTADQKRAFIMSNPAFADLDAVKNDRFVTLEYVEATPGPRNIRAIKTLAEAFWSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZS13</accession>
    <name>A0A0M6ZS13_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Putative aliphatic sulfonates transport permease protein SsuC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ssuC_1</name>
        <name evidence="7" type="ORF">LAX5112_00253</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64314.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670239.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00253"/>
    <dbReference type="EnsemblBacteria" id="CTQ64314">
        <property type="protein sequence ID" value="CTQ64314"/>
        <property type="gene ID" value="LAX5112_00253"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="16"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="40"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="72"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="96"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="127"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="187"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="221"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="250"/>
            <end position="271"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="313"/>
            <end position="335"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="347"/>
            <end position="368"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="184"/>
            <end position="369"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ64314.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="381" mass="41484" checksum="E323D323E77D23CA" modified="2015-12-09" version="1">MSSQTATKRRFDMPALLAWFIVAMVVVGLFSTAFKPDIGILEAPQLALCLVLLAILGVRYELGFMRNWIGDLALGIVAALAASLLIGAAGRHEGDAALGFWALTAATWAAFWLFVERLAIWKSRSLLTTRIVNLAIPAIFGVTLLILWELIVTGAGVPKVLLPAPSEIWLRMTTSVPTLWADFQQTFMKAVLVGYALGCGAGFLIAILVDRVPFLRRGLLPIGNLVSALPIIGVAPIMVMWFGFDWPSKAAVVIIMTFFPMLVNTVSGLAASDAMQRDLMRTYASNYWQTLFKLRLPMAMPFIFNALKINSTLALIGAIVAEFFGTPIVGMGFRISTEVGRMNVDMVWAEIAVAALAGSLFYGLVALLERAVTFWHPSIRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZS60</accession>
    <name>A0A0M6ZS60_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Taurine--pyruvate aminotransferase</fullName>
            <ecNumber evidence="3">2.6.1.77</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">tpa_3</name>
        <name evidence="3" type="ORF">LAX5112_00496</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.6.1.77" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65061.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670447.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00496"/>
    <dbReference type="EnsemblBacteria" id="CTQ65061">
        <property type="protein sequence ID" value="CTQ65061"/>
        <property type="gene ID" value="LAX5112_00496"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008483">
        <property type="term" value="F:transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00610">
        <property type="entry name" value="OAT_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005814">
        <property type="entry name" value="Aminotrans_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00202">
        <property type="entry name" value="Aminotran_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00600">
        <property type="entry name" value="AA_TRANSFER_CLASS_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="1 2" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="3" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU003560"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ65061.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="451" mass="48648" checksum="74DA293FC8CD83D4" modified="2015-12-09" version="1">MSAPTTSHLFYQNRQGRPMLDQARGVYMWDVDGKRYLDGSSGAMVCNIGHSNPRVLEAMRQQMDKATFGYRLHFETEPAERLAARTAELAPSGLDKVFFVSGGSEAVESAIKLARQNAIATGEAQRYKVISREPSYHGCTLGALALTGYAPLTAPFAPMMQPMPKIPAPRAYLDGLDAADPATGHHYADMLEARILEEGPETVLAFIVEPVGGASTGALVPPAGYMPRIREICSRYGVLLIHDEVMSGGGRTGRFFAAEHFDVVPDILVISKGFAAGYAPLGAMVAHTSIVGNVMNTGGFLHGFTYAGNPLACSAGLAVLAEIERQEMCANAARIGQILKLELHKLMDRHELIGDVRGEGLLLAFELVADRNTLAPLPEDWGAFNRLVDIAYANGLIIYSRRTRGGYAGDHFLIAPPMICNEDHVAEIVAGLDRSLKQLEAELPCKPAKAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZS75</accession>
    <name>A0A0M6ZS75_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00494</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65056.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670445.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ65056">
        <property type="protein sequence ID" value="CTQ65056"/>
        <property type="gene ID" value="LAX5112_00494"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="5"/>
            <end position="154"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65056.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="163" mass="17596" checksum="C53090D6FA96E6DE" modified="2015-12-09" version="1">MMEGLSIRKATAADAERLNQALEHLSTELGDTHRASACDLVRQGFEENPAFFALVAEQAASGKVTGALIASPMFSTSLGGAGLYVSDLWISKDARGHGLGQRLLETAITEAPANWTIKFLKLAVHDHNVKARWFYQRLGFKDLPGETVLALKGDALETLRTGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSW8</accession>
    <name>A0A0M6ZSW8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Glutathione transport system permease protein GsiC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">gsiC_1</name>
        <name evidence="8" type="ORF">LAX5112_00611</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="6">Cell membrane</location>
            <topology evidence="6">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65417.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008189665.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00611"/>
    <dbReference type="EnsemblBacteria" id="CTQ65417">
        <property type="protein sequence ID" value="CTQ65417"/>
        <property type="gene ID" value="LAX5112_00611"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045621">
        <property type="entry name" value="BPD_transp_1_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19300">
        <property type="entry name" value="BPD_transp_1_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="100"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="134"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="188"/>
            <end position="207"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="242"/>
            <end position="270"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="290"/>
            <end position="311"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="7">
        <location>
            <begin position="94"/>
            <end position="307"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ65417.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="325" mass="35632" checksum="493C62A2AF62A9BF" modified="2015-12-09" version="1">MSVFVIRRLMQALLVVFLMSVIVFFGVNIVGDPVYMLVSPDADQADIEAAIRRLGLDRPIWDQYLLFLKGAAQGNLGDSFIFGEPALKLILHHMPATLELAFSALMLAIVIGIPLGLFSGLYPDNPISKGIMAGSILGFSLPTFWVGLMLILLFAVELGWLPSTGRGDTATIFGIETSLATWDGLRHIFLPALNLALLKISLAIRLTRAGVREAMSQDYVKYARAKGISTSRIILVHVMKNIMIPVVTVMGLEFGSLIGFSVVTETIFAWPGMGKLLIDAILQLDRPVVVAYLMIMVLFFVVINLVVDILYSILDPRVRLQDQGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTZ7</accession>
    <name>A0A0M6ZTZ7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DNA-binding transcriptional repressor PuuR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00733</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65722.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670665.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ65722">
        <property type="protein sequence ID" value="CTQ65722"/>
        <property type="gene ID" value="LAX5112_00733"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013096">
        <property type="entry name" value="Cupin_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07883">
        <property type="entry name" value="Cupin_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00530">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="1">
        <location>
            <begin position="8"/>
            <end position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65722.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="182" mass="20264" checksum="E762407C703EE381" modified="2015-12-09" version="1">MANLGADLRALRKTKGLTLTELAERLGKSVGWLSQIERGISKLSSEDIDRMAGVFDVPPSLLGSRQGPNPKEDGKIVRASDRRMIGERAPGLVEQLLSPDLTDSFEVIHSTFLPGSERNDEIMRPTQELAFLVSGKLKIWLEGEPFLIRKGDSFRIRGEKYCWANPYSEPAVAVWIISPPVY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZU11</accession>
    <name>A0A0M6ZU11_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Putative aliphatic sulfonates transport permease protein SsuC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ssuC_4</name>
        <name evidence="7" type="ORF">LAX5112_00727</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65706.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670661.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00727"/>
    <dbReference type="EnsemblBacteria" id="CTQ65706">
        <property type="protein sequence ID" value="CTQ65706"/>
        <property type="gene ID" value="LAX5112_00727"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="6"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="47"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="231"/>
            <end position="256"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="268"/>
            <end position="287"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="293"/>
            <end position="312"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="385"/>
            <end position="407"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="227"/>
            <end position="407"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ65706.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="421" mass="45362" checksum="A2184D6B38DE985A" modified="2015-12-09" version="1">MIILFAYIAIFAAAFFIVHFFTLRIVHRNDFTSLKTVTFGDESAVKPNRIASVISVLAVFFIWGAFTGSKLTPIHVPGPYMGTTEFTYTAENAAGETDSATVTVVVHKLGEDVKLPEPAPSSGFAQNDVDSVAAWRSGLIRVNRNDTGREDDGFKITAIDGQPIAVGSPVSVTDGSVALTAKGSLNFTPDKGMQMEPIWLPSPEAVWHRYVEIFGDGYQGITLLDHLGWSLLRVCAGFLLGSLIGIPLGYAMGLSGWFRGWFDPIVEFMRPVPPLALIPLVIIWFGIGESGKIILLFLAALWIMTIAARAGVSGVNISKVHAAYSLGASKSQILWHVIVPNSLPEIFTGARVAMGVCWGTVVAAELVAAEKGAGKMIVAASKFQLTDIVIMGIILIGVIGFAIDVLMRRAENWLVPWKGRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUB3</accession>
    <name>A0A0M6ZUB3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">braC_3</name>
        <name evidence="5" type="ORF">LAX5112_00788</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the leucine-binding protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65877.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670708.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00788"/>
    <dbReference type="EnsemblBacteria" id="CTQ65877">
        <property type="protein sequence ID" value="CTQ65877"/>
        <property type="gene ID" value="LAX5112_00788"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006865">
        <property type="term" value="P:amino acid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028081">
        <property type="entry name" value="Leu-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000709">
        <property type="entry name" value="Leu_Ile_Val-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13458">
        <property type="entry name" value="Peripla_BP_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00337">
        <property type="entry name" value="LEUILEVALBP"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0029">Amino-acid transport</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005808965" evidence="3">
        <location>
            <begin position="23"/>
            <end position="379"/>
        </location>
    </feature>
    <feature type="domain" description="Peripla_BP_6" evidence="4">
        <location>
            <begin position="24"/>
            <end position="373"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010062"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF13458"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ65877.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="379" mass="39997" checksum="C9DD6182192C5973" modified="2015-12-09" version="1">MKVTNTALATLMVLGTVTGAAADIKLGASLSASGPAAFLGDPEAKTLYMLVDDLNAKGGINGEKIELVIYDDGGDPNKARTFATRLVEDDEVVAIIGGSTTGTTMSILSVAEDEGIPFISLAGAIQIIDPVREYVFKTPHTDRMACEKIFTDMQKNGIAKIGMISGTGGFGASMEAQCVDVAGNYDVEILVQETYSRQDADMTPQLTKIKSTDGVEAVLNPGFGQGPAIVTRNYAQLGIDLPLYQSHGVASDGFIELAGKEAAEGVRLPGTALLIADIMEEGDPQKEVVIAYKTAYEEEYGEAVSTFGGYAHDAFRLMTDAMARAGSSDPSAIRDALEATSGMVGTTGTYTFSPDDHLGLDLSAFRMLEIRDGKWTSID</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUN2</accession>
    <name>A0A0M6ZUN2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Aldose 1-epimerase</fullName>
            <ecNumber evidence="3">5.1.3.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">mro</name>
        <name evidence="7" type="ORF">LAX5112_00553</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>alpha-D-glucose = beta-D-glucose</text>
            <dbReference type="Rhea" id="RHEA:10264"/>
            <dbReference type="ChEBI" id="CHEBI:15903"/>
            <dbReference type="ChEBI" id="CHEBI:17925"/>
            <dbReference type="EC" id="5.1.3.3"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1 3">Carbohydrate metabolism; hexose metabolism.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 3">Belongs to the aldose epimerase family.</text>
    </comment>
    <dbReference type="EC" id="5.1.3.3" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65224.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670491.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00553"/>
    <dbReference type="EnsemblBacteria" id="CTQ65224">
        <property type="protein sequence ID" value="CTQ65224"/>
        <property type="gene ID" value="LAX5112_00553"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00242"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004034">
        <property type="term" value="F:aldose 1-epimerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030246">
        <property type="term" value="F:carbohydrate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019318">
        <property type="term" value="P:hexose metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.70.98.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015443">
        <property type="entry name" value="Aldose_1-epimerase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008183">
        <property type="entry name" value="Aldose_1/G6P_1-epimerase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011013">
        <property type="entry name" value="Gal_mutarotase_sf_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014718">
        <property type="entry name" value="GH-type_carb-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01263">
        <property type="entry name" value="Aldose_epim"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005096">
        <property type="entry name" value="GALM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF74650">
        <property type="entry name" value="SSF74650"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="3 7" id="KW-0413">Isomerase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Substrate binding" evidence="6">
        <location>
            <begin position="71"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="6">
        <location>
            <begin position="168"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="4">
        <location>
            <position position="168"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="4">
        <location>
            <position position="298"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="232"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005028"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006206"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRNR" id="PIRNR005096"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR005096-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR005096-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR005096-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ65224.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="331" mass="36595" checksum="E9599CFF24A75841" modified="2015-12-09" version="1">MIQEFGVLPDGTSVEEITLKKGDLEASVLTFGAIIRDLKFAGQSVVLGFDNLQDYLDHSPYFGAIVGRCANRIANGKIAIDGRAYQLDQNDNSHHLHGGSKGFSRRNWQIEQSDKASVLLKLVSEDGDMGYPGRVEALVRYTLTGSGALRVKLSATADQTTPVNLAQHSYFNLDGSDTILDHQLEIAAETYVPVEDHLIPIGQIRSVAWTPYDFQDGRRLRRKSGEEAVIYDHNFCLSDAPRDTVEFAAALEDKSGDRRMEVWTTEPGLQLYDGGKIDVPVPGLAGKNYGAHAGLCLEAQRWPDSVNQKTFTDVLLRPDASYNQVTEFRFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVA7</accession>
    <name>A0A0M6ZVA7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Arabinose operon regulatory protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">araC_1</name>
        <name evidence="4" type="ORF">LAX5112_01068</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66719.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01068"/>
    <dbReference type="EnsemblBacteria" id="CTQ66719">
        <property type="protein sequence ID" value="CTQ66719"/>
        <property type="gene ID" value="LAX5112_01068"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003313">
        <property type="entry name" value="AraC-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037923">
        <property type="entry name" value="HTH-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02311">
        <property type="entry name" value="AraC_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51215">
        <property type="entry name" value="SSF51215"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="3">
        <location>
            <begin position="190"/>
            <end position="285"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ66719.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="291" mass="31740" checksum="2B887727FD0F4A30" modified="2015-12-09" version="1">MGFEERRETTSLGGVAGNGLERLCKIGRDGIRVAPTEAGIERIEANFQGNGFSAHRHDTYAIGVTLQGVQRFKYRGAERASCPGQVIVIHPDEVHDGGAGTETGLRYRMMYIPPEMIAEALGGKALPHVSTPVLTDPVFQRSLIEALQDLDSEMGDLRVSDLQADLASCLNRFSDDARPVRQTLDWPVLKMCAEFIKEHAADPIASADLEAVSGLDRFALSRQFRAAFGTSPHRYLVMRRLEQVKSGLADGECLAAAAGGFADQSHMSRHFKRAFGMSPGKWRQLNAASLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVF6</accession>
    <name>A0A0M6ZVF6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Phosphate-import permease protein PhnE</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">phnE_3</name>
        <name evidence="7" type="ORF">LAX5112_01082</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66759.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451792.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01082"/>
    <dbReference type="EnsemblBacteria" id="CTQ66759">
        <property type="protein sequence ID" value="CTQ66759"/>
        <property type="gene ID" value="LAX5112_01082"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015416">
        <property type="term" value="F:ABC-type phosphonate transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005769">
        <property type="entry name" value="PhnE/PtxC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01097">
        <property type="entry name" value="PhnE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="19"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="89"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="128"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="83"/>
            <end position="268"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ66759.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="282" mass="30445" checksum="E92C0F9699CB8685" modified="2015-12-09" version="1">MAVAAMEEEILSLRKRRQLYSLIGLLLVVAVMVSGYSKSNDMNSGGFLQGLSKFFDYPGEIVVEAWEAGPAFFGLIIQYIPAMLETLNIAAVATLIGGAMAVVLAMASTRNVDSWGPLIPVVRRMMDIMRAFPELIIALFLIFVLGSSPVPAMIAVAFHTAGALGKLFSEVNENIDRKPIEGLSACGANWVQRIRFAVMPQVAPNYLSYFLLRLEINVRASAILGFVGAGGIGQELRRTIGWGQGAGDETAAIFVLLFLTIMIIDQSSSYLRGKLVGSGRAH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWB8</accession>
    <name>A0A0M6ZWB8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01004</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66536.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ66536">
        <property type="protein sequence ID" value="CTQ66536"/>
        <property type="gene ID" value="LAX5112_01004"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66536.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="50" mass="5658" checksum="9C731D890CC1EC3A" modified="2015-12-09" version="1">MLYEVIDTGLLALVMPLAASVLLFGIYLVVKTDMNFERDARSPRQFIKTP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWJ1</accession>
    <name>A0A0M6ZWJ1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative diguanylate cyclase YdaM</fullName>
            <ecNumber evidence="2">2.7.7.65</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ydaM_1</name>
        <name evidence="2" type="ORF">LAX5112_01043</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.7.7.65" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66647.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670930.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01043"/>
    <dbReference type="EnsemblBacteria" id="CTQ66647">
        <property type="protein sequence ID" value="CTQ66647"/>
        <property type="gene ID" value="LAX5112_01043"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052621">
        <property type="term" value="F:diguanylate cyclase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd01949">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000160">
        <property type="entry name" value="GGDEF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00990">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00267">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00254">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50887">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="GGDEF" evidence="1">
        <location>
            <begin position="122"/>
            <end position="263"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66647.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="273" mass="30172" checksum="F29480E21031B37A" modified="2015-12-09" version="1">MTETSRKAETDFTLFDSEDRVLEHASTIIDGLEETTDLIKTLTTAYKRAVKDQKRMVRLCDRMQEELIAVKERLEGEVTARAELAEQFRMQAITDGLTQVFNRGHFLELCNHELKARSRTEAPLSVALLDIDHFKSVNDTYGHAAGDEALRVVARTLENSLRQSDVVCRWGGEEFSLLMPRTNSENASGLADRLRKTLSEIVIKEGGTSFSLTASFGVATMVGPNPACKATGADAIDLLFKDADDALYKAKDAGRNKVITAEARLLETAEAVD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWL3</accession>
    <name>A0A0M6ZWL3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Methyl-accepting chemotaxis protein 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">mcp1</name>
        <name evidence="4" type="ORF">LAX5112_00965</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66430.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00965"/>
    <dbReference type="EnsemblBacteria" id="CTQ66430">
        <property type="protein sequence ID" value="CTQ66430"/>
        <property type="gene ID" value="LAX5112_00965"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035438">
        <property type="term" value="F:cyclic-di-GMP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004089">
        <property type="entry name" value="MCPsignal_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009875">
        <property type="entry name" value="PilZ_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00015">
        <property type="entry name" value="MCPsignal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07238">
        <property type="entry name" value="PilZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00283">
        <property type="entry name" value="MA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50111">
        <property type="entry name" value="CHEMOTAXIS_TRANSDUC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0807">Transducer</keyword>
    <feature type="domain" description="Methyl-accepting transducer" evidence="3">
        <location>
            <begin position="50"/>
            <end position="286"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="22"/>
            <end position="43"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ66430.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="589" mass="62855" checksum="B089331EC12EB42A" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWX1</accession>
    <name>A0A0M6ZWX1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">ABC transporter glutamine-binding protein GlnH</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">glnH_1</name>
        <name evidence="6" type="ORF">LAX5112_01290</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the bacterial solute-binding protein 3 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67249.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671120.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01290"/>
    <dbReference type="EnsemblBacteria" id="CTQ67249">
        <property type="protein sequence ID" value="CTQ67249"/>
        <property type="gene ID" value="LAX5112_01290"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018313">
        <property type="entry name" value="SBP_3_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00062">
        <property type="entry name" value="PBPb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01039">
        <property type="entry name" value="SBP_BACTERIAL_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809021" evidence="4">
        <location>
            <begin position="26"/>
            <end position="262"/>
        </location>
    </feature>
    <feature type="domain" description="PBPb" evidence="5">
        <location>
            <begin position="35"/>
            <end position="255"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010333"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU003744"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM00062"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ67249.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="262" mass="27624" checksum="AEF9D4B2E8FA06B6" modified="2015-12-09" version="1">MLKRFAGLAGAAMAAVMLLAAPASAELKDILAAGKIKIATPENFPPFGALGADGEYEGYDIDVAKMIAEDLGVELELVPVTSKQRIPFLETDRVDIVIATLGANPERAKSIWFSHAYAPFFSGAFAKPDVAVSSIADFAGKKIAVTGGTLEDLAITEDAPDGAEIIRFGDNAATIAAYVSGQADVIVTGNMVALGISNDNPDFNLEPKFIIANSPSFIGVKTGNMDLLQWVNVFVLHKKLNGKLNGLSVKWLKTPLPPLPAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZY22</accession>
    <name>A0A0M6ZY22_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">LexA repressor</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01261</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67197.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67197">
        <property type="protein sequence ID" value="CTQ67197"/>
        <property type="gene ID" value="LAX5112_01261"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd06529">
        <property type="entry name" value="S24_LexA-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039418">
        <property type="entry name" value="LexA-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036286">
        <property type="entry name" value="LexA/Signal_pep-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015927">
        <property type="entry name" value="Peptidase_S24_S26A/B/C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00717">
        <property type="entry name" value="Peptidase_S24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51306">
        <property type="entry name" value="SSF51306"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidase_S24" evidence="1">
        <location>
            <begin position="131"/>
            <end position="265"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00717"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67197.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="272" mass="30582" checksum="F3C2CCA20309B0B7" modified="2015-12-09" version="1">MRNLRTPNCQRGMRTYFSDKTFLMNAQSEKSLYDKLQDLKEKSGMSLRAIARGMGYSQASSIQRYFSQDYPHDSLPDNFVKKLLEVLPGKGNPAITREDVLALSDGVLMPTGTATEAKAPLPRPKPAGTVPILGEVAAGIWMEASLFENENQENSHIPFDPRFPVEAQFILRVRGESMNLVAPNGDYILCVDYFKAMITPKVDDLVLVERSKDGGMTIERTAKELVRKNGRVELMPKSSDPRFQEPISYQEGDPEATEVQIRAKIIMSYRPF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZY94</accession>
    <name>A0A0M6ZY94_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Long-chain-fatty-acid--CoA ligase</fullName>
            <ecNumber evidence="5">6.2.1.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">lcfB_2</name>
        <name evidence="5" type="ORF">LAX5112_01173</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="6.2.1.3" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67000.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671018.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01173"/>
    <dbReference type="EnsemblBacteria" id="CTQ67000">
        <property type="protein sequence ID" value="CTQ67000"/>
        <property type="gene ID" value="LAX5112_01173"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004467">
        <property type="term" value="F:long-chain fatty acid-CoA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12780">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025110">
        <property type="entry name" value="AMP-bd_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045851">
        <property type="entry name" value="AMP-bd_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020845">
        <property type="entry name" value="AMP-binding_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000873">
        <property type="entry name" value="AMP-dep_Synth/Lig"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042099">
        <property type="entry name" value="ANL_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00501">
        <property type="entry name" value="AMP-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13193">
        <property type="entry name" value="AMP-binding_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00455">
        <property type="entry name" value="AMP_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0007">Acetylation</keyword>
    <keyword evidence="5" id="KW-0436">Ligase</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="196"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="domain" description="AMP-binding" evidence="3">
        <location>
            <begin position="10"/>
            <end position="405"/>
        </location>
    </feature>
    <feature type="domain" description="AMP-binding_C" evidence="4">
        <location>
            <begin position="414"/>
            <end position="488"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022990"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF13193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ67000.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="506" mass="54657" checksum="FFB62855865433D1" modified="2015-12-09" version="1">MHNRIHDFLDDAAAKRGDTVAIHDYADRAFTWTDLKGAAGEAEDLLRSFGLKAGDRLVMVFENCVSVPAFFYAASRMDAIIVPINARLTDAELERIFAHSDPSVVMFSTDVSEAANAHADHFGAEQVTGSFGEAALMRRDGAEAEPVFADGREQVALMLYTSGTTGTPKAAMLTHDNLNSAALASVKLRGRRDDDVTYLALPLSHIYGFVALLSAAVAQTTLRLEPRFDVARLYEALQTDVSLLPGVPQMHAHLFHYARAHNKAKYDAGHLRFVSSGGAPLDPAWKREAEAFYGLPLQNGYGLTEGAAGVCATLNEIGDPDISVGRPMGECVLRLDLEATGAEPGKGIGEILLGGPQVMKGYFRDPERTVEVITADGFFRTGDLGRFDAEGRLHIAGRSKELIIRSGFNVYPVEVEGILTDHPEVIVAGVVGRPVEGNEEVLAFVKVAKGSPVTEDELKAFLHDRLAPYKRPSKIVIAHELPAAPTGKILKSKLIETFAEDLAEPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYL1</accession>
    <name>A0A0M6ZYL1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative glycosyl transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01315</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67296.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671137.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01315"/>
    <dbReference type="EnsemblBacteria" id="CTQ67296">
        <property type="protein sequence ID" value="CTQ67296"/>
        <property type="gene ID" value="LAX5112_01315"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016758">
        <property type="term" value="F:hexosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007235">
        <property type="entry name" value="Glyco_trans_28_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016683">
        <property type="entry name" value="Glyco_trans_28_RedA_prd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04101">
        <property type="entry name" value="Glyco_tran_28_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF017085">
        <property type="entry name" value="Glycosyltransf_RedA_prd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glyco_tran_28_C" evidence="1">
        <location>
            <begin position="276"/>
            <end position="321"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04101"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67296.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="405" mass="45021" checksum="B3B45EE4C4BFA3CF" modified="2015-12-09" version="1">MSSTTPKILIYSHDSFGLGHLRRCRAIAQSLVGDFSTLSVLILSGSPIIGSFEFRSRVDFVRIPGVIKLRNGEYTPLSLHINIDQTLAIRSSIIEHTAEVFDPDIFIVDKEPTGLRGEVLGTLEALKKTDTRLVLGLRDVMDDPETLTEEWDRKNVYPALEDLYDEIWVYGPEGICDPLDGIDVSPKITDKLRYTGYLRRSLPKSAEDQPAPAPFEEEPYILVTPGGGGDGVEMVDWVMRAYEARQRPLFPALIVLGPFMPAAAAADFTERAEHLRDVEVLRFTPQIEPYLANATAIVGMGGYNTFCEILSFDKPTLMVPRVVPRREQAIRAERAEQSKLLKVLPIERYPDVDLMAEALSELPRMAPPSTAGVDNLLGGLDVIGQRVGDIFAERQETLAPKLVNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYL6</accession>
    <name>A0A0M6ZYL6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 7">6,7-dimethyl-8-ribityllumazine synthase</fullName>
            <shortName evidence="7">DMRL synthase</shortName>
            <shortName evidence="7">LS</shortName>
            <shortName evidence="7">Lumazine synthase</shortName>
            <ecNumber evidence="4 7">2.5.1.78</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">ribH1</name>
        <name evidence="7" type="synonym">ribH</name>
        <name evidence="8" type="ORF">LAX5112_01035</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>(2S)-2-hydroxy-3-oxobutyl phosphate + 5-amino-6-(D-ribitylamino)uracil = 6,7-dimethyl-8-(1-D-ribityl)lumazine + H(+) + 2 H2O + phosphate</text>
            <dbReference type="Rhea" id="RHEA:26152"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15934"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58201"/>
            <dbReference type="ChEBI" id="CHEBI:58830"/>
            <dbReference type="EC" id="2.5.1.78"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 7">Cofactor biosynthesis; riboflavin biosynthesis; riboflavin from 2-hydroxy-3-oxobutyl phosphate and 5-amino-6-(D-ribitylamino)uracil: step 1/2.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 7">Belongs to the DMRL synthase family.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.78" evidence="4 7"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66624.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008197303.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01035"/>
    <dbReference type="EnsemblBacteria" id="CTQ66624">
        <property type="protein sequence ID" value="CTQ66624"/>
        <property type="gene ID" value="LAX5112_01035"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00275">
        <property type="reaction ID" value="UER00404"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009349">
        <property type="term" value="C:riboflavin synthase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000906">
        <property type="term" value="F:6,7-dimethyl-8-ribityllumazine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009231">
        <property type="term" value="P:riboflavin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd09209">
        <property type="entry name" value="Lumazine_synthase-I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.960">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00178">
        <property type="entry name" value="Lumazine_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034964">
        <property type="entry name" value="LS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002180">
        <property type="entry name" value="LS/RS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036467">
        <property type="entry name" value="LS/RS_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21058">
        <property type="entry name" value="PTHR21058"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00885">
        <property type="entry name" value="DMRL_synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52121">
        <property type="entry name" value="SSF52121"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00114">
        <property type="entry name" value="lumazine-synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 7" id="KW-0686">Riboflavin biosynthesis</keyword>
    <keyword evidence="6 7 8" id="KW-0808">Transferase</keyword>
    <feature type="region of interest" description="5-amino-6-(D-ribitylamino)uracil binding" evidence="7">
        <location>
            <begin position="45"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="region of interest" description="5-amino-6-(D-ribitylamino)uracil binding" evidence="7">
        <location>
            <begin position="74"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="region of interest" description="1-deoxy-L-glycero-tetrulose 4-phosphate binding" evidence="7">
        <location>
            <begin position="79"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="7">
        <location>
            <position position="82"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="14"/>
        </location>
        <ligand>
            <name>5-amino-6-(D-ribitylamino)uracil</name>
            <dbReference type="ChEBI" id="CHEBI:15934"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="107"/>
        </location>
        <ligand>
            <name>5-amino-6-(D-ribitylamino)uracil</name>
            <dbReference type="ChEBI" id="CHEBI:15934"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="121"/>
        </location>
        <ligand>
            <name>(2S)-2-hydroxy-3-oxobutyl phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58830"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001697"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007424"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022619"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00178"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ66624.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="149" mass="15638" checksum="F8AD64E3A4305531" modified="2015-12-09" version="1">MSAAPKLLIIEARFYDDLADSLAEGAIATLDAAGATYERVAVPGVLEIPAALSMAMTAMENEGALYDGFVLLGAVIRGETTHYDIVANESNRVIMDLIVDADLAVGNGILTVENNEQAWARAKVGDKNKGGAAAQAALDMIALRERFGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYS1</accession>
    <name>A0A0M6ZYS1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01257</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67190.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671092.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67190">
        <property type="protein sequence ID" value="CTQ67190"/>
        <property type="gene ID" value="LAX5112_01257"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023200">
        <property type="entry name" value="RMF_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="154"/>
            <end position="180"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67190.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="180" mass="19958" checksum="FA86FA5AA1F51E8A" modified="2015-12-09" version="1">MTNPAHNINKDQQYKAFQITRVATLQKEADSATAIYASALGKLESNGLDKWAVKEALKIKKKGQAEVTATIARFKKLFEYLKAINLPVEDDQLDMFPAVSHEEPLEDRAFRMGVLTGAMGEGMDQNPHSPETDAGQSWIKGFHEGAANFQQFKQEADEEEAEAAEVVKADDGQQDIEDDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZ50</accession>
    <name>A0A0M6ZZ50_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">SOUL heme-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01333</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67330.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67330">
        <property type="protein sequence ID" value="CTQ67330"/>
        <property type="gene ID" value="LAX5112_01333"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.80.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011256">
        <property type="entry name" value="Reg_factor_effector_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006917">
        <property type="entry name" value="SOUL_haem-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11220">
        <property type="entry name" value="PTHR11220"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04832">
        <property type="entry name" value="SOUL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55136">
        <property type="entry name" value="SSF55136"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="39"/>
            <end position="60"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67330.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="235" mass="25958" checksum="12145FDF9897741F" modified="2015-12-09" version="1">MVTSGLRMGPFLLVPSGLPDRHQSISGPFRRAARRRFMLKNFAITFGALLLLGGIGTLLWSNMSRFLEQPQFTLVASHGPIEIRQYKSAAAAEVTVMGDRDEAARDAFRILFRYISGNNGATDKISMTAPVIQSPTDAESWTVAFYLPSDFSPETAPQPEDTRVSIVPISDATVAAIRFSGRWSPQNLKEQQARLEAFLQEEGLTALGPPTFAFFNDPLTPPPFRRNEVQIRISG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZM1</accession>
    <name>A0A0M6ZZM1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Serine acetyltransferase</fullName>
            <ecNumber evidence="1">2.3.1.30</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">cysE_1</name>
        <name evidence="1" type="ORF">LAX5112_01456</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.3.1.30" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67622.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671278.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01456"/>
    <dbReference type="EnsemblBacteria" id="CTQ67622">
        <property type="protein sequence ID" value="CTQ67622"/>
        <property type="gene ID" value="LAX5112_01456"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009001">
        <property type="term" value="F:serine O-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001451">
        <property type="entry name" value="Hexapep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011004">
        <property type="entry name" value="Trimer_LpxA-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00132">
        <property type="entry name" value="Hexapep"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51161">
        <property type="entry name" value="SSF51161"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67622.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="175" mass="18426" checksum="760A407DBC577020" modified="2015-12-09" version="1">MPIYSLEGVRPQVPDAGLSWVAPTATLIGDVHLEDESSIWFDAVLRGDREPIRIGKRSNVQDGCVFHADPGYPLTVGANCTIGHKVILHGCTINDNSLIGMGATILNGAVIGSNCIIGANALISEGKVIPDNSLVVGVPGKVVRELPESAAADIRRSADGYVANWQRYAAGLVEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A054</accession>
    <name>A0A0M7A054_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ</fullName>
            <ecNumber evidence="5">2.1.1.200</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="5">tRNA Cm32/Um32 methyltransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5 7" type="primary">trmJ</name>
        <name evidence="7" type="ORF">LAX5112_01592</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>S-adenosyl-L-methionine + uridine(32) in tRNA = 2'-O-methyluridine(32) in tRNA + H(+) + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:42936"/>
            <dbReference type="Rhea" id="RHEA-COMP:10107"/>
            <dbReference type="Rhea" id="RHEA-COMP:10290"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:65315"/>
            <dbReference type="ChEBI" id="CHEBI:74478"/>
            <dbReference type="EC" id="2.1.1.200"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>cytidine(32) in tRNA + S-adenosyl-L-methionine = 2'-O-methylcytidine(32) in tRNA + H(+) + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:42932"/>
            <dbReference type="Rhea" id="RHEA-COMP:10288"/>
            <dbReference type="Rhea" id="RHEA-COMP:10289"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:74495"/>
            <dbReference type="ChEBI" id="CHEBI:82748"/>
            <dbReference type="EC" id="2.1.1.200"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="5">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.200" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67977.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01592"/>
    <dbReference type="EnsemblBacteria" id="CTQ67977">
        <property type="protein sequence ID" value="CTQ67977"/>
        <property type="gene ID" value="LAX5112_01592"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008173">
        <property type="term" value="F:RNA methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008033">
        <property type="term" value="P:tRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1280.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029028">
        <property type="entry name" value="Alpha/beta_knot_MTases"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004384">
        <property type="entry name" value="RNA_MeTrfase_TrmJ/LasT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001537">
        <property type="entry name" value="SpoU_MeTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029026">
        <property type="entry name" value="tRNA_m1G_MTases_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42786">
        <property type="entry name" value="PTHR42786"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00588">
        <property type="entry name" value="SpoU_methylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75217">
        <property type="entry name" value="SSF75217"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00050">
        <property type="entry name" value="rRNA_methyl_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2 5 7" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="3 7" id="KW-0808">Transferase</keyword>
    <keyword evidence="5" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="SpoU_methylase" evidence="6">
        <location>
            <begin position="67"/>
            <end position="217"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007228"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU362024"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00588"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ67977.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="317" mass="35507" checksum="8EAF0B28A63AC5D6" modified="2015-12-09" version="1">MAVSELIVWNLFSRNLKTTFVTDPVISGAGWECRGFKSFRRSAKSRCMSKNAKIRDEARAITARPPAVILCEPQLGENIGTAARAMANFGLVDLRIVNPRDGWPSEKARAAASRADHVIDKVQVFETTEAAIADLNFVYATTARSREVPKPVRGPDEAAVKAVDLGERKHGVGYLFGRERWGLNNEEVALADEIVTLPVDPDFASLNIAQAVLVCAYEWRKTASKGELPFLLSEEEHPPASKDDILRMFEHLESSLDEVSFFRPPERRPHMVRNLRNIFQKAELSQQEVRTLRGVIAALERRETRPRKTGDVDETEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0D2</accession>
    <name>A0A0M7A0D2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Protein HflK</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">hflK_1</name>
        <name evidence="8" type="ORF">LAX5112_01619</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">HflC and HflK could encode or regulate a protease.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">HflC and HflK may interact to form a multimeric complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the band 7/mec-2 family. HflK subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68057.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040450804.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01619"/>
    <dbReference type="EnsemblBacteria" id="CTQ68057">
        <property type="protein sequence ID" value="CTQ68057"/>
        <property type="gene ID" value="LAX5112_01619"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008233">
        <property type="term" value="F:peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd03404">
        <property type="entry name" value="SPFH_HflK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.479.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001107">
        <property type="entry name" value="Band_7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036013">
        <property type="entry name" value="Band_7/SPFH_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010201">
        <property type="entry name" value="HflK"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43327:SF2">
        <property type="entry name" value="PTHR43327:SF2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01145">
        <property type="entry name" value="Band_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00244">
        <property type="entry name" value="PHB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF117892">
        <property type="entry name" value="SSF117892"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01933">
        <property type="entry name" value="hflK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-0645">Protease</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="66"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="domain" description="PHB" evidence="7">
        <location>
            <begin position="93"/>
            <end position="279"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="53"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006971"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU364113"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="SMART" id="SM00244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ68057.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="399" mass="42724" checksum="8EA583A9AE22803A" modified="2015-12-09" version="1">MPWSNQSGGGGGPWGGGNNGGPWGGGGGNNNGPWGGGPNRGGGGGGGNPPDLEELLKRTQDRMKNVLPGGGGGLGILGVLIVIGLGVLGWLATGVYIVDEGRGEVGVELVLGKVTDQTGTGFHYNWPYPIGEVYKPQVEQQRETTVGVEELFTNTGAVRSRDVPEESLMLTGDENIVDVGFKVQWRIKNTRDGITNYLFNIQNPEGTVKAVAESAMREVVGESNIDAILTQNRVTIQNDVATLMQSTLDSYLAGIEITEVQMQKVDPPQQVIDSFRDVQAARADQERIQNEAQAYANRKIPEARGEAARVLEAANAYKEQTIAEATGQSQRFTKIYQEYKLAPDVTRERLYLETLEKVLGENNKIIIDSQSSGSGVLPFLPLNDLNGRGGGQSTRTGGN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A146</accession>
    <name>A0A0M7A146_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative peroxiredoxin bcp</fullName>
            <ecNumber evidence="2">1.11.1.15</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">bcp_1</name>
        <name evidence="2" type="ORF">LAX5112_01864</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.11.1.15" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68725.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671567.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01864"/>
    <dbReference type="EnsemblBacteria" id="CTQ68725">
        <property type="protein sequence ID" value="CTQ68725"/>
        <property type="gene ID" value="LAX5112_01864"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004601">
        <property type="term" value="F:peroxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013740">
        <property type="entry name" value="Redoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013766">
        <property type="entry name" value="Thioredoxin_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08534">
        <property type="entry name" value="Redoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51352">
        <property type="entry name" value="THIOREDOXIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-0575">Peroxidase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Thioredoxin" evidence="1">
        <location>
            <begin position="22"/>
            <end position="187"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68725.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="187" mass="20107" checksum="15898B854F48F973" modified="2015-12-09" version="1">MSLTDVDWSKLPAPEDDGTAARVAGMTLPQLELAATDGSKVHLADLAGTSVIYIYPKTGQPGVPLPDGWDTIPGARGCTPQSCAFRDHYNELSALGAGHIFGLSTQSTAYQAEAVERLHLPFPLLSDVDLTFTNALDLPSFEADGQTLLKRLTLIVRDGVVIKAFYPVFPPDRNAADVMVWLEENPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A197</accession>
    <name>A0A0M7A197_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01610</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68030.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671389.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01610"/>
    <dbReference type="EnsemblBacteria" id="CTQ68030">
        <property type="protein sequence ID" value="CTQ68030"/>
        <property type="gene ID" value="LAX5112_01610"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010296">
        <property type="entry name" value="DUF899_thioredox"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05988">
        <property type="entry name" value="DUF899"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ68030.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="232" mass="26633" checksum="A3BAB878A6555AFF" modified="2015-12-09" version="1">MEVNFVDRTTWLNARKVLLDQEKAFTKERDKLSEARRALPMVEVTEDYVFETADGKKTLSELFGPHPQLLVYHFMFGETWEEGCPSCSFWADNYERLDVHLAARDTALISTSNAPIDTLIEYQKRFGWSFTWASTAGNSFSRDFGVTFPGKEVSNGNGYNYKETTFAEELPGVSAFLKLNDGRIGHSYSTYGRGLDILNMAYNLLDLTPMGRHEDDLPYPMSWVRRRDQYGQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1B3</accession>
    <name>A0A0M7A1B3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 5">50S ribosomal protein L23</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 6" type="primary">rplW</name>
        <name evidence="6" type="ORF">LAX5112_01728</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Part of the 50S ribosomal subunit. Contacts protein L29, and trigger factor when it is bound to the ribosome.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the universal ribosomal protein uL23 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68407.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008196252.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01728"/>
    <dbReference type="EnsemblBacteria" id="CTQ68407">
        <property type="protein sequence ID" value="CTQ68407"/>
        <property type="gene ID" value="LAX5112_01728"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01369_B">
        <property type="entry name" value="Ribosomal_L23_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012678">
        <property type="entry name" value="Ribosomal_L23/L15e_core_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013025">
        <property type="entry name" value="Ribosomal_L25/23"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11620">
        <property type="entry name" value="PTHR11620"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00276">
        <property type="entry name" value="Ribosomal_L23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54189">
        <property type="entry name" value="SSF54189"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3 5 6" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="5" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="5" id="KW-0699">rRNA-binding</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006700"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00021203"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01369"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ68407.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="97" mass="10550" checksum="6C08A465FA664F64" modified="2015-12-09" version="1">MSNLPHYDKIVGPVITEKSTMASEENKVVFKVANDATKPEIKAAVEALFGVKVTAVNTLVRKGKVKRFRGRLGRQSDFKKAVVTLQEGHAIDVATGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1S9</accession>
    <name>A0A0M7A1S9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Bacteriophytochrome cph2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">cph2_5</name>
        <name evidence="4" type="ORF">LAX5112_01476</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
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            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67673.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671290.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01476"/>
    <dbReference type="EnsemblBacteria" id="CTQ67673">
        <property type="protein sequence ID" value="CTQ67673"/>
        <property type="gene ID" value="LAX5112_01476"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01948">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01949">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.450">
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="CHASE4"/>
    </dbReference>
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        <property type="entry name" value="EAL_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035919">
        <property type="entry name" value="EAL_sf"/>
    </dbReference>
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        <property type="entry name" value="GGDEF_dom"/>
    </dbReference>
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        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05228">
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    </dbReference>
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    </dbReference>
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        <property type="entry name" value="GGDEF"/>
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    </dbReference>
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        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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    </dbReference>
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        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
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    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="281"/>
            <end position="300"/>
        </location>
    </feature>
    <feature type="domain" description="GGDEF" evidence="3">
        <location>
            <begin position="348"/>
            <end position="481"/>
        </location>
    </feature>
    <feature type="domain" description="EAL" evidence="2">
        <location>
            <begin position="490"/>
            <end position="739"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ67673.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="759" mass="84528" checksum="B5EF44C4A58249CD" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1T9</accession>
    <name>A0A0M7A1T9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Methyl-accepting chemotaxis protein 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">mcp2_1</name>
        <name evidence="5" type="ORF">LAX5112_01891</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the methyl-accepting chemotaxis (MCP) protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68799.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671587.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01891"/>
    <dbReference type="EnsemblBacteria" id="CTQ68799">
        <property type="protein sequence ID" value="CTQ68799"/>
        <property type="gene ID" value="LAX5112_01891"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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    </dbReference>
    <dbReference type="InterPro" id="IPR004089">
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    </dbReference>
    <dbReference type="Pfam" id="PF00672">
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00015">
        <property type="entry name" value="MCPsignal"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50111">
        <property type="entry name" value="CHEMOTAXIS_TRANSDUC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
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        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0807">Transducer</keyword>
    <feature type="domain" description="HAMP" evidence="4">
        <location>
            <begin position="10"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="domain" description="Methyl-accepting transducer" evidence="3">
        <location>
            <begin position="126"/>
            <end position="348"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00029447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ68799.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="386" mass="40379" checksum="0F60007CCAB50306" modified="2015-12-09" version="1">MIGGLSKTSLRKATKVCKAVAAGDFEARITGISETGEAAELMHAINLLIDRTDAYLRESKACLDYVGRNQHFRMISETGMVGGFASAANSINKATVAIKEKHDAFCDLAEQFETRLKDVVETVTHSVQELNTVSTGVAAASATVNEQSTVVASAAEQTSANMQSVSSATEELASSVREINRQVYSASETAEGAVSKSETMNREIGSLAKMSSDIGEVVQLITDIAAQTNLLALNATIEAARAGEHGRGFAIVAQEVKALAGQTAEATQTINGQISGLQGATKNAVAASEEISLAIDQVNKVSTAIASSVEEQAAATGEIAQNIDEVASGVAEVSSSIANVRAATAESKQISDRVLVEAETLNAQEVQLRSLREDMRHFLATATKVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2B0</accession>
    <name>A0A0M7A2B0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Carboxylate/amino acid/amine transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01957</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68979.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671639.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01957"/>
    <dbReference type="EnsemblBacteria" id="CTQ68979">
        <property type="protein sequence ID" value="CTQ68979"/>
        <property type="gene ID" value="LAX5112_01957"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000620">
        <property type="entry name" value="EamA_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00892">
        <property type="entry name" value="EamA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="9"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="39"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="95"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="123"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="146"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="175"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="209"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="235"/>
            <end position="257"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="263"/>
            <end position="281"/>
        </location>
    </feature>
    <feature type="domain" description="EamA" evidence="2">
        <location>
            <begin position="9"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="domain" description="EamA" evidence="2">
        <location>
            <begin position="152"/>
            <end position="275"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ68979.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="292" mass="30606" checksum="8FD9BAC8F668AD4D" modified="2015-12-09" version="1">MDHPGNSRAIAAMLIAMAGFILNDTLVKMASDAVPLGQIILVRGLICIAALGVAGAVTGLFHNARVLAHPAVLVRALAETAATMLYLTALFQLPIANATAILQVLPLVVTAAAAVFLKDAVGWRRWSAILVGLIGVLLIIRPGLDGFNAFSLLALAGVGCMALRDLATRQLPKDVPTLGVALVSFVAVTLLGTLLTVQSGWTDLSLVEYGYLGGAAVFVLVGYVFIILAMRLGDIAVVAPFRYTIVVWAILLGYLVWGDIPDGITLVGIAIVIASGTYSFFRERKAGAAETR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2M1</accession>
    <name>A0A0M7A2M1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">EamA-like transporter family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01899</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68821.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671593.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01899"/>
    <dbReference type="EnsemblBacteria" id="CTQ68821">
        <property type="protein sequence ID" value="CTQ68821"/>
        <property type="gene ID" value="LAX5112_01899"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000620">
        <property type="entry name" value="EamA_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00892">
        <property type="entry name" value="EamA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="31"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="56"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="98"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="126"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="153"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="182"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="212"/>
            <end position="233"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="245"/>
            <end position="263"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="275"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="301"/>
            <end position="319"/>
        </location>
    </feature>
    <feature type="domain" description="EamA" evidence="2">
        <location>
            <begin position="185"/>
            <end position="318"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ68821.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="324" mass="33743" checksum="3475BA3F02BC0E7F" modified="2015-12-09" version="1">MSDTFKTLPSQAGEVPRQQPSLLTRFYDNPLILLLIVGSFLAVSVVFAKAGPMVGWHPLGLLQWAIIGGAALLWSGAQFAGVESGARYRTTRAAKLGLLKYLFITGILFIAPNMIAVVAAPEVGASFVSLSYAFPLVLTYAFAVLIGLERFQFLRSIGVLAGLAGGILLAGGGAGVSPEGSFWAIVTLAIPVFLAVGNIYRSLKWPDGATPIELALGMMVVAFIALAIFNAVMGIPVGPAEWTSAALGLLLAQILAFSVQYGLYFRLQQVAGPVYLSQIGSVAAIAGLGLGYLVFSEVPNLAKLGAIAAVALGIVFVTLGKGRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2R2</accession>
    <name>A0A0M7A2R2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Cyd operon protein YbgT</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01913</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68861.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01913"/>
    <dbReference type="EnsemblBacteria" id="CTQ68861">
        <property type="protein sequence ID" value="CTQ68861"/>
        <property type="gene ID" value="LAX5112_01913"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011724">
        <property type="entry name" value="Cyd_oper_YbgT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012994">
        <property type="entry name" value="YbgT_YccB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08173">
        <property type="entry name" value="YbgT_YccB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02106">
        <property type="entry name" value="cyd_oper_ybgT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="24"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68861.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="39" mass="4656" checksum="F9B39F0445603F99" modified="2015-12-09" version="1">MWYFAWILGMPLACCLAILNAMWLELRSEDERRRGLNPD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="31" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2Z5</accession>
    <name>A0A0M7A2Z5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Sulfopropanediol 3-dehydrogenase</fullName>
            <ecNumber evidence="4">1.1.1.308</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">2,3-dihydroxypropane-1-sulfonate 3-dehydrogenase (sulfolactate forming)</fullName>
            <shortName evidence="4">DHPS 3-dehydrogenase (sulfolactate forming)</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="4 10" type="primary">hpsN</name>
        <name evidence="10" type="ORF">LAX5112_02113</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Catalyzes the NAD-dependent oxidation of (R)-2,3-dihydroxypropane-1-sulfonate to (R)-3-sulfolactate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>(2R)-3-sulfopropanediol + H2O + 2 NAD(+) = (2R)-3-sulfolactate + 3 H(+) + 2 NADH</text>
            <dbReference type="Rhea" id="RHEA:28074"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:58738"/>
            <dbReference type="ChEBI" id="CHEBI:60997"/>
            <dbReference type="EC" id="1.1.1.308"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="4 9">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="4 9">Binds 1 zinc ion per subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the histidinol dehydrogenase family. HpsN subfamily.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.308" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69435.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671775.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02113"/>
    <dbReference type="EnsemblBacteria" id="CTQ69435">
        <property type="protein sequence ID" value="CTQ69435"/>
        <property type="gene ID" value="LAX5112_02113"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004399">
        <property type="term" value="F:histidinol dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000105">
        <property type="term" value="P:histidine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06572">
        <property type="entry name" value="Histidinol_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02228">
        <property type="entry name" value="Sulfopropanediol_dehydrog"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016161">
        <property type="entry name" value="Ald_DH/histidinol_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001692">
        <property type="entry name" value="Histidinol_DH_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022695">
        <property type="entry name" value="Histidinol_DH_monofunct"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012131">
        <property type="entry name" value="Hstdl_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043678">
        <property type="entry name" value="Sulfopropanediol_dehydrog_HpsN"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21256">
        <property type="entry name" value="PTHR21256"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00815">
        <property type="entry name" value="Histidinol_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000099">
        <property type="entry name" value="Histidinol_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00083">
        <property type="entry name" value="HOLDHDRGNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53720">
        <property type="entry name" value="SSF53720"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00069">
        <property type="entry name" value="hisD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00611">
        <property type="entry name" value="HISOL_DEHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 4 9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4 7" id="KW-0520">NAD</keyword>
    <keyword evidence="3 4 5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4 9" id="KW-0862">Zinc</keyword>
    <feature type="active site" description="Proton acceptor" evidence="4 6">
        <location>
            <position position="319"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="4 6">
        <location>
            <position position="320"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4 7">
        <location>
            <position position="119"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4 7">
        <location>
            <position position="181"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4 7">
        <location>
            <position position="204"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="227"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4 8 9">
        <location>
            <position position="249"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4 8 9">
        <location>
            <position position="252"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="320"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4 8 9">
        <location>
            <position position="353"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="407"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4 8 9">
        <location>
            <position position="412"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02228"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRNR" id="PIRNR000099"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR000099-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR000099-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR000099-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR000099-4"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ69435.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="437" mass="46796" checksum="0B82A57BF249A4E7" modified="2015-12-09" version="1">MTVEYLKKADLTSKTDASETTKVVQEILDTIEAGGDAAAMEYAAKFDKYDGEIILNDAEIEAASAKVPEKLKRDIEFAHANVKRFAEAQRETCQNIEVEVVPGLIAGQKSIPVNTAGCYIPGGRYSHIASAIMTVTTAKVAGCENIVACSPPRPGIGINPAIIYAAHVCGADKIVAMGGVQGVAAMTFGLFDLPKANILVGPGNQFVAEAKRILFGRVGIDMFAGPTDSLILADRIADPEVVAADLVGQAEHGYNSPVWLVTDTRSLAKEVMALVPKLIDDLPEVNSQNAAAAWRDYAEVILCDTREEMAATSDAYAPEHLTVQAEDLDWWLNRLSCYGSLFLGEETTVAFGDKASGTNHVLPTSGAASYTGGLSVHKFMKIVTWQRATRDGAKPVAEATARISRLEGMEGHARTADIRLRKYFPGENFDLSAEAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3D0</accession>
    <name>A0A0M7A3D0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 5 6">50S ribosomal protein L20</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 7" type="primary">rplT</name>
        <name evidence="7" type="ORF">LAX5112_02096</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5 6">Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 5 6">Belongs to the bacterial ribosomal protein bL20 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69389.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008190886.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02096"/>
    <dbReference type="EnsemblBacteria" id="CTQ69389">
        <property type="protein sequence ID" value="CTQ69389"/>
        <property type="gene ID" value="LAX5112_02096"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000027">
        <property type="term" value="P:ribosomal large subunit assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07026">
        <property type="entry name" value="Ribosomal_L20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1900.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00382">
        <property type="entry name" value="Ribosomal_L20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005813">
        <property type="entry name" value="Ribosomal_L20"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035566">
        <property type="entry name" value="Ribosomal_protein_L20_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10986">
        <property type="entry name" value="PTHR10986"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00453">
        <property type="entry name" value="Ribosomal_L20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00062">
        <property type="entry name" value="RIBOSOMALL20"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF74731">
        <property type="entry name" value="SSF74731"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01032">
        <property type="entry name" value="rplT_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00937">
        <property type="entry name" value="RIBOSOMAL_L20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5 6" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3 5 6" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="5 6" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="5 6" id="KW-0699">rRNA-binding</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007698"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00021194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU000560"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ69389.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="119" mass="13340" checksum="1B53BB9E3CC3C414" modified="2015-12-09" version="1">MSRVKRGVTAHARHKKVLKAAKGYYGRRKNTIRVAKQAVEKAGQYAYRDRKAKKRNFRSLWIQRINAATRQHGMTYGTFINGLNKAGIEVDRKVLSDLAISQPDAFKALVDQAQGALAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3T6</accession>
    <name>A0A0M7A3T6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">3-keto-5-aminohexanoate cleavage enzyme</fullName>
            <ecNumber evidence="1">2.-.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">kce_2</name>
        <name evidence="1" type="ORF">LAX5112_02151</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.-.-.-" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69539.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671804.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02151"/>
    <dbReference type="EnsemblBacteria" id="CTQ69539">
        <property type="protein sequence ID" value="CTQ69539"/>
        <property type="gene ID" value="LAX5112_02151"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019475">
        <property type="term" value="P:L-lysine catabolic process to acetate"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008567">
        <property type="entry name" value="KCE_family"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37418">
        <property type="entry name" value="PTHR37418"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05853">
        <property type="entry name" value="BKACE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ69539.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="277" mass="29949" checksum="C381AD31085727B8" modified="2015-12-09" version="1">MSKPCIICVAITGSLPRKEHNPAVPVTVSEQIESTQEAFEAGATICHAHVRNDDQTPSSDPEKFARLKEGLEKHCPGMIIQFSTGGRSGAGKTRGGMLPLKPDMASLSVGSNNFPTRVYENPPDLVDWLAGEMRTYGVKPEIEAFDLSHIVQAAAMNRDGRIPGNIYIQFVMGVKNAMPADKDVFDFYVKTVKRLMPEAEWCAAGIGASQLTLNEWSIAAGGHARTGLEDNIRLDKDCLAPSNAALVKRTAEICAAHHRPVATPVQARDILGLPQHA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3V5</accession>
    <name>A0A0M7A3V5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">L-glyceraldehyde 3-phosphate reductase</fullName>
            <ecNumber evidence="2">1.1.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">gpr_2</name>
        <name evidence="2" type="ORF">LAX5112_02230</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.1.1.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69738.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671861.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02230"/>
    <dbReference type="EnsemblBacteria" id="CTQ69738">
        <property type="protein sequence ID" value="CTQ69738"/>
        <property type="gene ID" value="LAX5112_02230"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023210">
        <property type="entry name" value="NADP_OxRdtase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036812">
        <property type="entry name" value="NADP_OxRdtase_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00248">
        <property type="entry name" value="Aldo_ket_red"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51430">
        <property type="entry name" value="SSF51430"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aldo_ket_red" evidence="1">
        <location>
            <begin position="16"/>
            <end position="341"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00248"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69738.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="350" mass="39069" checksum="7B8B2D54F399B85F" modified="2015-12-09" version="1">MELRTLGRTDIKVSALCLGTMTYGEQNTEAEGHAQMDYALEKGVNFFDTAELYAIPPKKETQGRTERIIGTWFQKTGNRDKVVLATKVVGRTGMDWFREHGNGASLTRAEIEFAVDRSLKNLQTDYIDLYQIHWPDRNMSNFGANPTRWSPPELHEDENSIESTLEVMADLVKSGKVRHIGISNESSWGTMRYVAASEHLGLPRVASIQNTYNLVNRTFETGLAEIAQRENVGLLGYSALAQGYLSGKYRNGALPAGSRKVLFDRLQRYEHPRSIEAYDAYFSLADEAGLDPAQMAIAFAKSRDFMTSVILGATRMDQLENDIAAADVTLSNDVLEKIDTIHQEFGNTAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4W5</accession>
    <name>A0A0M7A4W5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02200</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69657.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02200"/>
    <dbReference type="EnsemblBacteria" id="CTQ69657">
        <property type="protein sequence ID" value="CTQ69657"/>
        <property type="gene ID" value="LAX5112_02200"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ69657.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="146" mass="16772" checksum="5A43C1F1CD52DA60" modified="2015-12-09" version="1">MEDEILDQQNELDKYGMSELLGRSREIAMRVALIIALSEESASVRRKHLVWAKEYVFHYHLEMIEALKENLGKTADEQIADAVFSLIKKSGKRGATLREIVHKCRPFRTLNSKAREEVINRLKTDFGVKIAEMRSTGRKRVAFVAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4Z2</accession>
    <name>A0A0M7A4Z2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Multidrug transporter MdtA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">mdtA_2</name>
        <name evidence="3" type="ORF">LAX5112_02301</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ69959.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672117.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02301"/>
    <dbReference type="EnsemblBacteria" id="CTQ69959">
        <property type="protein sequence ID" value="CTQ69959"/>
        <property type="gene ID" value="LAX5112_02301"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032317">
        <property type="entry name" value="HlyD_D23"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006143">
        <property type="entry name" value="RND_pump_MFP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16576">
        <property type="entry name" value="HlyD_D23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01730">
        <property type="entry name" value="RND_mfp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HlyD_D23" evidence="2">
        <location>
            <begin position="65"/>
            <end position="243"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF16576"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ69959.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="338" mass="36757" checksum="EA6F0851E9BDC156" modified="2015-12-09" version="1">MRYFRYLLILAALGAAFSAWSWWSARPPKVTVTEAFVGSAADVVYATAVVEPVNWAKVTSILRERIVSLCGCEGMVVQKGDQLAELDSGDARAALAELEARQSLAKSESERALQLLERRVISQHLYDRAQSELIQVNAVIAAQTERLRDYRIVAPMDGVVLRQDGSVGEVAEPGDILFWIGQPKPLQLVAEVNEEDIPKVAARQTALVRADAFPGQDLTATVARITPKGDPVLKNYRVYLDLPKDTPLHIGMTTEINIVALEKPETVLVPVAALDGQRLQTVSGSKTVKTITVETGITGTRHVEILDGLADGDTVLLPFRDDLSDGQKVEPVAEGTPE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5F0</accession>
    <name>A0A0M7A5F0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02479</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70355.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672141.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02479"/>
    <dbReference type="EnsemblBacteria" id="CTQ70355">
        <property type="protein sequence ID" value="CTQ70355"/>
        <property type="gene ID" value="LAX5112_02479"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013217">
        <property type="entry name" value="Methyltransf_12"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_repeat"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08242">
        <property type="entry name" value="Methyltransf_12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50005">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0802">TPR repeat</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="3" id="KW-0830">Ubiquinone</keyword>
    <feature type="repeat" description="TPR" evidence="1">
        <location>
            <begin position="11"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="domain" description="Methyltransf_12" evidence="2">
        <location>
            <begin position="112"/>
            <end position="208"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00339"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF08242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ70355.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="277" mass="30090" checksum="9726C01102E5F073" modified="2015-12-09" version="1">MPAATVENDALAEAYNRGLKLEKAGDLVAAAEAYREALALGPSDPGGVSIRLAAMGVAETPGKMPDAYVATLFDQHADVFDEILVDDLGYCVPLLLQDLVGRLELGPFDRFLDLGCGTGLTGLAFSETAQHLTGVDLSERIVELAYDREVYGDLYVGEAVEFLEDFEDEDGSRPSWDFIAATDVFPYLGAIEPFLKGAAARLVAGGYFAFSTETLPDTVLEGRDYMVGPKSRFAQSEAYVRRALEEFGFDILAMDPITVRMEEGEPVPGHLVMTRKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5F3</accession>
    <name>A0A0M7A5F3_9HYPH</name>
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        <submittedName>
            <fullName evidence="14">Cytochrome d ubiquinol oxidase subunit 1</fullName>
            <ecNumber evidence="14">1.10.3.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="14" type="primary">cydA</name>
        <name evidence="14" type="ORF">LAX5112_01911</name>
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        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
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            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
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    <reference evidence="15" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="12">Cell inner membrane</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 12">Belongs to the cytochrome ubiquinol oxidase subunit 1 family.</text>
    </comment>
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        <property type="protein sequence ID" value="CTQ68854.1"/>
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    </dbReference>
    <dbReference type="RefSeq" id="WP_055671604.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01911"/>
    <dbReference type="EnsemblBacteria" id="CTQ68854">
        <property type="protein sequence ID" value="CTQ68854"/>
        <property type="gene ID" value="LAX5112_01911"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070069">
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
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        <property type="term" value="C:integral component of membrane"/>
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        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019646">
        <property type="term" value="P:aerobic electron transport chain"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002585">
        <property type="entry name" value="Cyt-d_ubiquinol_oxidase_su_1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30365">
        <property type="entry name" value="PTHR30365"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01654">
        <property type="entry name" value="Cyt_bd_oxida_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006446">
        <property type="entry name" value="Cyt_quinol_oxidase_1"/>
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    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 12" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8 12" id="KW-0249">Electron transport</keyword>
    <keyword evidence="5 12" id="KW-0349">Heme</keyword>
    <keyword evidence="10 12" id="KW-0408">Iron</keyword>
    <keyword evidence="11 12" id="KW-0472">Membrane</keyword>
    <keyword evidence="7 12" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="14" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 12" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3 12" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="20"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="55"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="93"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="129"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="185"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="221"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="391"/>
            <end position="416"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="428"/>
            <end position="451"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="471"/>
            <end position="495"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="13">
        <location>
            <begin position="514"/>
            <end position="534"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009819"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRNR" id="PIRNR006446"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="CTQ68854.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="534" mass="59684" checksum="043949B98313595B" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="35" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6Q0</accession>
    <name>A0A0M7A6Q0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="11">K(+)/H(+) antiporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">kefC_2</name>
        <name evidence="11" type="ORF">LAX5112_02355</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.</text>
    </comment>
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        <property type="protein sequence ID" value="CTQ70096.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70096">
        <property type="protein sequence ID" value="CTQ70096"/>
        <property type="gene ID" value="LAX5112_02355"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015079">
        <property type="term" value="F:potassium ion transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015299">
        <property type="term" value="F:solute:proton antiporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1530.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006153">
        <property type="entry name" value="Cation/H_exchanger"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004771">
        <property type="entry name" value="K/H_exchanger"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006036">
        <property type="entry name" value="K_uptake_TrkA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038770">
        <property type="entry name" value="Na+/solute_symporter_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003148">
        <property type="entry name" value="RCK_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00999">
        <property type="entry name" value="Na_H_Exchanger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02254">
        <property type="entry name" value="TrkA_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00335">
        <property type="entry name" value="KUPTAKETRKA"/>
    </dbReference>
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        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="2a37"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51201">
        <property type="entry name" value="RCK_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0406">Ion transport</keyword>
    <keyword evidence="7 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-0630">Potassium</keyword>
    <keyword evidence="2" id="KW-0633">Potassium transport</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="6"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="34"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="59"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="90"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="118"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="150"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="185"/>
            <end position="207"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="219"/>
            <end position="237"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
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            <end position="291"/>
        </location>
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    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
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            <end position="318"/>
        </location>
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    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
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            <end position="356"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
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            <end position="382"/>
        </location>
    </feature>
    <feature type="domain" description="RCK N-terminal" evidence="10">
        <location>
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            <end position="529"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="573"/>
            <end position="596"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005551"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022538"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022958"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51201"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ70096.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="596" mass="63198" checksum="59F1266ABD1BFD97" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A747</accession>
    <name>A0A0M7A747_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Enamine/imine deaminase</fullName>
            <ecNumber evidence="1">3.5.4.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yabJ_2</name>
        <name evidence="1" type="ORF">LAX5112_02120</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.5.4.-" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69454.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671779.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ69454">
        <property type="protein sequence ID" value="CTQ69454"/>
        <property type="gene ID" value="LAX5112_02120"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06150">
        <property type="entry name" value="YjgF_YER057c_UK114_like_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035959">
        <property type="entry name" value="RutC-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006175">
        <property type="entry name" value="YjgF/YER057c/UK114"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035709">
        <property type="entry name" value="YoaB-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47328">
        <property type="entry name" value="PTHR47328"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01042">
        <property type="entry name" value="Ribonuc_L-PSP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55298">
        <property type="entry name" value="SSF55298"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ69454.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="117" mass="12546" checksum="C38A009A14ADFA6B" modified="2015-12-09" version="1">MSDIKRLNVGPRISQAVVHGGLVWLAGQVGDPGESVADQTTVILQKIEKLLADAGSDKSRLLQATIWLASMDDFAEMNEVWDAWVDPANPPARACGESKLATPEYTVEIIVVAATSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A786</accession>
    <name>A0A0M7A786_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Putative prophage CPS-53 integrase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">intS_1</name>
        <name evidence="4" type="ORF">LAX5112_02134</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69494.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02134"/>
    <dbReference type="EnsemblBacteria" id="CTQ69494">
        <property type="protein sequence ID" value="CTQ69494"/>
        <property type="gene ID" value="LAX5112_02134"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.130">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.443.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.390">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011010">
        <property type="entry name" value="DNA_brk_join_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013762">
        <property type="entry name" value="Integrase-like_cat_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002104">
        <property type="entry name" value="Integrase_catalytic"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038488">
        <property type="entry name" value="Integrase_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025166">
        <property type="entry name" value="Integrase_DNA_bind_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010998">
        <property type="entry name" value="Integrase_recombinase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004107">
        <property type="entry name" value="Integrase_SAM-like_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13356">
        <property type="entry name" value="Arm-DNA-bind_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14659">
        <property type="entry name" value="Phage_int_SAM_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00589">
        <property type="entry name" value="Phage_integrase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56349">
        <property type="entry name" value="SSF56349"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51898">
        <property type="entry name" value="TYR_RECOMBINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tyr recombinase" evidence="3">
        <location>
            <begin position="198"/>
            <end position="404"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ69494.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="441" mass="50016" checksum="0F34F11D4E29E62E" modified="2015-12-09" version="1">MPKLSKRRIDAAKPGGKKYFLWDGELKGFGVVILPSGKKNFIVQFRTLEGRSRRLTLGLYGALTPDEARKLAIKALSETKHGQDPMADRHKLRRAPTVNDMMNRYITEYVELHNRPTTLKHVKWMFEKVIGPKLGSLKVASIKRKDILQIHTGLAKTPTKANHMLGYLSKAFNLAEMWEWRAEQTNPVRGVKKFKENARDRYLTNEELTRLGVVLDEAETEGLPWIVKATGRNARHVAKSPELKRAPVNEMAVKALRLLLMTGARLNEIISLEWRHVDFHIGTIALPSRKGDGRRPHPVSSAVMDILADLSKNRRSHFVLPRDTDPDEHVSREVMESSWRRIRHFAEIPDVRIHDLRHTVGTYAAQAGGNAFLISHLLRHSNIQVTDRYVSQDFNPIRLLSEAIGQRILEGMGKYQATDADTVNAPAQLPAPAYEDNGNQD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7E1</accession>
    <name>A0A0M7A7E1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">2-dehydro-3-deoxy-phosphogluconate aldolase</fullName>
            <ecNumber evidence="3">4.1.2.14</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">eda</name>
        <name evidence="5" type="ORF">LAX5112_02685</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>2-dehydro-3-deoxy-6-phospho-D-gluconate = D-glyceraldehyde 3-phosphate + pyruvate</text>
            <dbReference type="Rhea" id="RHEA:17089"/>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
            <dbReference type="ChEBI" id="CHEBI:57569"/>
            <dbReference type="ChEBI" id="CHEBI:59776"/>
            <dbReference type="EC" id="4.1.2.14"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the KHG/KDPG aldolase family.</text>
    </comment>
    <dbReference type="EC" id="4.1.2.14" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71008.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672245.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02685"/>
    <dbReference type="EnsemblBacteria" id="CTQ71008">
        <property type="protein sequence ID" value="CTQ71008"/>
        <property type="gene ID" value="LAX5112_02685"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008675">
        <property type="term" value="F:2-dehydro-3-deoxy-phosphogluconate aldolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd00452">
        <property type="entry name" value="KDPG_aldolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000887">
        <property type="entry name" value="Aldlse_KDPG_KHG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031337">
        <property type="entry name" value="KDPG/KHG_AS_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031338">
        <property type="entry name" value="KDPG/KHG_AS_2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30246">
        <property type="entry name" value="PTHR30246"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01081">
        <property type="entry name" value="Aldolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01182">
        <property type="entry name" value="eda"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00159">
        <property type="entry name" value="ALDOLASE_KDPG_KHG_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00160">
        <property type="entry name" value="ALDOLASE_KDPG_KHG_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0456">Lyase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000654"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006906"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00013063"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ71008.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="212" mass="21947" checksum="4A326B8320A80788" modified="2015-12-09" version="1">MGQDISKIEAVMTAAPVIPVLVVEDPKKAVPMAEALVRGGLPAIEITLRTPHALEAIKAVSKHVEGAIVGAGTVLTPQQYDAVVSAGARFVVSPGATDTLLDTADEHSIPLLPGAATASEVMKLLERGYERLKFFPAEQAGGAPYLKSLSSPLAAAKFCPTGGVSLDKAPVYLKLPNVLCVGGSWIADAKAIASEDWAGIEERARAASQLGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7H5</accession>
    <name>A0A0M7A7H5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Periplasmic copper-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02210</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69683.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671922.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02210"/>
    <dbReference type="EnsemblBacteria" id="CTQ69683">
        <property type="protein sequence ID" value="CTQ69683"/>
        <property type="gene ID" value="LAX5112_02210"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.320">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021647">
        <property type="entry name" value="CusF_Ec"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042230">
        <property type="entry name" value="CusF_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11604">
        <property type="entry name" value="CusF_Ec"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809272" evidence="1">
        <location>
            <begin position="24"/>
            <end position="121"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69683.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="121" mass="12707" checksum="F090D6EC6B1B8FD5" modified="2015-12-09" version="1">MKLIKTLIIAAFLAAGTAPMTFADSKHGSDHSGMDHSNMDMNAEQMEGAVHTQAVVNSIGDGTANVTHEPIPEIGWPAMTMDLPLMESAQMMGDVDAGDSVTLMLVKGDDGLYAIGAMMPN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7L0</accession>
    <name>A0A0M7A7L0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Transcriptional activator NphR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">nphR_2</name>
        <name evidence="5" type="ORF">LAX5112_02733</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71145.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672309.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ71145">
        <property type="protein sequence ID" value="CTQ71145"/>
        <property type="gene ID" value="LAX5112_02733"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003313">
        <property type="entry name" value="AraC-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018062">
        <property type="entry name" value="HTH_AraC-typ_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020449">
        <property type="entry name" value="Tscrpt_reg_HTH_AraC-type"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02311">
        <property type="entry name" value="AraC_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00032">
        <property type="entry name" value="HTHARAC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00041">
        <property type="entry name" value="HTH_ARAC_FAMILY_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="4">
        <location>
            <begin position="178"/>
            <end position="259"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ71145.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="262" mass="29197" checksum="59CE5CF0AAA7E9B8" modified="2015-12-09" version="1">MSIHPELSEFPDHEVRAKIIGYANSQSAGRGHNGWHSHDSAQLFHVVKGSIAIDTEVGTFFAPPERAVWLPPRIAHETRYLTDTEIRFVYVNYDHAQDLPKTAQVIQVTTLLRALILEFMSYPRAETIDGPAGRIADVILDQLKMLPAAPLQLPMPQDSRLRDLCDGLVRCPAHVPALSDAAARSAMSIRSFERRIKAETGMNYRTWCRQVKLFRALELLAAGRSVSDVSHKLGYEGPSAFVATFRKAFGVTPGRYFGSPED</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9A6</accession>
    <name>A0A0M7A9A6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7 19">UDP-N-acetylenolpyruvoylglucosamine reductase</fullName>
            <ecNumber evidence="6 19">1.3.1.98</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="18 19">UDP-N-acetylmuramate dehydrogenase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="19 21" type="primary">murB</name>
        <name evidence="21" type="ORF">LAX5112_02617</name>
    </gene>
    <organism evidence="21 22">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="22" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="22">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3 19">Cell wall formation.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 19">
            <text>NADP(+) + UDP-N-acetyl-alpha-D-muramate = H(+) + NADPH + UDP-N-acetyl-3-O-(1-carboxyvinyl)-alpha-D-glucosamine</text>
            <dbReference type="Rhea" id="RHEA:12248"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="ChEBI" id="CHEBI:68483"/>
            <dbReference type="ChEBI" id="CHEBI:70757"/>
            <dbReference type="EC" id="1.3.1.98"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 19">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="5 19">Cell wall biogenesis; peptidoglycan biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4 19">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="19">Belongs to the MurB family.</text>
    </comment>
    <dbReference type="EC" id="1.3.1.98" evidence="6 19"/>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70810.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672198.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02617"/>
    <dbReference type="EnsemblBacteria" id="CTQ70810">
        <property type="protein sequence ID" value="CTQ70810"/>
        <property type="gene ID" value="LAX5112_02617"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00219"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071949">
        <property type="term" value="F:FAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008762">
        <property type="term" value="F:UDP-N-acetylmuramate dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007049">
        <property type="term" value="P:cell cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008360">
        <property type="term" value="P:regulation of cell shape"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.43.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.465.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.78.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00037">
        <property type="entry name" value="MurB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016166">
        <property type="entry name" value="FAD-bd_PCMH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036318">
        <property type="entry name" value="FAD-bd_PCMH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016167">
        <property type="entry name" value="FAD-bd_PCMH_sub1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016169">
        <property type="entry name" value="FAD-bd_PCMH_sub2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003170">
        <property type="entry name" value="MurB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011601">
        <property type="entry name" value="MurB_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036635">
        <property type="entry name" value="MurB_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006094">
        <property type="entry name" value="Oxid_FAD_bind_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21071">
        <property type="entry name" value="PTHR21071"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01565">
        <property type="entry name" value="FAD_binding_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02873">
        <property type="entry name" value="MurB_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56176">
        <property type="entry name" value="SSF56176"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56194">
        <property type="entry name" value="SSF56194"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00179">
        <property type="entry name" value="murB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51387">
        <property type="entry name" value="FAD_PCMH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="16 19" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="9 19" id="KW-0132">Cell division</keyword>
    <keyword evidence="13 19" id="KW-0133">Cell shape</keyword>
    <keyword evidence="17 19" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="8 19" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="11 19" id="KW-0274">FAD</keyword>
    <keyword evidence="10 19" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="12 19" id="KW-0521">NADP</keyword>
    <keyword evidence="15 19 21" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="14 19" id="KW-0573">Peptidoglycan synthesis</keyword>
    <keyword evidence="22" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FAD-binding PCMH-type" evidence="20">
        <location>
            <begin position="34"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="active site" evidence="19">
        <location>
            <position position="180"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="19">
        <location>
            <position position="229"/>
        </location>
    </feature>
    <feature type="active site" evidence="19">
        <location>
            <position position="299"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00003921"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00004752"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00012518"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00015188"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00022960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00022984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="ARBA" id="ARBA00031026"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00037"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="20">
        <source>
            <dbReference type="PROSITE" id="PS51387"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="21">
        <source>
            <dbReference type="EMBL" id="CTQ70810.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="22">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="319" mass="34159" checksum="B3F031B40B75CA83" modified="2015-12-09" version="1">MSFPDLLEEVPDLADGVRGKLTPNQPLSAVTWFRTGGPAQLMFQPADEDDLAVFLKKLPKDIPVLPVGLGSNLLIRDGGLKGVVVRLSAKGFGQIEELGNNRLRAGAAVPDKRLAEAAAKAGLGGFAFYTGIPGGLGGALRMNAGAHGTETRDRMIELTAIDRDGNRHVLTNSDMEYRYRHSGASSDLIFTSAVFEGVPQDEMTIREEMAAVVEHRENAQPIREKTGGSTFKNPDGNSAWKVVDAAGCRGLMVGGAQMSEMHCNFMINTGNATGHDLELLGETVRAKALEVTGTRLEWEIKRLGEFGSKGAIEPFLGQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABK4</accession>
    <name>A0A0M7ABK4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Glyceraldehyde-3-phosphate dehydrogenase 2</fullName>
            <ecNumber evidence="7">1.2.1.59</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">gapB</name>
        <name evidence="7" type="ORF">LAX5112_02925</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="5">Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.2.1.59" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71776.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672444.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02925"/>
    <dbReference type="EnsemblBacteria" id="CTQ71776">
        <property type="protein sequence ID" value="CTQ71776"/>
        <property type="gene ID" value="LAX5112_02925"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043891">
        <property type="term" value="F:glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020831">
        <property type="entry name" value="GlycerAld/Erythrose_P_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020829">
        <property type="entry name" value="GlycerAld_3-P_DH_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020828">
        <property type="entry name" value="GlycerAld_3-P_DH_NAD(P)-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43148">
        <property type="entry name" value="PTHR43148"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02800">
        <property type="entry name" value="Gp_dh_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00044">
        <property type="entry name" value="Gp_dh_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000149">
        <property type="entry name" value="GAP_DH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00078">
        <property type="entry name" value="G3PDHDRGNASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM00846">
        <property type="entry name" value="Gp_dh_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0520">NAD</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="1 7" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Gp_dh_N" evidence="6">
        <location>
            <begin position="1"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="2">
        <location>
            <position position="149"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="10"/>
            <end position="11"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="35"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="119"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="309"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="site" description="Activates thiol group during catalysis" evidence="4">
        <location>
            <position position="176"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR000149-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR000149-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR000149-4"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU000397"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM00846"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ71776.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="327" mass="34748" checksum="B99F5C176F5C19D8" modified="2015-12-09" version="1">MRIVINGFGRIGRTVLRQILRLPAGHSIDVVQINDIAALETCAYLFKYDSVFGPYPGSVEHTDDSLIVDGREIQFTCAPDISGFDLSGVDVVLECTGRADTRDVASRGLKAGARNVLISGPSAAADVTLVLGANEDQLGSHTIVSNGSCTTNALAPLLRGIDDAIGIETGHMTTVHCYTGSQPMVDAPRGPLERSRAGGVSMVPTTTSATKLLGVVLPQLDSKVSGAAVRVPSISVSAIDVTLTLKEPLEGGVNAQLQKIFQDSPVVGFTNDHVVSTDMRARPESLVVALPETLAVGDRQVRIFGWYDNEWGFSCRMIDMARLMAAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABL8</accession>
    <name>A0A0M7ABL8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02694</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71034.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672252.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ71034">
        <property type="protein sequence ID" value="CTQ71034"/>
        <property type="gene ID" value="LAX5112_02694"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="149"/>
            <end position="172"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71034.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="181" mass="20495" checksum="822AC63A4261B124" modified="2015-12-09" version="1">MFNPKEAADDSRALNIVILFFVAVAVIFSIGLHFDSALKYWLLSKFGETATGTVVQISKPSTDPNEMRDLARKSPRNYLKNRQTWVTGDSLLIEFQPRSGAFEYVSFKRPPGSTVGQAGKAIDIIYLPLNPRIAHPRVHLADFALDAKIMMGSLIAAMITFWLLVEAFVSWIRFRKTMRHY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABQ3</accession>
    <name>A0A0M7ABQ3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03135</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72309.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72309">
        <property type="protein sequence ID" value="CTQ72309"/>
        <property type="gene ID" value="LAX5112_03135"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ72309.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="36" mass="3964" checksum="BCE3118F7D8BF688" modified="2015-12-09" version="1">MEAMDVKGFSSRTYLVNDVDKTLLSTQKANVCKAAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABV2</accession>
    <name>A0A0M7ABV2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 5">N5-carboxyaminoimidazole ribonucleotide synthase</fullName>
            <shortName evidence="3 5">N5-CAIR synthase</shortName>
            <ecNumber evidence="3 5">6.3.4.18</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3 5">5-(carboxyamino)imidazole ribonucleotide synthetase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3 5 7" type="primary">purK</name>
        <name evidence="7" type="ORF">LAX5112_03153</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).</text>
    </comment>
    <comment type="function">
        <text evidence="5">Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)- to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3 5">
            <text>5-amino-1-(5-phospho-beta-D-ribosyl)imidazole + ATP + hydrogencarbonate = 5-carboxyamino-1-(5-phospho-D-ribosyl)imidazole + ADP + 2 H(+) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:19317"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17544"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58730"/>
            <dbReference type="ChEBI" id="CHEBI:137981"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.4.18"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3 5">Purine metabolism; IMP biosynthesis via de novo pathway; 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate from 5-amino-1-(5-phospho-D-ribosyl)imidazole (N5-CAIR route): step 1/2.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3 5">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 5">Belongs to the PurK/PurT family.</text>
    </comment>
    <dbReference type="EC" id="6.3.4.18" evidence="3 5"/>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72359.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672615.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03153"/>
    <dbReference type="EnsemblBacteria" id="CTQ72359">
        <property type="protein sequence ID" value="CTQ72359"/>
        <property type="gene ID" value="LAX5112_03153"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00074">
        <property type="reaction ID" value="UER00942"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034028">
        <property type="term" value="F:5-(carboxyamino)imidazole ribonucleotide synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004638">
        <property type="term" value="F:phosphoribosylaminoimidazole carboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006189">
        <property type="term" value="P:'de novo' IMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1490.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01928">
        <property type="entry name" value="PurK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011761">
        <property type="entry name" value="ATP-grasp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003135">
        <property type="entry name" value="ATP-grasp_carboxylate-amine"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013815">
        <property type="entry name" value="ATP_grasp_subdomain_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016185">
        <property type="entry name" value="PreATP-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005875">
        <property type="entry name" value="PurK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040686">
        <property type="entry name" value="PurK_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011054">
        <property type="entry name" value="Rudment_hybrid_motif"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02222">
        <property type="entry name" value="ATP-grasp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17769">
        <property type="entry name" value="PurK_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51246">
        <property type="entry name" value="SSF51246"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52440">
        <property type="entry name" value="SSF52440"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01161">
        <property type="entry name" value="purK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50975">
        <property type="entry name" value="ATP_GRASP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3 4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 5 7" id="KW-0436">Ligase</keyword>
    <keyword evidence="3 4 5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="1 3 5" id="KW-0658">Purine biosynthesis</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ATP-grasp" evidence="6">
        <location>
            <begin position="113"/>
            <end position="302"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="109"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="149"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="154"/>
            <end position="160"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="184"/>
            <end position="187"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="192"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="215"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="272"/>
            <end position="273"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00409"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU361200"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ72359.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="364" mass="39227" checksum="055A2E2B14A0D2CC" modified="2015-12-09" version="1">MSASIRLQPGDTIGILGGGQLGRMLAQSAASMGLKTHIFCPEQNSPAFDVSAQNTIAAYEDTAALAAFADAVSVVTYEFENVPGPTAQHLASKVPVRPGVRALEVSQDRLFEKEFLKKSGVAIADFAEITSQADVETAVQNFGGQGVLKTRRFGYDGKGQTMIRSNQDIGGAFERIGNTSAVLEALIGFDCEVSVIVARDLDGNCASYDIARNHHENHILKTSTVPAGVSEQTQTAARKMAERIVSSLDYVGVMGVEMFLVRDGDTEKLLVNEIAPRVHNSGHWTQDACLTSQFDQHIRAVAGWPLGSADRHSDAVMENLIGRDAEDWHAVLKDPAAQLHLYGKAEIRDGRKMGHVNRISPKTG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AC09</accession>
    <name>A0A0M7AC09_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative aminoacrylate hydrolase RutD</fullName>
            <ecNumber evidence="2">3.5.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">rutD</name>
        <name evidence="2" type="ORF">LAX5112_02978</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.5.1.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71936.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672482.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02978"/>
    <dbReference type="EnsemblBacteria" id="CTQ71936">
        <property type="protein sequence ID" value="CTQ71936"/>
        <property type="gene ID" value="LAX5112_02978"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000073">
        <property type="entry name" value="AB_hydrolase_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017497">
        <property type="entry name" value="Mg-chelatase_BchO"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12697">
        <property type="entry name" value="Abhydrolase_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03056">
        <property type="entry name" value="bchO_mg_che_rel"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AB hydrolase-1" evidence="1">
        <location>
            <begin position="45"/>
            <end position="290"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12697"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71936.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="306" mass="33137" checksum="A3DF388AE6FB71BF" modified="2015-12-09" version="1">MADRDWLNWDRDGQDWPYREASQFVEASGYRWHVQLLGRDAAPAFLLIHGTGAASFSWRNLVPFLENDYRLIVLDLPCHGFTRPTESPDLSLEGMTTAIRGLLHHLDLRPQFFLGHSAGSVIGISLVNATRHAKHAQDPAPQIFSVNGALKPIRGNRILSPMAKALFANPLSASMFSLLAKSTPLGNNLLTATGSRIDPLGDAIYQRLLGSSGHVRGALGMMASWDLSHLNAMLQRLSAPLQLYAAEDDPMVPPSSSRKAAALAPNGHLQLTPTGGHLVHESHPEGVANWMTEALQAARTNGADAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AD64</accession>
    <name>A0A0M7AD64_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Ribonuclease BN</fullName>
            <ecNumber evidence="2">3.1.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">rbn</name>
        <name evidence="2" type="ORF">LAX5112_03317</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.-.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72819.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03317"/>
    <dbReference type="EnsemblBacteria" id="CTQ72819">
        <property type="protein sequence ID" value="CTQ72819"/>
        <property type="gene ID" value="LAX5112_03317"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd07719">
        <property type="entry name" value="arylsulfatase_AtsA-like_MBL-fold"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.15.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044094">
        <property type="entry name" value="AtsA-like_MBL-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001279">
        <property type="entry name" value="Metallo-B-lactamas"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036866">
        <property type="entry name" value="RibonucZ/Hydroxyglut_hydro"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12706">
        <property type="entry name" value="Lactamase_B_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00849">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56281">
        <property type="entry name" value="SSF56281"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lactamase_B" evidence="1">
        <location>
            <begin position="28"/>
            <end position="231"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72819.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="289" mass="31483" checksum="F59632B0C0B6877F" modified="2015-12-09" version="1">MQGKADMDDRLVILGSKGGPAIRPGGPSPTSSLIEIGGRRCVIDCGLGVTRGLVGAGVSLKELDLIFITHMHSDHVLELGPLLHTAWTSGLAHKVKVFGPADLMEYWDGFLASMRYDIDLRIDDEGRPDLRDLVEIHLLAEGEVPLEESGLALKALRVDHPPVVDCFALRFDTKDWSVVFSADTAFFPPLAVFAKDCDVLVHEAMLQRGVDKIVEITGNGDRLRAHLWASHTMAPDAAKIAEMAQAKTLLLNHLIPADLPGFEEQEWLEATETFSGQTIVGHDGLVITK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AD87</accession>
    <name>A0A0M7AD87_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Acetyl-coenzyme A synthetase</fullName>
            <ecNumber evidence="5">6.2.1.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">acsA_2</name>
        <name evidence="5" type="ORF">LAX5112_03159</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="6.2.1.1" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72376.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008195132.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03159"/>
    <dbReference type="EnsemblBacteria" id="CTQ72376">
        <property type="protein sequence ID" value="CTQ72376"/>
        <property type="gene ID" value="LAX5112_03159"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003987">
        <property type="term" value="F:acetate-CoA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12780">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032387">
        <property type="entry name" value="ACAS_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025110">
        <property type="entry name" value="AMP-bd_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045851">
        <property type="entry name" value="AMP-bd_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020845">
        <property type="entry name" value="AMP-binding_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000873">
        <property type="entry name" value="AMP-dep_Synth/Lig"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042099">
        <property type="entry name" value="ANL_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16177">
        <property type="entry name" value="ACAS_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00501">
        <property type="entry name" value="AMP-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13193">
        <property type="entry name" value="AMP-binding_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00455">
        <property type="entry name" value="AMP_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0007">Acetylation</keyword>
    <keyword evidence="5" id="KW-0436">Ligase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ACAS_N" evidence="4">
        <location>
            <begin position="5"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="domain" description="AMP-binding" evidence="2">
        <location>
            <begin position="66"/>
            <end position="506"/>
        </location>
    </feature>
    <feature type="domain" description="AMP-binding_C" evidence="3">
        <location>
            <begin position="516"/>
            <end position="594"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022990"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF13193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF16177"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ72376.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="635" mass="69261" checksum="CF811232A1D66DE4" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEF6</accession>
    <name>A0A0M7AEF6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase</fullName>
            <ecNumber evidence="2">1.14.13.127</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">mhpA</name>
        <name evidence="2" type="ORF">LAX5112_03313</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.14.13.127" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72812.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672735.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03313"/>
    <dbReference type="EnsemblBacteria" id="CTQ72812">
        <property type="protein sequence ID" value="CTQ72812"/>
        <property type="gene ID" value="LAX5112_03313"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008688">
        <property type="term" value="F:3-(3-hydroxyphenyl)propionate hydroxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071949">
        <property type="term" value="F:FAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002938">
        <property type="entry name" value="FAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01494">
        <property type="entry name" value="FAD_binding_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FAD_binding_3" evidence="1">
        <location>
            <begin position="27"/>
            <end position="366"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01494"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72812.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="538" mass="60241" checksum="EF0333EC913FC4CD" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFI1</accession>
    <name>A0A0M7AFI1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Transcriptional regulatory protein WalR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">walR</name>
        <name evidence="6" type="ORF">LAX5112_03688</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ73905.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008195291.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03688"/>
    <dbReference type="EnsemblBacteria" id="CTQ73905">
        <property type="protein sequence ID" value="CTQ73905"/>
        <property type="gene ID" value="LAX5112_03688"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00383">
        <property type="entry name" value="trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001867">
        <property type="entry name" value="OmpR/PhoB-type_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016032">
        <property type="entry name" value="Sig_transdc_resp-reg_C-effctor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039420">
        <property type="entry name" value="WalR-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48111">
        <property type="entry name" value="PTHR48111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00486">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00862">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46894">
        <property type="entry name" value="SSF46894"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51755">
        <property type="entry name" value="OMPR_PHOB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="4">
        <location>
            <begin position="5"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="domain" description="OmpR/PhoB-type" evidence="5">
        <location>
            <begin position="128"/>
            <end position="227"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="OmpR/PhoB-type" evidence="3">
        <location>
            <begin position="128"/>
            <end position="227"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="2">
        <location>
            <position position="55"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ73905.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="227" mass="25440" checksum="FD70D311E662BEDB" modified="2015-12-09" version="1">MTARTILIVDDDTELREALVEQLSLYDEFETLQADTATSGIGMAKEEHIDLLLMDVGLPDIDGREAVKLLRKNGFKAPIIMLTGHDGDSDTILGLEAGANDYVTKPFKFAVLLARVRAHLRQHEQSEDATFAIGRYSFRPAAKVMQEDNGSKVRLTEKETSILKFLYRAGEKPVTRDVLLHEVWGYNSGVTTHTLETHIYRLRQKIERDPSNAELLVTEAGGYKLVP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFM8</accession>
    <name>A0A0M7AFM8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative secreted protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03472</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73242.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672865.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03472"/>
    <dbReference type="EnsemblBacteria" id="CTQ73242">
        <property type="protein sequence ID" value="CTQ73242"/>
        <property type="gene ID" value="LAX5112_03472"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009935">
        <property type="entry name" value="DUF1467"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07330">
        <property type="entry name" value="DUF1467"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="53"/>
            <end position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73242.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="96" mass="10795" checksum="0DA611A2CB0A6817" modified="2015-12-09" version="1">MSLAFSLAIFFMMWWIILFAMLPFGMRRTQEEAGEVIPGSEASAPERPRMLRVLLMTTVVTCVLFAGYMWLRSSGFGLDDIPFFMPPSESYSTPGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFX1</accession>
    <name>A0A0M7AFX1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Family finger-like domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_03715</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ73978.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673050.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03715"/>
    <dbReference type="EnsemblBacteria" id="CTQ73978">
        <property type="protein sequence ID" value="CTQ73978"/>
        <property type="gene ID" value="LAX5112_03715"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011723">
        <property type="entry name" value="Znf/thioredoxin_put"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13717">
        <property type="entry name" value="zinc_ribbon_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02098">
        <property type="entry name" value="MJ0042_CXXC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="173"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="domain" description="Znf/thioredoxin_put" evidence="3">
        <location>
            <begin position="1"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="37"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="54"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="75"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="97"/>
            <end position="115"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF13717"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ73978.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="317" mass="34930" checksum="8FC1CDBBF32F9DE5" modified="2015-12-09" version="1">MKITCPECSTSYEIKPEALGPEGRSVKCAKCSNRWFVSPKDEDKDTAAFEADATEDDSPGKPAPDNKTDTAKDEEDWAADADDGVDDPDGFGGEDDPEPVADVKPPKKDTSPNKAEAGSKKTASNAAPDADPKSADIETLAKRPKIIVNPDKFRTNRIGAIIDWLLRRNFRRIGGVLLLGGALAMTVMLVLMRDTLVKQSPDLASLYSMVGLGVNLRGLEFRNLRTFMEVEDGRRVLVVEGSIRNLQKERNSVPAVRLSIRSADFQEVYAWTVEPRTKNLNALDETRFRTILADPPAGASDIQVRFVDRDQRNIVLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AG68</accession>
    <name>A0A0M7AG68_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Conjugal transfer relaxase TraA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03244</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72614.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008196598.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03244"/>
    <dbReference type="EnsemblBacteria" id="CTQ72614">
        <property type="protein sequence ID" value="CTQ72614"/>
        <property type="gene ID" value="LAX5112_03244"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027785">
        <property type="entry name" value="UvrD-like_helicase_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13538">
        <property type="entry name" value="UvrD_C_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="UvrD_C_2" evidence="1">
        <location>
            <begin position="324"/>
            <end position="372"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13538"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72614.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="373" mass="41747" checksum="EDC07669C78B245D" modified="2015-12-09" version="1">MAWSPQQDTALKEAAAWLKRGDRQVFRLFGFAGTGKTTLARHLAEDIDGDVCFGAFTGKAAHVLRQKGCEDAGTIHSLIYRPRSAKEEEAVDDDEEDAGPQFAIKRDSAAATARLIVIDECSMVDEELGRDLLSFGTPVLVLGDPAQLPPVKGGGFFTEAEPDIMLTEVHRQAQDNPIVRMSMTIRDGGKLEYGDFGESKVINRRQIDKDQILAADQVLVGTNKTRRLYNSRIRELKDFTTPMPAVGDKLVCLRNDKTKGLLNGGLWTVKRLRQPRGNTLRFDVVSEDELIKTAVKVKVLPSMFEDGAESIPYAIRRKADEFDYGYALTVHKAQGSQWDDVVLFDESWAFREHRDRWLYTAVTRAAERITVVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGF0</accession>
    <name>A0A0M7AGF0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Putative membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">LAX5112_03559</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the UPF0126 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73512.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672929.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03559"/>
    <dbReference type="EnsemblBacteria" id="CTQ73512">
        <property type="protein sequence ID" value="CTQ73512"/>
        <property type="gene ID" value="LAX5112_03559"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005115">
        <property type="entry name" value="Gly_transporter"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03458">
        <property type="entry name" value="Gly_transporter"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="6"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="29"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="62"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="114"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="171"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="domain" description="Gly_transporter" evidence="8">
        <location>
            <begin position="5"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="domain" description="Gly_transporter" evidence="8">
        <location>
            <begin position="90"/>
            <end position="163"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF03458"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ73512.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="203" mass="21607" checksum="06E7B598F833E62B" modified="2015-12-09" version="1">MLLQLLDYLGVAVFAVTGGIVASRKQLDFIAFLFFATLTGIGGGTLRDLLLGVPVFWVVNEAYLVVCLVVSVFLWFFAHWIERFNKPLRWADAVGVSAYSVMGAAKALNVGDTLLVAVLMGVSTATFGGVLRDTLAQEPSSIVKSEIYVSAAFAGAGSYVLLAQFGVVPWVAAILAGSVAMILRGGAILHGWSLPGYGHRRRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AH06</accession>
    <name>A0A0M7AH06_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">L-asparaginase II</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03411</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ73033.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672810.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03411"/>
    <dbReference type="EnsemblBacteria" id="CTQ73033">
        <property type="protein sequence ID" value="CTQ73033"/>
        <property type="gene ID" value="LAX5112_03411"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010349">
        <property type="entry name" value="Asparaginase_II"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42110">
        <property type="entry name" value="PTHR42110"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06089">
        <property type="entry name" value="Asparaginase_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ73033.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="344" mass="36637" checksum="59958F9A01976205" modified="2015-12-09" version="1">MTNPALVDVTRGQLTESLHRGSVAVVDAGGKLVCGVGDFEARVFPRSAIKALQAIPLVESGAAEALDLSDAELSLACASHNGEEVHANSTRVMLMKAGLTEDDLECGPQWPSRMEDAAKLILADETPCGLHNNCSGKHAGFLGLAKVMGVETKGYVEPSHPVQREIRNVMEQMTGDIVSEDVCGTDGCSIPTYASPLNSFARAFAAFGTGEGLEPLRQDAAQRIFDACINEPYMVAGADRFCTKVMEGFRGRVFVKTGAEGVFCASIPEFGYGVALKCDDGATRAAEVMMATVLEVMLELDESEAKLLDGLVNPPVLTRRGAEAGVIRPRQEFLQMLKEALPAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHB5</accession>
    <name>A0A0M7AHB5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03882</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74498.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673187.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74498">
        <property type="protein sequence ID" value="CTQ74498"/>
        <property type="gene ID" value="LAX5112_03882"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013216">
        <property type="entry name" value="Methyltransf_11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08241">
        <property type="entry name" value="Methyltransf_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <keyword evidence="2" id="KW-0830">Ubiquinone</keyword>
    <feature type="domain" description="Methyltransf_11" evidence="1">
        <location>
            <begin position="82"/>
            <end position="176"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08241"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74498.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="236" mass="26132" checksum="0A4937425E8DEEE0" modified="2015-12-09" version="1">MSDKTVHSDSAFMARRDAARDRIDALTGAKGGAADDRLAWFHTVYREAGGDPAAVPWADLTPKEAIVEWLLENPGNGKRAIDIGCGLGDNAEALAAAGYKTEAFDLSEDAILWAQKRFPDSSVSYRAADLFQLPSEWLAAFDLVQECYTIQALDGDLRTKAIEVMAGLVAPGGQLLLINRSQDETGAAKGPPWPMKPSEWQRFETFGLTMVREEFYEIERPGRIIPHVRAVFFRKW</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHC1</accession>
    <name>A0A0M7AHC1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03660</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73796.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673002.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ73796">
        <property type="protein sequence ID" value="CTQ73796"/>
        <property type="gene ID" value="LAX5112_03660"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="14"/>
            <end position="46"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73796.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="76" mass="7993" checksum="8B5590A1C88568DC" modified="2015-12-09" version="1">MTADDRKPAMKSVNKPNSLRSRGFLSQPGSQVASGDGSSAKPNKSRGKRQSVVADDGKPAHLTTKVAIPPYKLGDT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHF5</accession>
    <name>A0A0M7AHF5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_03895</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74538.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74538">
        <property type="protein sequence ID" value="CTQ74538"/>
        <property type="gene ID" value="LAX5112_03895"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809489" evidence="3">
        <location>
            <begin position="26"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="49"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="151"/>
            <end position="206"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ74538.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="206" mass="22882" checksum="FEC5533B92AF2AC1" modified="2015-12-09" version="1">MKPSQLICRTLLLLFTALLSIPARASSTDVGEQTVPWWSSPGETDTTAFSALVFLFLLLFAVFHMYARFDRFAEKHNEGTPLQTTIPTLLMIAFAYEIFPPLSHFSILLPLSLIATALARDLMLWFEPMKEHTLKGELEGIMLEELQHEHLGEHDRDGKRVRTAPKQASGQAVTAKTDNLEPERPDTPPPSPVTPSDKSKGGTGND</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHI8</accession>
    <name>A0A0M7AHI8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase</fullName>
            <ecNumber evidence="2">3.6.1.40</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">gppA_1</name>
        <name evidence="2" type="ORF">LAX5112_03905</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.6.1.40" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74568.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673208.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03905"/>
    <dbReference type="EnsemblBacteria" id="CTQ74568">
        <property type="protein sequence ID" value="CTQ74568"/>
        <property type="gene ID" value="LAX5112_03905"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008894">
        <property type="term" value="F:guanosine-5'-triphosphate,3'-diphosphate diphosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003695">
        <property type="entry name" value="Ppx_GppA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02541">
        <property type="entry name" value="Ppx-GppA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="SSF53067"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ppx-GppA" evidence="1">
        <location>
            <begin position="31"/>
            <end position="310"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02541"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74568.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="507" mass="55133" checksum="1633FB0170F38DDF" modified="2015-12-09" version="1">MSSQHQPARGRLNGTGPIAVVDIGSNSVRLVIYERKARTPTMLFNEKMLAGLGRGVAATGQLADGSVKAALGELVRFRALIRHTGCQDIYIVATAATRDAENGPDFVREVEAILGAPVRILDGNEEAYFSALGVTAGFWQPRGLVGDMGGGSLELVEVDDKGPGLGMTFPLGGLRLAEMAESSIEKASEIAEATLKDFHWPDLPPGERTFYAVGGTWRSLGRLHLMQKNYPLHVMHNYQINADEAIEFCRKIAVPDLEGVELAEVVSKQRRPLVPIGAVVLERVLTAMKAERLVFSATGVREGLLHSKLSPEMQAQDPVIEAARELCVLRARSPQFAEELIAWSDSLFHMLSIEETGNETRLRHAACLLSDIGWRAHPDYRGEQSLNIISNASFVGLDHASRAYLSAAVFYRHEGLREGALSTVIRELFTDRLRIRAKVLGATLRVASLLSASMGGMLPKVGISMQGEELVLDLGTELADLDGERLRKRVGQLSKCIDAPVSVRVSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIJ8</accession>
    <name>A0A0M7AIJ8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Phosphopantetheine adenylyltransferase</fullName>
            <ecNumber evidence="6">2.7.7.3</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Dephospho-CoA pyrophosphorylase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">Pantetheine-phosphate adenylyltransferase</fullName>
            <shortName evidence="6">PPAT</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6 8" type="primary">coaD</name>
        <name evidence="8" type="ORF">LAX5112_04035</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Reversibly transfers an adenylyl group from ATP to 4'-phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5 6">
            <text>(R)-4'-phosphopantetheine + ATP + H(+) = 3'-dephospho-CoA + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:19801"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57328"/>
            <dbReference type="ChEBI" id="CHEBI:61723"/>
            <dbReference type="EC" id="2.7.7.3"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="6">Cofactor biosynthesis; coenzyme A biosynthesis; CoA from (R)-pantothenate: step 4/5.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Homohexamer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the bacterial CoaD family.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.3" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ74918.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673325.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04035"/>
    <dbReference type="EnsemblBacteria" id="CTQ74918">
        <property type="protein sequence ID" value="CTQ74918"/>
        <property type="gene ID" value="LAX5112_04035"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00241">
        <property type="reaction ID" value="UER00355"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004595">
        <property type="term" value="F:pantetheine-phosphate adenylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015937">
        <property type="term" value="P:coenzyme A biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd02163">
        <property type="entry name" value="PPAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00151">
        <property type="entry name" value="PPAT_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004821">
        <property type="entry name" value="Cyt_trans-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001980">
        <property type="entry name" value="PPAT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21342:SF1">
        <property type="entry name" value="PTHR21342:SF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01467">
        <property type="entry name" value="CTP_transf_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01020">
        <property type="entry name" value="LPSBIOSNTHSS"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01510">
        <property type="entry name" value="coaD_prev_kdtB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00125">
        <property type="entry name" value="cyt_tran_rel"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 6" id="KW-0173">Coenzyme A biosynthesis</keyword>
    <keyword evidence="1 6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 6" id="KW-0460">Magnesium</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="2 6 8" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 8" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="CTP_transf_like" evidence="7">
        <location>
            <begin position="6"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="10"/>
            <end position="11"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="10"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="18"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="42"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="80"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="94"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="95"/>
            <end position="97"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="105"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="130"/>
            <end position="136"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="site" description="Transition state stabilizer" evidence="6">
        <location>
            <position position="18"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022993"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00029346"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00151"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF01467"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ74918.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="167" mass="18298" checksum="2EB460D83273C654" modified="2015-12-09" version="1">MTRIALYPGSFDPVTNGHMDILRQSLALADKVVVAIGIHPGKKPLFSFEERVELIHISAVAEFSEAEASRIEVIAFSDLVINTARTQKADYLVRGLRDGTDLDYEMQMAGMNGTLEPDIKTVFLPASPAVRHITATLVRQIAQMGGEISAFVPDPVADPLRQRARPD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIS9</accession>
    <name>A0A0M7AIS9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 5">Flagellar hook protein FlgE</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">flgE_2</name>
        <name evidence="9" type="ORF">LAX5112_04084</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 5">Bacterial flagellum basal body</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the flagella basal body rod proteins family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ75008.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673355.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04084"/>
    <dbReference type="EnsemblBacteria" id="CTQ75008">
        <property type="protein sequence ID" value="CTQ75008"/>
        <property type="gene ID" value="LAX5112_04084"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009425">
        <property type="term" value="C:bacterial-type flagellum basal body"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.98.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011491">
        <property type="entry name" value="Falgellar_hook_FlgE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037058">
        <property type="entry name" value="Falgellar_hook_FlgE_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001444">
        <property type="entry name" value="Flag_bb_rod_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019776">
        <property type="entry name" value="Flagellar_basal_body_rod_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020013">
        <property type="entry name" value="Flagellar_FlgE/F/G"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010930">
        <property type="entry name" value="Flg_bb/hook_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037925">
        <property type="entry name" value="FlgE/F/G-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07559">
        <property type="entry name" value="FlaE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00460">
        <property type="entry name" value="Flg_bb_rod"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06429">
        <property type="entry name" value="Flg_bbr_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF117143">
        <property type="entry name" value="SSF117143"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03506">
        <property type="entry name" value="FlgEFG_subfam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00588">
        <property type="entry name" value="FLAGELLA_BB_ROD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0975">Bacterial flagellum</keyword>
    <keyword evidence="9" id="KW-0966">Cell projection</keyword>
    <keyword evidence="9" id="KW-0969">Cilium</keyword>
    <keyword evidence="9" id="KW-0282">Flagellum</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Flg_bb_rod" evidence="6">
        <location>
            <begin position="7"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="domain" description="FlaE" evidence="8">
        <location>
            <begin position="191"/>
            <end position="306"/>
        </location>
    </feature>
    <feature type="domain" description="Flg_bbr_C" evidence="7">
        <location>
            <begin position="349"/>
            <end position="425"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009677"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00019015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023143"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU362116"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00460"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF06429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF07559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ75008.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="427" mass="44279" checksum="9D4783F6298C246A" modified="2015-12-09" version="1">MGLSGIMRTGVSGMNAQSSKLGAVADNIANSSTTGYKRAETEFASQVLAQGGGSYNSGGVQAHTKYAISDQGSMSFTTSKLDLAVDGNGFFIVSDSTGAGASQALTRAGSFVPDGQGYLVNTAGMYLQGYPITNGNAPSVVANGLGGLEPVNITQNQLEATPTSTATLHANVDEDSAIVAAANLPSVNAATAEYSHKTSMVVYDNLGNEVTLDVYYTKTTDTPPTTDWEVTVYNAADRDPATGGFPYGAANIGTSTIQFDTTTGQRTGAVTAVNITVPNGGTYDIDLENSTYTDAGFTVTNVDADGNAPSSVEKVEFGEDGTLYSIYTNGDRRPIYKIPLADVPSPDKLDPVSGNIYRPSIDSGDVRVGFPGDGGLGELAVGALEGSNVDLANELTSMIESQRTYTANSQVFKAGSDLMQELVNLVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIZ4</accession>
    <name>A0A0M7AIZ4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Phosphoribosylglycinamide formyltransferase</fullName>
            <ecNumber evidence="3">2.1.2.2</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">5'-phosphoribosylglycinamide transformylase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="3">GAR transformylase</fullName>
            <shortName evidence="3">GART</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3 5" type="primary">purN</name>
        <name evidence="5" type="ORF">LAX5112_03900</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Catalyzes the transfer of a formyl group from 10-formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>(6S)-10-formyltetrahydrofolate + N(1)-(5-phospho-beta-D-ribosyl)glycinamide = (6S)-5,6,7,8-tetrahydrofolate + H(+) + N(2)-formyl-N(1)-(5-phospho-beta-D-ribosyl)glycinamide</text>
            <dbReference type="Rhea" id="RHEA:15053"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57453"/>
            <dbReference type="ChEBI" id="CHEBI:57454"/>
            <dbReference type="ChEBI" id="CHEBI:143788"/>
            <dbReference type="ChEBI" id="CHEBI:147286"/>
            <dbReference type="EC" id="2.1.2.2"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1 3">Purine metabolism; IMP biosynthesis via de novo pathway; N(2)-formyl-N(1)-(5-phospho-D-ribosyl)glycinamide from N(1)-(5-phospho-D-ribosyl)glycinamide (10-formyl THF route): step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the GART family.</text>
    </comment>
    <dbReference type="EC" id="2.1.2.2" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74551.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673204.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03900"/>
    <dbReference type="EnsemblBacteria" id="CTQ74551">
        <property type="protein sequence ID" value="CTQ74551"/>
        <property type="gene ID" value="LAX5112_03900"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00074">
        <property type="reaction ID" value="UER00126"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004644">
        <property type="term" value="F:phosphoribosylglycinamide formyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006189">
        <property type="term" value="P:'de novo' IMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd08645">
        <property type="entry name" value="FMT_core_GART"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01930">
        <property type="entry name" value="PurN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002376">
        <property type="entry name" value="Formyl_transf_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036477">
        <property type="entry name" value="Formyl_transf_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004607">
        <property type="entry name" value="GART"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001555">
        <property type="entry name" value="GART_AS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00551">
        <property type="entry name" value="Formyl_trans_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53328">
        <property type="entry name" value="SSF53328"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00639">
        <property type="entry name" value="PurN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00373">
        <property type="entry name" value="GART"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3" id="KW-0658">Purine biosynthesis</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Formyl_trans_N" evidence="4">
        <location>
            <begin position="4"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="region of interest" description="5'-phosphoribosylglycinamide binding" evidence="3">
        <location>
            <begin position="14"/>
            <end position="16"/>
        </location>
    </feature>
    <feature type="region of interest" description="10-formyltetrahydrofolate binding" evidence="3">
        <location>
            <begin position="93"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="3">
        <location>
            <position position="112"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="68"/>
        </location>
        <ligand>
            <name>(6S)-10-formyltetrahydrofolate</name>
            <dbReference type="ChEBI" id="CHEBI:57454"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="110"/>
        </location>
        <ligand>
            <name>(6S)-10-formyltetrahydrofolate</name>
            <dbReference type="ChEBI" id="CHEBI:57454"/>
        </ligand>
    </feature>
    <feature type="site" description="Raises pKa of active site His" evidence="3">
        <location>
            <position position="148"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01930"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00551"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ74551.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="216" mass="22943" checksum="93D78B2D6929E2D1" modified="2015-12-09" version="1">MSRKKTAILISGRGSNMGALISAAMDPAFPAEISLVVSNRPDAKGLERAKEFGIATAVVDHTEYGGDRQAFERSVDEVLKAAKIDLVALAGFMRILSPYLVNAWAGRMINIHPALLPSFKGLATHERALEEGVKLHGATVHFVSAEMDDGPIITQGAVPVLDQDTPDSLAARVLKVEHKIYPKALLLVASGKAKIKGGTKVATGDTEDTAAPLIWP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJM1</accession>
    <name>A0A0M7AJM1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03996</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74837.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74837">
        <property type="protein sequence ID" value="CTQ74837"/>
        <property type="gene ID" value="LAX5112_03996"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ74837.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="356" mass="40677" checksum="785ECAA0C94B492C" modified="2015-12-09" version="1">MYLDPDFPMDDIRLIASDLESANNLIPGFVPPDAGLLSVAAMYYAAEVDKQELFLLPDRNVVTRIAGIARDGMPKSVDLPTALSAKVMAYAQCLSLQFEPSIAYHELAHSKGNAVAIDELRWFRKGDVSQPQAWVDLALGRRKVIDQIDVEVEVERDLAFPLHRWRRNYLVSLKIAELELKDTQPISRVLDLFNWMQEDFLIAGPALIFATMYFAPKSPKRNMLKQLKSRDRSRAISGIRNAAWDITHLSDFVKRVLEGNEQNRRYILVTADKAMGTLAPLLLWNFDDEEDLIEPLVFRLQEWWPQKEAVSIAENMVAPLKIASGKSERKRPNFDNGTLDEWTVRAEEKILNWRPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJR8</accession>
    <name>A0A0M7AJR8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Inner membrane protein YiaV</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">yiaV_3</name>
        <name evidence="6" type="ORF">LAX5112_04024</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74887.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673307.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04024"/>
    <dbReference type="EnsemblBacteria" id="CTQ74887">
        <property type="protein sequence ID" value="CTQ74887"/>
        <property type="gene ID" value="LAX5112_04024"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043602">
        <property type="entry name" value="CusB_dom_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032317">
        <property type="entry name" value="HlyD_D23"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00529">
        <property type="entry name" value="CusB_dom_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16576">
        <property type="entry name" value="HlyD_D23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="6"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="29"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="domain" description="CusB_dom_1" evidence="4">
        <location>
            <begin position="20"/>
            <end position="335"/>
        </location>
    </feature>
    <feature type="domain" description="HlyD_D23" evidence="5">
        <location>
            <begin position="79"/>
            <end position="300"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="101"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="167"/>
            <end position="194"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00529"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF16576"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ74887.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="383" mass="42185" checksum="4E13668F4522C632" modified="2015-12-09" version="1">MTIALLILGAYGIFAWLVFYKFKLLKFNVAWGVVTFWVGFHVLFLLVVLLRFFAPYTIDGHVIRQTIQIAPRLPHPTLLQDVFVTQNQPVKKGDKLYQFESTLYDAQLAEAQANLVEAQQNALILQEDVVLAQDQLAQAEANETFAAEQVKRYTDLVPKGGARQETLDQWTAQLAGAKAQVAEAEANVTKAQLAVAAQIDGVNAQVAAAQAQVEQAQYYVDQTTIFAPEDGRIISQQARPGLVVGGFRIASIAAFVADANPYFLATFYQEHLKFVEPGQPVEVALDIYPGQVFTGKVKAIWEGTGQGQIKPSGNVPNFLFMHPQGRFAVEIVMDEDPALKRFPGGAHGAAAIYTGGGGEWVSVLRRVNMRLYAWVNFIIPFDV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKF2</accession>
    <name>A0A0M7AKF2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04037</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ74922.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74922">
        <property type="protein sequence ID" value="CTQ74922"/>
        <property type="gene ID" value="LAX5112_04037"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ74922.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="70" mass="7554" checksum="64475AF2631C6524" modified="2015-12-09" version="1">MTKTHATRRPRPATWARTTLIKNYEDLGIAALHAALVCQNFCSTAQTTQQVSTWHGAPNMSGILAGVAES</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKS0</accession>
    <name>A0A0M7AKS0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Putative HTH-type transcriptional regulator YbaQ</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">ybaQ</name>
        <name evidence="1" type="ORF">LAX5112_04252</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75479.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75479">
        <property type="protein sequence ID" value="CTQ75479"/>
        <property type="gene ID" value="LAX5112_04252"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013430">
        <property type="entry name" value="Toxin_antidote_HigA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36924">
        <property type="entry name" value="PTHR36924"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02607">
        <property type="entry name" value="antidote_HigA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ75479.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="98" mass="10948" checksum="BEF9E17712FD361A" modified="2015-12-09" version="1">MIEDMYLQPLNMSMADLAKVISPCPSAAEQLLSDDIYITAELALCLARAFDTTAQFWINMQVHYDMQQALVSPDFQAVLDRIKPIVEAGKPIQSTDNI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKT9</accession>
    <name>A0A0M7AKT9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">TPR_21 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_03852</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74403.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673166.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03852"/>
    <dbReference type="EnsemblBacteria" id="CTQ74403">
        <property type="protein sequence ID" value="CTQ74403"/>
        <property type="gene ID" value="LAX5112_03852"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018704">
        <property type="entry name" value="TPR_21"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09976">
        <property type="entry name" value="TPR_21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0143">Chaperone</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="24"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="domain" description="TPR_21" evidence="3">
        <location>
            <begin position="19"/>
            <end position="169"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF09976"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ74403.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="225" mass="24354" checksum="EB58D90D467BF38E" modified="2015-12-09" version="1">MSDIFREVDEDIRHEKYRRLWDRFGSWVIAVAVLIVVGTGGYRGWLYWQDTQSQSAGDTFLEAVSLSEAGQYSEAARLYTELGSSIGGYPALAQMRQATDKANAGDATAALAEFDALSRDSNLAPALQNVAALRAAYIAVDSEPYDAIADRIESLTGDTDAFRAAARELLALSAWKNGDAETALTWITALEDDAETPQDIRQRVTLLGGLIRGQTGTPAEEGTAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALV5</accession>
    <name>A0A0M7ALV5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04147</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75210.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673400.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04147"/>
    <dbReference type="EnsemblBacteria" id="CTQ75210">
        <property type="protein sequence ID" value="CTQ75210"/>
        <property type="gene ID" value="LAX5112_04147"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ75210.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="173" mass="18306" checksum="03B65470523A41B9" modified="2015-12-09" version="1">MPHKTEFPILRILKVVGGLLLIGGLAACQGANPPPAAINTTPVAPSFIQPIDEQQGTTFAFEPFTGAPGNIADELSNEIGQQAALRGLKLVRRVGADATYRVNGYLSATGQPGKGTVFYVFDIVDRSGRRLKRISGAEETGGSTGDPWTGATSTVLTRIAERSVVEISAWLNR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMB4</accession>
    <name>A0A0M7AMB4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">RutC family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04291</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000022">
        <property type="protein sequence ID" value="CTQ75582.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008192058.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000022.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04291"/>
    <dbReference type="EnsemblBacteria" id="CTQ75582">
        <property type="protein sequence ID" value="CTQ75582"/>
        <property type="gene ID" value="LAX5112_04291"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035959">
        <property type="entry name" value="RutC-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006175">
        <property type="entry name" value="YjgF/YER057c/UK114"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11803">
        <property type="entry name" value="PTHR11803"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01042">
        <property type="entry name" value="Ribonuc_L-PSP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55298">
        <property type="entry name" value="SSF55298"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ75582.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="131" mass="14386" checksum="CC890B4B03D8C645" modified="2015-12-09" version="1">MSHKIIHPDGWAPAKGYANGVLSRKGVLHIGGQIGWNADQVFETHDFIGQMEQALRNILDVVLAAGGKAEDIVRLTWFVTDKKEYLARQSEIGAIYRKVMGRHFPAMSMVVVAGLIEDEALVEIEATAEIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMC1</accession>
    <name>A0A0M7AMC1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Enamine/imine deaminase</fullName>
            <ecNumber evidence="1">3.5.4.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yabJ_3</name>
        <name evidence="1" type="ORF">LAX5112_04363</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.5.4.-" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75797.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04363"/>
    <dbReference type="EnsemblBacteria" id="CTQ75797">
        <property type="protein sequence ID" value="CTQ75797"/>
        <property type="gene ID" value="LAX5112_04363"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035959">
        <property type="entry name" value="RutC-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006175">
        <property type="entry name" value="YjgF/YER057c/UK114"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11803">
        <property type="entry name" value="PTHR11803"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01042">
        <property type="entry name" value="Ribonuc_L-PSP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55298">
        <property type="entry name" value="SSF55298"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ75797.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="130" mass="14294" checksum="C39CFBAB33EA3583" modified="2015-12-09" version="1">MLPIHHMIDQGPRPVAPFSHAVEADGWVFVTGQMPTDPDAPDAPLPAGIEAQTARVMDNLKIVLEGLGLGLENVTFARVYLTEFERDYAQMNETYRSYFEEGKLPGRTCIGVTALAVSALVEIDLVVRRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMM0</accession>
    <name>A0A0M7AMM0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04000</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74844.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04000"/>
    <dbReference type="EnsemblBacteria" id="CTQ74844">
        <property type="protein sequence ID" value="CTQ74844"/>
        <property type="gene ID" value="LAX5112_04000"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010293">
        <property type="entry name" value="Sbt_1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR40400">
        <property type="entry name" value="PTHR40400"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05982">
        <property type="entry name" value="Sbt_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="26"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="82"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="116"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="147"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="190"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="220"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="253"/>
            <end position="277"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="283"/>
            <end position="302"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="314"/>
            <end position="336"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74844.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="344" mass="35634" checksum="537A23D0ED333D24" modified="2015-12-09" version="1">MARENQIKQGRPEVIETILGLAAQNLLSPIILFFALGLGAAFVRSDLTIPEAAAKSLSIYLLFAIGFKGGVSVSAHGIDTTLILSLIAGLILSFALPFLAFALLRGMTRLSTVDAAAVAGHYGSISIVTFVAATSVLQSQGIASEGYLVAVAAVMEAPAILSALWIVARFSTSAEAKEREQDTQGLWREILLNGSIVLLVGSFLIGFLTGEDGLKEIESFIVSPFKGVLCLFLLDMGLVAGRGLRASAHQLRPGLISFGILMPVLGSAAGLIAASLIGLSTGGAVLLMTLSASASYIAVPAAMRVALPEANPSIYLTMSLGITFPFNLTLGIPLYLSVAQAVGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AN31</accession>
    <name>A0A0M7AN31_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_04413</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75931.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673623.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000023.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75931">
        <property type="protein sequence ID" value="CTQ75931"/>
        <property type="gene ID" value="LAX5112_04413"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="21"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="57"/>
            <end position="105"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ75931.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="121" mass="13336" checksum="EF0BFF75911A0FEF" modified="2015-12-09" version="1">MIWMAVSTYIEKTIGRRRAKIALAVLALAIGLYGFHVLDKNAAVKAAKEGLVSRVELSAAKAELKVLKDRAAALEAANFQFQRQLQEAEALQTRQALELEDYESTVDAVVGPALLEQLRNR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANM8</accession>
    <name>A0A0M7ANM8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="13">Methyl-accepting chemotaxis protein 4</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">mcp4_16</name>
        <name evidence="13" type="ORF">LAX5112_04152</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the methyl-accepting chemotaxis (MCP) protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75224.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673404.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75224">
        <property type="protein sequence ID" value="CTQ75224"/>
        <property type="gene ID" value="LAX5112_04152"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004888">
        <property type="term" value="F:transmembrane signaling receptor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006935">
        <property type="term" value="P:chemotaxis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004090">
        <property type="entry name" value="Chemotax_Me-accpt_rcpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033479">
        <property type="entry name" value="dCache_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004089">
        <property type="entry name" value="MCPsignal_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000727">
        <property type="entry name" value="T_SNARE_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02743">
        <property type="entry name" value="dCache_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00015">
        <property type="entry name" value="MCPsignal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00260">
        <property type="entry name" value="CHEMTRNSDUCR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00283">
        <property type="entry name" value="MA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50111">
        <property type="entry name" value="CHEMOTAXIS_TRANSDUC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50192">
        <property type="entry name" value="T_SNARE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 8" id="KW-0807">Transducer</keyword>
    <keyword evidence="3 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 9" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="7"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="338"/>
            <end position="359"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="12">
        <location>
            <begin position="359"/>
            <end position="412"/>
        </location>
    </feature>
    <feature type="domain" description="Methyl-accepting transducer" evidence="10">
        <location>
            <begin position="445"/>
            <end position="688"/>
        </location>
    </feature>
    <feature type="domain" description="T-SNARE coiled-coil homology" evidence="11">
        <location>
            <begin position="604"/>
            <end position="666"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023224"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00029447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="CTQ75224.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="708" mass="74475" checksum="C7EBF4A827B342BB" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANS0</accession>
    <name>A0A0M7ANS0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative glycosyltransferase EpsE</fullName>
            <ecNumber evidence="3">2.4.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">epsE</name>
        <name evidence="3" type="ORF">LAX5112_04230</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.4.-.-" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75433.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673466.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000021.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04230"/>
    <dbReference type="EnsemblBacteria" id="CTQ75433">
        <property type="protein sequence ID" value="CTQ75433"/>
        <property type="gene ID" value="LAX5112_04230"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016757">
        <property type="term" value="F:glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001173">
        <property type="entry name" value="Glyco_trans_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00535">
        <property type="entry name" value="Glycos_transf_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glyco_trans_2-like" evidence="2">
        <location>
            <begin position="489"/>
            <end position="600"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="306"/>
            <end position="333"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00535"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ75433.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="1117" mass="124640" checksum="FF775392AB38261D" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APM4</accession>
    <name>A0A0M7APM4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Formyltetrahydrofolate deformylase</fullName>
            <ecNumber evidence="3">3.5.1.10</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">Formyl-FH(4) hydrolase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3 5" type="primary">purU</name>
        <name evidence="5" type="ORF">LAX5112_04798</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>(6S)-10-formyltetrahydrofolate + H2O = (6S)-5,6,7,8-tetrahydrofolate + formate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:19833"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15740"/>
            <dbReference type="ChEBI" id="CHEBI:57453"/>
            <dbReference type="ChEBI" id="CHEBI:57454"/>
            <dbReference type="EC" id="3.5.1.10"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3">Purine metabolism; IMP biosynthesis via de novo pathway; formate from 10-formyl-5,6,7,8-tetrahydrofolate: step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the PurU family.</text>
    </comment>
    <dbReference type="EC" id="3.5.1.10" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000031">
        <property type="protein sequence ID" value="CTQ77088.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008191544.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000031.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04798"/>
    <dbReference type="EnsemblBacteria" id="CTQ77088">
        <property type="protein sequence ID" value="CTQ77088"/>
        <property type="gene ID" value="LAX5112_04798"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00074">
        <property type="reaction ID" value="UER00170"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008864">
        <property type="term" value="F:formyltetrahydrofolate deformylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016742">
        <property type="term" value="F:hydroxymethyl-, formyl- and related transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006189">
        <property type="term" value="P:'de novo' IMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006730">
        <property type="term" value="P:one-carbon metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd04875">
        <property type="entry name" value="ACT_F4HF-DF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd08648">
        <property type="entry name" value="FMT_core_Formyl-FH4-Hydrolase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01927">
        <property type="entry name" value="PurU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045865">
        <property type="entry name" value="ACT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002912">
        <property type="entry name" value="ACT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041729">
        <property type="entry name" value="Formyl-FH4-Hydrolase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002376">
        <property type="entry name" value="Formyl_transf_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036477">
        <property type="entry name" value="Formyl_transf_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004810">
        <property type="entry name" value="PurU"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044074">
        <property type="entry name" value="PurU_ACT"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42706">
        <property type="entry name" value="PTHR42706"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01842">
        <property type="entry name" value="ACT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00551">
        <property type="entry name" value="Formyl_trans_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01575">
        <property type="entry name" value="FFH4HYDRLASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53328">
        <property type="entry name" value="SSF53328"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55021">
        <property type="entry name" value="SSF55021"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00655">
        <property type="entry name" value="PurU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51671">
        <property type="entry name" value="ACT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1 3" id="KW-0554">One-carbon metabolism</keyword>
    <keyword evidence="3" id="KW-0658">Purine biosynthesis</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ACT" evidence="4">
        <location>
            <begin position="7"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="active site" evidence="3">
        <location>
            <position position="228"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022563"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51671"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ77088.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="285" mass="31759" checksum="06BD6526CAE7E717" modified="2015-12-09" version="1">MAEHHYVLTLSCADKPGIVAAVTTELADFGANIAESDQFWDRATNQFFLRIAMLAPEGVTLESVQKALDPVIARFDMKAKLVDTAKRPKVIIMVSKFDHAMLHLLYQIRVGWLDAEVVAIVSNHPDSARTADHEGIPYHHWPVTKGNKAEQEDKVLKLVKETGADLVVLARYMQVLSDNLSKRLFGKVINIHHSFLPSFKGAKPYHQAHARGVKMIGATGHYVTPDLDEGPIIEQDAERVSHALSADDFVARGRDIESRVLARAVKYHLENRVMIVGNKTIVFTP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQ03</accession>
    <name>A0A0M7AQ03_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6 7">L-carnitine dehydrogenase</fullName>
            <shortName evidence="7">CDH</shortName>
            <shortName evidence="7">L-CDH</shortName>
            <ecNumber evidence="5 7">1.1.1.108</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">lcdH_2</name>
        <name evidence="7" type="synonym">lcdH</name>
        <name evidence="10" type="ORF">LAX5112_04324</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Catalyzes the NAD(+)-dependent oxidation of L-carnitine to 3-dehydrocarnitine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>carnitine + NAD(+) = 3-dehydrocarnitine + H(+) + NADH</text>
            <dbReference type="Rhea" id="RHEA:19265"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17126"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57885"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="EC" id="1.1.1.108"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3 7">Amine and polyamine metabolism; carnitine metabolism.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4 7">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the 3-hydroxyacyl-CoA dehydrogenase family. L-carnitine dehydrogenase subfamily.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.108" evidence="5 7"/>
    <dbReference type="EMBL" id="CXWD01000022">
        <property type="protein sequence ID" value="CTQ75674.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673546.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000022.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04324"/>
    <dbReference type="EnsemblBacteria" id="CTQ75674">
        <property type="protein sequence ID" value="CTQ75674"/>
        <property type="gene ID" value="LAX5112_04324"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00117"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047728">
        <property type="term" value="F:carnitine 3-dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070403">
        <property type="term" value="F:NAD+ binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042413">
        <property type="term" value="P:carnitine catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006631">
        <property type="term" value="P:fatty acid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1040.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02129">
        <property type="entry name" value="L_carnitine_dehydrog"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006176">
        <property type="entry name" value="3-OHacyl-CoA_DH_NAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006108">
        <property type="entry name" value="3HC_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008927">
        <property type="entry name" value="6-PGluconate_DH-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013328">
        <property type="entry name" value="6PGD_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029069">
        <property type="entry name" value="HotDog_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026578">
        <property type="entry name" value="L-carnitine_dehydrogenase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00725">
        <property type="entry name" value="3HCDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02737">
        <property type="entry name" value="3HCDH_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48179">
        <property type="entry name" value="SSF48179"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54637">
        <property type="entry name" value="SSF54637"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7" id="KW-0520">NAD</keyword>
    <keyword evidence="7 10" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="3HCDH_N" evidence="9">
        <location>
            <begin position="2"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="domain" description="3HCDH" evidence="8">
        <location>
            <begin position="176"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="7"/>
            <end position="12"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001215"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004855"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012956"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00021240"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02129"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00725"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF02737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ75674.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="472" mass="51587" checksum="47947A4375F966BE" modified="2015-12-09" version="1">MKAAIIGGGVIGGGWAARFLLNGWDVAVFDPDPEAERKIGEVIANARRSLPALYDTALPAEGNLSFHSEMADAVQNANWIQESIPERLDLKHRILGDLSELAPETAVIGSSTSGFKPSELNEKGARAIVAHPFNPVYLLPLIELVGDAGACENAAPVLRSIGMFPLMVRKEIDAHIADRFLEAVWREALWLVKDGIATTEEIDEAIRMGFGIRWAQMGLFETYRVAGGEAGMKHFMAQFGPALKWPWTKLMDVPEFTDELVDLIAGQSDAQSGHMSIRELERLRDDNLVGMMRALKKTGSGAGGVIQRHEADLPKPEAPDLPITGDRKIPVSWTDYNGHMNETHYLEAGSLATDRFMELIGADANYIASGKSYFTIETHVRYLSELHAGNRLTIRTQVLKGEGKKLHLFHFLYGPDDTLAATVETLLLHVDLTTRASSLPDQAVAEKLGAYHQAHAALEQPEGAGRSVGQKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQ17</accession>
    <name>A0A0M7AQ17_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">HTH-type transcriptional regulator McbR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">mcbR_3</name>
        <name evidence="5" type="ORF">LAX5112_04615</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000027">
        <property type="protein sequence ID" value="CTQ76506.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673802.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000027.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04615"/>
    <dbReference type="EnsemblBacteria" id="CTQ76506">
        <property type="protein sequence ID" value="CTQ76506"/>
        <property type="gene ID" value="LAX5112_04615"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07377">
        <property type="entry name" value="WHTH_GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.530">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011711">
        <property type="entry name" value="GntR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008920">
        <property type="entry name" value="TF_FadR/GntR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000524">
        <property type="entry name" value="Tscrpt_reg_HTH_GntR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07729">
        <property type="entry name" value="FCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00392">
        <property type="entry name" value="GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00035">
        <property type="entry name" value="HTHGNTR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00895">
        <property type="entry name" value="FCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00345">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48008">
        <property type="entry name" value="SSF48008"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50949">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH gntR-type" evidence="4">
        <location>
            <begin position="14"/>
            <end position="81"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ76506.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="221" mass="24115" checksum="CCB4EF5C88F51719" modified="2015-12-09" version="1">MQTGSTNAENRQSVSAVQRIERGLLEEIGAGELAPGQRLDEAGLASRFGASRTPVREALSRLTAQGVLVQGEKRGVFVAEYSREQLSQMFEAMHEIEAACARIVAQRLDFLSRSEIEAAQADCVKAAEAGDRTAYLRANEAFHQAIYKATGNPYMAEIASEFRQRTGPFRAKKFAGREDLLSSAQSHQALLDSIFSKDAAAASKSMRDHMAVSFLETLKAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQJ3</accession>
    <name>A0A0M7AQJ3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Inner membrane protein YiaV</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yiaV_5</name>
        <name evidence="3" type="ORF">LAX5112_04673</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000028">
        <property type="protein sequence ID" value="CTQ76686.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673856.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000028.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04673"/>
    <dbReference type="EnsemblBacteria" id="CTQ76686">
        <property type="protein sequence ID" value="CTQ76686"/>
        <property type="gene ID" value="LAX5112_04673"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039562">
        <property type="entry name" value="MFP_biotin_lipoyl_2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13533">
        <property type="entry name" value="Biotin_lipoyl_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Biotin_lipoyl_2" evidence="2">
        <location>
            <begin position="74"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="107"/>
            <end position="231"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13533"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ76686.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="410" mass="45231" checksum="216D490605BE5E52" modified="2015-12-09" version="1">MLEFLLCSVFTILPDYLYRRYVQGKRWGKELTTFSIWYELRLGITTCLILTVGLLTAIFYYHPTTTNVTSFFRTVTILPEKSGRVVEVLVENNQHVDEGDVLFRLDSQLQKVAVEEAQRKLAELEAQISVSAEDLAAAEGLVQTAAGQLEEIRDQLARKRVISERNSTVVSEAEIERLENLLASRQGKLAAAMSNMRAVKARIEILLPAQLASAEVSLERSEVELDKTNIRAGISGIVEQFALQPGDFVSGVLRPAGILVPDGSGVEEFQAGFNQITAQVIKPDMLAEITCFSKPFAIIPMRVKEVQNVLASGQFRPTDQLVDPQDRPRPGTLTVIMEPLYPGQAKDIPPGSKCIANAYTNNHDLIASGELGTGEFLFYHAVDAVGIVHALILRIQALMFPIQTLVLTGH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQS1</accession>
    <name>A0A0M7AQS1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Cupin_2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04484</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ76143.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673681.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000024.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04484"/>
    <dbReference type="EnsemblBacteria" id="CTQ76143">
        <property type="protein sequence ID" value="CTQ76143"/>
        <property type="gene ID" value="LAX5112_04484"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013096">
        <property type="entry name" value="Cupin_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07883">
        <property type="entry name" value="Cupin_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cupin_2" evidence="1">
        <location>
            <begin position="45"/>
            <end position="108"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76143.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="153" mass="16776" checksum="01F50D394BA5A35C" modified="2015-12-09" version="1">MAYSFLHSTSGDPELKVPEIGLGLKVRMEPSMSNGAMTIIETENAPGFGPPLHRHKETEIFRVLEGRYLYEMDGHRFYAEEGDLVTIPGGAIHAFRNETDKPARQLIIICPGLDATGFFSGLADVMKGGHADTAALNVFSKKWDIEFLGPPIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARK0</accession>
    <name>A0A0M7ARK0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04939</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000036">
        <property type="protein sequence ID" value="CTQ77529.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008197043.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000036.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04939"/>
    <dbReference type="EnsemblBacteria" id="CTQ77529">
        <property type="protein sequence ID" value="CTQ77529"/>
        <property type="gene ID" value="LAX5112_04939"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011223">
        <property type="entry name" value="UCP028770"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11742">
        <property type="entry name" value="DUF3302"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="46"/>
            <end position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77529.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="80" mass="8748" checksum="54A22064F76D4209" modified="2015-12-09" version="1">MIFALIVLLVLLATLIGGWLFLAVWPGKIAKRRGHRRAEAVTMCGYWGALTLGLLMPIAFIWAYTDGEEPSRNSGAEGDT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARV5</accession>
    <name>A0A0M7ARV5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04892</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000034">
        <property type="protein sequence ID" value="CTQ77387.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674036.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000034.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77387">
        <property type="protein sequence ID" value="CTQ77387"/>
        <property type="gene ID" value="LAX5112_04892"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ77387.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="179" mass="20794" checksum="361B98AABDDCE855" modified="2015-12-09" version="1">MKAHTMNITFADDICKFHLDQMANLEMTKLPQSKVHFERTRDYFASKHYHELNEDEALWVSSSALLNPRYAASLINSNIGPASNIWPTMNEITQEMYEELFELIRQARRDSFNKVISDTVFKRSLSTWKAATIEAFIESRGAYRIRSKAQADAYMSSRNTCHQLKAFNYDIKHARFLAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AS50</accession>
    <name>A0A0M7AS50_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">L-cystine-binding protein TcyA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">tcyA_4</name>
        <name evidence="3" type="ORF">LAX5112_04795</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000031">
        <property type="protein sequence ID" value="CTQ77080.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673957.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000031.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04795"/>
    <dbReference type="EnsemblBacteria" id="CTQ77080">
        <property type="protein sequence ID" value="CTQ77080"/>
        <property type="gene ID" value="LAX5112_04795"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00062">
        <property type="entry name" value="PBPb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="domain" description="PBPb" evidence="2">
        <location>
            <begin position="30"/>
            <end position="248"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00062"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ77080.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="248" mass="27823" checksum="65BECEA93EBE6352" modified="2015-12-09" version="1">MAIRSWFWVALLVVGILPIGLPTLGHPAGSVIILATDYPPFDIAEPEDDRLGFDHEVAVEAFKRKGITAEVVYVPWSRAVSETEAGNYPGLLTCAHTVERAEHFLFSAPISQEAYGVFYRTGHPVENIRSIADLAGQRVASVLEYAPNAEMERQGAELVNIATDTAGFKMLELGRVEFFHTGQAAGQYLKRKLGYRNEFGFRSFVVWDYFLCFSRKHADSEELRQVFNKGLAELRADGTYDSIHARYR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AS53</accession>
    <name>A0A0M7AS53_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_05032</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000044">
        <property type="protein sequence ID" value="CTQ77729.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77729">
        <property type="protein sequence ID" value="CTQ77729"/>
        <property type="gene ID" value="LAX5112_05032"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="65"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="65"/>
            <end position="90"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77729.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="106" mass="11875" checksum="6A7E3E09C162F509" modified="2015-12-09" version="1">MDADFRVFRGFIGAVDAGEVLDLACFRLGIKPFRIALLALLDRRVDKDFNELALAHQIPCHLPLRPERRDEGAKHDQTRIGHKPGHFRHPADVLHPVGVGKAEIPV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASR9</accession>
    <name>A0A0M7ASR9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcriptional regulator EutR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04950</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000036">
        <property type="protein sequence ID" value="CTQ77551.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04950"/>
    <dbReference type="EnsemblBacteria" id="CTQ77551">
        <property type="protein sequence ID" value="CTQ77551"/>
        <property type="gene ID" value="LAX5112_04950"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="1">
        <location>
            <begin position="233"/>
            <end position="334"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77551.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="340" mass="38128" checksum="82074A535ECD9593" modified="2015-12-09" version="1">MNTTYFMVQSTMIEIAKQKGALLTPTAFQAALIAEFGDVDQLCQEVRYWDLQFQPLTVMPEKRRVAYLVQGTCGHFELSYARFRQNLDQRGAPPAGKLTFTIPGPTLRSLWWCGKETASNDVLVYYPGNEWRSISDKDFEVYLISIPLADFASYSARCGMPDADPRLLQTVFMAPQSLLAQAQTVLFPLLMPAPYFDTLKLDGLVEDLIGCWLAQTGLKPRKAEPHKSKLAISKILEKIDAGETHHLNIPELCAGMGLSRRALEIAFKEKFGVGPAAFVKSWKMAQSRRLLMQADPQKISVADVMAEHGFVHVGQFATDYKRWFQELPSETLSRSPIGSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AST8</accession>
    <name>A0A0M7AST8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Transcriptional regulatory protein TdiR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">tdiR_2</name>
        <name evidence="5" type="ORF">LAX5112_04936</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000036">
        <property type="protein sequence ID" value="CTQ77522.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674079.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000036.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04936"/>
    <dbReference type="EnsemblBacteria" id="CTQ77522">
        <property type="protein sequence ID" value="CTQ77522"/>
        <property type="gene ID" value="LAX5112_04936"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06170">
        <property type="entry name" value="LuxR_C_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000792">
        <property type="entry name" value="Tscrpt_reg_LuxR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00196">
        <property type="entry name" value="GerE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00038">
        <property type="entry name" value="HTHLUXR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00421">
        <property type="entry name" value="HTH_LUXR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00622">
        <property type="entry name" value="HTH_LUXR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50043">
        <property type="entry name" value="HTH_LUXR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="4">
        <location>
            <begin position="3"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="domain" description="HTH luxR-type" evidence="3">
        <location>
            <begin position="134"/>
            <end position="199"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="2">
        <location>
            <position position="52"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ77522.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="200" mass="21986" checksum="95D87536B279E871" modified="2015-12-09" version="1">MYKVCIVDDDPSTCRALRRLLDAAGYQTTTHQSATEYLAAPATATPDCLLLDIHMPELDGLSLQTKLNETGDAPPIVFLTGRGDVPMSVQAMRAGAADFLLKPVDEDDLFAAIQRAVTERKKDLPPSNADEEKLRAHLALLTPREDEVLDVMLTGALNKEIAAKLGIAERTVKMHRARLMRKLDAKTLLDLAPYIPLKQN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AT36</accession>
    <name>A0A0M7AT36_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_05007</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000039">
        <property type="protein sequence ID" value="CTQ77671.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77671">
        <property type="protein sequence ID" value="CTQ77671"/>
        <property type="gene ID" value="LAX5112_05007"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ77671.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="39" mass="4465" checksum="61BED8482B0F2F3E" modified="2015-12-09" version="1">MIVFGVCFSKSIQDSKRSNFSVRNDDKYILPLAVQWNGT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZLH1</accession>
    <name>A0A0M6ZLH1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Transcriptional repressor DicA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_00003</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63615.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008193334.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00003"/>
    <dbReference type="EnsemblBacteria" id="CTQ63615">
        <property type="protein sequence ID" value="CTQ63615"/>
        <property type="gene ID" value="LAX5112_00003"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01381">
        <property type="entry name" value="HTH_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00530">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="2">
        <location>
            <begin position="47"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="109"/>
            <end position="143"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ63615.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="147" mass="15816" checksum="CCEFB88DF6652ACD" modified="2015-12-09" version="1">MTNLKKIEVPQEDDQTVYPAIGAPVDSGANYMSNSSSDYTLGERICKARDIAGLSTAQLARRLGIKTSTLQSWESDRSEPRSNKLILLAGILNVSPTWLLVGRGSPPVAEDTSADLDSMRVALDRIQKQAQALADEIATLQSRLGGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZMF8</accession>
    <name>A0A0M6ZMF8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00123</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63948.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008196895.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ63948">
        <property type="protein sequence ID" value="CTQ63948"/>
        <property type="gene ID" value="LAX5112_00123"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005808974" evidence="1">
        <location>
            <begin position="25"/>
            <end position="198"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ63948.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="198" mass="21394" checksum="C4FA12208DE16DB4" modified="2015-12-09" version="1">MQRNTKAGAFALGLILAFAGSAAASPLPQETITLPEDSLEVTVASASLDQKDPLESELTIWVGEVHLNGRDVVWVELIDSYGEVIYDSEVSTNETHLLPDGRAVVVNALDPQTMVAEKDESRIVTEGALVVTRRVINDGGNAAAVELIETSDEPVRKGTMLEIADFGQTVWERVVAFFNAATSQVKVAWTWLVDTLQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZN07</accession>
    <name>A0A0M6ZN07_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Fructose-1,6-bisphosphatase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">glpX</name>
        <name evidence="6" type="ORF">LAX5112_00048</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>beta-D-fructose 1,6-bisphosphate + H2O = beta-D-fructose 6-phosphate + phosphate</text>
            <dbReference type="Rhea" id="RHEA:11064"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:32966"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57634"/>
            <dbReference type="EC" id="3.1.3.11"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="4">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 3">Belongs to the FBPase class 2 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63737.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040452098.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00048"/>
    <dbReference type="EnsemblBacteria" id="CTQ63737">
        <property type="protein sequence ID" value="CTQ63737"/>
        <property type="gene ID" value="LAX5112_00048"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042132">
        <property type="term" value="F:fructose 1,6-bisphosphate 1-phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006094">
        <property type="term" value="P:gluconeogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006071">
        <property type="term" value="P:glycerol metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01516">
        <property type="entry name" value="FBPase_glpX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004464">
        <property type="entry name" value="FBPase_class-2/SBPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30447">
        <property type="entry name" value="PTHR30447"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03320">
        <property type="entry name" value="FBPase_glpX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004532">
        <property type="entry name" value="GlpX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00330">
        <property type="entry name" value="glpX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0464">Manganese</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Substrate binding" evidence="5">
        <location>
            <begin position="99"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="5">
        <location>
            <begin position="176"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="5">
        <location>
            <begin position="198"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="44"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="68"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="96"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="99"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="130"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="223"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="226"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
            <label>2</label>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001273"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRNR" id="PIRNR004532"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR004532-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR004532-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ63737.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="331" mass="35308" checksum="14E37F23E44EA603" modified="2015-12-09" version="1">MSNTEHQPASGLDRILTLELARVAERAAVSAARLRGHGDEMAADQAAVDAMRRELNRLPIDGTVVIGEGERDEAPMLYIGENVGTKQGPKVDIALDPLEGTTICAKNLPNSLAVIALAPEGDLLNAPDSYMDKIAIGPGYSDGLIDLDAPIADNLAAVAKEKGVKIEEVTACVLDRPRHARLIEEIRATGAAIRLIGDGDVAGVIHTTDAEETGIDLYAGIGGAPEGVLAAAALRCIGGQMQSRLVITRDEQVERAHRMGIDDIKKKYTLEEMAGPDVLFAATGVTDGNMLQGVRFGRNHITTHTVVMRSSTGTVRYIKAQHTQLEKFHLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPF6</accession>
    <name>A0A0M6ZPF6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_00186</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64121.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040450537.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00186"/>
    <dbReference type="EnsemblBacteria" id="CTQ64121">
        <property type="protein sequence ID" value="CTQ64121"/>
        <property type="gene ID" value="LAX5112_00186"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="6"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="136"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="74"/>
            <end position="104"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ64121.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="187" mass="20596" checksum="C59F19D8F727859A" modified="2015-12-09" version="1">MISAIVDGVLLLALVVTTIRMLQMHKDLRRLGSYHEDYQRIFDQTALALDGIEVSIQEINVKGAQILNALGNRMDDARELIAEIDALTREAKRQQSVLKAELKELSSSHALLQKANRFTPVREDLDLFNDETAAQPSPVSAVASSPQDGPVIHRGTSGPKAPARVHKIDNTLGSPFRSVSMNQKDTF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQ02</accession>
    <name>A0A0M6ZQ02_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Ribosome association toxin RatA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">pasT</name>
        <name evidence="3" type="ORF">LAX5112_00234</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ribosome association toxin RatA family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64256.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008191939.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00234"/>
    <dbReference type="EnsemblBacteria" id="CTQ64256">
        <property type="protein sequence ID" value="CTQ64256"/>
        <property type="gene ID" value="LAX5112_00234"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048039">
        <property type="term" value="F:ubiquinone binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045333">
        <property type="term" value="P:cellular respiration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006744">
        <property type="term" value="P:ubiquinone biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07813">
        <property type="entry name" value="COQ10p_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.530.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044996">
        <property type="entry name" value="COQ10-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005031">
        <property type="entry name" value="COQ10_START"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023393">
        <property type="entry name" value="START-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12901">
        <property type="entry name" value="PTHR12901"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03364">
        <property type="entry name" value="Polyketide_cyc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Polyketide_cyc" evidence="2">
        <location>
            <begin position="10"/>
            <end position="141"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF03364"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ64256.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="150" mass="17270" checksum="5799D4DA6DD01F2A" modified="2015-12-09" version="1">MPSFSSSHKVNHKADDMFRLVADVEQYPKFVPLCQALQVRGRKELPDGRTVLVADMTVAYKMFKETFTSRVELQPESKTILVEYLDGPFKHLENKWTFKDVDDGRSTVGFYINYEFRSRALGSLMGAMFDKAFRKFSNAFETRADQVYGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQ54</accession>
    <name>A0A0M6ZQ54_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00277</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64382.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ64382">
        <property type="protein sequence ID" value="CTQ64382"/>
        <property type="gene ID" value="LAX5112_00277"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809017" evidence="1">
        <location>
            <begin position="23"/>
            <end position="115"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64382.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="115" mass="12658" checksum="921F06108853A474" modified="2015-12-09" version="1">MMIRSLLIALLLLVSLPQTATANTLTAREVQNEMLNKTIVTHRFGMRVTMRYLPGGVVSAKALLGSVDGTWRARGNQICSTFPRGPAKGTSCVSFKRNGDKRYISSEGVRFRVVD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQ57</accession>
    <name>A0A0M6ZQ57_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00012</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63634.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ63634">
        <property type="protein sequence ID" value="CTQ63634"/>
        <property type="gene ID" value="LAX5112_00012"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ63634.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="240" mass="27972" checksum="FEA04855800D2E1C" modified="2015-12-09" version="1">MHQSSSGPRADQVRCHALFTYIFMLATSALATLGPPDAAFSRNLSPKFPAAYYAEQGNKYFDTLDSYASRASKPNYSTHVIRWEWPPWLYLTGHKDHWMTMDRLLVLYPTRVLNRDCRSFKVQPFSRCRVTFHYEWIDSYVDIYQEFTFNDYGQITFIEAWTDEAGFLPMNATNDRWAEGTAVRRLSTRVPGLGRADGRYQAIPPQHLARVDRDLRNLQIRLRVPVIAWLVESVRFTFNA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQ61</accession>
    <name>A0A0M6ZQ61_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Anhydro-N-acetylmuramic acid kinase</fullName>
            <ecNumber evidence="2">2.7.1.170</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="2">AnhMurNAc kinase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="2 3" type="primary">anmK</name>
        <name evidence="3" type="ORF">LAX5112_00430</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Catalyzes the specific phosphorylation of 1,6-anhydro-N-acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>1,6-anhydro-N-acetyl-beta-muramate + ATP + H2O = ADP + H(+) + N-acetyl-D-muramate 6-phosphate</text>
            <dbReference type="Rhea" id="RHEA:24952"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:58690"/>
            <dbReference type="ChEBI" id="CHEBI:58722"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.1.170"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Amino-sugar metabolism; 1,6-anhydro-N-acetylmuramate degradation.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2">Cell wall biogenesis; peptidoglycan recycling.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the anhydro-N-acetylmuramic acid kinase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.170" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64868.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670393.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00430"/>
    <dbReference type="EnsemblBacteria" id="CTQ64868">
        <property type="protein sequence ID" value="CTQ64868"/>
        <property type="gene ID" value="LAX5112_00430"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00343"/>
    <dbReference type="UniPathway" id="UPA00544"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016773">
        <property type="term" value="F:phosphotransferase activity, alcohol group as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0097175">
        <property type="term" value="P:1,6-anhydro-N-acetyl-beta-muramic acid catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006040">
        <property type="term" value="P:amino sugar metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009254">
        <property type="term" value="P:peptidoglycan turnover"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01270">
        <property type="entry name" value="AnhMurNAc_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005338">
        <property type="entry name" value="Anhydro_N_Ac-Mur_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30605">
        <property type="entry name" value="PTHR30605"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03702">
        <property type="entry name" value="AnmK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="SSF53067"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 2" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="2 3" id="KW-0418">Kinase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0808">Transferase</keyword>
    <feature type="binding site" evidence="2">
        <location>
            <begin position="12"/>
            <end position="19"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01270"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ64868.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="361" mass="37900" checksum="AAD5C72F99FCF49C" modified="2015-12-09" version="1">MTVWSIVGTISGTSADGIDLAEIKTDGREVSAFGAAETVSYRPETRTRVLEAAAKKGTDREAWPNLARAVTEDHAEAVGAFLGKHALVPDAVVFHGQTVWHDPDAGETVQLGDPQLLADILKLRVIGDVRLADMAAGGQGAPLVPVYHQALARSLVGGGQEPICFLNIGGVSNLTFIDGDTLHAFDIGPGNALLDDWIRRHEAGDYDAGGEISANGKVAEDRLSDALSHPFLSEAGPKSLDRYSFSGGFVEGLSLEDGAATLLAFTVGAISKAETLLPKRVKSWLICGGGRHNPVLLRRLQEELSGDVVSADVYDIDGDALEAQAMAFLGARLLAGLPTTFPETTGANGPVIGGRLYQPGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQ95</accession>
    <name>A0A0M6ZQ95_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Neu5Ac permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">siaT_2</name>
        <name evidence="3" type="ORF">LAX5112_00291</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64422.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670268.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00291"/>
    <dbReference type="EnsemblBacteria" id="CTQ64422">
        <property type="protein sequence ID" value="CTQ64422"/>
        <property type="gene ID" value="LAX5112_00291"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010656">
        <property type="entry name" value="DctM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011853">
        <property type="entry name" value="TRAP_DctM-Dct_fused"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06808">
        <property type="entry name" value="DctM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02123">
        <property type="entry name" value="TRAP_fused"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="36"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="78"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="111"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="155"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="188"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="214"/>
            <end position="233"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="240"/>
            <end position="258"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="286"/>
            <end position="308"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="411"/>
            <end position="432"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="453"/>
            <end position="471"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="517"/>
            <end position="538"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="550"/>
            <end position="568"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="575"/>
            <end position="595"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="601"/>
            <end position="622"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="634"/>
            <end position="652"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="672"/>
            <end position="696"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="703"/>
            <end position="728"/>
        </location>
    </feature>
    <feature type="domain" description="DctM" evidence="2">
        <location>
            <begin position="231"/>
            <end position="658"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF06808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ64422.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="746" mass="78596" checksum="CB5CA886A72225D3" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQU9</accession>
    <name>A0A0M6ZQU9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00341</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64622.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00341"/>
    <dbReference type="EnsemblBacteria" id="CTQ64622">
        <property type="protein sequence ID" value="CTQ64622"/>
        <property type="gene ID" value="LAX5112_00341"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009506">
        <property type="entry name" value="DUF1127"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06568">
        <property type="entry name" value="DUF1127"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="83"/>
            <end position="108"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64622.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="108" mass="11631" checksum="952609BDCD7D0881" modified="2015-12-09" version="1">MSHIAHHPIFALSGQLVARALRVFKNRHQMGKLSELSDAALKDIGLTRSDVRRAIALPVHTDPVPFLTQMANGHSIAALQPMPRAANEGPKAPSLTIIPAHPRPEIAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQV6</accession>
    <name>A0A0M6ZQV6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Heat shock protein HspQ</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">hspQ</name>
        <name evidence="2" type="ORF">LAX5112_00316</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64490.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040450434.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00316"/>
    <dbReference type="EnsemblBacteria" id="CTQ64490">
        <property type="protein sequence ID" value="CTQ64490"/>
        <property type="gene ID" value="LAX5112_00316"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.390">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011722">
        <property type="entry name" value="Hemimethylated_DNA-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036623">
        <property type="entry name" value="Hemimethylated_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08755">
        <property type="entry name" value="YccV-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00992">
        <property type="entry name" value="YccV-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141255">
        <property type="entry name" value="SSF141255"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02097">
        <property type="entry name" value="yccV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0346">Stress response</keyword>
    <feature type="domain" description="YccV-like" evidence="1">
        <location>
            <begin position="3"/>
            <end position="102"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64490.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="107" mass="12624" checksum="7694BA80AF15C21B" modified="2015-12-09" version="1">MRTAKFKIGQVVRHRVYPFRGVIFDVDPTFSNTEEWWDAIPEDVRPKRDQPFYHLLAENDETEYVAYVSEQNLVPDMTGEPVRHPQVAEIFEEQSDGSYLPRVVEMH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRU1</accession>
    <name>A0A0M6ZRU1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Multiple resistance and pH homeostasis protein E</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">mrpE_1</name>
        <name evidence="8" type="ORF">LAX5112_00469</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the CPA3 antiporters (TC 2.A.63) subunit E family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64982.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00469"/>
    <dbReference type="EnsemblBacteria" id="CTQ64982">
        <property type="protein sequence ID" value="CTQ64982"/>
        <property type="gene ID" value="LAX5112_00469"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008324">
        <property type="term" value="F:cation transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002758">
        <property type="entry name" value="Cation_antiport_E"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34584">
        <property type="entry name" value="PTHR34584"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01899">
        <property type="entry name" value="MNHE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF019239">
        <property type="entry name" value="MrpE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6" id="KW-1133">Transmembrane helix</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006228"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ64982.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="126" mass="13527" checksum="20CC1E2AB0534814" modified="2015-12-09" version="1">MISLVKRLGAFGLLCGVFIIELVKASVDVTVAVLSNKQKLKPAIVAVPLDLRTDMGITTLANIVSLTPGTTSLHISDDRKTLYVHVLDRESDEDVIRSIKDTFETRVRAVEGPAPSETVAKKGAVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRY8</accession>
    <name>A0A0M6ZRY8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">TVP38/TMEM64 family membrane protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">ydjZ</name>
        <name evidence="4" type="ORF">LAX5112_00509</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the TVP38/TMEM64 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65097.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00509"/>
    <dbReference type="EnsemblBacteria" id="CTQ65097">
        <property type="protein sequence ID" value="CTQ65097"/>
        <property type="gene ID" value="LAX5112_00509"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032816">
        <property type="entry name" value="SNARE_assoc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015414">
        <property type="entry name" value="TMEM64"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12677">
        <property type="entry name" value="PTHR12677"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09335">
        <property type="entry name" value="SNARE_assoc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="34"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="72"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="107"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="160"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="192"/>
            <end position="210"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="246"/>
            <end position="263"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU366058"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ65097.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="269" mass="28510" checksum="BA86605473C84DFD" modified="2015-12-09" version="1">MRGNEAEAMNASDENDKKENSVPGRSFSAIAKKWAPLVVLLSLMALAFSQGLHKHLTLSTLIMERQQLITFVDANLAVAVLSYIALYAATVALSFPGASLFTIAGGFLFGWVIGGLATVFGATLGAAAVFLIARSSVGDVLTRRAGPFLTRLSEGFRQDAFNYLLFLRLTPIFPFWLVNIAPAVFQMPLPSYALATFVGIIPGTFAFAFIGSGLDSVIAAQEAANPGCASAGTCSVEISALVTPQLIAAFFALGIASLIPVVLKRLRFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSL8</accession>
    <name>A0A0M6ZSL8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Acetylpolyamine aminohydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">aphA_2</name>
        <name evidence="3" type="ORF">LAX5112_00552</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the histone deacetylase family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65221.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670490.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00552"/>
    <dbReference type="EnsemblBacteria" id="CTQ65221">
        <property type="protein sequence ID" value="CTQ65221"/>
        <property type="gene ID" value="LAX5112_00552"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.800.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000286">
        <property type="entry name" value="His_deacetylse"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023801">
        <property type="entry name" value="His_deacetylse_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037138">
        <property type="entry name" value="His_deacetylse_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023696">
        <property type="entry name" value="Ureohydrolase_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00850">
        <property type="entry name" value="Hist_deacetyl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01270">
        <property type="entry name" value="HDASUPER"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52768">
        <property type="entry name" value="SSF52768"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Hist_deacetyl" evidence="2">
        <location>
            <begin position="28"/>
            <end position="338"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ65221.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="342" mass="37948" checksum="B468FA22D1EF27BE" modified="2015-12-09" version="1">MKTVFSATQLAHAPAQEISDGKLQPAVEIPSRAEIVLATVKDRKVGDVIPPLEFPIRPLHRVHSEEYVSFLERFWPLWTASGRDAEAFPFVWPIRSLRQDTKVEHIDGLLGRYSMDAGTPLGEHTYRAARASADTALTAAKLVLDGEKSVFALCRPPGHHAGHDFFGGYCFFNNAAVAAQYLRDYGLHRVAILDVDYHHGNGTQALFYDRPDVLFLSLHADPKDEYPYFLGYADETGEHAGTGFTRNWPLPLGTDWAAYSPALDEACRWLLVYKPEAMIVSLGLDCFERDPISGFKFKSEDFVRLGQRLARVGVPTIFILEGGYAVDALGTNCVNVLEGFSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSY0</accession>
    <name>A0A0M6ZSY0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Flp pilus assembly protein, pilin Flp</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00544</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65200.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670484.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00544"/>
    <dbReference type="EnsemblBacteria" id="CTQ65200">
        <property type="protein sequence ID" value="CTQ65200"/>
        <property type="gene ID" value="LAX5112_00544"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007047">
        <property type="entry name" value="Flp_Fap"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04964">
        <property type="entry name" value="Flp_Fap"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="38"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65200.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="58" mass="5982" checksum="755AE49EEAB8E3C0" modified="2015-12-09" version="1">MKTLFSRFAKDESGATAIEYGLIAGLLSVAIIGILVTMGDSLTSIFSQIDTALKTGSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZT57</accession>
    <name>A0A0M6ZT57_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">3-oxoacyl-[acyl-carrier-protein] reductase FabG</fullName>
            <ecNumber evidence="1">1.1.1.100</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">fabG_2</name>
        <name evidence="1" type="ORF">LAX5112_00654</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.1.1.100" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65497.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670604.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00654"/>
    <dbReference type="EnsemblBacteria" id="CTQ65497">
        <property type="protein sequence ID" value="CTQ65497"/>
        <property type="gene ID" value="LAX5112_00654"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004316">
        <property type="term" value="F:3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ65497.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="257" mass="26433" checksum="3DC6B20F925A2398" modified="2015-12-09" version="1">MDLGIKGKRALVLGASRGLGAAIAKSLAAEGADVVAAARNADAITEWAKTTDGSVTAQKLDVSNAAEVDAVLDSLLESGNIDILVNNAGGPPPGSSTGPSRTDWMAHFETMVANLIHIANRCLPGMEEAGWGRIVTISSSGVEQPIPNLALSNGLRSALVGWSKTLSTEVASKGVTVNIAMPGRIHTARVDELDAAAAKRLGKSVEDVATQSAASIPAGRYGQPEEFADVVTFLCSERASYVTGSKIRIDGGSIRGI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUD5</accession>
    <name>A0A0M6ZUD5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">(R)-citramalate synthase</fullName>
            <ecNumber evidence="4">2.3.1.182</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">leuA_1</name>
        <name evidence="11" type="ORF">LAX5112_00939</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>acetyl-CoA + H2O + pyruvate = (3R)-citramalate + CoA + H(+)</text>
            <dbReference type="Rhea" id="RHEA:19045"/>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30934"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57288"/>
            <dbReference type="EC" id="2.3.1.182"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Amino-acid biosynthesis; L-isoleucine biosynthesis; 2-oxobutanoate from pyruvate: step 1/3.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 9">Belongs to the alpha-IPM synthase/homocitrate synthase family.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.182" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66358.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670863.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00939"/>
    <dbReference type="EnsemblBacteria" id="CTQ66358">
        <property type="protein sequence ID" value="CTQ66358"/>
        <property type="gene ID" value="LAX5112_00939"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00047">
        <property type="reaction ID" value="UER00066"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043714">
        <property type="term" value="F:(R)-citramalate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003852">
        <property type="term" value="F:2-isopropylmalate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009097">
        <property type="term" value="P:isoleucine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009098">
        <property type="term" value="P:leucine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013709">
        <property type="entry name" value="2-isopropylmalate_synth_dimer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002034">
        <property type="entry name" value="AIPM/Hcit_synth_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005675">
        <property type="entry name" value="Citramal_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036230">
        <property type="entry name" value="LeuA_allosteric_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000891">
        <property type="entry name" value="PYR_CT"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43538">
        <property type="entry name" value="PTHR43538"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00682">
        <property type="entry name" value="HMGL-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08502">
        <property type="entry name" value="LeuA_dimer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00917">
        <property type="entry name" value="LeuA_dimer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF110921">
        <property type="entry name" value="SSF110921"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00977">
        <property type="entry name" value="citramal_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00815">
        <property type="entry name" value="AIPM_HOMOCIT_SYNTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00816">
        <property type="entry name" value="AIPM_HOMOCIT_SYNTH_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50991">
        <property type="entry name" value="PYR_CT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="8" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="8" id="KW-0100">Branched-chain amino acid biosynthesis</keyword>
    <keyword evidence="6" id="KW-0412">Isoleucine biosynthesis</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 9 11" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Pyruvate carboxyltransferase" evidence="10">
        <location>
            <begin position="6"/>
            <end position="271"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004743"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006154"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012337"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022325"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022624"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU003523"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50991"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ66358.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="531" mass="57541" checksum="7D86E8C6D6986E95" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUT0</accession>
    <name>A0A0M6ZUT0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">5-methyltetrahydrofolate:corrinoid/iron-sulfur protein co-methyltransferase</fullName>
            <ecNumber evidence="3">2.1.1.258</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">acsE</name>
        <name evidence="3" type="ORF">LAX5112_00990</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.1.1.258" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66498.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008189177.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00990"/>
    <dbReference type="EnsemblBacteria" id="CTQ66498">
        <property type="protein sequence ID" value="CTQ66498"/>
        <property type="gene ID" value="LAX5112_00990"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102036">
        <property type="term" value="F:methyltetrahydrofolate:corrinoid/iron-sulfur protein methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042558">
        <property type="term" value="P:pteridine-containing compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011005">
        <property type="entry name" value="Dihydropteroate_synth-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000489">
        <property type="entry name" value="Pterin-binding_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00809">
        <property type="entry name" value="Pterin_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51717">
        <property type="entry name" value="SSF51717"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50972">
        <property type="entry name" value="PTERIN_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Pterin-binding" evidence="2">
        <location>
            <begin position="21"/>
            <end position="269"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="293"/>
            <end position="318"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50972"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ66498.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="318" mass="33566" checksum="0BDB66CEA15E00D0" modified="2015-12-09" version="1">MTRTIVASATKEVVIGFDQPFCVIGERINPTGRKKLAAEMVEGNFETVKADVLAQAAAGATMLDVNAGVTAVNPNETEPPLLVKTLEIVQELSDLPISIDSSVTEAIKAGLEVTKGRPLVNSVTGEEEKLEAILPLIKKYDVPVVAISNDETGISEDPDVRFEVAKKIVERAADYGIPAHDIVVDPLVMPIGAMGTAGQQVFALLRRLREELKVNTTCGLSNISFGLPHRHGINAGFIPMVIGAGMTSAIMNPCRPQEMEAVRAANVLNGTDPNCQEWIMTYRDHKPAAAAGAAAAAPAEGAASGGRRRGGRAARRAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZV82</accession>
    <name>A0A0M6ZV82_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">VWA domain containing CoxE-like protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00822</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65970.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670729.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00822"/>
    <dbReference type="EnsemblBacteria" id="CTQ65970">
        <property type="protein sequence ID" value="CTQ65970"/>
        <property type="gene ID" value="LAX5112_00822"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.410">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011195">
        <property type="entry name" value="UCP010256"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008912">
        <property type="entry name" value="Uncharacterised_CoxE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036465">
        <property type="entry name" value="vWFA_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05762">
        <property type="entry name" value="VWA_CoxE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF010256">
        <property type="entry name" value="CoxE_vWa"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53300">
        <property type="entry name" value="SSF53300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="113"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="123"/>
            <end position="146"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65970.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="399" mass="44497" checksum="EDFAA92EA3D610C2" modified="2015-12-09" version="1">MASVHLKSHDDLGAAVRVRLAGFVRSLRDSGYKVGLGETEDAIRLLRSDIIKRPQRLKEAFRALFSGRLSDWTKFDDVFDAYWLGRGVKSGIKVSGSSSRKTMKTIREMVDAQGPRQDTIAGDVDRVPGEEDEPSDETPSGRREGASIADHLGKTDFRNIHDPEQLAKAHELAEKLARAMRIRLTRRDKQKRKGPRLDLRKTIRHSIAQGGTPIELIRKGSRTRQLRLVILLDASGSMSNYTGVFTRFVHGLLDNFREAEAFLFHTRLVHVSSALSERDATRALDRMGLMAQGIGGGTKIGEALADFNRSHAARVIHSRTCVMILSDGYDTGTPDQLGDEMARLRKRCKRIIWLNPMIGWDGYEPVTGGMQAALPHVDLFAPAHNLDSLAALEPYLERL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVF7</accession>
    <name>A0A0M6ZVF7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Glutamyl-tRNA(Gln) amidotransferase subunit A</fullName>
            <ecNumber evidence="3">6.3.5.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">gatA_1</name>
        <name evidence="3" type="ORF">LAX5112_00660</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the amidase family.</text>
    </comment>
    <dbReference type="EC" id="6.3.5.-" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65514.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670610.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00660"/>
    <dbReference type="EnsemblBacteria" id="CTQ65514">
        <property type="protein sequence ID" value="CTQ65514"/>
        <property type="gene ID" value="LAX5112_00660"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016874">
        <property type="term" value="F:ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1300.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000120">
        <property type="entry name" value="Amidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023631">
        <property type="entry name" value="Amidase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036928">
        <property type="entry name" value="AS_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11895">
        <property type="entry name" value="PTHR11895"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01425">
        <property type="entry name" value="Amidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75304">
        <property type="entry name" value="SSF75304"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0436">Ligase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Amidase" evidence="2">
        <location>
            <begin position="28"/>
            <end position="450"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009199"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01425"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ65514.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="473" mass="51349" checksum="7D6EE5C34620F6D8" modified="2015-12-09" version="1">MAEKPVWQLSASELVAEIINGQITAEAATAATVDRMRTVNGHLNAVVDDMGDEALERARVLDAHMESSGPVGPLHGVPLTIKVNVDQKDKATTNGVKAFSEVIAPDDAAFVKTLTNAGAIVIGRTNTPEFSFRATTTNDLYGRTFSPWNDWASSGGSSGGASTAVMSGMGPIAHGNDIGGSLRFPSAATGAVTVKPGLGRTPAWNPSQSAERGLLAQLMSVQGVICREVRDVRLAMKSAVAYDPHDPWQVPVPFEGSVLDQPTRIGFTKNTYQFEAHPAVTKALDVARDCLVDAGYEVVEIETPDIGEIGETGYRALMGEINVLMLNDIRTYGSAEINRMFDEYFELFPPFAGEELLRQMARRSHFIRQWNLLLENYPIVLTPFLPSPTYAWNRDAEGKDGIMEVLGCGIWSFAMNYMGLPAGIVSPSMHDGLPVAVQMVGRRFREDMILDALEAVETRVGVMAQKLFDRKQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="32" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZW83</accession>
    <name>A0A0M6ZW83_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7 25">Na(+)-translocating NADH-quinone reductase subunit F</fullName>
            <shortName evidence="25">Na(+)-NQR subunit F</shortName>
            <shortName evidence="25">Na(+)-translocating NQR subunit F</shortName>
            <ecNumber evidence="6 25">7.2.1.1</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="24 25">NQR complex subunit F</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="23 25">NQR-1 subunit F</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="25 28" type="primary">nqrF</name>
        <name evidence="28" type="ORF">LAX5112_00737</name>
    </gene>
    <organism evidence="28 29">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="29" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="29">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3 25">NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. The first step is catalyzed by NqrF, which accepts electrons from NADH and reduces ubiquinone-1 to ubisemiquinone by a one-electron transfer pathway.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 25">
            <text>a ubiquinone + H(+) + n Na(+)(in) + NADH = a ubiquinol + n Na(+)(out) + NAD(+)</text>
            <dbReference type="Rhea" id="RHEA:47748"/>
            <dbReference type="Rhea" id="RHEA-COMP:9565"/>
            <dbReference type="Rhea" id="RHEA-COMP:9566"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16389"/>
            <dbReference type="ChEBI" id="CHEBI:17976"/>
            <dbReference type="ChEBI" id="CHEBI:29101"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="EC" id="7.2.1.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="25">
            <name>2Fe-2S cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49601"/>
        </cofactor>
        <text evidence="25">Binds 1 [2Fe-2S] cluster.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 25">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="5 25">Composed of six subunits; NqrA, NqrB, NqrC, NqrD, NqrE and NqrF.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="25">Cell membrane</location>
            <topology evidence="25">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 25">Belongs to the NqrF family.</text>
    </comment>
    <dbReference type="EC" id="7.2.1.1" evidence="6 25"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65733.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670667.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00737"/>
    <dbReference type="EnsemblBacteria" id="CTQ65733">
        <property type="protein sequence ID" value="CTQ65733"/>
        <property type="gene ID" value="LAX5112_00737"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051537">
        <property type="term" value="F:2 iron, 2 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016655">
        <property type="term" value="F:oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006814">
        <property type="term" value="P:sodium ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00207">
        <property type="entry name" value="fer2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00430">
        <property type="entry name" value="NqrF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036010">
        <property type="entry name" value="2Fe-2S_ferredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001041">
        <property type="entry name" value="2Fe-2S_ferredoxin-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012675">
        <property type="entry name" value="Beta-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008333">
        <property type="entry name" value="Cbr1-like_FAD-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017927">
        <property type="entry name" value="FAD-bd_FR_type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039261">
        <property type="entry name" value="FNR_nucleotide-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010205">
        <property type="entry name" value="NqrF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001433">
        <property type="entry name" value="OxRdtase_FAD/NAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017938">
        <property type="entry name" value="Riboflavin_synthase-like_b-brl"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00970">
        <property type="entry name" value="FAD_binding_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00111">
        <property type="entry name" value="Fer2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00175">
        <property type="entry name" value="NAD_binding_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000044">
        <property type="entry name" value="Cis_Diol_DH_RD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52343">
        <property type="entry name" value="SSF52343"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54292">
        <property type="entry name" value="SSF54292"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63380">
        <property type="entry name" value="SSF63380"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01941">
        <property type="entry name" value="nqrF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51085">
        <property type="entry name" value="2FE2S_FER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51384">
        <property type="entry name" value="FAD_FR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11 25" id="KW-0001">2Fe-2S</keyword>
    <keyword evidence="9" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="8 25" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="13 25" id="KW-0274">FAD</keyword>
    <keyword evidence="10 25" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="19 25" id="KW-0406">Ion transport</keyword>
    <keyword evidence="15 25" id="KW-0408">Iron</keyword>
    <keyword evidence="16 25" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="21 25" id="KW-0472">Membrane</keyword>
    <keyword evidence="12 25" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="17 25" id="KW-0520">NAD</keyword>
    <keyword evidence="28" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="29" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="18 25" id="KW-0915">Sodium</keyword>
    <keyword evidence="22 25" id="KW-0739">Sodium transport</keyword>
    <keyword evidence="14 25" id="KW-1278">Translocase</keyword>
    <keyword evidence="25" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="25" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="25" id="KW-0813">Transport</keyword>
    <keyword evidence="20 25" id="KW-0830">Ubiquinone</keyword>
    <feature type="domain" description="2Fe-2S ferredoxin-type" evidence="26">
        <location>
            <begin position="33"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="domain" description="FAD-binding FR-type" evidence="27">
        <location>
            <begin position="128"/>
            <end position="268"/>
        </location>
    </feature>
    <feature type="binding site" evidence="25">
        <location>
            <position position="68"/>
        </location>
        <ligand>
            <name>[2Fe-2S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:190135"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="25">
        <location>
            <position position="74"/>
        </location>
        <ligand>
            <name>[2Fe-2S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:190135"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="25">
        <location>
            <position position="77"/>
        </location>
        <ligand>
            <name>[2Fe-2S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:190135"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="25">
        <location>
            <position position="109"/>
        </location>
        <ligand>
            <name>[2Fe-2S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:190135"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00002972"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00005570"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00011309"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00013099"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00019729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022519"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022714"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00022967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="ARBA" id="ARBA00023053"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="20">
        <source>
            <dbReference type="ARBA" id="ARBA00023075"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="21">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="22">
        <source>
            <dbReference type="ARBA" id="ARBA00023201"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="23">
        <source>
            <dbReference type="ARBA" id="ARBA00030032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="24">
        <source>
            <dbReference type="ARBA" id="ARBA00030787"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="25">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00430"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="26">
        <source>
            <dbReference type="PROSITE" id="PS51085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="27">
        <source>
            <dbReference type="PROSITE" id="PS51384"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="28">
        <source>
            <dbReference type="EMBL" id="CTQ65733.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="29">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="406" mass="45478" checksum="53E333A44DBB5FE0" modified="2015-12-09" version="1">MATFGLGILLFTLIVLALVTIILAARSRLVSMGNVNISINGEKTISVPAGGKLLQTLAEQKLFVPSACGGGGTCAQCRVKIFSGGGSILPTEEGHITKREAACGDRLSCQVAVKQDMEIEVPEEVFGVKKWRCKVRSNENVATFIKELVLELPEGEDVNFRAGGYIQIECPPYELSYKEFDVDEEYHEDWDRFKIWDVSSKVAEPVERAYSMANYPEEKGIVMLNVRIASPPPGSQGIPAGKMSSYIFNLKPGDEVTISGPFGEFFARDTKKEMVFVGGGAGMAPMRSHIFDQMRRIKTDRKVTFWYGARSKREMFYVEDFDMLERENDNFEWHVALSDAVPEDDWKGYTGFIHNVLYDEYLKDHPAPEDCEFYMCGPPIMNQSVINMLLDLGVDREDIMLDDFGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXG0</accession>
    <name>A0A0M6ZXG0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Capsular polysaccharide biosynthesis protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_00911</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66213.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ66213">
        <property type="protein sequence ID" value="CTQ66213"/>
        <property type="gene ID" value="LAX5112_00911"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016757">
        <property type="term" value="F:glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007657">
        <property type="entry name" value="Glycosyltransferase_61"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04577">
        <property type="entry name" value="Glyco_transf_61"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="1" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ66213.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="369" mass="42042" checksum="CBDF491ADF9A355D" modified="2015-12-09" version="1">MNYPFRDQYHRLRKPLLRLCDSLLPARPRSDFLQPLLERTSNPFCFETAAPMPEQARAWAEERKGATEREGLYKALAPCSVDPKIGVLFHQGRVIWKTSDLPERERSPLFFAHRKSPARQLPEAIVLHHVFGDNYFHFFMFIMNKVWLVEQFGLPRSIPFLVNATSANTPFFRQAQELGAFFGRDVVVQGRREIVKVDQAYLALPFFCNAETMTWIAGVFRDEIDETSEQSDRPVFTIRSSTAPNGRLFRNQDEVSRLAEKAGFEVLDPATMTLKEQANRFAKAPIIAGAHGAALTNMIFRAGKPTGVIELFSPSMGSPHYAMMAREFGFCYRSTLTKNPEGRTFTASTEVDLVELEKMFDDMLAQVQN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXT5</accession>
    <name>A0A0M6ZXT5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">PG_binding_1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01205</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67081.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671044.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67081">
        <property type="protein sequence ID" value="CTQ67081"/>
        <property type="gene ID" value="LAX5112_01205"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.101.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013423">
        <property type="entry name" value="CHP02594"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002477">
        <property type="entry name" value="Peptidoglycan-bd-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036365">
        <property type="entry name" value="PGBD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036366">
        <property type="entry name" value="PGBDSf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01471">
        <property type="entry name" value="PG_binding_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47090">
        <property type="entry name" value="SSF47090"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02594">
        <property type="entry name" value="TIGR02594"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PG_binding_1" evidence="2">
        <location>
            <begin position="6"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="218"/>
            <end position="238"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="223"/>
            <end position="238"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ67081.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="238" mass="26306" checksum="096317B2D7510C8F" modified="2015-12-09" version="1">MQFSEDLVRTLQTRLSDLRFYTGLIDGKPGLLTQTAVIDFKVHHKLRARAYPGPITLKTMFSDSASRKPNNPVLSTEPAWMTEAVRLKGIREKAGPGSNPEILEWAEDLDLHYPDDDIPWCGLFVAHCMRVGAPNDERPQNILGARNWQPFGVQCEPVLGSILVFWRGSRSGWQGHVGFYAGEDDKAYHVLGGNQSNAVTVARISKSRLLSARWPASVPVSGKPVRQSANGSLSQNEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZY03</accession>
    <name>A0A0M6ZY03_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">NUDIX domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01185</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67032.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671027.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01185"/>
    <dbReference type="EnsemblBacteria" id="CTQ67032">
        <property type="protein sequence ID" value="CTQ67032"/>
        <property type="gene ID" value="LAX5112_01185"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="CDD" id="cd07067">
        <property type="entry name" value="HP_PGM_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1240">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013078">
        <property type="entry name" value="His_Pase_superF_clade-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029033">
        <property type="entry name" value="His_PPase_superfam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015797">
        <property type="entry name" value="NUDIX_hydrolase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000086">
        <property type="entry name" value="NUDIX_hydrolase_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00293">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53254">
        <property type="entry name" value="SSF53254"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55811">
        <property type="entry name" value="SSF55811"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51462">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nudix hydrolase" evidence="1">
        <location>
            <begin position="168"/>
            <end position="295"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51462"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67032.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="295" mass="31877" checksum="CDB2AE286056FD0A" modified="2015-12-09" version="1">MTKKASELLLLCAGAGAKNWDGAEPDRPLRTKGKRQAQKIGAWMGQHGLLPGKTLTSTDERAMATAQKALKAGGWSAQGVVQSPDLTKGVMPAIADEDRVLLVASKNTVADLISALGVHESLSTGVLVHLESAQKGAEICKVIDPQDLLDLFPYPGPDGPELRERPAYYYTQSAVIPFRRTPEGKEILITGSSSGRHWVVPKGIVDPGLSPAESAKVEAREEAGVEGDFSDQPLGTFTYEKWGAVCRVEVFAMEVTRILPADAWEESHRQRTWVQAETAAAMLYQKAFGPFIAQL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZY43</accession>
    <name>A0A0M6ZY43_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01278</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67227.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671110.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67227">
        <property type="protein sequence ID" value="CTQ67227"/>
        <property type="gene ID" value="LAX5112_01278"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67227.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="116" mass="13076" checksum="9CD9779395BE6231" modified="2015-12-09" version="1">MELKDFSQTNRRRCEDPEGFNQPVNHWTLSDWFTALSGELGEAANVAKKLNRERDGIPGNSETPEQLRQMLADELADTFIYLDLLAQSEGIDLSEAIPAKFNRTSDKVGCPIKFES</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZY58</accession>
    <name>A0A0M6ZY58_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01289</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67247.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671119.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67247">
        <property type="protein sequence ID" value="CTQ67247"/>
        <property type="gene ID" value="LAX5112_01289"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047429">
        <property type="term" value="F:nucleoside-triphosphate diphosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009143">
        <property type="term" value="P:nucleoside triphosphate catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025984">
        <property type="entry name" value="DCTPP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12643">
        <property type="entry name" value="MazG-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67247.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="110" mass="12018" checksum="5ED1C3B776006731" modified="2015-12-09" version="1">MKFSDLREANITRQKEWPGNDQADIAFRGLEVAGEFGEVAEALKKYLRGTRGIKGSTADLQDVADEMADAIIALDLLADQMGIDLGAAVTRKFNRTSKKYGLVTRLPASD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZY65</accession>
    <name>A0A0M6ZY65_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative NADPH-quinone reductase (Modulator of drug activity B)</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01499</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67735.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671308.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01499"/>
    <dbReference type="EnsemblBacteria" id="CTQ67735">
        <property type="protein sequence ID" value="CTQ67735"/>
        <property type="gene ID" value="LAX5112_01499"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.360">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003680">
        <property type="entry name" value="Flavodoxin_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029039">
        <property type="entry name" value="Flavoprotein-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02525">
        <property type="entry name" value="Flavodoxin_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52218">
        <property type="entry name" value="SSF52218"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Flavodoxin_2" evidence="1">
        <location>
            <begin position="3"/>
            <end position="188"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67735.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="193" mass="21609" checksum="4DD52DA57C47D67C" modified="2015-12-09" version="1">MSKKILVLDGHPAKDSFCGALAQTYADAAKKSGHDVRMVHLADLSFDPDLGSASEASTKEWEEDLETFWDTLEWCNHFVLAHPLWWGGMPAKLKGLIDRILLPGKAYKFVSGKALPEKLMAGRTSEVLVTSDTPHWYFKFIYGQGIKKQTKMQILDFCGLKMKNYSWFAPIQGSTEQARAKMIRRAAQLGAAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYH7</accession>
    <name>A0A0M6ZYH7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Rhodanese-like domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01486</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67699.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671449.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01486"/>
    <dbReference type="EnsemblBacteria" id="CTQ67699">
        <property type="protein sequence ID" value="CTQ67699"/>
        <property type="gene ID" value="LAX5112_01486"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.250.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001763">
        <property type="entry name" value="Rhodanese-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036873">
        <property type="entry name" value="Rhodanese-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00581">
        <property type="entry name" value="Rhodanese"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00450">
        <property type="entry name" value="RHOD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52821">
        <property type="entry name" value="SSF52821"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50206">
        <property type="entry name" value="RHODANESE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Rhodanese" evidence="1">
        <location>
            <begin position="39"/>
            <end position="130"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50206"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67699.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="138" mass="14761" checksum="881FB658791BB4C1" modified="2015-12-09" version="1">MSFVTDIPPASSPDAARHFSARLSFETDCADVADALASGRVDFVLLHVVGSAETFARKHIPGALHLPHRDITAERMADWPEDTVFVTYCAGPHCNGADRAAVKLAELDRPVKIMIGGLTGWQDEGFAFAKPAVTVAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZ39</accession>
    <name>A0A0M6ZZ39_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01393</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67442.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671194.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67442">
        <property type="protein sequence ID" value="CTQ67442"/>
        <property type="gene ID" value="LAX5112_01393"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043708">
        <property type="entry name" value="DUF5648"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18885">
        <property type="entry name" value="DUF5648"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67442.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="299" mass="32366" checksum="FDA950A4083B6776" modified="2015-12-09" version="1">MSAENTSLSQQAEPATMEEIRPDVIRGISLHRADEHTHQRIGFALDDAVTSAGKDGVASTVDAVFTAAMGAEIGQVFETAFTSFLSGVDVPPGGGETFSTTQIRSVLTNAINGISDAQYQALSEANGGELRSWELSNMIKTSAHELNLALSNLAGPEGAVYRFFNSESGSHFYTTSVEERDDIVANLPHLLLEGPVFITEGLGTALHRFYNTLTDAHFFTTAEEEKAYVEASFPQFAYEGVAMYVYTDATGSSDQGVFRLYNEQTGKHLFTASQAEADNVQNVLGWKLESSNAFYVEIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZ60</accession>
    <name>A0A0M6ZZ60_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">p-hydroxyphenylacetate 3-hydroxylase, reductase component</fullName>
            <ecNumber evidence="2">1.5.1.36</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">C1-hpah_1</name>
        <name evidence="2" type="ORF">LAX5112_01103</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.5.1.36" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66814.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670968.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01103"/>
    <dbReference type="EnsemblBacteria" id="CTQ66814">
        <property type="protein sequence ID" value="CTQ66814"/>
        <property type="gene ID" value="LAX5112_01103"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0036382">
        <property type="term" value="F:flavin reductase (NADH) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010181">
        <property type="term" value="F:FMN binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002563">
        <property type="entry name" value="Flavin_Rdtase-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012349">
        <property type="entry name" value="Split_barrel_FMN-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01613">
        <property type="entry name" value="Flavin_Reduct"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00903">
        <property type="entry name" value="Flavin_Reduct"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Flavin_Reduct" evidence="1">
        <location>
            <begin position="26"/>
            <end position="167"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00903"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66814.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="171" mass="19076" checksum="54BCF4A91444C4C0" modified="2015-12-09" version="1">MTMQTADHTVTFAPHSENSRLLRDAFGRFATGVTVVTTHSEDGPVGITANSFSSVSMDPPLVLWMPDKGSRRFRYFEQAERYAIHVLSHEQAEICNGFVKNAHAFDQLTYQLCQNNVPLIENCLARFECKRFAAYEGGDHLIVLGEVMQAEMRTGDALTFFSGKLGQIAPK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="37" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A113</accession>
    <name>A0A0M7A113_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Homoserine O-acetyltransferase</fullName>
            <shortName evidence="4">HAT</shortName>
            <ecNumber evidence="4">2.3.1.31</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">Homoserine transacetylase</fullName>
            <shortName evidence="4">HTA</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="primary">metA</name>
        <name evidence="4" type="synonym">metAA</name>
        <name evidence="7" type="ORF">LAX5112_01844</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>acetyl-CoA + L-homoserine = CoA + O-acetyl-L-homoserine</text>
            <dbReference type="Rhea" id="RHEA:13701"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57288"/>
            <dbReference type="ChEBI" id="CHEBI:57476"/>
            <dbReference type="ChEBI" id="CHEBI:57716"/>
            <dbReference type="EC" id="2.3.1.31"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="4">Amino-acid biosynthesis; L-methionine biosynthesis via de novo pathway; O-acetyl-L-homoserine from L-homoserine: step 1/1.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the MetA family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.31" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68685.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008192704.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01844"/>
    <dbReference type="EnsemblBacteria" id="CTQ68685">
        <property type="protein sequence ID" value="CTQ68685"/>
        <property type="gene ID" value="LAX5112_01844"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00051">
        <property type="reaction ID" value="UER00074"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004414">
        <property type="term" value="F:homoserine O-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008899">
        <property type="term" value="F:homoserine O-succinyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019281">
        <property type="term" value="P:L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03131">
        <property type="entry name" value="GATase1_HTS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00295">
        <property type="entry name" value="MetA_acyltransf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005697">
        <property type="entry name" value="HST_MetA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033752">
        <property type="entry name" value="MetA_family"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20919">
        <property type="entry name" value="PTHR20919"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04204">
        <property type="entry name" value="HTS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000450">
        <property type="entry name" value="H_ser_succinyltr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="SSF52317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01001">
        <property type="entry name" value="metA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 7" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="4" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="1 4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4" id="KW-0486">Methionine biosynthesis</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4 7" id="KW-0808">Transferase</keyword>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="251"/>
            <end position="270"/>
        </location>
    </feature>
    <feature type="active site" description="Acyl-thioester intermediate" evidence="4 5">
        <location>
            <position position="142"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="4">
        <location>
            <position position="235"/>
        </location>
    </feature>
    <feature type="active site" evidence="4">
        <location>
            <position position="237"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="163"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="192"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="249"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="site" description="Important for acyl-CoA specificity" evidence="4">
        <location>
            <position position="111"/>
        </location>
    </feature>
    <feature type="site" description="Important for substrate specificity" evidence="4">
        <location>
            <position position="192"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR000450-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ68685.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="305" mass="35408" checksum="770459CCF5515975" modified="2015-12-09" version="1">MPIKIPNDLPGRPILESEGVMIIQEADAMRQDIRPLRIGLLNLMPNKIKTETQFARLLGSTPLQIDLTLVRMTNHVPRNTPTEHLEAFYRPWEEVRNEKFDGFIITGAPVEKLPFEDVGYWQEMRDVLDWTQTHVHRTLTICWAAQAATYHFHGMPKYARDDKATGVYRQRTLAPASPYLRGFSDDFCLPVSRWTETRKVDIPDGSNLMVLAEDDETGMCLLDDPEHRCLHMFNHIEYDTTSLADEFERDSQVSDTPLRPQNYFPDDDATRQPVNRWRAHAHLLFGNWINEMYQSTPFDLNDIGH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1K9</accession>
    <name>A0A0M7A1K9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Inner membrane protein YnbA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ynbA</name>
        <name evidence="3" type="ORF">LAX5112_01657</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68160.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671423.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01657"/>
    <dbReference type="EnsemblBacteria" id="CTQ68160">
        <property type="protein sequence ID" value="CTQ68160"/>
        <property type="gene ID" value="LAX5112_01657"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016780">
        <property type="term" value="F:phosphotransferase activity, for other substituted phosphate groups"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008654">
        <property type="term" value="P:phospholipid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.1760">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000462">
        <property type="entry name" value="CDP-OH_P_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043130">
        <property type="entry name" value="CDP-OH_PTrfase_TM_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01066">
        <property type="entry name" value="CDP-OH_P_transf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0464">Manganese</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="21"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="48"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="117"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="152"/>
            <end position="168"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ68160.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="203" mass="21729" checksum="F1B243E411B6FCC3" modified="2015-12-09" version="1">MPTIYQLKSRFQDLLRPICKNLASAGVTANQVTLVALALSIAEGLALLIFPGAFWPFILLPVILFVRMGLNAIDGMLAREHDQKSDLGAILNELGDVLSDAALYLPFAALPFFPGELVVGLVVLAIIGEMTGVIAVQIGASRRYDGPFGKSDRAALFGLCGVLVAFGLTSEPFFVILMGLGVLLSAVTIWNRAKNALRELETQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1P0</accession>
    <name>A0A0M7A1P0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transglutaminase-like superfamily protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01766</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68511.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671495.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01766"/>
    <dbReference type="EnsemblBacteria" id="CTQ68511">
        <property type="protein sequence ID" value="CTQ68511"/>
        <property type="gene ID" value="LAX5112_01766"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013589">
        <property type="entry name" value="Bac_transglu_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002931">
        <property type="entry name" value="Transglutaminase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08379">
        <property type="entry name" value="Bact_transglu_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01841">
        <property type="entry name" value="Transglut_core"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00460">
        <property type="entry name" value="TGc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="SSF54001"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TGc" evidence="1">
        <location>
            <begin position="158"/>
            <end position="222"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00460"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68511.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="272" mass="29792" checksum="A612ED4995173758" modified="2015-12-09" version="1">MRLFVRHTTRYKYDQPLANAMQQLRLTPVDNPAQRIIDWNIEAPGIERATTYSDAFDNIVHMVSRAGPVEDVEITATGTVETTETNGVIGKEKGASAPARIYTRVTPLTHSNQAIRKLATLAEVPDPIGGFHELMHAIRDKVDYKVGVTETHASSTTALAAGEGVCQDHAHIFIAAARSIGTPARYVSGYLLLEDEQASEAHHAWAEVRIEGLGWVGFDVSNTICPTERYIRLTTGLDSRSAAPIRGIRFGGQEENLHVEVDVAQAALQQQQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A276</accession>
    <name>A0A0M7A276_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01792</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68572.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671517.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01792"/>
    <dbReference type="EnsemblBacteria" id="CTQ68572">
        <property type="protein sequence ID" value="CTQ68572"/>
        <property type="gene ID" value="LAX5112_01792"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018714">
        <property type="entry name" value="DUF2237"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37466">
        <property type="entry name" value="PTHR37466"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09996">
        <property type="entry name" value="DUF2237"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ68572.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="119" mass="12870" checksum="D133352DC93C4CD4" modified="2015-12-09" version="1">MAKNILGDLLESCCTDPMTGYLRDGFCATHDQDRGSHVICAVVTEAFLSFTKARGNDLQTPIPAYGFPGLKPGDGWCLCALRWKEAHGAGAAPKIKARATHESALNFVSKDVLLAYRID</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A278</accession>
    <name>A0A0M7A278_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Methyl-accepting chemotaxis protein 4</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">mcp4_5</name>
        <name evidence="9" type="ORF">LAX5112_01853</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="3">Belongs to the methyl-accepting chemotaxis (MCP) protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68701.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671559.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01853"/>
    <dbReference type="EnsemblBacteria" id="CTQ68701">
        <property type="protein sequence ID" value="CTQ68701"/>
        <property type="gene ID" value="LAX5112_01853"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004888">
        <property type="term" value="F:transmembrane signaling receptor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006935">
        <property type="term" value="P:chemotaxis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033462">
        <property type="entry name" value="Cache_3-Cache_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004090">
        <property type="entry name" value="Chemotax_Me-accpt_rcpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004089">
        <property type="entry name" value="MCPsignal_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029151">
        <property type="entry name" value="Sensor-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000727">
        <property type="entry name" value="T_SNARE_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17201">
        <property type="entry name" value="Cache_3-Cache_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00015">
        <property type="entry name" value="MCPsignal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00260">
        <property type="entry name" value="CHEMTRNSDUCR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00283">
        <property type="entry name" value="MA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103190">
        <property type="entry name" value="SSF103190"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50111">
        <property type="entry name" value="CHEMOTAXIS_TRANSDUC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50192">
        <property type="entry name" value="T_SNARE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4" id="KW-0807">Transducer</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="202"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="8">
        <location>
            <begin position="222"/>
            <end position="275"/>
        </location>
    </feature>
    <feature type="domain" description="Methyl-accepting transducer" evidence="6">
        <location>
            <begin position="308"/>
            <end position="551"/>
        </location>
    </feature>
    <feature type="domain" description="T-SNARE coiled-coil homology" evidence="7">
        <location>
            <begin position="467"/>
            <end position="529"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023224"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00029447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ68701.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="571" mass="60407" checksum="DEE4C855B0543F5E" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2L9</accession>
    <name>A0A0M7A2L9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Aspartate carbamoyltransferase</fullName>
            <ecNumber evidence="6">2.1.3.2</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Aspartate transcarbamylase</fullName>
            <shortName evidence="6">ATCase</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6 10" type="primary">pyrB</name>
        <name evidence="10" type="ORF">LAX5112_01866</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 6">
            <text>carbamoyl phosphate + L-aspartate = H(+) + N-carbamoyl-L-aspartate + phosphate</text>
            <dbReference type="Rhea" id="RHEA:20013"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29991"/>
            <dbReference type="ChEBI" id="CHEBI:32814"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58228"/>
            <dbReference type="EC" id="2.1.3.2"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 6">Pyrimidine metabolism; UMP biosynthesis via de novo pathway; (S)-dihydroorotate from bicarbonate: step 2/3.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 6">Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.</text>
    </comment>
    <dbReference type="EC" id="2.1.3.2" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68732.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01866"/>
    <dbReference type="EnsemblBacteria" id="CTQ68732">
        <property type="protein sequence ID" value="CTQ68732"/>
        <property type="gene ID" value="LAX5112_01866"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00070">
        <property type="reaction ID" value="UER00116"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016597">
        <property type="term" value="F:amino acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004070">
        <property type="term" value="F:aspartate carbamoyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006207">
        <property type="term" value="P:'de novo' pyrimidine nucleobase biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044205">
        <property type="term" value="P:'de novo' UMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006520">
        <property type="term" value="P:cellular amino acid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1370">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00001">
        <property type="entry name" value="Asp_carb_tr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006132">
        <property type="entry name" value="Asp/Orn_carbamoyltranf_P-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006130">
        <property type="entry name" value="Asp/Orn_carbamoylTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036901">
        <property type="entry name" value="Asp/Orn_carbamoylTrfase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002082">
        <property type="entry name" value="Asp_carbamoyltransf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006131">
        <property type="entry name" value="Asp_carbamoyltransf_Asp/Orn-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11405:SF16">
        <property type="entry name" value="PTHR11405:SF16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00185">
        <property type="entry name" value="OTCace"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02729">
        <property type="entry name" value="OTCace_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00100">
        <property type="entry name" value="AOTCASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53671">
        <property type="entry name" value="SSF53671"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00670">
        <property type="entry name" value="asp_carb_tr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00097">
        <property type="entry name" value="CARBAMOYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0665">Pyrimidine biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6 7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="OTCace_N" evidence="9">
        <location>
            <begin position="95"/>
            <end position="237"/>
        </location>
    </feature>
    <feature type="domain" description="OTCace" evidence="8">
        <location>
            <begin position="246"/>
            <end position="390"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004852"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008896"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00001"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003634"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00185"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF02729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ68732.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="398" mass="43875" checksum="D403CED7C2F71C55" modified="2015-12-09" version="1">MSTLNALFSLRKRNKIVEINATTDRCAVRILPNLTHGQIEECASFKFDHLIKVLVCMWTAGRDLIPALCADPFHLKKMISMSEQESYRDNPFPHRHLLGIEGLHPHEILGLLDRAEEAVEISRQVHKRKHVLQGRTQINLFFEASTRTQSSFELAGKRLGADVMNMAVSQSSVKKGETLIDTAATLNAMHPDLLVVRHHAAGAVHLLARKVGCAVVNAGDGPHEHPTQALLDALTIRRHKGKIARLTVAICGDIAHSRVARSNIILLNALGARVRVIAPSTLLPSGIAQMGAEVYQDMREGLKGADIVMMLRLQRERMNGAFIPSVREYYRYYGLDAEKLSHAKDDALVMHPGPMNRGVEIDPAIADGPQSLIREQVEMGVAVRMAVLEALADNLPTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2N8</accession>
    <name>A0A0M7A2N8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Putative pre-16S rRNA nuclease</fullName>
            <ecNumber evidence="3">3.1.-.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">yrrK</name>
        <name evidence="5" type="ORF">LAX5112_01869</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the YqgF HJR family.</text>
    </comment>
    <dbReference type="EC" id="3.1.-.-" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68742.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671570.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01869"/>
    <dbReference type="EnsemblBacteria" id="CTQ68742">
        <property type="protein sequence ID" value="CTQ68742"/>
        <property type="gene ID" value="LAX5112_01869"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004518">
        <property type="term" value="F:nuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000967">
        <property type="term" value="P:rRNA 5'-end processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd16964">
        <property type="entry name" value="YqgF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00651">
        <property type="entry name" value="Nuclease_YqgF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005227">
        <property type="entry name" value="YqgF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006641">
        <property type="entry name" value="YqgF/RNaseH-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037027">
        <property type="entry name" value="YqgF/RNaseH-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33317">
        <property type="entry name" value="PTHR33317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03652">
        <property type="entry name" value="RuvX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00732">
        <property type="entry name" value="YqgFc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00250">
        <property type="entry name" value="RNAse_H_YqgF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 3" id="KW-0540">Nuclease</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 3" id="KW-0690">Ribosome biogenesis</keyword>
    <feature type="domain" description="YqgFc" evidence="4">
        <location>
            <begin position="20"/>
            <end position="120"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022517"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00732"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ68742.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="161" mass="17542" checksum="A143B5E109BDF7B8" modified="2015-12-09" version="1">MANDPTLSLEDFIAAVPDRTRLIGLDLGTKTIGLALSDLGRGIASPMETIRRKKFTLDAEQLLKICNEQGVGGLVLGFPLNMDGTEGPRVQATRAFTRNLAPKTDLPMTFWDERLSTAAVTRTLLEADSSRAKRAEVVDKMAAAYILQGFLDRLGFMGLET</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2R3</accession>
    <name>A0A0M7A2R3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01877</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68762.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_050775956.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ68762">
        <property type="protein sequence ID" value="CTQ68762"/>
        <property type="gene ID" value="LAX5112_01877"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809246" evidence="2">
        <location>
            <begin position="29"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="132"/>
            <end position="157"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ68762.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="157" mass="15838" checksum="C35F80CC8FEFC1B1" modified="2015-12-09" version="1">MRTTFSRTLSYSVLVLPLLLFAVSPSKADGTDCVVYATDYANAHVGSGNMVGDAVSGGMTGAVVGGQWNPLTGGAARGARTGAALGVLNNLGSVPQGWQALYDMAYQICTQQNSGATAAPYGAGVMPNCRSTASVDGPSERSPDGGLMVGSGGRNCR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3E7</accession>
    <name>A0A0M7A3E7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Putative thiol oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">LAX5112_02176</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69595.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02176"/>
    <dbReference type="EnsemblBacteria" id="CTQ69595">
        <property type="protein sequence ID" value="CTQ69595"/>
        <property type="gene ID" value="LAX5112_02176"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.760.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009056">
        <property type="entry name" value="Cyt_c-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036909">
        <property type="entry name" value="Cyt_c-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010538">
        <property type="entry name" value="DHOR"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06537">
        <property type="entry name" value="DHOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF028099">
        <property type="entry name" value="DUF1111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46626">
        <property type="entry name" value="SSF46626"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51007">
        <property type="entry name" value="CYTC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 4" id="KW-0349">Heme</keyword>
    <keyword evidence="3 4" id="KW-0408">Iron</keyword>
    <keyword evidence="2 4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cytochrome c" evidence="5">
        <location>
            <begin position="426"/>
            <end position="558"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00433"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ69595.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="558" mass="60801" checksum="A4465199C826C67A" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3Y7</accession>
    <name>A0A0M7A3Y7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 5">50S ribosomal protein L6</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3 7" type="primary">rplF</name>
        <name evidence="7" type="ORF">LAX5112_01741</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3 5">This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">Part of the 50S ribosomal subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 4">Belongs to the universal ribosomal protein uL6 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68443.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671481.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01741"/>
    <dbReference type="EnsemblBacteria" id="CTQ68443">
        <property type="protein sequence ID" value="CTQ68443"/>
        <property type="gene ID" value="LAX5112_01741"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.930.12">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01365_B">
        <property type="entry name" value="Ribosomal_L6_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000702">
        <property type="entry name" value="Ribosomal_L6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020040">
        <property type="entry name" value="Ribosomal_L6_a/b-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036789">
        <property type="entry name" value="Ribosomal_L6_a/b-dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019906">
        <property type="entry name" value="Ribosomal_L6_bac-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002358">
        <property type="entry name" value="Ribosomal_L6_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11655">
        <property type="entry name" value="PTHR11655"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11655:SF14">
        <property type="entry name" value="PTHR11655:SF14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00347">
        <property type="entry name" value="Ribosomal_L6"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002162">
        <property type="entry name" value="Ribosomal_L6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00059">
        <property type="entry name" value="RIBOSOMALL6"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56053">
        <property type="entry name" value="SSF56053"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03654">
        <property type="entry name" value="L6_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00525">
        <property type="entry name" value="RIBOSOMAL_L6_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="1 3 4" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="3 5" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="3 5" id="KW-0699">rRNA-binding</keyword>
    <feature type="domain" description="Ribosomal_L6" evidence="6">
        <location>
            <begin position="11"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="domain" description="Ribosomal_L6" evidence="6">
        <location>
            <begin position="91"/>
            <end position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01365"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003869"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU003870"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00347"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ68443.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="177" mass="19334" checksum="919187002B723599" modified="2015-12-09" version="1">MSRIGKKPVPVPSGVTASIDGQTVTIKGPKGEKSFMLNELVLAEMTDDGIKIDPRNDSKPARSMWGMSRTMVQNLITGVTDGFKKDLAITGVGYRAQVQGQNLQLALGFSHDVIYAIPEGIEIKCAKPTEISVSGTDKQRVGQVAAEIREFRPPEPYKGKGVRYADEFIVRKEGKKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4H3</accession>
    <name>A0A0M7A4H3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02133</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69491.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ69491">
        <property type="protein sequence ID" value="CTQ69491"/>
        <property type="gene ID" value="LAX5112_02133"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002514">
        <property type="entry name" value="Transposase_8"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01527">
        <property type="entry name" value="HTH_Tnp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ69491.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="95" mass="10840" checksum="6DBC69394AA93632" modified="2015-12-09" version="1">MKRSRFSEEQIIGILKEHQAVLSAAELCRKYGVSDATFYKWHSKYGGMEVSEAKRLKVLEEENAKLKKLLAESMMDVSTLREMLGMGAGERHAFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4X6</accession>
    <name>A0A0M7A4X6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">LAX5112_02291</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ69939.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008194092.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02291"/>
    <dbReference type="EnsemblBacteria" id="CTQ69939">
        <property type="protein sequence ID" value="CTQ69939"/>
        <property type="gene ID" value="LAX5112_02291"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011330">
        <property type="entry name" value="Glyco_hydro/deAcase_b/a-brl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006879">
        <property type="entry name" value="YdjC-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04794">
        <property type="entry name" value="YdjC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88713">
        <property type="entry name" value="SSF88713"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="3" id="KW-0460">Magnesium</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ69939.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="265" mass="29948" checksum="415BDD97944C48C3" modified="2015-12-09" version="1">MKRITLGALDYGLAFGVDRALRDLAEQGRISALGALVATELWPREFRPLIETVKASSSRTLFGITLAFTGDRVSPVSSRMHQTYGDRMFSRSKMNRLALLRLLPDELLLEETLAQLGRYTVLMKRQPDFVAVRDGMLARSSVARTVFKAIGHAGFDTPPLIISPVRSGLKTLRLQRLAKPYDLKFLPKADPLPEVSDREELHRLLHNHFDGMADMSFVAAIPGKADDRLRREEPKAKIAIRECQYDVLASDRFFHTLEKKDVFLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5C2</accession>
    <name>A0A0M7A5C2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02468</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70325.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008193146.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02468"/>
    <dbReference type="EnsemblBacteria" id="CTQ70325">
        <property type="protein sequence ID" value="CTQ70325"/>
        <property type="gene ID" value="LAX5112_02468"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ70325.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="90" mass="9649" checksum="9E4E3A5EAF168D88" modified="2015-12-09" version="1">MINDDYAEAAMEAEFAEDEDIRRAALGFISEAWSEAIANGVDADAVAHAAMFTALADLVAAYGEDAVAKLAEGLPDRIQRGDYTVNRVLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5K6</accession>
    <name>A0A0M7A5K6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">4Fe-4S ferredoxin-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02289</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69881.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02289"/>
    <dbReference type="EnsemblBacteria" id="CTQ69881">
        <property type="protein sequence ID" value="CTQ69881"/>
        <property type="gene ID" value="LAX5112_02289"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017896">
        <property type="entry name" value="4Fe4S_Fe-S-bd"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51379">
        <property type="entry name" value="4FE4S_FER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="1">
        <location>
            <begin position="126"/>
            <end position="157"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51379"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69881.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="209" mass="22639" checksum="FBE8FFADAC3C2BA3" modified="2015-12-09" version="1">MFGGFKPEDTDLVPETGTGSTSKTLLIIGSTGPGLWPAFKSAPEAEDGQPDPMDRYTRRVLSKIADGFGFQPLFPFDGPPYHPFQKWALKCGGFSQSPFGLLTHTRYGPWAGLRAAFLSADDLDIPTPRETLGPCVTCQEKPCLTACPVDAIQLDTGYDVPRCLEYLGRTPDTGCWSGCQARKACPVGQHHAPDEANGRFHMKSFVGLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5L7</accession>
    <name>A0A0M7A5L7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01976</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ69023.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008189491.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ69023">
        <property type="protein sequence ID" value="CTQ69023"/>
        <property type="gene ID" value="LAX5112_01976"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="37"/>
            <end position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69023.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="64" mass="6874" checksum="004B7ED210762E45" modified="2015-12-09" version="1">MNIKALTLAAAAFSIGFIGEVDLSGIQQGGPVTFQVSEADAQTASRNTARRTARRTSRRQNSYD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5Q7</accession>
    <name>A0A0M7A5Q7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Betaine aldehyde dehydrogenase</fullName>
            <ecNumber evidence="8">1.2.1.8</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">betB_2</name>
        <name evidence="8" type="ORF">LAX5112_02518</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="6">Belongs to the aldehyde dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.2.1.8" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70465.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672094.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70465">
        <property type="protein sequence ID" value="CTQ70465"/>
        <property type="gene ID" value="LAX5112_02518"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008802">
        <property type="term" value="F:betaine-aldehyde dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.309.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.605.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016161">
        <property type="entry name" value="Ald_DH/histidinol_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016163">
        <property type="entry name" value="Ald_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016160">
        <property type="entry name" value="Ald_DH_CS_CYS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029510">
        <property type="entry name" value="Ald_DH_CS_GLU"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016162">
        <property type="entry name" value="Ald_DH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015590">
        <property type="entry name" value="Aldehyde_DH_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00171">
        <property type="entry name" value="Aldedh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53720">
        <property type="entry name" value="SSF53720"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00070">
        <property type="entry name" value="ALDEHYDE_DEHYDR_CYS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00687">
        <property type="entry name" value="ALDEHYDE_DEHYDR_GLU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0521">NADP</keyword>
    <keyword evidence="3 6 8" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-0630">Potassium</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aldedh" evidence="7">
        <location>
            <begin position="30"/>
            <end position="489"/>
        </location>
    </feature>
    <feature type="active site" evidence="4">
        <location>
            <position position="263"/>
        </location>
    </feature>
    <feature type="active site" evidence="5">
        <location>
            <position position="297"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022958"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003345"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ70465.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="495" mass="52319" checksum="728E676602F49C95" modified="2015-12-09" version="1">MTVQDLAANYLSTGRIDGLPDGHFIGGRFTSASDRKMESFDPARAEAFAEFSLGTEADMDAAIEAAEKAAKDWARALPSERCRILNDVARVFRENADRLAVLEVLDSGKTLAEAQGDVQSSARLFEYYAGAADKLDGRSVNLGPDLTAFTVREPVGVTGHIIPWNYPTSTFARGVAPALAAGCSVVAKPAETTPFTALVMAELLSEAGVPDGLVNVVTGLGSDVGAKLARDPRIKQLTFTGSVTTGVNVAQTAAPNVTRLTLELGGKSPLVAFEDADPDKVADGAYWAIFSNSGQICSAGSRLILHKSLRDEVLAILTERASNLKVGHGLKNPDMGAINSDLHLGRIKAHVDAAKARGANILTGGDVTTDPDTGKGWFFQPTVIADLRANDPAVQDEIFGPVLSVQNFETEDEAVELANGTEFGLMASVYTRDTGRAMRVAHALDSGQVSVNDYWAGGLELPFGGNKKSGYGREKGWEGLDAYTKVKAITISNAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6I8</accession>
    <name>A0A0M7A6I8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Phosphonate degradation operons associated HDIG domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02278</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69850.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02278"/>
    <dbReference type="EnsemblBacteria" id="CTQ69850">
        <property type="protein sequence ID" value="CTQ69850"/>
        <property type="gene ID" value="LAX5112_02278"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006674">
        <property type="entry name" value="HD_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01966">
        <property type="entry name" value="HD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HD" evidence="1">
        <location>
            <begin position="56"/>
            <end position="124"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69850.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="201" mass="23168" checksum="5E99BB588581DF1F" modified="2015-12-09" version="1">MKTVSFTQMKDGTKEDYDLLAEAEKPFHAATANRILAELKRQGEDTMTGYKITRMEHGLQSATRALREGADIDWVVGALLHDIGDGLAPQNHDRFSAEVIRPFVRDEVAWVVEHHGIFQTLYYAKHYNWDENARDRFKDHPHFQACADFCERWDQASFDPDYKSETLETFEPMVREVFDRKAYDPAVIQESVSTGLPKLAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A784</accession>
    <name>A0A0M7A784_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="15">Cytochrome c oxidase subunit 2</fullName>
            <ecNumber evidence="15">7.1.1.9</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="20" type="primary">ctaC</name>
        <name evidence="20" type="ORF">LAX5112_02357</name>
    </gene>
    <organism evidence="20 21">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="21" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="21">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="12 15">Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="13 15">
            <text>4 Fe(II)-[cytochrome c] + 8 H(+)(in) + O2 = 4 Fe(III)-[cytochrome c] + 4 H(+)(out) + 2 H2O</text>
            <dbReference type="Rhea" id="RHEA:11436"/>
            <dbReference type="Rhea" id="RHEA-COMP:10350"/>
            <dbReference type="Rhea" id="RHEA-COMP:14399"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:29033"/>
            <dbReference type="ChEBI" id="CHEBI:29034"/>
            <dbReference type="EC" id="7.1.1.9"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="15">
            <name>Cu cation</name>
            <dbReference type="ChEBI" id="CHEBI:23378"/>
        </cofactor>
        <text evidence="15">Binds a copper A center.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="14">Cell membrane</location>
            <topology evidence="14">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 14">Belongs to the cytochrome c oxidase subunit 2 family.</text>
    </comment>
    <dbReference type="EC" id="7.1.1.9" evidence="15"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70100.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02357"/>
    <dbReference type="EnsemblBacteria" id="CTQ70100">
        <property type="protein sequence ID" value="CTQ70100"/>
        <property type="gene ID" value="LAX5112_02357"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070469">
        <property type="term" value="C:respirasome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005507">
        <property type="term" value="F:copper ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004129">
        <property type="term" value="F:cytochrome-c oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd13912">
        <property type="entry name" value="CcO_II_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.90">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.420">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045187">
        <property type="entry name" value="CcO_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002429">
        <property type="entry name" value="CcO_II-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034210">
        <property type="entry name" value="CcO_II_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001505">
        <property type="entry name" value="Copper_CuA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008972">
        <property type="entry name" value="Cupredoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014222">
        <property type="entry name" value="Cyt_c_oxidase_su2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011759">
        <property type="entry name" value="Cyt_c_oxidase_su2_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036257">
        <property type="entry name" value="Cyt_c_oxidase_su2_TM_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22888">
        <property type="entry name" value="PTHR22888"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00116">
        <property type="entry name" value="COX2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02790">
        <property type="entry name" value="COX2_TM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49503">
        <property type="entry name" value="SSF49503"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81464">
        <property type="entry name" value="SSF81464"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02866">
        <property type="entry name" value="CoxB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00078">
        <property type="entry name" value="COX2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50857">
        <property type="entry name" value="COX2_CUA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50999">
        <property type="entry name" value="COX2_TM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10 15" id="KW-0186">Copper</keyword>
    <keyword evidence="8 14" id="KW-0249">Electron transport</keyword>
    <keyword evidence="11 16" id="KW-0472">Membrane</keyword>
    <keyword evidence="6 15" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="20" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="21" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 14" id="KW-0679">Respiratory chain</keyword>
    <keyword evidence="17" id="KW-0732">Signal</keyword>
    <keyword evidence="7" id="KW-1278">Translocase</keyword>
    <keyword evidence="5 14 16" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 16" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3 14" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="17">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809169" description="Cytochrome c oxidase subunit 2" evidence="17">
        <location>
            <begin position="28"/>
            <end position="308"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="51"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="98"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="domain" description="COX2_TM" evidence="19">
        <location>
            <begin position="31"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="domain" description="COX2_CUA" evidence="18">
        <location>
            <begin position="127"/>
            <end position="272"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007866"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022660"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00024688"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00029368"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="RuleBase" id="RU000456"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="RuleBase" id="RU004024"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="18">
        <source>
            <dbReference type="PROSITE" id="PS50857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="19">
        <source>
            <dbReference type="PROSITE" id="PS50999"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="EMBL" id="CTQ70100.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="21">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="308" mass="34427" checksum="048C6565130E2487" modified="2015-12-09" version="1">MKAVFKRLMNLVTMATAFAGVSTAALAAEPGFNNWQLGFQASTSDVMDDITWFNNFTLIIITVITVFVLALLMYCAVKFSAKNNPVPSRTSHNTTIEIVWTVVPILILVIIAIPSFRLLYKQLEIPEYDMTVKAIGYQWYWGYEYTDENMGELYFDSIMVQDADRQEIADARGVSIDEVPRLLAVDYDLVIPVDTTVRLQVTSEDVIHAFAMPTWGVKIDAIPGRLNETWFHAREEGVYYGQCSELCGKDHAFMPIAVRVVSADQFQQWASAAQDDLDVANEQLMASIAEAKKLAAQGELNEISVAAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7A9</accession>
    <name>A0A0M7A7A9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02471</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70332.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672062.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02471"/>
    <dbReference type="EnsemblBacteria" id="CTQ70332">
        <property type="protein sequence ID" value="CTQ70332"/>
        <property type="gene ID" value="LAX5112_02471"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ70332.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="170" mass="18451" checksum="7A801D0212203D85" modified="2015-12-09" version="1">MECVDPVLGAGELASERLEQANINSQTGLATDYLNHFNEVMMLLEMLPAMPDCAADVLEWQPLDYEGHFENSSFKDKKLAILAYHAAPSHLREHLEACASDINVLVAQIQDQLRETEDPSVIAADIAGFATNEIKPLISTASGVIHGHVKPEAEQPEGDAAQAEIDALFA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A867</accession>
    <name>A0A0M7A867_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative enoyl-CoA hydratase echA8</fullName>
            <ecNumber evidence="3">4.2.1.17</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">echA8_4</name>
        <name evidence="3" type="ORF">LAX5112_02769</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the enoyl-CoA hydratase/isomerase family.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.17" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71288.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008193734.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02769"/>
    <dbReference type="EnsemblBacteria" id="CTQ71288">
        <property type="protein sequence ID" value="CTQ71288"/>
        <property type="gene ID" value="LAX5112_02769"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004300">
        <property type="term" value="F:enoyl-CoA hydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.12.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029045">
        <property type="entry name" value="ClpP/crotonase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018376">
        <property type="entry name" value="Enoyl-CoA_hyd/isom_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001753">
        <property type="entry name" value="Enoyl-CoA_hydra/iso"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014748">
        <property type="entry name" value="Enoyl-CoA_hydra_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00378">
        <property type="entry name" value="ECH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52096">
        <property type="entry name" value="SSF52096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00166">
        <property type="entry name" value="ENOYL_COA_HYDRATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0456">Lyase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005254"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU003707"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ71288.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="257" mass="27944" checksum="C61966458DF9328E" modified="2015-12-09" version="1">MGYKNIRVEKRGKVGLITLDRPKALNALNSELIAELGSALDTYDADEKIGCVVITGSEKAFAAGADIKEMQPHTFSTAYQTDLITPFDRVSQNRKPIIAAVAGYALGGGCELAMLCDFIIAADTAKFGQPEITLGVIPGAGGTQRLTRFVGKSKAMDMVLTGRMMDAEEAERSGLVSRIVPANDLLEEALKAAEKIADFSLPVVMMAKESVDRSYETTLSEGVRFERRVFQAMFALEDQKEGMSAFTEKRSPQFNNK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8J6</accession>
    <name>A0A0M7A8J6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Putative flavin-nucleotide-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02593</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70736.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672178.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02593"/>
    <dbReference type="EnsemblBacteria" id="CTQ70736">
        <property type="protein sequence ID" value="CTQ70736"/>
        <property type="gene ID" value="LAX5112_02593"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024747">
        <property type="entry name" value="Pyridox_Oxase-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012349">
        <property type="entry name" value="Split_barrel_FMN-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12900">
        <property type="entry name" value="Pyridox_ox_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ70736.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="220" mass="23977" checksum="03887CE4A91F9ED5" modified="2015-12-09" version="1">MKHEKPDLPPYAKIRQMNRGGYDKDLANEILDAGLVAHCGFIHEGRPMVIPMVYARIDDKLYIHGASTTRIIKDNNAGVPASLEVTLLDGLVFGRSAFHHSMNFRCVIVHGTARLVEDLEEKNIALAAITDHMAPGRWAECREMLPKELKATGVLVLDVEHVSTKVRTGPPVDDPIDIGTDIWAGIVPVATGFGQPYAAADVPDGIEPPASIRAARQKFA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8U4</accession>
    <name>A0A0M7A8U4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Crotonyl-CoA reductase</fullName>
            <ecNumber evidence="2">1.3.1.86</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ccrA2_1</name>
        <name evidence="2" type="ORF">LAX5112_02773</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.3.1.86" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71299.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02773"/>
    <dbReference type="EnsemblBacteria" id="CTQ71299">
        <property type="protein sequence ID" value="CTQ71299"/>
        <property type="gene ID" value="LAX5112_02773"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013149">
        <property type="entry name" value="ADH-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013154">
        <property type="entry name" value="ADH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011032">
        <property type="entry name" value="GroES-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020843">
        <property type="entry name" value="PKS_ER"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08240">
        <property type="entry name" value="ADH_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00107">
        <property type="entry name" value="ADH_zinc_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00829">
        <property type="entry name" value="PKS_ER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50129">
        <property type="entry name" value="SSF50129"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PKS_ER" evidence="1">
        <location>
            <begin position="17"/>
            <end position="355"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71299.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="358" mass="37594" checksum="65948C578733A52A" modified="2015-12-09" version="1">MPEIPNRMSGMVLTAHGGLECLQWREDLVVPVQEPGQVLIKVGAAAVNNTDINTRIGWYSKSVRGDTAATASEGSGGATNTDGGWSGALNFPLVQGADCCGQIVAVGEGVDAGRIGERVLVRPMQVPKKPEHAHLPLVTFGSEFDGGFADYAVANSEDALAVSSKLSDVELASFPCAYSTAEGMIQKSSLGAERVLVTGASGGVGSAAIQLAKRRGAHVTAVTTPEKSEALKEMGADATLGRKDELPEGAFDVVLDLVGGPNFPNLLNCLKNGGRYAVAGAIAGPIVELDLRTLYLKDLAFFGCTRQDPKVFQDLIGYIERGEIRPMISKTFPLKDMVAAQEAFLSKKYAGKIGLLIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9C5</accession>
    <name>A0A0M7A9C5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative glucosyl-3-phosphoglycerate synthase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02418</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70224.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008195986.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02418"/>
    <dbReference type="EnsemblBacteria" id="CTQ70224">
        <property type="protein sequence ID" value="CTQ70224"/>
        <property type="gene ID" value="LAX5112_02418"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001173">
        <property type="entry name" value="Glyco_trans_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00535">
        <property type="entry name" value="Glycos_transf_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glyco_trans_2-like" evidence="1">
        <location>
            <begin position="3"/>
            <end position="83"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00535"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70224.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="230" mass="24486" checksum="6362014804F947F4" modified="2015-12-09" version="1">MISVIIPTENAELDLVHALAALVPAAAEGVVREVVVVDGGSTDNTAMVADAAGCTFVTRKGPRSERLAHGASVAKRGDWLLFLQPETLLESGWHHEAQAFIERAGRTPKGPKTAAAFRLRYEAFGLGPRLSEKAASVRSQLLGMPYGNQGLLISRQFYEKLGGHRPLPEMEDLDLAKRIGRNRMVFLRAAAVCAGEPGAAGYATGLRQALARFAVGALRVPASLAVKLHG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AA14</accession>
    <name>A0A0M7AA14_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">AsnC family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02706</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71070.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040450828.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ71070">
        <property type="protein sequence ID" value="CTQ71070"/>
        <property type="gene ID" value="LAX5112_02706"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019887">
        <property type="entry name" value="Tscrpt_reg_AsnC/Lrp_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01037">
        <property type="entry name" value="AsnC_trans_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AsnC_trans_reg" evidence="1">
        <location>
            <begin position="6"/>
            <end position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01037"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71070.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="78" mass="8711" checksum="89A257196F27883B" modified="2015-12-09" version="1">MTPFFVMIKCQLGKTYQVANAIADAEIASEVYSTSGDYDLLVKFYIEDGTDIGHFVNEKVHPIDGIQDTKSIITFKAF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AA54</accession>
    <name>A0A0M7AA54_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Acyl-CoA dehydrogenase</fullName>
            <ecNumber evidence="11">1.3.99.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">mmgC_3</name>
        <name evidence="11" type="ORF">LAX5112_03011</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 5">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the acyl-CoA dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.3.99.-" evidence="11"/>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72025.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672548.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03011"/>
    <dbReference type="EnsemblBacteria" id="CTQ72025">
        <property type="protein sequence ID" value="CTQ72025"/>
        <property type="gene ID" value="LAX5112_03011"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016627">
        <property type="term" value="F:oxidoreductase activity, acting on the CH-CH group of donors"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.540.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025878">
        <property type="entry name" value="Acyl-CoA_dh-like_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020953">
        <property type="entry name" value="Acyl-CoA_DH_N_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006091">
        <property type="entry name" value="Acyl-CoA_Oxase/DH_mid-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046373">
        <property type="entry name" value="Acyl-CoA_Oxase/DH_mid-dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036250">
        <property type="entry name" value="AcylCo_DH-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009075">
        <property type="entry name" value="AcylCo_DH/oxidase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013786">
        <property type="entry name" value="AcylCoA_DH/ox_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037069">
        <property type="entry name" value="AcylCoA_DH/ox_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009100">
        <property type="entry name" value="AcylCoA_DH/oxidase_NM_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00441">
        <property type="entry name" value="Acyl-CoA_dh_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12806">
        <property type="entry name" value="Acyl-CoA_dh_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02770">
        <property type="entry name" value="Acyl-CoA_dh_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02771">
        <property type="entry name" value="Acyl-CoA_dh_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12418">
        <property type="entry name" value="AcylCoA_DH_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47203">
        <property type="entry name" value="SSF47203"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56645">
        <property type="entry name" value="SSF56645"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0274">FAD</keyword>
    <keyword evidence="3 5" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="5 11" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AcylCoA_DH_N" evidence="9">
        <location>
            <begin position="3"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="domain" description="Acyl-CoA_dh_N" evidence="8">
        <location>
            <begin position="39"/>
            <end position="158"/>
        </location>
    </feature>
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        <location>
            <begin position="163"/>
            <end position="272"/>
        </location>
    </feature>
    <feature type="domain" description="Acyl-CoA_dh_1" evidence="6">
        <location>
            <begin position="282"/>
            <end position="451"/>
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    </feature>
    <feature type="domain" description="Acyl-CoA_dh_C" evidence="10">
        <location>
            <begin position="467"/>
            <end position="593"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009347"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU362125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00441"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF02770"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF02771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF12418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF12806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ72025.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="598" mass="64690" checksum="D47A50D7A0E011FD" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAB4</accession>
    <name>A0A0M7AAB4_9HYPH</name>
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        <submittedName>
            <fullName evidence="3">Membrane protein AbrB duplication</fullName>
        </submittedName>
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    <gene>
        <name evidence="3" type="ORF">LAX5112_03043</name>
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    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
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            <taxon>Roseibium</taxon>
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    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72085.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03043"/>
    <dbReference type="EnsemblBacteria" id="CTQ72085">
        <property type="protein sequence ID" value="CTQ72085"/>
        <property type="gene ID" value="LAX5112_03043"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
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        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017516">
        <property type="entry name" value="AbrB_dup"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007820">
        <property type="entry name" value="AbrB_fam"/>
    </dbReference>
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        <property type="entry name" value="PTHR38457"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05145">
        <property type="entry name" value="AbrB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF038991">
        <property type="entry name" value="Protein_AbrB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03082">
        <property type="entry name" value="Gneg_AbrB_dup"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="12"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="35"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="62"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="86"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="119"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="142"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="186"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="225"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="258"/>
            <end position="282"/>
        </location>
    </feature>
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        <location>
            <begin position="294"/>
            <end position="313"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
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            <begin position="325"/>
            <end position="343"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="348"/>
            <end position="367"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ72085.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="367" mass="38627" checksum="A4392366EB2CF57C" modified="2015-12-09" version="1">MNELRFETLWKFPATLAIAVAGGAVFHLAGLPAAWLSGAMILVAAATLAGMPTVMPNKFRDGLFVLLGISMGAGVQPEVVERVSEWPLSMAMLLLVVVGVTIAGYCVLRYAAHWQKETAFFGAIPGTLAYVIALASERRADLPRIASTQSVRLFFLIALLPFAVVSTTDTDASITVSRYTSDLWDYAIGVPLCILGSLLAVKVRFPGGWMTGAFFTSAGLNASGAVHLVLPESIVLICMVAMGALIGCRFNEMTFREFVSVLSASVSAFAAAFSVSVAGAGFVSCMIDIPFGQALLAFAPGGLEVMTLMAFVLDLDPAFVAAHQIVRFTGMVLLLPAITLITIGRAPQSSDATGHTSVIAPSDKRLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAB8</accession>
    <name>A0A0M7AAB8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Colicin V secretion protein CvaA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">cvaA</name>
        <name evidence="8" type="ORF">LAX5112_03023</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72048.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672512.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03023"/>
    <dbReference type="EnsemblBacteria" id="CTQ72048">
        <property type="protein sequence ID" value="CTQ72048"/>
        <property type="gene ID" value="LAX5112_03023"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009306">
        <property type="term" value="P:protein secretion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006144">
        <property type="entry name" value="Secretion_HlyD_CS"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00543">
        <property type="entry name" value="HLYD_FAMILY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="33"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="6">
        <location>
            <begin position="128"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="6">
        <location>
            <begin position="219"/>
            <end position="271"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ72048.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="426" mass="47088" checksum="AC0166088295AE0C" modified="2015-12-09" version="1">MLVQKNRSRHSGEDMLFRKQAIEAKRTRLYGDVLIVTPVAFKVIAVFLFGILVAVGLFLGFGNFARLETVRGAVIPSNGMIHVRPASSGYITDFAAQEGEYVREGQELGRLVVADAATDDGSETAARLAAHERQISNLDDEIIKMNQLNRVKLDDLKVRTSDAQIALENIKNQIAIQETLVVELKGSYERASDLSARGHVSGETRDVRNIRLLTGKQDLQRLLSDQNDLEAELRKFGRARSELIAQNALDVARLEAQKEKLLAEKDIFKSQKVFKIVAPISGYVTTVLASRGAAVRSEHPLFSILPENSVLQVELYVPSRAIGFVEEGLAVRIQFDSFPFERFGAQAGTVRLVTRSVLSKNDPSVLVQTGEPIYRVNVDLAASEVSAYGRSYAIQPGMLLSANIILEDRSILSWLLEPMIAVARRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAK5</accession>
    <name>A0A0M7AAK5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Transcriptional activator protein CopR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">copR</name>
        <name evidence="6" type="ORF">LAX5112_02845</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71502.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672370.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02845"/>
    <dbReference type="EnsemblBacteria" id="CTQ71502">
        <property type="protein sequence ID" value="CTQ71502"/>
        <property type="gene ID" value="LAX5112_02845"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00383">
        <property type="entry name" value="trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001867">
        <property type="entry name" value="OmpR/PhoB-type_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016032">
        <property type="entry name" value="Sig_transdc_resp-reg_C-effctor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039420">
        <property type="entry name" value="WalR-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48111">
        <property type="entry name" value="PTHR48111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00486">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00862">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46894">
        <property type="entry name" value="SSF46894"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51755">
        <property type="entry name" value="OMPR_PHOB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="4">
        <location>
            <begin position="2"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="domain" description="OmpR/PhoB-type" evidence="5">
        <location>
            <begin position="129"/>
            <end position="227"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="OmpR/PhoB-type" evidence="3">
        <location>
            <begin position="129"/>
            <end position="227"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="2">
        <location>
            <position position="51"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ71502.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="227" mass="25528" checksum="2B381BDC95C01188" modified="2015-12-09" version="1">MRILLLEDDRQLGPWVAGGLREEGHVVDHFTDGKEALLAAMGQDYDVLILDRMVSGLDGLSVLKSLRASEDPTPALFLTALGEVDARVEGFDAGGDDYLTKPFAFAELSARVNALGRRRDSNGTSTTEPTTLRYGDLSLDLLARRCERQGQVIELMAKEFKLLEYFMRRPGRLVTRTMLLEQVWDMSFDPTTSVVETHISRLRSKVDKPFDDELIRTRRGEGYVFGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAU7</accession>
    <name>A0A0M7AAU7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02998</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71989.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672546.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ71989">
        <property type="protein sequence ID" value="CTQ71989"/>
        <property type="gene ID" value="LAX5112_02998"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809557" evidence="1">
        <location>
            <begin position="20"/>
            <end position="167"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71989.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="167" mass="17525" checksum="F467EC3A508EA8EC" modified="2015-12-09" version="1">MRLFTICGMALALSSPALADLDVRFDEGAPKDRFTISAAGGCDLGPMTVTIDLQPSPFGLIFDTTSSGAGVQVFQPFEITDGREHLTAIPSVKDGDNSIQLTVASLGKSQRISFTIDVDDTVQNREITVSDAEITGAKVVALQDGQRSEAVFGPNAVASVKMNACVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AB24</accession>
    <name>A0A0M7AB24_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">TspO/MBR family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_02937</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the TspO/BZRP family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71811.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008190755.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02937"/>
    <dbReference type="EnsemblBacteria" id="CTQ71811">
        <property type="protein sequence ID" value="CTQ71811"/>
        <property type="gene ID" value="LAX5112_02937"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd15904">
        <property type="entry name" value="TSPO_MBR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1260.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038330">
        <property type="entry name" value="TspO/MBR-related_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004307">
        <property type="entry name" value="TspO_MBR"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10057">
        <property type="entry name" value="PTHR10057"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03073">
        <property type="entry name" value="TspO_MBR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005859">
        <property type="entry name" value="PBR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="41"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="67"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="101"/>
            <end position="130"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007524"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ71811.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="148" mass="16549" checksum="394F08DECC4A3B71" modified="2015-12-09" version="1">MAIAVFIGVVFLAAASGAVFKPGPWYEELRKPSWTPPNWAFPVVWTLLYIMIAYAGWSVWSKVGWSLPIVFWALQIVLNAAWSWLFFGLRRMDLALVDVGLLWLVIAGFIVTAWPVSPLAALLFVPYLAWVTTAGLLNRSVQQLNPEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="31" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABS2</accession>
    <name>A0A0M7ABS2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein</fullName>
            <shortName evidence="11">DPOR subunit L</shortName>
            <shortName evidence="11">LI-POR subunit L</shortName>
            <ecNumber evidence="11">1.3.7.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">chlL</name>
        <name evidence="11" type="synonym">bchL</name>
        <name evidence="13" type="ORF">LAX5112_02948</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11">Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The L component serves as a unique electron donor to the NB-component of the complex, and binds Mg-ATP.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="11">
            <text>2 ADP + chlorophyllide a + oxidized 2[4Fe-4S]-[ferredoxin] + 2 phosphate = 2 ATP + 2 H2O + protochlorophyllide a + reduced 2[4Fe-4S]-[ferredoxin]</text>
            <dbReference type="Rhea" id="RHEA:28202"/>
            <dbReference type="Rhea" id="RHEA-COMP:10002"/>
            <dbReference type="Rhea" id="RHEA-COMP:10004"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33722"/>
            <dbReference type="ChEBI" id="CHEBI:33723"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:83348"/>
            <dbReference type="ChEBI" id="CHEBI:83350"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="1.3.7.7"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="11">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
        <text evidence="11">Binds 1 [4Fe-4S] cluster per dimer.</text>
    </comment>
    <comment type="pathway">
        <text evidence="11">Porphyrin-containing compound metabolism; bacteriochlorophyll biosynthesis (light-independent).</text>
    </comment>
    <comment type="subunit">
        <text evidence="11">Homodimer. Protochlorophyllide reductase is composed of three subunits; BchL, BchN and BchB.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 11 12">Belongs to the NifH/BchL/ChlL family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="1.3.7.7" evidence="11"/>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71846.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008189250.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02948"/>
    <dbReference type="EnsemblBacteria" id="CTQ71846">
        <property type="protein sequence ID" value="CTQ71846"/>
        <property type="gene ID" value="LAX5112_02948"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00671"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016730">
        <property type="term" value="F:oxidoreductase activity, acting on iron-sulfur proteins as donors"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016636">
        <property type="term" value="F:oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0036070">
        <property type="term" value="P:light-independent bacteriochlorophyll biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019685">
        <property type="term" value="P:photosynthesis, dark reaction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00355">
        <property type="entry name" value="ChlL_BchL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030655">
        <property type="entry name" value="NifH/chlL_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000392">
        <property type="entry name" value="NifH/frxC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005971">
        <property type="entry name" value="Protochlorophyllide_ATP-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42864">
        <property type="entry name" value="PTHR42864"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00142">
        <property type="entry name" value="Fer4_NifH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000363">
        <property type="entry name" value="Nitrogenase_iron"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01281">
        <property type="entry name" value="DPOR_bchL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00746">
        <property type="entry name" value="NIFH_FRXC_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00692">
        <property type="entry name" value="NIFH_FRXC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51026">
        <property type="entry name" value="NIFH_FRXC_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11 12" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="5 11 12" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="10 11" id="KW-0077">Bacteriochlorophyll biosynthesis</keyword>
    <keyword evidence="9 11" id="KW-0149">Chlorophyll biosynthesis</keyword>
    <keyword evidence="7 11 12" id="KW-0408">Iron</keyword>
    <keyword evidence="8 11 12" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="11" id="KW-0460">Magnesium</keyword>
    <keyword evidence="3 11 12" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4 11 12" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6 11 12" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2 11" id="KW-0602">Photosynthesis</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <feature type="binding site" evidence="11">
        <location>
            <begin position="53"/>
            <end position="58"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="57"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="82"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="138"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <note>ligand shared between dimeric partners</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="172"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <note>ligand shared between dimeric partners</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <begin position="223"/>
            <end position="224"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005504"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022531"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023181"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00355"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU003688"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="CTQ71846.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="309" mass="33763" checksum="52AC7E47CD87EAD0" modified="2015-12-09" version="1">MNIYTHPKTAAQEAKTAQKLRERADGDGSVQVHLDPTMEIDGAKVFAIYGKGGIGKSTTSSNLSVAFSKIGKRVLQIGCDPKHDSTFTLTKSLIPTVIDILEQVDFHTEELRPEDYMVEGFNGVQCIEAGGPPAGTGCGGYVVGQTVKLLKEHHLLDDTDVVIFDVLGDVVCGGFASPLQHAERAVVVAANDFDSIFAMNRIVAAIKAKAKNYEVRLGGVIANRSRETDQIDRYNDSVGLKRLAHVPDSDHVRLSRLKKSTLFEMGDSPEIAAIQNEYLQLAEQLWAGTEALQAEPMKDREIFEFLGFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AC25</accession>
    <name>A0A0M7AC25_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03088</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72181.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672574.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72181">
        <property type="protein sequence ID" value="CTQ72181"/>
        <property type="gene ID" value="LAX5112_03088"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022584">
        <property type="entry name" value="DUF2937"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11157">
        <property type="entry name" value="DUF2937"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="132"/>
            <end position="151"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72181.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="164" mass="17898" checksum="2A72CE7B3916948E" modified="2015-12-09" version="1">MLRIFTVLTMLAGGTLTSQLPEFAQQYRQRLGGAIDALEQVMADFRRDAADYGLTVPEAIDRQKASTDPFIQARGASIERTRQRLVHLKDQRSGFETASPFERILILVQSPDRELAQATAEDYAPAIPVTPVGLVSAGAGAAGGFILVWFLSGLVRLTRRRAPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADZ4</accession>
    <name>A0A0M7ADZ4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative amino-acid-binding protein YxeM</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yxeM_2</name>
        <name evidence="3" type="ORF">LAX5112_03326</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72837.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672744.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03326"/>
    <dbReference type="EnsemblBacteria" id="CTQ72837">
        <property type="protein sequence ID" value="CTQ72837"/>
        <property type="gene ID" value="LAX5112_03326"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00062">
        <property type="entry name" value="PBPb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="domain" description="PBPb" evidence="2">
        <location>
            <begin position="62"/>
            <end position="290"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00062"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ72837.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="306" mass="34142" checksum="3C840314A0331023" modified="2015-12-09" version="1">MPPAPYLQIFKSRFRFRFAGIHRSSLKKCGNCLCVLLLSLVFIAPVAPLSTAATQNALCSEPLRVRASGDYFPFSHKAPGGKLIGTDVELVRAVFDLIDCPIELEIMPFKRAIVELSQGNIDMVPFASITEHRSKFAHYSAPYRNELARLIFRKGEAETHPISEINDIIDHQLIVGHERASYRGMLFDNFMRSDAGQHHVFHTTTTTEGIRMLETGRIDALVEMPSAVMGVANRMGLEGAFEVHPFPVWEEPVHFMFSQQTVPVQLVDAVSAAIREVRRTEDYKVAFGHLALPIPNTGDPSAPLMD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AE96</accession>
    <name>A0A0M7AE96_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Recombination protein F</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03283</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72752.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672710.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03283"/>
    <dbReference type="EnsemblBacteria" id="CTQ72752">
        <property type="protein sequence ID" value="CTQ72752"/>
        <property type="gene ID" value="LAX5112_03283"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd01026">
        <property type="entry name" value="TOPRIM_OLD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041685">
        <property type="entry name" value="AAA_15"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034139">
        <property type="entry name" value="TOPRIM_OLD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13175">
        <property type="entry name" value="AAA_15"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA_15" evidence="2">
        <location>
            <begin position="1"/>
            <end position="417"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="540"/>
            <end position="565"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="540"/>
            <end position="560"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ72752.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="733" mass="82544" checksum="787B5746685176CC" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AE97</accession>
    <name>A0A0M7AE97_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03031</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72063.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672519.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03031"/>
    <dbReference type="EnsemblBacteria" id="CTQ72063">
        <property type="protein sequence ID" value="CTQ72063"/>
        <property type="gene ID" value="LAX5112_03031"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809439" evidence="2">
        <location>
            <begin position="27"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="110"/>
            <end position="152"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ72063.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="179" mass="19282" checksum="EF4A080400367B9C" modified="2015-12-09" version="1">MIRKSISAAFGIVVCLSVSVIGPAFAEEAVSEETVTAITDGTPERYSLVSVDGDVLRVDRQNGTVSVCKQKNEAWRCNPVPLAEEAYLAEINTLAGEVERLTARVEELEGAEANGQSQLPPGSALDRPATGTKPGDQTSGMTSEDEEELDRVLDFTETAMRRFFGMVRELQKDLDGSGN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEW3</accession>
    <name>A0A0M7AEW3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative phosphatase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03446</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73167.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672850.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03446"/>
    <dbReference type="EnsemblBacteria" id="CTQ73167">
        <property type="protein sequence ID" value="CTQ73167"/>
        <property type="gene ID" value="LAX5112_03446"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008557">
        <property type="entry name" value="PhoX"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006311">
        <property type="entry name" value="TAT_signal"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05787">
        <property type="entry name" value="DUF839"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="451"/>
            <end position="473"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73167.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="630" mass="68432" checksum="1BF18284E7B32DCD" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AF30</accession>
    <name>A0A0M7AF30_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03312</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72810.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672734.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03312"/>
    <dbReference type="EnsemblBacteria" id="CTQ72810">
        <property type="protein sequence ID" value="CTQ72810"/>
        <property type="gene ID" value="LAX5112_03312"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021233">
        <property type="entry name" value="DUF2783"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10932">
        <property type="entry name" value="DUF2783"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ72810.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="67" mass="7387" checksum="F6F72F70DB2213A4" modified="2015-12-09" version="1">MTAHITKAQLRHPDDFYADLLEAHEGLSKAESDAFNARLILLMANRIGDPGELKTLLEAAARTTHSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFI7</accession>
    <name>A0A0M7AFI7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03169</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72404.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451027.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03169"/>
    <dbReference type="EnsemblBacteria" id="CTQ72404">
        <property type="protein sequence ID" value="CTQ72404"/>
        <property type="gene ID" value="LAX5112_03169"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="15"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="47"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="136"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="195"/>
            <end position="214"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72404.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="329" mass="35378" checksum="5AC9DBE3550D672D" modified="2015-12-09" version="1">MAREFDPYSLSSPRAYLTFMIIFLVIVAFIAFILFPQVSTAFMSNPGLNGLIVFVGAFGVLLLFGRVIRLFPEIAWVNSFRIGDPALDTRSPVLLAPMAALLGNKSGDMALTPTIARSILDSIGMRLEESREISRYLTGLLVFLGLLGTFWGLLQTVSSVGATIQSLDVGSGDANVIFEDLKAGLEAPLSGMGTAFSSSLFGLTGSLILGFLDLQAGQAQNRFYNELEDWLSTVTDIDPEDGMFASGDSPGVEQIQASISALQKSVEEGGSKTASQAMANLAEGIQGLVKHVRSEQQMMRDWAESQGEQQKRIEGLLASISAAFDRAKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFT7</accession>
    <name>A0A0M7AFT7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Phage Tail Collar Domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03495</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73302.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008196547.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03495"/>
    <dbReference type="EnsemblBacteria" id="CTQ73302">
        <property type="protein sequence ID" value="CTQ73302"/>
        <property type="gene ID" value="LAX5112_03495"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1340.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011083">
        <property type="entry name" value="Phage_tail_collar_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037053">
        <property type="entry name" value="Phage_tail_collar_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07484">
        <property type="entry name" value="Collar"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Collar" evidence="1">
        <location>
            <begin position="7"/>
            <end position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07484"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73302.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="205" mass="21036" checksum="8D949A9086C61C7E" modified="2015-12-09" version="1">MEDQYIGMLACLGFTFAPRNFGFCAGGLVAISQNNALFSLIGTIYGGDGRTTFGLPDLRGRAAISQGRFPGSQFNWIAGQKISQETHTLSILEMPSHDHAASLAGTSVASSTDVEVSTTQGTLSVPSSGDYIGAGPPFGAAQPAYVPSGSEGTTVPLGGVSTNSALVGGSVTIGRTGGSQSFSIMQPVQALNWCICLFGLYPSRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGN5</accession>
    <name>A0A0M7AGN5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">HTH cro/C1-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03289</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72764.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672715.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72764">
        <property type="protein sequence ID" value="CTQ72764"/>
        <property type="gene ID" value="LAX5112_03289"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01381">
        <property type="entry name" value="HTH_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="1">
        <location>
            <begin position="9"/>
            <end position="54"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01381"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72764.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="81" mass="9165" checksum="683BB2D5080753FB" modified="2015-12-09" version="1">MINAKQCRATRAWLSWSQDELAKRSLVSKRAIAGFELEKTVPHDRTLRDLQRAFEDAGITFLMDGARGIGLQEHEGKFGFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHB3</accession>
    <name>A0A0M7AHB3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Ribitol 2-dehydrogenase</fullName>
            <ecNumber evidence="2">1.1.1.56</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">rbtD</name>
        <name evidence="2" type="ORF">LAX5112_03736</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the short-chain dehydrogenases/reductases (SDR) family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.56" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74037.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03736"/>
    <dbReference type="EnsemblBacteria" id="CTQ74037">
        <property type="protein sequence ID" value="CTQ74037"/>
        <property type="gene ID" value="LAX5112_03736"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050255">
        <property type="term" value="F:ribitol 2-dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00106">
        <property type="entry name" value="adh_short"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU000363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74037.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="302" mass="33709" checksum="60C768EDE1F93F5A" modified="2015-12-09" version="1">MTSPLGFLGSACMNDQNSSYPQHRSILMTGCSSGIGETSARLLRGRNWRVFATARKLEDVQRLKDEGFESFQLDYEDPDSIRVTADAVLEATNGELDAIFNNGAYAIPGALEDLPTDGLRALFEANFIGWHDLTRQFIPAMRAQKSGRIVQCSSVLGFVALKYRGAYTASKFALEAYTDTLRQELAGTGIHVSLIEPGPIDTRFTQNTIANFDRWIGEEGSKQSVHRETYEKRRIRMEAGEPGPFKLPPSAVTKPLIHALESHRPRARYRVTIPTKVMAIAKRLLPTRILDRFCIWAADGEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHV8</accession>
    <name>A0A0M7AHV8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">p-hydroxybenzoate hydroxylase</fullName>
            <ecNumber evidence="2">1.14.13.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">pobA</name>
        <name evidence="2" type="ORF">LAX5112_03951</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.14.13.2" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74725.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673252.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03951"/>
    <dbReference type="EnsemblBacteria" id="CTQ74725">
        <property type="protein sequence ID" value="CTQ74725"/>
        <property type="gene ID" value="LAX5112_03951"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018659">
        <property type="term" value="F:4-hydroxybenzoate 3-monooxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071949">
        <property type="term" value="F:FAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043639">
        <property type="term" value="P:benzoate catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002938">
        <property type="entry name" value="FAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012733">
        <property type="entry name" value="HB_mOase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01494">
        <property type="entry name" value="FAD_binding_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02360">
        <property type="entry name" value="pbenz_hydroxyl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FAD_binding_3" evidence="1">
        <location>
            <begin position="2"/>
            <end position="342"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01494"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74725.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="389" mass="43957" checksum="65CC9F9712236A30" modified="2015-12-09" version="1">MRTQVVIVGGGPSGLLLGQLLHLKGIDAVVLERKTKDYVLARIRAGILETGLVELMREAGVSERMDKERFVHTGTCISYENEMFSINFENLIGKSVIVYGQTEVTRDLYEAREASGAKTIFEAEGVAIHDADTDAPYVTYMKDGSEHRIDCDFVAGCDGFHGVSRKTIPDTVRKDYEKIFPFGWLGILSETPPVHEELIYANSARGFALCSMRNENLSRYYVQCELSDKVEDWSDEAFWEELKRRLPEDIAEKLVTGPSIEKSIAPLRSFVSEPMRWGRLFLCGDAAHIVPPTGAKGLNTAASDVHYLYRALSAYYLDKDSTGIDTYSETALARVWKAERFSWATTNLLHRFPDQSEFDLKMQRAEIESLHYNPTAQKWFAENYVGLPY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHZ1</accession>
    <name>A0A0M7AHZ1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="13">NADP-dependent malic enzyme</fullName>
            <ecNumber evidence="13">1.1.1.40</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">tme</name>
        <name evidence="13" type="ORF">LAX5112_03798</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="4">In the C-terminal section; belongs to the phosphate acetyltransferase and butyryltransferase family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">In the N-terminal section; belongs to the malic enzymes family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.40" evidence="13"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74211.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673111.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03798"/>
    <dbReference type="EnsemblBacteria" id="CTQ74211">
        <property type="protein sequence ID" value="CTQ74211"/>
        <property type="gene ID" value="LAX5112_03798"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016746">
        <property type="term" value="F:acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004471">
        <property type="term" value="F:malate dehydrogenase (decarboxylating) (NAD+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004473">
        <property type="term" value="F:malate dehydrogenase (decarboxylating) (NADP+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008948">
        <property type="term" value="F:oxaloacetate decarboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006108">
        <property type="term" value="P:malate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd05311">
        <property type="entry name" value="NAD_bind_2_malic_enz"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10380">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10750">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10950">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046346">
        <property type="entry name" value="Aminiacid_DH-like_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015884">
        <property type="entry name" value="Malic_enzyme_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012301">
        <property type="entry name" value="Malic_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037062">
        <property type="entry name" value="Malic_N_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012302">
        <property type="entry name" value="Malic_NAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045213">
        <property type="entry name" value="Malic_NAD-bd_bact_type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012188">
        <property type="entry name" value="ME_PTA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042113">
        <property type="entry name" value="P_AcTrfase_dom1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042112">
        <property type="entry name" value="P_AcTrfase_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002505">
        <property type="entry name" value="PTA_PTB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00390">
        <property type="entry name" value="malic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03949">
        <property type="entry name" value="Malic_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01515">
        <property type="entry name" value="PTA_PTB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF036684">
        <property type="entry name" value="ME_PTA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01274">
        <property type="entry name" value="malic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00919">
        <property type="entry name" value="Malic_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53223">
        <property type="entry name" value="SSF53223"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00331">
        <property type="entry name" value="MALIC_ENZYMES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-0511">Multifunctional enzyme</keyword>
    <keyword evidence="10" id="KW-0521">NADP</keyword>
    <keyword evidence="6 13" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="malic" evidence="12">
        <location>
            <begin position="28"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="domain" description="Malic_M" evidence="11">
        <location>
            <begin position="173"/>
            <end position="410"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="8">
        <location>
            <position position="104"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <begin position="86"/>
            <end position="93"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="146"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="147"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="172"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="297"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007686"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00008756"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023268"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR036684-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR036684-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR036684-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="SMART" id="SM00919"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="SMART" id="SM01274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="CTQ74211.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="760" mass="82439" checksum="8D3EA39A9B2E2DD4" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AI94</accession>
    <name>A0A0M7AI94_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="9 11">Trigger factor</fullName>
            <shortName evidence="9">TF</shortName>
            <ecNumber evidence="9">5.2.1.8</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">PPIase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9 14" type="primary">tig</name>
        <name evidence="14" type="ORF">LAX5112_03503</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8 9">Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 9 10">
            <text>[protein]-peptidylproline (omega=180) = [protein]-peptidylproline (omega=0)</text>
            <dbReference type="Rhea" id="RHEA:16237"/>
            <dbReference type="Rhea" id="RHEA-COMP:10747"/>
            <dbReference type="Rhea" id="RHEA-COMP:10748"/>
            <dbReference type="ChEBI" id="CHEBI:83833"/>
            <dbReference type="ChEBI" id="CHEBI:83834"/>
            <dbReference type="EC" id="5.2.1.8"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cytoplasm</location>
        </subcellularLocation>
        <text evidence="9">About half TF is bound to the ribosome near the polypeptide exit tunnel while the other half is free in the cytoplasm.</text>
    </comment>
    <comment type="domain">
        <text evidence="9">Consists of 3 domains; the N-terminus binds the ribosome, the middle domain has PPIase activity, while the C-terminus has intrinsic chaperone activity on its own.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 9 11">Belongs to the FKBP-type PPIase family. Tig subfamily.</text>
    </comment>
    <dbReference type="EC" id="5.2.1.8" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73324.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672919.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03503"/>
    <dbReference type="EnsemblBacteria" id="CTQ73324">
        <property type="protein sequence ID" value="CTQ73324"/>
        <property type="gene ID" value="LAX5112_03503"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003755">
        <property type="term" value="F:peptidyl-prolyl cis-trans isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007049">
        <property type="term" value="P:cell cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006457">
        <property type="term" value="P:protein folding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015031">
        <property type="term" value="P:protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.50.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1050">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00303">
        <property type="entry name" value="Trigger_factor_Tig"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046357">
        <property type="entry name" value="PPIase_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001179">
        <property type="entry name" value="PPIase_FKBP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005215">
        <property type="entry name" value="Trig_fac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008880">
        <property type="entry name" value="Trigger_fac_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037041">
        <property type="entry name" value="Trigger_fac_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008881">
        <property type="entry name" value="Trigger_fac_ribosome-bd_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036611">
        <property type="entry name" value="Trigger_fac_ribosome-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027304">
        <property type="entry name" value="Trigger_fact/SurA_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30560">
        <property type="entry name" value="PTHR30560"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00254">
        <property type="entry name" value="FKBP_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05698">
        <property type="entry name" value="Trigger_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05697">
        <property type="entry name" value="Trigger_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF003095">
        <property type="entry name" value="Trigger_factor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF102735">
        <property type="entry name" value="SSF102735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF109998">
        <property type="entry name" value="SSF109998"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00115">
        <property type="entry name" value="tig"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50059">
        <property type="entry name" value="FKBP_PPIASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 9 11" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="3 9 11" id="KW-0132">Cell division</keyword>
    <keyword evidence="5 9 11" id="KW-0143">Chaperone</keyword>
    <keyword evidence="12" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 9 10" id="KW-0413">Isomerase</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 9 10" id="KW-0697">Rotamase</keyword>
    <feature type="domain" description="PPIase FKBP-type" evidence="13">
        <location>
            <begin position="167"/>
            <end position="227"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="12">
        <location>
            <begin position="326"/>
            <end position="353"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000971"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00024849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00303"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU003914"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS50059"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="CTQ73324.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="449" mass="50513" checksum="78E638711EF17B56" modified="2015-12-09" version="1">MQVTETLAEGLKRELKIDIPAGDLAVKLDDYLNDMKSKANIKGFRPGKVPVAHLKKMYGRQAMAEILSNTIQETTQKAVEERSERPALTPEIDLPEEDAEKILAGDADLSFKMTYDVLPNFEIVDFGGFEIERPVVEIAEEEVDTQVSDIAKNNTPFEAKDGAAEDGDRVTMSYLGKIDGEPFEGGADENGQLVLGSGQFIPGFEEQLTGTKAGDEKVVEVTFPEEYPAAHLAGKAATFDVVVKEIGAPGEAAIDDEFAKGLGLESLDKLKEIVRGQIEGQFGQMTRQRVKRQLLDKLDEHYSFELPEKLLESEFQIVWQQVEEDMKRNEKTFEDEETTEEEAKAEYRKIAERRVRLGLVLSEIGEKNNIQVTDEEMQRALYDRVRQFPGQEQQVFEFYKNNQQALASLRAPIYEEKVVDFMLELAKVTDKTVTKEELENLVAEDEDAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIF5</accession>
    <name>A0A0M7AIF5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 6">DNA repair protein RadA</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">lon2_2</name>
        <name evidence="5" type="synonym">radA</name>
        <name evidence="8" type="ORF">LAX5112_03860</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.</text>
    </comment>
    <comment type="function">
        <text evidence="5">Plays a role in repairing double-strand DNA breaks, probably involving stabilizing or processing branched DNA or blocked replication forks.</text>
    </comment>
    <comment type="domain">
        <text evidence="5">The middle region has homology to RecA with ATPase motifs including the RadA KNRFG motif, while the C-terminus is homologous to Lon protease.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5 6">Belongs to the RecA family. RadA subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74427.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673170.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03860"/>
    <dbReference type="EnsemblBacteria" id="CTQ74427">
        <property type="protein sequence ID" value="CTQ74427"/>
        <property type="gene ID" value="LAX5112_03860"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140664">
        <property type="term" value="F:ATP-dependent DNA damage sensor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003684">
        <property type="term" value="F:damaged DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008233">
        <property type="term" value="F:peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000725">
        <property type="term" value="P:recombinational repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01498">
        <property type="entry name" value="RadA_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004504">
        <property type="entry name" value="DNA_repair_RadA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020588">
        <property type="entry name" value="RecA_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014721">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold_subgr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041166">
        <property type="entry name" value="Rubredoxin_2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18073">
        <property type="entry name" value="Rubredoxin_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="SSF54211"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00416">
        <property type="entry name" value="sms"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50162">
        <property type="entry name" value="RECA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 6" id="KW-0227">DNA damage</keyword>
    <keyword evidence="5 6" id="KW-0234">DNA repair</keyword>
    <keyword evidence="5 6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="3 8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1 5 6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-0645">Protease</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0346">Stress response</keyword>
    <keyword evidence="6" id="KW-0862">Zinc</keyword>
    <keyword evidence="2 6" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="RECA_2" evidence="7">
        <location>
            <begin position="68"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="region of interest" description="Lon-protease-like" evidence="5">
        <location>
            <begin position="354"/>
            <end position="464"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="RadA KNRFG motif" evidence="5">
        <location>
            <begin position="255"/>
            <end position="259"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="97"/>
            <end position="104"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01498"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50162"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ74427.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="464" mass="48245" checksum="96400EA9333AF31B" modified="2015-12-09" version="1">MARRSTSFVCQSCGAVTAKWVGRCESCGEWNTIVEEQTGGGIGGGPSRASKSKGRVVPLVGLTGDTKEAPRIQTKVAELDRVTGGGFVRGSALLVGGDPGIGKSTLLIQAAAQLASLGHKTVYISGEEAIGQVRLRAERLGLAEAPVALAAETSVEDILATLEADKAPAMLILDSVQTLWTDQADSPPGTVTQVRASAQAMVRYAKKNGTTLVLVGHVTKDGQIAGPRVVEHMVDAVLYFEGDGAHQYRILRSVKNRFGATDEIGVFEMTGKGLQEVPNPSALFLGDRNTTAPGAAVFAGLEGSRPLLIEIQALVAQSSLGTPRRAVIGWDTARLSMILAVLEARCGVRFSQHDVYLNVAGGLKINEPGADLAVAAALVSSLSGLALPANCVYFGEVSLSGAIRPVAQAQSRLKEAEKLGFDQAYCPEGNLKDGAATPFKATGLPELGDFIAKLTAETGAQGAT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIL0</accession>
    <name>A0A0M7AIL0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03744</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74060.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673069.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74060">
        <property type="protein sequence ID" value="CTQ74060"/>
        <property type="gene ID" value="LAX5112_03744"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809678" evidence="2">
        <location>
            <begin position="21"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="36"/>
            <end position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ74060.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="67" mass="7237" checksum="476F54AB7A56D25E" modified="2015-12-09" version="1">MTRIFATASALALSTGSALAHPSIQEHAHPHTDAASYFTVETLIIFAVGLSIGATLAWMKRRKDLDR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIS6</accession>
    <name>A0A0M7AIS6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Flagellar basal body rod protein FlgB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_04101</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the flagella basal body rod proteins family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ75055.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451983.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04101"/>
    <dbReference type="EnsemblBacteria" id="CTQ75055">
        <property type="protein sequence ID" value="CTQ75055"/>
        <property type="gene ID" value="LAX5112_04101"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009288">
        <property type="term" value="C:bacterial-type flagellum"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001444">
        <property type="entry name" value="Flag_bb_rod_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00460">
        <property type="entry name" value="Flg_bb_rod"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0975">Bacterial flagellum</keyword>
    <keyword evidence="4" id="KW-0966">Cell projection</keyword>
    <keyword evidence="4" id="KW-0969">Cilium</keyword>
    <keyword evidence="4" id="KW-0282">Flagellum</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Flg_bb_rod" evidence="3">
        <location>
            <begin position="18"/>
            <end position="36"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009677"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023143"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00460"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ75055.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="126" mass="13619" checksum="FC3CE3B2D631C2A8" modified="2015-12-09" version="1">MEPVFLNKLVSQNNEWLSVRQAAIAENIANANTPGFGAKDVEPFVSVISKTHLAMTATHGSHLGQTMEAAKASDMEKADSWNVTHSGNSVSLEQELMKAGEVARDHSLNASIAKSFHKMYLAAVRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJ28</accession>
    <name>A0A0M7AJ28_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Beta-ketothiolase BktB</fullName>
            <ecNumber evidence="7">2.3.1.16</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">bktB</name>
        <name evidence="7" type="ORF">LAX5112_03910</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the thiolase-like superfamily. Thiolase family.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.16" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74581.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673212.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03910"/>
    <dbReference type="EnsemblBacteria" id="CTQ74581">
        <property type="protein sequence ID" value="CTQ74581"/>
        <property type="gene ID" value="LAX5112_03910"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003988">
        <property type="term" value="F:acetyl-CoA C-acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd00751">
        <property type="entry name" value="thiolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.47.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002155">
        <property type="entry name" value="Thiolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016039">
        <property type="entry name" value="Thiolase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020615">
        <property type="entry name" value="Thiolase_acyl_enz_int_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020610">
        <property type="entry name" value="Thiolase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020617">
        <property type="entry name" value="Thiolase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020613">
        <property type="entry name" value="Thiolase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020616">
        <property type="entry name" value="Thiolase_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02803">
        <property type="entry name" value="Thiolase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00108">
        <property type="entry name" value="Thiolase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000429">
        <property type="entry name" value="Ac-CoA_Ac_transf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53901">
        <property type="entry name" value="SSF53901"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01930">
        <property type="entry name" value="AcCoA-C-Actrans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00098">
        <property type="entry name" value="THIOLASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00737">
        <property type="entry name" value="THIOLASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00099">
        <property type="entry name" value="THIOLASE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4 7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Thiolase_N" evidence="5">
        <location>
            <begin position="4"/>
            <end position="261"/>
        </location>
    </feature>
    <feature type="domain" description="Thiolase_C" evidence="6">
        <location>
            <begin position="270"/>
            <end position="390"/>
        </location>
    </feature>
    <feature type="active site" description="Acyl-thioester intermediate" evidence="3">
        <location>
            <position position="89"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="3">
        <location>
            <position position="348"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="3">
        <location>
            <position position="378"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR000429-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003557"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00108"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF02803"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ74581.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="393" mass="40673" checksum="0E3D030D4DB62B42" modified="2015-12-09" version="1">MKDIVITSAARTAVGSFGGSLKDMAPIDLGTVAAKAAIERAGIQANQVEQAFFGNVIHTEPRDMYISRVASRQAGVPDHAPALTMNRLCGSGLQAIVSSVQAISMGDGDVTLAGGAESMSRSGYLMPAARWGQKMGDTTAHDMMTGALHDPFGIGHMGVTAENVAEQNNISRERQDAFALESHRRASEAIRNGHFKDQVIPLTVGRRGKETVFDTDEHVRHDAKIEDIAKLRPVFKKDGLVTAGNASGLNDGAAAITLMTSEKASELGTTPLVKIRAYGVAGVDPAVMGIGPVPAMQIAMKRAGITAADLDVVESNEAFAAQACAVNDLLGLPGEKVNPNGGAIALGHPIGATGAIIMTKLIYELKRTGGSLGAATMCIGGGQGIAIIVENAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJG3</accession>
    <name>A0A0M7AJG3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Ribonuclease D</fullName>
            <ecNumber evidence="3">3.1.13.5</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">rnd_1</name>
        <name evidence="3" type="ORF">LAX5112_03638</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.13.5" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73724.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673016.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03638"/>
    <dbReference type="EnsemblBacteria" id="CTQ73724">
        <property type="protein sequence ID" value="CTQ73724"/>
        <property type="gene ID" value="LAX5112_03638"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008408">
        <property type="term" value="F:3'-5' exonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033890">
        <property type="term" value="F:ribonuclease D activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002562">
        <property type="entry name" value="3'-5'_exonuclease_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01612">
        <property type="entry name" value="DNA_pol_A_exo1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00474">
        <property type="entry name" value="35EXOc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0269">Exonuclease</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0540">Nuclease</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="3'-5' exonuclease" evidence="2">
        <location>
            <begin position="1"/>
            <end position="171"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022839"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00474"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ73724.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="206" mass="22986" checksum="60EF4C7253322B08" modified="2015-12-09" version="1">MTIRYHKGDLPDLSAYETASAVAVDSETLGLNPHRDRLCVVQLSPGDGSADVVQIARGQTEAPNLAALFTDTAKPKIFHFARFDVAVLRHYLGIHVTPVWCTKIASKLVRTYTDRHGLKDITRELLGVELSKQQQSSDWAAETLSDAQLAYAASDVLHLHDLKAKLEMMLEREERTNIAEACFSFLPVRAELDLKGWEENDIFAHS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJP5</accession>
    <name>A0A0M7AJP5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Phosphoserine phosphatase RsbU</fullName>
            <ecNumber evidence="3">3.1.3.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">rsbU_4</name>
        <name evidence="3" type="ORF">LAX5112_03663</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.3.3" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73804.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03663"/>
    <dbReference type="EnsemblBacteria" id="CTQ73804">
        <property type="protein sequence ID" value="CTQ73804"/>
        <property type="gene ID" value="LAX5112_03663"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0036424">
        <property type="term" value="F:L-phosphoserine phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004722">
        <property type="term" value="F:protein serine/threonine phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021796">
        <property type="entry name" value="DUF3365"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036457">
        <property type="entry name" value="PPM-type_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001932">
        <property type="entry name" value="PPM-type_phosphatase_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11845">
        <property type="entry name" value="DUF3365"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07228">
        <property type="entry name" value="SpoIIE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00331">
        <property type="entry name" value="PP2C_SIG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="21"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="domain" description="PPM-type phosphatase" evidence="2">
        <location>
            <begin position="299"/>
            <end position="519"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00331"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ73804.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="520" mass="57879" checksum="36617F8D67B625D1" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJX2</accession>
    <name>A0A0M7AJX2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Degradation activator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">degA_4</name>
        <name evidence="2" type="ORF">LAX5112_03680</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ73884.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03680"/>
    <dbReference type="EnsemblBacteria" id="CTQ73884">
        <property type="protein sequence ID" value="CTQ73884"/>
        <property type="gene ID" value="LAX5112_03680"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046335">
        <property type="entry name" value="LacI/GalR-like_sensor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13377">
        <property type="entry name" value="Peripla_BP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peripla_BP_3" evidence="1">
        <location>
            <begin position="117"/>
            <end position="279"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13377"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73884.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="286" mass="31051" checksum="87259B81A77D8173" modified="2015-12-09" version="1">MTDLAAEAQQSARGVVIGLIVPDITNPFFAQLAKSIEMEVASRGGMVMLANSHDDPGIELKQVRAMHEWPVTGIIVVAGSDASRSYSAELPIISLDRRYGTYPLVATDQRDGARKVVDHLHGLGHRIIAYIAGPENLEVARERRDGFIERVNELSTPDDEIDLTVHAGEFDFASGEAIARNILLQLRRGFRITAIATASDQQAIGVLRCARDLGVHVPQDVSVIGFDDITLASLVVPRLTTLRQPIEDIASVAVDRIVAKIEAPSDHAVRGSLIVRESTAPASRWD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AK53</accession>
    <name>A0A0M7AK53_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03920</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74610.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673221.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03920"/>
    <dbReference type="EnsemblBacteria" id="CTQ74610">
        <property type="protein sequence ID" value="CTQ74610"/>
        <property type="gene ID" value="LAX5112_03920"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809414" evidence="1">
        <location>
            <begin position="29"/>
            <end position="389"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74610.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="389" mass="40576" checksum="A54C4A155008B384" modified="2015-12-09" version="1">MISKKSRIGLGLSTAVGLFLAQAAPALAFDPSGVPVADAFLKLLDSDSSDVESYGSVNDTGGNVTIADLVLKSEEDDSTVTIGTTTLSGGSVLDNGRLKLSGLQLQDLELAADDGGLTMANMTATDLVLPAAEEVQNGAPTVDPSYKTFEASTIQINDEDGKIATIDTITSSIDEMDGDQPTSGKFAISNIVVDVKEIQAEEAKSLQELGYETLNMNVSGSGKWDPDAATINIPDLKIDGQDAAALSLSLSLGGVTREVVEELNKASDNPEESMALLQNISVSNVRIRLDDASLTGRVLDQEAQKAGVDTQQYVAGLTGSLPLMLGMLQNKELEGQVAEAVTLYLTNPGSLEITASPENPVPFAQIMGAAMMAPQMVPQLLGVSITANQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKC0</accession>
    <name>A0A0M7AKC0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Acyl-CoA thioesterase 2</fullName>
            <ecNumber evidence="3">3.1.2.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">tesB</name>
        <name evidence="3" type="ORF">LAX5112_03738</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the C/M/P thioester hydrolase family.</text>
    </comment>
    <dbReference type="EC" id="3.1.2.-" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74044.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673066.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03738"/>
    <dbReference type="EnsemblBacteria" id="CTQ74044">
        <property type="protein sequence ID" value="CTQ74044"/>
        <property type="gene ID" value="LAX5112_03738"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047617">
        <property type="term" value="F:acyl-CoA hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006637">
        <property type="term" value="P:acyl-CoA metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.160.210">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042171">
        <property type="entry name" value="Acyl-CoA_hotdog"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003703">
        <property type="entry name" value="Acyl_CoA_thio"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029069">
        <property type="entry name" value="HotDog_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11066">
        <property type="entry name" value="PTHR11066"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54637">
        <property type="entry name" value="SSF54637"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00189">
        <property type="entry name" value="tesB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006538"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ74044.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="290" mass="33021" checksum="290CC8BA3CF408BF" modified="2015-12-09" version="1">MNTAIDNLLHILDLEPLEHNLFRGRSPQVGWQRVFGGQVIGQALVAASRTVIEDRHVHSLHGYFLRPGDPSVPIIYEVDRIRDGGSFTTRRVVAIQHGHAIFSMSASFQVREEGLEYQADMPDVPGPDNLPSEQELKEKFLEFAPENVKRYWERERPIEMRPVDMTHYFSKKPLPAQQYVWVRASDPLPDDERIHQCVLAYASDMTLLDTSLFPHGTSVFSPKIQAASLDHAMWFHHPFRADEWLLYATDSTSSSGSRGMNRGLLYTQDGKLIASTAQEGLIRLRKKEAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKF7</accession>
    <name>A0A0M7AKF7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 5">Basal-body rod modification protein FlgD</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">flgD</name>
        <name evidence="9" type="ORF">LAX5112_04206</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4 5">Required for flagellar hook formation. May act as a scaffolding protein.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the FlgD family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75369.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04206"/>
    <dbReference type="EnsemblBacteria" id="CTQ75369">
        <property type="protein sequence ID" value="CTQ75369"/>
        <property type="gene ID" value="LAX5112_04206"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044781">
        <property type="term" value="P:bacterial-type flagellum organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005648">
        <property type="entry name" value="FlgD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025965">
        <property type="entry name" value="FlgD_Ig"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025963">
        <property type="entry name" value="FLgD_Tudor"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03963">
        <property type="entry name" value="FlgD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13860">
        <property type="entry name" value="FlgD_ig"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13861">
        <property type="entry name" value="FLgD_tudor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-1005">Bacterial flagellum biogenesis</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FLgD_tudor" evidence="8">
        <location>
            <begin position="95"/>
            <end position="226"/>
        </location>
    </feature>
    <feature type="domain" description="FlgD_ig" evidence="7">
        <location>
            <begin position="120"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010577"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00016013"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022795"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00024746"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU362076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF13860"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF13861"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ75369.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="231" mass="24084" checksum="5D6415453D046A1E" modified="2015-12-09" version="1">MTFFSPSASSTNSTSSTSGAAQSSSQSSTQASEAGLSANYELFLSMLTTQIQNQDPLDPLDSAEYTNQLVQYSNVEQSIQTNNNLEEMISLLSSNQSSAYVNYIGTEVTAAGGTAMFDNGQASWKYDVLEDATGTVEILNDAGQTVYSGEIQLKAGGGTYTWDGTTDLGGTASKGAYTIQLDVKDSAGTAEPASIEVSGVVDEVNFGGAVPFLRIGEISVPVSAVKSVRSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="33" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKK2</accession>
    <name>A0A0M7AKK2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">GMP synthase [glutamine-hydrolyzing]</fullName>
            <ecNumber evidence="9">6.3.5.2</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">GMP synthetase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="9">Glutamine amidotransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="12" type="primary">guaA_2</name>
        <name evidence="9" type="synonym">guaA</name>
        <name evidence="12" type="ORF">LAX5112_04045</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 9">Catalyzes the synthesis of GMP from XMP.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>ATP + H2O + L-glutamine + XMP = AMP + diphosphate + GMP + 2 H(+) + L-glutamate</text>
            <dbReference type="Rhea" id="RHEA:11680"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57464"/>
            <dbReference type="ChEBI" id="CHEBI:58115"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.3.5.2"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 9">Purine metabolism; GMP biosynthesis; GMP from XMP (L-Gln route): step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="9">Homodimer.</text>
    </comment>
    <dbReference type="EC" id="6.3.5.2" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ74936.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673334.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04045"/>
    <dbReference type="EnsemblBacteria" id="CTQ74936">
        <property type="protein sequence ID" value="CTQ74936"/>
        <property type="gene ID" value="LAX5112_04045"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00189">
        <property type="reaction ID" value="UER00296"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003922">
        <property type="term" value="F:GMP synthase (glutamine-hydrolyzing) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016462">
        <property type="term" value="F:pyrophosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006541">
        <property type="term" value="P:glutamine metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01742">
        <property type="entry name" value="GATase1_GMP_Synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01997">
        <property type="entry name" value="GMP_synthase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00344">
        <property type="entry name" value="GMP_synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017926">
        <property type="entry name" value="GATASE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001674">
        <property type="entry name" value="GMP_synth_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004739">
        <property type="entry name" value="GMP_synth_GATase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022955">
        <property type="entry name" value="GMP_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025777">
        <property type="entry name" value="GMPS_ATP_PPase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022310">
        <property type="entry name" value="NAD/GMP_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00117">
        <property type="entry name" value="GATase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00958">
        <property type="entry name" value="GMP_synt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02540">
        <property type="entry name" value="NAD_synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="SSF52317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00884">
        <property type="entry name" value="guaA_Cterm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00888">
        <property type="entry name" value="guaA_Nterm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51553">
        <property type="entry name" value="GMPS_ATP_PPASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 9 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8 9" id="KW-0315">Glutamine amidotransferase</keyword>
    <keyword evidence="5 9 10" id="KW-0332">GMP biosynthesis</keyword>
    <keyword evidence="3 9 12" id="KW-0436">Ligase</keyword>
    <keyword evidence="4 9 10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6 9 10" id="KW-0658">Purine biosynthesis</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GMPS ATP-PPase" evidence="11">
        <location>
            <begin position="207"/>
            <end position="399"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="9">
        <location>
            <position position="85"/>
        </location>
    </feature>
    <feature type="active site" evidence="9">
        <location>
            <position position="181"/>
        </location>
    </feature>
    <feature type="active site" evidence="9">
        <location>
            <position position="183"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <begin position="234"/>
            <end position="240"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002332"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005153"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022749"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00344"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00886"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS51553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ74936.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="524" mass="57670" checksum="3E5B86B29FF47953" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKX4</accession>
    <name>A0A0M7AKX4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase</fullName>
            <ecNumber evidence="2">2.5.1.145</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2 3" type="primary">lgt</name>
        <name evidence="3" type="ORF">LAX5112_04144</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>1,2-diacyl-sn-glycero-3-phospho-(1'-sn-glycerol) + L-cysteinyl-[prolipoprotein] = H(+) + S-1,2-diacyl-sn-glyceryl-L-cysteinyl-[prolipoprotein] + sn-glycerol 1-phosphate</text>
            <dbReference type="Rhea" id="RHEA:56712"/>
            <dbReference type="Rhea" id="RHEA-COMP:14679"/>
            <dbReference type="Rhea" id="RHEA-COMP:14680"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:57685"/>
            <dbReference type="ChEBI" id="CHEBI:64716"/>
            <dbReference type="ChEBI" id="CHEBI:140658"/>
            <dbReference type="EC" id="2.5.1.145"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Protein modification; lipoprotein biosynthesis (diacylglyceryl transfer).</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the Lgt family.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.145" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75201.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04144"/>
    <dbReference type="EnsemblBacteria" id="CTQ75201">
        <property type="protein sequence ID" value="CTQ75201"/>
        <property type="gene ID" value="LAX5112_04144"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00664"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008961">
        <property type="term" value="F:phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042158">
        <property type="term" value="P:lipoprotein biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01147">
        <property type="entry name" value="Lgt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001640">
        <property type="entry name" value="Lgt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30589">
        <property type="entry name" value="PTHR30589"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01790">
        <property type="entry name" value="LGT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00544">
        <property type="entry name" value="lgt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01311">
        <property type="entry name" value="LGT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="3" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="3" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0808">Transferase</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="46"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="86"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="118"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="150"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="233"/>
            <end position="252"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="264"/>
            <end position="288"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="169"/>
        </location>
        <ligand>
            <name>1,2-diacyl-sn-glycero-3-phospho-(1'-sn-glycerol)</name>
            <dbReference type="ChEBI" id="CHEBI:64716"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007150"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01147"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ75201.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="297" mass="32739" checksum="1EE6FD4B928C01B6" modified="2015-12-09" version="1">MRDRACVAHIGIYSETEGPSLPPLLAIPFPAIDPVIVEIGPFALRWYALAYIVGIVLAWRYMRALVLNDTLWGPRNRPTPVDLDDFVLWGTLGIILGGRLGYVLFYNPAYYLANPGEILAIWSGGMSFHGGFAGTVIAMMLFAWKRGLSLWTLFDLAGCAAPIGIFFGRMANFINSELWGRPTDVPWAVVFPNAGPEPRHPSQLYEAALEGVILFLVLRLLSHRFKLLQRPGFLAGAFACGYGVGRSIVELYRVPDAHIGYLNGFLTMGMLLSLPMILAGIALMVWSVKRTPRAADQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AL10</accession>
    <name>A0A0M7AL10_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04116</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ75096.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75096">
        <property type="protein sequence ID" value="CTQ75096"/>
        <property type="gene ID" value="LAX5112_04116"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ75096.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="419" mass="45324" checksum="4C068FBE28874365" modified="2015-12-09" version="1">MQIVMAIVAGQIVVAGPAVQLVGTVAADKDVVVRPFDFDNLAADTFMTWVRIGAAVVLLIMRIEDQRVLHPDVDGEDAVVKVPVAAIVKVFKPERDCSGIGFQDASGVQNAIRVQINGLAESRCVIRIGADHRFSAVRRDMIQPWSVTMDGGLIAIRILEHQLGGVFAFLPNVQIQALIAAVQAVAIGDDKETERVTGLDIQVFPTFALNQIAAASLQRGVRPQNLDVCDKSIFLDLVVAESVSIAGCFTFEHNRHRMIIHDLNAGDLDQVWSTGAVEDVVAVVAIEDIVACAAPDFVISVLSGHDVVPEAAGHNVRMPSANKCIVFIRPDHGTRCGQTCHFLSPYSLRRTQSKEAVAGNGPLTLQNVHVRSYLIQLDRGGVDLDASGVTVLHDPVFDFEKAMPENAKQEFCANQQFSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMW6</accession>
    <name>A0A0M7AMW6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Ribosomal RNA large subunit methyltransferase E</fullName>
            <ecNumber evidence="4">2.1.1.166</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">23S rRNA Um2552 methyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="4">rRNA (uridine-2'-O-)-methyltransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="4 8" type="primary">rlmE</name>
        <name evidence="4" type="synonym">ftsJ</name>
        <name evidence="4" type="synonym">rrmJ</name>
        <name evidence="8" type="ORF">LAX5112_04049</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>S-adenosyl-L-methionine + uridine(2552) in 23S rRNA = 2'-O-methyluridine(2552) in 23S rRNA + H(+) + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:42720"/>
            <dbReference type="Rhea" id="RHEA-COMP:10202"/>
            <dbReference type="Rhea" id="RHEA-COMP:10203"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:65315"/>
            <dbReference type="ChEBI" id="CHEBI:74478"/>
            <dbReference type="EC" id="2.1.1.166"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.166" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ74944.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008192470.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04049"/>
    <dbReference type="EnsemblBacteria" id="CTQ74944">
        <property type="protein sequence ID" value="CTQ74944"/>
        <property type="gene ID" value="LAX5112_04049"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008650">
        <property type="term" value="F:rRNA (uridine-2'-O-)-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01547">
        <property type="entry name" value="RNA_methyltr_E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002877">
        <property type="entry name" value="RNA_MeTrfase_FtsJ_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015507">
        <property type="entry name" value="rRNA-MeTfrase_E"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01728">
        <property type="entry name" value="FtsJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005461">
        <property type="entry name" value="23S_rRNA_mtase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2 4 8" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 4" id="KW-0698">rRNA processing</keyword>
    <keyword evidence="3 4 5" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="4 8" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="FtsJ" evidence="7">
        <location>
            <begin position="49"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="8"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="4 5">
        <location>
            <position position="185"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="81"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="83"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="104"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="120"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="145"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01547"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR005461-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF01728"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ74944.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="236" mass="26154" checksum="65B422D42BE74D28" modified="2015-12-09" version="1">MSGSKKRGSGDRGMHVKVKSAAGRRESSTRWLSRQLNDPYVRRAKIDGYRSRAAYKLIEIDDKHKLLKPGYRVVDLGCAPGGWCQIAVDRVKSTIDSPKVVGIDYLDMDHVRGAVFLKKDFLDDDAPAALMEALGGHKPDVVLSDMAAPTTGHKQTDHLRTTHLFEIAIDFARRNLVPGGSFLAKVFRGGTENAMLQELKREFKSVAHLKPPASRKESPELYVIAKGFRGSDLPED</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AN43</accession>
    <name>A0A0M7AN43_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Long-chain-fatty-acid--CoA ligase FadD13</fullName>
            <ecNumber evidence="4">6.2.1.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_04458</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="6.2.1.3" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ76077.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673663.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000024.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04458"/>
    <dbReference type="EnsemblBacteria" id="CTQ76077">
        <property type="protein sequence ID" value="CTQ76077"/>
        <property type="gene ID" value="LAX5112_04458"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004467">
        <property type="term" value="F:long-chain fatty acid-CoA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12780">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025110">
        <property type="entry name" value="AMP-bd_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045851">
        <property type="entry name" value="AMP-bd_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020845">
        <property type="entry name" value="AMP-binding_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000873">
        <property type="entry name" value="AMP-dep_Synth/Lig"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042099">
        <property type="entry name" value="ANL_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00501">
        <property type="entry name" value="AMP-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13193">
        <property type="entry name" value="AMP-binding_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00455">
        <property type="entry name" value="AMP_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0007">Acetylation</keyword>
    <keyword evidence="4" id="KW-0436">Ligase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AMP-binding" evidence="2">
        <location>
            <begin position="9"/>
            <end position="405"/>
        </location>
    </feature>
    <feature type="domain" description="AMP-binding_C" evidence="3">
        <location>
            <begin position="414"/>
            <end position="489"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022990"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF13193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ76077.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="507" mass="55774" checksum="B7263B4801E812B3" modified="2015-12-09" version="1">MPKTLICGPRSMDHADIRIQARRAASGFLKAGVTEGGTVATMMRNDFPLVAMDLAAALVKAAAVPVNWRFTAEEAAYILKDCKARVFVIHADLWNQIGSDLPADVIDQLQIIIVPTPPDIAVSYGLSVDACAVPDGCPVWEDWLAEQSAWDGPDAHGQAAMIYTSGTTGHPKGVRRLTNPTLVSTGYNKIFSEDCRTLMVAPMYHSAPNRFAMLTVDVGGDLVLVPRFDPEKILQIIEEHQITTAFMVPTMFIRLLKLPAAVRRHYDTSSLRHIVAAGAPFPPDIKRAMIGWWGPVIFEYYGGTETGAVTLCSSEEALHKPGTVGRAVEDASIKIFAEDGSECPPNVPGEIYCRLHSFPDFIYEGRPEDRAVVERDGLFTVGDIGYLDEDGYLFISDRKRDMIISGGVNIYPAEIEAAMFGHDQVHDCAVFGIPDPELGEAIAVAIQPEPDTTIDTGQLQDYLRSRIASYMIPRKILIKDSLPRDDNGKIFKRKLRDAFWADAGRRI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANH8</accession>
    <name>A0A0M7ANH8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04193</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75343.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75343">
        <property type="protein sequence ID" value="CTQ75343"/>
        <property type="gene ID" value="LAX5112_04193"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ75343.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="193" mass="21917" checksum="A8C6263788E270A1" modified="2015-12-09" version="1">MNFSFRILWIICPVALVAASVGYSHLSSVSLFGTRDEKYDERIIDQFSGIETKSVTTTYVPGKGGFRLTDTNHLEGLNGKPLDKISFILGSLAYDFIAGDTAAIKIRKILQEPTNPEEQTFEHTTDIEAIINYSCDSKVFRKRIPESIIDEIAQFIDSAGYRLAMASEHMTMMKRLTKLNMYSEHCLEKFQYH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANI0</accession>
    <name>A0A0M7ANI0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Trehalose import ATP-binding protein SugC</fullName>
            <ecNumber evidence="8">3.6.3.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">sugC_3</name>
        <name evidence="8" type="ORF">LAX5112_04598</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.-" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000027">
        <property type="protein sequence ID" value="CTQ76459.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673789.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000027.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04598"/>
    <dbReference type="EnsemblBacteria" id="CTQ76459">
        <property type="protein sequence ID" value="CTQ76459"/>
        <property type="gene ID" value="LAX5112_04598"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008995">
        <property type="entry name" value="Mo/tungstate-bd_C_term_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013611">
        <property type="entry name" value="Transp-assoc_OB_typ2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08402">
        <property type="entry name" value="TOBE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50331">
        <property type="entry name" value="SSF50331"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ABC transporter" evidence="7">
        <location>
            <begin position="4"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="36"/>
            <end position="43"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ76459.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="365" mass="40175" checksum="92549A07101FDC16" modified="2015-12-09" version="1">MAEIVIRNLRKTFGDFTAVQSSSFKIEDGEFFMLLGPSGCGKTTTLRMIAGLELPTSGEIYIDGEEVGQRPARQRDIAFVFQMFALYPHMNVRKNISYPLISQGMSKRQVTEKVAEVSRILGIEDILDRPVGGLSGGDRQRVALGRAIVREPKAFMMDEPLGALDAEFREHMAEELRALHDRMGATTVYVTHDQLEAMQMGDKIVVMNHGVIEQFGTPQDVYDKPASMFVADFIGSPPMNFLRFHGQVHPGASSVRMHHADIVIPSAREPFEGDLVYGIRPEHISLTDESDSRGEVVAAEYLGTTQIVTIKTPGGDLKARVPSGHTVRSGEQVGLTFNGMTATLFDNQSGRALRSELNEGVLAHV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANI9</accession>
    <name>A0A0M7ANI9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">V-type ATP synthase subunit E</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04428</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ75992.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673643.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000024.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04428"/>
    <dbReference type="EnsemblBacteria" id="CTQ75992">
        <property type="protein sequence ID" value="CTQ75992"/>
        <property type="gene ID" value="LAX5112_04428"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="45"/>
            <end position="72"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75992.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="233" mass="24706" checksum="468ADF095E2EFF7F" modified="2015-12-09" version="1">MSETKTAGELETAAGAGVQALIDRLKAEGVEAGQSEAEAILADAKAKAEALVVEAEKRAAALKAAARAEAAQEKAATEDGLKVAARDLVLDMRNELGERIQQEAKRLVATTLADEAFLQKLILAMAANAKESASVSDAEPMEIVLPEKIVTFEELKQSPEAVEPGTLTHFVIALAGDVLREGVTFSTAPGFDGIKIKLTGRDVSIDLTEEAIATLLKRHLQPRLRAVMEGVLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANN7</accession>
    <name>A0A0M7ANN7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04483</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ76141.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673679.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000024.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04483"/>
    <dbReference type="EnsemblBacteria" id="CTQ76141">
        <property type="protein sequence ID" value="CTQ76141"/>
        <property type="gene ID" value="LAX5112_04483"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009003">
        <property type="entry name" value="Peptidase_S1_PA"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50494">
        <property type="entry name" value="SSF50494"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ76141.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="253" mass="27928" checksum="8B8BEAECAF3534AA" modified="2015-12-09" version="1">MIETLLFTAARIQTLSQGQVLTNATGFFFKRDDRLYLVSSRHVFVDEASRHFPDSVQIELHTSAENVAQTVRFLIPIYRDGQSLWRQAVDGGGQIDVALIELDRQFLPDPCILHAFSEAHLIDPLVKQPEVGEPLLIPGYPLGFSDTLHALPVVRHAIIASSFGMRFQGQGYFLTDARTHRGSSGAPVLMRSTNGHVGDSELSCYLLGIHSARLDVGTRDVTVDEALGLNCAWYADILMTLTDETSSSIESRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQ45</accession>
    <name>A0A0M7AQ45_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative oxidoreductase YdgJ</fullName>
            <ecNumber evidence="3">1.-.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ydgJ_2</name>
        <name evidence="3" type="ORF">LAX5112_04575</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.-.-.-" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000026">
        <property type="protein sequence ID" value="CTQ76380.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673782.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000026.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04575"/>
    <dbReference type="EnsemblBacteria" id="CTQ76380">
        <property type="protein sequence ID" value="CTQ76380"/>
        <property type="gene ID" value="LAX5112_04575"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004104">
        <property type="entry name" value="Gfo/Idh/MocA-like_OxRdtase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000683">
        <property type="entry name" value="Gfo/Idh/MocA-like_OxRdtase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01408">
        <property type="entry name" value="GFO_IDH_MocA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02894">
        <property type="entry name" value="GFO_IDH_MocA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GFO_IDH_MocA" evidence="1">
        <location>
            <begin position="11"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="domain" description="GFO_IDH_MocA_C" evidence="2">
        <location>
            <begin position="138"/>
            <end position="342"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01408"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02894"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ76380.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="348" mass="38704" checksum="970DFA6A27881F64" modified="2015-12-09" version="1">MNRQKKETQPLRVACLGAGYFAQFHYDAWRRTGRVILVGACDQDLEKAKATGLAAFKDLAVMLKMSCPDLLDIITPPPTHLSAIKAGISHGVRAIICQKPFCTSLEEAEEATRLAEKAGVVLVIHENFRFQPWYRTFKHALDSGVLGDVLQLTFRLRTGDGQGPRAYLDRQPYFQDMPQLLIHETGVHWVDTFRYLLGEPEAVYADLRRLNPVIKGEDAGYFVFDYPGGVRALFDGNRLLDHAAENCRTTLGEASLEGTAGSMSLSGDGSVTLRQFGNVTETVLLQPQSWKGFGGDCVKNLITHVVDGVLDGKPLENEARDYLKVIALEKMIYEADRQGRKIREVAYA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQX2</accession>
    <name>A0A0M7AQX2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">ADP-ribose pyrophosphatase</fullName>
            <ecNumber evidence="4">3.6.1.13</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">nudF_2</name>
        <name evidence="4" type="ORF">LAX5112_04865</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the Nudix hydrolase family.</text>
    </comment>
    <dbReference type="EC" id="3.6.1.13" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000033">
        <property type="protein sequence ID" value="CTQ77299.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674013.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000033.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04865"/>
    <dbReference type="EnsemblBacteria" id="CTQ77299">
        <property type="protein sequence ID" value="CTQ77299"/>
        <property type="gene ID" value="LAX5112_04865"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047631">
        <property type="term" value="F:ADP-ribose diphosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020476">
        <property type="entry name" value="Nudix_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015797">
        <property type="entry name" value="NUDIX_hydrolase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020084">
        <property type="entry name" value="NUDIX_hydrolase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000086">
        <property type="entry name" value="NUDIX_hydrolase_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00293">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00502">
        <property type="entry name" value="NUDIXFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55811">
        <property type="entry name" value="SSF55811"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51462">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00893">
        <property type="entry name" value="NUDIX_BOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 2 4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nudix hydrolase" evidence="3">
        <location>
            <begin position="50"/>
            <end position="179"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU003476"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51462"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ77299.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="192" mass="21058" checksum="D68112581FD82373" modified="2015-12-09" version="1">MGLPIAPLDQTTWTLLGSEKVFEAGDRLKVLRQTVELPDHTRVEDYYQIDLPTYATVYAVTEKDEVLLLEQYKHGVGHVCLTLPGGQIDPGENPEFAARRELLEETGYGGGRWTAGPALVLHGNQRVALGHIFVARHVIQLSDPCPGDLEEMQLRLRSRKRVQQDLLSGALPITSHAAAVGIAETMIRASGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AR51</accession>
    <name>A0A0M7AR51_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Methyl-accepting chemotaxis protein 4</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">mcp4_18</name>
        <name evidence="7" type="ORF">LAX5112_04741</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the methyl-accepting chemotaxis (MCP) protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000029">
        <property type="protein sequence ID" value="CTQ76896.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76896">
        <property type="protein sequence ID" value="CTQ76896"/>
        <property type="gene ID" value="LAX5112_04741"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004888">
        <property type="term" value="F:transmembrane signaling receptor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006935">
        <property type="term" value="P:chemotaxis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004090">
        <property type="entry name" value="Chemotax_Me-accpt_rcpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004089">
        <property type="entry name" value="MCPsignal_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00015">
        <property type="entry name" value="MCPsignal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00260">
        <property type="entry name" value="CHEMTRNSDUCR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00283">
        <property type="entry name" value="MA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50111">
        <property type="entry name" value="CHEMOTAXIS_TRANSDUC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0807">Transducer</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="21"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="451"/>
            <end position="474"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="6">
        <location>
            <begin position="471"/>
            <end position="524"/>
        </location>
    </feature>
    <feature type="domain" description="Methyl-accepting transducer" evidence="5">
        <location>
            <begin position="550"/>
            <end position="793"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="775"/>
            <end position="794"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00029447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ76896.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="820" mass="86239" checksum="B406FE6ACF328DF8" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AR88</accession>
    <name>A0A0M7AR88_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04988</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000038">
        <property type="protein sequence ID" value="CTQ77638.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77638">
        <property type="protein sequence ID" value="CTQ77638"/>
        <property type="gene ID" value="LAX5112_04988"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ77638.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="68" mass="7515" checksum="9556FCFFAE432D0D" modified="2015-12-09" version="1">MRGPCVKSTLRGKIVQFTVACADTKFVSNIDNDFYSGELRFNKGKNGVHLNYLHRAGQSGEICPGHMV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARW5</accession>
    <name>A0A0M7ARW5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">D-malate degradation protein R</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">dmlR_14</name>
        <name evidence="3" type="ORF">LAX5112_04896</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000034">
        <property type="protein sequence ID" value="CTQ77397.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04896"/>
    <dbReference type="EnsemblBacteria" id="CTQ77397">
        <property type="protein sequence ID" value="CTQ77397"/>
        <property type="gene ID" value="LAX5112_04896"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00039">
        <property type="entry name" value="HTHLYSR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ77397.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="306" mass="33513" checksum="FDFA098E72120B4B" modified="2015-12-09" version="1">MDLNDAFYFVQVVEKGGFSAAARSLNIPKSRLSRRVRQLEEDLGVRLLQRTSRIVTTTEIGEDYYRHAQKALAQFEVAETAVRRKTNRIEGTVTVSCSVGMAQFGLDQILPRFLQDNPGVSVVQRASNRMEDLIKGGIDMAIRGHMDTLPDSSLIQVRLARVEWHLFCSPDYQSTLDPSNDPAGLANHPALVLGKPGAMHQWLLTDRNGQSASIPCKVRFASDDMSTLKNAAALSLGVVALPCYVCQQEVEAGSLVRVLPGWTAGTPQISLLMPSREGLLPAFEVLLDFLKRELPNVLASGAPEAT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARY6</accession>
    <name>A0A0M7ARY6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Hydantoin racemase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04635</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000027">
        <property type="protein sequence ID" value="CTQ76563.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673821.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000027.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04635"/>
    <dbReference type="EnsemblBacteria" id="CTQ76563">
        <property type="protein sequence ID" value="CTQ76563"/>
        <property type="gene ID" value="LAX5112_04635"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0036361">
        <property type="term" value="F:racemase activity, acting on amino acids and derivatives"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006807">
        <property type="term" value="P:nitrogen compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015942">
        <property type="entry name" value="Asp/Glu/hydantoin_racemase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01177">
        <property type="entry name" value="Asp_Glu_race"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ76563.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="220" mass="23484" checksum="83EFCF6415DFC459" modified="2015-12-09" version="1">MTHHHILVINPNTTVSMTQKIAVAARQAASPATRITAVNPSEGPKVIQGPDDGAAALPGLFDLFDRTLQANPKITAVIIACFDDTGLFELKKKSRIPVIGIGEAAYHLASITALKFSVVTTLSVSVPVLEDNLRRFGLANRCTKVRASEVPVLALEDPDSDARHRIEREIETALEEDDIGAIALGCAGMADLAKDLSKRFNIPVIDGVASAVKLSEISIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AVB2</accession>
    <name>A0A0M7AVB2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">fixL_2</name>
        <name evidence="8" type="ORF">LAX5112_04937</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000036">
        <property type="protein sequence ID" value="CTQ77524.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674080.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000036.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04937"/>
    <dbReference type="EnsemblBacteria" id="CTQ77524">
        <property type="protein sequence ID" value="CTQ77524"/>
        <property type="gene ID" value="LAX5112_04937"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00130">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000014">
        <property type="entry name" value="PAS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000700">
        <property type="entry name" value="PAS-assoc_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035965">
        <property type="entry name" value="PAS-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013767">
        <property type="entry name" value="PAS_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00989">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00091">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55785">
        <property type="entry name" value="SSF55785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00229">
        <property type="entry name" value="sensory_box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50113">
        <property type="entry name" value="PAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50112">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0808">Transferase</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="6"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="33"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="68"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="95"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="150"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="183"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="domain" description="PAS" evidence="6">
        <location>
            <begin position="243"/>
            <end position="313"/>
        </location>
    </feature>
    <feature type="domain" description="PAC" evidence="7">
        <location>
            <begin position="316"/>
            <end position="368"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="5">
        <location>
            <begin position="388"/>
            <end position="603"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50112"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50113"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ77524.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="609" mass="66216" checksum="27B9D0B734CB1F51" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZLK0</accession>
    <name>A0A0M6ZLK0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">CENP-V/GFA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_00017</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the Gfa family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63645.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040450652.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ63645">
        <property type="protein sequence ID" value="CTQ63645"/>
        <property type="gene ID" value="LAX5112_00017"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016846">
        <property type="term" value="F:carbon-sulfur lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006913">
        <property type="entry name" value="CENP-V/GFA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011057">
        <property type="entry name" value="Mss4-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04828">
        <property type="entry name" value="GFA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51316">
        <property type="entry name" value="SSF51316"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51891">
        <property type="entry name" value="CENP_V_GFA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CENP-V/GFA" evidence="3">
        <location>
            <begin position="3"/>
            <end position="112"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005495"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51891"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ63645.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="130" mass="14332" checksum="E1BA58278B87D62B" modified="2015-12-09" version="1">MMASGKCLCGAVAFEATPLPTMSACHCHTCRKWGGGPFMAVPCKNTSFSGDITRYSVTDRADRGFCPACGTHLFFYVKAADIYALPAGLFDDDPVPSLRAEYFIDQKPEYYCFAEQTKTLTGAEYFEKFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZNN8</accession>
    <name>A0A0M6ZNN8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00086</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63842.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670128.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ63842">
        <property type="protein sequence ID" value="CTQ63842"/>
        <property type="gene ID" value="LAX5112_00086"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ63842.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="82" mass="9585" checksum="3DDAF51F1D5FB164" modified="2015-12-09" version="1">MQHHFQNLFGFKSDDQISFDLPETQRLDPVRLRADIDAANLSEMWNMILTLDYAVQDVSDLPPEKQEEFLNVMSLLLTAFNR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPC6</accession>
    <name>A0A0M6ZPC6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">FeS cluster assembly protein SufD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">sufD</name>
        <name evidence="3" type="ORF">LAX5112_00153</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UPF0051 (ycf24) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64026.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670172.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00153"/>
    <dbReference type="EnsemblBacteria" id="CTQ64026">
        <property type="protein sequence ID" value="CTQ64026"/>
        <property type="gene ID" value="LAX5112_00153"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016226">
        <property type="term" value="P:iron-sulfur cluster assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000825">
        <property type="entry name" value="SUF_FeS_clus_asmbl_SufBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037284">
        <property type="entry name" value="SUF_FeS_clus_asmbl_SufBD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011542">
        <property type="entry name" value="SUF_FeS_clus_asmbl_SufD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045595">
        <property type="entry name" value="SufBD_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43575">
        <property type="entry name" value="PTHR43575"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01458">
        <property type="entry name" value="SUFBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19295">
        <property type="entry name" value="SufBD_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101960">
        <property type="entry name" value="SSF101960"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01981">
        <property type="entry name" value="sufD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SufBD_N" evidence="2">
        <location>
            <begin position="11"/>
            <end position="177"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF19295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ64026.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="439" mass="46485" checksum="2A44C1593324BE81" modified="2015-12-09" version="1">MNANAPIRNTQAESDLIDRYDAAKSALAGSVAVSALRESSLGQIKDKGLPHRRVEEYKYSDLRAFMKSAAPLATAADSAAVKGVLEASETFGDLDRFRIVVANGSFVAELSDIDALAAEGVTVSNLADALSGDEGAQLLKSPKTGPNDGLVALNTAFVQGGVVVTVKDGAEVSKPLELVQLATATGAQVVRNNITVGKGAKLRVLESFSGDTGAGEINTVFDYDVADNASVAATRLIAGKTEAARLLTTIATLGAEAEFKSLGFIAGPQFVRNQQFINFTGENSEAKIYGVSMAGGSDLADQTLIVDHAVPHCNSREFFKTVLDGEARGVYQGRINVAPHAQKTDGEMMTQALLLSETAEMANKPELEIFADDVLCAHGATSGQIDEDLLFYLRARGIPEDEAKTLLVLAFLSEAIEEYGEDDVTEGLEQRVRDWLAGH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPE0</accession>
    <name>A0A0M6ZPE0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">L-threonine dehydratase</fullName>
            <ecNumber evidence="9">4.3.1.19</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">Threonine deaminase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9 11" type="primary">ilvA</name>
        <name evidence="11" type="ORF">LAX5112_00347</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>L-threonine = 2-oxobutanoate + NH4(+)</text>
            <dbReference type="Rhea" id="RHEA:22108"/>
            <dbReference type="ChEBI" id="CHEBI:16763"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="ChEBI" id="CHEBI:57926"/>
            <dbReference type="EC" id="4.3.1.19"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 9">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="3 9">Amino-acid biosynthesis; L-isoleucine biosynthesis; 2-oxobutanoate from L-threonine: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="9">Homotetramer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4 9">Belongs to the serine/threonine dehydratase family.</text>
    </comment>
    <dbReference type="EC" id="4.3.1.19" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64639.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670338.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00347"/>
    <dbReference type="EnsemblBacteria" id="CTQ64639">
        <property type="protein sequence ID" value="CTQ64639"/>
        <property type="gene ID" value="LAX5112_00347"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00047">
        <property type="reaction ID" value="UER00054"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004794">
        <property type="term" value="F:L-threonine ammonia-lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009097">
        <property type="term" value="P:isoleucine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1020.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1100">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045865">
        <property type="entry name" value="ACT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011820">
        <property type="entry name" value="IlvA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001926">
        <property type="entry name" value="PLP-dep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001721">
        <property type="entry name" value="TD_ACT-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038110">
        <property type="entry name" value="TD_ACT-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036052">
        <property type="entry name" value="Trypto_synt_PLP_dependent"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00291">
        <property type="entry name" value="PALP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00585">
        <property type="entry name" value="Thr_dehydrat_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53686">
        <property type="entry name" value="SSF53686"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55021">
        <property type="entry name" value="SSF55021"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02079">
        <property type="entry name" value="THD1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51672">
        <property type="entry name" value="ACT_LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="8 9" id="KW-0100">Branched-chain amino acid biosynthesis</keyword>
    <keyword evidence="5 9" id="KW-0412">Isoleucine biosynthesis</keyword>
    <keyword evidence="7 9 11" id="KW-0456">Lyase</keyword>
    <keyword evidence="6 9" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ACT-like" evidence="10">
        <location>
            <begin position="336"/>
            <end position="409"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004810"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00010869"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022624"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU362012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51672"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ64639.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="418" mass="46116" checksum="9CEB120BBE891EB7" modified="2015-12-09" version="1">MGQFADDVSKIHELLSGVLEPTPLQYSQYLSDLHQADIWLKREDLTPVRSYKVRGAYAFIHQALDKDPDCALFVCSSAGNHAQGFAFACRHFGKPGIVFMPLTTPQQKIQKTRSFGAPLVDIKLIGDGFDAANKAALEYCSQNNGLMVPPFDHETIILGQATVGKEIVEQTPEGTHWDRLILPVGGGGLSAGVSRYFSEKSLTTKFSLVEPENAPSLHNSLQAKERVRLDWVDNFVDGAAVAQIGAENFKQLSTFAPEDVILAPTDGVCATMIDMLNIEGIVLEPAGALAIDALNRLPMEQVKGKKIVCVVSGGNFDFERLPEVKERALKFSGLKKYYVIQLPQRPGALKDFLSLLGPDDDIARFEYLKKSARNFGSVLIGIETKQPENFQTLHDSFDRSDIRWEDITDNEAIANFVI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPT0</accession>
    <name>A0A0M6ZPT0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">TRAP-type C4-dicarboxylate transport system, small permease component</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">LAX5112_00272</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64367.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670253.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00272"/>
    <dbReference type="EnsemblBacteria" id="CTQ64367">
        <property type="protein sequence ID" value="CTQ64367"/>
        <property type="gene ID" value="LAX5112_00272"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007387">
        <property type="entry name" value="TRAP_DctQ"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35011">
        <property type="entry name" value="PTHR35011"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04290">
        <property type="entry name" value="DctQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="15"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="49"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="87"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="136"/>
            <end position="157"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ64367.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="177" mass="19273" checksum="788349DC46D7A99A" modified="2015-12-09" version="1">MTSLVHLLRRLNDRVAMGVGIVLLVCVAFTLVEIITRKLGAGLGGVDEISGYVMAVTTAWGISYALTEQAHVRIDLLRQRLVPFGRAVFDVISMACLAGTAIVVAWRGWSVLEKTLSTGARANTPLETPLWIPQTLWWLGWVWFAMSATILLVSVAVRFATSDYKSVDQIAGARGEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQS2</accession>
    <name>A0A0M6ZQS2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Pyrimidine 5'-nucleotidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00515</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65115.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00515"/>
    <dbReference type="EnsemblBacteria" id="CTQ65115">
        <property type="protein sequence ID" value="CTQ65115"/>
        <property type="gene ID" value="LAX5112_00515"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006439">
        <property type="entry name" value="HAD-SF_hydro_IA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041492">
        <property type="entry name" value="HAD_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010237">
        <property type="entry name" value="Pyr-5-nucltdase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13419">
        <property type="entry name" value="HAD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDG01132">
        <property type="entry name" value="C1.5.3:_5'-Nucleotidase_Like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01509">
        <property type="entry name" value="HAD-SF-IA-v3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01993">
        <property type="entry name" value="Pyr-5-nucltdase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ65115.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="219" mass="24549" checksum="899526A186FDC71D" modified="2015-12-09" version="1">MFDLDNTLYPHEADLFPQINDQISKYVQKILDLGRDEAMVHQKALYHEYGTTLRGLMTTHSIDPDDYLAFVHDIDYSNLAPDPDLGTAIEALPGKKFIFTNGDRPHAERTAEALGISNHFEDIFDIVSAELIPKPNRETYEMFLSRTGVAPARAAMFEDLAKNLSVPHHLGMRTTLIVPRGAREVLQENLDLEADPYPHVDFVTEDLAGFLKAVKGSLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQU1</accession>
    <name>A0A0M6ZQU1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Arylsulfatase</fullName>
            <ecNumber evidence="5">3.1.6.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">atsA_1</name>
        <name evidence="5" type="ORF">LAX5112_00522</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="PTM">
        <text evidence="1">The conversion to 3-oxoalanine (also known as C-formylglycine, FGly), of a serine or cysteine residue in prokaryotes and of a cysteine residue in eukaryotes, is critical for catalytic activity.</text>
    </comment>
    <dbReference type="EC" id="3.1.6.1" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65135.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00522"/>
    <dbReference type="EnsemblBacteria" id="CTQ65135">
        <property type="protein sequence ID" value="CTQ65135"/>
        <property type="gene ID" value="LAX5112_00522"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004065">
        <property type="term" value="F:arylsulfatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017850">
        <property type="entry name" value="Alkaline_phosphatase_core_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000917">
        <property type="entry name" value="Sulfatase_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00884">
        <property type="entry name" value="Sulfatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53649">
        <property type="entry name" value="SSF53649"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809043" evidence="3">
        <location>
            <begin position="31"/>
            <end position="533"/>
        </location>
    </feature>
    <feature type="domain" description="Sulfatase" evidence="4">
        <location>
            <begin position="40"/>
            <end position="383"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="514"/>
            <end position="533"/>
        </location>
    </feature>
    <feature type="modified residue" description="3-oxoalanine (Cys)" evidence="1">
        <location>
            <position position="89"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRSR" id="PIRSR600917-51"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ65135.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="533" mass="58782" checksum="9ACE4C1ACD64BE97" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRA5</accession>
    <name>A0A0M6ZRA5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Adenylate cyclase 1</fullName>
            <ecNumber evidence="2">4.6.1.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">cyaA_2</name>
        <name evidence="2" type="ORF">LAX5112_00344</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="4.6.1.1" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64630.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670335.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00344"/>
    <dbReference type="EnsemblBacteria" id="CTQ64630">
        <property type="protein sequence ID" value="CTQ64630"/>
        <property type="gene ID" value="LAX5112_00344"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004016">
        <property type="term" value="F:adenylate cyclase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009190">
        <property type="term" value="P:cyclic nucleotide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035556">
        <property type="term" value="P:intracellular signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07302">
        <property type="entry name" value="CHD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1230">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001054">
        <property type="entry name" value="A/G_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00211">
        <property type="entry name" value="Guanylate_cyc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00044">
        <property type="entry name" value="CYCc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50125">
        <property type="entry name" value="GUANYLATE_CYCLASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Guanylate cyclase" evidence="1">
        <location>
            <begin position="26"/>
            <end position="151"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64630.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="202" mass="21712" checksum="78E66590610BE631" modified="2015-12-09" version="1">MPRQLVTRLIEEGMTDSRNIELREMTIVFTDLADFTSLASNLSAEETAVYLNGYFEMVSKVIADREGTIDKFLGDGVMAFWGAPSDQPDHASKAIAAVTALADEIEKDNALNMRLRIGIHTGKVVVGDIGSASRMNYTVIGDAVNVAARLQEYGKHVDPGAKVIALASGDTMAQLPEGAKATSLGPVKLRGREEALTVFRIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRR1</accession>
    <name>A0A0M6ZRR1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00182</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64113.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008195900.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00182"/>
    <dbReference type="EnsemblBacteria" id="CTQ64113">
        <property type="protein sequence ID" value="CTQ64113"/>
        <property type="gene ID" value="LAX5112_00182"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ64113.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="148" mass="16638" checksum="8E00415D1D542A31" modified="2015-12-09" version="1">MSKLREAAAMEPEADDKTRKRQAAIAEALTGFIEDLKLVDVLDFAAYIRLEQHANIADLVKTSAELFFKEDTLRYSMGGQAELDWDSLPRIRLDLEFLNKGVWIYFTVVLASPDNSVNVSYVEIPDSGGDPDKEAELMLEALKDARLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZST9</accession>
    <name>A0A0M6ZST9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Leucine-responsive regulatory protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">lrp_2</name>
        <name evidence="5" type="ORF">LAX5112_00576</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65291.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670504.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00576"/>
    <dbReference type="EnsemblBacteria" id="CTQ65291">
        <property type="protein sequence ID" value="CTQ65291"/>
        <property type="gene ID" value="LAX5112_00576"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000485">
        <property type="entry name" value="AsnC-type_HTH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019888">
        <property type="entry name" value="Tscrpt_reg_AsnC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019887">
        <property type="entry name" value="Tscrpt_reg_AsnC/Lrp_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01037">
        <property type="entry name" value="AsnC_trans_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00033">
        <property type="entry name" value="HTHASNC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00344">
        <property type="entry name" value="HTH_ASNC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50956">
        <property type="entry name" value="HTH_ASNC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH asnC-type" evidence="4">
        <location>
            <begin position="2"/>
            <end position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50956"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ65291.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="151" mass="17394" checksum="F4CBAC614BEC30E3" modified="2015-12-09" version="1">MLDATDRRILKVLQEDGRITNTDLSEKVRLSPTATAERVKRLTREKYIEHFSASLDPKKVDRGLLVFVEIRLERTSPEIFDAFKRAVERSPDILECHMVAGGYDYLMKSRVKDMEAYRAFLSDVVLALPGVRETHTYAVMEEIKDTHILPV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTA3</accession>
    <name>A0A0M6ZTA3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Bicarbonate transport ATP-binding protein CmpD</fullName>
            <ecNumber evidence="7">3.6.3.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">cmpD_2</name>
        <name evidence="7" type="ORF">LAX5112_00668</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.-" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65537.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670616.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00668"/>
    <dbReference type="EnsemblBacteria" id="CTQ65537">
        <property type="protein sequence ID" value="CTQ65537"/>
        <property type="gene ID" value="LAX5112_00668"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="6">
        <location>
            <begin position="7"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="242"/>
            <end position="273"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="39"/>
            <end position="46"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ65537.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="273" mass="29844" checksum="A29C68EB8D8E742A" modified="2015-12-09" version="1">MTASAKLSVQGLAKYYDGNPVLERIALKVDAGSFCTIVGASGCGKSTFLRMLLSQEHPTHGEILLDGTPLPKEPTPDRGIVFQKYSVFTHLTVVENLILAEEFEQAPRLGKLLGARRKTAVEQIEDVLERIGLAAARDKYPAQLSGGMQQRLAIAQALIKKPSILLLDEPFGALDPGIRLDMHELLIGLWKETGMTIFMVTHDIHEAFKLGTRLLVFDKIRHDPQAPEAYGATITYDLPLSDQSGGEKNAPADIASTIRSAPQPDIQISQKTH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTB8</accession>
    <name>A0A0M6ZTB8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">SoxAX cytochrome complex subunit A</fullName>
            <ecNumber evidence="12">2.8.5.2</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="12">Protein SoxA</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="12">Sulfur oxidizing protein A</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="12">Thiosulfate-oxidizing multienzyme system protein SoxA</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="17" type="ORF">LAX5112_00839</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="18" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="18">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="10 12">
            <text>2 Fe(III)-[cytochrome c] + L-cysteinyl-[SoxY protein] + thiosulfate = 2 Fe(II)-[cytochrome c] + 2 H(+) + S-sulfosulfanyl-L-cysteinyl-[SoxY protein]</text>
            <dbReference type="Rhea" id="RHEA:56720"/>
            <dbReference type="Rhea" id="RHEA-COMP:10350"/>
            <dbReference type="Rhea" id="RHEA-COMP:14328"/>
            <dbReference type="Rhea" id="RHEA-COMP:14399"/>
            <dbReference type="Rhea" id="RHEA-COMP:14691"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29033"/>
            <dbReference type="ChEBI" id="CHEBI:29034"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:33542"/>
            <dbReference type="ChEBI" id="CHEBI:139321"/>
            <dbReference type="EC" id="2.8.5.2"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="11 12">
            <text>2 Fe(III)-[cytochrome c] + S-sulfanyl-L-cysteinyl-[SoxY protein] + thiosulfate = 2 Fe(II)-[cytochrome c] + 2 H(+) + S-(2-sulfodisulfanyl)-L-cysteinyl-[SoxY protein]</text>
            <dbReference type="Rhea" id="RHEA:51224"/>
            <dbReference type="Rhea" id="RHEA-COMP:10350"/>
            <dbReference type="Rhea" id="RHEA-COMP:14399"/>
            <dbReference type="Rhea" id="RHEA-COMP:14689"/>
            <dbReference type="Rhea" id="RHEA-COMP:14690"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29033"/>
            <dbReference type="ChEBI" id="CHEBI:29034"/>
            <dbReference type="ChEBI" id="CHEBI:33542"/>
            <dbReference type="ChEBI" id="CHEBI:61963"/>
            <dbReference type="ChEBI" id="CHEBI:140664"/>
            <dbReference type="EC" id="2.8.5.2"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="14">
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </cofactor>
        <text evidence="14">Binds 2 heme groups per subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2 12">Heterodimer of SoxA and SoxX.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 12">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="9 12">Belongs to the SoxA family.</text>
    </comment>
    <dbReference type="EC" id="2.8.5.2" evidence="12"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66015.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670743.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00839"/>
    <dbReference type="EnsemblBacteria" id="CTQ66015">
        <property type="protein sequence ID" value="CTQ66015"/>
        <property type="gene ID" value="LAX5112_00839"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070069">
        <property type="term" value="C:cytochrome complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016669">
        <property type="term" value="F:oxidoreductase activity, acting on a sulfur group of donors, cytochrome as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019417">
        <property type="term" value="P:sulfur oxidation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.760.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036909">
        <property type="entry name" value="Cyt_c-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025710">
        <property type="entry name" value="SoxA"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF038455">
        <property type="entry name" value="SoxA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46626">
        <property type="entry name" value="SSF46626"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR04484">
        <property type="entry name" value="thiosulf_SoxA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="12" id="KW-0249">Electron transport</keyword>
    <keyword evidence="4 12 14" id="KW-0349">Heme</keyword>
    <keyword evidence="8 12 15" id="KW-0408">Iron</keyword>
    <keyword evidence="6 12 15" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7 12" id="KW-0574">Periplasm</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="16" id="KW-0732">Signal</keyword>
    <keyword evidence="5 12" id="KW-0808">Transferase</keyword>
    <keyword evidence="3 12" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="16">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809265" description="SoxAX cytochrome complex subunit A" evidence="16">
        <location>
            <begin position="28"/>
            <end position="285"/>
        </location>
    </feature>
    <feature type="active site" description="Cysteine persulfide intermediate" evidence="13">
        <location>
            <position position="246"/>
        </location>
    </feature>
    <feature type="binding site" description="covalent" evidence="14">
        <location>
            <position position="100"/>
        </location>
        <ligand>
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" description="covalent" evidence="14">
        <location>
            <position position="103"/>
        </location>
        <ligand>
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="15">
        <location>
            <position position="104"/>
        </location>
        <ligand>
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
            <label>1</label>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <feature type="binding site" description="covalent" evidence="14">
        <location>
            <position position="201"/>
        </location>
        <ligand>
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" description="covalent" evidence="14">
        <location>
            <position position="204"/>
        </location>
        <ligand>
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="15">
        <location>
            <position position="205"/>
        </location>
        <ligand>
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
            <label>2</label>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="242"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="15">
        <location>
            <position position="246"/>
        </location>
        <ligand>
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
            <label>2</label>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011530"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00025746"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00029285"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00029308"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRNR" id="PIRNR038455"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="PIRSR" id="PIRSR038455-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="PIRSR" id="PIRSR038455-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="PIRSR" id="PIRSR038455-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="CTQ66015.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="285" mass="31725" checksum="8CC2F0557634BAB2" modified="2015-12-09" version="1">MTKNTGRSAAAILATGLVLGMSNQAFADENAELIVEGEQLVTKVAAPEGHPLDELFSGWRFRSDETQALQTDDFENPAFAAVDYGAELWETEAGTSGKSCASCHGDASESMKGLRASMPKWHEDENTLMTLEDHINWSRKEHQGADPWKWESAEMLAMTAFLGLQSRGMPVNVKIDGPAEDWFNKGKELYYTRVGQLDMSCSNCHEDNYGNMIRADHLSQGQINGFPTYRLKWQGLGSTHRRFKGCMDNIRATPFKRGSDEFTSLELYLAWRGSGLSVETPAVRQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTD9</accession>
    <name>A0A0M6ZTD9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Putative inner membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">LAX5112_00829</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the UPF0394 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65988.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670735.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00829"/>
    <dbReference type="EnsemblBacteria" id="CTQ65988">
        <property type="protein sequence ID" value="CTQ65988"/>
        <property type="gene ID" value="LAX5112_00829"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007272">
        <property type="entry name" value="Sulf_transp"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04143">
        <property type="entry name" value="Sulf_transp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="14"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="52"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="94"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="124"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="172"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="199"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="255"/>
            <end position="277"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="298"/>
            <end position="317"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="323"/>
            <end position="345"/>
        </location>
    </feature>
    <feature type="domain" description="Sulf_transp" evidence="8">
        <location>
            <begin position="34"/>
            <end position="338"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009590"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF04143"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ65988.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="362" mass="37123" checksum="7BF0E96505DAC2EC" modified="2015-12-09" version="1">MDLTYFLDRFSEPAILTAGGFLAGAMFGGFAQQSRFCLRAAALDFAHGVFGFRLSIWLFAFSAALLGTQLLVGFGEVPSQEARQLASPQSLSGAALGGVMFGVGMVLARGCASRLLVLSATGNLRALLSGLVFAVIAQASLRGILKPLREWFAGLWTTADIGGNDLIAHLGLSQTVVLGFALLWLGAGIVIAIKAKTPLWQAIAACGAGLAVPLAWWFTSSVAGQAFEPVQIEGITFTGPSADTLMLFLSPAQSALDFGIGLVPGVFAGSFVAAVFARELELQGFEGGRSMARYGSGAALMGFGGMLAGGCAVGAGITGASVFAVTAWITLSAIWLSAGLTDFALNGRPAKTASAQPVAEIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTT9</accession>
    <name>A0A0M6ZTT9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00906</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66199.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670791.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00906"/>
    <dbReference type="EnsemblBacteria" id="CTQ66199">
        <property type="protein sequence ID" value="CTQ66199"/>
        <property type="gene ID" value="LAX5112_00906"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043743">
        <property type="term" value="F:LPPG:FO 2-phospho-L-lactate transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10680">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002882">
        <property type="entry name" value="CofD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038136">
        <property type="entry name" value="CofD-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027591">
        <property type="entry name" value="CofD-rel_GAK"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01933">
        <property type="entry name" value="CofD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF142338">
        <property type="entry name" value="SSF142338"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR04357">
        <property type="entry name" value="CofD_rel_GAK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ66199.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="393" mass="42751" checksum="9297F4D4B43E5086" modified="2015-12-09" version="1">MSEVTITRAVRMPDQFRIARFLSNPKLGPRLLFFSGGSALNDVSRCLKRYTHNSIHLVTPFDSGGSSQGLRLAFNMPAIGDLRSRLMALADETVLGQPDVFRLFTHRFSKESGQEELAGELEAMIAGIHPLVAVVEQPMRTLIQNQLRTFQEGCPSTFDLRGASIGNLILAGGYLNQNKQLEPIIFLVAKLVGVLGHVKAVSDDNLHLAAKLATGDIVVGQHLLTGKEQAPLTSPIEEIFLNRSLQTREPAVSVFPERNTALVQSADLICYSPGSLYTSLIASLLPRGVGRAVASRTVPKVYVPSLGHDPEAPGMTLEDRVQVLLAYLRKDAGSDCPVERLLNFVVTDQGTEEDDIAAVEQLGITVLRLDLISSKSDPYYDPVPLCEALVSLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTX6</accession>
    <name>A0A0M6ZTX6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">4-chlorobenzoyl coenzyme A dehalogenase-1</fullName>
            <ecNumber evidence="1">3.8.1.7</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">fcbB1_1</name>
        <name evidence="1" type="ORF">LAX5112_00915</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.8.1.7" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66225.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670800.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00915"/>
    <dbReference type="EnsemblBacteria" id="CTQ66225">
        <property type="protein sequence ID" value="CTQ66225"/>
        <property type="gene ID" value="LAX5112_00915"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018787">
        <property type="term" value="F:4-chlorobenzoyl-CoA dehalogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029045">
        <property type="entry name" value="ClpP/crotonase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001753">
        <property type="entry name" value="Enoyl-CoA_hydra/iso"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00378">
        <property type="entry name" value="ECH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52096">
        <property type="entry name" value="SSF52096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ66225.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="257" mass="28038" checksum="6EE32DA7C7851971" modified="2015-12-09" version="1">MTLVDTEHKDGAIWLYLNRPARHNALTQPLLDELFAEIRLAEGKKPAALVLSARGRSFSTGGDINGFLDHAGSQDRLVSYADKLVGSLHDIILSLIAFSSPVLAAVGGPVTGGSTGLVLAADMVALSNTAFIQPYYSEVGFAPDGGWTALMPEKIGTAKALEIQYLNTRISAEEAQRFGLATHVCAPSDVEPKIAEWVTGISRRFPQTHVATRQNVWDEPRRQLVKERLDREKARFLDLIARPETLAGMQEFTKQSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUX8</accession>
    <name>A0A0M6ZUX8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01017</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66575.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008188783.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01017"/>
    <dbReference type="EnsemblBacteria" id="CTQ66575">
        <property type="protein sequence ID" value="CTQ66575"/>
        <property type="gene ID" value="LAX5112_01017"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025461">
        <property type="entry name" value="ABA4-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14108">
        <property type="entry name" value="DUF4281"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="34"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="76"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="107"/>
            <end position="130"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66575.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="148" mass="15904" checksum="0FA94E23EB34BA9B" modified="2015-12-09" version="1">MDYETVFSTVSVLAMLGWVLLLISPLIPKWSDRISGYAIPSLLAINYVAIVSFFPVSEGGYGSFSAVAQLFSNPNAVMAGWVHFLAFDLFVGAWICRSARAKNMSFLLVLPCLPVTFLFGPAGFLMFVALGTLRSVVGADARANDAAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWK8</accession>
    <name>A0A0M6ZWK8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">3-oxoadipyl-CoA thiolase</fullName>
            <ecNumber evidence="4">2.3.1.174</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">paaJ</name>
        <name evidence="10" type="ORF">LAX5112_00801</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>acetyl-CoA + succinyl-CoA = 3-oxoadipyl-CoA + CoA</text>
            <dbReference type="Rhea" id="RHEA:19481"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57288"/>
            <dbReference type="ChEBI" id="CHEBI:57292"/>
            <dbReference type="ChEBI" id="CHEBI:57348"/>
            <dbReference type="EC" id="2.3.1.174"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Aromatic compound metabolism.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 7">Belongs to the thiolase-like superfamily. Thiolase family.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.174" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65914.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670716.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00801"/>
    <dbReference type="EnsemblBacteria" id="CTQ65914">
        <property type="protein sequence ID" value="CTQ65914"/>
        <property type="gene ID" value="LAX5112_00801"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00705"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033812">
        <property type="term" value="F:3-oxoadipyl-CoA thiolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019619">
        <property type="term" value="P:3,4-dihydroxybenzoate catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00751">
        <property type="entry name" value="thiolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.47.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012793">
        <property type="entry name" value="PcaF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002155">
        <property type="entry name" value="Thiolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016039">
        <property type="entry name" value="Thiolase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020615">
        <property type="entry name" value="Thiolase_acyl_enz_int_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020610">
        <property type="entry name" value="Thiolase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020617">
        <property type="entry name" value="Thiolase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020613">
        <property type="entry name" value="Thiolase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020616">
        <property type="entry name" value="Thiolase_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02803">
        <property type="entry name" value="Thiolase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00108">
        <property type="entry name" value="Thiolase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000429">
        <property type="entry name" value="Ac-CoA_Ac_transf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53901">
        <property type="entry name" value="SSF53901"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01930">
        <property type="entry name" value="AcCoA-C-Actrans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02430">
        <property type="entry name" value="pcaF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00098">
        <property type="entry name" value="THIOLASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00737">
        <property type="entry name" value="THIOLASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00099">
        <property type="entry name" value="THIOLASE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 10" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 7 10" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Thiolase_N" evidence="8">
        <location>
            <begin position="5"/>
            <end position="269"/>
        </location>
    </feature>
    <feature type="domain" description="Thiolase_C" evidence="9">
        <location>
            <begin position="277"/>
            <end position="400"/>
        </location>
    </feature>
    <feature type="active site" description="Acyl-thioester intermediate" evidence="6">
        <location>
            <position position="90"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="6">
        <location>
            <position position="357"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="6">
        <location>
            <position position="387"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012233"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR000429-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003557"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00108"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF02803"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ65914.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="401" mass="41768" checksum="ABA66181D7D3AAEE" modified="2015-12-09" version="1">MPNAFICDAVRTPIGRYGGALSQVRADDLAAIPLQALKERNSKVDWEAVADVILGCANQAGEDNRNVARMAVLLSGLPVSVPGTTVNRLCGSGMDAIGMAARAIRAGDAELMLAGGVESMSRAPFVVGKATTAFSRNAEMYDTTIGWRFKNKKLETTFGTHSMPETADNVAEDYKISREDQDKFAAESQRRWAAAQEAGVFKDEIVPVSIPQRKGDPIVVDTDEHPRPGTGVEALAKLRGVNAPDLTVTAGNASGVNDGSAAALIASEEAASANGLTPKARIVAMAAAGVPPRVMGIGPVPATQKVLGLAGLTLEQMDVIELNEAFASQSLAVLRELGLPDDAPHVNANGGAIAIGHPLGMSGSRLVLHAAKQLQRTSGQYALCTMCVGVGQGIALVLERV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWM3</accession>
    <name>A0A0M6ZWM3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01243</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67165.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671079.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67165">
        <property type="protein sequence ID" value="CTQ67165"/>
        <property type="gene ID" value="LAX5112_01243"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67165.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="76" mass="8966" checksum="F6BA23649EF2768F" modified="2015-12-09" version="1">MIHAIKNWFFNRWVLFHLPPKAPLYVLMADVEQEHMRYFYRGKTMLRQCFPAVDLIEIADGVLTIVKGDCIARVEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWQ9</accession>
    <name>A0A0M6ZWQ9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00980</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66470.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040453271.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00980"/>
    <dbReference type="EnsemblBacteria" id="CTQ66470">
        <property type="protein sequence ID" value="CTQ66470"/>
        <property type="gene ID" value="LAX5112_00980"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021309">
        <property type="entry name" value="DUF2892"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11127">
        <property type="entry name" value="DUF2892"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="31"/>
            <end position="53"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66470.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="67" mass="7254" checksum="AFB154A3A2552E2D" modified="2015-12-09" version="1">MTVERGILLVVGALVLATVLLAVYVNINWLWVTGILGVHLMQASFTGFCPVVMTLKKLGLPQRPGFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZX99</accession>
    <name>A0A0M6ZX99_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Beta-xylosidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01370</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the glycosyl hydrolase 32 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67398.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671175.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01370"/>
    <dbReference type="EnsemblBacteria" id="CTQ67398">
        <property type="protein sequence ID" value="CTQ67398"/>
        <property type="gene ID" value="LAX5112_01370"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004553">
        <property type="term" value="F:hydrolase activity, hydrolyzing O-glycosyl compounds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.115.10.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001362">
        <property type="entry name" value="Glyco_hydro_32"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013148">
        <property type="entry name" value="Glyco_hydro_32_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023296">
        <property type="entry name" value="Glyco_hydro_beta-prop_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00251">
        <property type="entry name" value="Glyco_hydro_32N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00640">
        <property type="entry name" value="Glyco_32"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75005">
        <property type="entry name" value="SSF75005"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glyco_hydro_32N" evidence="2">
        <location>
            <begin position="17"/>
            <end position="212"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009902"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ67398.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="509" mass="57666" checksum="0F2DA18E30BE3AD1" modified="2015-12-09" version="1">MYASHGFLRSDIGDVDVVYHEGLFHLFHLVLPNHDFIAHAVSLDGMTWRRVKNALFVGEPGDWDDDMLWTMHVTPDPERPGSWRMFYTGLARSEYGRVQRVGLARSKDLYHWERSTSKTYPIEVPGPHYESSIDEGRQWVSFRDPFYFQDPETRERLLLASARIKDGPIIRRGCVSLAVEEAPDQFVFEAPLHRPGLYDDVEVPNLFKLDGRYYLMGSIREDTKIHYWYSDQLRGPYENFFDNVLMPSGNYAGRICKNGGDLLLFNFFSKTEVVYGRESVKKLLPPPKELVTDAAGRLKAKSFSGFNDLVTRSESVTASYQCKMLYANPHATVVDREDGLHLSCKSGYEAFLMPGLHQDFRLRAELTLEGVGKTGLVLRVSEEGDGYYLSLDLVNGIAQMRAWGANPTPEFEHAFRYAPLQEAHFRGNAHGPWQVEVVAHGMYIEFSVDGYVVLSLVDDSFAEGGVGFYTESAAVCLSHLTIETLSRPVTEATAEQVYTATYLAPEEET</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZY21</accession>
    <name>A0A0M6ZY21_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01252</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67181.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671087.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67181">
        <property type="protein sequence ID" value="CTQ67181"/>
        <property type="gene ID" value="LAX5112_01252"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67181.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="67" mass="7495" checksum="21116BACF907080A" modified="2015-12-09" version="1">MKPLPQTRSVANRPVPPIKLARMRLRTFRPDSSTYRSGWTKTGHMDCLVFITVPRVDALSGSEGGRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYT7</accession>
    <name>A0A0M6ZYT7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Cytochrome c-type biogenesis protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">ccmH</name>
        <name evidence="6" type="ORF">LAX5112_01359</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Possible subunit of a heme lyase.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the CcmH/CycL/Ccl2/NrfF family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67376.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671167.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01359"/>
    <dbReference type="EnsemblBacteria" id="CTQ67376">
        <property type="protein sequence ID" value="CTQ67376"/>
        <property type="gene ID" value="LAX5112_01359"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.640">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005616">
        <property type="entry name" value="CcmH/CycL/Ccl2/NrfF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038297">
        <property type="entry name" value="CcmH/CycL/NrfF/Ccl2_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03918">
        <property type="entry name" value="CcmH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 5" id="KW-0349">Heme</keyword>
    <keyword evidence="4 5" id="KW-0408">Iron</keyword>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="3 5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0732">Signal</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="5">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5011018446" description="Cytochrome c-type biogenesis protein" evidence="5">
        <location>
            <begin position="22"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="105"/>
            <end position="126"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010342"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU364112"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ67376.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="163" mass="17710" checksum="32B4C7B4159674B5" modified="2015-12-09" version="1">MKRLLACLSLVLCVLSGPGLAISPDEILEDPALETRARALSAELRCMVCQNQSIDDSDAPLAKDLRVLVRERLVAGDTDAQVIDFLVDRYGEFVLLKPRFAWHTFFLWAAGPLALIAGVAAIVITLRRRQTTAAAAGANQPAPKLSAEEEKRLKALLSSKDQS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZC4</accession>
    <name>A0A0M6ZZC4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">30S ribosomal protein S4</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6 11" type="primary">rpsD</name>
        <name evidence="11" type="ORF">LAX5112_01589</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.</text>
    </comment>
    <comment type="function">
        <text evidence="6">With S5 and S12 plays an important role in translational accuracy.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Part of the 30S ribosomal subunit. Contacts protein S5. The interaction surface between S4 and S5 is involved in control of translational fidelity.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 6 7">Belongs to the universal ribosomal protein uS4 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67969.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671372.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01589"/>
    <dbReference type="EnsemblBacteria" id="CTQ67969">
        <property type="protein sequence ID" value="CTQ67969"/>
        <property type="gene ID" value="LAX5112_01589"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015935">
        <property type="term" value="C:small ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00165">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.290.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01306_B">
        <property type="entry name" value="Ribosomal_S4_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022801">
        <property type="entry name" value="Ribosomal_S4/S9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001912">
        <property type="entry name" value="Ribosomal_S4/S9_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005709">
        <property type="entry name" value="Ribosomal_S4_bac-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018079">
        <property type="entry name" value="Ribosomal_S4_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002942">
        <property type="entry name" value="S4_RNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036986">
        <property type="entry name" value="S4_RNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11831">
        <property type="entry name" value="PTHR11831"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11831:SF4">
        <property type="entry name" value="PTHR11831:SF4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00163">
        <property type="entry name" value="Ribosomal_S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01479">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01390">
        <property type="entry name" value="Ribosomal_S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00363">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01017">
        <property type="entry name" value="rpsD_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00632">
        <property type="entry name" value="RIBOSOMAL_S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 6 7" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="4 6 7" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="3 6" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="2 6" id="KW-0699">rRNA-binding</keyword>
    <feature type="domain" description="Ribosomal_S4" evidence="10">
        <location>
            <begin position="3"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="domain" description="S4" evidence="9">
        <location>
            <begin position="94"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="19"/>
            <end position="46"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007465"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003699"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="SMART" id="SM00363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="SMART" id="SM01390"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ67969.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="205" mass="23606" checksum="50001C299DD3A30A" modified="2015-12-09" version="1">MSKRHSVKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKLSDFGVQLRAKQKLKGYYGNISEKQFRKVYAEASRLKGDTSENLIGLLERRLDAVIYRAKFVPTVFAARQFINHGHVKVNGKRVNIPSYQLRPGDVVEVRERSKQLAIVLEAIQSAERDVPDYVDADHAKMTATYSRVPAFSDVPYPVQMEPNLVVEFYSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZH0</accession>
    <name>A0A0M6ZZH0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Flagellar assembly protein FliX</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">fliX</name>
        <name evidence="2" type="ORF">LAX5112_01682</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68228.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008196094.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01682"/>
    <dbReference type="EnsemblBacteria" id="CTQ68228">
        <property type="protein sequence ID" value="CTQ68228"/>
        <property type="gene ID" value="LAX5112_01682"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044781">
        <property type="term" value="P:bacterial-type flagellum organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019704">
        <property type="entry name" value="Flagellar_assmbl_FliX_class2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10768">
        <property type="entry name" value="FliX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0966">Cell projection</keyword>
    <keyword evidence="2" id="KW-0969">Cilium</keyword>
    <keyword evidence="2" id="KW-0282">Flagellum</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="46"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68228.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="140" mass="14841" checksum="AF36E19D3C6BB4E6" modified="2015-12-09" version="1">MRITGSKPLTGVQGRGAKKSSSSGSGFAPDVGGAAEQPTTQATAGGAGIQGIDALLALQEVDERTERRKKAARHGHTLLDSLEMIRADLLAGYVSEDRLEQLSLTVSKRQSSGDPEVDSVLEEIELRVKVELAKLGRFPD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A051</accession>
    <name>A0A0M7A051_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 6">Transcription termination/antitermination protein NusG</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 9" type="primary">nusG</name>
        <name evidence="9" type="ORF">LAX5112_01712</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5 6">Participates in transcription elongation, termination and antitermination.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5 6">Belongs to the NusG family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68365.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008190543.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01712"/>
    <dbReference type="EnsemblBacteria" id="CTQ68365">
        <property type="protein sequence ID" value="CTQ68365"/>
        <property type="gene ID" value="LAX5112_01712"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006354">
        <property type="term" value="P:DNA-templated transcription, elongation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006353">
        <property type="term" value="P:DNA-templated transcription, termination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032784">
        <property type="term" value="P:regulation of DNA-templated transcription, elongation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031564">
        <property type="term" value="P:transcription antitermination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.940">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00948">
        <property type="entry name" value="NusG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005824">
        <property type="entry name" value="KOW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006645">
        <property type="entry name" value="NGN_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036735">
        <property type="entry name" value="NGN_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043425">
        <property type="entry name" value="NusG-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014722">
        <property type="entry name" value="Rib_L2_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001062">
        <property type="entry name" value="Transcrpt_antiterm_NusG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015869">
        <property type="entry name" value="Transcrpt_antiterm_NusG_bac_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008991">
        <property type="entry name" value="Translation_prot_SH3-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30265">
        <property type="entry name" value="PTHR30265"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30265:SF2">
        <property type="entry name" value="PTHR30265:SF2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00467">
        <property type="entry name" value="KOW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02357">
        <property type="entry name" value="NusG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00338">
        <property type="entry name" value="NUSGTNSCPFCT"/>
    </dbReference>
    <dbReference type="SMART" id="SM00739">
        <property type="entry name" value="KOW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00738">
        <property type="entry name" value="NGN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50104">
        <property type="entry name" value="SSF50104"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82679">
        <property type="entry name" value="SSF82679"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00922">
        <property type="entry name" value="nusG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01014">
        <property type="entry name" value="NUSG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5 6" id="KW-0804">Transcription</keyword>
    <keyword evidence="2 5 6" id="KW-0889">Transcription antitermination</keyword>
    <keyword evidence="3 5 6" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="1 5 6" id="KW-0806">Transcription termination</keyword>
    <feature type="domain" description="NGN" evidence="7">
        <location>
            <begin position="2"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="domain" description="KOW" evidence="8">
        <location>
            <begin position="122"/>
            <end position="149"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022472"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022814"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00948"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU000538"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="SMART" id="SM00738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="SMART" id="SM00739"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ68365.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="176" mass="20011" checksum="595637F4FD6E29E4" modified="2015-12-09" version="1">MAKRWYIVHAYSNFEKKVAESIREKAEQKGLSDLFEEILVPMEKVVEVRRGRKVDAERKFFPGYVLVKMDMTNEAFHLIRDTPKVTGFLGADQKPMPIPEKEALRIINQVQEGVDRPKPSVSFEVGEQVRVSDGPFASFSGLVEEVDDERARLKVAVSIFGRATPVELEFGQVDKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A066</accession>
    <name>A0A0M7A066_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Phosphoglycolate phosphatase</fullName>
            <ecNumber evidence="1">3.1.3.18</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">gph_2</name>
        <name evidence="1" type="ORF">LAX5112_01596</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.3.18" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67987.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671378.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01596"/>
    <dbReference type="EnsemblBacteria" id="CTQ67987">
        <property type="protein sequence ID" value="CTQ67987"/>
        <property type="gene ID" value="LAX5112_01596"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008967">
        <property type="term" value="F:phosphoglycolate phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.240">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006439">
        <property type="entry name" value="HAD-SF_hydro_IA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041492">
        <property type="entry name" value="HAD_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023198">
        <property type="entry name" value="PGP-like_dom2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13419">
        <property type="entry name" value="HAD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01549">
        <property type="entry name" value="HAD-SF-IA-v1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67987.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="236" mass="24667" checksum="D8646A8AFFC97C56" modified="2015-12-09" version="1">MAHSIKAVLFDKDGTLLDFDATWAKPQEQAAVFAANGDELLAKRLLVAGGMDTETRKTTAGSLFAAGNALEIAQAFLNEGAPHDLELLTSELDRIFLEGMQKARLLPGLETSLRQLHDTGFILGVASSDSEGSIAAFLNTTRVAALFSFIAGYDSGHGHKPGPGMVEGFARANQIPVHQIAVAGDNTHDLEMAETAGAGLKIGVLSGTGTAADLSPLADLILESCADLSDQVLVRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0A9</accession>
    <name>A0A0M7A0A9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="10">L-cystine transport system permease protein TcyL</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">tcyL</name>
        <name evidence="10" type="ORF">LAX5112_01292</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="8">Cell membrane</location>
            <topology evidence="8">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67253.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671121.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01292"/>
    <dbReference type="EnsemblBacteria" id="CTQ67253">
        <property type="protein sequence ID" value="CTQ67253"/>
        <property type="gene ID" value="LAX5112_01292"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006865">
        <property type="term" value="P:amino acid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010065">
        <property type="entry name" value="AA_ABC_transptr_permease_3TM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043429">
        <property type="entry name" value="ArtM/GltK/GlnP/TcyL/YhdX-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30614">
        <property type="entry name" value="PTHR30614"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01726">
        <property type="entry name" value="HEQRo_perm_3TM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0029">Amino-acid transport</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="8" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="23"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="68"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="92"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="116"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="158"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="193"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="9">
        <location>
            <begin position="23"/>
            <end position="212"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ67253.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="226" mass="24965" checksum="11744B1A2B7A7841" modified="2015-12-09" version="1">MFDLRFFEIYRNPEYLLLLGEGAAVSAFLTVIGGALGFVLATNLAALRHYKVPILAPIAAIYVEFIRNTPLIVQMFFVAFGLPLLLGYQWPFWAHALLALSLNFSAYFAEILRAGLAGIGTGQSEAAAALGLPTWLGFSKILFPQAVAAMFPSLNSQFIFLFLTTGVISEIGVTDLTWAGLYIDSRSFRSFEVFFTLTVIYVLMALSFKALLGLAHDQLFKWKAVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0E7</accession>
    <name>A0A0M7A0E7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Inner membrane protein YohK</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">yohK</name>
        <name evidence="6" type="ORF">LAX5112_01490</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67710.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671301.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01490"/>
    <dbReference type="EnsemblBacteria" id="CTQ67710">
        <property type="protein sequence ID" value="CTQ67710"/>
        <property type="gene ID" value="LAX5112_01490"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007300">
        <property type="entry name" value="CidB/LrgB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30249">
        <property type="entry name" value="PTHR30249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04172">
        <property type="entry name" value="LrgB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="41"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="72"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="102"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="158"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="211"/>
            <end position="235"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ67710.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="239" mass="24875" checksum="66073A03E06F85D6" modified="2015-12-09" version="1">MDGELREIWVYLSASPLLALTLTLVAYQVGFWIYRRAGFNPLLNPVLIAVVLLVSLLLVTDTQYSVYFEGAQFVHFMLGPATVALALPLYRQLERVRRSSIAILASLLAGSLTAAISAVGIAALFGASKETLVSLAPKSVTAPVAMGISEQLGGLPSLTAVLVILTGITGAALGPLLLNLMGVKDMAARGLAIGTASHGIGTARALQVSELAGAFSGLAMGLNALATATLLPLVWKLFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0N7</accession>
    <name>A0A0M7A0N7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Pyridoxal 4-dehydrogenase</fullName>
            <ecNumber evidence="1">1.1.1.107</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">pldh-t</name>
        <name evidence="1" type="ORF">LAX5112_01651</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.1.1.107" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68141.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671417.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01651"/>
    <dbReference type="EnsemblBacteria" id="CTQ68141">
        <property type="protein sequence ID" value="CTQ68141"/>
        <property type="gene ID" value="LAX5112_01651"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050235">
        <property type="term" value="F:pyridoxal 4-dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00106">
        <property type="entry name" value="adh_short"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ68141.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="245" mass="26263" checksum="CA42F0A805DC46F6" modified="2015-12-09" version="1">MGTLNGKTVVITGAGRSTGRALAAALADHGADVHLSARDKAQAEDTCRFIKDVTGSSATAYSCDIADPDSIRQFVLDLKATTPKIDILINSAAVWLSGSFEATDDDHVITAVNSTVTGTILLTKHCLPLLEMSEEADIKTIVSKSGLALDGQSEPNAAYHATKSAQTAFMNRLRQTHPHIRVMSVFPPDFESDLEYKSSAWFKRPSPGTNRTMTARHVVEAILFALEQDRICSVESLVLSNSASG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A143</accession>
    <name>A0A0M7A143_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Methyl viologen resistance protein C</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">emrE</name>
        <name evidence="6" type="ORF">LAX5112_01875</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cell membrane</location>
            <topology evidence="4">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the drug/metabolite transporter (DMT) superfamily. Small multidrug resistance (SMR) (TC 2.A.7.1) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68758.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671575.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01875"/>
    <dbReference type="EnsemblBacteria" id="CTQ68758">
        <property type="protein sequence ID" value="CTQ68758"/>
        <property type="gene ID" value="LAX5112_01875"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042221">
        <property type="term" value="P:response to chemical"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000390">
        <property type="entry name" value="Small_drug/metabolite_transptr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045324">
        <property type="entry name" value="Small_multidrug_res"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30561">
        <property type="entry name" value="PTHR30561"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00893">
        <property type="entry name" value="Multi_Drug_Res"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="3 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="39"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="63"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="90"/>
            <end position="109"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003942"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ68758.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="115" mass="12194" checksum="988C23ACAAD36DDF" modified="2015-12-09" version="1">MPAPTAATYVFLAAAILAEVIATSALARAENFTRFWPSIITVVGYAISFWCLSYPIRVLPTGIVYAVWSGAGIVLITMVAWLVFGQKLDLPAVLGLGLILAGVIVINVFSKSVGH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A164</accession>
    <name>A0A0M7A164_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Gcv operon activator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">gcvA_5</name>
        <name evidence="3" type="ORF">LAX5112_01425</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67544.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671255.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01425"/>
    <dbReference type="EnsemblBacteria" id="CTQ67544">
        <property type="protein sequence ID" value="CTQ67544"/>
        <property type="gene ID" value="LAX5112_01425"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00039">
        <property type="entry name" value="HTHLYSR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="9"/>
            <end position="66"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ67544.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="292" mass="31959" checksum="8AE938AF76F8BC08" modified="2015-12-09" version="1">MESRRKKLPPLDTLVFFDTALRAGSFSAAASDLYVSQAAVSKRVKQLENWLGADLFERGARSLKPTQAGAQLADPVAMALDYLQGALDQVRSPAASSVRIAANSAVSVFWLFERLRSFALSSASCPVETVVKDDPRDLLAASNDLAIIYADKVPEGWEGHLLMDEELAPVASPAEAERFANAPQNSSLLDYHRHAPDWINWDVWQQREHQSGFHGLSKTLCQNYSHSIGLALEGKGIALASCSFLQADLASGRLLMLVDKPLKTGKGYFLVWQGAKARRPEIENLAKHLSLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1F9</accession>
    <name>A0A0M7A1F9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">pleC_2</name>
        <name evidence="8" type="ORF">LAX5112_01927</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68898.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671618.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01927"/>
    <dbReference type="EnsemblBacteria" id="CTQ68898">
        <property type="protein sequence ID" value="CTQ68898"/>
        <property type="gene ID" value="LAX5112_01927"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="6" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0808">Transferase</keyword>
    <keyword evidence="6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="60"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="86"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="124"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="147"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="176"/>
            <end position="193"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="199"/>
            <end position="222"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="7">
        <location>
            <begin position="269"/>
            <end position="490"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="4">
        <location>
            <begin position="228"/>
            <end position="255"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ68898.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="516" mass="57203" checksum="AC22D995E7A7E1EB" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1T6</accession>
    <name>A0A0M7A1T6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01787</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68561.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ68561">
        <property type="protein sequence ID" value="CTQ68561"/>
        <property type="gene ID" value="LAX5112_01787"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022224">
        <property type="entry name" value="DUF3750"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12570">
        <property type="entry name" value="DUF3750"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ68561.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="254" mass="28042" checksum="F4DA50FD0FEC0F6F" modified="2015-12-09" version="1">MRRLLIWSACFILFNLALGLTTYMSGVRSPDTHWSTANREPIGIAPDPRTEQQAIVQVYAARAFSWRGYFGVHSWISVKPANADHFTTYEVTGWRVRYGGNAVRASRRAPDSRWFGSEPELLAELRGEPAREAIVRLQIAVDAYEFNSIYTVWPGPNSNTFIAHLGRVLPELRLDLPPTAVGKDYLASGLWAPAPSGTGYQLSLMGLFGVLVAWEEGLELNILGLTYGIDLNDLSLKLPMIGRIGFSSGNTPSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1X8</accession>
    <name>A0A0M7A1X8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Methylmalonate-semialdehyde dehydrogenase [acylating]</fullName>
            <ecNumber evidence="4">1.2.1.27</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">mmsA</name>
        <name evidence="4" type="ORF">LAX5112_01905</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.2.1.27" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68839.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671599.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01905"/>
    <dbReference type="EnsemblBacteria" id="CTQ68839">
        <property type="protein sequence ID" value="CTQ68839"/>
        <property type="gene ID" value="LAX5112_01905"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004491">
        <property type="term" value="F:methylmalonate-semialdehyde dehydrogenase (acylating) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd07085">
        <property type="entry name" value="ALDH_F6_MMSDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.309.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.605.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016161">
        <property type="entry name" value="Ald_DH/histidinol_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016163">
        <property type="entry name" value="Ald_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016160">
        <property type="entry name" value="Ald_DH_CS_CYS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016162">
        <property type="entry name" value="Ald_DH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015590">
        <property type="entry name" value="Aldehyde_DH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010061">
        <property type="entry name" value="MeMal-semiAld_DH"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43866">
        <property type="entry name" value="PTHR43866"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00171">
        <property type="entry name" value="Aldedh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53720">
        <property type="entry name" value="SSF53720"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01722">
        <property type="entry name" value="MMSDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00070">
        <property type="entry name" value="ALDEHYDE_DEHYDR_CYS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 4" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aldedh" evidence="3">
        <location>
            <begin position="15"/>
            <end position="479"/>
        </location>
    </feature>
    <feature type="active site" evidence="2">
        <location>
            <position position="281"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ68839.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="499" mass="53685" checksum="3A611B27A4057704" modified="2015-12-09" version="1">MEKIGHFIGGKQVEGTSGRYADVFNPATGEVQAQVALATTAELEAAVANAAAAQPAWAAQNPQKRARVMMKFVDLINRDMDKLAEKLSSEHGKTFVDAKGDVQRGLEVIEFCIGAPHLLKGEFTDSAGPGIDMYSMRQPLGVVAGITPFNFPAMIPLWKMGPALVAGNAMIMKPSERDPSVPMMLAELLKEAGLPDGVLNVVNGDKESVDAILDNPTIQAVGFVGSTPIAHYIYHRAAENGKRAQCFGGAKNHMIIMPDADMDQAADALVGAGYGAAGERCMAISVAVPVGDETADRLIEKLVPRVEALKVGPWTAGDDIDFGPVVTKAAQENILRLIKSGVDQGAKLVVDNRDFSMQGYENGFFVGPHLFDHVTKDMDIYKTEIFGPVLSTVRAKTYEEAIGLAMDHEYGNGTAIFTRDGDTARDFANRINIGMVGINVPIPVPLAYHTFGGWKKSGFGDLNQHGPDAFKFYTRTKTVTSRWPSGIRQGAEFSIPTMK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1Y9</accession>
    <name>A0A0M7A1Y9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">7-cyano-7-deazaguanine synthase</fullName>
            <ecNumber evidence="2">6.3.4.20</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="2">7-cyano-7-carbaguanine synthase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="2">PreQ(0) synthase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="2">Queuosine biosynthesis protein QueC</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="2 3" type="primary">queC</name>
        <name evidence="3" type="ORF">LAX5112_01986</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Catalyzes the ATP-dependent conversion of 7-carboxy-7-deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>7-carboxy-7-deazaguanine + ATP + NH4(+) = 7-cyano-7-deazaguanine + ADP + H(+) + H2O + phosphate</text>
            <dbReference type="Rhea" id="RHEA:27982"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:45075"/>
            <dbReference type="ChEBI" id="CHEBI:61036"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.4.20"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="2">Binds 1 zinc ion per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2">Purine metabolism; 7-cyano-7-deazaguanine biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the QueC family.</text>
    </comment>
    <dbReference type="EC" id="6.3.4.20" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69108.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01986"/>
    <dbReference type="EnsemblBacteria" id="CTQ69108">
        <property type="protein sequence ID" value="CTQ69108"/>
        <property type="gene ID" value="LAX5112_01986"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00391"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016879">
        <property type="term" value="F:ligase activity, forming carbon-nitrogen bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008616">
        <property type="term" value="P:queuosine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01995">
        <property type="entry name" value="ExsB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01633">
        <property type="entry name" value="QueC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018317">
        <property type="entry name" value="QueC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42914">
        <property type="entry name" value="PTHR42914"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06508">
        <property type="entry name" value="QueC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006293">
        <property type="entry name" value="ExsB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00364">
        <property type="entry name" value="TIGR00364"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 3" id="KW-0436">Ligase</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="1 2" id="KW-0671">Queuosine biosynthesis</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0862">Zinc</keyword>
    <feature type="binding site" evidence="2">
        <location>
            <begin position="7"/>
            <end position="17"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="185"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="193"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="196"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="199"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022785"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01633"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ69108.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="229" mass="24987" checksum="0268879D980625BA" modified="2015-12-09" version="1">MKTLVICSGGMDSVTLAHKIAQENELIGLISFDYGQRHKKELDYAKACADALNTEHILIDITNIGRQLTGSALTDNIDVPDGHYAEDTMKITVVPNRNAIMLTIAYGIASARGAEAVATAVHGGDHFIYPDCRPAFTESFEEMQRNALEGMGEIKLYTPYVHVSKADIAAEGVRFGVDHTKSWSCYKGGDIHCGRCGTCVERREAFHLAGVDDPTTYADPNFWKGACNV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A263</accession>
    <name>A0A0M7A263_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">2-hydroxy-3-oxopropionate reductase</fullName>
            <ecNumber evidence="4">1.1.1.60</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">garR</name>
        <name evidence="4" type="ORF">LAX5112_01938</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.1.1.60" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68929.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671682.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01938"/>
    <dbReference type="EnsemblBacteria" id="CTQ68929">
        <property type="protein sequence ID" value="CTQ68929"/>
        <property type="gene ID" value="LAX5112_01938"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008679">
        <property type="term" value="F:2-hydroxy-3-oxopropionate reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050661">
        <property type="term" value="F:NADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016054">
        <property type="term" value="P:organic acid catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1040.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008927">
        <property type="entry name" value="6-PGluconate_DH-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013328">
        <property type="entry name" value="6PGD_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006115">
        <property type="entry name" value="6PGDH_NADP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015815">
        <property type="entry name" value="HIBADH-related"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029154">
        <property type="entry name" value="NADP-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14833">
        <property type="entry name" value="NAD_binding_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03446">
        <property type="entry name" value="NAD_binding_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000103">
        <property type="entry name" value="HIBADH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48179">
        <property type="entry name" value="SSF48179"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NAD_binding_2" evidence="2">
        <location>
            <begin position="3"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="domain" description="NAD_binding_11" evidence="3">
        <location>
            <begin position="167"/>
            <end position="285"/>
        </location>
    </feature>
    <feature type="active site" evidence="1">
        <location>
            <position position="173"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRSR" id="PIRSR000103-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF03446"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF14833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ68929.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="293" mass="31096" checksum="34F74F85A57774C8" modified="2015-12-09" version="1">MAKVAFIGLGVMGYPMAGFLKTKGGHDVTVYNRTTAKAEKWAAEYGGAFAKTPQEAAEGCDFVFCCVGNDDDLRSVTTGPDGAFHSLKDGAIFIDNTTASAEVARELYEAAKAKGCGFIDAPVSGGQAGAENGVLTVMCGGDQDVFDKAKPVIDCFSKFVGLMGPSGAGQLTKMCNQICIAGLVQGLSEAVHFAEKADLDVETVISAIRGGAAQSWQMENRWETMRDGKFDYGFAVDWMRKDLGICLKTASDTGARLPVTALVDQFYAEVQAMGGNRWDTSSLVARLRNADKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A328</accession>
    <name>A0A0M7A328_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Peptidyl-prolyl cis-trans isomerase</fullName>
            <ecNumber evidence="6">5.2.1.8</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">fbp</name>
        <name evidence="10" type="ORF">LAX5112_01897</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 5 6">
            <text>[protein]-peptidylproline (omega=180) = [protein]-peptidylproline (omega=0)</text>
            <dbReference type="Rhea" id="RHEA:16237"/>
            <dbReference type="Rhea" id="RHEA-COMP:10747"/>
            <dbReference type="Rhea" id="RHEA-COMP:10748"/>
            <dbReference type="ChEBI" id="CHEBI:83833"/>
            <dbReference type="ChEBI" id="CHEBI:83834"/>
            <dbReference type="EC" id="5.2.1.8"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the FKBP-type PPIase family.</text>
    </comment>
    <dbReference type="EC" id="5.2.1.8" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68816.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671678.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01897"/>
    <dbReference type="EnsemblBacteria" id="CTQ68816">
        <property type="protein sequence ID" value="CTQ68816"/>
        <property type="gene ID" value="LAX5112_01897"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003755">
        <property type="term" value="F:peptidyl-prolyl cis-trans isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007049">
        <property type="term" value="P:cell cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.50.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.250.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046357">
        <property type="entry name" value="PPIase_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001179">
        <property type="entry name" value="PPIase_FKBP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001763">
        <property type="entry name" value="Rhodanese-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036873">
        <property type="entry name" value="Rhodanese-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00254">
        <property type="entry name" value="FKBP_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00581">
        <property type="entry name" value="Rhodanese"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00450">
        <property type="entry name" value="RHOD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52821">
        <property type="entry name" value="SSF52821"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50059">
        <property type="entry name" value="FKBP_PPIASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50206">
        <property type="entry name" value="RHODANESE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="2" id="KW-0132">Cell division</keyword>
    <keyword evidence="5 6 10" id="KW-0413">Isomerase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 5 6" id="KW-0697">Rotamase</keyword>
    <keyword evidence="7" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="7">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809207" description="Peptidyl-prolyl cis-trans isomerase" evidence="7">
        <location>
            <begin position="21"/>
            <end position="254"/>
        </location>
    </feature>
    <feature type="domain" description="PPIase FKBP-type" evidence="8">
        <location>
            <begin position="40"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="domain" description="Rhodanese" evidence="9">
        <location>
            <begin position="144"/>
            <end position="244"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000971"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003915"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50059"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50206"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ68816.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="254" mass="27350" checksum="8BF6326DCC3C92DF" modified="2015-12-09" version="1">MIKWIAHILAATLFILPAAAQEELQIKDIEKGTGEEANVGETVVVHYTGWLMDGTKFDSSLDRGTPFSFTLGERRVIPGWEQGVEGMQVGGKRELIIPPHLAYGASGAGGVIPPNATLKFEIELLDVKGKKFSELNNDQLKERLAAGATVIDIRRPDEWKQTGVIPGTHLVTFFDASGNPNPNFGKELQSLISGPGDEVIFLCRTGARSKALSEYLAGQAGFTQVANVTQGITSWISGGGNVTEAVQPENCWLC</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3I0</accession>
    <name>A0A0M7A3I0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Putative phosphonates utilization ATP-binding protein PhnK</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">phnK</name>
        <name evidence="6" type="ORF">LAX5112_02185</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69618.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671827.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02185"/>
    <dbReference type="EnsemblBacteria" id="CTQ69618">
        <property type="protein sequence ID" value="CTQ69618"/>
        <property type="gene ID" value="LAX5112_02185"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012700">
        <property type="entry name" value="CP_lyase_PhnK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF037116">
        <property type="entry name" value="CP_lyase_PhnK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02323">
        <property type="entry name" value="CP_lyasePhnK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="11"/>
            <end position="256"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="43"/>
            <end position="50"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ69618.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="262" mass="29292" checksum="A2F90B3A7CEA3D36" modified="2015-12-09" version="1">MNVFRADDPLLQVHNVTRYYGDRIGCTDVSFDLWPGEVLAIVGESGSGKTTLLNCLSTRLAPTAGAIEYRMRDGSMRNLYQLSEAERRLLMRTDWGFVHQNAADGLRMNVSAGANVGERLMAVGDRHYGKIRETADDWLGRVEITSDRIDDNPRSFSGGMRQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRRLVADLGLSVVIVTHDLAVARLLSHRIMVMRHGRVIEAGLTDQVLDDPREPYTQLLVSSILQV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3T2</accession>
    <name>A0A0M7A3T2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Anaerobic benzoate catabolism transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01999</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69142.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008192375.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01999"/>
    <dbReference type="EnsemblBacteria" id="CTQ69142">
        <property type="protein sequence ID" value="CTQ69142"/>
        <property type="gene ID" value="LAX5112_01999"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="SMART" id="SM00530">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="1">
        <location>
            <begin position="8"/>
            <end position="66"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69142.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="123" mass="13456" checksum="343B7D6209C96C99" modified="2015-12-09" version="1">MTPLGAKIRELRTKQGVSLKEMAAALSVSSAYLSALEHGKRGKPTWFLVQRIIAYFNVIWDEAEEIQRLAELSDPRITIDTAGMNPKATELANQLALKIGGLSDASLEGLLHQLRVAAVKDDI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A478</accession>
    <name>A0A0M7A478_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02038</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69236.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02038"/>
    <dbReference type="EnsemblBacteria" id="CTQ69236">
        <property type="protein sequence ID" value="CTQ69236"/>
        <property type="gene ID" value="LAX5112_02038"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032710">
        <property type="entry name" value="NTF2-like_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54427">
        <property type="entry name" value="SSF54427"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ69236.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="96" mass="11204" checksum="BE52249CAD6F4BD4" modified="2015-12-09" version="1">MRSRYTAYMRENIAYLKETLWPKYQAGFDFAATARWASENHWTGLSVLETGKGSETDRDGTVLFEAKFLSGGTLHTHRENSRFRKKSGRWYYVEAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4D3</accession>
    <name>A0A0M7A4D3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">PhoD-like phosphatase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02119</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69451.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671778.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02119"/>
    <dbReference type="EnsemblBacteria" id="CTQ69451">
        <property type="protein sequence ID" value="CTQ69451"/>
        <property type="gene ID" value="LAX5112_02119"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.21.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029052">
        <property type="entry name" value="Metallo-depent_PP-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038607">
        <property type="entry name" value="PhoD-like_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56300">
        <property type="entry name" value="SSF56300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ69451.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="669" mass="75010" checksum="4ED6A57530A43F19" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4V4</accession>
    <name>A0A0M7A4V4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase</fullName>
            <shortName evidence="1">PRPn C-P lyase</shortName>
            <ecNumber evidence="1">4.7.1.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">phnJ</name>
        <name evidence="3" type="ORF">LAX5112_02186</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Catalyzes the breakage of the C-P bond in alpha-D-ribose 1-methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>AH2 + alpha-D-ribose 1-methylphosphonate 5-phosphate + S-adenosyl-L-methionine = 5'-deoxyadenosine + A + alpha-D-ribose 1,2-cyclic phosphate 5-phosphate + H(+) + L-methionine + methane</text>
            <dbReference type="Rhea" id="RHEA:34707"/>
            <dbReference type="ChEBI" id="CHEBI:13193"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16183"/>
            <dbReference type="ChEBI" id="CHEBI:17319"/>
            <dbReference type="ChEBI" id="CHEBI:17499"/>
            <dbReference type="ChEBI" id="CHEBI:57844"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:68686"/>
            <dbReference type="ChEBI" id="CHEBI:68687"/>
            <dbReference type="EC" id="4.7.1.1"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the PhnJ family.</text>
    </comment>
    <dbReference type="EC" id="4.7.1.1" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69621.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671828.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02186"/>
    <dbReference type="EnsemblBacteria" id="CTQ69621">
        <property type="protein sequence ID" value="CTQ69621"/>
        <property type="gene ID" value="LAX5112_02186"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0098848">
        <property type="term" value="F:alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019700">
        <property type="term" value="P:organic phosphonate catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010306">
        <property type="entry name" value="PhnJ"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06007">
        <property type="entry name" value="PhnJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF011468">
        <property type="entry name" value="PhnJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDF00379">
        <property type="entry name" value="Phosphonate_metabolism_(PhnJ)"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="1" id="KW-0408">Iron</keyword>
    <keyword evidence="1" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="1 3" id="KW-0456">Lyase</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="291"/>
            <end position="311"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRNR" id="PIRNR011468"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ69621.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="311" mass="35125" checksum="57C403C704AA45AB" modified="2015-12-09" version="1">MNATAQIFDQGEYNFAYLDEQTKRMIRRAILKGIAIPGYQVPFASREMPMPYGWGTGGVQVTASILGKDDCLKMIDQGSDDTTNAVSLRGFFEKTANVRTTYETSEATVIQTRHRIPEKELREDQVLVFQVPIPEPLRFLEPRETETRKMHALEDYGLMHVKLYEDIAKNGHIATTYAYPVMVNDRYVMDPSPTPKFDNPKIDEMAALQLYGAGREKRIYAIPPYTKVKSLDFEDYPFEVQKFDKPCGLCGAEHVYLDEVILDDKGGRMFVCSDSDYCEERRTAGHVGPMAANPASQHIGGHGTNTEEASR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A583</accession>
    <name>A0A0M7A583_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Bacteriophytochrome cph2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">cph2_9</name>
        <name evidence="6" type="ORF">LAX5112_02338</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70059.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671962.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02338"/>
    <dbReference type="EnsemblBacteria" id="CTQ70059">
        <property type="protein sequence ID" value="CTQ70059"/>
        <property type="gene ID" value="LAX5112_02338"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01948">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01949">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00130">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.450">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001633">
        <property type="entry name" value="EAL_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035919">
        <property type="entry name" value="EAL_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000160">
        <property type="entry name" value="GGDEF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001610">
        <property type="entry name" value="PAC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000014">
        <property type="entry name" value="PAS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000700">
        <property type="entry name" value="PAS-assoc_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035965">
        <property type="entry name" value="PAS-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013655">
        <property type="entry name" value="PAS_fold_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00563">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00990">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08447">
        <property type="entry name" value="PAS_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13426">
        <property type="entry name" value="PAS_9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00052">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00267">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00086">
        <property type="entry name" value="PAC"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00091">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141868">
        <property type="entry name" value="SSF141868"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55785">
        <property type="entry name" value="SSF55785"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00254">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00229">
        <property type="entry name" value="sensory_box"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50883">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50887">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50113">
        <property type="entry name" value="PAC"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50112">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="41"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="294"/>
            <end position="317"/>
        </location>
    </feature>
    <feature type="domain" description="PAC" evidence="3">
        <location>
            <begin position="425"/>
            <end position="477"/>
        </location>
    </feature>
    <feature type="domain" description="PAS" evidence="2">
        <location>
            <begin position="474"/>
            <end position="517"/>
        </location>
    </feature>
    <feature type="domain" description="PAC" evidence="3">
        <location>
            <begin position="549"/>
            <end position="599"/>
        </location>
    </feature>
    <feature type="domain" description="GGDEF" evidence="5">
        <location>
            <begin position="635"/>
            <end position="766"/>
        </location>
    </feature>
    <feature type="domain" description="EAL" evidence="4">
        <location>
            <begin position="775"/>
            <end position="1030"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50112"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50113"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ70059.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="1037" mass="115642" checksum="C2A242CFD699C629" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5S3</accession>
    <name>A0A0M7A5S3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 11">Tyrosine recombinase XerD</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11 15" type="primary">xerD</name>
        <name evidence="15" type="ORF">LAX5112_02262</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11">Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC-XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.</text>
    </comment>
    <comment type="subunit">
        <text evidence="11">Forms a cyclic heterotetrameric complex composed of two molecules of XerC and two molecules of XerD.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 11">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 11">Belongs to the 'phage' integrase family. XerD subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69812.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671885.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02262"/>
    <dbReference type="EnsemblBacteria" id="CTQ69812">
        <property type="protein sequence ID" value="CTQ69812"/>
        <property type="gene ID" value="LAX5112_02262"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009037">
        <property type="term" value="F:tyrosine-based site-specific recombinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007049">
        <property type="term" value="P:cell cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007059">
        <property type="term" value="P:chromosome segregation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.130">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.443.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01808">
        <property type="entry name" value="Recomb_XerC_XerD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01807">
        <property type="entry name" value="Recomb_XerD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044068">
        <property type="entry name" value="CB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011010">
        <property type="entry name" value="DNA_brk_join_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013762">
        <property type="entry name" value="Integrase-like_cat_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002104">
        <property type="entry name" value="Integrase_catalytic"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010998">
        <property type="entry name" value="Integrase_recombinase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004107">
        <property type="entry name" value="Integrase_SAM-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011932">
        <property type="entry name" value="Recomb_XerD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023009">
        <property type="entry name" value="Tyrosine_recombinase_XerC/XerD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02899">
        <property type="entry name" value="Phage_int_SAM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00589">
        <property type="entry name" value="Phage_integrase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56349">
        <property type="entry name" value="SSF56349"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02225">
        <property type="entry name" value="recomb_XerD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51900">
        <property type="entry name" value="CB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51898">
        <property type="entry name" value="TYR_RECOMBINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10 11" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="5 11" id="KW-0132">Cell division</keyword>
    <keyword evidence="6 11" id="KW-0159">Chromosome partition</keyword>
    <keyword evidence="4 11" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7 11" id="KW-0229">DNA integration</keyword>
    <keyword evidence="9 11" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="8 11 12" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Core-binding (CB)" evidence="14">
        <location>
            <begin position="1"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="domain" description="Tyr recombinase" evidence="13">
        <location>
            <begin position="105"/>
            <end position="299"/>
        </location>
    </feature>
    <feature type="active site" evidence="11">
        <location>
            <position position="155"/>
        </location>
    </feature>
    <feature type="active site" evidence="11">
        <location>
            <position position="179"/>
        </location>
    </feature>
    <feature type="active site" evidence="11">
        <location>
            <position position="251"/>
        </location>
    </feature>
    <feature type="active site" evidence="11">
        <location>
            <position position="254"/>
        </location>
    </feature>
    <feature type="active site" evidence="11">
        <location>
            <position position="277"/>
        </location>
    </feature>
    <feature type="active site" description="O-(3'-phospho-DNA)-tyrosine intermediate" evidence="11">
        <location>
            <position position="286"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010450"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00015810"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022908"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01807"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01248"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS51898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS51900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="CTQ69812.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="307" mass="34001" checksum="F8E5862AA1CBD76F" modified="2015-12-09" version="1">MATGFDLEHFLEMLAAERGAAENTLAGYRRDLEDFSGFLGQTKLAEADSDHISRYMSDLTRRGYAETSQARRLSALKQFYKFLYSEGSRQDDPTRTLSAPKKRGSLPKVLSMDDVDRLIETARQQTKVSHKSAAAALRAQRMYTLIEVLYATGLRVSELVALPVTAALRDARLIEIKGKGGKERLVPLSHAAQSALKMYVGLRSAEGAYENSPWLFPSHGGSGHLTRQHFGRDLKDLAIAAGLDASKVSPHVLRHAFASHLLQNGADLRVVQQLLGHADISTTQIYTHVLDERLRELVETAHPLARK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5V6</accession>
    <name>A0A0M7A5V6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02275</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69842.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02275"/>
    <dbReference type="EnsemblBacteria" id="CTQ69842">
        <property type="protein sequence ID" value="CTQ69842"/>
        <property type="gene ID" value="LAX5112_02275"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021457">
        <property type="entry name" value="DUF3108"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11306">
        <property type="entry name" value="DUF3108"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ69842.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="302" mass="32268" checksum="A251AADF431F2EFB" modified="2015-12-09" version="1">MLLLTLRNILGAGARTPPAVRRGGFEVIGIKSIGRIAVLPFLAAALLVTPAHAKKSTVGGIYSISIAGFKVARGTLSLVMQGNAYSAKVNMEPAGIGTLFSTGKGGAEASGWLVGSKVVPSKYRMASHAANLDFYVNLNQGSGNIRSMEVTPQFKPNAERIKVTNRHRRNAMDPLSAALMPVRRAKDSLGPKACSRKLPIFDGWTRFDIKLSYQGTKEVSGRGYDGPVVVCKAKWVPVAGHRPSKASVKYMAKAPMEIWLAPMGRDNVLVPYRISIATKNGRLLVEASKLNIGGIGSDQAAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A712</accession>
    <name>A0A0M7A712_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Protoporphyrinogen IX dehydrogenase [menaquinone]</fullName>
            <ecNumber evidence="7">1.3.5.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">hemG</name>
        <name evidence="7" type="ORF">LAX5112_02662</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </cofactor>
    </comment>
    <dbReference type="EC" id="1.3.5.3" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70945.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672230.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02662"/>
    <dbReference type="EnsemblBacteria" id="CTQ70945">
        <property type="protein sequence ID" value="CTQ70945"/>
        <property type="gene ID" value="LAX5112_02662"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010181">
        <property type="term" value="F:FMN binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.360">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008254">
        <property type="entry name" value="Flavodoxin/NO_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026816">
        <property type="entry name" value="Flavodoxin_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029039">
        <property type="entry name" value="Flavoprotein-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12724">
        <property type="entry name" value="Flavodoxin_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52218">
        <property type="entry name" value="SSF52218"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50902">
        <property type="entry name" value="FLAVODOXIN_LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="3" id="KW-0288">FMN</keyword>
    <keyword evidence="5" id="KW-0520">NAD</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Flavodoxin-like" evidence="6">
        <location>
            <begin position="7"/>
            <end position="170"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50902"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ70945.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="178" mass="19568" checksum="3F74C02737A3152E" modified="2015-12-09" version="1">MGAAVKFLIVYASTEGQTNKIAKFMAGLLTNAGHQVRFHNVSDVSDGLTITDYDHVIVAGSVHSGKHQPDLQLFVYANRERLNKLPSLLVSVSLAAAFPDTQSEAQGYVDTFLETTEWQPTHTLLTAGAIKPGIYDWFQKSALLEGDLAAHIDEDLSDTREFTDWDALKQKTVEITTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7E8</accession>
    <name>A0A0M7A7E8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Heat shock protein 33</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">hslO</name>
        <name evidence="6" type="ORF">LAX5112_02545</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70541.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672114.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02545"/>
    <dbReference type="EnsemblBacteria" id="CTQ70541">
        <property type="protein sequence ID" value="CTQ70541"/>
        <property type="gene ID" value="LAX5112_02545"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051082">
        <property type="term" value="F:unfolded protein binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006457">
        <property type="term" value="P:protein folding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00498">
        <property type="entry name" value="Hsp33"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.480">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.55.30.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1280.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000397">
        <property type="entry name" value="Heat_shock_Hsp33"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016154">
        <property type="entry name" value="Heat_shock_Hsp33_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016153">
        <property type="entry name" value="Heat_shock_Hsp33_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023212">
        <property type="entry name" value="Hsp33_helix_hairpin_bin_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30111">
        <property type="entry name" value="PTHR30111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01430">
        <property type="entry name" value="HSP33"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005261">
        <property type="entry name" value="Heat_shock_Hsp33"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF118352">
        <property type="entry name" value="SSF118352"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64397">
        <property type="entry name" value="SSF64397"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0143">Chaperone</keyword>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="5" id="KW-0676">Redox-active center</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0346">Stress response</keyword>
    <keyword evidence="2" id="KW-0862">Zinc</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ70541.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="324" mass="35577" checksum="5C767ADAED56AF59" modified="2015-12-09" version="1">MALNLEELGIKPAGLDAVRPFAVEGLDVRGRSVALGPILQKILGRHDYPEPVSRLLAEAIVLTSLLGTSLKFDGRFTLQTQTQGPVSMLVVDFETPDAIRACATFDAERIAGLIDAGTATPEALLGHGHLAMTIDQGKHMQRYQGLVELNGISLEEVARRYFERSEQIPTEVRLAVGELYTRQDGDAPVKSWTGGGLLIQFLPEAPERMRQADIDPGDAPEGAVRHFIDEDDAWVEAKALVDTVKDVELTDPEVSVETLLYRLFHERGVRLFDAQPIADKCRCSRDKVANVLANFSADEVEAVTVDGKIVVTCEFCSTAYEFDR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7H8</accession>
    <name>A0A0M7A7H8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Cyclic di-GMP phosphodiesterase response regulator RpfG</fullName>
            <ecNumber evidence="4">3.1.4.52</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">rpfG_2</name>
        <name evidence="4" type="ORF">LAX5112_02699</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.4.52" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71048.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02699"/>
    <dbReference type="EnsemblBacteria" id="CTQ71048">
        <property type="protein sequence ID" value="CTQ71048"/>
        <property type="gene ID" value="LAX5112_02699"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071111">
        <property type="term" value="F:cyclic-guanylate-specific phosphodiesterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00077">
        <property type="entry name" value="HDc"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.450.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003018">
        <property type="entry name" value="GAF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029016">
        <property type="entry name" value="GAF-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003607">
        <property type="entry name" value="HD/PDEase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006674">
        <property type="entry name" value="HD_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037522">
        <property type="entry name" value="HD_GYP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029151">
        <property type="entry name" value="Sensor-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01590">
        <property type="entry name" value="GAF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01966">
        <property type="entry name" value="HD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00065">
        <property type="entry name" value="GAF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00471">
        <property type="entry name" value="HDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103190">
        <property type="entry name" value="SSF103190"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51832">
        <property type="entry name" value="HD_GYP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="2">
        <location>
            <begin position="383"/>
            <end position="436"/>
        </location>
    </feature>
    <feature type="domain" description="HD-GYP" evidence="3">
        <location>
            <begin position="761"/>
            <end position="966"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51832"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ71048.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="980" mass="108717" checksum="BA90E0DB736672A6" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7K9</accession>
    <name>A0A0M7A7K9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Extracytoplasmic solute receptor protein</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">TRAP transporter</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6" type="primary">yiaO_4</name>
        <name evidence="6" type="ORF">LAX5112_02709</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Part of the tripartite ATP-independent periplasmic (TRAP) transport system.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the bacterial solute-binding protein 7 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71078.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672264.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02709"/>
    <dbReference type="EnsemblBacteria" id="CTQ71078">
        <property type="protein sequence ID" value="CTQ71078"/>
        <property type="gene ID" value="LAX5112_02709"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031317">
        <property type="term" value="C:tripartite ATP-independent periplasmic transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071702">
        <property type="term" value="P:organic substance transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.190.170">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018389">
        <property type="entry name" value="DctP_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026289">
        <property type="entry name" value="SBP_TakP-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006311">
        <property type="entry name" value="TAT_signal"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038404">
        <property type="entry name" value="TRAP_DctP_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33376">
        <property type="entry name" value="PTHR33376"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03480">
        <property type="entry name" value="DctP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF039026">
        <property type="entry name" value="SiaP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3" id="KW-0574">Periplasm</keyword>
    <keyword evidence="6" id="KW-0675">Receptor</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="binding site" evidence="4 5">
        <location>
            <position position="164"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="185"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="222"/>
        </location>
        <ligand>
            <name>a metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:25213"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="248"/>
        </location>
        <ligand>
            <name>a metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:25213"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRNR" id="PIRNR039026"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR039026-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR039026-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ71078.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="369" mass="39805" checksum="F187EA579451D8A6" modified="2015-12-09" version="1">MSDALKHKKSVSRRDLLVGSAVGSASVLSAPALMAQGAVTEWKLVTSWPKNLPGPGVTAQRIADQVALLSGGAFKIRLFAAGELVPALGVFDAVSNGTADMAHTASFFWQGKIPASVYFTAVPFGLLPHEHISWIEQGGGQALWDELYAPFGIKPVMAGNTGVQMGGWYKKPLQGLDDLRGLKIRMPGLGGEVMRRLGAAPAGLPPGELFQALQTGVLDATEFLGPWSDRAMGFQKAARYYYSPGFHEPNGTGEALFNQAAYDALPTEFQAILIEACRAENGRALAESDWENAGSLKLLQQKDGVEVLTYPEDILEALRVTTGEVLLDTSRQDPMSNRIYQSHQAALKRLSAWSDIAMRRFLSARDGFV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7P7</accession>
    <name>A0A0M7A7P7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DNA-3-methyladenine glycosylase</fullName>
            <ecNumber evidence="2">3.2.2.21</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">alkA</name>
        <name evidence="2" type="ORF">LAX5112_02236</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.2.2.21" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69753.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671865.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02236"/>
    <dbReference type="EnsemblBacteria" id="CTQ69753">
        <property type="protein sequence ID" value="CTQ69753"/>
        <property type="gene ID" value="LAX5112_02236"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008725">
        <property type="term" value="F:DNA-3-methyladenine glycosylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052822">
        <property type="term" value="F:DNA-3-methylguanine glycosylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052821">
        <property type="term" value="F:DNA-7-methyladenine glycosylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043916">
        <property type="term" value="F:DNA-7-methylguanine glycosylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006284">
        <property type="term" value="P:base-excision repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00056">
        <property type="entry name" value="ENDO3c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011257">
        <property type="entry name" value="DNA_glycosylase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003265">
        <property type="entry name" value="HhH-GPD_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00730">
        <property type="entry name" value="HhH-GPD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00478">
        <property type="entry name" value="ENDO3c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48150">
        <property type="entry name" value="SSF48150"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ENDO3c" evidence="1">
        <location>
            <begin position="51"/>
            <end position="203"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69753.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="213" mass="23131" checksum="FAAD5DC43F6A1FC1" modified="2015-12-09" version="1">MRPIHTEDDLNRGLSELLAANPRLRSISERAGSLPLRRRPADFEGLAHIITGQQVSVASASAIFARLQTLVTPLTAESLACFSDEDLAAVGLSKPKIRTLRAVTTACENGLDLAGLATAPAEDAHNQLCEIKGIGRWTADIFLLFCAGHPDIFPSGDLALQIAVRDAFELSEKPDVKTLDRIASDWAPNRGVAARLLWAWYRVQKQGKETLPV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7R2</accession>
    <name>A0A0M7A7R2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative 2-aminoethylphosphonate-binding periplasmic protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">phnS</name>
        <name evidence="2" type="ORF">LAX5112_02203</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69664.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671842.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02203"/>
    <dbReference type="EnsemblBacteria" id="CTQ69664">
        <property type="protein sequence ID" value="CTQ69664"/>
        <property type="gene ID" value="LAX5112_02203"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809181" evidence="1">
        <location>
            <begin position="21"/>
            <end position="331"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69664.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="331" mass="35741" checksum="70F479481EB79519" modified="2015-12-09" version="1">MKHTLFALAMTMGAVVPAMAEEAICYNCPPQWADWASMLEAIDEKLGIAMPHDNKNSGQTLSQLLAEKAAPVADVAYYGVTTGIKAGNEGVAAAYKPTGFDDIPEGLKDPEGKWFAVHYGTLGLFVNVDALGGAPVPQCFADLKKPEYRGMVGYLDPSSAFVGYAGAVAVNLAFGGDLENFDPAISYFNELAENAPIVPKQTSFARVVSGEIPILFDYDFNAYRGKYEEDGNFEFVLPCEGSVRVPYVMSLVAGAPNEETGKKVLDFILSDEGQAIWTNAYLQPSRPVDLPAEVAAKFLPASDYARAVAVDYAHMERAQSGFGERYLNEVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7W6</accession>
    <name>A0A0M7A7W6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcriptional regulator BolA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02268</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the BolA/IbaG family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69823.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02268"/>
    <dbReference type="EnsemblBacteria" id="CTQ69823">
        <property type="protein sequence ID" value="CTQ69823"/>
        <property type="gene ID" value="LAX5112_02268"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.90">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002634">
        <property type="entry name" value="BolA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036065">
        <property type="entry name" value="BolA-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01722">
        <property type="entry name" value="BolA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF003113">
        <property type="entry name" value="BolA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82657">
        <property type="entry name" value="SSF82657"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU003860"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69823.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="84" mass="9189" checksum="0F51854389885995" modified="2015-12-09" version="1">MKQTITDKLTAAFAPSHLNVIDESENHRGHGGWREGGETHFRVQIAADAFQSMSRVGQHRAINEVLADELASSVHALAIEVKKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7Y8</accession>
    <name>A0A0M7A7Y8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02590</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70727.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70727">
        <property type="protein sequence ID" value="CTQ70727"/>
        <property type="gene ID" value="LAX5112_02590"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ70727.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="228" mass="24898" checksum="24D70B73C1C25730" modified="2015-12-09" version="1">MARNLFPPVFALLLLVGTSLGEPARGRDCLNFLAVNSFTFGSIISSLQESFARSGVCFEIDYAPAPRNSLLLRQGKVDGELFRIPDYKNTIGNTAIMVPEPIIEGYGLLVAVSQDVLDENPADIQGMAVGRGVVWQNHVSLPSSGVSEVGDYEALMTMLRTGRVSAVLIDNVNFALLRTPEESLFAKRVTPKLQAHLFLHASQASLLPEIDTAIRVWKEKHAPTQGDY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8R9</accession>
    <name>A0A0M7A8R9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">MAPEG family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">LAX5112_02860</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71545.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02860"/>
    <dbReference type="EnsemblBacteria" id="CTQ71545">
        <property type="protein sequence ID" value="CTQ71545"/>
        <property type="gene ID" value="LAX5112_02860"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.550">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023352">
        <property type="entry name" value="MAPEG-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001129">
        <property type="entry name" value="Membr-assoc_MAPEG"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01124">
        <property type="entry name" value="MAPEG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161084">
        <property type="entry name" value="SSF161084"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 4" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2 4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="12"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="90"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="118"/>
            <end position="137"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ71545.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="138" mass="15227" checksum="BA9EEF6345ABCBF3" modified="2015-12-09" version="1">MKAHLNLDVMEITVPLAIWCILAAAILPILSAFPAKLSKDFDNANPRDPGYWREGFRARAQAAQANGFEAFPLFAVSVIVGIGQGGSDYWINQLAVLFVMLRVIYVACYWTDRATPRSLAWTAGFLTCVAIFTSPVWS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9I5</accession>
    <name>A0A0M7A9I5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative cobalamin binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02935</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71805.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02935"/>
    <dbReference type="EnsemblBacteria" id="CTQ71805">
        <property type="protein sequence ID" value="CTQ71805"/>
        <property type="gene ID" value="LAX5112_02935"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031419">
        <property type="term" value="F:cobalamin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006158">
        <property type="entry name" value="Cobalamin-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036724">
        <property type="entry name" value="Cobalamin-bd_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52242">
        <property type="entry name" value="SSF52242"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51332">
        <property type="entry name" value="B12_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="B12-binding" evidence="2">
        <location>
            <begin position="185"/>
            <end position="309"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51332"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ71805.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="309" mass="33883" checksum="76CE211A6944D9C9" modified="2015-12-09" version="1">MANNYDGEQPTENNKTPSTLADNGLTITADETANLSVQDLTVLERSVRGQVSGLVGALHPNIKNRTLNGTSVSRLDLRLHPELDERARQMPSMDVAISYRVPFLKALIDPDPRHHRDLIEELVQTNIPLQTLAIHLLCPIATELGNYWCNDDADFMQVAVASTRLSNIVNHLTHAGPRPSVPKTEKRILLARSRGTKHTLGVTLVRMCFQDLGWIVDGGADMEIGDTMYMRLSARSYDLLGLSVGRLEEAIDCKEAIERSRSEIVTENTKIVIGGAAVLTHPEGFQNTGADFVTRSALEAITLAEQAVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9L3</accession>
    <name>A0A0M7A9L3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Small-conductance mechanosensitive channel</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">mscS</name>
        <name evidence="9" type="ORF">LAX5112_02503</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Mechanosensitive channel that participates in the regulation of osmotic pressure changes within the cell, opening in response to stretch forces in the membrane lipid bilayer, without the need for other proteins. Contributes to normal resistance to hypoosmotic shock. Forms an ion channel of 1.0 nanosiemens conductance with a slight preference for anions.</text>
    </comment>
    <comment type="subunit">
        <text evidence="8">Homoheptamer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cell inner membrane</location>
            <topology evidence="8">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the MscS (TC 1.A.23) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70423.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008192317.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02503"/>
    <dbReference type="EnsemblBacteria" id="CTQ70423">
        <property type="protein sequence ID" value="CTQ70423"/>
        <property type="gene ID" value="LAX5112_02503"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008381">
        <property type="term" value="F:mechanosensitive ion channel activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010920">
        <property type="entry name" value="LSM_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045275">
        <property type="entry name" value="MscS_archaea/bacteria_type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006685">
        <property type="entry name" value="MscS_channel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011066">
        <property type="entry name" value="MscS_channel_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011014">
        <property type="entry name" value="MscS_channel_TM-2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023408">
        <property type="entry name" value="MscS_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30221">
        <property type="entry name" value="PTHR30221"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00924">
        <property type="entry name" value="MS_channel"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50182">
        <property type="entry name" value="SSF50182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82689">
        <property type="entry name" value="SSF82689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82861">
        <property type="entry name" value="SSF82861"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8" id="KW-0407">Ion channel</keyword>
    <keyword evidence="8" id="KW-0406">Ion transport</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0346">Stress response</keyword>
    <keyword evidence="4 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="8" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="20"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="60"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="85"/>
            <end position="115"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008017"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU369025"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ70423.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="268" mass="28964" checksum="F541F50005266482" modified="2015-12-09" version="1">MNGTMDQVTVYMPLVINAAKALIVLIIGWLIAGALSSFVRKRIVSHERIDDTIGGFAASIVRWLVLLVTFIAVLQLFGIQATSLVAVLGAGTLAIGLALQGTLSDIAAGVMLIIFRPYKIGQFVSIGGTSGTVKDLNIFVTELVTPDNVQIIMPNGQAWGTVITNFSAHKTRRLDLTFGIDYGDDADKAIQIILDTATADARVHKDPEPWVRVTNLGDSSVDLGVRLWCDAGDYWELKFHMLKSVKEAFDAGGISIPYPHQVEIQKAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AA96</accession>
    <name>A0A0M7AA96_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Multidrug resistance protein MdtN</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02546</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70544.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02546"/>
    <dbReference type="EnsemblBacteria" id="CTQ70544">
        <property type="protein sequence ID" value="CTQ70544"/>
        <property type="gene ID" value="LAX5112_02546"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="423"/>
            <end position="442"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="117"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="204"/>
            <end position="231"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ70544.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="442" mass="47810" checksum="1410F7047F8537DB" modified="2015-12-09" version="1">MERTKLVLKALLQTALAFAILFGAFKGMNQLIATRPDVPKRPVQENSYAVETTTVQQGDYAPLISVYGQTQAGREVDLRALVGGEIVEVHQDLKAGGKVERGDTLVVIDSFDYEGAVTEARANLAEAQAALVENEGRVALEKANLLRAGEQLEFAQRDLERAEELLGRGAITERTVDDRKLIVSQRQQSVERSENTLALEEAKVIQQNATVDRLEWRLENAQRQLENTVLTAPFDAIVRSSAAEPGRLISVNDAIVSLYDSSEFEVRLTLSDNQYGRLLADSGTVVGRPVDVIWNLGDQPVTYPATVTRIGADVVSDRGGVDLIARIDASGAAVPLRPGAFVEVAVPDRTYANSFRIPETAYYGQGTVYVVEDNRLQARSVNALAIDDGFILVRGDLNSGETLLVTRIPEAGEGLLVSDVNAEQPAANEAAEPADQSAAVAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABN8</accession>
    <name>A0A0M7ABN8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">TRAP transporter solute receptor, TAXI family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02701</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71054.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672258.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02701"/>
    <dbReference type="EnsemblBacteria" id="CTQ71054">
        <property type="protein sequence ID" value="CTQ71054"/>
        <property type="gene ID" value="LAX5112_02701"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011852">
        <property type="entry name" value="TRAP_TAXI"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42941">
        <property type="entry name" value="PTHR42941"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16868">
        <property type="entry name" value="NMT1_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02122">
        <property type="entry name" value="TRAP_TAXI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0675">Receptor</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809568" evidence="1">
        <location>
            <begin position="23"/>
            <end position="331"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71054.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="331" mass="35027" checksum="3E41C32669DBC842" modified="2015-12-09" version="1">MKFNLITGAVVIAAMTALPAAADNHSVDKTGWPESFTVGTGSQGGTYFGYGTGWANIAGEELGVSGGAEVTGGPMQNMALVHSGDLPFGMTTMGPAAESIAGSNPIAPGLKMDKACAMFPMYQTPFSITALSSSGITSVADIPEGARIGFGPAGSTSDTYFPRMMEELGVKFERRNGGWSDLGSQLQDGLLDVIAFAAGVPVPAVSQLEVQTDINIIEFSEDEQTKITAAFPVANFDIAADTYTTLESPARSVSMWNFAIANCDLPETFVHGVVKAVMSDNGRMVQTHKAARSTLPEFWDRNTVMKWHPGAARWFQENASADIPADMIYSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABR8</accession>
    <name>A0A0M7ABR8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Bacilysin biosynthesis oxidoreductase YwfH</fullName>
            <ecNumber evidence="1">1.-.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">ywfH_2</name>
        <name evidence="1" type="ORF">LAX5112_02711</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.-.-.-" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71084.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672266.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02711"/>
    <dbReference type="EnsemblBacteria" id="CTQ71084">
        <property type="protein sequence ID" value="CTQ71084"/>
        <property type="gene ID" value="LAX5112_02711"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ71084.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="259" mass="27171" checksum="89A0B7120F4F0796" modified="2015-12-09" version="1">MDLGLRGKSAIVCASSRGLGRGCAEALAEAGCDLVINGRDKDALEATRTYLTDTFQVKVSVVAGDVSTPEGQAALLTACPEPDILVNNNGGPPRKDYTELNRSALLEGAIQNFVTPIELIQAVTPGMKNRGFGRIVNITSLSVKMPIEGLDLSSGARAGLTAFLAGVCRQLAPHGVTVNNLLPGKMDTDRLKGGFERSAQQSGQTVDAIRASQAAEIPARRFGTAEEFGQTCAFLCSRHAGYVTGQNILMDGGLYPAAF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADE0</accession>
    <name>A0A0M7ADE0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03356</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72899.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72899">
        <property type="protein sequence ID" value="CTQ72899"/>
        <property type="gene ID" value="LAX5112_03356"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="38"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="72"/>
            <end position="94"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72899.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="122" mass="14003" checksum="6940008C20B77614" modified="2015-12-09" version="1">MKNRNPLDVLSEEEIDYYRENPDEIHELLNRETVRKKMIGFIVLVAVTLVTVSKAIPYLFEDIPGGSFVSEVVVDLIFEMGAALMGAVATLLFIEVTQARQYEENKQLYRALKAKLKIEKKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADM7</accession>
    <name>A0A0M7ADM7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Methylmalonyl-CoA epimerase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03473</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the methylmalonyl-CoA epimerase family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73245.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451935.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03473"/>
    <dbReference type="EnsemblBacteria" id="CTQ73245">
        <property type="protein sequence ID" value="CTQ73245"/>
        <property type="gene ID" value="LAX5112_03473"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd07249">
        <property type="entry name" value="MMCE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.180.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029068">
        <property type="entry name" value="Glyas_Bleomycin-R_OHBP_Dase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017515">
        <property type="entry name" value="MeMalonyl-CoA_epimerase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037523">
        <property type="entry name" value="VOC"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54593">
        <property type="entry name" value="SSF54593"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03081">
        <property type="entry name" value="metmalonyl_epim"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51819">
        <property type="entry name" value="VOC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="VOC" evidence="2">
        <location>
            <begin position="4"/>
            <end position="134"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009308"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51819"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ73245.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="134" mass="14245" checksum="7C29564028E1A7CA" modified="2015-12-09" version="1">MIGRLNHVAIAVSDIEAATAVYRDTLGADVSAKEAQPDHGVSTVFINLPNTKIELLEPLGDDSPIAKFLEKNPSGGIHHVCYEVDDIIAARDKLVADGARVLGSGEPKIGAHGKPVLFLHPKDFLGTLTELEEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADM9</accession>
    <name>A0A0M7ADM9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Magnesium chelatase</fullName>
            <ecNumber evidence="3">6.6.1.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">cobN_2</name>
        <name evidence="11" type="ORF">LAX5112_02947</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + H2O + Mg(2+) + protoporphyrin IX = ADP + 3 H(+) + Mg-protoporphyrin IX + phosphate</text>
            <dbReference type="Rhea" id="RHEA:13961"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57306"/>
            <dbReference type="ChEBI" id="CHEBI:60492"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.6.1.1"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="9">Porphyrin-containing compound metabolism.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the Mg-chelatase subunit H family.</text>
    </comment>
    <dbReference type="EC" id="6.6.1.1" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71843.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672462.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02947"/>
    <dbReference type="EnsemblBacteria" id="CTQ71843">
        <property type="protein sequence ID" value="CTQ71843"/>
        <property type="gene ID" value="LAX5112_02947"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00040"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016851">
        <property type="term" value="F:magnesium chelatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015995">
        <property type="term" value="P:chlorophyll biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015979">
        <property type="term" value="P:photosynthesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd10150">
        <property type="entry name" value="CobN_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011771">
        <property type="entry name" value="BchH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003672">
        <property type="entry name" value="CobN/Mg_chltase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022571">
        <property type="entry name" value="Mg_chelatase_H_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR44119">
        <property type="entry name" value="PTHR44119"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02514">
        <property type="entry name" value="CobN-Mg_chel"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11965">
        <property type="entry name" value="DUF3479"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02025">
        <property type="entry name" value="BchH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8" id="KW-0149">Chlorophyll biosynthesis</keyword>
    <keyword evidence="5 11" id="KW-0436">Ligase</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-0602">Photosynthesis</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF3479" evidence="10">
        <location>
            <begin position="14"/>
            <end position="178"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001499"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010851"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022531"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023444"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF11965"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ71843.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="1256" mass="137117" checksum="0643DF559EEDF0B3" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEJ8</accession>
    <name>A0A0M7AEJ8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Carboxylate/amino acid/amine transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03078</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72163.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03078"/>
    <dbReference type="EnsemblBacteria" id="CTQ72163">
        <property type="protein sequence ID" value="CTQ72163"/>
        <property type="gene ID" value="LAX5112_03078"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000620">
        <property type="entry name" value="EamA_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00892">
        <property type="entry name" value="EamA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="26"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="52"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="77"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="106"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="133"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="162"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="189"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="domain" description="EamA" evidence="2">
        <location>
            <begin position="75"/>
            <end position="207"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ72163.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="215" mass="23030" checksum="E39FAEDD391B51EE" modified="2015-12-09" version="1">MRAFCLLGTTIFNFLAVRYLQLAETMSIMFAAPFVITALAGPFLGEWAGIRRWAAIVVGFIGVLVVTRPGLGGLHWAVVYSLAAMTFYAVYALLTRKLAATESSAGMLIISGVVAAVAMAPVGISVWQEPNGLWEWTLLIATGALGGGGHFLFILAHRMAPAPVLAPLIYIQIVWMIVLGYLIFDDVPIVTTLLGASIVVASGLYILYREQVKAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGA3</accession>
    <name>A0A0M7AGA3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase</fullName>
            <ecNumber evidence="9">4.2.1.59</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="9">Beta-hydroxydecanoyl thioester dehydrase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="9">Trans-2-decenoyl-[acyl-carrier-protein] isomerase</fullName>
            <ecNumber evidence="9">5.3.3.14</ecNumber>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9 10" type="primary">fabA</name>
        <name evidence="10" type="ORF">LAX5112_03789</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to E-(2)-decenoyl-ACP and then its isomerization to Z-(3)-decenoyl-ACP. Can catalyze the dehydratase reaction for beta-hydroxyacyl-ACPs with saturated chain lengths up to 16:0, being most active on intermediate chain length.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>(2E)-decenoyl-[ACP] = (3Z)-decenoyl-[ACP]</text>
            <dbReference type="Rhea" id="RHEA:23568"/>
            <dbReference type="Rhea" id="RHEA-COMP:9639"/>
            <dbReference type="Rhea" id="RHEA-COMP:9927"/>
            <dbReference type="ChEBI" id="CHEBI:78467"/>
            <dbReference type="ChEBI" id="CHEBI:78798"/>
            <dbReference type="EC" id="5.3.3.14"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>(3R)-hydroxydecanoyl-[ACP] = (2E)-decenoyl-[ACP] + H2O</text>
            <dbReference type="Rhea" id="RHEA:41860"/>
            <dbReference type="Rhea" id="RHEA-COMP:9638"/>
            <dbReference type="Rhea" id="RHEA-COMP:9639"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:78466"/>
            <dbReference type="ChEBI" id="CHEBI:78467"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 9">
            <text>a (3R)-hydroxyacyl-[ACP] = a (2E)-enoyl-[ACP] + H2O</text>
            <dbReference type="Rhea" id="RHEA:13097"/>
            <dbReference type="Rhea" id="RHEA-COMP:9925"/>
            <dbReference type="Rhea" id="RHEA-COMP:9945"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:78784"/>
            <dbReference type="ChEBI" id="CHEBI:78827"/>
            <dbReference type="EC" id="4.2.1.59"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3 9">Lipid metabolism; fatty acid biosynthesis.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5 9">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 9">Belongs to the thioester dehydratase family. FabA subfamily.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.59" evidence="9"/>
    <dbReference type="EC" id="5.3.3.14" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74185.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008194104.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03789"/>
    <dbReference type="EnsemblBacteria" id="CTQ74185">
        <property type="protein sequence ID" value="CTQ74185"/>
        <property type="gene ID" value="LAX5112_03789"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00094"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008659">
        <property type="term" value="F:(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008693">
        <property type="term" value="F:3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047451">
        <property type="term" value="F:3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004317">
        <property type="term" value="F:3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034017">
        <property type="term" value="F:trans-2-decenoyl-acyl-carrier-protein isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006633">
        <property type="term" value="P:fatty acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01287">
        <property type="entry name" value="FabA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00405">
        <property type="entry name" value="FabA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010083">
        <property type="entry name" value="FabA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013114">
        <property type="entry name" value="FabA_FabZ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029069">
        <property type="entry name" value="HotDog_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30272">
        <property type="entry name" value="PTHR30272"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30272:SF8">
        <property type="entry name" value="PTHR30272:SF8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07977">
        <property type="entry name" value="FabA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54637">
        <property type="entry name" value="SSF54637"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01749">
        <property type="entry name" value="fabA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7 9" id="KW-0275">Fatty acid biosynthesis</keyword>
    <keyword evidence="6 9" id="KW-0276">Fatty acid metabolism</keyword>
    <keyword evidence="8 9" id="KW-0413">Isomerase</keyword>
    <keyword evidence="9" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="9" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="9 10" id="KW-0456">Lyase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" evidence="9">
        <location>
            <position position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001055"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00006714"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022832"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023160"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00405"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ74185.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="168" mass="18654" checksum="1908EB04961CDAF3" modified="2015-12-09" version="1">MTERRSSYDYEALLACGRGELFGPGNAQLPLPPMLMFDRITEISETGGEFDKGYIRAEFDIKPDLWFFPCHFQGNPIMPGCLGLDALWQLTGFHLGWQGLPGKGMALSTGEIKFKGMVTPETKLVEYGVDFKRVMKGRLVLGIADGWLKADGEQIYKAKDLRVGLSTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGC7</accession>
    <name>A0A0M7AGC7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03482</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73270.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451929.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03482"/>
    <dbReference type="EnsemblBacteria" id="CTQ73270">
        <property type="protein sequence ID" value="CTQ73270"/>
        <property type="gene ID" value="LAX5112_03482"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="53"/>
            <end position="73"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73270.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="78" mass="8066" checksum="487425C18EA008B6" modified="2015-12-09" version="1">MEVSLPGVIGAAVGLYVGWLDWKILKGILQAAETKNKQAGGDGGVVARYRAPIGVLIFGIPVIGFPIIGYWAASLLAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGH4</accession>
    <name>A0A0M7AGH4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">RNA polymerase sigma-54 factor</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">rpoN2</name>
        <name evidence="13" type="ORF">LAX5112_03642</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 9">Belongs to the sigma-54 factor family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73737.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672985.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03642"/>
    <dbReference type="EnsemblBacteria" id="CTQ73737">
        <property type="protein sequence ID" value="CTQ73737"/>
        <property type="gene ID" value="LAX5112_03642"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000428">
        <property type="term" value="C:DNA-directed RNA polymerase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0001216">
        <property type="term" value="F:DNA-binding transcription activator activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016779">
        <property type="term" value="F:nucleotidyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016987">
        <property type="term" value="F:sigma factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006352">
        <property type="term" value="P:DNA-templated transcription, initiation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.1330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000394">
        <property type="entry name" value="RNA_pol_sigma_54"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007046">
        <property type="entry name" value="RNA_pol_sigma_54_core-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007634">
        <property type="entry name" value="RNA_pol_sigma_54_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038709">
        <property type="entry name" value="RpoN_core-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32248">
        <property type="entry name" value="PTHR32248"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00309">
        <property type="entry name" value="Sigma54_AID"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04963">
        <property type="entry name" value="Sigma54_CBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04552">
        <property type="entry name" value="Sigma54_DBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000774">
        <property type="entry name" value="RpoN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00045">
        <property type="entry name" value="SIGMA54FCT"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02395">
        <property type="entry name" value="rpoN_sigma"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00717">
        <property type="entry name" value="SIGMA54_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00718">
        <property type="entry name" value="SIGMA54_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 9" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2 9" id="KW-0240">DNA-directed RNA polymerase</keyword>
    <keyword evidence="4 9" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 9" id="KW-0731">Sigma factor</keyword>
    <keyword evidence="8 9" id="KW-0804">Transcription</keyword>
    <keyword evidence="5 9" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="3 9" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Sigma54_CBD" evidence="12">
        <location>
            <begin position="153"/>
            <end position="340"/>
        </location>
    </feature>
    <feature type="domain" description="Sigma54_DBD" evidence="11">
        <location>
            <begin position="355"/>
            <end position="514"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="50"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="114"/>
            <end position="145"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008798"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023082"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRNR" id="PIRNR000774"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF04552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF04963"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="CTQ73737.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="520" mass="57116" checksum="6535A4F36A46B25B" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGV9</accession>
    <name>A0A0M7AGV9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03849</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74395.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673164.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03849"/>
    <dbReference type="EnsemblBacteria" id="CTQ74395">
        <property type="protein sequence ID" value="CTQ74395"/>
        <property type="gene ID" value="LAX5112_03849"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021836">
        <property type="entry name" value="DUF3429"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15887">
        <property type="entry name" value="PTHR15887"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11911">
        <property type="entry name" value="DUF3429"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="57"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="98"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="142"/>
            <end position="160"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74395.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="161" mass="17583" checksum="0E993A646539908B" modified="2015-12-09" version="1">MPNSAEATARMLVSHDDVPLTVFLLTAAGFLPFGALSFGAVFLPAEAQAWILPAQHVYAAIILSFLGGIYWGWEFAMTFVQSRPVSPMRLVIGVLPSIFGWLALFLNGIWPALALTACFLAWLGYDLWRTQSHSAPRWYPKLRIPVTVAVVVSLIAPVLAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGW9</accession>
    <name>A0A0M7AGW9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Outer membrane protein assembly factor BamB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">bamB</name>
        <name evidence="2" type="ORF">LAX5112_03853</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74405.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03853"/>
    <dbReference type="EnsemblBacteria" id="CTQ74405">
        <property type="protein sequence ID" value="CTQ74405"/>
        <property type="gene ID" value="LAX5112_03853"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018391">
        <property type="entry name" value="PQQ_beta_propeller_repeat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002372">
        <property type="entry name" value="PQQ_repeat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011047">
        <property type="entry name" value="Quinoprotein_ADH-like_supfam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13360">
        <property type="entry name" value="PQQ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00564">
        <property type="entry name" value="PQQ"/>
        <property type="match status" value="7"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50998">
        <property type="entry name" value="SSF50998"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74405.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="450" mass="46175" checksum="B731101F503A1C2A" modified="2015-12-09" version="1">MIGFLKNVSVRPLVVTLALPVFLAGCGSVSEFGSSLNPFSKEDILPGERQAVFDGIDPAAQALGKAASIGAATGGQTWTSAGGGPANDPGNVAVSVSGSRAWQANVGSSGRGLTSSALRVSSRPVSDGSRIYVYKPNGEVVALSTAGGRQWTQNLRPEEERDVGPGGGVVVDGGVVYAATGYRQVAALEAGSGRVIWTAEMDTPARGAPAAGGGHVFVVSQSNEVYAFSKEDGTVAWTFAGIEETAGVLSAANPAISGNRVIVPFSSGEIMAINIKSGEPDWIDGVSRGFRTLALSGLADVSASPVVSGNTVVATGVAGRTVAVDVRTGQRQWDQNLGSVHTPVVSGNAVFMVDLDDRMVALDRSSGETMWATQLPKPEKKKRRRNWAGPILANGALVAFSSDGQIAMVDSASGNIMTTQRTNTDVFVTPIAAGGRVVVLTGRDGVAAFN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AH88</accession>
    <name>A0A0M7AH88_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Dihydrofolate synthase/folylpolyglutamate synthase</fullName>
            <ecNumber evidence="6">6.3.2.12</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="17">Folylpoly-gamma-glutamate synthetase-dihydrofolate synthetase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="16">Folylpolyglutamate synthetase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="20" type="primary">fgs</name>
        <name evidence="20" type="ORF">LAX5112_03818</name>
    </gene>
    <organism evidence="20 21">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="21" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="21">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Functions in two distinct reactions of the de novo folate biosynthetic pathway. Catalyzes the addition of a glutamate residue to dihydropteroate (7,8-dihydropteroate or H2Pte) to form dihydrofolate (7,8-dihydrofolate monoglutamate or H2Pte-Glu). Also catalyzes successive additions of L-glutamate to tetrahydrofolate or 10-formyltetrahydrofolate or 5,10-methylenetetrahydrofolate, leading to folylpolyglutamate derivatives.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>(6R)-5,10-methylenetetrahydrofolyl-(gamma-L-Glu)(n) + ATP + L-glutamate = (6R)-5,10-methylenetetrahydrofolyl-(gamma-L-Glu)(n+1) + ADP + H(+) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:51912"/>
            <dbReference type="Rhea" id="RHEA-COMP:13257"/>
            <dbReference type="Rhea" id="RHEA-COMP:13258"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:136572"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.2.17"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>10-formyltetrahydrofolyl-(gamma-L-Glu)(n) + ATP + L-glutamate = 10-formyltetrahydrofolyl-(gamma-L-Glu)(n+1) + ADP + H(+) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:51904"/>
            <dbReference type="Rhea" id="RHEA-COMP:13088"/>
            <dbReference type="Rhea" id="RHEA-COMP:14300"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:134413"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.2.17"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>7,8-dihydropteroate + ATP + L-glutamate = 7,8-dihydrofolate + ADP + H(+) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:23584"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17839"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57451"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.2.12"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="5">Cofactor biosynthesis; tetrahydrofolate biosynthesis; 7,8-dihydrofolate from 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine diphosphate and 4-aminobenzoate: step 2/2.</text>
    </comment>
    <comment type="similarity">
        <text evidence="18">Belongs to the folylpolyglutamate synthase family.</text>
    </comment>
    <dbReference type="EC" id="6.3.2.12" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74269.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673124.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03818"/>
    <dbReference type="EnsemblBacteria" id="CTQ74269">
        <property type="protein sequence ID" value="CTQ74269"/>
        <property type="gene ID" value="LAX5112_03818"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00077">
        <property type="reaction ID" value="UER00157"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008841">
        <property type="term" value="F:dihydrofolate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004326">
        <property type="term" value="F:tetrahydrofolylpolyglutamate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007049">
        <property type="term" value="P:cell cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046656">
        <property type="term" value="P:folic acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008360">
        <property type="term" value="P:regulation of cell shape"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046654">
        <property type="term" value="P:tetrahydrofolate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1190.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.190.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001645">
        <property type="entry name" value="Folylpolyglutamate_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018109">
        <property type="entry name" value="Folylpolyglutamate_synth_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036565">
        <property type="entry name" value="Mur-like_cat_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036615">
        <property type="entry name" value="Mur_ligase_C_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013221">
        <property type="entry name" value="Mur_ligase_cen"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11136">
        <property type="entry name" value="PTHR11136"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08245">
        <property type="entry name" value="Mur_ligase_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001563">
        <property type="entry name" value="Folylpolyglu_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53244">
        <property type="entry name" value="SSF53244"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53623">
        <property type="entry name" value="SSF53623"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01499">
        <property type="entry name" value="folC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01012">
        <property type="entry name" value="FOLYLPOLYGLU_SYNT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="18" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="14" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="8" id="KW-0132">Cell division</keyword>
    <keyword evidence="12" id="KW-0133">Cell shape</keyword>
    <keyword evidence="15" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="11" id="KW-0289">Folate biosynthesis</keyword>
    <keyword evidence="18 20" id="KW-0436">Ligase</keyword>
    <keyword evidence="10" id="KW-0460">Magnesium</keyword>
    <keyword evidence="9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="18" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="13" id="KW-0573">Peptidoglycan synthesis</keyword>
    <keyword evidence="21" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Mur_ligase_M" evidence="19">
        <location>
            <begin position="46"/>
            <end position="264"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000058"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00000104"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00000809"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00002714"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00004799"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00013023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00019357"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022909"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00022984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00030048"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00032510"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="PIRNR" id="PIRNR001563"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="19">
        <source>
            <dbReference type="Pfam" id="PF08245"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="EMBL" id="CTQ74269.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="21">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="438" mass="46656" checksum="7232C5CD3A89B752" modified="2015-12-09" version="1">MDQITRILDRLLALHPKEIDLSLGRMHRLLAALGSPEKRLPPVIHIAGTNGKGSVTATLRAILEASGKRCHVYTSPHLVSFNERIRLGSDGKFVSDPELFDALQRCEEANGGEEITFFEITTAAAFLLFAEHPADVVLLEVGLGGRLDATNVIDDPLVSVITPVSMDHEKFLGDDLSVIAAEKAGIIKPERPVVSAEQDPAAHIVIERQAARCRAALKVCGQDFIAHPDQGRMAYQDDDGLLDLVQPVLGGGHQYANSALALAALKAANLLPDIASIDAGLKSVNWPGRLQPLTHGPLVDMCPDGSEIWLDGGHNPGAGFTVAQFMGEQEERGPRPLYLVAGMLTTKDPVGFFRPFDGLVRHVGTVPIATTNTARTPEDLADLARCAGLEATPFPSLDAALADVAACAAKDGEPPRILICGSLYLAGEALARNKMAPD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AH91</accession>
    <name>A0A0M7AH91_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Cyanophycin synthetase</fullName>
            <ecNumber evidence="4">6.3.2.29</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">cphA_2</name>
        <name evidence="4" type="ORF">LAX5112_03705</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the D-alanine--D-alanine ligase family.</text>
    </comment>
    <dbReference type="EC" id="6.3.2.29" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ73951.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673044.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03705"/>
    <dbReference type="EnsemblBacteria" id="CTQ73951">
        <property type="protein sequence ID" value="CTQ73951"/>
        <property type="gene ID" value="LAX5112_03705"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071160">
        <property type="term" value="F:cyanophycin synthetase activity (L-aspartate-adding)"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008716">
        <property type="term" value="F:D-alanine-D-alanine ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1490.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011761">
        <property type="entry name" value="ATP-grasp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013651">
        <property type="entry name" value="ATP-grasp_RimK-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013815">
        <property type="entry name" value="ATP_grasp_subdomain_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011095">
        <property type="entry name" value="Dala_Dala_lig_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07478">
        <property type="entry name" value="Dala_Dala_lig_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08443">
        <property type="entry name" value="RimK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50975">
        <property type="entry name" value="ATP_GRASP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0436">Ligase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ATP-grasp" evidence="3">
        <location>
            <begin position="89"/>
            <end position="330"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010871"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00409"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ73951.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="335" mass="36284" checksum="CA7102A5FE644875" modified="2015-12-09" version="1">MEQSPSLPLVRRILADYCNRQDLSLVCDEGSGQAGYIELADGRRRFFRGTHFDLNPLGAAEIADDKAYTLSFLGRDGFTVPDSLLVHGFDVLASLRVHKPEIAAKMHAAEDALHFAETVGYPVFVKPNSGQEGEDVVRLNDQADLQRALDELLMRHSSLLVQKAVRGADLRILVLDGEILLALDRQPVQVEGDGEQTVEQLAIGVAGLNFRDPRIEHELTRQGLGPASILEEGQTVELLPNNNLSAGAKAKDITNSLAGDLKQTAVSICGSLGLRYAGIDLIAENPEKPGSRYAVLEVNAAPGLNRYAAQGAEELAKVTSVYERVLDALTNWGPQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHI7</accession>
    <name>A0A0M7AHI7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Divergent polysaccharide deacetylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03622</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73680.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03622"/>
    <dbReference type="EnsemblBacteria" id="CTQ73680">
        <property type="protein sequence ID" value="CTQ73680"/>
        <property type="gene ID" value="LAX5112_03622"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd10936">
        <property type="entry name" value="CE4_DAC2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006837">
        <property type="entry name" value="Divergent_DAC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011330">
        <property type="entry name" value="Glyco_hydro/deAcase_b/a-brl"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30105">
        <property type="entry name" value="PTHR30105"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04748">
        <property type="entry name" value="Polysacc_deac_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88713">
        <property type="entry name" value="SSF88713"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="43"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73680.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="383" mass="41571" checksum="05A7133646278417" modified="2015-12-09" version="1">MSSEDLTAPLGMGKRRLVRLPFGLIGAGLISVVLTTALIWILVVDDPYGGEPFAVLPLDEVVEGITSQDIEVVEIRPTVGDDLGPNLRQQSSGDYLGPRYEMIIRPDGLGPEAPVTGLAINPDPRVSERSDYGFLPMVSDAGVRPLDAYARPIQTQFTSIPKIAVVVTGLGLSEAGTQNAIDSLPADVTFALAPYGSDLDLWMQQARMKGHELLLQLPLEPFDFPDNDPGPHTLLVSLQPTELLDRLAFLLTRATNYVGVIGEMGARFSSTRPSMQYLLEKLETRGLMFVDNGTTSRSIADEVAGELRMPFSGVDVVLDEVPRESNIDAKLLQLESVARARGYAVAAGSALPVTVRQLQEWVQDLEQRGLQLVPVTATIDRDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHP6</accession>
    <name>A0A0M7AHP6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Ribosome hibernation promoting factor</fullName>
            <shortName evidence="2">HPF</shortName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">hpf</name>
        <name evidence="5" type="ORF">LAX5112_03643</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Interacts with 100S ribosomes.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the HPF/YfiA ribosome-associated protein family. Long HPF subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73740.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672986.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03643"/>
    <dbReference type="EnsemblBacteria" id="CTQ73740">
        <property type="protein sequence ID" value="CTQ73740"/>
        <property type="gene ID" value="LAX5112_03643"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044238">
        <property type="term" value="P:primary metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006417">
        <property type="term" value="P:regulation of translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00552">
        <property type="entry name" value="RaiA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.505.50">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00839">
        <property type="entry name" value="HPF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034694">
        <property type="entry name" value="HPF_long/plastid"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036567">
        <property type="entry name" value="RHF-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003489">
        <property type="entry name" value="RHF/RaiA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032528">
        <property type="entry name" value="Ribosom_S30AE_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038416">
        <property type="entry name" value="Ribosom_S30AE_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16321">
        <property type="entry name" value="Ribosom_S30AE_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02482">
        <property type="entry name" value="Ribosomal_S30AE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69754">
        <property type="entry name" value="SSF69754"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00741">
        <property type="entry name" value="yfiA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0810">Translation regulation</keyword>
    <feature type="domain" description="Ribosom_S30AE_C" evidence="4">
        <location>
            <begin position="130"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="3">
        <location>
            <begin position="73"/>
            <end position="100"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022845"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00839"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF16321"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ73740.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="195" mass="21303" checksum="C68DFD15F85AA3F4" modified="2015-12-09" version="1">MALRISGKNVDVGDAMRVHITDRIEDALSKYFTGGFTGHVTLSREGTGFKSECTVHLDTGIVLQVSAQDQDPRNSFDQAADKIEKRLRRYKRKLKDHHSHNGNGREAFEAASYVLASPEEDEEVPVDFNPLVIAETSAKVKTMTVGMAVMELDLTEAPVVMFKNAANGGVNVVYRRADGNIGWIDPALVANAAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AI37</accession>
    <name>A0A0M7AI37_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Putative cyclic di-GMP phosphodiesterase YliE</fullName>
            <ecNumber evidence="5">3.1.4.52</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">yliE_2</name>
        <name evidence="5" type="ORF">LAX5112_03980</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.4.52" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74805.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03980"/>
    <dbReference type="EnsemblBacteria" id="CTQ74805">
        <property type="protein sequence ID" value="CTQ74805"/>
        <property type="gene ID" value="LAX5112_03980"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071111">
        <property type="term" value="F:cyclic-guanylate-specific phosphodiesterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd01948">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.580.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.450">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000644">
        <property type="entry name" value="CBS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046342">
        <property type="entry name" value="CBS_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001633">
        <property type="entry name" value="EAL_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035919">
        <property type="entry name" value="EAL_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000160">
        <property type="entry name" value="GGDEF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00571">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00563">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00990">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00052">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00267">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141868">
        <property type="entry name" value="SSF141868"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54631">
        <property type="entry name" value="SSF54631"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00254">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51371">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50883">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50887">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0129">CBS domain</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="EAL" evidence="2">
        <location>
            <begin position="10"/>
            <end position="264"/>
        </location>
    </feature>
    <feature type="domain" description="CBS" evidence="4">
        <location>
            <begin position="285"/>
            <end position="344"/>
        </location>
    </feature>
    <feature type="domain" description="GGDEF" evidence="3">
        <location>
            <begin position="444"/>
            <end position="585"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00703"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51371"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ74805.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="607" mass="67571" checksum="60184F2FC075E094" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIG4</accession>
    <name>A0A0M7AIG4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Phosphoribosyl-ATP pyrophosphatase</fullName>
            <shortName evidence="9">PRA-PH</shortName>
            <ecNumber evidence="9">3.6.1.31</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9 10" type="primary">hisE</name>
        <name evidence="10" type="ORF">LAX5112_03805</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 9">
            <text>1-(5-phospho-beta-D-ribosyl)-ATP + H2O = 1-(5-phospho-beta-D-ribosyl)-5'-AMP + diphosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:22828"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:59457"/>
            <dbReference type="ChEBI" id="CHEBI:73183"/>
            <dbReference type="EC" id="3.6.1.31"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 9">Amino-acid biosynthesis; L-histidine biosynthesis; L-histidine from 5-phospho-alpha-D-ribose 1-diphosphate: step 2/9.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 9">Belongs to the PRA-PH family.</text>
    </comment>
    <dbReference type="EC" id="3.6.1.31" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74232.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673115.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03805"/>
    <dbReference type="EnsemblBacteria" id="CTQ74232">
        <property type="protein sequence ID" value="CTQ74232"/>
        <property type="gene ID" value="LAX5112_03805"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00031">
        <property type="reaction ID" value="UER00007"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004636">
        <property type="term" value="F:phosphoribosyl-ATP diphosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000105">
        <property type="term" value="P:histidine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd11534">
        <property type="entry name" value="NTP-PPase_HisIE_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01020">
        <property type="entry name" value="HisE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008179">
        <property type="entry name" value="HisE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021130">
        <property type="entry name" value="PRib-ATP_PPHydrolase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01503">
        <property type="entry name" value="PRA-PH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03188">
        <property type="entry name" value="histidine_hisI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 9" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="7 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="8 9" id="KW-0368">Histidine biosynthesis</keyword>
    <keyword evidence="6 9 10" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001460"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009392"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01020"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ74232.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="107" mass="11662" checksum="986B1DED7006625B" modified="2015-12-09" version="1">MTKFTLEDLDAIIAARAQSSDEMSYTRKLIDKGVAKCAQKLGEEAVEAAIAAVQEDRKELTSEAADLLYHLLVVLNVLNVPLDDVMAELAGRTGQTGLEEKASRQQE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJK8</accession>
    <name>A0A0M7AJK8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04194</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75345.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008192007.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04194"/>
    <dbReference type="EnsemblBacteria" id="CTQ75345">
        <property type="protein sequence ID" value="CTQ75345"/>
        <property type="gene ID" value="LAX5112_04194"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="165"/>
            <end position="190"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75345.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="193" mass="21902" checksum="9F9B2B3CD7F3DF04" modified="2015-12-09" version="1">MAEMQDNVVPHTRMRSLRDAIRKVQLGEVERSDVVVELQDTERARLDMLADELKDVFREIPEDDDQFSLQIISGSTPRLWIDATSHVAVAGDRRTYRFLKDTRLGRVVILETANIDDMADCLTEYIAERVLEREKALEGDWLNNRLRQVAMESKVVRVKESHTPWLPVAGAFGIGLALGIVGLIGFAWFANPL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJQ9</accession>
    <name>A0A0M7AJQ9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 9">Guanylate kinase</fullName>
            <ecNumber evidence="2 9">2.7.4.8</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8 9">GMP kinase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9 11" type="primary">gmk</name>
        <name evidence="11" type="ORF">LAX5112_03873</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Essential for recycling GMP and indirectly, cGMP.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>ATP + GMP = ADP + GDP</text>
            <dbReference type="Rhea" id="RHEA:20780"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:58115"/>
            <dbReference type="ChEBI" id="CHEBI:58189"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.4.8"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 9">Belongs to the guanylate kinase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.4.8" evidence="2 9"/>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74470.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673180.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03873"/>
    <dbReference type="EnsemblBacteria" id="CTQ74470">
        <property type="protein sequence ID" value="CTQ74470"/>
        <property type="gene ID" value="LAX5112_03873"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004385">
        <property type="term" value="F:guanylate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00328">
        <property type="entry name" value="Guanylate_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008145">
        <property type="entry name" value="GK/Ca_channel_bsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008144">
        <property type="entry name" value="Guanylate_kin-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017665">
        <property type="entry name" value="Guanylate_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020590">
        <property type="entry name" value="Guanylate_kinase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00625">
        <property type="entry name" value="Guanylate_kin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00072">
        <property type="entry name" value="GuKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03263">
        <property type="entry name" value="guanyl_kin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00856">
        <property type="entry name" value="GUANYLATE_KINASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50052">
        <property type="entry name" value="GUANYLATE_KINASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 9 11" id="KW-0418">Kinase</keyword>
    <keyword evidence="5 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 9 11" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Guanylate kinase-like" evidence="10">
        <location>
            <begin position="21"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="28"/>
            <end position="35"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005790"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00016296"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00030128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00328"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ74470.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="231" mass="26285" checksum="AB9519BFDFA4CF63" modified="2015-12-09" version="1">MTDTAVGTRVTADEAEQQRRGLMLVLSSPSGAGKSTIARLLLEKEDNLELSISATTRPRRSSEVDGVHYHFLDPNRFEQMRAHDELLEWAEVHGNYYATPRGPVENAIENGRDILFDIDIQGTFQLYEKMRDDVVSIFILPPSIAEMKSRLYRRAEDADDVIAKRMKTAVGEMRHWSKYDYVVVNDDLERAYENVRAILKAERLKQARSPKIGSLIQGMVDDLEVELDSKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJX7</accession>
    <name>A0A0M7AJX7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Urease accessory protein UreF</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3 4" type="primary">ureF</name>
        <name evidence="4" type="ORF">LAX5112_03752</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">UreD, UreF and UreG form a complex that acts as a GTP-hydrolysis-dependent molecular chaperone, activating the urease apoprotein by helping to assemble the nickel containing metallocenter of UreC. The UreE protein probably delivers the nickel.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the UreF family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74083.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673075.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03752"/>
    <dbReference type="EnsemblBacteria" id="CTQ74083">
        <property type="protein sequence ID" value="CTQ74083"/>
        <property type="gene ID" value="LAX5112_03752"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016151">
        <property type="term" value="F:nickel cation binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006807">
        <property type="term" value="P:nitrogen compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.4190.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01385">
        <property type="entry name" value="UreF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002639">
        <property type="entry name" value="UreF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038277">
        <property type="entry name" value="UreF_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01730">
        <property type="entry name" value="UreF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF009467">
        <property type="entry name" value="Ureas_acces_UreF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3" id="KW-0143">Chaperone</keyword>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="1 3" id="KW-0996">Nickel insertion</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022988"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01385"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ74083.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="241" mass="25510" checksum="E08B4726867A201B" modified="2015-12-09" version="1">MTGSVTQSALYRLLTFLSPAFPIGAFTYSHGLEQVIHAGGVSSAEELRIWLKDILANGAGRSDAILMSQTYRAAIAGSHDGVRELAELGLALQPSKERHLETSAQGTAFVDTVIASWPPNSQTIAGAVFSSLTNGNSETPLTEWPYPVALGLICAAHELPEDASLTAFLHSFTANLISAAVRAVPLGQNEGQRVLATLEPVISEVPAEAMDAGLDDLGTSTFLADIASMAHETQYSRLFRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKC2</accession>
    <name>A0A0M7AKC2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04027</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74892.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74892">
        <property type="protein sequence ID" value="CTQ74892"/>
        <property type="gene ID" value="LAX5112_04027"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ74892.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="159" mass="17947" checksum="DACB2844EBA8A20C" modified="2015-12-09" version="1">MFLAFVDQGLQHVALRREPEAVVNQLGVARHQLVFEVACAAIERNRFHGPVRLQQDRTARGLIDAAALHADKPVFDHVQAANAVVAAIVVELCEQCGRGHFFAVQRNRVTFFEADLDFCDNVRGFSRVNGALEYIVRRFLVRVFQNLSFGRRVQHVGVH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKG8</accession>
    <name>A0A0M7AKG8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Betaine aldehyde dehydrogenase</fullName>
            <ecNumber evidence="5">1.2.1.8</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">betB_3</name>
        <name evidence="5" type="ORF">LAX5112_04304</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="3">Belongs to the aldehyde dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.2.1.8" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000022">
        <property type="protein sequence ID" value="CTQ75618.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673533.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000022.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75618">
        <property type="protein sequence ID" value="CTQ75618"/>
        <property type="gene ID" value="LAX5112_04304"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008802">
        <property type="term" value="F:betaine-aldehyde dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.309.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.605.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016161">
        <property type="entry name" value="Ald_DH/histidinol_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016163">
        <property type="entry name" value="Ald_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029510">
        <property type="entry name" value="Ald_DH_CS_GLU"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016162">
        <property type="entry name" value="Ald_DH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015590">
        <property type="entry name" value="Aldehyde_DH_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00171">
        <property type="entry name" value="Aldedh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53720">
        <property type="entry name" value="SSF53720"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00687">
        <property type="entry name" value="ALDEHYDE_DEHYDR_GLU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 3 5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aldedh" evidence="4">
        <location>
            <begin position="25"/>
            <end position="479"/>
        </location>
    </feature>
    <feature type="active site" evidence="2">
        <location>
            <position position="256"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU003345"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ75618.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="484" mass="50859" checksum="89A74ABAF034D541" modified="2015-12-09" version="1">MRNELDLWFDPAKCLINGEWTAPLGGGTLPLYNPSTGEEIGAIARGTSKDIDAAVAAAEAARHGAWGKTTAVERGRILFKLRELVLEKVEELARIEAIDVGKPLKQARADAIALARYLEFYGGAADKLHGETIPYLDGYTVYTLREPHGVTGHIVPWNYPMQIIGRSIGAALATGNACVLKPAEDACLTALAFADLAKAAGLPDGVLNVVPGLGSEAGTALSSHPGIHHVSFTGSVATGVHIQTAAAKNVIPVTLELGGKSPQLVFDDADLDAALPFLVNAGIQNAGQTCSASSRILVQRGLYDQVVERMAGRYGALKVGPALSDLDVGPLISKKQQGIVSTFIDRGADLEKAAEGVLKDAPEGGSYVTPTLFAGVKPDHVLARDEIFGPVQVIIPFDDEDEAVAIANGTDYGLVASIWSRDGARQMRLAKKIRTGQVFINNYGAGGGVELPFGGMGKSGHGREKGFEALYGFTTLKTVAAYHG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKH0</accession>
    <name>A0A0M7AKH0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Sulfur carrier protein MoaD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">moaD</name>
        <name evidence="1" type="ORF">LAX5112_04126</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75147.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673440.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04126"/>
    <dbReference type="EnsemblBacteria" id="CTQ75147">
        <property type="protein sequence ID" value="CTQ75147"/>
        <property type="gene ID" value="LAX5112_04126"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012675">
        <property type="entry name" value="Beta-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016155">
        <property type="entry name" value="Mopterin_synth/thiamin_S_b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003749">
        <property type="entry name" value="ThiS/MoaD-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02597">
        <property type="entry name" value="ThiS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54285">
        <property type="entry name" value="SSF54285"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ75147.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="83" mass="9213" checksum="F1DA28985274088D" modified="2015-12-09" version="1">MNIRYFAWVRERVGVEEEAIELPPSVVTVADLIGHLKTIDDNHAFAFEDEEAIRVALDQMHVEADAELGDAKEAAFFPPMTGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKL9</accession>
    <name>A0A0M7AKL9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Carnitinyl-CoA dehydratase</fullName>
            <ecNumber evidence="2">4.2.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">caiD</name>
        <name evidence="2" type="ORF">LAX5112_04322</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the enoyl-CoA hydratase/isomerase family.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000022">
        <property type="protein sequence ID" value="CTQ75668.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673544.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000022.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04322"/>
    <dbReference type="EnsemblBacteria" id="CTQ75668">
        <property type="protein sequence ID" value="CTQ75668"/>
        <property type="gene ID" value="LAX5112_04322"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029045">
        <property type="entry name" value="ClpP/crotonase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018376">
        <property type="entry name" value="Enoyl-CoA_hyd/isom_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001753">
        <property type="entry name" value="Enoyl-CoA_hydra/iso"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00378">
        <property type="entry name" value="ECH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52096">
        <property type="entry name" value="SSF52096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00166">
        <property type="entry name" value="ENOYL_COA_HYDRATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU003707"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75668.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="261" mass="28337" checksum="8E0B6B4A6903CF18" modified="2015-12-09" version="1">MTDNPIKTSVTGHILEVTLDRPKANAIDLKTSRIMGDIFTDFRDNPDLRVAIVTGAGEKFFCPGWDLKAAAGGDAVDGDYGKGGFGGLQELRGLNKPVIAAVNGICCGGGLELALSADIILAADHATFALPEIRSGTVADAASIKLPKRIPYHIAMEMLLTGRWIEVEEAARWGLVNHVLPAADLMSEARKMAELLASGPPLVYAAIKEVVREAEDMKFQDAMNRITKSQFETVERLYRSDDQLEGARAFAEKRDPVWKGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKU4</accession>
    <name>A0A0M7AKU4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Sirohydrochlorin cobaltochelatase</fullName>
            <ecNumber evidence="4">4.99.1.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">cbiX</name>
        <name evidence="4" type="ORF">LAX5112_04348</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="4.99.1.3" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75755.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673570.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000023.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04348"/>
    <dbReference type="EnsemblBacteria" id="CTQ75755">
        <property type="protein sequence ID" value="CTQ75755"/>
        <property type="gene ID" value="LAX5112_04348"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016852">
        <property type="term" value="F:sirohydrochlorin cobaltochelatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002762">
        <property type="entry name" value="CbiX-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01903">
        <property type="entry name" value="CbiX"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 4" id="KW-0456">Lyase</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="285"/>
            <end position="341"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="285"/>
            <end position="309"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="3">
        <location>
            <begin position="310"/>
            <end position="334"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ75755.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="394" mass="43586" checksum="A7BFC06D9E9659AA" modified="2015-12-09" version="1">MSKTGIMICGHGSRAKIAEEEFALLAKGLRDRYPETPVEFGFLEYSAPNIHMGLDSLRDQGVTHILAVPGMLFAATHAKNDIPSVLTTYQGKNPGLTVSYGRELGLHPQMIAAFEARILEALGLTHVHDGDLYDTMLVVVGRGTSDTLANAEAARLTRIVTENLGFGWSETVYSGVTFPSVGRGLEMALKLGYKKIVVAPYFLFSGRLIDRIYNYVDRVAEDQLDVTFYKAHYLADQAHVIDTFVERITEAAEGSLVETTDLMASFKERLARGEVDVHHHHAEYRDPQDDEAGGSDHDHVHDHDHSHDHSHGHGHHHHHGHGHDHSHGHSHGVYKHIAHPNGPRTMIDQGVCCCFMGQFPQEVIDEERDLRKGLGIAPTVPEKLPACAPKRKTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AL27</accession>
    <name>A0A0M7AL27_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04205</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75367.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008194991.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04205"/>
    <dbReference type="EnsemblBacteria" id="CTQ75367">
        <property type="protein sequence ID" value="CTQ75367"/>
        <property type="gene ID" value="LAX5112_04205"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009534">
        <property type="entry name" value="DUF1153"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010921">
        <property type="entry name" value="Trp_repressor/repl_initiator"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06627">
        <property type="entry name" value="DUF1153"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48295">
        <property type="entry name" value="SSF48295"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ75367.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="91" mass="10299" checksum="B42871869FF4C155" modified="2015-12-09" version="1">MTEQIRSRVKYVIGPDGSPLTIADLPPTSTKRWVIRRKAEVVAAVRGGLLSLEEACQRYTLTVEEFLSWQSSIEKHGLAGLRATRIQQYRN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMS2</accession>
    <name>A0A0M7AMS2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Gamma-glutamylputrescine oxidoreductase</fullName>
            <ecNumber evidence="2">1.4.3.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">puuB_4</name>
        <name evidence="2" type="ORF">LAX5112_04115</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.4.3.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ75093.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673373.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04115"/>
    <dbReference type="EnsemblBacteria" id="CTQ75093">
        <property type="protein sequence ID" value="CTQ75093"/>
        <property type="gene ID" value="LAX5112_04115"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006076">
        <property type="entry name" value="FAD-dep_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01266">
        <property type="entry name" value="DAO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DAO" evidence="1">
        <location>
            <begin position="35"/>
            <end position="382"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01266"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75093.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="431" mass="47464" checksum="BC7BCE817FACA489" modified="2015-12-09" version="1">MGSDVFAADYKTTPYWQDIAPKVSLPKQELPDEIDVLIIGAGYTGLNAALQTASDGLGTLVIDAEHPGWGCSLRNGGQLSTSLKPSFSALSGRYGDELATALCQEGQASLDYMHQLSADGLEMGLKEVGRFHGAHKPHLYDKLAKEAASRHPVWKPDAFMVSKEDMASELRTDAYHGGIVFPHHCSVDVSKYHPALLKRVLETGAHVIGDCRALSLERTGSGFKVLTERSEIRAGKVILATNGYSGPLSPWHQRRVIPIGSYVIATEELPTDLVDRLFPTDRILSDTRKLVYYYRLSPDRKRVLFGGRVSLSETDPRNSAVKLHQEMCALFPELRPFKVSHGWMGFVGYTFDTLAHCGEDKGLFYANGYCGSGVGMASYLGMRIGLKAAGRETMPSAFEMIPNPTRPFYTGNPWFLAPSVMVYRIRDRLGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AN71</accession>
    <name>A0A0M7AN71_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative NAD(P)H nitroreductase</fullName>
            <ecNumber evidence="2">1.-.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04469</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.-.-.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ76107.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673692.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000024.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76107">
        <property type="protein sequence ID" value="CTQ76107"/>
        <property type="gene ID" value="LAX5112_04469"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.109.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029479">
        <property type="entry name" value="Nitroreductase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000415">
        <property type="entry name" value="Nitroreductase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00881">
        <property type="entry name" value="Nitroreductase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55469">
        <property type="entry name" value="SSF55469"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nitroreductase" evidence="1">
        <location>
            <begin position="36"/>
            <end position="205"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00881"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76107.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="233" mass="26142" checksum="1C3287E804224A47" modified="2015-12-09" version="1">MIDKSTLVYTAVPMPDRRAISDEDMRQRAYEFLEDVRTRHTVRQFSDKPVERSVIETCVRAAGTAPSGANHQPWHFVAIRNPDLKRQIREAAEEEERKFYDGGAGDAWIKALEPIGTNAHKPHLEIAPWLIVIFAQRWGTYEDGTRYKHYYVPESVGIATGVLITALHHAGLSTLTHTPNPMRFLNDILDRPEAEKPVMILAAGHPATDATVPAAAKIKKPLKEILSVFDTEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANY6</accession>
    <name>A0A0M7ANY6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Glycine betaine-binding periplasmic protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">proX_2</name>
        <name evidence="4" type="ORF">LAX5112_04651</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000027">
        <property type="protein sequence ID" value="CTQ76609.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673832.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000027.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04651"/>
    <dbReference type="EnsemblBacteria" id="CTQ76609">
        <property type="protein sequence ID" value="CTQ76609"/>
        <property type="gene ID" value="LAX5112_04651"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007210">
        <property type="entry name" value="ABC_Gly_betaine_transp_sub-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04069">
        <property type="entry name" value="OpuAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809564" evidence="2">
        <location>
            <begin position="24"/>
            <end position="321"/>
        </location>
    </feature>
    <feature type="domain" description="OpuAC" evidence="3">
        <location>
            <begin position="26"/>
            <end position="309"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF04069"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ76609.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="321" mass="35002" checksum="C713EDAE8C18E9E2" modified="2015-12-09" version="1">MNTSLKSITLATAISVMTLPAFAAEEVKIGVPSWTGAQAIAHLLGAVVEMRIGGKAEMIPGNNATIFQAMDQGKGDIDVHPDVWLPNQESFTKKYVDEAGTVTLSSNPYEGNQGFCVSKDFGEANNITDIADLGRPDVAAIMDSDGNGKGEMWIGAPGWASANVNEVKVRDYGLMDFIEPIRAEESVKTARVKDSIAKGEGYAFYCYKPHAIWYMFDVKMLTEPAYDPAKYVMVQPSDDADWFSKSNVATKDALKKVQIAWSNSLADRSPAIAEFFANFSLSADDVSNFAYEISGKGREPAEVAKEWVKANPDRVDEWLGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AP73</accession>
    <name>A0A0M7AP73_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Putative membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04674</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000028">
        <property type="protein sequence ID" value="CTQ76689.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673857.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000028.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76689">
        <property type="protein sequence ID" value="CTQ76689"/>
        <property type="gene ID" value="LAX5112_04674"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009200">
        <property type="entry name" value="DUF1269_membrane"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06897">
        <property type="entry name" value="DUF1269"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ76689.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="178" mass="18303" checksum="7CD7A2AB8E98E731" modified="2015-12-09" version="1">MGELVIIIFEKQDAAKKVLDQLKKRSFQGIVDLEGAVVAERDELGITKVSNLGNIALEHSAGGTAFGVILGTVFGGIAGAGPVGAGIGAAIGAGAGIVTGLFEQASDENDVLRDIAKELKPESSALGVVLFVNDMDRATLLADLEGLDGKVIRSTLSAKNKADLVKQLEQNSGAKFSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APF4</accession>
    <name>A0A0M7APF4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Autoinducer 2-degrading protein LsrG</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">lsrG</name>
        <name evidence="2" type="ORF">LAX5112_04579</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000026">
        <property type="protein sequence ID" value="CTQ76391.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008195368.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000026.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04579"/>
    <dbReference type="EnsemblBacteria" id="CTQ76391">
        <property type="protein sequence ID" value="CTQ76391"/>
        <property type="gene ID" value="LAX5112_04579"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007138">
        <property type="entry name" value="ABM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03992">
        <property type="entry name" value="ABM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51725">
        <property type="entry name" value="ABM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABM" evidence="1">
        <location>
            <begin position="2"/>
            <end position="91"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51725"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76391.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="96" mass="11159" checksum="3AE949B67E1CFE1D" modified="2015-12-09" version="1">MFVVTVTFQIKPDQFEAFLPLMVQNAQASLTKEDGCRQFDVCTDENRPEEVFLYEVYEDEAAFQVHLTTPHFLKFDAEVAEMIREKTVKTYKGVSQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APP0</accession>
    <name>A0A0M7APP0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04519</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000025">
        <property type="protein sequence ID" value="CTQ76210.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76210">
        <property type="protein sequence ID" value="CTQ76210"/>
        <property type="gene ID" value="LAX5112_04519"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ76210.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="73" mass="8146" checksum="985E49AC71A990C7" modified="2015-12-09" version="1">MLQKRDGILPVEAPIRKMRVAQENDLMAGLAVVFVDVFKDKMVAAQGDPRTEFFQKLPLQRIAPSLAEFNSSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APU6</accession>
    <name>A0A0M7APU6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">D-ribose-binding periplasmic protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">rbsB_4</name>
        <name evidence="3" type="ORF">LAX5112_04595</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000026">
        <property type="protein sequence ID" value="CTQ76436.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673786.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000026.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04595"/>
    <dbReference type="EnsemblBacteria" id="CTQ76436">
        <property type="protein sequence ID" value="CTQ76436"/>
        <property type="gene ID" value="LAX5112_04595"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025997">
        <property type="entry name" value="SBP_2_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13407">
        <property type="entry name" value="Peripla_BP_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809515" evidence="1">
        <location>
            <begin position="25"/>
            <end position="318"/>
        </location>
    </feature>
    <feature type="domain" description="Peripla_BP_4" evidence="2">
        <location>
            <begin position="30"/>
            <end position="276"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13407"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ76436.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="318" mass="34261" checksum="4AED5A1A23AFFCED" modified="2015-12-09" version="1">MLGRKTLGAMALTGLIALSGTAVAEEKIKIGVSYPTPTHAWAAGMNWHAEQAEKRLEALYPDVDLILVNSPDPGAQASALEDLVSVHQIDALVVLPFESEPLTDPVLNVKKSGAWITVVDRGLSQPGIEDLYVAGNNPELGRVSAQYMKGRLKNGDNIVVLRGIPTVIDNERFDAFMAEIEGSGINILDHKHANWNRDDGFEVMQDFLSRFPDIDAVWAQDDDIAIGVVAALKQAGREGNGMFVVGGAGMKEIIKGIMDGDELIPVNVLYPPAMIATAMDATVNAFKSNGPVAGRYILGATLITRENAESYYFPESPF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQ38</accession>
    <name>A0A0M7AQ38_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative teichuronic acid biosynthesis glycosyltransferase TuaC</fullName>
            <ecNumber evidence="2">2.4.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">tuaC</name>
        <name evidence="2" type="ORF">LAX5112_04699</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.4.-.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000028">
        <property type="protein sequence ID" value="CTQ76757.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673880.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000028.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04699"/>
    <dbReference type="EnsemblBacteria" id="CTQ76757">
        <property type="protein sequence ID" value="CTQ76757"/>
        <property type="gene ID" value="LAX5112_04699"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016757">
        <property type="term" value="F:glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001296">
        <property type="entry name" value="Glyco_trans_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00534">
        <property type="entry name" value="Glycos_transf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glycos_transf_1" evidence="1">
        <location>
            <begin position="223"/>
            <end position="382"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00534"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76757.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="410" mass="44325" checksum="FF2607FB646FDDE1" modified="2015-12-09" version="1">MPDNGAIGYILNTYPVPSATFIRREIHALEDLGFKVTPFACRRFAGDLVDPKDRSEAARTEYLLDGKLADLLLASIRELLTNITGVWRTLPIWKQLLSNAGGGFVRHVAYLMQAASLRQKASRAGIRHLHAHFGTNATAIAMLAHSLGGPNYSFTAHGPNEFENPAAQSFALKIQNATFVLAISDYCKNLLTSFTQGAEDIEKIHIARCGIELADYSPQPPVSATNNTFVCVGRLCPEKGQVHIPAAVSALKADFPDIKVILVGDGESRADVEAAIKKHAAEDHVILHGWGSNLEVQDFIKSSRALVLPSYAEGLPIVLMEALALTRPVITTTIAGIPELVNTSCGWLIEPGDEPALAEAFRSALSADPETLKAMGDAGRQRVTSMHDISELAEKLAEKLNPACDRRAHP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQ91</accession>
    <name>A0A0M7AQ91_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Hydrogen cyanide synthase subunit HcnC</fullName>
            <ecNumber evidence="2">1.4.99.5</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">hcnC_1</name>
        <name evidence="2" type="ORF">LAX5112_04343</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.4.99.5" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75744.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673567.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000023.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04343"/>
    <dbReference type="EnsemblBacteria" id="CTQ75744">
        <property type="protein sequence ID" value="CTQ75744"/>
        <property type="gene ID" value="LAX5112_04343"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050622">
        <property type="term" value="F:glycine dehydrogenase (cyanide-forming) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006076">
        <property type="entry name" value="FAD-dep_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01266">
        <property type="entry name" value="DAO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DAO" evidence="1">
        <location>
            <begin position="9"/>
            <end position="350"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01266"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75744.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="388" mass="41957" checksum="BBA9019E34F63A8F" modified="2015-12-09" version="1">MASTSERYDLAIAGAGIFGLSIAYAGLKAGLKVAVVEAHHVGAGASGGLLGALMPHMPARWNPKKEFQFQALSSLSGHIRDLEQLSGVNCGYKRLGRILPLTTQDKLDHHLERAEESKQRWHPEDTGFSYVVEPQGSRSDWLSADAAPYGIVFETLAARVAPRLYLKALASFVAEQGLLLEETGVTGFDEAKDEVHLSDGQTLNARNFVIAGGHGAFDLIETLTGEAIGRGEKGQALLMDGRGLENRPAIYCDGLYVVPHDDGTVAIGSTSDRTAQDTEVDQDRSTDLIRRATAFCPSLKARKVLTEWAGIRPRCNKRDPLVGALPGMERTFAATGGFKISYGIAHLIAEAMIAEFSGVSPRIPLPETFSPDHHFGLNRLDADRTVRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AR22</accession>
    <name>A0A0M7AR22_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04961</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000037">
        <property type="protein sequence ID" value="CTQ77578.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674100.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000037.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77578">
        <property type="protein sequence ID" value="CTQ77578"/>
        <property type="gene ID" value="LAX5112_04961"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ77578.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="495" mass="56364" checksum="39AEBB94748E4289" modified="2015-12-09" version="1">MGEAKRRRDREKLLNVHSKPIKRARFNLLTTGTRLSTTAYMCEELSWWASQEENLLGLVARDTTDDDYLWMVLARDKIGRFRCASLDASIRTKQNAERQLRAEMAEVFISGKVAEFGEQGDETNSPLDPFEISDDLDRDKLHPYFKMLADEPGRAPARKVIKELALWLAPKDPHFVREFQTNGFDQRLWELFLWAAFREFFLDVEQLDAPDFRCTAPGIDFTVEATTVAPSQAGVLKDHPNPSNQEEMRAFLRDYMPMKFGGALTSKLNKKNAGGKSYWEREESKDKPFVIAIADFHKPSDEENPGPMTYTQSALWQYLYGSRVTWRFEDDQLIIDTHEIDEHEFNGKKVPSGFFDLPDAENVSAVVFSNAGTIAKFDRMGTAAGFGAEGFGYFRMGYKPNPDPNAIIGEPFHVDVCDPDYEEFWTQEIQVFHNPNAKFPLPTEALLGATHHFFEAGQFRSLTPEDAVLSSMTLLVKYVDGPDDVTESRKGNLDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AR79</accession>
    <name>A0A0M7AR79_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Polysaccharide export protein EpsE</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_04697</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000028">
        <property type="protein sequence ID" value="CTQ76750.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04697"/>
    <dbReference type="EnsemblBacteria" id="CTQ76750">
        <property type="protein sequence ID" value="CTQ76750"/>
        <property type="gene ID" value="LAX5112_04697"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015159">
        <property type="term" value="F:polysaccharide transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003715">
        <property type="entry name" value="Poly_export"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02563">
        <property type="entry name" value="Poly_export"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="166"/>
            <end position="193"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="247"/>
            <end position="347"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ76750.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="433" mass="48051" checksum="95F4E9A7C0371A9B" modified="2015-12-09" version="1">MGFNPDTTARRYPLRIIGLLLVLFMALPMFILGGSIPTKADEYRLGIQDRLRIYVAEWPALTNEFEVGASGSVVLPIVGEVNAAGLAPRELALEIAERLQEQAKLRSLPNVAVDISAYRPFYILGAVTSPGEYAYRPGMLVLNALSIAGGVYRPPSQSEWGLESSAINTLGELRTLRSEAADLEAERVRYEAQAKGETVFPPLPEDAPPNLTRALAEQAQLFRASLQRFKNEKKSLTAAITLFEGQITLLNQQLEDAKLKLDSFQTELEKIQDLIKQGYGSPRLLPLNREIADGQLERKRLEVELLRAEQELEAARIELRDHEANYLDDAETQLVRIRSELRANQERVKTRESLVNSASGFTDRQRPNSEISLPQSLTFTIIRTVDGEVQTRNAEETTSVNPGDIVKVARFGDDDLSGAIPQRVSSGSLRLGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARR6</accession>
    <name>A0A0M7ARR6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">DNA utilization protein GntX</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_04834</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000032">
        <property type="protein sequence ID" value="CTQ77201.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04834"/>
    <dbReference type="EnsemblBacteria" id="CTQ77201">
        <property type="protein sequence ID" value="CTQ77201"/>
        <property type="gene ID" value="LAX5112_04834"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd06223">
        <property type="entry name" value="PRTases_typeI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2020">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044005">
        <property type="entry name" value="DZR_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000836">
        <property type="entry name" value="PRibTrfase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029057">
        <property type="entry name" value="PRTase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18912">
        <property type="entry name" value="DZR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00156">
        <property type="entry name" value="Pribosyltran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53271">
        <property type="entry name" value="SSF53271"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DZR_2" evidence="2">
        <location>
            <begin position="18"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="domain" description="Pribosyltran" evidence="1">
        <location>
            <begin position="168"/>
            <end position="255"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00156"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF18912"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ77201.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="258" mass="28507" checksum="B719934A8CD54D6D" modified="2015-12-09" version="1">MTGKTVVPLPVMAVGEYLLNAFLPMRCPCCDRGVASGLGLCGTCWQQIRFLERPWCQRMGTPFTHDVGENALSPRAIADPPEFDRLRAVAFYSGPAKDLVLALKFARRRELAEAMGIWMARSGNEFLGDSLVIPVPLHWTRLWQRRFNQAADLARVAADISGAEYAPFVLKRTKRTQQQVGLPAKERIRNVRRAFQVPGDQLQKLAGRRVVLVDDVYTTGSTISACTKVLKSAGAGTVDVLTFALADPANHEDVDRPD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARY0</accession>
    <name>A0A0M7ARY0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative oxidoreductase YdgJ</fullName>
            <ecNumber evidence="3">1.-.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ydgJ_1</name>
        <name evidence="3" type="ORF">LAX5112_04560</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.-.-.-" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000026">
        <property type="protein sequence ID" value="CTQ76334.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673754.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000026.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04560"/>
    <dbReference type="EnsemblBacteria" id="CTQ76334">
        <property type="protein sequence ID" value="CTQ76334"/>
        <property type="gene ID" value="LAX5112_04560"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004104">
        <property type="entry name" value="Gfo/Idh/MocA-like_OxRdtase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000683">
        <property type="entry name" value="Gfo/Idh/MocA-like_OxRdtase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01408">
        <property type="entry name" value="GFO_IDH_MocA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02894">
        <property type="entry name" value="GFO_IDH_MocA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GFO_IDH_MocA" evidence="1">
        <location>
            <begin position="4"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="domain" description="GFO_IDH_MocA_C" evidence="2">
        <location>
            <begin position="146"/>
            <end position="371"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01408"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02894"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ76334.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="385" mass="42080" checksum="789368B482470CED" modified="2015-12-09" version="1">MARLNWGMIGGGEGSQIGPAHRLGAGLDGAFSFVAGALDHRPEAGREYGQRLGLAADRAYGDWREMLDGEKGREDRVDLVTVATPNATHFEITKAFLENGFHVLCEKPMTMTVEEGEEIVRISKETGNICAVNYGYTGYSLVRHMKAMVARGDLGKIRLVKTEFAHGHHADAADADNPRVRWRYDPAQAGVSAQFADCGIHALHMASFVTGQEVKRLSADTVSCISSRELEDDAMVNFRMDGGAVGRLWTSSVAIGRQHGLTLQIFGEKGGLRWSQEQPNQLYWMPLNGRMEIIERGEGGLSPEADRTSRVTIGHAEGMPLAFANIYTDLAEAIQARKSGRTMDPAADLYPRAEDGLRSMAAVFAVADSGKREGVWVDARPPMFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AS43</accession>
    <name>A0A0M7AS43_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">N-acyl homoserine lactonase</fullName>
            <ecNumber evidence="2">3.1.1.81</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">Y2-aiiA</name>
        <name evidence="2" type="ORF">LAX5112_04580</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.1.81" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000026">
        <property type="protein sequence ID" value="CTQ76394.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673769.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000026.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04580"/>
    <dbReference type="EnsemblBacteria" id="CTQ76394">
        <property type="protein sequence ID" value="CTQ76394"/>
        <property type="gene ID" value="LAX5112_04580"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102007">
        <property type="term" value="F:acyl-L-homoserine-lactone lactonohydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.15.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001279">
        <property type="entry name" value="Metallo-B-lactamas"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036866">
        <property type="entry name" value="RibonucZ/Hydroxyglut_hydro"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00753">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00849">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56281">
        <property type="entry name" value="SSF56281"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lactamase_B" evidence="1">
        <location>
            <begin position="36"/>
            <end position="236"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76394.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="264" mass="29908" checksum="6AA87FB636460A2F" modified="2015-12-09" version="1">MSPWEVYAVKYAERNARTRRDSFLFDDNHDQPHDMDYFIWVLRRGDELILVDTGYDHEEADRRGRPVLKDPREALLPLGISPDKVTTIIVTHLHYDHAGGLKHFPNATIHLQAAEMAYATGPCMCHPVLKAPFTGEHVCEAVLRLYSGRTTFHEGDGEVAEGVTVHRIGGHSKGLQAVRVLTSAGWLCLASDAAHYYENFLKEKPFPIVVDLQEMLNGFRRIRTLASDDRLVIPGHDPLVRKRFPIFGADHILRLDRGPSEEAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASS7</accession>
    <name>A0A0M7ASS7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Membrane-bound lytic murein transglycosylase F</fullName>
            <ecNumber evidence="9">4.2.2.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">mltF_2</name>
        <name evidence="9" type="ORF">LAX5112_05018</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell outer membrane</location>
            <topology evidence="2">Peripheral membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the virb1 family.</text>
    </comment>
    <dbReference type="EC" id="4.2.2.-" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000041">
        <property type="protein sequence ID" value="CTQ77697.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674140.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000041.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77697">
        <property type="protein sequence ID" value="CTQ77697"/>
        <property type="gene ID" value="LAX5112_05018"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009279">
        <property type="term" value="C:cell outer membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023346">
        <property type="entry name" value="Lysozyme-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008258">
        <property type="entry name" value="Transglycosylase_SLT_dom_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01464">
        <property type="entry name" value="SLT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00062">
        <property type="entry name" value="PBPb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53955">
        <property type="entry name" value="SSF53955"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0998">Cell outer membrane</keyword>
    <keyword evidence="6 9" id="KW-0456">Lyase</keyword>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="7">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809923" evidence="7">
        <location>
            <begin position="22"/>
            <end position="473"/>
        </location>
    </feature>
    <feature type="domain" description="PBPb" evidence="8">
        <location>
            <begin position="48"/>
            <end position="288"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004339"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009387"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023237"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="SMART" id="SM00062"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ77697.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="473" mass="53090" checksum="528936BA58196CB3" modified="2015-12-09" version="1">MILRCLFAGMIAIASIAPAQALERGDQLVRAVQEPFLGDFDEMKQDKVVRALISYSLTDYFISDGEEHGLAVEFLRAFDTHINKGIKKETDKIAVVLIPTRRDRLLPDLVEGKGDMVVANLTVTPDRLESVDFADPLHTGVNEVLVTAAAGEKPMSVEDMAGMDIHVRASSSYFESLVQLNETLAAKNLDQIKISEISEFFEDEDLLEMVDTGLIQATIVDDYTADLWAPVFKNLVVHETAPLREDAEIAWAIRKDSPLMKAEVDGFMKTAKVGTELGNILTKRYFSDTNRIVNPKVEAYQEKLEQLMVLFDEMGKKYNIDPYLLAAQAFQESRFNNNAKSRVGAVGIMQLLPSTAKDKSVNIKNFRELEGNIEAGAKYNRFVADTYFPEEDIPEFQKILFVLASYNAGPNRVARVRKTASDPNTWFDSVEWEVAKAAGVEPVKYVKNIYTYYVAFKEFAAFDEARAKLTDEQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AU54</accession>
    <name>A0A0M7AU54_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04870</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000033">
        <property type="protein sequence ID" value="CTQ77313.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674018.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000033.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77313">
        <property type="protein sequence ID" value="CTQ77313"/>
        <property type="gene ID" value="LAX5112_04870"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="23"/>
            <end position="45"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77313.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="253" mass="26862" checksum="6F507DD0CC1BA8D2" modified="2015-12-09" version="1">MSWKQTKDAPFFVGYLNAVPKPLAVFVLVFSLCFAGGMGLAALALSSTQNDPGSGGFQWGNRFEQAGLLELRPYPVFRVPGDDENAARTYMLSGQGKRGVFGPAEANAGTPVTLRGVPVNRGDLTMIQVGNVEATEDGAGNFTPSDAVPLGRWKLAGEICDGKCYAGAMRPGQGLAHKACADLCITGGIPPVFVSTGPVEGRSYFLMADKDGNLLGDEIRDLLALYIEVEGDVERLDDLLVFKADLSTARILK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AUR1</accession>
    <name>A0A0M7AUR1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Putative thiamine pyrophosphate-containing protein YdaP</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ydaP</name>
        <name evidence="7" type="ORF">LAX5112_04874</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the TPP enzyme family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000033">
        <property type="protein sequence ID" value="CTQ77324.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674021.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000033.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04874"/>
    <dbReference type="EnsemblBacteria" id="CTQ77324">
        <property type="protein sequence ID" value="CTQ77324"/>
        <property type="gene ID" value="LAX5112_04874"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051537">
        <property type="term" value="F:2 iron, 2 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030976">
        <property type="term" value="F:thiamine pyrophosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044281">
        <property type="term" value="P:small molecule metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.102.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029035">
        <property type="entry name" value="DHS-like_NAD/FAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017941">
        <property type="entry name" value="Rieske_2Fe-2S"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036922">
        <property type="entry name" value="Rieske_2Fe-2S_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029061">
        <property type="entry name" value="THDP-binding"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012000">
        <property type="entry name" value="Thiamin_PyroP_enz_cen_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012001">
        <property type="entry name" value="Thiamin_PyroP_enz_TPP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011766">
        <property type="entry name" value="TPP_enzyme-bd_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00355">
        <property type="entry name" value="Rieske"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02775">
        <property type="entry name" value="TPP_enzyme_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00205">
        <property type="entry name" value="TPP_enzyme_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02776">
        <property type="entry name" value="TPP_enzyme_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50022">
        <property type="entry name" value="SSF50022"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52467">
        <property type="entry name" value="SSF52467"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52518">
        <property type="entry name" value="SSF52518"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51296">
        <property type="entry name" value="RIESKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0408">Iron</keyword>
    <keyword evidence="4" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0786">Thiamine pyrophosphate</keyword>
    <feature type="domain" description="Rieske" evidence="6">
        <location>
            <begin position="9"/>
            <end position="109"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007812"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU362132"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51296"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ77324.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="658" mass="71145" checksum="924A379686084910" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZN30</accession>
    <name>A0A0M6ZN30_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 11">Protein-export membrane protein SecG</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">secG</name>
        <name evidence="13" type="ORF">LAX5112_00202</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11">Involved in protein export. Participates in an early event of protein translocation.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 11">Cell membrane</location>
            <topology evidence="2 11">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 11">Belongs to the SecG family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64169.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670203.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00202"/>
    <dbReference type="EnsemblBacteria" id="CTQ64169">
        <property type="protein sequence ID" value="CTQ64169"/>
        <property type="gene ID" value="LAX5112_00202"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015450">
        <property type="term" value="F:protein-transporting ATPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009306">
        <property type="term" value="P:protein secretion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004692">
        <property type="entry name" value="SecG"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34182">
        <property type="entry name" value="PTHR34182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03840">
        <property type="entry name" value="SecG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01651">
        <property type="entry name" value="SECGEXPORT"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00810">
        <property type="entry name" value="secG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="10 11" id="KW-0472">Membrane</keyword>
    <keyword evidence="7 11" id="KW-0653">Protein transport</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9 11" id="KW-0811">Translocation</keyword>
    <keyword evidence="6 11" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8 11" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5 11" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="51"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="12">
        <location>
            <begin position="85"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="12">
        <location>
            <begin position="112"/>
            <end position="129"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008445"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00017876"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023010"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU365087"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="CTQ64169.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="129" mass="12455" checksum="402878D255359C3A" modified="2015-12-09" version="1">METVVIVIHLMVVLALVLVVLLQRSEGGALGMGGGGGGGGLMSSRGTANVLTRATAILAVAFFATSLTLSLIASNEDSPASILDAAPAATSDAPAASGADTDTGAGGGGILDSLRQQSQPSGPQVPAAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZNF9</accession>
    <name>A0A0M6ZNF9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00038</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63706.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670099.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00038"/>
    <dbReference type="EnsemblBacteria" id="CTQ63706">
        <property type="protein sequence ID" value="CTQ63706"/>
        <property type="gene ID" value="LAX5112_00038"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="26"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="82"/>
            <end position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ63706.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="117" mass="12760" checksum="2DF29B32315C4503" modified="2015-12-09" version="1">MDTITSNLTHDPLPFFITAPGQTDTLFIAVSIFMVLVLVGFGALYFTVQAWPDRMASGMGKTQIQIVGLLGLLSLITFNNAFWVAALLLAAIPISQIVLPVKVKSLRSGRTGKRRIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZNP4</accession>
    <name>A0A0M6ZNP4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DNA-binding transcriptional activator of the SARP family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00090</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63851.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00090"/>
    <dbReference type="EnsemblBacteria" id="CTQ63851">
        <property type="protein sequence ID" value="CTQ63851"/>
        <property type="gene ID" value="LAX5112_00090"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005158">
        <property type="entry name" value="BTAD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03704">
        <property type="entry name" value="BTAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01043">
        <property type="entry name" value="BTAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="SSF48452"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="BTAD" evidence="1">
        <location>
            <begin position="87"/>
            <end position="225"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM01043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ63851.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="658" mass="73188" checksum="D6637BF1D36176B4" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZNW1</accession>
    <name>A0A0M6ZNW1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Acetyltransferase (GNAT) family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00115</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63922.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670147.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ63922">
        <property type="protein sequence ID" value="CTQ63922"/>
        <property type="gene ID" value="LAX5112_00115"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="10"/>
            <end position="173"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ63922.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="186" mass="21018" checksum="333E8C4B969F30DC" modified="2015-12-09" version="1">MNDNLAVSHPGIRRLWQSDLDRLTQHFQRLDSDTRRLRFAGKVSDGFVDRYAESILSVGAIGYGAFPDHELRGMAELRELHNSWPRAAELALVVERDWQEKGIGKALFNRVIAAAQTRQIKTIHMLCLIENTRMRNLAKRHDANLAIDSGIMEATLSVARPSPIAFLEKLYGDPCNILRANTRLGD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZNX4</accession>
    <name>A0A0M6ZNX4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00121</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63942.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00121"/>
    <dbReference type="EnsemblBacteria" id="CTQ63942">
        <property type="protein sequence ID" value="CTQ63942"/>
        <property type="gene ID" value="LAX5112_00121"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010775">
        <property type="entry name" value="DUF1365"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33973">
        <property type="entry name" value="PTHR33973"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07103">
        <property type="entry name" value="DUF1365"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="260"/>
            <end position="292"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="260"/>
            <end position="275"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="277"/>
            <end position="292"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ63942.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="292" mass="33426" checksum="951E6C5D957DA853" modified="2015-12-09" version="1">MIPLPATNRMSDNGPAPQAAAALYNGVVMHQRMKPKQHRFSYDVFNLLIDIDRLKEATKMSWMFSVNRFNLLSFHEKDHGPRDGSSLRQHIDSLLQKEGLVRAHRVVLLAYPRLLGYGFNPLSVYYAYDEHDRLTALVYEVRNTFGGLHTYVGPVRDGQISDAGVRQDQRKEFYVSPFISMQQRYHFRMLPPGKAVRVRILETDDTGPLLSATFSGAQKPLTTWSLMRAFARVPLLTFKVMAAIHWQAFKIWRKRVPFHPRPANDGRDDSAGRSTAPELWRETTNNISRGSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPL9</accession>
    <name>A0A0M6ZPL9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">HTH-type transcriptional activator AmpR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ampR_1</name>
        <name evidence="3" type="ORF">LAX5112_00167</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64070.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670182.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ64070">
        <property type="protein sequence ID" value="CTQ64070"/>
        <property type="gene ID" value="LAX5112_00167"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00039">
        <property type="entry name" value="HTHLYSR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ64070.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="305" mass="34041" checksum="F1AB45129251C6DC" modified="2015-12-09" version="1">MNWDDLKLVDAAARARSLSGAAKALDISQPQLSRRLKAFEERIGARLFDRTPSGLKPTEAGLRLIPLAADMRQRADAAARIMPDLAGASLRVVRVAVDEVRARVLTDMYPLLDDRLKDIELELISSHSHVDHQSRSIELQIRNCLPETDTLIARKIGDLAYGVYTSKTYAAAHPSVFEEARYTACSWLGFTPDDLWYPAQNRWLAERLPAPPRLRTNTMTTMMNMIASGSGLGLLPVFMGDRHPDLLQVMGPLPELTNPEHIIVHRDVRREPAVRLAIDAISDAYRHMTPHLLGLQSQVKMTAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPS8</accession>
    <name>A0A0M6ZPS8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00189</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64130.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670312.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00189"/>
    <dbReference type="EnsemblBacteria" id="CTQ64130">
        <property type="protein sequence ID" value="CTQ64130"/>
        <property type="gene ID" value="LAX5112_00189"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3700.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023157">
        <property type="entry name" value="AGR-C-984p-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010626">
        <property type="entry name" value="DUF1217"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06748">
        <property type="entry name" value="DUF1217"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF158837">
        <property type="entry name" value="SSF158837"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ64130.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="263" mass="29383" checksum="AC783E2C6737189F" modified="2015-12-09" version="1">MINTLTQVQIVRNNMDRSLATVAADPVVDRQTEYYRENIRNIKSIDDFMADDRIYRYAMTAMGLEDMIYAKAFMRKVLTEGTASRAAFANQLADSKYRNFAETFNFANYGETATSFSRTQEGIVDKFHRQTLEVKEGAQNDGVRLALYFERKASEITGPFDILADRALAETVRTALGLPDAFALTDIDKQAEYFDKHLDYEKLSSDPEYLSKFLERFSAMYDLSNGAQTAAAPTLAVFGPGPGIVPFGEGLLSSIQNFKLGGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRM1</accession>
    <name>A0A0M6ZRM1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">LIV-I protein F</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">livF_2</name>
        <name evidence="6" type="ORF">LAX5112_00419</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64836.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670388.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00419"/>
    <dbReference type="EnsemblBacteria" id="CTQ64836">
        <property type="protein sequence ID" value="CTQ64836"/>
        <property type="gene ID" value="LAX5112_00419"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="5"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="37"/>
            <end position="44"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ64836.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="235" mass="25526" checksum="F9063ECD3AC64A57" modified="2015-12-09" version="1">MTALLSMEAITGGYGDANILEDVSMHVMADEIVVIVGPNGAGKSTAMKSVFGLLNIRGGKMLFDGDDITGWAPNRIVQRGICYVPQVDNIFREMSIHENLEMGGFLKKGDLSAAYDRIYALFPDLKERRKTMAGSLSGGQRQMVAMGRALMLDPKLLLLDEPTAGLSPKYMEQIFQICRDVRDTGVAILLVEQHAKQALAFADRGYVLAAGKNRHEGSGADLLADREVAEMFLGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZS97</accession>
    <name>A0A0M6ZS97_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Stage 0 sporulation protein KE</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">oppF_2</name>
        <name evidence="8" type="ORF">LAX5112_00687</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65588.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670630.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00687"/>
    <dbReference type="EnsemblBacteria" id="CTQ65588">
        <property type="protein sequence ID" value="CTQ65588"/>
        <property type="gene ID" value="LAX5112_00687"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015833">
        <property type="term" value="P:peptide transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013563">
        <property type="entry name" value="Oligopep_ABC_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08352">
        <property type="entry name" value="oligo_HPY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01727">
        <property type="entry name" value="oligo_HPY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ABC transporter" evidence="7">
        <location>
            <begin position="24"/>
            <end position="264"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="56"/>
            <end position="63"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ65588.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="331" mass="36964" checksum="6C6FDE507B5E8FEE" modified="2015-12-09" version="1">MTGDTPLISARSLGAVFDVSKPWLNRMLAMESKRFLTAVDTVDFDIPKGKTFALVGESGSGKSTIGRMIVGLQKPTSGQVLIDGEDFFAIKDQKRKLAMRRRIQMIFQSPYASLNPRWRVRHIIGEPIRAFELMPASEIDKRVSELLDQVGLAKSDGEKFPHEFSGGQRQRIAIARALASNPEFIVCDEPTSALDVSVQSQVLNLMKTLQRELGLTYLFISHDLSVIRYMADEIGVLYLGRLVEVADRDSLFENPRHPYTRMLMDAAPHIDAFGRTAEIVSGEIPDPIDKPKGCSFHPRCTLTEDRCRQERPAVREFDGGKAKVACHLCTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZT71</accession>
    <name>A0A0M6ZT71_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Glutamate-1-semialdehyde 2,1-aminomutase</fullName>
            <ecNumber evidence="3">5.4.3.8</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">hemL</name>
        <name evidence="3" type="ORF">LAX5112_00636</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.</text>
    </comment>
    <dbReference type="EC" id="5.4.3.8" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65462.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670591.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00636"/>
    <dbReference type="EnsemblBacteria" id="CTQ65462">
        <property type="protein sequence ID" value="CTQ65462"/>
        <property type="gene ID" value="LAX5112_00636"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042286">
        <property type="term" value="F:glutamate-1-semialdehyde 2,1-aminomutase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008483">
        <property type="term" value="F:transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00610">
        <property type="entry name" value="OAT_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005814">
        <property type="entry name" value="Aminotrans_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00202">
        <property type="entry name" value="Aminotran_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0413">Isomerase</keyword>
    <keyword evidence="1 2" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU003560"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ65462.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="423" mass="45682" checksum="3777871CA18AAEB8" modified="2015-12-09" version="1">MKTNISQSDWKNRAAEVLPAAGFGNFDPSLILREGKGSRVWDEDGKEYIDYLIGSGPMILGHGHPEVLDAVQEQLGKGMTFFTNNAAGIELAEVLVEAMACVEQVRYVSTGGEADMYAMRLARAFTGKDKILKFEGGYHGMSGEALMSLAPKTLVNFPQAVPDSAGIPESVRDNMLIAPFNDADFVTSLVEEYDGEIACIIVEPLQRLIPPAPGFLQTLRDLATKHGIVLVFDEVVTGFRFAYGGAQEYYGVVPDLCTLGKIIGGGFPLAAIAGRSEIMAHFDKAVVGEKSFTFQIGTLSGNPVASVAGLKTLEILRRPGAYEELKAHGEQLIQSYVAHLSAAGVPHRIVGEPMLFDVVFTEDPVRDYRDTLKNNAAQAKAFNASLRQSGILKPDSKLYAHLALSAEDLQQTDEAIATAARQL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTC1</accession>
    <name>A0A0M6ZTC1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">L-Ala-D/L-Glu epimerase</fullName>
            <ecNumber evidence="2">5.1.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00638</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="5.1.1.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65466.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670593.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00638"/>
    <dbReference type="EnsemblBacteria" id="CTQ65466">
        <property type="protein sequence ID" value="CTQ65466"/>
        <property type="gene ID" value="LAX5112_00638"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.390.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036849">
        <property type="entry name" value="Enolase-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029017">
        <property type="entry name" value="Enolase-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029065">
        <property type="entry name" value="Enolase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013342">
        <property type="entry name" value="Mandelate_racemase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013341">
        <property type="entry name" value="Mandelate_racemase_N_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13378">
        <property type="entry name" value="MR_MLE_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02746">
        <property type="entry name" value="MR_MLE_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00922">
        <property type="entry name" value="MR_MLE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51604">
        <property type="entry name" value="SSF51604"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54826">
        <property type="entry name" value="SSF54826"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0413">Isomerase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MR_MLE" evidence="1">
        <location>
            <begin position="144"/>
            <end position="237"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00922"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65466.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="371" mass="39779" checksum="133B68897E66F5FF" modified="2015-12-09" version="1">MKITKISVWQFDLPLSKPYWLSGGRLKFERLDSTFVRIETDEGLAGWGEGCPWGHTYLPAHGSGLRAALELIAPALIGKDPRALESINRAMDLQLPGHPYAKAPLDIACWDILGKSSSSPLWLLFGAENPAEVAINSSISTGTPDEMIADIQAASARGYKTHSAKVGGNNFKADIDRIEAISEALEPDEQVTFDVNRAWTPGVALQVLNSVAARDWIEQPCETLAECALVAAKVPQPIMLDECLHSFADHLDAWKAGICQGVKVKPNRVGGLTKAKQIRDFGISVGWQMHIEDTGGSAFADTAALHLAAATPEANRLASWLCHAHLAVDPVPGQGARNVEGSVHFDQSPGIGFEPDPEILGDPIAVYGDAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZU16</accession>
    <name>A0A0M6ZU16_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">ABC transmembrane type-1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">LAX5112_00680</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65570.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670625.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00680"/>
    <dbReference type="EnsemblBacteria" id="CTQ65570">
        <property type="protein sequence ID" value="CTQ65570"/>
        <property type="gene ID" value="LAX5112_00680"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1560.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011527">
        <property type="entry name" value="ABC1_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036640">
        <property type="entry name" value="ABC1_TM_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13748">
        <property type="entry name" value="ABC_membrane_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90123">
        <property type="entry name" value="SSF90123"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 4" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2 4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="20"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="55"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="120"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="146"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="211"/>
            <end position="230"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="5">
        <location>
            <begin position="8"/>
            <end position="241"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF13748"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ65570.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="286" mass="32246" checksum="3529FE128D4B7193" modified="2015-12-09" version="1">MRMAIDLAYIFQIFRAKIAITWTIVFAENCLIALIPLLIGLSIDGLLAGRVSELGWMTATLCSLCFLAVGRRIYDTRAYGTIRLHLGDELHRRCSSLHVSRRNARIDMSRELVDFLEHEAPQLIAALIQLGVGLTILTYFDMSLGLSSLLVLAGMLLVYACFHRRFYNVNRQLNEQREQQVDVLTRGERLGIFRHLRTLRRHEVAISDTEAFVYGGIFFLQVGFIVFNLYQAAGLAGITAGRIFSIASYSWEFVEAALTLPIALQSWSRLSEITRRINSNGDLALG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZU34</accession>
    <name>A0A0M6ZU34_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Outer membrane efflux protein BepC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">bepC_2</name>
        <name evidence="3" type="ORF">LAX5112_00937</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66285.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670816.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00937"/>
    <dbReference type="EnsemblBacteria" id="CTQ66285">
        <property type="protein sequence ID" value="CTQ66285"/>
        <property type="gene ID" value="LAX5112_00937"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019867">
        <property type="term" value="C:outer membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015562">
        <property type="term" value="F:efflux transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003423">
        <property type="entry name" value="OMP_efflux"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010130">
        <property type="entry name" value="T1SS_OMP_TolC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02321">
        <property type="entry name" value="OEP"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01844">
        <property type="entry name" value="type_I_sec_TolC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ66285.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="501" mass="55372" checksum="468D54E599DB9A49" modified="2015-12-09" version="1">MTNPNASSKTGKGSRNDRQTLSRLLVASAALVSVMMSGSPLYAQSLEEAMGAAYALNPGLKAERSRYEATNQGVWTARSEFLPTVTGSYIGEHNAFRNTRDTLSSDRAYFHELGVSMSQTLFQGFAGVNRLNQAHEEAQSGRNQLIGAEQTLLFNTADAYLRVVRDRGVLAYLKSYTNVVQREVNAARARYKSGDATRTDIEQALARLAEAQGNKEQAVGDLEASEALYERLTGQKPGKIGWPGIPKTIEPAGLDDAITVAFQNNPSIRAAMNDARAARYAARASVGDMLPRVSLEGEWSNGYRRDFSDRDREDYRLGIRVTAPFFTGGRNIASVKRAKYTAAQEEYELDDTQQIIRENVIRAMKQRAAARLRAKAGVRAIEANKRAVKGLQVEFESGQRTLLNVLDGERELLLSQVDYVRAQYDAKIADFFLLANIGRLAPQHFAIIEERPAPPSRIIPEFNTWDLRLGPTENDPFQSGVIEIAETEPVIIQAEALPPIQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUF9</accession>
    <name>A0A0M6ZUF9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Ribose import ATP-binding protein RbsA</fullName>
            <ecNumber evidence="7">3.6.3.17</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">rbsA_3</name>
        <name evidence="7" type="ORF">LAX5112_00776</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.17" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65841.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670698.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00776"/>
    <dbReference type="EnsemblBacteria" id="CTQ65841">
        <property type="protein sequence ID" value="CTQ65841"/>
        <property type="gene ID" value="LAX5112_00776"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="6">
        <location>
            <begin position="12"/>
            <end position="252"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="6">
        <location>
            <begin position="267"/>
            <end position="510"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="493"/>
            <end position="515"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="44"/>
            <end position="51"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ65841.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="515" mass="54663" checksum="7F6F263B6E99DEEC" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUG8</accession>
    <name>A0A0M6ZUG8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Gamma-D-glutamyl-L-lysine endopeptidase</fullName>
            <ecNumber evidence="5">3.4.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ykfC</name>
        <name evidence="5" type="ORF">LAX5112_00532</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase C40 family.</text>
    </comment>
    <dbReference type="EC" id="3.4.-.-" evidence="5"/>
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</entry>
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</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZV73</accession>
    <name>A0A0M6ZV73_9HYPH</name>
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        <submittedName>
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                <person name="Arahal R.David."/>
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    </dbReference>
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        </source>
    </evidence>
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        <source>
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        </source>
    </evidence>
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        <source>
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    </evidence>
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</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVW9</accession>
    <name>A0A0M6ZVW9_9HYPH</name>
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        <submittedName>
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        </submittedName>
    </protein>
    <gene>
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    </gene>
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        </lineage>
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                <person name="Arahal R.David."/>
            </authorList>
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        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
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            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
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    </dbReference>
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    </dbReference>
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    <dbReference type="EnsemblBacteria" id="CTQ65613">
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    </dbReference>
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        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002491">
        <property type="entry name" value="ABC_transptr_periplasmic_BD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01497">
        <property type="entry name" value="Peripla_BP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50983">
        <property type="entry name" value="FE_B12_PBP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Fe/B12 periplasmic-binding" evidence="1">
        <location>
            <begin position="38"/>
            <end position="293"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50983"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65613.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="294" mass="30992" checksum="AE5541F2FC8FE7BE" modified="2015-12-09" version="1">MITRLRSLYLECVTAALLTATALGLTLHPLSADEASKRVVAVGGSVTEVVFALKEEYRLVARDSTSVHPQEAHDLPDIGYIRALSPEGVLSVDPDLLLMLDGSGPQETVDVLEKSGIAIANVPNEFTPEGIVAKIRTVGSALGVPEKADALAQKIEADLKTAQEQAAGRNDNVRVLFVLSTRGGRIMAGGADTAADGIITLAGAKNAVSEFSGYKQLSDEAILSAMPDIVLMMDREGDHSASADDLFSHPALAQTPAGKANRLLKMPGDYLLGFGPRTADTIQDLAQHLAEIRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVZ6</accession>
    <name>A0A0M6ZVZ6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Exopolysaccharide transport protein family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">LAX5112_00723</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65694.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670658.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00723"/>
    <dbReference type="EnsemblBacteria" id="CTQ65694">
        <property type="protein sequence ID" value="CTQ65694"/>
        <property type="gene ID" value="LAX5112_00723"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032807">
        <property type="entry name" value="GNVR"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13807">
        <property type="entry name" value="GNVR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="47"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="domain" description="GNVR" evidence="4">
        <location>
            <begin position="377"/>
            <end position="451"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="455"/>
            <end position="481"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="201"/>
            <end position="258"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="337"/>
            <end position="364"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF13807"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ65694.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="715" mass="78913" checksum="57131151CD963309" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZW56</accession>
    <name>A0A0M6ZW56_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Protein involved in cellulose biosynthesis (CelD)</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00726</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65703.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670660.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00726"/>
    <dbReference type="EnsemblBacteria" id="CTQ65703">
        <property type="protein sequence ID" value="CTQ65703"/>
        <property type="gene ID" value="LAX5112_00726"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038740">
        <property type="entry name" value="BioF2-like_GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13480">
        <property type="entry name" value="Acetyltransf_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Acetyltransf_6" evidence="1">
        <location>
            <begin position="180"/>
            <end position="325"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13480"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65703.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="371" mass="41885" checksum="45462846AE87CEA7" modified="2015-12-09" version="1">MDHPIVSTEAEYRIEACNTYDFLSEEYSTLFKGSNATAFQSPLWLHEFYHTLVPGHGAEPLIIKISSKGSDHPDAILPLVRETHFGIRIVQPADLGVADYNAIVGSEEKLTALANNPSVAEGILSAIQPYHLILFRKQRPCAFDVAKLLPGANRTPNTSCSYEVDAGAGYDNWFTTSVSKNMRKGLKRKTNGFEKTHGKLEFAELCDERSIVDAFQLMRELREARYEANLFSRPEVFEFYQNIAVKGQRHGIASTFVSKFEDRILSIDFGVRHKSRFLFLLGAFYEEQDFQRYSLGLLGLNELIRREAEAGHTIFDFTIGDEPYKLSFGAEQIPLTNITVTSGPIGRLAFTAYQSRGPFRRTLKKLMPKFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZW59</accession>
    <name>A0A0M6ZW59_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00744</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65754.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008195323.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00744"/>
    <dbReference type="EnsemblBacteria" id="CTQ65754">
        <property type="protein sequence ID" value="CTQ65754"/>
        <property type="gene ID" value="LAX5112_00744"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007495">
        <property type="entry name" value="NqrM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR40691">
        <property type="entry name" value="PTHR40691"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04400">
        <property type="entry name" value="NqrM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ65754.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="76" mass="8166" checksum="C00A03D5684B5A85" modified="2015-12-09" version="1">METFVLAFALLLTVILGMAIGVIFSGRTIKGSCGGLNAISGADHCMVCKKEIDPDSPLRDRLQCPRARKQLAEMEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWG0</accession>
    <name>A0A0M6ZWG0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">CreA protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00947</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66380.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670869.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ66380">
        <property type="protein sequence ID" value="CTQ66380"/>
        <property type="gene ID" value="LAX5112_00947"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010292">
        <property type="entry name" value="Uncharacterised_CreA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37952">
        <property type="entry name" value="PTHR37952"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05981">
        <property type="entry name" value="CreA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF003174">
        <property type="entry name" value="CreA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809016" evidence="1">
        <location>
            <begin position="24"/>
            <end position="171"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66380.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="171" mass="19104" checksum="F8188812790B8A72" modified="2015-12-09" version="1">MRFRTAAILFLSLCMQSAASALANDEPDLIFKKSTVWKFLTPDHKLATYAIDDPLIDGVSCHFTVPEKGGVSGWLGVAEEVSDVSLACRQVGPVQIKENFEQGEEMFRQGRSFMFKKMRIVRGCDVKRNTLVYMVYSDKLIEGSPKNSTSTVPLMPWGTQVPPRCGDYLES</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXN1</accession>
    <name>A0A0M6ZXN1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Oxygen sensor protein DosP</fullName>
            <ecNumber evidence="5">3.1.4.52</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">dosP_2</name>
        <name evidence="5" type="ORF">LAX5112_00936</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.4.52" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66283.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670815.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00936"/>
    <dbReference type="EnsemblBacteria" id="CTQ66283">
        <property type="protein sequence ID" value="CTQ66283"/>
        <property type="gene ID" value="LAX5112_00936"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071111">
        <property type="term" value="F:cyclic-guanylate-specific phosphodiesterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd01948">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01949">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.450">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001633">
        <property type="entry name" value="EAL_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035919">
        <property type="entry name" value="EAL_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000160">
        <property type="entry name" value="GGDEF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005330">
        <property type="entry name" value="MHYT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00563">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00990">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00052">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00267">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141868">
        <property type="entry name" value="SSF141868"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00254">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50883">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50887">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50924">
        <property type="entry name" value="MHYT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="47"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="82"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="109"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="146"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="178"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="216"/>
            <end position="237"/>
        </location>
    </feature>
    <feature type="domain" description="MHYT" evidence="4">
        <location>
            <begin position="12"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="domain" description="GGDEF" evidence="3">
        <location>
            <begin position="283"/>
            <end position="416"/>
        </location>
    </feature>
    <feature type="domain" description="EAL" evidence="2">
        <location>
            <begin position="425"/>
            <end position="675"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50924"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ66283.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="679" mass="74117" checksum="DEEBF9E73236E5D7" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXU0</accession>
    <name>A0A0M6ZXU0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Glutathione import ATP-binding protein GsiA</fullName>
            <ecNumber evidence="8">3.6.3.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">gsiA_2</name>
        <name evidence="8" type="ORF">LAX5112_01406</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.-" evidence="8"/>
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        <property type="protein sequence ID" value="CTQ67509.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671241.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01406"/>
    <dbReference type="EnsemblBacteria" id="CTQ67509">
        <property type="protein sequence ID" value="CTQ67509"/>
        <property type="gene ID" value="LAX5112_01406"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015833">
        <property type="term" value="P:peptide transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
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        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013563">
        <property type="entry name" value="Oligopep_ABC_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08352">
        <property type="entry name" value="oligo_HPY"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ABC transporter" evidence="7">
        <location>
            <begin position="9"/>
            <end position="259"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="7">
        <location>
            <begin position="281"/>
            <end position="521"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="45"/>
            <end position="52"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="313"/>
            <end position="320"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
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            <dbReference type="ARBA" id="ARBA00004417"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ67509.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="550" mass="60533" checksum="3BD6E1C70460E4FF" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXY7</accession>
    <name>A0A0M6ZXY7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Phosphoglycerate transporter family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_00952</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66394.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00952"/>
    <dbReference type="EnsemblBacteria" id="CTQ66394">
        <property type="protein sequence ID" value="CTQ66394"/>
        <property type="gene ID" value="LAX5112_00952"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="50"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="144"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="170"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="220"/>
            <end position="243"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="255"/>
            <end position="278"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
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            <end position="304"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="310"/>
            <end position="332"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="344"/>
            <end position="365"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="377"/>
            <end position="394"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="6">
        <location>
            <begin position="13"/>
            <end position="399"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="EMBL" id="CTQ66394.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="407" mass="43582" checksum="EF7DD88FCF2350D0" modified="2015-12-09" version="1">MTYLTFLQTNARWLAGGFLLTAFSGFGQTFYIALSSGHLREEFQLSHGDFGLLYMAATLASAVSLPWIGRSVDVFPVRFVGLVTCVSLGIFCLSMALVNSVFMLFVVLFGLRLSGQGMMTHVSMTAMGRWYSAQRGRAVSVAQMGFPIAESLFPASFVLISAIVGWRTSWALAAGIMVLGALPLLALLFAKDRIPRSDEQDAGLIEGRQWTRGEALRDPIFWLLTAGVLAPPFIGTAILFNQVYLTELRSWPLELFASAFPVMAGTAIATALVLGPLIDRYSARALLPAVLLPLFSGCLVLALLPAAPTAFVFMGLLGISSGFTAAMSGALWPELYGSRHIGAIRSVAFALMVFSSAAGPGLVGVLIDAGVDFDRQLLVMSGYCALMIGGLTIASRKLRDRQNGPLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYZ4</accession>
    <name>A0A0M6ZYZ4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01555</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67879.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671349.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01555"/>
    <dbReference type="EnsemblBacteria" id="CTQ67879">
        <property type="protein sequence ID" value="CTQ67879"/>
        <property type="gene ID" value="LAX5112_01555"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021354">
        <property type="entry name" value="DUF2975"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11188">
        <property type="entry name" value="DUF2975"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="22"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="77"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="118"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="163"/>
            <end position="180"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67879.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="193" mass="21597" checksum="CFE0C02202C16923" modified="2015-12-09" version="1">MVDTSISEQSKRLKRIRIVARLVKRIATLSLFITLTVGIGLTFVFLFPEGPAWNIDETNWIGEGERALAAIPFEQRFILAVLLVVNFVLALGIIWALRSVCRHFETGDYFSPQALENVFSLGAWMISFAVFDIASDPVGIMVATLDYPEVERVIDVSLDGGEIFTMILGALMLLFGWIFREAALLAEENRQIV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZC7</accession>
    <name>A0A0M6ZZC7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">SLT domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_01438</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the virb1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67576.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01438"/>
    <dbReference type="EnsemblBacteria" id="CTQ67576">
        <property type="protein sequence ID" value="CTQ67576"/>
        <property type="gene ID" value="LAX5112_01438"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023346">
        <property type="entry name" value="Lysozyme-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008258">
        <property type="entry name" value="Transglycosylase_SLT_dom_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01464">
        <property type="entry name" value="SLT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53955">
        <property type="entry name" value="SSF53955"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SLT" evidence="3">
        <location>
            <begin position="18"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="319"/>
            <end position="369"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="341"/>
            <end position="355"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009387"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ67576.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="469" mass="50176" checksum="CF662297484661B1" modified="2015-12-09" version="1">MRVADTTSVASRIELAFQSASTSTGTSFDYLVKTAARESSFNPSAKAKTSSATGLFQFIESTWLETMKQAGPKHGLDKYADHIQRSKSGKYYVNDPQMRREILDLRKDPEISSVMAGALTQKNAQYLERRIGREPTDGELYMAHFLGANGASRLIEKTAANPDMRADQVFSAQARANKPIFYHRNGQARSMEEVYQVIVSKHDAVNMIAEAGGRKNLRTSGELLNVAALPNAKPGSGAPVTAPVPFDDLAGDPAAAFAMRSKPQPPSMMAEAKPKDFDHLAGDPAAQFAMRSKPDAPVQMAAATVPVQPELPLDLPETVAKAPVPDGRPQTVAVANPDASDPAQPQVQAQQVASAQRPDPDDPRDASINQAPDQTASRVLSAFQAAQTANPFEALFRNDPGSDQAGVNPRFASAFAAVEEAALYSAVSGASTQVAAQELALVNQGGPLDLTRFLRLKAQEEQKDLLPPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZH3</accession>
    <name>A0A0M6ZZH3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01396</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67450.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671197.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67450">
        <property type="protein sequence ID" value="CTQ67450"/>
        <property type="gene ID" value="LAX5112_01396"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67450.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="91" mass="10156" checksum="104730DE56F60935" modified="2015-12-09" version="1">MSNKLEPGYMVFEVFALEVYRKDPELFSTALELARQNGLKALKQCKRQDQASLKAQLQAVDSLHGLAGLMTLLAKDKPEDLPDLGPDNIRI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZL6</accession>
    <name>A0A0M6ZZL6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">2-acyl-glycerophospho-ethanolamine acyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01659</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68165.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01659"/>
    <dbReference type="EnsemblBacteria" id="CTQ68165">
        <property type="protein sequence ID" value="CTQ68165"/>
        <property type="gene ID" value="LAX5112_01659"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016746">
        <property type="term" value="F:acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002123">
        <property type="entry name" value="Plipid/glycerol_acylTrfase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01553">
        <property type="entry name" value="Acyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00563">
        <property type="entry name" value="PlsC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="domain" description="PlsC" evidence="2">
        <location>
            <begin position="34"/>
            <end position="155"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00563"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ68165.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="209" mass="23578" checksum="A1E2E63A353451E7" modified="2015-12-09" version="1">MLQKVFYIFVKIAVLFLLGLNVRRKDLLPFEGPAIIVANHNSHLDTMVLMALMPLSKLKDIKPVAAADYFFSSPWKAWFSEHVLGIIPVERKREDRTSDPLEGCYQALHKGQVLILFPEGSRGEPEEMTGLKKGISYLAEHTPSAPVVPVFTHGLGKALPKGSFLLVPFFCDIFVGKPITWTGDRTQFMNTLQDRFNELSSEKTFAPWE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZW1</accession>
    <name>A0A0M6ZZW1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01507</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67756.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67756">
        <property type="protein sequence ID" value="CTQ67756"/>
        <property type="gene ID" value="LAX5112_01507"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019285">
        <property type="entry name" value="DUF2336"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10098">
        <property type="entry name" value="DUF2336"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="340"/>
            <end position="383"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="342"/>
            <end position="365"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67756.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="383" mass="41669" checksum="14CF491950AF6608" modified="2015-12-09" version="1">MQTINSTIRKPSSQPSDSGILHSAVELFTGRTGHSTEEKRVFLELARNLLPATSVRDRRQIANMLVTYPEAPDALIDLLAQDKDDLTAFPILRHSTNVSVDLLVEIVKVGSEAARKALAGRPHLQRPILAALCETADAQTIKLLIDREDLILDQHLNERLSKRTDLIAELGEELSKHQALNTENLISQFLVLPASLRAKAIAAAETMSVIRSAQAPAHPSIPAIDTARLRLHGALLKAALLQKRNRFTDSLGQGLSLPSSVSDSLLQKGQGEALVIALKSLGLDRPRTTTILVRLLGEHLAVEEIRKLLFLHRNLSTGAANVLTGSWTLFGTSANTAEFDGTGEKTPRHVGQFEDASRPSRDARSHRISSGTTSAQRVRRGIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZY0</accession>
    <name>A0A0M6ZZY0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Gp138_N domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01214</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67104.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671053.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01214"/>
    <dbReference type="EnsemblBacteria" id="CTQ67104">
        <property type="protein sequence ID" value="CTQ67104"/>
        <property type="gene ID" value="LAX5112_01214"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.230">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041599">
        <property type="entry name" value="Gp138_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037026">
        <property type="entry name" value="Vgr_OB-fold_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18352">
        <property type="entry name" value="Gp138_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Gp138_N" evidence="2">
        <location>
            <begin position="33"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="99"/>
            <end position="118"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF18352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ67104.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="221" mass="24704" checksum="09811EFFD7A426DE" modified="2015-12-09" version="1">MSIGYRGKTTNADREVTAAQAQEQSEADWGELTGTVESFDPETQTISVKPDYLPIHDGQEVEMPVLQEVPVRFQRMGGFVVTTPVKKGDRVALRPQMRSSEEFHTEGSYNAPKDKRSKSLSDMEAFLDGGEPLTNPIKNFNTDNMEIRSEDGRFAIEMSEDGKYRMRGAEGNWFDLLAQLAELLASDKLNVKIGSSKGMIHELEHRDQYADIAGKLRGMAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A025</accession>
    <name>A0A0M7A025_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Antibiotic biosynthesis monooxygenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01534</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67826.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01534"/>
    <dbReference type="EnsemblBacteria" id="CTQ67826">
        <property type="protein sequence ID" value="CTQ67826"/>
        <property type="gene ID" value="LAX5112_01534"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004497">
        <property type="term" value="F:monooxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007138">
        <property type="entry name" value="ABM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03992">
        <property type="entry name" value="ABM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51725">
        <property type="entry name" value="ABM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0503">Monooxygenase</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABM" evidence="1">
        <location>
            <begin position="4"/>
            <end position="94"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51725"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67826.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="107" mass="12166" checksum="ED8505FF7B515FA4" modified="2015-12-09" version="1">MSHYFISASIEMTEGSKLEQVESELQKLVAQTREEPGCILFKIRQNLKEPTKFTFWECWTNPDALAAHFEADHTKAYLAQNLTEVRHIEALGEIGDKTFADAIKAHA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A063</accession>
    <name>A0A0M7A063_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 5">50S ribosomal protein L14</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3 6" type="primary">rplN</name>
        <name evidence="6" type="ORF">LAX5112_01736</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3 5">Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">Part of the 50S ribosomal subunit. Forms a cluster with proteins L3 and L19. In the 70S ribosome, L14 and L19 interact and together make contacts with the 16S rRNA in bridges B5 and B8.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 4">Belongs to the universal ribosomal protein uL14 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68428.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008191626.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01736"/>
    <dbReference type="EnsemblBacteria" id="CTQ68428">
        <property type="protein sequence ID" value="CTQ68428"/>
        <property type="gene ID" value="LAX5112_01736"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015934">
        <property type="term" value="C:large ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.150.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01367">
        <property type="entry name" value="Ribosomal_L14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036853">
        <property type="entry name" value="Ribosomal_L14_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000218">
        <property type="entry name" value="Ribosomal_L14P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005745">
        <property type="entry name" value="Ribosomal_L14P_bac-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019972">
        <property type="entry name" value="Ribosomal_L14P_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11761">
        <property type="entry name" value="PTHR11761"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00238">
        <property type="entry name" value="Ribosomal_L14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01374">
        <property type="entry name" value="Ribosomal_L14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50193">
        <property type="entry name" value="SSF50193"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01067">
        <property type="entry name" value="rplN_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00049">
        <property type="entry name" value="RIBOSOMAL_L14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="1 3 4" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="3 5" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="3 5" id="KW-0699">rRNA-binding</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01367"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU003950"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ68428.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="122" mass="13458" checksum="CD36414BD9966CFD" modified="2015-12-09" version="1">MIQMQTNLDVADNSGARRVMCIKVLGGSKRKYAQVGDIIVVSVKEAIPRGRVKKGDVMKAVVVRTAKDIRRPDGSVIRFDRNAAVLVNNNKEPVGTRIFGPVPRELRAKNHMKIISLAPEVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0N8</accession>
    <name>A0A0M7A0N8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01660</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68167.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ68167">
        <property type="protein sequence ID" value="CTQ68167"/>
        <property type="gene ID" value="LAX5112_01660"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="142"/>
            <end position="160"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68167.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="163" mass="17780" checksum="217360A4F00F4570" modified="2015-12-09" version="1">MFFIVPDVLLTCLAMKSLKAALMAALFAALGATAGGTLVWHLAYAEPEATMHLLLVVPGISEATFETVRRLLSEGIYIGMLQGAFTGVPYKIFAAEAGNTGINPLLFASLTPLVRLPRFVALSLVAWAASRCIGERLSGRQKLFTSLSLWLSFYVIYFRYVGW</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A189</accession>
    <name>A0A0M7A189_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Trans-2,3-dihydro-3-hydroxyanthranilate isomerase</fullName>
            <ecNumber evidence="3">5.3.3.17</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">phzF</name>
        <name evidence="3" type="ORF">LAX5112_01607</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the PhzF family.</text>
    </comment>
    <dbReference type="EC" id="5.3.3.17" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68020.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671386.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01607"/>
    <dbReference type="EnsemblBacteria" id="CTQ68020">
        <property type="protein sequence ID" value="CTQ68020"/>
        <property type="gene ID" value="LAX5112_01607"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102943">
        <property type="term" value="F:trans-2,3-dihydro-3-hydroxy-anthranilate isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009058">
        <property type="term" value="P:biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003719">
        <property type="entry name" value="Phenazine_PhzF"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13774">
        <property type="entry name" value="PTHR13774"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02567">
        <property type="entry name" value="PhzC-PhzF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF016184">
        <property type="entry name" value="PhzC_PhzF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00654">
        <property type="entry name" value="PhzF_family"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0413">Isomerase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" evidence="2">
        <location>
            <position position="46"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008270"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR016184-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ68020.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="303" mass="32869" checksum="683ECECCA56B49F7" modified="2015-12-09" version="1">MSRRYAILDVFTNKALAGNPLAVVLDSEDLSDEQMQKIAGEFNLSETVFVFPPENPGHSASMRIFTPKCELPFAGHPTVGTAILIAVERFGDVTGEQDAVVVLKQEIGTVRCAVILRENATAFAEFDVPVLPEPAGPTQNIELIAAALNLEPSDIGFENHAPSRFKVGPAFHFIPVRDLNALAQAKPVPAMWKKGFGNDEHNDAYVYCRETRSHDSAFHARLFAPDMGIIEDPATGSAAAAFAGVIRHYDGLTAGTHHIRIEQGFEMGRPSLIDLEIDVENGDMHAVRIGGQATLIARGELFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A218</accession>
    <name>A0A0M7A218_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Carboxylate/amino acid/amine transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01920</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68879.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671612.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01920"/>
    <dbReference type="EnsemblBacteria" id="CTQ68879">
        <property type="protein sequence ID" value="CTQ68879"/>
        <property type="gene ID" value="LAX5112_01920"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000620">
        <property type="entry name" value="EamA_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00892">
        <property type="entry name" value="EamA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="45"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="76"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="104"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="132"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="156"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="186"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="214"/>
            <end position="231"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="268"/>
            <end position="286"/>
        </location>
    </feature>
    <feature type="domain" description="EamA" evidence="2">
        <location>
            <begin position="14"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="domain" description="EamA" evidence="2">
        <location>
            <begin position="156"/>
            <end position="285"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ68879.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="293" mass="31851" checksum="37C72401BA41AAC7" modified="2015-12-09" version="1">MSSAAYKPRFNARAGIILICAGVICLCISDAIAKALSANYPVLQILFIRNLIALPIVVAMIWKLAGPSALKSHKPIAHLVRGGVWVLAAMTFFTSFRFLGLAEATTLVFIAPIFITAISALFLNEQVGWRRWSAVMVGFIGVLVVVRPGAGAFQLALLLPLATAFLYAVLMLSARLVDERESVWTLMLYLVGSGGLITALTMPFLWVPPRAEDALLFLGIAAFGTAGVTMLTQAFRVAPASTIAPFEYTSLLWATLLGWMFWREIPDTWTYVGAAIIIASGIFIVLRENRSQL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A251</accession>
    <name>A0A0M7A251_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">MFS transporter, aromatic acid:H+ symporter (AAHS) family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_01545</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67854.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671342.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01545"/>
    <dbReference type="EnsemblBacteria" id="CTQ67854">
        <property type="protein sequence ID" value="CTQ67854"/>
        <property type="gene ID" value="LAX5112_01545"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010645">
        <property type="entry name" value="MFS_4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06779">
        <property type="entry name" value="MFS_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="46"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="77"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="101"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="137"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="168"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="219"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="253"/>
            <end position="274"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="281"/>
            <end position="298"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="304"/>
            <end position="325"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="337"/>
            <end position="361"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="373"/>
            <end position="390"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="6">
        <location>
            <begin position="7"/>
            <end position="391"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ67854.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="391" mass="39701" checksum="392FAE26641B41A6" modified="2015-12-09" version="1">MKQSLWSSICLALGGLLALAAAMGIGRFVYTPILPSMTEGIPLTPSAAGLIASANFLGYLTGALIGASRFLGGTPRTWFLAGLALSALTSAAMALTSDVWFFMMIRFISGLASAFVLVFSTTLVLERLTTAGHSALSAVHFSGVGIGIALSAVLIAALNHNTADWQTLWLASGLATAILLAGATVLVPARSSASLAAPTDGGRSPEDGRRTWSPTVIRLVAAYGLFGFGYVITATFVSVMARTTPSLTEIEPFVWLIVGLSAAPSIYVWNLIAAKLGARRAFALACLVEAGGVAMTAVSTSPAIFLIGAALLGGTFMGITALGLAEGRRLTAEAGTSAVRQMLATLTASFGLGQAAGPWIAGQLHGVTGSFQAPSIAAAIALVIAAALAGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A286</accession>
    <name>A0A0M7A286_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Magnesium transporter MgtE</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">LAX5112_01796</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Acts as a magnesium transporter.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cell membrane</location>
            <topology evidence="7">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the SLC41A transporter family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68582.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671664.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01796"/>
    <dbReference type="EnsemblBacteria" id="CTQ68582">
        <property type="protein sequence ID" value="CTQ68582"/>
        <property type="gene ID" value="LAX5112_01796"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015095">
        <property type="term" value="F:magnesium ion transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.357.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.60.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.580.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000644">
        <property type="entry name" value="CBS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046342">
        <property type="entry name" value="CBS_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006668">
        <property type="entry name" value="Mg_transptr_MgtE_intracell_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038076">
        <property type="entry name" value="MgtE_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006669">
        <property type="entry name" value="MgtE_transporter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006667">
        <property type="entry name" value="SLC41_membr_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036739">
        <property type="entry name" value="SLC41_membr_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43773">
        <property type="entry name" value="PTHR43773"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00571">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01769">
        <property type="entry name" value="MgtE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03448">
        <property type="entry name" value="MgtE_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00116">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00924">
        <property type="entry name" value="MgtE_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161093">
        <property type="entry name" value="SSF161093"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54631">
        <property type="entry name" value="SSF54631"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00400">
        <property type="entry name" value="mgtE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51371">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0129">CBS domain</keyword>
    <keyword evidence="7" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7" id="KW-0460">Magnesium</keyword>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="7" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="305"/>
            <end position="325"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="331"/>
            <end position="358"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="379"/>
            <end position="401"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="407"/>
            <end position="432"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="444"/>
            <end position="469"/>
        </location>
    </feature>
    <feature type="domain" description="CBS" evidence="8">
        <location>
            <begin position="224"/>
            <end position="280"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009749"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00703"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU362011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51371"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ68582.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="471" mass="51269" checksum="04014651B3A75081" modified="2015-12-09" version="1">MSNAAELDMSPSPELQIPVRDEDERLNPDFIAAVETAIAAEDKSGLSAIAADLHEADTGDLLEALSPDDRAAFIRLLGEDFDYTALTETDEAVRLQLLEDLPNDVIAEGLGDLDSDDAVYILEDLDEDDQAAILEELPYADRAQLKKALDYPEDSAGRRMQSEFIAVAPFWTVGQTIDYMREARDLPDDFYEIYVVDPSFKLLGSVHLDKILRTKRREKVTSIMAERLDAVQATEDQEEVARRFERYNLVSSAVVDENDRLVGVLTVDDIVDVIQEEAEEDLRALAGVGDEEISDNVMTIARSRLTWLVVNLGTAVLASVVIALFEETIEAMVALAVLMPIVASMGGNAGTQTMTVAVRGIATQELSARNLMRVLNREVLVSCLNGLALAVLIGVTAWLWFSSVGLGVVIGSAIVINMLFAGLSGLLIPIALDRLNIDPAIASSVFVTTVTDVVGFFAFLGIAALWFGLPF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2Q1</accession>
    <name>A0A0M7A2Q1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="11">D-alanyl-D-alanine carboxypeptidase DacA</fullName>
            <ecNumber evidence="11">3.4.16.4</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">dacA_1</name>
        <name evidence="11" type="ORF">LAX5112_01601</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 8">Belongs to the peptidase S11 family.</text>
    </comment>
    <dbReference type="EC" id="3.4.16.4" evidence="11"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68003.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671381.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01601"/>
    <dbReference type="EnsemblBacteria" id="CTQ68003">
        <property type="protein sequence ID" value="CTQ68003"/>
        <property type="gene ID" value="LAX5112_01601"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009002">
        <property type="term" value="F:serine-type D-Ala-D-Ala carboxypeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008360">
        <property type="term" value="P:regulation of cell shape"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.710.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012338">
        <property type="entry name" value="Beta-lactam/transpept-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018044">
        <property type="entry name" value="Peptidase_S11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001967">
        <property type="entry name" value="Peptidase_S11_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00768">
        <property type="entry name" value="Peptidase_S11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00725">
        <property type="entry name" value="DADACBPTASE1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56601">
        <property type="entry name" value="SSF56601"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11" id="KW-0121">Carboxypeptidase</keyword>
    <keyword evidence="3" id="KW-0133">Cell shape</keyword>
    <keyword evidence="5" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="11" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0573">Peptidoglycan synthesis</keyword>
    <keyword evidence="11" id="KW-0645">Protease</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 9" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="9">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809243" evidence="9">
        <location>
            <begin position="28"/>
            <end position="299"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_S11" evidence="10">
        <location>
            <begin position="59"/>
            <end position="279"/>
        </location>
    </feature>
    <feature type="active site" description="Acyl-ester intermediate" evidence="6">
        <location>
            <position position="87"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="6">
        <location>
            <position position="90"/>
        </location>
    </feature>
    <feature type="active site" evidence="6">
        <location>
            <position position="147"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="249"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007164"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR618044-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR618044-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU004016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF00768"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ68003.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="299" mass="31259" checksum="B62981392AB8AFE8" modified="2015-12-09" version="1">MSFSRFLRSLSAVVLAVSLAACQTAGAPSQSGASSGQAAAVQTASLPVVSYAPATAQERGFSALVLNAATGQELYAVNADAPRFPASLTKMMTLYMLFESVSSGENRLSSPLNISANAASQPPAKIGLKAGSTISVEQAARALAVKSANDVGVAVAENLAGSEAAFAREMTQKARALGLSRTRFVNATGLPDPAQVTTARDMAKLGLALKRRFPQYASYYRAKSFTYNGRKFRATNNLLGKVQGVDGLKTGYVRMSGYNLVATVRRGGKQLIVVVIGGQSEAARDAEVTRLIEAHFQAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2X4</accession>
    <name>A0A0M7A2X4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">3-ketosteroid-9-alpha-hydroxylase reductase subunit</fullName>
            <ecNumber evidence="7">1.17.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">hmp</name>
        <name evidence="7" type="ORF">LAX5112_01935</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.17.1.-" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68921.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01935"/>
    <dbReference type="EnsemblBacteria" id="CTQ68921">
        <property type="protein sequence ID" value="CTQ68921"/>
        <property type="gene ID" value="LAX5112_01935"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051537">
        <property type="term" value="F:2 iron, 2 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00207">
        <property type="entry name" value="fer2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036010">
        <property type="entry name" value="2Fe-2S_ferredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001041">
        <property type="entry name" value="2Fe-2S_ferredoxin-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006058">
        <property type="entry name" value="2Fe2S_fd_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012675">
        <property type="entry name" value="Beta-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008333">
        <property type="entry name" value="Cbr1-like_FAD-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017927">
        <property type="entry name" value="FAD-bd_FR_type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039261">
        <property type="entry name" value="FNR_nucleotide-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001433">
        <property type="entry name" value="OxRdtase_FAD/NAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017938">
        <property type="entry name" value="Riboflavin_synthase-like_b-brl"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00970">
        <property type="entry name" value="FAD_binding_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00111">
        <property type="entry name" value="Fer2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00175">
        <property type="entry name" value="NAD_binding_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52343">
        <property type="entry name" value="SSF52343"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54292">
        <property type="entry name" value="SSF54292"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63380">
        <property type="entry name" value="SSF63380"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00197">
        <property type="entry name" value="2FE2S_FER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51085">
        <property type="entry name" value="2FE2S_FER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51384">
        <property type="entry name" value="FAD_FR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0001">2Fe-2S</keyword>
    <keyword evidence="3" id="KW-0408">Iron</keyword>
    <keyword evidence="4" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FAD-binding FR-type" evidence="6">
        <location>
            <begin position="12"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="domain" description="2Fe-2S ferredoxin-type" evidence="5">
        <location>
            <begin position="275"/>
            <end position="359"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022714"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51384"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ68921.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="359" mass="39444" checksum="F905560669A378A4" modified="2015-12-09" version="1">MAMIPMPDKDTPVWTDAEMLECVNVLPEAPNVKTFTFRPPSGNRFVYKAGQFITLDLPVPGGNVQRTYTISSSPVTQAYLSVTVKAQEGSIGTRWMLGHLVPGMQIKAFGPAGLFHLPSNPDGKFLFISAGSGVTPMMSMAGTLFERGEEPDICFIQCANRPAELIFRKRLEYMACRTNGLQLHFVVNQSDPYEVWTGYRGYFNQLMLGLMCNDYLERDVYCCGPEGFMEGVREILNALGYDMDRYHQESFQAPAETKEELTEFDDVVPQEDTKAHIVFTGSNVSAWCSETDTVLAVAKEAGLNIPSGCTFGVCGTCKVKKVSGDVHMVHSGGISDEDVEDGFILACCSNPIGTVEVEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3S3</accession>
    <name>A0A0M7A3S3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Xaa-Pro dipeptidase</fullName>
            <ecNumber evidence="2">3.4.13.9</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">pepQ_2</name>
        <name evidence="2" type="ORF">LAX5112_01691</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.4.13.9" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68314.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01691"/>
    <dbReference type="EnsemblBacteria" id="CTQ68314">
        <property type="protein sequence ID" value="CTQ68314"/>
        <property type="gene ID" value="LAX5112_01691"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102009">
        <property type="term" value="F:proline dipeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036005">
        <property type="entry name" value="Creatinase/aminopeptidase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000994">
        <property type="entry name" value="Pept_M24"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00557">
        <property type="entry name" value="Peptidase_M24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55920">
        <property type="entry name" value="SSF55920"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0224">Dipeptidase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0645">Protease</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidase_M24" evidence="1">
        <location>
            <begin position="7"/>
            <end position="160"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00557"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68314.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="178" mass="19554" checksum="AB9D208AFC08C800" modified="2015-12-09" version="1">MIHNLQILQSGSETSMVHRRANVRAYQTYDPVYFCFCNMAQFKQYKLGFDRMFHIGDITDQARDVQEAAIAAQQAAIAAIRPGVLAEDVAAAANEVYRERGYQTGYRTGRSIGVAYLEAPELKDGDKTVLQPGMTFAVDGGISVDGVTAGRIGDSIVVSETGSDYITDYPRQILLSHH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3Z0</accession>
    <name>A0A0M7A3Z0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Fumarate hydratase class I</fullName>
            <ecNumber evidence="10">4.2.1.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="primary">fumA</name>
        <name evidence="14" type="ORF">LAX5112_01980</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Catalyzes the reversible hydration of fumarate to (S)-malate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 10">
            <text>(S)-malate = fumarate + H2O</text>
            <dbReference type="Rhea" id="RHEA:12460"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15589"/>
            <dbReference type="ChEBI" id="CHEBI:29806"/>
            <dbReference type="EC" id="4.2.1.2"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 10">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="4 10">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 10">Belongs to the class-I fumarase family.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.2" evidence="10"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ69030.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671652.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01980"/>
    <dbReference type="EnsemblBacteria" id="CTQ69030">
        <property type="protein sequence ID" value="CTQ69030"/>
        <property type="gene ID" value="LAX5112_01980"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004333">
        <property type="term" value="F:fumarate hydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006091">
        <property type="term" value="P:generation of precursor metabolites and energy"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.130.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004646">
        <property type="entry name" value="Fe-S_hydro-lyase_TtdA-typ_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004647">
        <property type="entry name" value="Fe-S_hydro-lyase_TtdB-typ_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036660">
        <property type="entry name" value="Fe-S_hydroAse_TtdB_cat_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011167">
        <property type="entry name" value="Fe_dep_fumarate_hydratase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020557">
        <property type="entry name" value="Fumarate_lyase_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05681">
        <property type="entry name" value="Fumerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05683">
        <property type="entry name" value="Fumerase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001394">
        <property type="entry name" value="Fe_dep_fumar_hy"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF117457">
        <property type="entry name" value="SSF117457"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00722">
        <property type="entry name" value="ttdA_fumA_fumB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00723">
        <property type="entry name" value="ttdB_fumA_fumB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00163">
        <property type="entry name" value="FUMARATE_LYASES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 10" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="7 10" id="KW-0408">Iron</keyword>
    <keyword evidence="8 10" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="9 10 14" id="KW-0456">Lyase</keyword>
    <keyword evidence="6 10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Fumerase" evidence="12">
        <location>
            <begin position="55"/>
            <end position="329"/>
        </location>
    </feature>
    <feature type="domain" description="Fumerase_C" evidence="13">
        <location>
            <begin position="336"/>
            <end position="541"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008876"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRNR" id="PIRNR001394"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF05681"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF05683"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="CTQ69030.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="545" mass="59620" checksum="E7066628CA3AEF6A" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A472</accession>
    <name>A0A0M7A472_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Multicopper oxidase mco</fullName>
            <ecNumber evidence="5">1.-.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">mco_2</name>
        <name evidence="5" type="ORF">LAX5112_02059</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.-.-.-" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69292.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671738.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02059"/>
    <dbReference type="EnsemblBacteria" id="CTQ69292">
        <property type="protein sequence ID" value="CTQ69292"/>
        <property type="gene ID" value="LAX5112_02059"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005507">
        <property type="term" value="F:copper ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.420">
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011706">
        <property type="entry name" value="Cu-oxidase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045087">
        <property type="entry name" value="Cu-oxidase_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011707">
        <property type="entry name" value="Cu-oxidase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033138">
        <property type="entry name" value="Cu_oxidase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002355">
        <property type="entry name" value="Cu_oxidase_Cu_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008972">
        <property type="entry name" value="Cupredoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006311">
        <property type="entry name" value="TAT_signal"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11709">
        <property type="entry name" value="PTHR11709"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07731">
        <property type="entry name" value="Cu-oxidase_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07732">
        <property type="entry name" value="Cu-oxidase_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49503">
        <property type="entry name" value="SSF49503"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00079">
        <property type="entry name" value="MULTICOPPER_OXIDASE1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00080">
        <property type="entry name" value="MULTICOPPER_OXIDASE2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2 5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Plastocyanin-like" evidence="4">
        <location>
            <begin position="51"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="domain" description="Plastocyanin-like" evidence="3">
        <location>
            <begin position="368"/>
            <end position="455"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF07731"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF07732"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ69292.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="461" mass="50069" checksum="D3097810E81E89F3" modified="2015-12-09" version="1">MLGLSRRELLLGSAATGAAFATGRLAARAANSPDHTLTISPYEHGLLPGTITRDMMSFAPDGPPPILRMRRGEKALIDVQNTLDEASVVHWHGLRIANAMDGVPYLTQHPIEAGQSFQYAFTPPDAGTFWYHPHCNTLEQMGRGLTGVLIVDEEEDPGFDLDIPLNIRDFRLGGDGQFIEMFKARNAARGGTYGTVSTVNWQIDPAYEVPAGGLVRLRLALTDVTRVGTFGVEGGVAQVIALDSNPLPGPMSANNILLSPGQRADVALRVPDEEGQDVTLFLRRPNGDKALARFKANGASANRQLADLKPLPANPVPKPDLRNAEVIDFVFGWSPEGDAPQASICGSLGYTFWSINREAWPGDVPGPLDPLARLKLGRSYILRLRNESPNAHPIHLHGVSFQLLRSNKRKLPPLVTDTALLLEEETIEVALVADNPGDWAFHCHVIEHQKTGLAGFLRIEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4G0</accession>
    <name>A0A0M7A4G0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Alpha-E domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01767</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68514.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671496.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01767"/>
    <dbReference type="EnsemblBacteria" id="CTQ68514">
        <property type="protein sequence ID" value="CTQ68514"/>
        <property type="gene ID" value="LAX5112_01767"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007296">
        <property type="entry name" value="DUF403"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04168">
        <property type="entry name" value="Alpha-E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Alpha-E" evidence="1">
        <location>
            <begin position="1"/>
            <end position="313"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04168"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68514.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="316" mass="36772" checksum="A88D1C9A1E0B4EE3" modified="2015-12-09" version="1">MLGRTAASLFWMSRYQERAQNITRLMEVAYRGAIMAYDGQAEGHHWQFALACSGAETGYHEKHDELHSRHVTNYMVFSKDNPISIRNCLELTRNNARAVRTGITAELWEAINTTWIEFCDTSPQSVTQEKLPDFLAWLAQRSHLFRGALLNTVLRDDGYYFSQMGTFVERADNTARILDNQYWVLLPDNDIIEDGSSERYQWSAILRALSGRRSYRFAYPNAQLKAFNIAEFLILRREMPRSLAYCYDWLADTAEDLGQFYGSREPSLDLAADIFKDLKEKQMRDIYQEGLHEFLIDFIGKNNQFAHQLCEDYNFA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4N0</accession>
    <name>A0A0M7A4N0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Regulator of autolytic activity</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">mgrA</name>
        <name evidence="3" type="ORF">LAX5112_01797</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68584.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01797"/>
    <dbReference type="EnsemblBacteria" id="CTQ68584">
        <property type="protein sequence ID" value="CTQ68584"/>
        <property type="gene ID" value="LAX5112_01797"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000835">
        <property type="entry name" value="HTH_MarR-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01047">
        <property type="entry name" value="MarR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00598">
        <property type="entry name" value="HTHMARR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00347">
        <property type="entry name" value="HTH_MARR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50995">
        <property type="entry name" value="HTH_MARR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH marR-type" evidence="2">
        <location>
            <begin position="108"/>
            <end position="238"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="18"/>
            <end position="34"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ68584.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="246" mass="27112" checksum="159EF12FF7CBB35F" modified="2015-12-09" version="1">MSTTTNQMSLLDAIGLNAPEDEKPKKDKKSAAPEKSSKPKKRKSKKTADEAAMALDAAAVEGTDPADATGEVPVNTSDASAENPIENGEKSDGIGTLEIRPDGPLPLDKYLCFSLYSANHAMHGVYKTLLKDVGLTYPQFLTMTVLWDKNNVPVGAITQKLQLDTNTLTPLLKRLEAMGLLTRTRSTKDERQVILKLTRKGRNLQKKTEHFAECIFSSTGLSLEEIVDLQTKIMRLRDNLRNTDLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6J5</accession>
    <name>A0A0M7A6J5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DNA-binding transcriptional activator YeiL</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02600</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70755.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672184.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70755">
        <property type="protein sequence ID" value="CTQ70755"/>
        <property type="gene ID" value="LAX5112_02600"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00038">
        <property type="entry name" value="CAP_ED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018490">
        <property type="entry name" value="cNMP-bd-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000595">
        <property type="entry name" value="cNMP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00027">
        <property type="entry name" value="cNMP_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00100">
        <property type="entry name" value="cNMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51206">
        <property type="entry name" value="SSF51206"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50042">
        <property type="entry name" value="CNMP_BINDING_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cyclic nucleotide-binding" evidence="1">
        <location>
            <begin position="34"/>
            <end position="119"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70755.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="199" mass="22370" checksum="93D063EE9AE15C71" modified="2015-12-09" version="1">MTQSPVTMFNAWLRKSGGLPAEAADAASDISVFRRFEADDLLFSAGERPDVLYFIQSGLVRFFYLTDDGKEFNKNFVAVGSVVTSLSTFLSGVPSPFFTQALEQTVTIALPMEFVRRQMETDIHWERLLSRSVAMLALKKEQREASFLLQDAGARYEAFLDDFSDLAPRLPQYHIASYLGITPVALSRIRARRGKQRAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7C8</accession>
    <name>A0A0M7A7C8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">YciI-like protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02149</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the YciI family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69534.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671803.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02149"/>
    <dbReference type="EnsemblBacteria" id="CTQ69534">
        <property type="protein sequence ID" value="CTQ69534"/>
        <property type="gene ID" value="LAX5112_02149"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005545">
        <property type="entry name" value="YCII"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03795">
        <property type="entry name" value="YCII"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="YCII" evidence="2">
        <location>
            <begin position="24"/>
            <end position="109"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007689"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF03795"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ69534.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="130" mass="14350" checksum="D1B2FD98878FB7E0" modified="2015-12-09" version="1">MSGPTVTKDDILKASAGMLQQQLYVVFTTPTNGLGPVMENIEEHLNFQVDLEQRGIMLGAGPFWADDEHTWNGEGMVIIRADSLDHARQIADTDPMHSSGARSFTVRPWLLNEGRITVEVNFSTGRHAVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7J4</accession>
    <name>A0A0M7A7J4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Serralysin B</fullName>
            <ecNumber evidence="7">3.4.24.40</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">prtB</name>
        <name evidence="7" type="ORF">LAX5112_02217</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.4.24.40" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69703.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671854.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02217"/>
    <dbReference type="EnsemblBacteria" id="CTQ69703">
        <property type="protein sequence ID" value="CTQ69703"/>
        <property type="gene ID" value="LAX5112_02217"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031012">
        <property type="term" value="C:extracellular matrix"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005615">
        <property type="term" value="C:extracellular space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004222">
        <property type="term" value="F:metalloendopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd04277">
        <property type="entry name" value="ZnMc_serralysin_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.150.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.390.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024079">
        <property type="entry name" value="MetalloPept_cat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001818">
        <property type="entry name" value="Pept_M10_metallopeptidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013858">
        <property type="entry name" value="Peptidase_M10B_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006026">
        <property type="entry name" value="Peptidase_Metallo"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034033">
        <property type="entry name" value="Serralysin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011049">
        <property type="entry name" value="Serralysin-like_metalloprot_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00413">
        <property type="entry name" value="Peptidase_M10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08548">
        <property type="entry name" value="Peptidase_M10_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00235">
        <property type="entry name" value="ZnMc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51120">
        <property type="entry name" value="SSF51120"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2" id="KW-0645">Protease</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0964">Secreted</keyword>
    <keyword evidence="5" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="ZnMc" evidence="6">
        <location>
            <begin position="45"/>
            <end position="221"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM00235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ69703.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="506" mass="54653" checksum="2CCAF1D8C226556A" modified="2015-12-09" version="1">MCGLCHSALCDGLEHAQDGTFAAAAASGPGGTTSLNYIIGQLNRGDYSWGGIAVVTYSFAKVLPSYAKGLDEYDGFNSFNSQQMDMARLALETWSDVADITFQESNSYFAPIRFANSDTLADYSAAHAYLPGFSSWAGDVWVNSDYAYNTAPEIGNYGYKVLVHEIGHAIGQPHPGDYNASGGKLSYQNNAAYAEDSAQYSIMSYWDESHTGADFGDAFAQTPMLHDILAIQAKYGVNMSTRTDDTVYGFNSNTESPIYDFSQNTAPVFSIWDAGGIDTIDFSGYFVDTVINLNEGGFSSAAGLTNNISIAYGAVIENAIGGAGDDVVIGNQWDNLVDAGAGSDVFVLNQSSSSADTYVFDNGETIVFSDHGTDRLTNVEIIFYADAELDVIAQTQVSILEYAASYEDVEEAFGTDEEALFDHFVEFGLTEGRTIDFSALDYIASHEDLIEVFGADAEAGARHYIEFGRAENREITFDSAAFLEANPELVPLQGQEINAAKMFIEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7T4</accession>
    <name>A0A0M7A7T4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Fatty acid cis/trans isomerase (CTI)</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02522</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70476.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70476">
        <property type="protein sequence ID" value="CTQ70476"/>
        <property type="gene ID" value="LAX5112_02522"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010706">
        <property type="entry name" value="Fatty_acid_cis-trans_isomerase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06934">
        <property type="entry name" value="CTI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0413">Isomerase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809504" evidence="1">
        <location>
            <begin position="37"/>
            <end position="788"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70476.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="788" mass="88574" checksum="49B858156728B200" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7T6</accession>
    <name>A0A0M7A7T6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Polysaccharide biosynthesis protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">LAX5112_02251</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69793.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02251"/>
    <dbReference type="EnsemblBacteria" id="CTQ69793">
        <property type="protein sequence ID" value="CTQ69793"/>
        <property type="gene ID" value="LAX5112_02251"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029303">
        <property type="entry name" value="Polysacc_synt_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002797">
        <property type="entry name" value="Polysacc_synth"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01943">
        <property type="entry name" value="Polysacc_synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14667">
        <property type="entry name" value="Polysacc_synt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="56"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="82"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="134"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="160"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="191"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="221"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="262"/>
            <end position="291"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="297"/>
            <end position="317"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="347"/>
            <end position="367"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="411"/>
            <end position="431"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="437"/>
            <end position="456"/>
        </location>
    </feature>
    <feature type="domain" description="Polysacc_synt_C" evidence="7">
        <location>
            <begin position="381"/>
            <end position="465"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF14667"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ69793.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="478" mass="51240" checksum="94D4FD72302A537E" modified="2015-12-09" version="1">MQKEFFVQSPDNSTPKTGQDASLAAQVKQLATRAFGLLGAGGTDNQSAQRMAIATFGIRVGGAALAYLSQVVLARMLGAYDYGVFAVAWTFVIILGVMACGGFSSSASKFIPKYREAGDPDSLRGFISTSRRSVFLIGSTIAGAGIGVIALLHPVIDPSYVVPLSVALLALPFFSYAMAQDGIARSYDWPFLAMLPTYIWRPAALLIIILIFLVLAGEATATTAAMAAVLSAFLVAAYQHIHLNRRLRPVLPKGPKTTDIRLWILISLPMLVVDGFLQLITSADVIMVSFFEEPDQVAIYFAASKTLALVHFVYFAVRAASAHRFSRYLHSDDMTGLAAYVRQAVHWTFWPSVGAGIGLLIIAPWLLELFGSGFADGYLLIAVLMVGVLARASIGPADALLTMTGLQKTCAVIYGTTFVLNVVLNLIFISWLGLMGAAVATSCAILFETTALAFAAKRKLNITTFILPLMFQARNAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7V4</accession>
    <name>A0A0M7A7V4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">GcrA cell cycle regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02542</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70532.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008192977.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02542"/>
    <dbReference type="EnsemblBacteria" id="CTQ70532">
        <property type="protein sequence ID" value="CTQ70532"/>
        <property type="gene ID" value="LAX5112_02542"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011681">
        <property type="entry name" value="GcrA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07750">
        <property type="entry name" value="GcrA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="42"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="47"/>
            <end position="88"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70532.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="181" mass="19386" checksum="B330B30CE6456582" modified="2015-12-09" version="1">MSWTNERVELLKKLWGDGLSASQIAGELGGVTRNAVIGKVHRLGLSGRAKSSSSSAKPRRPRTTASPASQSAPKRPQTQPQTQGSAALKMEPTPAPVAEVQPVAEPIADVVPMSKRATILTLTERTCKWPIGDPATDDFYFCGQVSEAGVPYCPYHCKIAYQPVADRRRSANNKTSVAQAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8J2</accession>
    <name>A0A0M7A8J2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Lipoprotein-releasing system ATP-binding protein LolD</fullName>
            <ecNumber evidence="6">3.6.3.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">lolD_1</name>
        <name evidence="6" type="ORF">LAX5112_02299</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.-" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ69954.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671935.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02299"/>
    <dbReference type="EnsemblBacteria" id="CTQ69954">
        <property type="protein sequence ID" value="CTQ69954"/>
        <property type="gene ID" value="LAX5112_02299"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd03255">
        <property type="entry name" value="ABC_MJ0796_LolCDE_FtsE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017911">
        <property type="entry name" value="MacB_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="14"/>
            <end position="237"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="49"/>
            <end position="56"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ69954.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="237" mass="25710" checksum="9FE8E3DBEA4960BE" modified="2015-12-09" version="1">MSIAPIHGTPAPLLETRGLTRILPAIVPVTLVEDISFSIGTSEFVAITGPSGSGKSSLLYLLGLLDRPTEGEVLIGGRKTHDLSKSETAHLRLEKIGFVFQFHFLLPEFTALENVMIPMQKLGALAATEQKDRAAGLLEDLGLEDFLHRQPAQLSGGQRQRVAVARALANAPDLILADEPTGSLDSVATEQVFTALQSIVDQQKTTVIAVTHDMDIAGRMQRRIHLVDGKIDYDRDQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8L7</accession>
    <name>A0A0M7A8L7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02667</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70961.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70961">
        <property type="protein sequence ID" value="CTQ70961"/>
        <property type="gene ID" value="LAX5112_02667"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="47"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="78"/>
            <end position="95"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70961.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="213" mass="21444" checksum="243C7A71AB563F15" modified="2015-12-09" version="1">MFDALKSLMGRDKPASKPADPATEANAAVPGLSRDANGHLKPAAQKDTQAMTASKNGNGDKSENGAPGGADPAKGGDSGGQNNPQPAPAASTAPVTSALNQQVVQAAEFSNYENAEYAPTMVSTAPELMVGQTTGLAVQDAANYMNAIMQIAVAAQAVAIKKAAENPPLAGEEIPLLTDIQQMVTQAVGVYGSVSTAAGTSSKTVISDFKTGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8Z5</accession>
    <name>A0A0M7A8Z5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Dihydroxy-acid dehydratase</fullName>
            <ecNumber evidence="3">4.2.1.9</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ilvD</name>
        <name evidence="3" type="ORF">LAX5112_02887</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the IlvD/Edd family.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.9" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71625.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451342.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02887"/>
    <dbReference type="EnsemblBacteria" id="CTQ71625">
        <property type="protein sequence ID" value="CTQ71625"/>
        <property type="gene ID" value="LAX5112_02887"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004160">
        <property type="term" value="F:dihydroxy-acid dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019752">
        <property type="term" value="P:carboxylic acid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044238">
        <property type="term" value="P:primary metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.30.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042096">
        <property type="entry name" value="Dihydro-acid_dehy_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000581">
        <property type="entry name" value="DiOHA_6PGluconate_deHydtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020558">
        <property type="entry name" value="DiOHA_6PGluconate_deHydtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037237">
        <property type="entry name" value="IlvD/EDD_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00920">
        <property type="entry name" value="ILVD_EDD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF143975">
        <property type="entry name" value="SSF143975"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00887">
        <property type="entry name" value="ILVD_EDD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3" id="KW-0456">Lyase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006486"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ71625.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="617" mass="66264" checksum="E39517875C53BE13" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A941</accession>
    <name>A0A0M7A941_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">D-malate degradation protein R</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">dmlR_6</name>
        <name evidence="3" type="ORF">LAX5112_02805</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71389.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02805"/>
    <dbReference type="EnsemblBacteria" id="CTQ71389">
        <property type="protein sequence ID" value="CTQ71389"/>
        <property type="gene ID" value="LAX5112_02805"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="7"/>
            <end position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ71389.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="305" mass="34036" checksum="19CD4329636BE351" modified="2015-12-09" version="1">MPESDTIDIRTLTIYVRACEEQNLTRCAEAMDLPKTTVSKAITRLESRLGLKLLERSTRKVQITEEGQVVLERARMLLTDFRSLTEDALSMATEPRGLLRVAAPPILGDYFSSHVAPAFLQKWPRVSIALSPSYSFDDLFSQSIDLAFRVGQVADDRLIARKFGQSTRIIAASPDFLSKEAAIEQPKDLSRVNCLRFTYNSQDSDWTLTDGRNTTSVPVRGNYFCPNIHALKHAAASGLGVAQLPIHAVEAEIAAGTLEHVMPAWHVPPLPIYLVYKSGSSRPRRLQALLDHLIENKALFDFLPY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A972</accession>
    <name>A0A0M7A972_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Purine catabolism protein PucB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">pucB</name>
        <name evidence="2" type="ORF">LAX5112_02898</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71658.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672408.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02898"/>
    <dbReference type="EnsemblBacteria" id="CTQ71658">
        <property type="protein sequence ID" value="CTQ71658"/>
        <property type="gene ID" value="LAX5112_02898"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.980.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012184">
        <property type="entry name" value="Bifunc_Mopterin-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036425">
        <property type="entry name" value="MoaB/Mog-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001453">
        <property type="entry name" value="MoaB/Mog_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025877">
        <property type="entry name" value="MobA-like_NTP_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12804">
        <property type="entry name" value="NTP_transf_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF036626">
        <property type="entry name" value="MPTBd_MobAlike"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00852">
        <property type="entry name" value="MoCF_biosynth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53218">
        <property type="entry name" value="SSF53218"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MoCF_biosynth" evidence="1">
        <location>
            <begin position="168"/>
            <end position="301"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00852"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71658.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="539" mass="56648" checksum="23ACAF9845ABA48F" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AA90</accession>
    <name>A0A0M7AA90_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">SAM dependent carboxyl methyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02735</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71150.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672284.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ71150">
        <property type="protein sequence ID" value="CTQ71150"/>
        <property type="gene ID" value="LAX5112_02735"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1200.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005299">
        <property type="entry name" value="MeTrfase_7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042086">
        <property type="entry name" value="MeTrfase_capping"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31009">
        <property type="entry name" value="PTHR31009"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03492">
        <property type="entry name" value="Methyltransf_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71150.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="374" mass="40832" checksum="639C166579BFFB15" modified="2015-12-09" version="1">MSAQKTPAPASPVTHATTTGMTGGGFYNQNSTPQWDATAAVLEHLEAAADALPIDGNGPVCLADFGCSEGRNSIAALSRPVTRLVRRTDRPIQTIHSDLPTNDFSSLLRSLRPEGHSVFGHPNVYSSVVGGSMYDQLLPDRSLHMATTFNAIGFLSRKPIATLPGYIFPNGPSVVRNNGFVTEEDQAAFSELARQDIATFLRARAKELVPGGKLLLQVFGANETASTCDGIYDLLNDAILCFVEDGSISKDVYEAYYQPVYMRTLEELTGPVNDPDLGVAGLFELDHSTSYEIPVSFNQRFAADGNLEAYARDYVNFFRAFTEAVLRNSLPATDERDRLVERIYDKAIALLKVSPDLYPFRYIAVAALMTRTGN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AA98</accession>
    <name>A0A0M7AA98_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Copper export regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">cueR</name>
        <name evidence="3" type="ORF">LAX5112_03012</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72028.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008192637.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03012"/>
    <dbReference type="EnsemblBacteria" id="CTQ72028">
        <property type="protein sequence ID" value="CTQ72028"/>
        <property type="gene ID" value="LAX5112_03012"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009061">
        <property type="entry name" value="DNA-bd_dom_put_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000551">
        <property type="entry name" value="MerR-type_HTH_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13411">
        <property type="entry name" value="MerR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00422">
        <property type="entry name" value="HTH_MERR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46955">
        <property type="entry name" value="SSF46955"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50937">
        <property type="entry name" value="HTH_MERR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH merR-type" evidence="2">
        <location>
            <begin position="29"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="104"/>
            <end position="152"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50937"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ72028.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="154" mass="17543" checksum="0AF0304066A1DF18" modified="2015-12-09" version="1">MSEALSILNNNDELVDVVAASDDGSKKTQFTIGDLAKEFGCTLRTLRFYEDKGLINPKRDGMNRVYNRRDRARLKLVLMGKQVGFSLSEIRDMLDLYDLRDGQVTQLRVALSRFNEQIAVLENQRKDIETAIEELSRTVEIVSGMLKQKEAEEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAY6</accession>
    <name>A0A0M7AAY6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1 7">Transcriptional regulator MraZ</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">mraZ</name>
        <name evidence="10" type="ORF">LAX5112_02606</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="7">Forms oligomers.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
            <location evidence="7">Nucleoid</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the MraZ family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70774.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672189.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02606"/>
    <dbReference type="EnsemblBacteria" id="CTQ70774">
        <property type="protein sequence ID" value="CTQ70774"/>
        <property type="gene ID" value="LAX5112_02606"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009295">
        <property type="term" value="C:nucleoid"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd16321">
        <property type="entry name" value="MraZ_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd16320">
        <property type="entry name" value="MraZ_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1550.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01008">
        <property type="entry name" value="MraZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003444">
        <property type="entry name" value="MraZ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035644">
        <property type="entry name" value="MraZ_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020603">
        <property type="entry name" value="MraZ_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035642">
        <property type="entry name" value="MraZ_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038619">
        <property type="entry name" value="MraZ_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007159">
        <property type="entry name" value="SpoVT-AbrB_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037914">
        <property type="entry name" value="SpoVT-AbrB_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34701">
        <property type="entry name" value="PTHR34701"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02381">
        <property type="entry name" value="MraZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89447">
        <property type="entry name" value="SSF89447"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51740">
        <property type="entry name" value="SPOVT_ABRB"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="10" id="KW-0132">Cell division</keyword>
    <keyword evidence="2 7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 7 8" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <keyword evidence="6 7" id="KW-0804">Transcription</keyword>
    <keyword evidence="4 7" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="SpoVT-AbrB" evidence="9">
        <location>
            <begin position="7"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="domain" description="SpoVT-AbrB" evidence="9">
        <location>
            <begin position="83"/>
            <end position="126"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00013860"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51740"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ70774.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="155" mass="17001" checksum="45335D57D820AB54" modified="2015-12-09" version="1">MAGFVSHFTNRLDVKGRVSIPAPFRAVLARDGFEGLYCISSAHCRAVDAGGNQLVAEIQNRAQQFAKLTPDHDMLAAALFGASEIIKIDGDGRMTLSDMIRDHAGLSDTVTFVGMDYKFQIWEPEQFREYRAEAQKRALAMLSGQLPAPSQGEPV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABG1</accession>
    <name>A0A0M7ABG1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Hydroxyethylthiazole kinase</fullName>
            <ecNumber evidence="9">2.7.1.50</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">4-methyl-5-beta-hydroxyethylthiazole kinase</fullName>
            <shortName evidence="9">TH kinase</shortName>
            <shortName evidence="9">Thz kinase</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9 10" type="primary">thiM</name>
        <name evidence="10" type="ORF">LAX5112_02707</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 9">
            <text>5-(2-hydroxyethyl)-4-methylthiazole + ATP = 4-methyl-5-(2-phosphooxyethyl)-thiazole + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:24212"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17957"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:58296"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.1.50"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 9">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="3 9">Cofactor biosynthesis; thiamine diphosphate biosynthesis; 4-methyl-5-(2-phosphoethyl)-thiazole from 5-(2-hydroxyethyl)-4-methylthiazole: step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the Thz kinase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.50" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71073.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672262.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02707"/>
    <dbReference type="EnsemblBacteria" id="CTQ71073">
        <property type="protein sequence ID" value="CTQ71073"/>
        <property type="gene ID" value="LAX5112_02707"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00060">
        <property type="reaction ID" value="UER00139"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004417">
        <property type="term" value="F:hydroxyethylthiazole kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009228">
        <property type="term" value="P:thiamine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009229">
        <property type="term" value="P:thiamine diphosphate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd01170">
        <property type="entry name" value="THZ_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1190.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00228">
        <property type="entry name" value="Thz_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000417">
        <property type="entry name" value="Hyethyz_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029056">
        <property type="entry name" value="Ribokinase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02110">
        <property type="entry name" value="HK"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000513">
        <property type="entry name" value="Thz_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01099">
        <property type="entry name" value="HYETHTZKNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53613">
        <property type="entry name" value="SSF53613"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="9 10" id="KW-0418">Kinase</keyword>
    <keyword evidence="7 9" id="KW-0460">Magnesium</keyword>
    <keyword evidence="4 9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 9" id="KW-0784">Thiamine biosynthesis</keyword>
    <keyword evidence="9 10" id="KW-0808">Transferase</keyword>
    <feature type="binding site" evidence="9">
        <location>
            <position position="56"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="131"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="160"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="187"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004868"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00228"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ71073.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="257" mass="26918" checksum="18AE9752CAC05C6B" modified="2015-12-09" version="1">MSLSIAASTQELSPETVFSLLERVRSKRPRVHAITNTVAQGFTANVLLALGAVPSMTIAPEEVQSFAASADALLINLGTLDNSRRLAIPVAIDAAKDAGRPVAIDPVFADRSRQRCAYAKELLQTRPSLVRANETEMAALFDTRADVDALISEGTVFAVTGEEDQIEGRGEDYRLRNGHPLLARVTATGCAGGAVLAAFASVEPDTALAAASGLSVFNIAGEIAASRSGGPGSLVPELLDTLYSLTARDIESRLQTG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABH2</accession>
    <name>A0A0M7ABH2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03001</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71997.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672547.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03001"/>
    <dbReference type="EnsemblBacteria" id="CTQ71997">
        <property type="protein sequence ID" value="CTQ71997"/>
        <property type="gene ID" value="LAX5112_03001"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009297">
        <property type="entry name" value="DUF952"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34129">
        <property type="entry name" value="PTHR34129"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06108">
        <property type="entry name" value="DUF952"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ71997.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="114" mass="12365" checksum="7AA319FFE3FDD3F7" modified="2015-12-09" version="1">MTAIFKIVPKTMWQAAEQSGVFKGAPVDLADGFIHFSSAEQVRETAAKHFAGQNDLVIVAFDDTNFGGHLKWEPSRGGALFPHLYSDLDPASAVWVRDLPLGDDGAHVFPELAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABT2</accession>
    <name>A0A0M7ABT2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Proton-translocating NAD(P)(+) transhydrogenase</fullName>
            <ecNumber evidence="3">7.1.1.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">pntA</name>
        <name evidence="12" type="ORF">LAX5112_03146</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>H(+)(in) + NAD(+) + NADPH = H(+)(out) + NADH + NADP(+)</text>
            <dbReference type="Rhea" id="RHEA:47992"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="EC" id="7.1.1.1"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="7.1.1.1" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72339.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008188999.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03146"/>
    <dbReference type="EnsemblBacteria" id="CTQ72339">
        <property type="protein sequence ID" value="CTQ72339"/>
        <property type="gene ID" value="LAX5112_03146"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024605">
        <property type="entry name" value="NADP_transhyd_a_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12769">
        <property type="entry name" value="PNTB_4TM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="9 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-0520">NAD</keyword>
    <keyword evidence="5" id="KW-0521">NADP</keyword>
    <keyword evidence="12" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-1278">Translocase</keyword>
    <keyword evidence="4 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 10" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="61"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="92"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="125"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="domain" description="PNTB_4TM" evidence="11">
        <location>
            <begin position="65"/>
            <end position="153"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000006"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00003943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF12769"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ72339.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="156" mass="16288" checksum="FAC1906B3C3B3D08" modified="2015-12-09" version="1">MSDLSQTEALERAEAAAEAAREAASNAQEAATAAQSYVDQIAGGAADVAVQAASTSAIEPFVFLFSVFVLAIFVGYYVVWSVTPALHTPLMAVTNAISSVIVVGALLAVGVDLTQSDGAYMARVFGFLALVLASVNIFGGFLVTSRMLAMYKKKQR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACC1</accession>
    <name>A0A0M7ACC1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE</fullName>
            <ecNumber evidence="6">2.1.1.163</ecNumber>
            <ecNumber evidence="6">2.1.1.201</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">2-methoxy-6-polyprenyl-1,4-benzoquinol methylase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">Demethylmenaquinone methyltransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ubiE_5</name>
        <name evidence="6" type="synonym">ubiE</name>
        <name evidence="7" type="ORF">LAX5112_02771</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>a 2-demethylmenaquinol + S-adenosyl-L-methionine = a menaquinol + H(+) + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:42640"/>
            <dbReference type="Rhea" id="RHEA-COMP:9539"/>
            <dbReference type="Rhea" id="RHEA-COMP:9563"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:18151"/>
            <dbReference type="ChEBI" id="CHEBI:55437"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="EC" id="2.1.1.163"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>a 2-methoxy-6-all-trans-polyprenyl-1,4-benzoquinol + S-adenosyl-L-methionine = a 6-methoxy-3-methyl-2-all-trans-polyprenyl-1,4-benzoquinol + H(+) + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:28286"/>
            <dbReference type="Rhea" id="RHEA-COMP:10858"/>
            <dbReference type="Rhea" id="RHEA-COMP:10859"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:84166"/>
            <dbReference type="ChEBI" id="CHEBI:84167"/>
            <dbReference type="EC" id="2.1.1.201"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="6">Cofactor biosynthesis; ubiquinone biosynthesis.</text>
    </comment>
    <comment type="pathway">
        <text evidence="6">Quinol/quinone metabolism; menaquinone biosynthesis; menaquinol from 1,4-dihydroxy-2-naphthoate: step 2/2.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the class I-like SAM-binding methyltransferase superfamily. MenG/UbiE family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.163" evidence="6"/>
    <dbReference type="EC" id="2.1.1.201" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71294.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672420.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02771"/>
    <dbReference type="EnsemblBacteria" id="CTQ71294">
        <property type="protein sequence ID" value="CTQ71294"/>
        <property type="gene ID" value="LAX5112_02771"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00079">
        <property type="reaction ID" value="UER00169"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00232"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043333">
        <property type="term" value="F:2-octaprenyl-6-methoxy-1,4-benzoquinone methylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043770">
        <property type="term" value="F:demethylmenaquinone methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102094">
        <property type="term" value="F:S-adenosylmethionine:2-demethylmenaquinol methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102955">
        <property type="term" value="F:S-adenosylmethionine:2-demethylmenaquinol-7 methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102027">
        <property type="term" value="F:S-adenosylmethionine:2-demethylquinol-8 methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009060">
        <property type="term" value="P:aerobic respiration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009234">
        <property type="term" value="P:menaquinone biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006744">
        <property type="term" value="P:ubiquinone biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01813">
        <property type="entry name" value="MenG_UbiE_methyltr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004033">
        <property type="entry name" value="UbiE/COQ5_MeTrFase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023576">
        <property type="entry name" value="UbiE/COQ5_MeTrFase_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01209">
        <property type="entry name" value="Ubie_methyltran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01934">
        <property type="entry name" value="MenG_MenH_UbiE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51608">
        <property type="entry name" value="SAM_MT_UBIE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01183">
        <property type="entry name" value="UBIE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01184">
        <property type="entry name" value="UBIE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 6" id="KW-0474">Menaquinone biosynthesis</keyword>
    <keyword evidence="2 6 7" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 6" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="3 6 7" id="KW-0808">Transferase</keyword>
    <keyword evidence="7" id="KW-0830">Ubiquinone</keyword>
    <keyword evidence="4 6" id="KW-0831">Ubiquinone biosynthesis</keyword>
    <feature type="region of interest" description="S-adenosyl-L-methionine binding" evidence="6">
        <location>
            <begin position="135"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="86"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="107"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022428"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022688"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01813"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ71294.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="263" mass="29116" checksum="CFD65B0F4F2BC0BB" modified="2015-12-09" version="1">MTQQANSQTRTPEDMPISFGFTKVGEGQKQALVDDVFHKVASRYDLMNDLMSGGLHRVWKDAMVSYLAPPKSSASGWRLLDVAGGTGDVSTRVVEKSQRSVKAVVCDINNSMLNVGRDRAEKVGLSDLITFSQGNAEDLPFPDKSFDAYTIAFGIRNVPDIPKALREANRVLKRGGRFMCLEFSEVDVPGLDKVYDAFSFNAIPAMGKWVTGDGEPYQYLVESIRKFPSQERFAEMIREAGLARVTYRNYSGGIAALHSGWKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACG0</accession>
    <name>A0A0M7ACG0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Universal stress protein family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02785</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71334.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451306.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02785"/>
    <dbReference type="EnsemblBacteria" id="CTQ71334">
        <property type="protein sequence ID" value="CTQ71334"/>
        <property type="gene ID" value="LAX5112_02785"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006016">
        <property type="entry name" value="UspA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00582">
        <property type="entry name" value="Usp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Usp" evidence="1">
        <location>
            <begin position="13"/>
            <end position="152"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00582"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71334.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="164" mass="17502" checksum="9CB294F0154A61C1" modified="2015-12-09" version="1">MVAIRKSNEEGHRRKFLVVVDDTPECDRAIVYAAKRAARTSGVVTLLFIIARGDFQHWLGVEDIMRAEAHQEAEATLAKAAQRVRSVARTEPETVIREGTMSEEILELIEADADIAILVLAASTNADGPGPLVSSIAGKSAGTFPIPVTIVPGNLDDDSIAALA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACK7</accession>
    <name>A0A0M7ACK7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Ribosome-binding factor A</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2 4" type="primary">rbfA</name>
        <name evidence="4" type="ORF">LAX5112_02803</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Monomer. Binds 30S ribosomal subunits, but not 50S ribosomal subunits or 70S ribosomes.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the RbfA family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71384.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672345.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02803"/>
    <dbReference type="EnsemblBacteria" id="CTQ71384">
        <property type="protein sequence ID" value="CTQ71384"/>
        <property type="gene ID" value="LAX5112_02803"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030490">
        <property type="term" value="P:maturation of SSU-rRNA"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00003">
        <property type="entry name" value="RbfA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015946">
        <property type="entry name" value="KH_dom-like_a/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000238">
        <property type="entry name" value="RbfA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023799">
        <property type="entry name" value="RbfA_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020053">
        <property type="entry name" value="Ribosome-bd_factorA_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33515">
        <property type="entry name" value="PTHR33515"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02033">
        <property type="entry name" value="RBFA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89919">
        <property type="entry name" value="SSF89919"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01319">
        <property type="entry name" value="RBFA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0690">Ribosome biogenesis</keyword>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="1"/>
            <end position="17"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022517"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00003"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ71384.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="137" mass="15394" checksum="57601372CB5D79D1" modified="2015-12-09" version="1">MAKHSGQDSQGPSQRQLKVGETVRKELSDILTRGRFSDPDLDGVIITIPEVRMTPDLRLATCLVMPLGGANAEKVEKALNRSAKYLRGQVSRRLTMKYMPDLRFVLDTRFDDDDRIGTLLHSPDVARDLDPDAEDEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACP9</accession>
    <name>A0A0M7ACP9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">HTH-type transcriptional regulator SinR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">sinR</name>
        <name evidence="2" type="ORF">LAX5112_03354</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72895.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672767.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03354"/>
    <dbReference type="EnsemblBacteria" id="CTQ72895">
        <property type="protein sequence ID" value="CTQ72895"/>
        <property type="gene ID" value="LAX5112_03354"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013096">
        <property type="entry name" value="Cupin_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07883">
        <property type="entry name" value="Cupin_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01381">
        <property type="entry name" value="HTH_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00530">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="1">
        <location>
            <begin position="10"/>
            <end position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72895.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="183" mass="19513" checksum="E343C2099826D306" modified="2015-12-09" version="1">MNDQDLAQRLIGLRKAKGLSLDELAEKSGISRATLSRIERSDTSPTAAALGRLATSFGVSVADLFGFGAAAHDAKLEHTDQPVWRDPETGFQRRSVSPAISGFRGSIIEGTLPAGTIISYAAPPLPDLEHHLVLLSGALTVTLGDTRHDLAPGDCFRFRLNTPNAYHATGAEPARYLLTVITP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADS8</accession>
    <name>A0A0M7ADS8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Putative ribonuclease Jc</fullName>
            <ecNumber evidence="4">3.1.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_03474</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.-.-" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73248.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672866.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03474"/>
    <dbReference type="EnsemblBacteria" id="CTQ73248">
        <property type="protein sequence ID" value="CTQ73248"/>
        <property type="gene ID" value="LAX5112_03474"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004527">
        <property type="term" value="F:exonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10710">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.15.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001279">
        <property type="entry name" value="Metallo-B-lactamas"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036866">
        <property type="entry name" value="RibonucZ/Hydroxyglut_hydro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011108">
        <property type="entry name" value="RMMBL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042173">
        <property type="entry name" value="RNase_J_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041636">
        <property type="entry name" value="RNase_J_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12706">
        <property type="entry name" value="Lactamase_B_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07521">
        <property type="entry name" value="RMMBL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17770">
        <property type="entry name" value="RNase_J_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00849">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56281">
        <property type="entry name" value="SSF56281"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0269">Exonuclease</keyword>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0540">Nuclease</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="Lactamase_B" evidence="3">
        <location>
            <begin position="23"/>
            <end position="222"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022839"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ73248.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="559" mass="60054" checksum="0FF24BF91C1DBFEC" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADZ0</accession>
    <name>A0A0M7ADZ0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Malonic semialdehyde reductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03328</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72841.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672746.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03328"/>
    <dbReference type="EnsemblBacteria" id="CTQ72841">
        <property type="protein sequence ID" value="CTQ72841"/>
        <property type="gene ID" value="LAX5112_03328"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.109.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029479">
        <property type="entry name" value="Nitroreductase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000415">
        <property type="entry name" value="Nitroreductase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00881">
        <property type="entry name" value="Nitroreductase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55469">
        <property type="entry name" value="SSF55469"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nitroreductase" evidence="1">
        <location>
            <begin position="15"/>
            <end position="159"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00881"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72841.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="200" mass="21882" checksum="273ED39D976BF76C" modified="2015-12-09" version="1">MTRVADHPVDDLFLKRWSPRAFDGAPMPQAELKTILEAARWAPSAFNTQPWRFVYALRGDAEFERLYALLDDFNGSWAVGASALVFVISDSLVDGVSEDGPVPAIFHAFDAGGAWAQAALQATLLGYHTHAMAGLRRDQAHEVLGLPERLKVHVAFAIGRRGDAAQLTPELQQQERPSGRRPLSEIAFHGRFGLPLDAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEV1</accession>
    <name>A0A0M7AEV1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Ribonuclease E</fullName>
            <shortName evidence="5">RNase E</shortName>
            <ecNumber evidence="5">3.1.26.12</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 7" type="primary">rne</name>
        <name evidence="7" type="ORF">LAX5112_03538</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>Endonucleolytic cleavage of single-stranded RNA in A- and U-rich regions.</text>
            <dbReference type="EC" id="3.1.26.12"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="5">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="5">Binds 1 Mg(2+) ion per subunit.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="5">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="5">Binds 2 Zn(2+) ions per homotetramer.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Homotetramer formed by a dimer of dimers.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell inner membrane</location>
            <topology evidence="5">Peripheral membrane protein</topology>
            <orientation evidence="5">Cytoplasmic side</orientation>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the RNase E/G family. RNase E subfamily.</text>
    </comment>
    <dbReference type="EC" id="3.1.26.12" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73419.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672905.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03538"/>
    <dbReference type="EnsemblBacteria" id="CTQ73419">
        <property type="protein sequence ID" value="CTQ73419"/>
        <property type="gene ID" value="LAX5112_03538"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009898">
        <property type="term" value="C:cytoplasmic side of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004521">
        <property type="term" value="F:endoribonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008995">
        <property type="term" value="F:ribonuclease E activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006402">
        <property type="term" value="P:mRNA catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006364">
        <property type="term" value="P:rRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008033">
        <property type="term" value="P:tRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00970">
        <property type="entry name" value="RNase_E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019307">
        <property type="entry name" value="RNA-bd_AU-1/RNase_E/G"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028878">
        <property type="entry name" value="RNase_E"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004659">
        <property type="entry name" value="RNase_E/G"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30001">
        <property type="entry name" value="PTHR30001"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10150">
        <property type="entry name" value="RNase_E_G"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00757">
        <property type="entry name" value="RNaseEG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="5" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="2 5 7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3 5" id="KW-0460">Magnesium</keyword>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="1 5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-0540">Nuclease</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="5" id="KW-0698">rRNA processing</keyword>
    <keyword evidence="5" id="KW-0699">rRNA-binding</keyword>
    <keyword evidence="5" id="KW-0819">tRNA processing</keyword>
    <keyword evidence="5" id="KW-0820">tRNA-binding</keyword>
    <keyword evidence="5" id="KW-0862">Zinc</keyword>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="94"/>
            <end position="247"/>
        </location>
    </feature>
    <feature type="region of interest" description="Required for zinc-mediated homotetramerization and catalytic activity" evidence="5">
        <location>
            <begin position="571"/>
            <end position="574"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="682"/>
            <end position="921"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="94"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="146"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="6">
        <location>
            <begin position="221"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="6">
        <location>
            <begin position="724"/>
            <end position="741"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="760"/>
            <end position="778"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="781"/>
            <end position="804"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="812"/>
            <end position="826"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="470"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <note>catalytic</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="513"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <note>catalytic</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="571"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <note>ligand shared between dimeric partners</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="574"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <note>ligand shared between dimeric partners</note>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ73419.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="921" mass="102276" checksum="52F7A22F79BDEF67" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEY8</accession>
    <name>A0A0M7AEY8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 5">50S ribosomal protein L27</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 7" type="primary">rpmA</name>
        <name evidence="7" type="ORF">LAX5112_03610</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the bacterial ribosomal protein bL27 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73648.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008192734.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03610"/>
    <dbReference type="EnsemblBacteria" id="CTQ73648">
        <property type="protein sequence ID" value="CTQ73648"/>
        <property type="gene ID" value="LAX5112_03610"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00539">
        <property type="entry name" value="Ribosomal_L27"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001684">
        <property type="entry name" value="Ribosomal_L27"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018261">
        <property type="entry name" value="Ribosomal_L27_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15893">
        <property type="entry name" value="PTHR15893"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01016">
        <property type="entry name" value="Ribosomal_L27"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00063">
        <property type="entry name" value="RIBOSOMALL27"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00062">
        <property type="entry name" value="L27"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00831">
        <property type="entry name" value="RIBOSOMAL_L27"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 5" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 5" id="KW-0689">Ribosomal protein</keyword>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010797"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00029549"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00539"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ73648.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="89" mass="9416" checksum="CA9DB316EF1B2C37" modified="2015-12-09" version="1">MAHKKAGGSSRNGRDSAGRRLGIKKYGGEAVIPGNIIARQRGTTWHPGTGVGMGKDHTIFATVEGKVEFQAKANKRTFINVVPVAEAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGH6</accession>
    <name>A0A0M7AGH6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Glutathione import ATP-binding protein GsiA</fullName>
            <ecNumber evidence="8">3.6.3.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">gsiA_4</name>
        <name evidence="8" type="ORF">LAX5112_03334</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.-" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72853.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672750.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03334"/>
    <dbReference type="EnsemblBacteria" id="CTQ72853">
        <property type="protein sequence ID" value="CTQ72853"/>
        <property type="gene ID" value="LAX5112_03334"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015833">
        <property type="term" value="P:peptide transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013563">
        <property type="entry name" value="Oligopep_ABC_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08352">
        <property type="entry name" value="oligo_HPY"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ABC transporter" evidence="7">
        <location>
            <begin position="11"/>
            <end position="258"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="7">
        <location>
            <begin position="279"/>
            <end position="526"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="45"/>
            <end position="52"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="319"/>
            <end position="326"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ72853.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="540" mass="59123" checksum="5BF756CE32B811E8" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGL1</accession>
    <name>A0A0M7AGL1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="8 10">1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase</fullName>
            <ecNumber evidence="8 10">5.3.1.16</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8 11" type="primary">hisA</name>
        <name evidence="11" type="ORF">LAX5112_03807</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 8 10">
            <text>1-(5-phospho-beta-D-ribosyl)-5-[(5-phospho-beta-D-ribosylamino)methylideneamino]imidazole-4-carboxamide = 5-[(5-phospho-1-deoxy-D-ribulos-1-ylimino)methylamino]-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamide</text>
            <dbReference type="Rhea" id="RHEA:15469"/>
            <dbReference type="ChEBI" id="CHEBI:58435"/>
            <dbReference type="ChEBI" id="CHEBI:58525"/>
            <dbReference type="EC" id="5.3.1.16"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3 8 10">Amino-acid biosynthesis; L-histidine biosynthesis; L-histidine from 5-phospho-alpha-D-ribose 1-diphosphate: step 4/9.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 8 10">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 8 9">Belongs to the HisA/HisF family.</text>
    </comment>
    <dbReference type="EC" id="5.3.1.16" evidence="8 10"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74238.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673117.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03807"/>
    <dbReference type="EnsemblBacteria" id="CTQ74238">
        <property type="protein sequence ID" value="CTQ74238"/>
        <property type="gene ID" value="LAX5112_03807"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00031">
        <property type="reaction ID" value="UER00009"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003949">
        <property type="term" value="F:1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000105">
        <property type="term" value="P:histidine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd04732">
        <property type="entry name" value="HisA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01014">
        <property type="entry name" value="HisA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006062">
        <property type="entry name" value="His_biosynth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006063">
        <property type="entry name" value="HisA_bact_arch"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044524">
        <property type="entry name" value="Isoase_HisA-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023016">
        <property type="entry name" value="Isoase_HisA-like_bact"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011060">
        <property type="entry name" value="RibuloseP-bd_barrel"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43090">
        <property type="entry name" value="PTHR43090"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00977">
        <property type="entry name" value="His_biosynth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51366">
        <property type="entry name" value="SSF51366"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00007">
        <property type="entry name" value="TIGR00007"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 8 9" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="8 10" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 8 9" id="KW-0368">Histidine biosynthesis</keyword>
    <keyword evidence="7 8 10" id="KW-0413">Isomerase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" description="Proton acceptor" evidence="8">
        <location>
            <position position="8"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="8">
        <location>
            <position position="129"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000901"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005133"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00009667"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU003657"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU003658"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ74238.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="244" mass="25822" checksum="E60B2211A7C2BD97" modified="2015-12-09" version="1">MILFPAIDLKDGQCVRLKLGDMDQATVFNDDPGAQAKAFEDQGFKWLHVVDLNGAFAGESVNGAAVDAILASTKNPVQLGGGIRTLEHIEAWLEKGISRVILGTVAVRDPDLVKEACKKFPGKVAVGIDAKGGYVAVEGWAETSELTAVNLAKQFEDAGVSAIIYTDIDRDGILKGLNIPSTLELAKAVSIPVIASGGLASIDDIHRLLEPDCAILEGAISGRALYDGRLDPKEAMDLIRASRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGZ0</accession>
    <name>A0A0M7AGZ0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 8">DNA polymerase III subunit epsilon</fullName>
            <ecNumber evidence="3 8">2.7.7.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8 10" type="primary">dnaQ</name>
        <name evidence="10" type="ORF">LAX5112_03783</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6 8">DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5 8">
            <text>a 2'-deoxyribonucleoside 5'-triphosphate + DNA(n) = diphosphate + DNA(n+1)</text>
            <dbReference type="Rhea" id="RHEA:22508"/>
            <dbReference type="Rhea" id="RHEA-COMP:17339"/>
            <dbReference type="Rhea" id="RHEA-COMP:17340"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:61560"/>
            <dbReference type="ChEBI" id="CHEBI:173112"/>
            <dbReference type="EC" id="2.7.7.7"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 8">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 8">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="7 8">DNA polymerase III contains a core (composed of alpha, epsilon and theta chains) that associates with a tau subunit. This core dimerizes to form the POLIII' complex. PolIII' associates with the gamma complex (composed of gamma, delta, delta', psi and chi chains) and with the beta chain to form the complete DNA polymerase III complex.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.7" evidence="3 8"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74169.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673101.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03783"/>
    <dbReference type="EnsemblBacteria" id="CTQ74169">
        <property type="protein sequence ID" value="CTQ74169"/>
        <property type="gene ID" value="LAX5112_03783"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003887">
        <property type="term" value="F:DNA-directed DNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004527">
        <property type="term" value="F:exonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06131">
        <property type="entry name" value="DNA_pol_III_epsilon_Ecoli_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006054">
        <property type="entry name" value="DnaQ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006309">
        <property type="entry name" value="DnaQ_proteo"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013520">
        <property type="entry name" value="Exonuclease_RNaseT/DNA_pol3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00929">
        <property type="entry name" value="RNase_T"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00479">
        <property type="entry name" value="EXOIII"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00573">
        <property type="entry name" value="dnaq"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01406">
        <property type="entry name" value="dnaQ_proteo"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8" id="KW-0235">DNA replication</keyword>
    <keyword evidence="8" id="KW-0239">DNA-directed DNA polymerase</keyword>
    <keyword evidence="8" id="KW-0269">Exonuclease</keyword>
    <keyword evidence="8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="8" id="KW-0460">Magnesium</keyword>
    <keyword evidence="8" id="KW-0464">Manganese</keyword>
    <keyword evidence="8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-0540">Nuclease</keyword>
    <keyword evidence="8 10" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 10" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Exonuclease" evidence="9">
        <location>
            <begin position="2"/>
            <end position="172"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00020352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00024632"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00025483"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00026073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU364087"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="SMART" id="SM00479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ74169.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="239" mass="26111" checksum="E41425B23BBA49CF" modified="2015-12-09" version="1">MREISFDTETTGLNPRGGDRLVEIGGVELINHVPTGNAYHVYINPQRDMPEGAFKVHGLSEEFLSDKPLFEQVADEFLEFVGDGTLVIHNAAFDMGFINMELERCGRRTISNTQVIDTLEIARRKHPSGPNSLDALCSRYGIDNSKRVKHGALLDAEILAEVYLEMIGGKQRALILDPDEEDGLIGSGDAGSEPGELGSFNARPRPVPLSALLRDDEFTAHKAFVAGMGDGALWKKYGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AH85</accession>
    <name>A0A0M7AH85_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Glutamyl-tRNA(Gln) amidotransferase subunit A</fullName>
            <ecNumber evidence="3">6.3.5.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">gatA_4</name>
        <name evidence="3" type="ORF">LAX5112_03394</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the amidase family.</text>
    </comment>
    <dbReference type="EC" id="6.3.5.-" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72984.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03394"/>
    <dbReference type="EnsemblBacteria" id="CTQ72984">
        <property type="protein sequence ID" value="CTQ72984"/>
        <property type="gene ID" value="LAX5112_03394"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016874">
        <property type="term" value="F:ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1300.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000120">
        <property type="entry name" value="Amidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023631">
        <property type="entry name" value="Amidase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036928">
        <property type="entry name" value="AS_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11895">
        <property type="entry name" value="PTHR11895"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01425">
        <property type="entry name" value="Amidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75304">
        <property type="entry name" value="SSF75304"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0436">Ligase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Amidase" evidence="2">
        <location>
            <begin position="28"/>
            <end position="413"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009199"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01425"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ72984.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="425" mass="44512" checksum="26C11D598B194D29" modified="2015-12-09" version="1">MNAAVSWDAATVGERLEVALEKANSDPAAAQVYIKLLETRARQQVAKAAENDGPLKGALVSVKALFDVAGEVTTSATTVLKNDPPATEDAPAIARLDAAGAVFTGLTNMSEFAYSGLGLNPHYGTPENALYPGCAPGGSTSGGAVAVALGLCDIAIGSDTGGSLRIPAAFNGITGFKPTQSSVSMAGGKPLSDSLDSFGPMAKTVAECELTWQVMAARAITPVEPKAARLVVPKNFGFDEIEAPVAEGFKAVVEKLRAAGFEVVEKDLAVIDLYAKVPPWHMTSVESRAHYEDHFQTSPEKFDPRVHARMGRAEEISAVDYRQTLNRRQTLIQAFAEEVGSDILLLPTTPILPPKIADLVDDGAFNRLNLLALRNPSLANVCDGCGIALPYRNAGKTLSAMLVAPGGKDEKLLACAKAVEAVLGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJH9</accession>
    <name>A0A0M7AJH9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Enterobactin exporter EntS</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_03908</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74576.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673237.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03908"/>
    <dbReference type="EnsemblBacteria" id="CTQ74576">
        <property type="protein sequence ID" value="CTQ74576"/>
        <property type="gene ID" value="LAX5112_03908"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="45"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="215"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="251"/>
            <end position="269"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="281"/>
            <end position="301"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="307"/>
            <end position="333"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="345"/>
            <end position="365"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="377"/>
            <end position="396"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="6">
        <location>
            <begin position="9"/>
            <end position="400"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ74576.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="442" mass="47506" checksum="B5513C4D01777092" modified="2015-12-09" version="1">MFSVLVNRTYRHLFFAQVVALFGTGLMTVALALLAYDLEGADAGIVLGTALAIKMIVYVTLSPVAAGFAARFPRRAFLIFLDLVRATLALALPFVDAVWQIYVLIALLQSASAAFTPTFQATIPDILTDEDDYTNALSLSRLAYDLENLLSPMAAAILVSAIGFHWLFTWTSAGFLVSAALVFCTALPAMKAAQTASPIKRIKNGVKIYLKTPRLRALMALNLTVAASGAMVIVNGVVLVKSKLGLSDTDLALSMAAYGGGSMATAFLVPKFLKRYTERSVMLTGGAMLPTLLLVFAAFYSNLAENALWPALLISWAFMGASMSAVLVPSGRLLRNSAHAEDRPLVFAAQFALSHAGWLITYPLAGWLGSAGSIPQTLTVLALVAAPAALAACWLWPKDDPRFLIHDHPDLPPDHPHLINAHGNRHGHDFVIDGLHPNWPDR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKI5</accession>
    <name>A0A0M7AKI5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">PilZ domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04103</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ75061.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451982.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75061">
        <property type="protein sequence ID" value="CTQ75061"/>
        <property type="gene ID" value="LAX5112_04103"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035438">
        <property type="term" value="F:cyclic-di-GMP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009875">
        <property type="entry name" value="PilZ_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07238">
        <property type="entry name" value="PilZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PilZ" evidence="1">
        <location>
            <begin position="17"/>
            <end position="93"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07238"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75061.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="122" mass="14030" checksum="6D0A251536ED04E9" modified="2015-12-09" version="1">MFKGLCLNRQATMDAVQKRLFPRRRTRLRPAKLASLTNEYICDCTTRDISAGGLRILLNEDIPLPKEFYVFDVNERTIAEVRLSWRDGLEAGVAYLVPPASISFYENTGVRRLAQRFYAVED</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKL2</accession>
    <name>A0A0M7AKL2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase</fullName>
            <ecNumber evidence="3">3.6.1.40</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">gppA_2</name>
        <name evidence="3" type="ORF">LAX5112_04050</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.6.1.40" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ74946.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04050"/>
    <dbReference type="EnsemblBacteria" id="CTQ74946">
        <property type="protein sequence ID" value="CTQ74946"/>
        <property type="gene ID" value="LAX5112_04050"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008894">
        <property type="term" value="F:guanosine-5'-triphosphate,3'-diphosphate diphosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003695">
        <property type="entry name" value="Ppx_GppA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02541">
        <property type="entry name" value="Ppx-GppA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="SSF53067"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ppx-GppA" evidence="2">
        <location>
            <begin position="132"/>
            <end position="434"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="23"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="78"/>
            <end position="105"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02541"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ74946.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="458" mass="49931" checksum="303628C6373FE9AC" modified="2015-12-09" version="1">MEAAIAGTDAPQFDGSPSAKGKKAASRRGRKRWQAKKNRGQAAHTDQETQAVEIETGADPQVSRPLNGVPTPDGGPRPPEPSKRDPQPIRRPRTRGPEGARNGHRRHPVQTSGNAPLYAALDLGTNNCRLLIARPEERGFRVVDAYSRIVRLGEGVGAHRRLGDAAMDRAIDALGQCHRKLAERGVERSRLIATEACRAAENGADFISRVQAETGLALEIVNRETEARLAVAGCASLVDHDADGVILFDIGGGSSEIVWLDLRNRCGARGYALTRFIRSWISLPVGVVNLAERHGGVHVTPDIFEAMVDDAADHLAEFNLADDLSEAISSGKVHMLGTSGTVTTLAGVHLGLRRYDRRRVDGAWLEDTQVGGMIDQLRDMPYEARVSNPCIGEDRADLVLAGCAILEAIRRRWSCPRLRVADRGLREGILTELMSADGVWSRRKMGPRQGRGRPRNRQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKN6</accession>
    <name>A0A0M7AKN6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="13">Putative multidrug export ATP-binding/permease protein</fullName>
            <ecNumber evidence="13">3.6.3.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">LAX5112_03832</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.-" evidence="13"/>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74343.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673149.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03832"/>
    <dbReference type="EnsemblBacteria" id="CTQ74343">
        <property type="protein sequence ID" value="CTQ74343"/>
        <property type="gene ID" value="LAX5112_03832"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008643">
        <property type="term" value="P:carbohydrate transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1560.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011527">
        <property type="entry name" value="ABC1_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036640">
        <property type="entry name" value="ABC1_TM_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039421">
        <property type="entry name" value="Type_1_exporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24221">
        <property type="entry name" value="PTHR24221"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00664">
        <property type="entry name" value="ABC_membrane"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90123">
        <property type="entry name" value="SSF90123"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50929">
        <property type="entry name" value="ABC_TM1F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 8 13" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="13" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="4 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0762">Sugar transport</keyword>
    <keyword evidence="3 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 10" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="59"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="92"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="175"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="203"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="287"/>
            <end position="310"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="322"/>
            <end position="343"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="12">
        <location>
            <begin position="60"/>
            <end position="348"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="11">
        <location>
            <begin position="382"/>
            <end position="616"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="9">
        <location>
            <begin position="1"/>
            <end position="15"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="415"/>
            <end position="422"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022597"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="CTQ74343.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="651" mass="71526" checksum="53EC065FACA29458" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKY4</accession>
    <name>A0A0M7AKY4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Isoquinoline 1-oxidoreductase subunit beta</fullName>
            <ecNumber evidence="2">1.3.99.16</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">iorB_2</name>
        <name evidence="2" type="ORF">LAX5112_04020</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.3.99.16" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74880.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673304.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04020"/>
    <dbReference type="EnsemblBacteria" id="CTQ74880">
        <property type="protein sequence ID" value="CTQ74880"/>
        <property type="gene ID" value="LAX5112_04020"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047121">
        <property type="term" value="F:isoquinoline 1-oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000674">
        <property type="entry name" value="Ald_Oxase/Xan_DH_a/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008274">
        <property type="entry name" value="AldOxase/xan_DH_Mopterin-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037165">
        <property type="entry name" value="AldOxase/xan_DH_Mopterin-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012368">
        <property type="entry name" value="OxRdtase_Mopterin-bd_su_IorB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006311">
        <property type="entry name" value="TAT_signal"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019546">
        <property type="entry name" value="TAT_signal_bac_arc"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02738">
        <property type="entry name" value="Ald_Xan_dh_C2"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF036389">
        <property type="entry name" value="IOR_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01008">
        <property type="entry name" value="Ald_Xan_dh_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56003">
        <property type="entry name" value="SSF56003"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01409">
        <property type="entry name" value="TAT_signal_seq"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ald_Xan_dh_C" evidence="1">
        <location>
            <begin position="213"/>
            <end position="292"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM01008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74880.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="729" mass="77818" checksum="F0EF1FFEA8D2C7DF" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALP0</accession>
    <name>A0A0M7ALP0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Chromosome-partitioning protein ParB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">parB_2</name>
        <name evidence="4" type="ORF">LAX5112_04239</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ParB family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75451.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673475.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000021.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04239"/>
    <dbReference type="EnsemblBacteria" id="CTQ75451">
        <property type="protein sequence ID" value="CTQ75451"/>
        <property type="gene ID" value="LAX5112_04239"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd16405">
        <property type="entry name" value="RepB_like_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004437">
        <property type="entry name" value="ParB/RepB/Spo0J"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003115">
        <property type="entry name" value="ParB/Sulfiredoxin_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036086">
        <property type="entry name" value="ParB/Sulfiredoxin_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017819">
        <property type="entry name" value="Plasmid_partition_RepB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011111">
        <property type="entry name" value="Plasmid_RepB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037972">
        <property type="entry name" value="RepB_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02195">
        <property type="entry name" value="ParBc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07506">
        <property type="entry name" value="RepB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00470">
        <property type="entry name" value="ParB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF110849">
        <property type="entry name" value="SSF110849"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00180">
        <property type="entry name" value="parB_part"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03454">
        <property type="entry name" value="partition_RepB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ParB" evidence="3">
        <location>
            <begin position="89"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00470"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ75451.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="360" mass="39274" checksum="A912EEC2CFD5333C" modified="2015-12-09" version="1">MTKRKDRLKALFAGEPETAPAESTAAPAPVQPQEARHEKKAALAAPSPTSNGDPVSERPRSASGAVKAMGLSLGQMAQELKEQTGERVVTLDPSHIEPSPVADRLTVDAHLDAGFAELKASLESRGQQVPVLVRRHADAAKSADGWYQAAYGHRRIRAAKELGINVLAIVRELDDDALILAQGKENAERRDLSFIERAFFARSLIDHGFERSLVQDALGVHKTEMTRLLQVADKVPYPIAKAIGPAPKAGRPRWHQLAEMFDGEAAEVIARDEITSEVFLACDSDHRFQRLFSRLGKRKSKPAQKQTIKSRSGKPLADIKGSTIQLAKTAPDGFTHYLAKQLPDLLAAFEADKNKELPDG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALV6</accession>
    <name>A0A0M7ALV6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_04314</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000022">
        <property type="protein sequence ID" value="CTQ75647.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008192952.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000022.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04314"/>
    <dbReference type="EnsemblBacteria" id="CTQ75647">
        <property type="protein sequence ID" value="CTQ75647"/>
        <property type="gene ID" value="LAX5112_04314"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd05018">
        <property type="entry name" value="CoxG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.530.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010419">
        <property type="entry name" value="CO_DH_gsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023393">
        <property type="entry name" value="START-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38588">
        <property type="entry name" value="PTHR38588"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06240">
        <property type="entry name" value="COXG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="220"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="190"/>
            <end position="217"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ75647.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="242" mass="24681" checksum="C89AC240E98E3D3C" modified="2015-12-09" version="1">MDISGSQVIAASRDAVWAALNDAEILKASIPGCESLEKTSDTEMTAAVTSKIGPVKAKFKGAVTLENINAPESYTIVGEGKGGVAGFAKGSADVKLTEVEGGTLLEYTAKAQVGGKLAQLGSRLIDSTAKKMAEDFFAKFSEAVAGPAPAAEETTETVAEASAGNAEELDPGVAEEAKRLAVEDTPSGVVHALEEAEHAVEDQLHKAEENIESAAGRGAFGGPMVWGLIALAGLIVVLALAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AM50</accession>
    <name>A0A0M7AM50_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">SH3b domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_04005</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74853.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673296.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04005"/>
    <dbReference type="EnsemblBacteria" id="CTQ74853">
        <property type="protein sequence ID" value="CTQ74853"/>
        <property type="gene ID" value="LAX5112_04005"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003646">
        <property type="entry name" value="SH3-like_bac-type"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08239">
        <property type="entry name" value="SH3_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00287">
        <property type="entry name" value="SH3b"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51781">
        <property type="entry name" value="SH3B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809536" description="SH3b domain-containing protein" evidence="2">
        <location>
            <begin position="26"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="domain" description="SH3b" evidence="3">
        <location>
            <begin position="22"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="121"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="122"/>
            <end position="170"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51781"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ74853.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="176" mass="19007" checksum="ED8ED8547EE61A8C" modified="2015-12-09" version="1">MLKQATLVMMTAGFLAQPAMSQANASVAYTTSGLNMRAGPGTSYPVITTLPQGAAVQISGCTAGYGWCDASYGNVSGWVSGSYLVYGTRGSYYRQPIPSAGVYIGVPIINRNVTIYNRPVRPRVYAPPPRGPRGPYYQPRPPRAVAPMLPDRPPRAQVRPPRPQHPVQPPRGPRRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AN34</accession>
    <name>A0A0M7AN34_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Putative ABC transporter-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">LAX5112_04551</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the bacterial solute-binding protein 5 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000026">
        <property type="protein sequence ID" value="CTQ76309.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673778.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000026.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04551"/>
    <dbReference type="EnsemblBacteria" id="CTQ76309">
        <property type="protein sequence ID" value="CTQ76309"/>
        <property type="gene ID" value="LAX5112_04551"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039424">
        <property type="entry name" value="SBP_5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000914">
        <property type="entry name" value="SBP_5_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30290">
        <property type="entry name" value="PTHR30290"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00496">
        <property type="entry name" value="SBP_bac_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0574">Periplasm</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809779" evidence="3">
        <location>
            <begin position="23"/>
            <end position="682"/>
        </location>
    </feature>
    <feature type="domain" description="SBP_bac_5" evidence="4">
        <location>
            <begin position="135"/>
            <end position="551"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ76309.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="682" mass="75365" checksum="39056D5033CCA4FC" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AN47</accession>
    <name>A0A0M7AN47_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04421</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75951.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75951">
        <property type="protein sequence ID" value="CTQ75951"/>
        <property type="gene ID" value="LAX5112_04421"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ75951.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="49" mass="5457" checksum="257036C5BB54C349" modified="2015-12-09" version="1">MHQPKGGLCANCIHSVRICSHLDFTSMPVIKTYDDGTKAVKCSDYSKRN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANJ9</accession>
    <name>A0A0M7ANJ9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 10">Flagellar motor switch protein FliG</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="primary">fliG_2</name>
        <name evidence="14" type="ORF">LAX5112_04203</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 10">Bacterial flagellum basal body</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="10">Cell inner membrane</location>
            <topology evidence="10">Peripheral membrane protein</topology>
            <orientation evidence="10">Cytoplasmic side</orientation>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Peripheral membrane protein</topology>
            <orientation evidence="2">Cytoplasmic side</orientation>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 10">Belongs to the FliG family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75363.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673437.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04203"/>
    <dbReference type="EnsemblBacteria" id="CTQ75363">
        <property type="protein sequence ID" value="CTQ75363"/>
        <property type="gene ID" value="LAX5112_04203"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009425">
        <property type="term" value="C:bacterial-type flagellum basal body"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003774">
        <property type="term" value="F:cytoskeletal motor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071973">
        <property type="term" value="P:bacterial-type flagellum-dependent cell motility"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006935">
        <property type="term" value="P:chemotaxis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000090">
        <property type="entry name" value="Flg_Motor_Flig"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023087">
        <property type="entry name" value="Flg_Motor_Flig_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011002">
        <property type="entry name" value="FliG_a-hlx"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032779">
        <property type="entry name" value="FliG_M"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028263">
        <property type="entry name" value="FliG_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30534">
        <property type="entry name" value="PTHR30534"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01706">
        <property type="entry name" value="FliG_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14841">
        <property type="entry name" value="FliG_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14842">
        <property type="entry name" value="FliG_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF003161">
        <property type="entry name" value="FliG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00954">
        <property type="entry name" value="FLGMOTORFLIG"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48029">
        <property type="entry name" value="SSF48029"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00207">
        <property type="entry name" value="fliG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 10" id="KW-0975">Bacterial flagellum</keyword>
    <keyword evidence="10" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="5 10" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="14" id="KW-0966">Cell projection</keyword>
    <keyword evidence="6 10" id="KW-0145">Chemotaxis</keyword>
    <keyword evidence="14" id="KW-0969">Cilium</keyword>
    <keyword evidence="7 10" id="KW-0283">Flagellar rotation</keyword>
    <keyword evidence="14" id="KW-0282">Flagellum</keyword>
    <keyword evidence="8 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FliG_N" evidence="13">
        <location>
            <begin position="20"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="domain" description="FliG_M" evidence="12">
        <location>
            <begin position="132"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="domain" description="FliG_C" evidence="11">
        <location>
            <begin position="232"/>
            <end position="338"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004287"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010299"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00021870"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022500"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022779"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023143"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRNR" id="PIRNR003161"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF01706"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF14841"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF14842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="CTQ75363.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="349" mass="38891" checksum="BAFFC2839B851E61" modified="2015-12-09" version="1">MASDQLQQQLTVSADEEDRELRGAERAAVLLLALGESHGAPIWSKLDEIEVRQVSAAMANLGPVTPTMLEDLFKDFVRRISSKGALTGNVDATERLLSTFLSGDKVSVIMEEIRGPAGRNMWEKLSNVQENVLANYLKNEYPQTVAVVLSKINSDHAARVLGILPEELALEVVSRMLRMDAVQKEVLEKVEQTLRVEFMSNLTNTSRRDSHEMMADIFNNFDRQTEARFLAALEEDNREAADRIKTLMFTFDDLLKLDAASAQTLLRHVEKDQLAIALKGSTDAAREFFFGNMSSRAAKLLQDDMEALGPVRLRDVDDAQTGMVNQAKDLAAKGEIMISKSKGDEEIIY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANU3</accession>
    <name>A0A0M7ANU3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Spermidine/putrescine transport system permease protein PotB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">potB_3</name>
        <name evidence="7" type="ORF">LAX5112_04637</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000027">
        <property type="protein sequence ID" value="CTQ76569.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04637"/>
    <dbReference type="EnsemblBacteria" id="CTQ76569">
        <property type="protein sequence ID" value="CTQ76569"/>
        <property type="gene ID" value="LAX5112_04637"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="37"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="99"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="125"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="176"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="238"/>
            <end position="260"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="280"/>
            <end position="305"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="93"/>
            <end position="301"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ76569.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="311" mass="35027" checksum="589DF08555F19583" modified="2015-12-09" version="1">MTDQSHLFLHSQTAAAAGKKAKPAFQWSRLPNNLTGWLLSLPLTVVLFFFLVLPICMIVVVSFWGATEFSIYPAFQFDNYEFLLTSPVTYQVFWNTVKYALITWFFTLVIGFTVAYFLAFHVRSLTWQIVLFLLCTIPFWTSNIIRMISWIPFLGRNGIANSTLISMGVIDEPLEWLLFSDFSVILAFVHLYTLFMVVPIFNTMMRIDTSLIEAARDAGASGYQTLTNVIIPLTKPGIMIGSIFVVTLVMGDFITVRFMSGSQKANVGRLISNDIALLQYPSAAATAVILLITVLLVISVLLRFVDIRKEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AP45</accession>
    <name>A0A0M7AP45_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6 8">UDP-glucose 4-epimerase</fullName>
            <ecNumber evidence="5 8">5.1.3.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">galE_4</name>
        <name evidence="10" type="ORF">LAX5112_04515</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 8">
            <text>UDP-alpha-D-glucose = UDP-alpha-D-galactose</text>
            <dbReference type="Rhea" id="RHEA:22168"/>
            <dbReference type="ChEBI" id="CHEBI:58885"/>
            <dbReference type="ChEBI" id="CHEBI:66914"/>
            <dbReference type="EC" id="5.1.3.2"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 8">
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="3 8">Carbohydrate metabolism; galactose metabolism.</text>
    </comment>
    <comment type="subunit">
        <text evidence="8">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4 8">Belongs to the NAD(P)-dependent epimerase/dehydratase family.</text>
    </comment>
    <dbReference type="EC" id="5.1.3.2" evidence="5 8"/>
    <dbReference type="EMBL" id="CXWD01000025">
        <property type="protein sequence ID" value="CTQ76202.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673713.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000025.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04515"/>
    <dbReference type="EnsemblBacteria" id="CTQ76202">
        <property type="protein sequence ID" value="CTQ76202"/>
        <property type="gene ID" value="LAX5112_04515"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00214"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003978">
        <property type="term" value="F:UDP-glucose 4-epimerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006012">
        <property type="term" value="P:galactose metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd05247">
        <property type="entry name" value="UDP_G4E_1_SDR_e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016040">
        <property type="entry name" value="NAD(P)-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005886">
        <property type="entry name" value="UDP_G4E"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16363">
        <property type="entry name" value="GDP_Man_Dehyd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01179">
        <property type="entry name" value="galE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="8 10" id="KW-0413">Isomerase</keyword>
    <keyword evidence="7 8" id="KW-0520">NAD</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NAD(P)-bd_dom" evidence="9">
        <location>
            <begin position="4"/>
            <end position="327"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000083"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001911"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00007637"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00013189"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00018569"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU366046"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF16363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ76202.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="343" mass="37405" checksum="FE0EDB45D8F9F820" modified="2015-12-09" version="1">MTILITGGAGYIGSHCCVTFLEAGHDVVVLDNFSNSSPESLKRITAITGKEVAREEGDIRDRATLERVLREHNCTGVIHFAGLKAVGESIKVPLSYYANNITGTLELLAAMESCNVRQLIFSSSATVYGEPKFLPLTEDHPLSATNPYGRTKLMIEEILGDVAASDPSWRFGILRYFNPVGAHKSGLIGEDPQGIPNNLMPFVSQVASGRRERLSVFGNDYDTRDGTGVRDYIHVVDLVEGHLRAYEALASLTDTDNSFTVNLGTGTGYSVLEMVKAFERASNQAIPYTIAPRRPGDVAEVYADTNKAADKLNWTAGRGLEDMCSDTWNWACKNPKGYDSAKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APD9</accession>
    <name>A0A0M7APD9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Putative thiamine biosynthesis protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_04470</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ76110.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04470"/>
    <dbReference type="EnsemblBacteria" id="CTQ76110">
        <property type="protein sequence ID" value="CTQ76110"/>
        <property type="gene ID" value="LAX5112_04470"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009228">
        <property type="term" value="P:thiamine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027939">
        <property type="entry name" value="NMT1/THI5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015168">
        <property type="entry name" value="SsuA/THI5"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31528">
        <property type="entry name" value="PTHR31528"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09084">
        <property type="entry name" value="NMT1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809498" evidence="2">
        <location>
            <begin position="25"/>
            <end position="329"/>
        </location>
    </feature>
    <feature type="domain" description="NMT1" evidence="3">
        <location>
            <begin position="39"/>
            <end position="256"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="307"/>
            <end position="329"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF09084"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ76110.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="329" mass="35367" checksum="D9B5FFE14CB3883E" modified="2015-12-09" version="1">MKALKSLALASVLGAGLFATGAQAADELTLQLKWVTQGQFAGYYVAKDKGFYEEEDLDVTIKPGGPDIAPPQVIAGGGADVIIDWMPSALASREKGVPLVNIAQPFQKSGMMLTCRKETGISSPEDFRGKTLGVWFFGNEYPFLSWMSQLGIATDGSDGGVTVLKQGFNVDPLLQKQADCISTMTYNEYWQVIDAGIPAEELVVFKYEDQGVATLEDGLYVLESSLEDPAMVDKLARFVKASMKGWAYAAENPEEAAEIVLENDATGAQTEKHQIRMVGEINKLVDGSDGKLDMAAYERTVKSLLSGGSDPVITKEPEGATSTAVTDKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APR4</accession>
    <name>A0A0M7APR4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04812</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000031">
        <property type="protein sequence ID" value="CTQ77128.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04812"/>
    <dbReference type="EnsemblBacteria" id="CTQ77128">
        <property type="protein sequence ID" value="CTQ77128"/>
        <property type="gene ID" value="LAX5112_04812"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ77128.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="308" mass="35047" checksum="5090CC606FF056F9" modified="2015-12-09" version="1">MMRQNLFSPRKLVRKFTPAMRPLPALPHGAVQMPVKTGETLGRIGSLEVRMARNFKEVKKAQRLRYEVFYEEMSAVADAQTLATRRDADPFDAYCDHLLVVDHASLKRNKLGRLKPEIVGTYRVLRQDVADRHGGFYTSAEYDIQSLIDANPGKRFMELGRSCVLKPYRNKKTIELLWHGLWSYILRHKIDVMLGCASIEGTNPDAMADQLGFLHHNSLAPEEWRVRAIENRFVDMNRRPAADINQKEALRALPPLIKGYLRLGAFVGEGAVIDHQFGTTDVLIVMPVSELNTRYVNYYGADASRYAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="31" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APV0</accession>
    <name>A0A0M7APV0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 13">Chaperone protein ClpB</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="primary">clpB_2</name>
        <name evidence="13" type="synonym">clpB</name>
        <name evidence="15" type="ORF">LAX5112_04822</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE. Acts before DnaK, in the processing of protein aggregates. Protein binding stimulates the ATPase activity; ATP hydrolysis unfolds the denatured protein aggregates, which probably helps expose new hydrophobic binding sites on the surface of ClpB-bound aggregates, contributing to the solubilization and refolding of denatured protein aggregates by DnaK.</text>
    </comment>
    <comment type="subunit">
        <text evidence="10">Homohexamer. The oligomerization is ATP-dependent.</text>
    </comment>
    <comment type="subunit">
        <text evidence="13">Homohexamer; The oligomerization is ATP-dependent.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 13">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 12">Belongs to the ClpA/ClpB family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000032">
        <property type="protein sequence ID" value="CTQ77168.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673980.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000032.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04822"/>
    <dbReference type="EnsemblBacteria" id="CTQ77168">
        <property type="protein sequence ID" value="CTQ77168"/>
        <property type="gene ID" value="LAX5112_04822"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042026">
        <property type="term" value="P:protein refolding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009408">
        <property type="term" value="P:response to heat"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1780.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003959">
        <property type="entry name" value="ATPase_AAA_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017730">
        <property type="entry name" value="Chaperonin_ClpB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019489">
        <property type="entry name" value="Clp_ATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036628">
        <property type="entry name" value="Clp_N_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004176">
        <property type="entry name" value="Clp_R_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001270">
        <property type="entry name" value="ClpA/B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018368">
        <property type="entry name" value="ClpA/B_CS1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028299">
        <property type="entry name" value="ClpA/B_CS2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041546">
        <property type="entry name" value="ClpA/ClpB_AAA_lid"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00004">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07724">
        <property type="entry name" value="AAA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17871">
        <property type="entry name" value="AAA_lid_9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02861">
        <property type="entry name" value="Clp_N"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10431">
        <property type="entry name" value="ClpB_D2-small"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00300">
        <property type="entry name" value="CLPPROTEASEA"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM01086">
        <property type="entry name" value="ClpB_D2-small"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81923">
        <property type="entry name" value="SSF81923"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03346">
        <property type="entry name" value="chaperone_ClpB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51903">
        <property type="entry name" value="CLP_R"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00870">
        <property type="entry name" value="CLPAB_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00871">
        <property type="entry name" value="CLPAB_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 12" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8 12" id="KW-0143">Chaperone</keyword>
    <keyword evidence="7 13" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="13" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 12" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 11" id="KW-0677">Repeat</keyword>
    <keyword evidence="13" id="KW-0346">Stress response</keyword>
    <feature type="domain" description="Clp R" evidence="14">
        <location>
            <begin position="3"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="13">
        <location>
            <begin position="413"/>
            <end position="493"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008675"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00017574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00025613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00026057"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU004432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU362034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS51903"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="CTQ77168.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="865" mass="95223" checksum="25ED276F7E8583C9" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APZ2</accession>
    <name>A0A0M7APZ2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Glutaredoxin</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">grxC</name>
        <name evidence="4" type="ORF">LAX5112_04833</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 2">Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the glutaredoxin family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000032">
        <property type="protein sequence ID" value="CTQ77198.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008195292.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000032.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04833"/>
    <dbReference type="EnsemblBacteria" id="CTQ77198">
        <property type="protein sequence ID" value="CTQ77198"/>
        <property type="gene ID" value="LAX5112_04833"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0097573">
        <property type="term" value="F:glutathione oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045454">
        <property type="term" value="P:cell redox homeostasis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03418">
        <property type="entry name" value="GRX_GRXb_1_3_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002109">
        <property type="entry name" value="Glutaredoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014025">
        <property type="entry name" value="Glutaredoxin_subgr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011900">
        <property type="entry name" value="GRX_bact"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00462">
        <property type="entry name" value="Glutaredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00160">
        <property type="entry name" value="GLUTAREDOXIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02181">
        <property type="entry name" value="GRX_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2" id="KW-0249">Electron transport</keyword>
    <keyword evidence="2" id="KW-0676">Redox-active center</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="domain" description="Glutaredoxin" evidence="3">
        <location>
            <begin position="4"/>
            <end position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002549"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU364065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00462"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ77198.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="85" mass="9456" checksum="9898F3A781FAE1F9" modified="2015-12-09" version="1">MSDVTIYTRQLCGFCTAAKRLLEKKGVSFTEHDATFDPKLRQEMVQKANGRATFPQIFIGSKHVGGCDDLHDLERAGKLDQLLAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQ09</accession>
    <name>A0A0M7AQ09_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">EF hand</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_04624</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000027">
        <property type="protein sequence ID" value="CTQ76532.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76532">
        <property type="protein sequence ID" value="CTQ76532"/>
        <property type="gene ID" value="LAX5112_04624"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011992">
        <property type="entry name" value="EF-hand-dom_pair"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018247">
        <property type="entry name" value="EF_Hand_1_Ca_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002048">
        <property type="entry name" value="EF_hand_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13202">
        <property type="entry name" value="EF-hand_5"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47473">
        <property type="entry name" value="SSF47473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00018">
        <property type="entry name" value="EF_HAND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50222">
        <property type="entry name" value="EF_HAND_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809584" evidence="1">
        <location>
            <begin position="24"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="2">
        <location>
            <begin position="70"/>
            <end position="100"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50222"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ76532.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="100" mass="10587" checksum="813A0DEF31BB1076" modified="2015-12-09" version="1">MTTYRSVFGAIALLALGGLPATASSQTAETAARNYQAADRNGDGVLVYEEFVSFIDMNAADNLGNAGRIQSRGLYARAFKRLDGNSDGRVTPAELQKAAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQF2</accession>
    <name>A0A0M7AQF2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Formyl-coenzyme A transferase</fullName>
            <ecNumber evidence="2">2.8.3.16</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">frc_2</name>
        <name evidence="2" type="ORF">LAX5112_04439</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.8.3.16" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ76023.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673648.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000024.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04439"/>
    <dbReference type="EnsemblBacteria" id="CTQ76023">
        <property type="protein sequence ID" value="CTQ76023"/>
        <property type="gene ID" value="LAX5112_04439"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033608">
        <property type="term" value="F:formyl-CoA transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1540.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10540">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003673">
        <property type="entry name" value="CoA-Trfase_fam_III"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044855">
        <property type="entry name" value="CoA-Trfase_III_dom3_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023606">
        <property type="entry name" value="CoA-Trfase_III_dom_1_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02515">
        <property type="entry name" value="CoA_transf_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89796">
        <property type="entry name" value="SSF89796"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="342"/>
            <end position="368"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76023.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="405" mass="44019" checksum="6B73D433C6F3F612" modified="2015-12-09" version="1">MGPLEGIRVIDMSAVLAGPVATQTLGDYGADVIKIESPAGDVLRQVGPMRSAAMGPLYMNANYNKRSVCLDLKTEDGREVLLGLIRSADIFVTNSRPKAMMRLGLSYDTIQMVKPDIIYTALLGFDEGGRYSGRPAYDDLIQGAVGLPFLQAKASGGVPRYFPNAIADRAFGLAASNAILAALVHKGRTGEGQQIAIPMFETVANFVLGDHLGGLSFEPPLDAGGYHRLTSKARRPLRTKDGYICLLLYSDAQWGRFLEVTGKPTVLATDNRFSSFAGRQKHFDDLCKAVGDVTKTKTSSEWLELLETADIPVMPMHSLESLLDDPHLNDVGFFETYDHPSEGRMRRTKVPGRWSRTQSNTHKPPPVLGEHTVEVLKETGLSEDTIYELLQSGIASAPASEPVPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQJ8</accession>
    <name>A0A0M7AQJ8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04902</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000034">
        <property type="protein sequence ID" value="CTQ77415.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674045.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000034.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77415">
        <property type="protein sequence ID" value="CTQ77415"/>
        <property type="gene ID" value="LAX5112_04902"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ77415.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="256" mass="29128" checksum="B5C65B391C289706" modified="2015-12-09" version="1">MIALLVARGFPRLVQPADLSLDPSGRFQWTCLQEAVSAANKKITAQVALGVGVDERIEANHPALRTAFVQSVRTRQRIVIDNVARLFDNHDWDSALAFQTAIQKSDINIFCALQGARLEELDQQTLRVLILDRLHQSKERQAAREFRKTLQKQHVRAKPKASAGSPSQATEKLALYDEIFISIHIHKLCNDWITEDLSPPFTVKEIVDGLNEKGIQTQRGKPWTPPNLRKFLRVKRKTDPESKLWDLIKLPKPTEF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASR6</accession>
    <name>A0A0M7ASR6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Multidrug transporter activation protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">mta_3</name>
        <name evidence="2" type="ORF">LAX5112_04917</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000034">
        <property type="protein sequence ID" value="CTQ77456.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77456">
        <property type="protein sequence ID" value="CTQ77456"/>
        <property type="gene ID" value="LAX5112_04917"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009061">
        <property type="entry name" value="DNA-bd_dom_put_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000551">
        <property type="entry name" value="MerR-type_HTH_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13411">
        <property type="entry name" value="MerR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00422">
        <property type="entry name" value="HTH_MERR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46955">
        <property type="entry name" value="SSF46955"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50937">
        <property type="entry name" value="HTH_MERR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH merR-type" evidence="1">
        <location>
            <begin position="1"/>
            <end position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50937"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77456.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="122" mass="13751" checksum="C708C8BF2C4EAD33" modified="2015-12-09" version="1">MQAKEAAERLGITQRMLRHYEKEGLLEVSRTLNGYRSYSDADLRRAGRIRDFIATGFSTREIRAMSECLSDEGAGPCEGGIEKLTEKLEHIDRLRAELDEKRSAIIDRLAVLKNGLSTLSSH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASU6</accession>
    <name>A0A0M7ASU6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04923</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000035">
        <property type="protein sequence ID" value="CTQ77486.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674066.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000035.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04923"/>
    <dbReference type="EnsemblBacteria" id="CTQ77486">
        <property type="protein sequence ID" value="CTQ77486"/>
        <property type="gene ID" value="LAX5112_04923"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ77486.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="254" mass="28712" checksum="FACFCE130ED61EAD" modified="2015-12-09" version="1">MNISDLYAQRRQVDDFENCDFYHTIDLSPQETVWGHVDLRGREQDYLGACDLDGKSVLEVGPATGHLAFYMEQQGATVTCLELPDTEVGDLVPRTDLANWDQIIADRRRHLDRIVNGFWYCHRKLGSKTNVVYGTVEDLIKAGAKFDIVVLGGVLLHLRDLQLRLQQFAGLAQSELVITEQLLAPLDRSDTAPLVWLAPTKGNGVWDHWWRFGPGYFTGYLPILGLSNLKVSKHEQSCLGSMFKHFTIRAGRNI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AT01</accession>
    <name>A0A0M7AT01_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04947</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000036">
        <property type="protein sequence ID" value="CTQ77546.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77546">
        <property type="protein sequence ID" value="CTQ77546"/>
        <property type="gene ID" value="LAX5112_04947"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="48"/>
            <end position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77546.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="106" mass="11212" checksum="E795D9CDEC24F9F3" modified="2015-12-09" version="1">MRTRLILTILGGAAAVWLMDVGFDLDTSNEASTAILVAGAGKALAQAGPGSVHGTARRTSRRTTRRVARRTSVAGCTPYRAYYNCGGVYYQAVQESGTTVYVVVNP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ATB9</accession>
    <name>A0A0M7ATB9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase</fullName>
            <ecNumber evidence="1">2.4.1.289</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">wbbL_2</name>
        <name evidence="1" type="ORF">LAX5112_04932</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.4.1.289" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000035">
        <property type="protein sequence ID" value="CTQ77510.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04932"/>
    <dbReference type="EnsemblBacteria" id="CTQ77510">
        <property type="protein sequence ID" value="CTQ77510"/>
        <property type="gene ID" value="LAX5112_04932"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102096">
        <property type="term" value="F:decaprenyl-N-acetyl-alpha-D-glucosaminyl-pyrophosphate:dTDP-alpha-L-rhamnose rhamnosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ77510.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="79" mass="9182" checksum="1E329A62F7F61493" modified="2015-12-09" version="1">MLFRGDNYRQLGGFDSRFFLYFEDFDLALRTGKIARIAYVPAVRIVHEGGHAARKGLTHIKLFAKSARLFYKLHGFKLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ATP2</accession>
    <name>A0A0M7ATP2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">UvrABC system protein B</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">uvrB</name>
        <name evidence="13" type="ORF">LAX5112_04984</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage.</text>
    </comment>
    <comment type="subunit">
        <text evidence="8">Forms a heterotetramer with UvrA during the search for lesions. Interacts with UvrC in an incision complex.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the UvrB family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000038">
        <property type="protein sequence ID" value="CTQ77630.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04984"/>
    <dbReference type="EnsemblBacteria" id="CTQ77630">
        <property type="protein sequence ID" value="CTQ77630"/>
        <property type="gene ID" value="LAX5112_04984"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009380">
        <property type="term" value="C:excinuclease repair complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004518">
        <property type="term" value="F:nuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006289">
        <property type="term" value="P:nucleotide-excision repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009432">
        <property type="term" value="P:SOS response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001943">
        <property type="entry name" value="UVR_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036876">
        <property type="entry name" value="UVR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004807">
        <property type="entry name" value="UvrB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024759">
        <property type="entry name" value="UvrB_YAD/RRR_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24029">
        <property type="entry name" value="PTHR24029"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02151">
        <property type="entry name" value="UVR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12344">
        <property type="entry name" value="UvrB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46600">
        <property type="entry name" value="SSF46600"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50151">
        <property type="entry name" value="UVR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0227">DNA damage</keyword>
    <keyword evidence="3" id="KW-0228">DNA excision</keyword>
    <keyword evidence="5" id="KW-0234">DNA repair</keyword>
    <keyword evidence="4" id="KW-0267">Excision nuclease</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0742">SOS response</keyword>
    <feature type="domain" description="Helicase C-terminal" evidence="12">
        <location>
            <begin position="9"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="domain" description="UVR" evidence="11">
        <location>
            <begin position="202"/>
            <end position="237"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="248"/>
            <end position="361"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="10">
        <location>
            <begin position="276"/>
            <end position="299"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008533"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022769"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022881"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023236"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00025647"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00026033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00029504"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50151"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="CTQ77630.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="361" mass="39835" checksum="37C913AF52D98408" modified="2015-12-09" version="1">MEIRPATSQVDDLLGEVREVAQKGYRTLVTTLTKRMAEDLTEYLHENGVRVRYMHSDIDTLERIEILRDLRLGAFDVLVGINLLREGLDIPECALVAILDADKEGFLRSETSLIQTIGRAARNVDGKVILYADNMTGSMERAIAETNRRRDKQLAYNTEHGITPESVKRSIGDIMQSVYEQDHVTVDAGFAEEGSLVGHNLAAHISDLEKQMRDAAADLDFETAARLRDEVKRLQETELAVADDAMARQSNVDQKTGGYQGEKKFGAGGTKAGASGKKKETAKDRAARSKARKPTLDEMTNARTEVPMPKGPLPQKPAPIIAAEDAPHHTPRGKIGVGSYEDPVDEKKRRGRPKKSGRPGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AUU2</accession>
    <name>A0A0M7AUU2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04951</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000036">
        <property type="protein sequence ID" value="CTQ77553.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04951"/>
    <dbReference type="EnsemblBacteria" id="CTQ77553">
        <property type="protein sequence ID" value="CTQ77553"/>
        <property type="gene ID" value="LAX5112_04951"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010297">
        <property type="entry name" value="DUF900_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014586">
        <property type="entry name" value="UCP033909"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05990">
        <property type="entry name" value="DUF900"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF033909">
        <property type="entry name" value="UCP033909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ77553.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="405" mass="44964" checksum="1EE82109AF400C58" modified="2015-12-09" version="1">MNSNYANDAFMARRTQDRPPFTGIFWHRLLRQLLGFGCLFFALAMISGCANRYSTDAFLENNEVQNPGTEHTILVASARALAEDPATLYKGGRSDYVSHAAVTLSVPPNHKSGEIEWPEQFPGDPKRHFTVRNATYLDSKAAFKNAIETELSQRPPEQRNLFVFIHGYNTSFAEATYRLAQLAHDTGYTGVPVLVTWGSSGNTLEYLFDLNSTMIARDGLVETLTTLNETSAREIILMSHSMGSLLLMEGIRQAHLEGGVKDTRKFTQVIIAAPDIDVDLFKAQMRRIGKPDRPFIILVSRDDVALRLSRKISGGVSRVGAYENDKELSELGAIVVDVTELSARDPARHGRYADAGDFAPLVREMLKDRGIEMAGLQFDSSNDRSRPLEPLIDRGLGIVITSPDR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZN90</accession>
    <name>A0A0M6ZN90_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Probable multidrug resistance protein NorM</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">mepA_1</name>
        <name evidence="4" type="ORF">LAX5112_00034</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Multidrug efflux pump.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63692.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00034"/>
    <dbReference type="EnsemblBacteria" id="CTQ63692">
        <property type="protein sequence ID" value="CTQ63692"/>
        <property type="gene ID" value="LAX5112_00034"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015297">
        <property type="term" value="F:antiporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042910">
        <property type="term" value="F:xenobiotic transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002528">
        <property type="entry name" value="MATE_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01554">
        <property type="entry name" value="MatE"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006603">
        <property type="entry name" value="DinF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00797">
        <property type="entry name" value="matE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="21"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="56"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="97"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="139"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="172"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="197"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="239"/>
            <end position="260"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="272"/>
            <end position="299"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="319"/>
            <end position="337"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="349"/>
            <end position="372"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="393"/>
            <end position="411"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="417"/>
            <end position="439"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003408"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00020268"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ63692.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="469" mass="49222" checksum="B1DA892D60C8DF26" modified="2015-12-09" version="1">MSVLMSQAKFLSGNLFRHVTVMSLTSSVGLMAIFAVDFVDMIFISMLGKDELAAAVGYAGAILFFTTSFNIGVAIAAGALVARALGEGDKGHARSRASAALGWGVLFCIAFATLVWFGLDFLVSLIGATGATHGLAVDYLSIIVPTLPFLLLGMAGGAILRAHGDARRAMSCTIIAGLVNAVLDPILIFGFDLELTGAALASAASRIALAVFAIWPIFKYYGGLSLPGKSAFMKALPPIAAIAVPAILTQLATPVGQAFVTRSMAEFGEDAVAGMAVVARMSPLAFATIFALSGAVGPIVGQNYGAGAYTRVRTVLRDALLFTALVVAFAALVLFLLREPIAALFQVQGVALTLIYLFCGPLALAFFFNGALFVSNAFFNNLGRPFYSTWMNWGRHTLGTIPLVMICGSIWGAPGVLIGQAAGGVVFGVAAIFLVRSVIRTVETGEGRPEGPSIFQRQARQVILFFNRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZNP6</accession>
    <name>A0A0M6ZNP6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">GDP-mannose-dependent alpha-mannosyltransferase</fullName>
            <ecNumber evidence="2">2.4.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">mgtA_1</name>
        <name evidence="2" type="ORF">LAX5112_00276</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.4.1.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64378.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670256.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00276"/>
    <dbReference type="EnsemblBacteria" id="CTQ64378">
        <property type="protein sequence ID" value="CTQ64378"/>
        <property type="gene ID" value="LAX5112_00276"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016757">
        <property type="term" value="F:glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028098">
        <property type="entry name" value="Glyco_trans_4-like_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13439">
        <property type="entry name" value="Glyco_transf_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glyco_trans_4-like_N" evidence="1">
        <location>
            <begin position="15"/>
            <end position="166"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13439"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64378.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="345" mass="38083" checksum="BB2A77FBB5AADFE1" modified="2015-12-09" version="1">MKSLLFVSDAWRPQVNGVVRTLEYTAQELEKRGIRVEYLTPNGFTTIPCPTYPEIRLALTTRGRVGQHIKDFDCDHIHIATEGPLGLLAAKVARKENRSFTTSYHTRFPEYVAARVPLPKTPFYAWFRRFHNSASGCMVATDELETSLRDRNFKNLMRWSRGVDTNIFKPYEGSVLPADLPRPIFMNVGRVAVEKNISAFLDLDLPGSKVVVGDGPQLETLKRDYPDVHFTGSKTGEDLAQHYASADAFVFPSRTDTFGLVLLEALACGVPVAAYPVMGPVDVIGDSGAGILSDDLREAALAALDIPRDVCRSTALSQSWAVCTDQFLENAATADAMHRRSGSDV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZNY7</accession>
    <name>A0A0M6ZNY7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00103</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63886.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ63886">
        <property type="protein sequence ID" value="CTQ63886"/>
        <property type="gene ID" value="LAX5112_00103"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ63886.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="46" mass="5311" checksum="FF27AE5C60B0207D" modified="2015-12-09" version="1">MAAQNANMSSFASLAAHYVIIRFYSLKLRPLRKDVKRRKVRSDAVM</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQ29</accession>
    <name>A0A0M6ZQ29_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Peptidyl-tRNA hydrolase YaeJ</fullName>
            <ecNumber evidence="3">3.1.1.29</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yaeJ</name>
        <name evidence="3" type="ORF">LAX5112_00263</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.1.29" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64341.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670246.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00263"/>
    <dbReference type="EnsemblBacteria" id="CTQ64341">
        <property type="protein sequence ID" value="CTQ64341"/>
        <property type="gene ID" value="LAX5112_00263"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004045">
        <property type="term" value="F:aminoacyl-tRNA hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003747">
        <property type="term" value="F:translation release factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000352">
        <property type="entry name" value="Pep_chain_release_fac_I"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00472">
        <property type="entry name" value="RF-1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00745">
        <property type="entry name" value="RF_PROK_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RF_PROK_I" evidence="2">
        <location>
            <begin position="33"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="109"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="109"/>
            <end position="130"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS00745"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ64341.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="153" mass="17316" checksum="84AFF85EC9AAB8CB" modified="2015-12-09" version="1">MSGDEEEPAPSSRIPVIGRLYITRDDLNEEFIRASGPGGQNVNKVSTAVQLRFNLWANQTLPQDVKSRAAKIAGSRLTQYGEIILQADRHRTRERNREDALARLIDLLKRATEKPKPRKATKPTLGSKRRRLDAKKQRGQVKKLRGRSSGFED</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQR0</accession>
    <name>A0A0M6ZQR0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Ribose import ATP-binding protein RbsA</fullName>
            <ecNumber evidence="6">3.6.3.17</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">rbsA_1</name>
        <name evidence="6" type="ORF">LAX5112_00302</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.17" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64450.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00302"/>
    <dbReference type="EnsemblBacteria" id="CTQ64450">
        <property type="protein sequence ID" value="CTQ64450"/>
        <property type="gene ID" value="LAX5112_00302"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="25"/>
            <end position="256"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="274"/>
            <end position="520"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="57"/>
            <end position="64"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ64450.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="527" mass="56271" checksum="063C1132707E71FD" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZR66</accession>
    <name>A0A0M6ZR66_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DUF6460 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_00378</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64721.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ64721">
        <property type="protein sequence ID" value="CTQ64721"/>
        <property type="gene ID" value="LAX5112_00378"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045594">
        <property type="entry name" value="DUF6460"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20061">
        <property type="entry name" value="DUF6460"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="73"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="domain" description="DUF6460" evidence="2">
        <location>
            <begin position="62"/>
            <end position="96"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF20061"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ64721.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="99" mass="11070" checksum="FF4901A8014272AC" modified="2015-12-09" version="1">MVCNSLTVKRRLPTKDSGALYQFLSTLFKIAVISLLVGAGLSFINITAEDVLGSVGLSPIQLWIYMLEFRDWAIPNMILGAFIVVPVWLVIYLFRPPRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRA7</accession>
    <name>A0A0M6ZRA7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">3-oxoacyl-[acyl-carrier-protein] reductase FabG</fullName>
            <ecNumber evidence="1">1.1.1.100</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">fabG_1</name>
        <name evidence="1" type="ORF">LAX5112_00581</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.1.1.100" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65305.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670510.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00581"/>
    <dbReference type="EnsemblBacteria" id="CTQ65305">
        <property type="protein sequence ID" value="CTQ65305"/>
        <property type="gene ID" value="LAX5112_00581"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004316">
        <property type="term" value="F:3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ65305.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="252" mass="27251" checksum="FEA55316799C8A20" modified="2015-12-09" version="1">MSNGKPIDERRTLVLTGASRGIGHATVKKFSAENWRVITCSRQAFSDKCPWPMGPEDHIQVDLSDPENMGFAIQEIRKRLEPNGSRLHALVNNAGISPKGNGGERLNSLNTPMHEWRNVFQVNFFGPILLARGLFSELKAATGSVVNVTSIAGGRVHPFAGTAYATSKAALASLTREMASDFGPHGVRVNAIAPGEIDTSILSPGTEDMIEDIPLRRLGQPNEVAETIYYLCSETSSYVTGSEIHINGGQHV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRF9</accession>
    <name>A0A0M6ZRF9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Exosortase A system-associated hydrolase 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00149</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64013.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670169.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00149"/>
    <dbReference type="EnsemblBacteria" id="CTQ64013">
        <property type="protein sequence ID" value="CTQ64013"/>
        <property type="gene ID" value="LAX5112_00149"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000383">
        <property type="entry name" value="Xaa-Pro-like_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02129">
        <property type="entry name" value="Peptidase_S15"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidase_S15" evidence="1">
        <location>
            <begin position="29"/>
            <end position="138"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02129"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64013.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="222" mass="24667" checksum="79FB0E3091FEF891" modified="2015-12-09" version="1">MPEVIFNGPAGRLEGRFHPAKKRNAPIALVLHLHPQFGGTMNNQIVYQMYYMFARRGFAVLRFNFRGVGRSQGTFDHGQGELSDAAAALDWVQTVHPDARACWIAGFSFGAWIGMQLLMRRPEVEGFISVAPPANLHDFSFLAPCPSSGLIIHGEQDKVVPQKDVQTLVDKLKTQKGIVIDHQTIPGANHFFENDMDTLIENCGDYVDGRLGLTPTDYVDID</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRZ7</accession>
    <name>A0A0M6ZRZ7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Mrp complex subunit C1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">mnhC1</name>
        <name evidence="6" type="ORF">LAX5112_00467</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64976.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670422.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00467"/>
    <dbReference type="EnsemblBacteria" id="CTQ64976">
        <property type="protein sequence ID" value="CTQ64976"/>
        <property type="gene ID" value="LAX5112_00467"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039428">
        <property type="entry name" value="NUOK/Mnh_C1-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00420">
        <property type="entry name" value="Oxidored_q2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="6"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="28"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="75"/>
            <end position="96"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ64976.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="129" mass="13288" checksum="5A50719915317F94" modified="2015-12-09" version="1">MIYVYAATIAIVAGAGIYMILAQNIVRIILGVALLAASANLLIFLSGRLGSVTPPIIRQDAEVLGSYAANPLPQALVLTAIVIGFALTAYAVALAVKGYKSLGTLDTSQMHDAEDLGSPFTAKSAPKQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZS52</accession>
    <name>A0A0M6ZS52_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Peptide deformylase</fullName>
            <shortName evidence="2">PDF</shortName>
            <ecNumber evidence="2">3.5.1.88</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="2">Polypeptide deformylase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="2 3" type="primary">def</name>
        <name evidence="3" type="ORF">LAX5112_00530</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>H2O + N-terminal N-formyl-L-methionyl-[peptide] = formate + N-terminal L-methionyl-[peptide]</text>
            <dbReference type="Rhea" id="RHEA:24420"/>
            <dbReference type="Rhea" id="RHEA-COMP:10639"/>
            <dbReference type="Rhea" id="RHEA-COMP:10640"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15740"/>
            <dbReference type="ChEBI" id="CHEBI:49298"/>
            <dbReference type="ChEBI" id="CHEBI:64731"/>
            <dbReference type="EC" id="3.5.1.88"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Fe(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29033"/>
        </cofactor>
        <text evidence="2">Binds 1 Fe(2+) ion.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the polypeptide deformylase family.</text>
    </comment>
    <dbReference type="EC" id="3.5.1.88" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65157.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670474.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00530"/>
    <dbReference type="EnsemblBacteria" id="CTQ65157">
        <property type="protein sequence ID" value="CTQ65157"/>
        <property type="gene ID" value="LAX5112_00530"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042586">
        <property type="term" value="F:peptide deformylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00487">
        <property type="entry name" value="Pep_deformylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.45.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00163">
        <property type="entry name" value="Pep_deformylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023635">
        <property type="entry name" value="Peptide_deformylase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036821">
        <property type="entry name" value="Peptide_deformylase_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10458">
        <property type="entry name" value="PTHR10458"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01327">
        <property type="entry name" value="Pep_deformylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004749">
        <property type="entry name" value="Pep_def"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01576">
        <property type="entry name" value="PDEFORMYLASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56420">
        <property type="entry name" value="SSF56420"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00079">
        <property type="entry name" value="pept_deformyl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0408">Iron</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" evidence="2">
        <location>
            <position position="137"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="94"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="136"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="140"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010759"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ65157.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="172" mass="19260" checksum="3214D8ABA987EF39" modified="2015-12-09" version="1">MTKRPIITIPDPVLREVCAPIEKVDAETIALADDMLETMYDAPGIGLAASQVGILKRIFVLDVAKEDAPKEPMVFINPEIIWSGDELSVYQEGCLSIPDYYEDVERPAEVAVKFMDREGAEQEIKADGLLATCIQHELDHLNGKLFIDYLSKLKRDRVIKKFTKQAKLAGQL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSA1</accession>
    <name>A0A0M6ZSA1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative integral membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00525</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65142.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008189851.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00525"/>
    <dbReference type="EnsemblBacteria" id="CTQ65142">
        <property type="protein sequence ID" value="CTQ65142"/>
        <property type="gene ID" value="LAX5112_00525"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018692">
        <property type="entry name" value="DUF2189"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09955">
        <property type="entry name" value="DUF2189"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="41"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="69"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="120"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="166"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="201"/>
            <end position="224"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="230"/>
            <end position="248"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65142.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="276" mass="30067" checksum="125F73F0CABE0142" modified="2015-12-09" version="1">MSEQELASNELRPMPQVNKITANDVIDALAAGMADFRRAPVYGITIGAIFAAGGLFVVLSAAALKMSYLSYPAAAGFVLLGPFAAVGLYEVSRRLQSGEELSWSKILGTMWAQKGRELSWMAFVVLFIQIMWMYQVRLLLALFLGFRSFASFEEFLTEIVSTPEGLMFLAVGHVVGAILSLILFSLTVISFPLLLEEDRDFITAMITSVRAVVTSPVPMIGWAFAVTATLIVSMAPGFLGLIITLPILGHTTWHLYKKCVVMPEEPASSVQTQSST</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSD3</accession>
    <name>A0A0M6ZSD3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">2-hydroxy-3-oxopropionate reductase</fullName>
            <ecNumber evidence="4">1.1.1.60</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">glxR</name>
        <name evidence="4" type="ORF">LAX5112_00476</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.1.1.60" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65000.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670428.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00476"/>
    <dbReference type="EnsemblBacteria" id="CTQ65000">
        <property type="protein sequence ID" value="CTQ65000"/>
        <property type="gene ID" value="LAX5112_00476"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008679">
        <property type="term" value="F:2-hydroxy-3-oxopropionate reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050661">
        <property type="term" value="F:NADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016054">
        <property type="term" value="P:organic acid catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1040.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008927">
        <property type="entry name" value="6-PGluconate_DH-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013328">
        <property type="entry name" value="6PGD_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006115">
        <property type="entry name" value="6PGDH_NADP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015815">
        <property type="entry name" value="HIBADH-related"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029154">
        <property type="entry name" value="NADP-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14833">
        <property type="entry name" value="NAD_binding_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03446">
        <property type="entry name" value="NAD_binding_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000103">
        <property type="entry name" value="HIBADH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48179">
        <property type="entry name" value="SSF48179"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NAD_binding_2" evidence="2">
        <location>
            <begin position="2"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="domain" description="NAD_binding_11" evidence="3">
        <location>
            <begin position="165"/>
            <end position="285"/>
        </location>
    </feature>
    <feature type="active site" evidence="1">
        <location>
            <position position="171"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRSR" id="PIRSR000103-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF03446"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF14833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ65000.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="291" mass="30260" checksum="0BA6FB5315A6A8E5" modified="2015-12-09" version="1">MKIGFAGLGRMGARMAANLVVAGHEMRVWNRTASKADVFARDHGAKRAASPRDLAEKCDVVISMLADDSAVADVYFDPDSGLLAGAGSPVVAEMGTVSVPAANRLFEAASSCGKRFVDAPVSGATKAAEDAQLLIMAGSDAAYAQELGPVFSVLGKRTIWLGGPGKGAAMKLGVNMLIHGLNQTLSEALALMTSAGIAPETAYEVIENSAAAAPVIHYRKGQYLDEAAHDVTFTVALARKDVSLALDLARSVGVTMPQADLNRSVLSAAGEAGYDARDMASIYAFVKRELS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSP2</accession>
    <name>A0A0M6ZSP2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Sulfoacetaldehyde acetyltransferase</fullName>
            <ecNumber evidence="4">2.3.3.15</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">xsc_2</name>
        <name evidence="11" type="ORF">LAX5112_00735</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>thiamine diphosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58937"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="3 6">Belongs to the TPP enzyme family.</text>
    </comment>
    <dbReference type="EC" id="2.3.3.15" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65728.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040450961.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00735"/>
    <dbReference type="EnsemblBacteria" id="CTQ65728">
        <property type="protein sequence ID" value="CTQ65728"/>
        <property type="gene ID" value="LAX5112_00735"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050487">
        <property type="term" value="F:sulfoacetaldehyde acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030976">
        <property type="term" value="F:thiamine pyrophosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019529">
        <property type="term" value="P:taurine catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029035">
        <property type="entry name" value="DHS-like_NAD/FAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017820">
        <property type="entry name" value="Sulphoacetald_Actrfrase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029061">
        <property type="entry name" value="THDP-binding"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012000">
        <property type="entry name" value="Thiamin_PyroP_enz_cen_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012001">
        <property type="entry name" value="Thiamin_PyroP_enz_TPP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000399">
        <property type="entry name" value="TPP-bd_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045229">
        <property type="entry name" value="TPP_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011766">
        <property type="entry name" value="TPP_enzyme-bd_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18968">
        <property type="entry name" value="PTHR18968"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02775">
        <property type="entry name" value="TPP_enzyme_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00205">
        <property type="entry name" value="TPP_enzyme_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02776">
        <property type="entry name" value="TPP_enzyme_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52467">
        <property type="entry name" value="SSF52467"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52518">
        <property type="entry name" value="SSF52518"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03457">
        <property type="entry name" value="sulphoacet_xsc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00187">
        <property type="entry name" value="TPP_ENZYMES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 11" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0786">Thiamine pyrophosphate</keyword>
    <keyword evidence="11" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="TPP_enzyme_N" evidence="10">
        <location>
            <begin position="3"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="domain" description="TPP_enzyme_M" evidence="8">
        <location>
            <begin position="187"/>
            <end position="324"/>
        </location>
    </feature>
    <feature type="domain" description="TPP_enzyme_C" evidence="9">
        <location>
            <begin position="404"/>
            <end position="557"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="330"/>
            <end position="371"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="334"/>
            <end position="348"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="356"/>
            <end position="371"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001964"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007812"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012971"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU362132"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00205"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF02775"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF02776"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ65728.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="589" mass="63663" checksum="5619ACA8C34A2FD8" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZT88</accession>
    <name>A0A0M6ZT88_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Gcv operon activator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">gcvA_4</name>
        <name evidence="3" type="ORF">LAX5112_00828</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65985.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670734.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00828"/>
    <dbReference type="EnsemblBacteria" id="CTQ65985">
        <property type="protein sequence ID" value="CTQ65985"/>
        <property type="gene ID" value="LAX5112_00828"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00039">
        <property type="entry name" value="HTHLYSR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="5"/>
            <end position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ65985.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="291" mass="32007" checksum="0E02CBE7E9F3B044" modified="2015-12-09" version="1">MSILPNLMWLRSFETTARLGSFTAAADDLGLTQAAVSTHIRNLESQLGHALFLRSTRKLALTEIGKAYLPSVRKAIDELSLSTAGLFGARQSGTVTLRAPISTTVLVVAPQLPAFLEEHPAIKVRLLSAIWAETVLETEVDIDIRLGIGKWPDGHADLLAKDTIIPICSPRLAKSIDTPEALLETPLIHILGFEDHWDRYFEECGLERPKGQRRVTVDTTLAAVELAAAGAGVALILERAAIRLEEAGRLKIPLDIRIPLGQDHYLVERDHSARTRPEVETVTDWLRTILT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZU79</accession>
    <name>A0A0M6ZU79_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Ribose import ATP-binding protein RbsA</fullName>
            <ecNumber evidence="6">3.6.3.17</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">rbsA_2</name>
        <name evidence="6" type="ORF">LAX5112_00477</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.17" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65003.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670429.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00477"/>
    <dbReference type="EnsemblBacteria" id="CTQ65003">
        <property type="protein sequence ID" value="CTQ65003"/>
        <property type="gene ID" value="LAX5112_00477"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="8"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="251"/>
            <end position="498"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="40"/>
            <end position="47"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ65003.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="503" mass="54853" checksum="74128A78A03F02D2" modified="2015-12-09" version="1">MSQSTPALRLENIVKTFPGVRALDGVSLEVLPGEVHALMGENGAGKSTLMKVLGGLHQPDEGRIIVSEQPVRMASPLDAKSKGIVFIHQELSLASELTVAENIYLGELPKKRFGLVDWQKLYAQTDEILSKLKVGFNAKTRVGDLSIANQQMVEIARALTVDAKAVIFDEPTASLTDAEKVVLFDVIADLKDHGVGIIYISHRMEEIFKITDRISVLRDGSYRGTLVTAETNEDEITQLMIGRSLDLSRNVNHNELGDTALEVKGLSCGKLYRDISFEVRRGEVVGFYGLVGAGRTEIAETLFGLREPSAGKILLDGQETRIHSPADAISKGISLVPEDRKGQGLVLGMNCRDNMTLPQVDDLKAGPFVAEGAEVAIFDQYRDRLDIRTPGWKQTVGNLSGGNQQKIVIGKWLSMHPNVLIVDEPTRGIDVGSKSEIHNLIRELAGHGYAVIVISSEMPEVLHVSDRIVAMYSGEIIRTFTSDQVTEDNLIQAISGITPDKAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUA6</accession>
    <name>A0A0M6ZUA6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Inositol 2-dehydrogenase</fullName>
            <ecNumber evidence="2">1.1.1.18</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">iolG</name>
        <name evidence="2" type="ORF">LAX5112_00712</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.1.1.18" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65660.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00712"/>
    <dbReference type="EnsemblBacteria" id="CTQ65660">
        <property type="protein sequence ID" value="CTQ65660"/>
        <property type="gene ID" value="LAX5112_00712"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050112">
        <property type="term" value="F:inositol 2-dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000683">
        <property type="entry name" value="Gfo/Idh/MocA-like_OxRdtase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01408">
        <property type="entry name" value="GFO_IDH_MocA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GFO_IDH_MocA" evidence="1">
        <location>
            <begin position="2"/>
            <end position="117"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01408"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65660.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="342" mass="37042" checksum="22A94CA2D51845B3" modified="2015-12-09" version="1">MIRAVIAGLGNMGLSHALALHKDPGVQIVGLVNRSPVALPEELQPYPRLNSFSEGLELKPDLVVIATYSDSHADYACAAMDAGAHVFVEKPLATTVSDAERVVAKANETGRKLVVGYILRHHPSWVRLIEEARGLGGPFVFRLNLNQQSSGAEWETHKALMQNTSPIVDCGVHYVDVMCQITDGKPLRVHGMGVRLSDEIAEDMYNYGQFQVVFDDGSVGWYEAGWGPMMSETAFFVKDIVSPNGSVSITDGNKGASADIDGHTKVGSILVHRPDGDESIDLPDEPGHQELCDAEQAYMVRAITENIDLTRHMQDAVQSLAICLAADESIRIGQPITLGTAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUE1</accession>
    <name>A0A0M6ZUE1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Lipase</fullName>
            <ecNumber evidence="1">3.1.1.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00957</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.1.3" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66409.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670877.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ66409">
        <property type="protein sequence ID" value="CTQ66409"/>
        <property type="gene ID" value="LAX5112_00957"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004806">
        <property type="term" value="F:triglyceride lipase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.150.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018511">
        <property type="entry name" value="Hemolysin-typ_Ca-bd_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001343">
        <property type="entry name" value="Hemolysn_Ca-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011049">
        <property type="entry name" value="Serralysin-like_metalloprot_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00353">
        <property type="entry name" value="HemolysinCabind"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51120">
        <property type="entry name" value="SSF51120"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00330">
        <property type="entry name" value="HEMOLYSIN_CALCIUM"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ66409.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="484" mass="51394" checksum="E8FEFDFFF5BCBED8" modified="2015-12-09" version="1">MGFFEYKGQEALGLVSHARDLMIYSYHGIEDILQPGNSEEAARQEIEAKGWTVLTPDDLGIPAADIDRNGTFQGETTQFKDAQADVLARFDETGAITQIGLAFRGTTGTIDNIISDTVGDVIDYLEFLSADPNYAFGAFPELMGAIKTLLESNGLTAADLIVTGHSLGGGAVTNMAERSDDFFDGFYKNADYIGFAAHYTPEDGATVLDSGAEVLSVDIENDPVPSVISEGHINLFGNDTDYEYETSNLVLFNDFYATPAYWDGGNITNLIAWTAHLPSNYEQVVEAIAGSEFYTEMSRDSVVIVSDLSDLTRGVVWVEDINPLFDPTGHQGDDAFILGSNKDDLLAGKSGKDAIEGFAGDDHLKGEGGADRLIGGAGNDTLEGGAGDDVIVGGAGADTLYGGAGADIFVFASGDGADEIEDFEVGIDKIDVSGAGVTQFSDLSITANGWWTDVRIAFGGETLRLDTGWRPSLPDLTAGDFLFA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUE5</accession>
    <name>A0A0M6ZUE5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Carbon starvation induced regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">csiR_2</name>
        <name evidence="5" type="ORF">LAX5112_00802</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65917.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670717.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00802"/>
    <dbReference type="EnsemblBacteria" id="CTQ65917">
        <property type="protein sequence ID" value="CTQ65917"/>
        <property type="gene ID" value="LAX5112_00802"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.530">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011711">
        <property type="entry name" value="GntR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008920">
        <property type="entry name" value="TF_FadR/GntR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000524">
        <property type="entry name" value="Tscrpt_reg_HTH_GntR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07729">
        <property type="entry name" value="FCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00392">
        <property type="entry name" value="GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00895">
        <property type="entry name" value="FCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00345">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48008">
        <property type="entry name" value="SSF48008"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50949">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH gntR-type" evidence="4">
        <location>
            <begin position="13"/>
            <end position="80"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ65917.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="226" mass="26000" checksum="3221265B45F95B88" modified="2015-12-09" version="1">MIIQSHIDPAQEPSATQRAYLAVRQMILTGEIPPGEKLKIENLRKKLDMGGSPIREALTLLVSDLLVERLDQRGFRSAEVGRENFAEILKLRCHLEEMALRESIAHANQVWEDNLVISHHRMMREPRNNVERFEDLHKTFHMNLLAACTSKVLLKFCNQLYDLNIRYRYLAGKALDYSTRDIGSEHTAIMNAAVDRDTETACHLLLDHYQRTGAFLERLFTSEAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUR3</accession>
    <name>A0A0M6ZUR3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Aldehyde oxidoreductase</fullName>
            <ecNumber evidence="2">1.2.99.7</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">mop_2</name>
        <name evidence="2" type="ORF">LAX5112_00761</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.2.99.7" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65800.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00761"/>
    <dbReference type="EnsemblBacteria" id="CTQ65800">
        <property type="protein sequence ID" value="CTQ65800"/>
        <property type="gene ID" value="LAX5112_00761"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033727">
        <property type="term" value="F:aldehyde dehydrogenase (FAD-independent) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030151">
        <property type="term" value="F:molybdenum ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000674">
        <property type="entry name" value="Ald_Oxase/Xan_DH_a/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036856">
        <property type="entry name" value="Ald_Oxase/Xan_DH_a/b_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016208">
        <property type="entry name" value="Ald_Oxase/xanthine_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008274">
        <property type="entry name" value="AldOxase/xan_DH_Mopterin-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037165">
        <property type="entry name" value="AldOxase/xan_DH_Mopterin-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014309">
        <property type="entry name" value="Xanthine_DH_Mopterin-bd_su"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11908">
        <property type="entry name" value="PTHR11908"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01315">
        <property type="entry name" value="Ald_Xan_dh_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02738">
        <property type="entry name" value="Ald_Xan_dh_C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01008">
        <property type="entry name" value="Ald_Xan_dh_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54665">
        <property type="entry name" value="SSF54665"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56003">
        <property type="entry name" value="SSF56003"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02965">
        <property type="entry name" value="xanthine_xdhB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ald_Xan_dh_C" evidence="1">
        <location>
            <begin position="50"/>
            <end position="158"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM01008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65800.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="799" mass="87230" checksum="B8F489B8AFF18618" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZV99</accession>
    <name>A0A0M6ZV99_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">3-hydroxyisobutyrate dehydrogenase</fullName>
            <shortName evidence="5">HIBADH</shortName>
            <ecNumber evidence="5">1.1.1.31</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">mmsB</name>
        <name evidence="8" type="ORF">LAX5112_01047</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>3-hydroxy-2-methylpropanoate + NAD(+) = 2-methyl-3-oxopropanoate + H(+) + NADH</text>
            <dbReference type="Rhea" id="RHEA:17681"/>
            <dbReference type="ChEBI" id="CHEBI:11805"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57700"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="EC" id="1.1.1.31"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="5">Amino-acid degradation; L-valine degradation.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the HIBADH-related family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.31" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66658.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670932.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01047"/>
    <dbReference type="EnsemblBacteria" id="CTQ66658">
        <property type="protein sequence ID" value="CTQ66658"/>
        <property type="gene ID" value="LAX5112_01047"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00362"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008442">
        <property type="term" value="F:3-hydroxyisobutyrate dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050661">
        <property type="term" value="F:NADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006574">
        <property type="term" value="P:valine catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1040.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002204">
        <property type="entry name" value="3-OH-isobutyrate_DH-rel_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008927">
        <property type="entry name" value="6-PGluconate_DH-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013328">
        <property type="entry name" value="6PGD_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006115">
        <property type="entry name" value="6PGDH_NADP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011548">
        <property type="entry name" value="HIBADH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015815">
        <property type="entry name" value="HIBADH-related"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029154">
        <property type="entry name" value="NADP-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14833">
        <property type="entry name" value="NAD_binding_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03446">
        <property type="entry name" value="NAD_binding_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000103">
        <property type="entry name" value="HIBADH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48179">
        <property type="entry name" value="SSF48179"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01692">
        <property type="entry name" value="HIBADH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00895">
        <property type="entry name" value="3_HYDROXYISOBUT_DH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 5" id="KW-0101">Branched-chain amino acid catabolism</keyword>
    <keyword evidence="5" id="KW-0520">NAD</keyword>
    <keyword evidence="3 5 8" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NAD_binding_2" evidence="6">
        <location>
            <begin position="4"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="domain" description="NAD_binding_11" evidence="7">
        <location>
            <begin position="166"/>
            <end position="293"/>
        </location>
    </feature>
    <feature type="active site" evidence="4">
        <location>
            <position position="172"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009080"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022456"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR000103-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU910714"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF03446"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF14833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ66658.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="296" mass="29669" checksum="6FF67FD9F1FF6479" modified="2015-12-09" version="1">MATTVGFIGLGNMGGPMAINLAKAGHRVLGFDMSKAAIDALVAEGGEAAADVAQLAAEADVIVSMLPAGKHVRQVYMGEGGILDSANAGTLLIDSSTIDVDSARAVSAAAAGKSMPMVDAPVSGGVAGAAGGTLTFMVGGEDSAFEAAKPYLDIMGKTIVHAGGAGTGQAAKICNNMILGISMIGVSEAFVLAERLGLDAQKLFDISSTASGQCWSLTSYCPVPGPLPTSPANRDYQPGFAAGMMLKDLKLAQEAAHSSGAATPMGAEAASLYSLFCNQGGESLDFSAIVKFLRGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVT2</accession>
    <name>A0A0M6ZVT2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">PF03932 family protein CutC</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2 3" type="primary">cutC</name>
        <name evidence="3" type="ORF">LAX5112_00703</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the CutC family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">Once thought to be involved in copper homeostasis, experiments in E.coli have shown this is not the case.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65634.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670642.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00703"/>
    <dbReference type="EnsemblBacteria" id="CTQ65634">
        <property type="protein sequence ID" value="CTQ65634"/>
        <property type="gene ID" value="LAX5112_00703"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.380">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00795">
        <property type="entry name" value="CutC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005627">
        <property type="entry name" value="Cu_homeostasis_CutC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036822">
        <property type="entry name" value="CutC_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12598">
        <property type="entry name" value="PTHR12598"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03932">
        <property type="entry name" value="CutC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF110395">
        <property type="entry name" value="SSF110395"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007768"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00795"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ65634.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="238" mass="24784" checksum="0B2701F5F5DA3720" modified="2015-12-09" version="1">MLLEVCVDTMEGAWAAVRGGAGRIELCSALSEGGLTPSAGLMRAAAKLPVPVYAMIRPRAGHFRFSEAEEEIMASDIKLAKDFGLSGVVLGAQHGDHTLDRDMLARLSDRAAGLGRTLHRVIDVVPDPFAALETAIDLGFERVLTSGGQATANAGQAVIREMAATADFRIGIMPGAGLRPDLVANIIQSTGVTEVHASCSVIVIDEDADGLFCPPGGCRKTSEDLVKQMVAAIGNSGC</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWJ6</accession>
    <name>A0A0M6ZWJ6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Transcription antitermination protein NusB</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Antitermination factor NusB</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6 9" type="primary">nusB</name>
        <name evidence="9" type="ORF">LAX5112_01034</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the NusB family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66621.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670924.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01034"/>
    <dbReference type="EnsemblBacteria" id="CTQ66621">
        <property type="protein sequence ID" value="CTQ66621"/>
        <property type="gene ID" value="LAX5112_01034"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006353">
        <property type="term" value="P:DNA-templated transcription, termination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031564">
        <property type="term" value="P:transcription antitermination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.940.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00073">
        <property type="entry name" value="NusB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035926">
        <property type="entry name" value="NusB-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011605">
        <property type="entry name" value="NusB_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006027">
        <property type="entry name" value="NusB_RsmB_TIM44"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11078">
        <property type="entry name" value="PTHR11078"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01029">
        <property type="entry name" value="NusB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48013">
        <property type="entry name" value="SSF48013"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01951">
        <property type="entry name" value="nusB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="5 6" id="KW-0804">Transcription</keyword>
    <keyword evidence="2 6" id="KW-0889">Transcription antitermination</keyword>
    <keyword evidence="4 6" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="NusB" evidence="8">
        <location>
            <begin position="28"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005952"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022814"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF01029"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ66621.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="177" mass="19792" checksum="75DF7AF3E845FAB3" modified="2015-12-09" version="1">MTGKADPDKPARQKSDNASRPANKRGVARLAAVQALYQMDIGGAPLTNVVSEYTAFRLGKEIDGEQYRDADEQWFKHILAGVVADQKFLDPYIHTALKEDWPLKRIDSLLRAILRAGGYELLRRRDVPAKVIISEYIDVAKAFFEDDEPGLVNGVLDRLAHELRSPEFDVKDADGQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZX04</accession>
    <name>A0A0M6ZX04_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Tripartite tricarboxylate transporter TctB family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00860</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66074.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008196290.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00860"/>
    <dbReference type="EnsemblBacteria" id="CTQ66074">
        <property type="protein sequence ID" value="CTQ66074"/>
        <property type="gene ID" value="LAX5112_00860"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009936">
        <property type="entry name" value="DUF1468"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07331">
        <property type="entry name" value="TctB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="44"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="83"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="106"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="127"/>
            <end position="145"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66074.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="164" mass="18234" checksum="A8EF766AA394EE45" modified="2015-12-09" version="1">MALDRWIAMIILLICLAYGYAAFFTMDDTLAPFMRRNPIWPSTFPKILSVMAIICSLLILLGFEKSSGEPKPTEINYRRLTDYKLGQAIALLGLMVAYALLLRPAGFLFSTFGFLFIGSFILGERKFIVMALTSAIAAGVVWYLVDRVLGIFLSPLPFFMANGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZX26</accession>
    <name>A0A0M6ZX26_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic</fullName>
            <ecNumber evidence="4">1.3.1.75</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_00867</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>NADP(+) + protochlorophyllide a = 3,8-divinyl protochlorophyllide a + H(+) + NADPH</text>
            <dbReference type="Rhea" id="RHEA:48884"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="ChEBI" id="CHEBI:58632"/>
            <dbReference type="ChEBI" id="CHEBI:83350"/>
            <dbReference type="EC" id="1.3.1.75"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Porphyrin-containing compound metabolism; chlorophyll biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Plastid</location>
            <location evidence="1">Chloroplast</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EC" id="1.3.1.75" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66094.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00867"/>
    <dbReference type="EnsemblBacteria" id="CTQ66094">
        <property type="protein sequence ID" value="CTQ66094"/>
        <property type="gene ID" value="LAX5112_00867"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00668"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033728">
        <property type="term" value="F:divinyl chlorophyllide a 8-vinyl-reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015995">
        <property type="term" value="P:chlorophyll biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044201">
        <property type="entry name" value="DVR-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016040">
        <property type="entry name" value="NAD(P)-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47378">
        <property type="entry name" value="PTHR47378"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13460">
        <property type="entry name" value="NAD_binding_10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NAD(P)-bd_dom" evidence="6">
        <location>
            <begin position="30"/>
            <end position="220"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005173"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023990"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00024059"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00024089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF13460"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ66094.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="349" mass="38367" checksum="4F9B841851D79435" modified="2015-12-09" version="1">MEAGGPETKGSTNPIEPNGDVRAKRILLFGATGTIGRATLNELLRQGHHVVCFVRPQAAAKIQRFAPETVVRTGYVTNPQSIRQDAFRGDEFDAVISCLSSRTGIPDDAWKIDHQANSDILKIAKETGKPHFILLSAICVQRPRLAFQHAKLAFEAELQASGLPYSIIRPTAFFKSLSGQVERVKAGKPFLIFGDGTLTSCKPISDHDVASFIAECFENPAMKNKVLPVGGPGEAITPRAQGTYLFQSLGLEPRFRKVPVALMDWIIRALEFAGRFGPKYRDKAELARIGRYYATESMLVLNPKTGLYDADATPSFGKETLFEFYKKLANGDETPSLGDHAVFDRKSHV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXC2</accession>
    <name>A0A0M6ZXC2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Oxidoreductase YdhF</fullName>
            <ecNumber evidence="2">1.-.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ydhF</name>
        <name evidence="2" type="ORF">LAX5112_01102</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.-.-.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66812.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670967.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01102"/>
    <dbReference type="EnsemblBacteria" id="CTQ66812">
        <property type="protein sequence ID" value="CTQ66812"/>
        <property type="gene ID" value="LAX5112_01102"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020471">
        <property type="entry name" value="AKR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018170">
        <property type="entry name" value="Aldo/ket_reductase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023210">
        <property type="entry name" value="NADP_OxRdtase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036812">
        <property type="entry name" value="NADP_OxRdtase_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00248">
        <property type="entry name" value="Aldo_ket_red"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00069">
        <property type="entry name" value="ALDKETRDTASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51430">
        <property type="entry name" value="SSF51430"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00062">
        <property type="entry name" value="ALDOKETO_REDUCTASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aldo_ket_red" evidence="1">
        <location>
            <begin position="14"/>
            <end position="288"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00248"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66812.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="296" mass="32734" checksum="7C3ECF91BAD15C85" modified="2015-12-09" version="1">MDRVKLNDTLEFSRLIYGMWRLGDDADTSPAHVERKIQSCLDQGITTFDQADIYGDYGAEAVLGGAMKANPSLRNKMEIITKCDIVAPCGRYADAKVKYYDTSRAHIEKSVEISLKEMAIETVDLLLIHRPDPFMDHHETGAALDDLVKSGKVKNIGVSNFRPWDWELLQSAMTNTLVTNQIEISLKEISPFTNGDLAFHQRLGTKLMAWSPLGGGSLISKGGNLGSVMDEIAHSFGVDRSAVAVAFLLAHPAHLMPVMGTNNLERIGKISDALKVKLDRETWYRLYEAALGNEVP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXI0</accession>
    <name>A0A0M6ZXI0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01381</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67419.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671185.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01381"/>
    <dbReference type="EnsemblBacteria" id="CTQ67419">
        <property type="protein sequence ID" value="CTQ67419"/>
        <property type="gene ID" value="LAX5112_01381"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011740">
        <property type="entry name" value="DUF2460"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09343">
        <property type="entry name" value="DUF2460"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02217">
        <property type="entry name" value="chp_TIGR02217"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67419.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="211" mass="22829" checksum="3148DFBAE7E60595" modified="2015-12-09" version="1">MDAFLNESFPGSIAFGALGGPERRTEIVPLATGYETRNARWADSRRRYDAATGVRSLEDLRTVLALFEKARGQLYGFRLRDPFDHASSMTGNTPQPVDQSLGDGDGSTVRFPLIKTYGSGDMAYRRAIRLPVASSVRVAVAGAEQTAGTDFEVDSSTGDIVFSAAPSVGNSVTAGFLFDVPVRFDTDRLDLSLTHFEAGDIPSIPLVEIRF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXI8</accession>
    <name>A0A0M6ZXI8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01128</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66882.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670984.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01128"/>
    <dbReference type="EnsemblBacteria" id="CTQ66882">
        <property type="protein sequence ID" value="CTQ66882"/>
        <property type="gene ID" value="LAX5112_01128"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021927">
        <property type="entry name" value="DUF3540"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12059">
        <property type="entry name" value="DUF3540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66882.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="213" mass="22437" checksum="10064255A5FEC0FC" modified="2015-12-09" version="1">MKQQTSRKAETASKTATPPPTPGNGLETGIVKALLTEQDAMVTLSDGEQIHASQAAGCLLAPAIGDTVLVYRGADQAFILSVLIRDADVSAEIGVAGAKEVALKSEGRLTVSAPDVHVSARRMNVLAESVTQTGKQLITNFTRSMETLVDKMVNARTITTTAQSRSSSVKETETLKAGILVQNIDSVATQNSDISMITAEEDVRLDAKRVSVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXW2</accession>
    <name>A0A0M6ZXW2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Phospho-2-dehydro-3-deoxyheptonate aldolase</fullName>
            <ecNumber evidence="3">2.5.1.54</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">aroH</name>
        <name evidence="4" type="ORF">LAX5112_00955</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>D-erythrose 4-phosphate + H2O + phosphoenolpyruvate = 7-phospho-2-dehydro-3-deoxy-D-arabino-heptonate + phosphate</text>
            <dbReference type="Rhea" id="RHEA:14717"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16897"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58394"/>
            <dbReference type="ChEBI" id="CHEBI:58702"/>
            <dbReference type="EC" id="2.5.1.54"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the class-II DAHP synthase family.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.54" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66403.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670875.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00955"/>
    <dbReference type="EnsemblBacteria" id="CTQ66403">
        <property type="protein sequence ID" value="CTQ66403"/>
        <property type="gene ID" value="LAX5112_00955"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003849">
        <property type="term" value="F:3-deoxy-7-phosphoheptulonate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009073">
        <property type="term" value="P:aromatic amino acid family biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002480">
        <property type="entry name" value="DAHP_synth_2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21337">
        <property type="entry name" value="PTHR21337"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01474">
        <property type="entry name" value="DAHP_synth_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01358">
        <property type="entry name" value="DAHP_synth_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3 4" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008911"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU363071"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ66403.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="460" mass="50887" checksum="51C10C9B2EF15BC8" modified="2015-12-09" version="1">MADKWSPDSWRSKPILQVPEYPDQAAVTDVEQRLSTYPPLVFAGEARALKSQLADVANGKGFLLQGGDCAESFAEHHPDHIRDFFRVFLQMAVVLTFAASQPVVKVGRIAGQFAKPRSSNIEKKGDVELPSYRGDIINDINFTSDSRIPDPTRMSMAYRQSAATLNLLRAFSQGGFANLDQVHQWMLGFITDSPQGHRYKELADRISESLAFMRACGINGDSVPQLRATDFFTSHEALLLGYEEALTRVDSTSGDWYATSGHMLWIGDRTRQPDHAHVEFFRGIKNPIGLKCGPSLTPDGLLDLIDALNPDNEPGRLTLIARFGSDKVFDHLPQLVRAVEREGKSVVWSCDPMHGNTISAGGYKTRPFDRILKEVEAFFAVHRAEGTHAGGVHVEMTGRNVTECTGGARALTEEQLGDRYHTHCDPRLNADQALELAFLIAENLKKEKDGKQKEPLAASA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYH0</accession>
    <name>A0A0M6ZYH0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Regulatory protein of adaptative response</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">ada_1</name>
        <name evidence="6" type="ORF">LAX5112_01294</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67256.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671123.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01294"/>
    <dbReference type="EnsemblBacteria" id="CTQ67256">
        <property type="protein sequence ID" value="CTQ67256"/>
        <property type="gene ID" value="LAX5112_01294"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035451">
        <property type="entry name" value="Ada-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004026">
        <property type="entry name" value="Ada_DNA_repair_Zn-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016220">
        <property type="entry name" value="Me-P-triester_DNA_alkyl-Trfase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02805">
        <property type="entry name" value="Ada_Zn_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000408">
        <property type="entry name" value="Alkyltransferas_AdaA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57884">
        <property type="entry name" value="SSF57884"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0227">DNA damage</keyword>
    <keyword evidence="4" id="KW-0234">DNA repair</keyword>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="5">
        <location>
            <begin position="86"/>
            <end position="184"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ67256.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="192" mass="21295" checksum="4D85642E17001E74" modified="2015-12-09" version="1">MLEFQTCEAARLSRDPRFDGVFFVGVKTSRIYCRTICPVRQPLSKNIIYFTTAAAAEAGGYRPCLRCRPETAPKSAAWNGTLSTVSRAMKLIEEGALDTASLPELAERLGIGERHLSRLFKKHVGATPLQTAKTIRLQRAKRLLDESDLKVAEIAFQSGFGSVRQFNASFSQAYPYAPSDYRNKRRKASGTG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYM8</accession>
    <name>A0A0M6ZYM8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Phytanoyl-CoA dioxygenase (PhyH)</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01372</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67401.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671177.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01372"/>
    <dbReference type="EnsemblBacteria" id="CTQ67401">
        <property type="protein sequence ID" value="CTQ67401"/>
        <property type="gene ID" value="LAX5112_01372"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051213">
        <property type="term" value="F:dioxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008775">
        <property type="entry name" value="Phytyl_CoA_dOase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05721">
        <property type="entry name" value="PhyH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0223">Dioxygenase</keyword>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67401.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="392" mass="42752" checksum="094C0EF3587C5847" modified="2015-12-09" version="1">MDQQITPTGYFDETSCDLDAFVALTGRQLDMADVPHADRVLKNVPVYRINDLQNSLQGESTRRRLMAEWAAVLKDLSGVLVLEGAFPDTGPIDRATDVYNQIIAEEKAQSGGGADHFAAAGSNDRIWNSLQKLCLAAPDVFADYFANPAIDAVCEAWLGPNYQMTAQVNLVRPGGAPQQAHRDYHLGFQSAAECARYPAHVHDLSPVMTLQGAVAHTDMPVESGPTKLLPFSQLYRPGYAAYRLDAFKDYFEGAHVQLPLSKGDAVFFNPALFHAAGANTSSNIHRMANLLQISSAFGRAMESVDRIAMCCALYPVLLDKVLSEVAEMRALEATVSACAEGYSFPTNLDRDPPVGGLAPETQKQLMLRALEEKWSGSKFENALIEQAGRRQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZP3</accession>
    <name>A0A0M6ZZP3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Putative MFS-type transporter YhjX</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">yhjX_1</name>
        <name evidence="7" type="ORF">LAX5112_01527</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67807.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671328.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67807">
        <property type="protein sequence ID" value="CTQ67807"/>
        <property type="gene ID" value="LAX5112_01527"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="21"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="57"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="81"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="107"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="143"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="175"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="223"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="253"/>
            <end position="278"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="290"/>
            <end position="308"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="314"/>
            <end position="336"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="348"/>
            <end position="371"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="377"/>
            <end position="400"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="6">
        <location>
            <begin position="20"/>
            <end position="403"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ67807.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="410" mass="42956" checksum="10DC3E6E2CE06D30" modified="2015-12-09" version="1">MSATATNDPFAPDGSYAWFRLAVSILLSTLGGAGMWAVVIIMPAVQADFGIDRAGSAIPYTLTMIGFGLGNYLLGRVVDRYGIVLPVIASAVSLGAGFALAAVAPNIWVFSLAQGVLIGLGTSATFGPLVADVSHWFVKRRGLAVACAACGNYLAGVLWPSLIKWNLGTGDWRDTYLLIAFICLVTMVPLALALRRRPPETAYSASPAPTGFHQASAGLSPRALQMLLFVAALGCCVAMAMPQVHIVAYCVDLGYGVAPGAEMIAIMTAAGVASRLVSGVLADKIGGVRTLLIGAVLQCAALFLFIPFNGLASLYLVSLIFGLSQGGIVPSYAVIVREYLPAREAGQRVGLVIMGTILGMALGGWLSGWIYDLTGSYQAAFLNGIAWNFLNITIMIFILMKGKRRLAAAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZS7</accession>
    <name>A0A0M6ZZS7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01197</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67063.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67063">
        <property type="protein sequence ID" value="CTQ67063"/>
        <property type="gene ID" value="LAX5112_01197"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67063.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="92" mass="10220" checksum="20CBD5843D7B89C5" modified="2015-12-09" version="1">MNSFMPEIGDVFGNISAEIISSNGEISHLYHAEDLDNGGLKSRVSEMNDHELLTFISNTAERRLKAEGKTMKAVDFYVAAARCAREVRKEVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0D5</accession>
    <name>A0A0M7A0D5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01308</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67283.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671133.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67283">
        <property type="protein sequence ID" value="CTQ67283"/>
        <property type="gene ID" value="LAX5112_01308"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67283.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="77" mass="8553" checksum="A771506D6209E047" modified="2015-12-09" version="1">MRSELDRHMLGPSVPRAISPETYSALRADGFLEDGQIRRDLVPQLVNSQRARAKFDGNGLAALASLFGALFKKVRRI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0E4</accession>
    <name>A0A0M7A0E4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01556</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67882.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008189941.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01556"/>
    <dbReference type="EnsemblBacteria" id="CTQ67882">
        <property type="protein sequence ID" value="CTQ67882"/>
        <property type="gene ID" value="LAX5112_01556"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13443">
        <property type="entry name" value="HTH_26"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00530">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="1">
        <location>
            <begin position="13"/>
            <end position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67882.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="71" mass="8070" checksum="2F491640CCA68785" modified="2015-12-09" version="1">MPIIIELDVMLARRKMRSKELAERIGITEQNVSLLKSGKVKGVRFETLEKICEVLDCQPGDILIYQAPEDP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0Y1</accession>
    <name>A0A0M7A0Y1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">DNA repair protein RadC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">LAX5112_01398</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="6">Belongs to the UPF0758 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67454.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01398"/>
    <dbReference type="EnsemblBacteria" id="CTQ67454">
        <property type="protein sequence ID" value="CTQ67454"/>
        <property type="gene ID" value="LAX5112_01398"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008237">
        <property type="term" value="F:metallopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd08071">
        <property type="entry name" value="MPN_DUF2466"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037518">
        <property type="entry name" value="MPN"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025657">
        <property type="entry name" value="RadC_JAB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010994">
        <property type="entry name" value="RuvA_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001405">
        <property type="entry name" value="UPF0758"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020891">
        <property type="entry name" value="UPF0758_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30471">
        <property type="entry name" value="PTHR30471"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04002">
        <property type="entry name" value="RadC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47781">
        <property type="entry name" value="SSF47781"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00608">
        <property type="entry name" value="radc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50249">
        <property type="entry name" value="MPN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01302">
        <property type="entry name" value="UPF0758"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-0482">Metalloprotease</keyword>
    <keyword evidence="1" id="KW-0645">Protease</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="MPN" evidence="7">
        <location>
            <begin position="118"/>
            <end position="240"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003797"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50249"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ67454.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="240" mass="26976" checksum="55814AA5F6B41912" modified="2015-12-09" version="1">MSNGGNEPGSRSLALQPVIDLNHAKEQLRFRCREVGPDALTDLEIITLLLVPLYRWEHAETIAQRLLSEFQSLPELLNAPRHRLLEFPGVGPVLADTLSAIRQCIVRSARAEITERRVLDCWSEVIDYIQATMGYLEIEQFRCLFLNKKHGIIADEIMHEGTVDHTPVYPRELMRRALILQASALILVHNHPSGDPTPSRTDIEMTAQLVDIAKPLGIEINDHIIVARGLAVSFKGMNLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A177</accession>
    <name>A0A0M7A177_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">50S ribosomal protein L11</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 10" type="primary">rplK</name>
        <name evidence="10" type="ORF">LAX5112_01713</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5 7">Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Part of the ribosomal stalk of the 50S ribosomal subunit. Interacts with L10 and the large rRNA to form the base of the stalk. L10 forms an elongated spine to which L12 dimers bind in a sequential fashion forming a multimeric L10(L12)X complex.</text>
    </comment>
    <comment type="PTM">
        <text evidence="5 7">One or more lysine residues are methylated.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 5 6">Belongs to the universal ribosomal protein uL11 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68367.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008189994.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01713"/>
    <dbReference type="EnsemblBacteria" id="CTQ68367">
        <property type="protein sequence ID" value="CTQ68367"/>
        <property type="gene ID" value="LAX5112_01713"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070180">
        <property type="term" value="F:large ribosomal subunit rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00349">
        <property type="entry name" value="Ribosomal_L11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.250">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00736">
        <property type="entry name" value="Ribosomal_L11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000911">
        <property type="entry name" value="Ribosomal_L11/L12"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036796">
        <property type="entry name" value="Ribosomal_L11/L12_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006519">
        <property type="entry name" value="Ribosomal_L11_bac-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020783">
        <property type="entry name" value="Ribosomal_L11_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036769">
        <property type="entry name" value="Ribosomal_L11_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020784">
        <property type="entry name" value="Ribosomal_L11_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11661">
        <property type="entry name" value="PTHR11661"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00298">
        <property type="entry name" value="Ribosomal_L11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03946">
        <property type="entry name" value="Ribosomal_L11_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00649">
        <property type="entry name" value="RL11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46906">
        <property type="entry name" value="SSF46906"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54747">
        <property type="entry name" value="SSF54747"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01632">
        <property type="entry name" value="L11_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 5 7" id="KW-0488">Methylation</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5 6" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3 5 6" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="5 7" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="5 7" id="KW-0699">rRNA-binding</keyword>
    <feature type="domain" description="Ribosomal_L11_N" evidence="9">
        <location>
            <begin position="9"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="domain" description="Ribosomal_L11" evidence="8">
        <location>
            <begin position="72"/>
            <end position="140"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010537"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022481"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00736"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003978"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003979"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00298"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF03946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ68367.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="142" mass="15048" checksum="B8F278E2A51A7077" modified="2015-12-09" version="1">MAKKIEGFLKLQVPAGSATPSPPIGPALGQRGLNIMEFCKAFNAQTQDVEKGAPCPTVITYYSDKSFTFEVKTAPVSFFLKKAAKLPKGSSTPGRGTVGSVSKAQVKEIAEAKMKDLNANDIDAAMLMVEGSARSMGFEVTE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A186</accession>
    <name>A0A0M7A186_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01874</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68755.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ68755">
        <property type="protein sequence ID" value="CTQ68755"/>
        <property type="gene ID" value="LAX5112_01874"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="36"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="54"/>
            <end position="88"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ68755.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="191" mass="20776" checksum="4ECF4885645B28A2" modified="2015-12-09" version="1">MDQDGFNKDLIVRALVTVAALAMVAVSIVYPDKITTEALVFCGIAVLPWAGSFVKSFKVGKDGLEAELQELQRELHQTSDTVSAIIETTAETEEPSAAGPEHLAMLETSTPSLIDDDWRKVLNALVSDKYNFRSATGIAKSSGLSLSQVRQILPALRDENLVRELSRTSQSRQLGKTQPLWGITAAGRHLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2F0</accession>
    <name>A0A0M7A2F0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">HTH-type quorum sensing-dependent transcriptional regulator VjbR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">vjbR</name>
        <name evidence="3" type="ORF">LAX5112_01560</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67893.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040450791.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01560"/>
    <dbReference type="EnsemblBacteria" id="CTQ67893">
        <property type="protein sequence ID" value="CTQ67893"/>
        <property type="gene ID" value="LAX5112_01560"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06170">
        <property type="entry name" value="LuxR_C_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016032">
        <property type="entry name" value="Sig_transdc_resp-reg_C-effctor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000792">
        <property type="entry name" value="Tscrpt_reg_LuxR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00196">
        <property type="entry name" value="GerE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00038">
        <property type="entry name" value="HTHLUXR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00421">
        <property type="entry name" value="HTH_LUXR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46894">
        <property type="entry name" value="SSF46894"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00622">
        <property type="entry name" value="HTH_LUXR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50043">
        <property type="entry name" value="HTH_LUXR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH luxR-type" evidence="2">
        <location>
            <begin position="164"/>
            <end position="229"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ67893.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="233" mass="25346" checksum="2BEE86CBB2747280" modified="2015-12-09" version="1">MLDQTELKNKLRAISEANAAHHVLDILESNLRRMGATHILITGLPMPNRPIDNLVQRFRWPDQRNDGIESTSLSANDSALMLGLGSNRARIWTITAGDMEHSDLMASAGEGSQIVVVPVTELYPFQAFVFASGPALQVSKYDLSNLEALSAAAISRLRELGVVSGQRPGALSTRERKVLELTAYGKTAGEIADVLDISQRTVHAHLQNASVKLNASNKTHTVVEALRYGQINV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2F5</accession>
    <name>A0A0M7A2F5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 5">50S ribosomal protein L17</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3 6" type="primary">rplQ</name>
        <name evidence="6" type="ORF">LAX5112_01751</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="3">Part of the 50S ribosomal subunit. Contacts protein L32.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 4">Belongs to the bacterial ribosomal protein bL17 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68470.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040450742.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01751"/>
    <dbReference type="EnsemblBacteria" id="CTQ68470">
        <property type="protein sequence ID" value="CTQ68470"/>
        <property type="gene ID" value="LAX5112_01751"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1030.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01368">
        <property type="entry name" value="Ribosomal_L17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000456">
        <property type="entry name" value="Ribosomal_L17"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036373">
        <property type="entry name" value="Ribosomal_L17_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14413">
        <property type="entry name" value="PTHR14413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01196">
        <property type="entry name" value="Ribosomal_L17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64263">
        <property type="entry name" value="SSF64263"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00059">
        <property type="entry name" value="L17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01167">
        <property type="entry name" value="RIBOSOMAL_L17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="1 3 4" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01368"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU000660"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU000661"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ68470.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="141" mass="15787" checksum="E47AE69D0201D52C" modified="2015-12-09" version="1">MRHGKSGRKLNRTASHRKAMFANMAASLIKHEQIVTTLPKAKEMKPIIDKLITLGKRGDLHARRQAISQIRDVAMVKKLFDTLGDRYKDREGGYSRVLKAGFRYGDNAPMAVIELVDRDLEARGADDRARVEAEEAAENAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A345</accession>
    <name>A0A0M7A345_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">YceI domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01983</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ69037.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671655.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01983"/>
    <dbReference type="EnsemblBacteria" id="CTQ69037">
        <property type="protein sequence ID" value="CTQ69037"/>
        <property type="gene ID" value="LAX5112_01983"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.128.110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007372">
        <property type="entry name" value="Lipid/polyisoprenoid-bd_YceI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036761">
        <property type="entry name" value="TTHA0802/YceI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04264">
        <property type="entry name" value="YceI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00867">
        <property type="entry name" value="YceI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101874">
        <property type="entry name" value="SSF101874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809420" description="YceI domain-containing protein" evidence="1">
        <location>
            <begin position="21"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="domain" description="YceI" evidence="2">
        <location>
            <begin position="24"/>
            <end position="188"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00867"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ69037.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="194" mass="21257" checksum="93960C08672333D5" modified="2015-12-09" version="1">MIRLATSAFALTVLAGAAVAEPVAFDFDKSHSNLSFTYDHLGYSTTDGRFGDWDGTLLIDKETPANSSIEFTIQIGSLDTFWADRDKHFLSADFFDVEKFPEATFKSTSVEQTGEKQLEVTGDLTIKGITKPTTLTVDVKAMGEHPMAKKESVGFAVNTVIKRSDFGMDMFVPYVGDEVTITFHTETLTTAATN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A388</accession>
    <name>A0A0M7A388_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Extracytoplasmic solute receptor protein</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">TRAP transporter</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_01919</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Part of the tripartite ATP-independent periplasmic (TRAP) transport system.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the bacterial solute-binding protein 7 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68876.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671611.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01919"/>
    <dbReference type="EnsemblBacteria" id="CTQ68876">
        <property type="protein sequence ID" value="CTQ68876"/>
        <property type="gene ID" value="LAX5112_01919"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031317">
        <property type="term" value="C:tripartite ATP-independent periplasmic transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071702">
        <property type="term" value="P:organic substance transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.190.170">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018389">
        <property type="entry name" value="DctP_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026289">
        <property type="entry name" value="SBP_TakP-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006311">
        <property type="entry name" value="TAT_signal"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038404">
        <property type="entry name" value="TRAP_DctP_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33376">
        <property type="entry name" value="PTHR33376"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03480">
        <property type="entry name" value="DctP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF039026">
        <property type="entry name" value="SiaP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3" id="KW-0574">Periplasm</keyword>
    <keyword evidence="7" id="KW-0675">Receptor</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="6">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809421" description="Extracytoplasmic solute receptor protein" evidence="6">
        <location>
            <begin position="26"/>
            <end position="354"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4 5">
        <location>
            <position position="153"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="174"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="211"/>
        </location>
        <ligand>
            <name>a metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:25213"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="237"/>
        </location>
        <ligand>
            <name>a metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:25213"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRNR" id="PIRNR039026"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR039026-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR039026-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ68876.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="354" mass="37688" checksum="C4A947294A8FBCD9" modified="2015-12-09" version="1">MKRRDFLKAGAVAAPATMLAAPAIAQGKIEWKMPTSFPAKAPGVGTNATTFAARVNAMSDGQLTLKVFSGGELVPPFGVEDAVEQGTAEIGHSTPYYAASKNSALHFFSAVPFGMTAVETTAWLQYGGGRQLWDEIYAERGLKPFYSGSSGVQAAGWFKKPVNSLEDLAGLNMRIAGLGGEAMRKIGVNAVLLPPPEIFPSFQSGAIDAAEWVGPLLDQAFGLQKVAKYCYVPAFHEPSAALEIVVNKEAFDSLPAHLQAVIENAAAAASVETTAQFDYYNALSLKSLQEDGVTFGAFPDDVIAALKTAVAEVMAENAEANPRFAEVQKSYNTFLDLAKDYATLVKEATFTQRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3M9</accession>
    <name>A0A0M7A3M9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Bacterial regulatory proteins, tetR family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02033</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69227.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671719.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ69227">
        <property type="protein sequence ID" value="CTQ69227"/>
        <property type="gene ID" value="LAX5112_02033"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00440">
        <property type="entry name" value="TetR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH tetR-type" evidence="2">
        <location>
            <begin position="20"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="90"/>
            <end position="124"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00440"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ69227.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="186" mass="20880" checksum="B2A457EEAA4D53A8" modified="2015-12-09" version="1">MSEKKRLGKEDWITLGFGQLVKKGIGGLTLEALCQTASRTKGSFYHHFKDHEAFLTALAHAWKKQNTLDVAEATLASAPEDQARTLALKAAQLDHDLDRAMRQFAQLNQTARQTVREVDDLRTRFIVALYRAQGLDDATANSIAKIEYAAFVGAQIIWPEMTAEERLRLDQKFADLVSRGTKQPHN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3S1</accession>
    <name>A0A0M7A3S1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Ribosome maturation factor RimM</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2 6" type="primary">rimM</name>
        <name evidence="6" type="ORF">LAX5112_02050</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Binds ribosomal protein S19.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="domain">
        <text evidence="2">The PRC barrel domain binds ribosomal protein S19.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the RimM family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69267.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671731.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02050"/>
    <dbReference type="EnsemblBacteria" id="CTQ69267">
        <property type="protein sequence ID" value="CTQ69267"/>
        <property type="gene ID" value="LAX5112_02050"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043022">
        <property type="term" value="F:ribosome binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042274">
        <property type="term" value="P:ribosomal small subunit biogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006364">
        <property type="term" value="P:rRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.30.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00014">
        <property type="entry name" value="Ribosome_mat_RimM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011961">
        <property type="entry name" value="16S_RimM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027275">
        <property type="entry name" value="PRC-brl_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011033">
        <property type="entry name" value="PRC_barrel-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002676">
        <property type="entry name" value="RimM_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036976">
        <property type="entry name" value="RimM_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009000">
        <property type="entry name" value="Transl_B-barrel_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05239">
        <property type="entry name" value="PRC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01782">
        <property type="entry name" value="RimM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50346">
        <property type="entry name" value="SSF50346"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50447">
        <property type="entry name" value="SSF50447"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02273">
        <property type="entry name" value="16S_RimM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0143">Chaperone</keyword>
    <keyword evidence="1 2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0690">Ribosome biogenesis</keyword>
    <feature type="domain" description="RimM" evidence="4">
        <location>
            <begin position="11"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="domain" description="PRC" evidence="5">
        <location>
            <begin position="96"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="167"/>
            <end position="186"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF01782"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF05239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ69267.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="186" mass="20807" checksum="5749F49835FBF538" modified="2015-12-09" version="1">MSSKETQKVLMAKIGAAHGVRGEVRVKPFGDDPLSFTDYGVLTTKDGKQSFEVVSARVQKTVVVTKFKEVTDRNRAEEINGTELYIDRDQLPETDEDEFYYSDLNGLDVKDPQGELLGKIVAVQDFGAGDLFEIRPKRGKTFYIPFTKEFVPTINLDSGFVVADLPEDYLSDEKPDPESSTDSPDR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A443</accession>
    <name>A0A0M7A443_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">DNA polymerase IV</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02044</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69252.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02044"/>
    <dbReference type="EnsemblBacteria" id="CTQ69252">
        <property type="protein sequence ID" value="CTQ69252"/>
        <property type="gene ID" value="LAX5112_02044"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043502">
        <property type="entry name" value="DNA/RNA_pol_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56672">
        <property type="entry name" value="SSF56672"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ69252.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="511" mass="55975" checksum="1256B42C694A7A62" modified="2015-12-09" version="1">MNDTARACGLRLGEAEADARARIPHLLCEDADPEKDTALLGAVADWCARYTPLVALDGKDGLFLDITGCAHLFKGEEALLKDALERLHRQGFCVAGAIAGTAGAAWALARFGSGGVLADSQERQALAPLPLAALRVSSEAVSGLNQVGLKTIGQLYDRPRAPLTNRFGADLILRLDQALGWQGEAISPRFEAPLISAERRFFDPISQLDDVKAVALSLAGQAAKALERRVEGGRVFELSLFRVDGAVQKFRVGTSSPLRDPKRVLRLFAEKLKADEGAIDAGFGYDLVRLDVLVADKAPAVQSALTANGAVEANASLDDLVDRLGARLGSEHVTRLLPVDRHLPESQTGYVPADFARQDALVWSGFLKSAAAPDLHRARASANPQLGFAEDTRPAEEAKPSSWQEGLMTRPLRLIEPAEEVEALAMVPDGPPLRFRWRRSIYQVVRSEGPERIAPPWWIGANDRPSEAKEGVTRDYFRIEDTEGRRFWLYREGLYERETSRPRWYLQGLFA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4K8</accession>
    <name>A0A0M7A4K8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01788</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68564.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01788"/>
    <dbReference type="EnsemblBacteria" id="CTQ68564">
        <property type="protein sequence ID" value="CTQ68564"/>
        <property type="gene ID" value="LAX5112_01788"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019882">
        <property type="entry name" value="CHP03643"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10985">
        <property type="entry name" value="DUF2805"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="14"/>
            <end position="33"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68564.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="94" mass="11173" checksum="A6268D018A602619" modified="2015-12-09" version="1">MRSSNAEQEMLPLKTKSSMRRKKLTDPSELSEEHASEVIEMALSDHVSFAEIELEYGLYEPQVKALMRDRLKPSSYRAWRKRVRKFSDRRAHYK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5R2</accession>
    <name>A0A0M7A5R2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Lipoprotein-releasing system transmembrane protein LolE</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">lolE_1</name>
        <name evidence="10" type="ORF">LAX5112_02300</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ABC-4 integral membrane protein family. LolC/E subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ69957.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671936.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02300"/>
    <dbReference type="EnsemblBacteria" id="CTQ69957">
        <property type="protein sequence ID" value="CTQ69957"/>
        <property type="gene ID" value="LAX5112_02300"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003838">
        <property type="entry name" value="ABC3_permease_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025857">
        <property type="entry name" value="MacB_PCD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02687">
        <property type="entry name" value="FtsX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12704">
        <property type="entry name" value="MacB_PCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="10" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="20"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="277"/>
            <end position="298"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="325"/>
            <end position="354"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="375"/>
            <end position="394"/>
        </location>
    </feature>
    <feature type="domain" description="MacB_PCD" evidence="9">
        <location>
            <begin position="19"/>
            <end position="251"/>
        </location>
    </feature>
    <feature type="domain" description="FtsX" evidence="8">
        <location>
            <begin position="307"/>
            <end position="404"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005236"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF02687"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF12704"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ69957.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="412" mass="44250" checksum="C83E96A5F8A2164B" modified="2015-12-09" version="1">MILQFRIAATHVRNRLRQTVVSTLGVALGVGFSIAMAALMEGSQRDFMATLIDAIPHVEIKDDKRTPTAQPASTVYDAVAFRGLRPLEDLRGIRNPTEALASLRDWVDGDIAQRLTGQAVLRYSGQDIGMTLIGVRPKQELLVSNIGEDIRKGDFEDLGTTSNGLVLGDKAAERLGADLGDTVTLTSANGVAKRFKIVGLFHTGITTSDESLAYAPLKAVQILLEKPDIINAITIRLRNIDEAVAIAARAERQLGYKAISWEEANEGLMEAFFVRNVIMFTAVGGILLVAGFGIYNIISTIVHEKAQDIAILKSLGFPEPDIQQIFVLEGLVIGVLGALVGSALGFGLSTYLATIKFEVTTDIEMTRLPIYFSHVHYVIASGLALLSAGIAGFVPARKAAALNPVDIIRGAT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A714</accession>
    <name>A0A0M7A714_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02414</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70216.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672025.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70216">
        <property type="protein sequence ID" value="CTQ70216"/>
        <property type="gene ID" value="LAX5112_02414"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13673">
        <property type="entry name" value="Acetyltransf_10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="3"/>
            <end position="153"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70216.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="153" mass="16735" checksum="B6AD536C2E394DB7" modified="2015-12-09" version="1">MDVEITVADKSDAKQILELQKIAFHKEAALNGDMQIAPMVEALADTESAFTTHVFLIARKGADIIGSVRVRAEDDTCHIGRLFVAPEHQGRGIGRQLFIAAEEKFPSAGSYRLITGKLSSGNIRLYESLGYQVTGAMMENGRTPLVVMEKDRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A750</accession>
    <name>A0A0M7A750_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02442</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70272.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70272">
        <property type="protein sequence ID" value="CTQ70272"/>
        <property type="gene ID" value="LAX5112_02442"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ70272.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="61" mass="7314" checksum="44ADA39BC513890B" modified="2015-12-09" version="1">MITQIVLVAMHGPEQIKFKSVRVSMVFNHLKMIVHRIEILRRVRRRRHRRPDAQAEAEKPC</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A838</accession>
    <name>A0A0M7A838_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Autotransport protein MisL</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02605</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70771.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672188.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02605"/>
    <dbReference type="EnsemblBacteria" id="CTQ70771">
        <property type="protein sequence ID" value="CTQ70771"/>
        <property type="gene ID" value="LAX5112_02605"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="235"/>
            <end position="268"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="355"/>
            <end position="412"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="506"/>
            <end position="531"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="864"/>
            <end position="922"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="370"/>
            <end position="392"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="516"/>
            <end position="530"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="893"/>
            <end position="922"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70771.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="1025" mass="108203" checksum="13CF0B71B088967B" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A893</accession>
    <name>A0A0M7A893_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Transcription termination/antitermination protein NusA</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7 11" type="primary">nusA</name>
        <name evidence="11" type="ORF">LAX5112_02800</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Participates in both transcription termination and antitermination.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Monomer. Binds directly to the core enzyme of the DNA-dependent RNA polymerase and to nascent RNA.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the NusA family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71375.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672343.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02800"/>
    <dbReference type="EnsemblBacteria" id="CTQ71375">
        <property type="protein sequence ID" value="CTQ71375"/>
        <property type="gene ID" value="LAX5112_02800"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006353">
        <property type="term" value="P:DNA-templated transcription, termination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031564">
        <property type="term" value="P:transcription antitermination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1480.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.20">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00945_B">
        <property type="entry name" value="NusA_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010995">
        <property type="entry name" value="DNA_repair_Rad51/TF_NusA_a-hlx"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004087">
        <property type="entry name" value="KH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015946">
        <property type="entry name" value="KH_dom-like_a/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025249">
        <property type="entry name" value="KH_dom_NusA-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009019">
        <property type="entry name" value="KH_sf_prok-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030842">
        <property type="entry name" value="NusA_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036555">
        <property type="entry name" value="NusA_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022967">
        <property type="entry name" value="S1_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003029">
        <property type="entry name" value="S1_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013735">
        <property type="entry name" value="TF_NusA_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010214">
        <property type="entry name" value="Tscrpt_termin_fac_NusA_C_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010213">
        <property type="entry name" value="Tscrpt_termination_fac_NusA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22648">
        <property type="entry name" value="PTHR22648"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13184">
        <property type="entry name" value="KH_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08529">
        <property type="entry name" value="NusA_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00575">
        <property type="entry name" value="S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00322">
        <property type="entry name" value="KH"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00316">
        <property type="entry name" value="S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47794">
        <property type="entry name" value="SSF47794"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54814">
        <property type="entry name" value="SSF54814"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69705">
        <property type="entry name" value="SSF69705"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01953">
        <property type="entry name" value="NusA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01954">
        <property type="entry name" value="nusA_Cterm_rpt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50126">
        <property type="entry name" value="S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2 7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="6 7" id="KW-0804">Transcription</keyword>
    <keyword evidence="3 7" id="KW-0889">Transcription antitermination</keyword>
    <keyword evidence="5 7" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="1 7" id="KW-0806">Transcription termination</keyword>
    <feature type="domain" description="S1 motif" evidence="10">
        <location>
            <begin position="140"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="523"/>
            <end position="550"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="8">
        <location>
            <begin position="411"/>
            <end position="438"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="9">
        <location>
            <begin position="523"/>
            <end position="540"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022472"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022814"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00945"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50126"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ71375.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="550" mass="60894" checksum="56D80684CF3B91FB" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8A6</accession>
    <name>A0A0M7A8A6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Gcv operon activator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">gcvA_10</name>
        <name evidence="3" type="ORF">LAX5112_02520</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70470.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672095.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02520"/>
    <dbReference type="EnsemblBacteria" id="CTQ70470">
        <property type="protein sequence ID" value="CTQ70470"/>
        <property type="gene ID" value="LAX5112_02520"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00039">
        <property type="entry name" value="HTHLYSR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="6"/>
            <end position="63"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ70470.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="294" mass="32698" checksum="0F1314DE1F362DE0" modified="2015-12-09" version="1">MAYNLPPLPWLRAFEAAARLGNFTRAAEELLITPAAVSYQVRQLEQQLGYPLFDRLHRELKLTRLGQTYLPSVEKAFSDLSIATVSVFGGRERKPVRFRCLSSFGHLWMIPRLAAFQAENPGIDVQMISAAWAETLNPDLFEIDVRFGDGSWSDGAVEFLVNDPVIAVCHPDIALANTQSDVGQLSQAVRLDIMGVLDTWESFFRLYGHAVPGRSGLQVDQTLSALELAALGHGHALVLETLANPYLESGRLIRSTDKVITSRHSYYLVTSGPRQALSPEAQAFCDWLIREMRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A914</accession>
    <name>A0A0M7A914_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Protease 3</fullName>
            <ecNumber evidence="6">3.4.24.55</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">ptrA_2</name>
        <name evidence="6" type="ORF">LAX5112_02369</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 3">Belongs to the peptidase M16 family.</text>
    </comment>
    <dbReference type="EC" id="3.4.24.55" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70124.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671988.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02369"/>
    <dbReference type="EnsemblBacteria" id="CTQ70124">
        <property type="protein sequence ID" value="CTQ70124"/>
        <property type="gene ID" value="LAX5112_02369"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004222">
        <property type="term" value="F:metalloendopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011249">
        <property type="entry name" value="Metalloenz_LuxS/M16"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011765">
        <property type="entry name" value="Pept_M16_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001431">
        <property type="entry name" value="Pept_M16_Zn_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007863">
        <property type="entry name" value="Peptidase_M16_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00675">
        <property type="entry name" value="Peptidase_M16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05193">
        <property type="entry name" value="Peptidase_M16_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63411">
        <property type="entry name" value="SSF63411"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00143">
        <property type="entry name" value="INSULINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-0645">Protease</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidase_M16" evidence="4">
        <location>
            <begin position="14"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_M16_C" evidence="5">
        <location>
            <begin position="169"/>
            <end position="337"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007261"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU004447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00675"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF05193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ70124.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="429" mass="46320" checksum="C28260025814EAA2" modified="2015-12-09" version="1">MKVETTVLENGLTVVTDQMPHLKTAALGVWVRTGSRAENADQNGITHLLEHMAFKGTKSRSARGIAEEIEAVGGELNASTSIEHTNYYARILAEDLPLAVDILADILQNSTFEAEELVREQHVILQEIGASNDAPEDQAFDLFQATAWPEQAIGRPILGTPETVQAFGRDSLNDYLASRYRAPDMVLSAAGAVDHDELVSLARQKFGAINSEPAAPDPDARYSGGEKLLNKDLMEAQVLIGFEGRPYKAKDYYAIQILASVLGGGMSSRLFQEIREKHGLCYAIYSFHWAFSDTGLFGIHAATSHEDLGALMPMIADELVSAAHTITEDEVARSRAQIRAGLMMALESPAARAGQIARQILVHGRVLAPDEISAKIEAVTAADIREAAYNTFVGTTPTLTAIGPINGIMTADELAARLQQAPVRQAASM</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9A7</accession>
    <name>A0A0M7A9A7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Chromosome partition protein Smc</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3 5" type="primary">smc</name>
        <name evidence="5" type="ORF">LAX5112_02408</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Required for chromosome condensation and partitioning.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="domain">
        <text evidence="3">Contains large globular domains required for ATP hydrolysis at each terminus and a third globular domain forming a flexible hinge near the middle of the molecule. These domains are separated by coiled-coil structures.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the SMC family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70204.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672022.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02408"/>
    <dbReference type="EnsemblBacteria" id="CTQ70204">
        <property type="protein sequence ID" value="CTQ70204"/>
        <property type="gene ID" value="LAX5112_02408"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005694">
        <property type="term" value="C:chromosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030261">
        <property type="term" value="P:chromosome condensation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007062">
        <property type="term" value="P:sister chromatid cohesion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01894">
        <property type="entry name" value="Smc_prok"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003395">
        <property type="entry name" value="RecF/RecN/SMC_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024704">
        <property type="entry name" value="SMC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036277">
        <property type="entry name" value="SMC_hinge_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011890">
        <property type="entry name" value="SMC_prok"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02463">
        <property type="entry name" value="SMC_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005719">
        <property type="entry name" value="SMC"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75553">
        <property type="entry name" value="SSF75553"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02168">
        <property type="entry name" value="SMC_prok_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 3" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="1 3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SMC_N" evidence="4">
        <location>
            <begin position="4"/>
            <end position="1135"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="3">
        <location>
            <begin position="177"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="3">
        <location>
            <begin position="300"/>
            <end position="508"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="3">
        <location>
            <begin position="630"/>
            <end position="741"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="3">
        <location>
            <begin position="783"/>
            <end position="908"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="3">
        <location>
            <begin position="935"/>
            <end position="990"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="32"/>
            <end position="39"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01894"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF02463"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ70204.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="1152" mass="127655" checksum="167306BF0349DA72" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AA26</accession>
    <name>A0A0M7AA26_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Peptidase_S24 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03000</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71995.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672498.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03000"/>
    <dbReference type="EnsemblBacteria" id="CTQ71995">
        <property type="protein sequence ID" value="CTQ71995"/>
        <property type="gene ID" value="LAX5112_03000"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd06529">
        <property type="entry name" value="S24_LexA-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039418">
        <property type="entry name" value="LexA-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036286">
        <property type="entry name" value="LexA/Signal_pep-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015927">
        <property type="entry name" value="Peptidase_S24_S26A/B/C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00717">
        <property type="entry name" value="Peptidase_S24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51306">
        <property type="entry name" value="SSF51306"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidase_S24" evidence="1">
        <location>
            <begin position="111"/>
            <end position="196"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00717"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71995.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="212" mass="23017" checksum="8D86C2FED25DECA6" modified="2015-12-09" version="1">MLSHEKVWAAIDALASYNEMTPSGLAKRAGLDPTTFNRSKRFAGDGRPRWPSTESLAKILEATGESLKSFAGRVEAPEQRASTALSALPVAGFSNVHEENAFDTTGRPTGEHWETIVFPTDHTQNIFALEVSGDALLPLYREGDLIVVAPSAAVRRGDRIVLKPSEGGLAVYTLLKRTPKTLQVQTIGDNPENAALLHSAIEWTARIIWASQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AA59</accession>
    <name>A0A0M7AA59_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Neu5Ac permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">siaT_19</name>
        <name evidence="5" type="ORF">LAX5112_02724</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71120.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672275.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02724"/>
    <dbReference type="EnsemblBacteria" id="CTQ71120">
        <property type="protein sequence ID" value="CTQ71120"/>
        <property type="gene ID" value="LAX5112_02724"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010656">
        <property type="entry name" value="DctM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004681">
        <property type="entry name" value="TRAP_DctM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33362">
        <property type="entry name" value="PTHR33362"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06808">
        <property type="entry name" value="DctM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006066">
        <property type="entry name" value="HI0050"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00786">
        <property type="entry name" value="dctM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="6"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="57"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="97"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="138"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="174"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="217"/>
            <end position="238"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="244"/>
            <end position="264"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="276"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="315"/>
            <end position="333"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="366"/>
            <end position="394"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="406"/>
            <end position="434"/>
        </location>
    </feature>
    <feature type="domain" description="DctM" evidence="4">
        <location>
            <begin position="8"/>
            <end position="430"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF06808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ71120.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="435" mass="45498" checksum="0247568C44004615" modified="2015-12-09" version="1">MLEALIGFAALFGLVLLRVPIAVAMIIVGTVGFAMLRNWNAAFNLLGNAAFDTGLSFTLSVIPLFILMGNLLTISGVSQSLFTTAHRALHKMRGGLAMATIVACGGFSAVCGSSLATAATMSKVAMPSMRKAGYADSLATGSIAAGGTLGILIPPSVILIIYGLLTEADIGKLFVAGIIPGLLGVVFYMAAVYVTVLMKPNLAPSSHDDIPVERKDVWGVLAVLGLFAIIMIGIYGGFFTPTEAAGIGAATAFLIALFSGGLTFEKLFQAGLNCARTTAMIFAIIIGAEVFSNFISYAGVPDALLEFVQSLDVNAYVVILVLVLIYVILGAVLESLSMILLTVPVFFPLVTSLDFGTGTLSDPEMVLIWFGIIVVVVTEISLISPPIGLNVFVLRSVLTDVPLRTMFAGILPFWAADILRLGLLIAVPALSLALI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AA77</accession>
    <name>A0A0M7AA77_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Cation efflux system protein CzcA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">czcA_3</name>
        <name evidence="2" type="ORF">LAX5112_02919</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71759.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02919"/>
    <dbReference type="EnsemblBacteria" id="CTQ71759">
        <property type="protein sequence ID" value="CTQ71759"/>
        <property type="gene ID" value="LAX5112_02919"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.2090.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027463">
        <property type="entry name" value="AcrB_DN_DC_subdom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001036">
        <property type="entry name" value="Acrflvin-R"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32063">
        <property type="entry name" value="PTHR32063"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00873">
        <property type="entry name" value="ACR_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00702">
        <property type="entry name" value="ACRIFLAVINRP"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82714">
        <property type="entry name" value="SSF82714"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="346"/>
            <end position="365"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="372"/>
            <end position="392"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="398"/>
            <end position="422"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="443"/>
            <end position="463"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="475"/>
            <end position="498"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71759.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="529" mass="56141" checksum="EB2B549FE2C243F1" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAB9</accession>
    <name>A0A0M7AAB9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Prephenate dehydratase</fullName>
            <ecNumber evidence="3">4.2.1.51</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">pheA</name>
        <name evidence="11" type="ORF">LAX5112_02813</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>H(+) + prephenate = 3-phenylpyruvate + CO2 + H2O</text>
            <dbReference type="Rhea" id="RHEA:21648"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:18005"/>
            <dbReference type="ChEBI" id="CHEBI:29934"/>
            <dbReference type="EC" id="4.2.1.51"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Amino-acid biosynthesis; L-phenylalanine biosynthesis; phenylpyruvate from prephenate: step 1/1.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.51" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71412.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672352.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02813"/>
    <dbReference type="EnsemblBacteria" id="CTQ71412">
        <property type="protein sequence ID" value="CTQ71412"/>
        <property type="gene ID" value="LAX5112_02813"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00121">
        <property type="reaction ID" value="UER00345"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004106">
        <property type="term" value="F:chorismate mutase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004664">
        <property type="term" value="F:prephenate dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009094">
        <property type="term" value="P:L-phenylalanine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045865">
        <property type="entry name" value="ACT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002912">
        <property type="entry name" value="ACT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008242">
        <property type="entry name" value="Chor_mutase/pphenate_deHydtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001086">
        <property type="entry name" value="Preph_deHydtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018528">
        <property type="entry name" value="Preph_deHydtase_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00800">
        <property type="entry name" value="PDT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001500">
        <property type="entry name" value="Chor_mut_pdt_Ppr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55021">
        <property type="entry name" value="SSF55021"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51671">
        <property type="entry name" value="ACT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00857">
        <property type="entry name" value="PREPHENATE_DEHYDR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51171">
        <property type="entry name" value="PREPHENATE_DEHYDR_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="5" id="KW-0057">Aromatic amino acid biosynthesis</keyword>
    <keyword evidence="7" id="KW-0456">Lyase</keyword>
    <keyword evidence="6" id="KW-0584">Phenylalanine biosynthesis</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Prephenate dehydratase" evidence="9">
        <location>
            <begin position="6"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="domain" description="ACT" evidence="10">
        <location>
            <begin position="196"/>
            <end position="273"/>
        </location>
    </feature>
    <feature type="site" description="Essential for prephenate dehydratase activity" evidence="8">
        <location>
            <position position="174"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000913"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00013147"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023222"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR001500-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51671"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ71412.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="296" mass="32512" checksum="90F6C0E23D077DCC" modified="2015-12-09" version="1">MSNAKKIVFQGETGANSHMACRDVYPDYEAIPCATFEDCFSAMADGKADLAMIPIENSVAGRVADIHHLLPGSNLHIIGEYFMPIRFQLMAPKGTKIENLTTVQSHVHALGQCRNIIRELGLNAVVGADTAGSARQIAELGDPTHAALAPRMAADIYGLDILRKDVEDEAHNTTRFVILSRDKMEAAHNGQPVISTFIFRVRNVPAALYKALGGFATNNVNMTKLESYQLEGQFFASMFYADIEGHPNDPHVALALEELAFFCAELKIVGVYRASPFRDKIREPEANRALRPNPQS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AB19</accession>
    <name>A0A0M7AB19_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02654</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70923.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672225.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70923">
        <property type="protein sequence ID" value="CTQ70923"/>
        <property type="gene ID" value="LAX5112_02654"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ70923.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="376" mass="40146" checksum="F4ED7986C204B4BB" modified="2015-12-09" version="1">MTLTSDEITKIREVISNTDKTLEETDSGSHYQNTYTYFYVPKDFGSAATTTDDTGLGAVLRLGGYSDLEEPENANLGKSQGSLHAVQSEVYPTQHISDETSAKAHQNAPGKQTSGENNEVIKRQGILMACDGRVLLRSGEKIYVHAADQIHVQSDENIALVTVNGSIDNTSGENFTVKATKKVSMRSGVGNPDNYTARGVNTSGTKGVEIIADEGNSDVYIEGLGLFLQVNGTSTADITANNSTVMRADNFEDIWGHNTSIFRGTFFELYFGAGLSYRAAASLNIATALDVNIGLFDVGITGVEMTKTILEVKSSMFKSKNVAVEAETTATRARSDAVCVGSTATKAESEVVTASIGNVKSLIAFWEAKIASTAQI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AC30</accession>
    <name>A0A0M7AC30_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Probable multidrug resistance protein NorM</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">dinF</name>
        <name evidence="8" type="ORF">LAX5112_03003</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Multidrug efflux pump.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72002.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672500.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03003"/>
    <dbReference type="EnsemblBacteria" id="CTQ72002">
        <property type="protein sequence ID" value="CTQ72002"/>
        <property type="gene ID" value="LAX5112_03003"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015297">
        <property type="term" value="F:antiporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042910">
        <property type="term" value="F:xenobiotic transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd13136">
        <property type="entry name" value="MATE_DinF_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044644">
        <property type="entry name" value="DinF-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002528">
        <property type="entry name" value="MATE_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42893">
        <property type="entry name" value="PTHR42893"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01554">
        <property type="entry name" value="MatE"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00797">
        <property type="entry name" value="matE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="23"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="54"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="101"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="146"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="178"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="203"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="252"/>
            <end position="270"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="290"/>
            <end position="312"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="324"/>
            <end position="344"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="364"/>
            <end position="385"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="397"/>
            <end position="415"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="421"/>
            <end position="440"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003408"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00020268"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ72002.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="449" mass="48326" checksum="D86F762D7809126C" modified="2015-12-09" version="1">MSSPTSTETPAPTADVTVTHRGVLAIAVPMTLAYLSTPLLGVVDMAVIGRLGDAALIGGIALGGIIFDLVFTTFNFLRSGTTGLTAQALGARDEYEIRATLLRALVIAGIGGALVIICQVPLLMAGQWFLGGSEGVQAATTRYFDIRIYSAPFLLANYAILGWFIGLGRAGTGLMVQLFLNCLNIALSIWFVMGLGWSVEGAALATVLSEVATTVFGITIILVRPRPGDWPSPQVVFDKRLLLRMMALNRDIMIRSFALLYAFAFFMARSADQGDAVLAANAVLQKFTMIAAYFLDGLATAAEQLAGWAVGARKRKAFDRALKLTALWSFAMAALLSVFFALFGHMIIDLLTTNEDVRALSRVYLIWVILAPLLGVLAYQMDGVYIGATWSGTMRNMMLVSLAVYIAAYHALFPLMGNHGLWLAISLFLGLRGLTLLAVCQRRASETFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AC41</accession>
    <name>A0A0M7AC41_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Neu5Ac permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">siaT_20</name>
        <name evidence="6" type="ORF">LAX5112_03098</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72207.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672579.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03098"/>
    <dbReference type="EnsemblBacteria" id="CTQ72207">
        <property type="protein sequence ID" value="CTQ72207"/>
        <property type="gene ID" value="LAX5112_03098"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010656">
        <property type="entry name" value="DctM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004681">
        <property type="entry name" value="TRAP_DctM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33362">
        <property type="entry name" value="PTHR33362"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06808">
        <property type="entry name" value="DctM"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="30"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="117"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="226"/>
            <end position="249"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="269"/>
            <end position="289"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="301"/>
            <end position="318"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="324"/>
            <end position="347"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="359"/>
            <end position="381"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="401"/>
            <end position="421"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="442"/>
            <end position="470"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="482"/>
            <end position="510"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="522"/>
            <end position="543"/>
        </location>
    </feature>
    <feature type="domain" description="DctM" evidence="5">
        <location>
            <begin position="11"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="domain" description="DctM" evidence="5">
        <location>
            <begin position="218"/>
            <end position="340"/>
        </location>
    </feature>
    <feature type="domain" description="DctM" evidence="5">
        <location>
            <begin position="364"/>
            <end position="547"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="3">
        <location>
            <begin position="650"/>
            <end position="705"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF06808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ72207.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="888" mass="94746" checksum="76A473FCA1D1FB4E" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACV0</accession>
    <name>A0A0M7ACV0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="8 9">Catalase-peroxidase</fullName>
            <shortName evidence="8">CP</shortName>
            <ecNumber evidence="8 9">1.11.1.21</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">Peroxidase/catalase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8 12" type="primary">katG</name>
        <name evidence="12" type="ORF">LAX5112_03361</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 8 9">
            <text>2 H2O2 = 2 H2O + O2</text>
            <dbReference type="Rhea" id="RHEA:20309"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:16240"/>
            <dbReference type="EC" id="1.11.1.21"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8 9">
            <text>AH2 + H2O2 = A + 2 H2O</text>
            <dbReference type="Rhea" id="RHEA:30275"/>
            <dbReference type="ChEBI" id="CHEBI:13193"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16240"/>
            <dbReference type="ChEBI" id="CHEBI:17499"/>
            <dbReference type="EC" id="1.11.1.21"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="8">
            <name>heme b</name>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
        </cofactor>
        <text evidence="8">Binds 1 heme b (iron(II)-protoporphyrin IX) group per dimer.</text>
    </comment>
    <comment type="subunit">
        <text evidence="8">Homodimer or homotetramer.</text>
    </comment>
    <comment type="PTM">
        <text evidence="8">Formation of the three residue Trp-Tyr-Met cross-link is important for the catalase, but not the peroxidase activity of the enzyme.</text>
    </comment>
    <comment type="similarity">
        <text evidence="8 9">Belongs to the peroxidase family. Peroxidase/catalase subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="1.11.1.21" evidence="8 9"/>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72908.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672773.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03361"/>
    <dbReference type="EnsemblBacteria" id="CTQ72908">
        <property type="protein sequence ID" value="CTQ72908"/>
        <property type="gene ID" value="LAX5112_03361"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004096">
        <property type="term" value="F:catalase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042744">
        <property type="term" value="P:hydrogen peroxide catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006979">
        <property type="term" value="P:response to oxidative stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01961">
        <property type="entry name" value="Catal_peroxid"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000763">
        <property type="entry name" value="Catalase_peroxidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002016">
        <property type="entry name" value="Haem_peroxidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010255">
        <property type="entry name" value="Haem_peroxidase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019794">
        <property type="entry name" value="Peroxidases_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30555">
        <property type="entry name" value="PTHR30555"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00141">
        <property type="entry name" value="peroxidase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00460">
        <property type="entry name" value="BPEROXIDASE"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00458">
        <property type="entry name" value="PEROXIDASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48113">
        <property type="entry name" value="SSF48113"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00198">
        <property type="entry name" value="cat_per_HPI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00436">
        <property type="entry name" value="PEROXIDASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50873">
        <property type="entry name" value="PEROXIDASE_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 8 9" id="KW-0349">Heme</keyword>
    <keyword evidence="7 8 9" id="KW-0376">Hydrogen peroxide</keyword>
    <keyword evidence="6 8 9" id="KW-0408">Iron</keyword>
    <keyword evidence="4 8 9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5 8 9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2 8 9" id="KW-0575">Peroxidase</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PEROXIDASE_4" evidence="11">
        <location>
            <begin position="131"/>
            <end position="425"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="265"/>
            <end position="288"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="8">
        <location>
            <position position="98"/>
        </location>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="8">
        <location>
            <position position="266"/>
        </location>
        <ligand>
            <name>heme b</name>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <feature type="site" description="Transition state stabilizer" evidence="8">
        <location>
            <position position="94"/>
        </location>
    </feature>
    <feature type="cross-link" description="Tryptophyl-tyrosyl-methioninium (Tyr-Met) (with Trp-97)" evidence="8">
        <location>
            <begin position="225"/>
            <end position="251"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001378"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023324"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU003451"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50873"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ72908.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="723" mass="79642" checksum="6D7CF5C8B157F997" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AD75</accession>
    <name>A0A0M7AD75_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">HPr kinase/phosphorylase</fullName>
            <ecNumber evidence="2">2.7.11.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">hprK</name>
        <name evidence="2" type="ORF">LAX5112_02910</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.7.11.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71693.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672415.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02910"/>
    <dbReference type="EnsemblBacteria" id="CTQ71693">
        <property type="protein sequence ID" value="CTQ71693"/>
        <property type="gene ID" value="LAX5112_02910"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006109">
        <property type="term" value="P:regulation of carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011104">
        <property type="entry name" value="Hpr_kin/Pase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07475">
        <property type="entry name" value="Hpr_kinase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Hpr_kinase_C" evidence="1">
        <location>
            <begin position="4"/>
            <end position="129"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71693.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="155" mass="17019" checksum="7D5E58F6C88B7532" modified="2015-12-09" version="1">MTANNIHANCLVVGTKGLLIRGKSGSGKSSLSDTILEAARSRGHFGALVADDRVLLNGETGQLLAEPPKVLEGMMEVRGTGIVRARFLPHAQVHLIVDLCEKVAVERLPEEPYNKETVLGVVCPLLRCPEDDILSSVRLIRWAFRHLYSDSPDYF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AED7</accession>
    <name>A0A0M7AED7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03290</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72766.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03290"/>
    <dbReference type="EnsemblBacteria" id="CTQ72766">
        <property type="protein sequence ID" value="CTQ72766"/>
        <property type="gene ID" value="LAX5112_03290"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025562">
        <property type="entry name" value="Tae4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14113">
        <property type="entry name" value="Tae4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ72766.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="163" mass="17854" checksum="C3CB93818E1ACD88" modified="2015-12-09" version="1">MVLRFADLRNNYPVPDPEKSDEENRRAFYNTLGGQWPTLVNAEHYKNTCATRLSVALKKSGASISDTYKEAIEGNGSPLIIKVKTMSEYLKATVGNSYWGMSKNPGTTIGPGDVPGVTGILVYHVAWSNATGHFDLWTGSDFLGSGNFSDIKDGFALELWKIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEE1</accession>
    <name>A0A0M7AEE1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">NADH:ubiquinone reductase (H(+)-translocating)</fullName>
            <ecNumber evidence="3">7.1.1.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="primary">nuoL</name>
        <name evidence="14" type="ORF">LAX5112_03478</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 9">Membrane</location>
            <topology evidence="1 9">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Mitochondrion inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EC" id="7.1.1.2" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73259.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672869.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03478"/>
    <dbReference type="EnsemblBacteria" id="CTQ73259">
        <property type="protein sequence ID" value="CTQ73259"/>
        <property type="gene ID" value="LAX5112_03478"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008137">
        <property type="term" value="F:NADH dehydrogenase (ubiquinone) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042773">
        <property type="term" value="P:ATP synthesis coupled electron transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010934">
        <property type="entry name" value="NADH_DH_su5_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018393">
        <property type="entry name" value="NADHpl_OxRdtase_5_subgr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001750">
        <property type="entry name" value="ND/Mrp_mem"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003945">
        <property type="entry name" value="NU5C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001516">
        <property type="entry name" value="Proton_antipo_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42829">
        <property type="entry name" value="PTHR42829"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06455">
        <property type="entry name" value="NADH5_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00361">
        <property type="entry name" value="Proton_antipo_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00662">
        <property type="entry name" value="Proton_antipo_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01974">
        <property type="entry name" value="NDH_I_L"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="5" id="KW-0999">Mitochondrion inner membrane</keyword>
    <keyword evidence="14" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 9 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 10" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="30"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="83"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="114"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="137"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="177"/>
            <end position="198"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="218"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="260"/>
            <end position="278"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="290"/>
            <end position="311"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="318"/>
            <end position="344"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="350"/>
            <end position="367"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="388"/>
            <end position="414"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="434"/>
            <end position="458"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="479"/>
            <end position="501"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="537"/>
            <end position="557"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="639"/>
            <end position="659"/>
        </location>
    </feature>
    <feature type="domain" description="Proton_antipo_N" evidence="12">
        <location>
            <begin position="65"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="domain" description="Proton_antipo_M" evidence="11">
        <location>
            <begin position="131"/>
            <end position="426"/>
        </location>
    </feature>
    <feature type="domain" description="NADH5_C" evidence="13">
        <location>
            <begin position="531"/>
            <end position="653"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012944"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022792"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU000320"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF00361"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF00662"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF06455"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="CTQ73259.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="669" mass="73596" checksum="E1B8FD0268ADD59E" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AF55</accession>
    <name>A0A0M7AF55_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Uroporphyrinogen-III C-methyltransferase</fullName>
            <ecNumber evidence="2">2.1.1.107</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">cobA</name>
        <name evidence="10" type="ORF">LAX5112_03653</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="7">Porphyrin-containing compound metabolism; siroheme biosynthesis; precorrin-2 from uroporphyrinogen III: step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 8">Belongs to the precorrin methyltransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.107" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73775.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03653"/>
    <dbReference type="EnsemblBacteria" id="CTQ73775">
        <property type="protein sequence ID" value="CTQ73775"/>
        <property type="gene ID" value="LAX5112_03653"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00262">
        <property type="reaction ID" value="UER00211"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004851">
        <property type="term" value="F:uroporphyrin-III C-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019354">
        <property type="term" value="P:siroheme biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd11642">
        <property type="entry name" value="SUMT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.950.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1010.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000878">
        <property type="entry name" value="4pyrrol_Mease"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035996">
        <property type="entry name" value="4pyrrol_Methylase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014777">
        <property type="entry name" value="4pyrrole_Mease_sub1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014776">
        <property type="entry name" value="4pyrrole_Mease_sub2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006366">
        <property type="entry name" value="CobA/CysG_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003043">
        <property type="entry name" value="Uropor_MeTrfase_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00590">
        <property type="entry name" value="TP_methylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53790">
        <property type="entry name" value="SSF53790"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01469">
        <property type="entry name" value="cobA_cysG_Cterm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00840">
        <property type="entry name" value="SUMT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 8 10" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="6" id="KW-0627">Porphyrin biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="4 8 10" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="TP_methylase" evidence="9">
        <location>
            <begin position="16"/>
            <end position="226"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005879"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012162"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00025705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU003960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF00590"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ73775.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="282" mass="29429" checksum="EAB42C53A0FAFCD6" modified="2015-12-09" version="1">MTLPAQSLPEFEAGWVWLAGAGPGDPGLLTLHAVNGLRQADVVVYDALVDQSILSWARPGAVLDYAGKRGGKPSPKQRDITLKLIDYARAGKRVLRLKGGDPFVFGRGGEEALGLVEAGVHFRIIPGITAGIGGLAYAGIPATHRDCNQAVTFLTGHDQTGLTPDAINWEGIAQGSPVIVMYMAMKHLETIADKLIAGGRSVDEPVGIVCNGSLAGQEVLETTLGKCAEEAKQAGLSPPAIVCVGEVVRLRAGLDWLGAMSGKVLTPDPLGLREATRQADAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFX5</accession>
    <name>A0A0M7AFX5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Urease accessory protein UreD</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3 4" type="primary">ureD</name>
        <name evidence="4" type="ORF">LAX5112_03742</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">UreD, UreF and UreG form a complex that acts as a GTP-hydrolysis-dependent molecular chaperone, activating the urease apoprotein by helping to assemble the nickel containing metallocenter of UreC. The UreE protein probably delivers the nickel.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the UreD family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74055.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673068.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03742"/>
    <dbReference type="EnsemblBacteria" id="CTQ74055">
        <property type="protein sequence ID" value="CTQ74055"/>
        <property type="gene ID" value="LAX5112_03742"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016151">
        <property type="term" value="F:nickel cation binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006807">
        <property type="term" value="P:nitrogen compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01384">
        <property type="entry name" value="UreD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002669">
        <property type="entry name" value="UreD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33643">
        <property type="entry name" value="PTHR33643"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01774">
        <property type="entry name" value="UreD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3" id="KW-0143">Chaperone</keyword>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3" id="KW-0996">Nickel insertion</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007177"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01384"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ74055.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="284" mass="30483" checksum="2D339BC856C12F89" modified="2015-12-09" version="1">MYDAATASEIGKTAPAMQRVRGTARVAFVNTAGQTRLKDLFQSGSAKVRLPKVYGEPATTVLINTAGGLTGGDRMDYDIAIGADAHAIVTTQTAERAYRSLGTSAEVTGHLSVGAEATLEWLPQETILFESSSVSRRISADLTGSARLLILESVVLGRAAMGEQLTRVFFKDSWRIRRDGKLVFADDLRLNGDPSDFFSGPATGQGAKAMATLLDCAPDAEDRLDNARSCLENASSGSVQAAASARNGHLILRFVATDSRALRLSLMAFLETYRSARLPRVWYC</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AG07</accession>
    <name>A0A0M7AG07_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Urease accessory protein UreG</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4 6" type="primary">ureG</name>
        <name evidence="6" type="ORF">LAX5112_03753</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Homodimer. UreD, UreF and UreG form a complex that acts as a GTP-hydrolysis-dependent molecular chaperone, activating the urease apoprotein by helping to assemble the nickel containing metallocenter of UreC. The UreE protein probably delivers the nickel.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the SIMIBI class G3E GTPase family. UreG subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74085.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673076.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03753"/>
    <dbReference type="EnsemblBacteria" id="CTQ74085">
        <property type="protein sequence ID" value="CTQ74085"/>
        <property type="gene ID" value="LAX5112_03753"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016151">
        <property type="term" value="F:nickel cation binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006807">
        <property type="term" value="P:nitrogen compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01389">
        <property type="entry name" value="UreG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003495">
        <property type="entry name" value="CobW/HypB/UreG_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004400">
        <property type="entry name" value="UreG"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31715">
        <property type="entry name" value="PTHR31715"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02492">
        <property type="entry name" value="cobW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00101">
        <property type="entry name" value="ureG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0143">Chaperone</keyword>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="3 4" id="KW-0996">Nickel insertion</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="cobW" evidence="5">
        <location>
            <begin position="10"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="14"/>
            <end position="21"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005732"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022988"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01389"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF02492"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ74085.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="203" mass="21676" checksum="A3A5C3DC111A4391" modified="2015-12-09" version="1">MKSQNGPLRVGIGGPVGAGKTTLTDKLCKAMRERYSLAVITNDIYTSEDAEALMRSQALTSDRIRGVETGGCPHTAIREDASINLAAVKDLNDKIPDLDLILIESGGDNLAATFSPELADLTIYVIDVAAGEEIPRKGGPGITRSDLLVINKTDLAPYVGADLSVMDRDAAKMRKTRPFVFANMRAGDGVDKIVEFIIEKGGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGI6</accession>
    <name>A0A0M7AGI6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Lectin-like protein BA14k</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">LAX5112_03339</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Has immunoglobulin-binding and hemagglutination properties, and can bind to mannose. Essential for virulence. May be involved in LPS biosynthesis or polysaccharide transport.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the BA14k family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72863.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03339"/>
    <dbReference type="EnsemblBacteria" id="CTQ72863">
        <property type="protein sequence ID" value="CTQ72863"/>
        <property type="gene ID" value="LAX5112_03339"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030246">
        <property type="term" value="F:carbohydrate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012413">
        <property type="entry name" value="BA14K"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07886">
        <property type="entry name" value="BA14K"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0430">Lectin</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0843">Virulence</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004162"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010270"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00020552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022734"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023026"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00025321"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ72863.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="184" mass="20195" checksum="1BFBF15911B0A20A" modified="2015-12-09" version="1">MTGRSLKEITDSMRLQTRAAMRLAAAGVFGLAVIAGTALVSGSGAAKADSIYIGSGGIGFTFGTGGYRGGAYYGGRGGAYYGGRGYYGGRGYYGGGYYRPHRPYYRPYYKRPYRYRSRVRINPPLYIAPPVVVHPGAPQRVPYTKTGLAPFTPEYYAYCARKFKSFNPNTGTYLAYSGKYRFCR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGL5</accession>
    <name>A0A0M7AGL5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Rhodanese-like domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03353</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72893.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672766.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03353"/>
    <dbReference type="EnsemblBacteria" id="CTQ72893">
        <property type="protein sequence ID" value="CTQ72893"/>
        <property type="gene ID" value="LAX5112_03353"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.250.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001763">
        <property type="entry name" value="Rhodanese-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036873">
        <property type="entry name" value="Rhodanese-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00581">
        <property type="entry name" value="Rhodanese"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52821">
        <property type="entry name" value="SSF52821"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50206">
        <property type="entry name" value="RHODANESE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809313" evidence="1">
        <location>
            <begin position="26"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="domain" description="Rhodanese" evidence="2">
        <location>
            <begin position="85"/>
            <end position="188"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50206"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ72893.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="191" mass="20263" checksum="FFF78902948E10A3" modified="2015-12-09" version="1">MRKGFLSLSAAFLMLAMAGSGPAFAEGDLKISGDDTVVTIQTDEGAVDITRSKTEAALIGGVLQPMVPLPGVTPVGELEVIDALKSGTAKVVDMRTMEWRTQATIPGSIHIPYTEVAMRLDELGCEGEQGAWECAAADNVIAFCNGPACPQSPVAIKAMAREGYPVDKISYYRGGMQDWMVLGLTTAEDMF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGW6</accession>
    <name>A0A0M7AGW6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Transcription termination factor Rho</fullName>
            <ecNumber evidence="8">3.6.4.-</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">ATP-dependent helicase Rho</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8 11" type="primary">rho</name>
        <name evidence="11" type="ORF">LAX5112_03776</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template.</text>
    </comment>
    <comment type="subunit">
        <text evidence="8">Homohexamer. The homohexamer assembles into an open ring structure.</text>
    </comment>
    <comment type="similarity">
        <text evidence="8 9">Belongs to the Rho family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.-" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74149.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008191409.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03776"/>
    <dbReference type="EnsemblBacteria" id="CTQ74149">
        <property type="protein sequence ID" value="CTQ74149"/>
        <property type="gene ID" value="LAX5112_03776"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008186">
        <property type="term" value="F:ATP-dependent activity, acting on RNA"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004386">
        <property type="term" value="F:helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006353">
        <property type="term" value="P:DNA-templated transcription, termination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd04459">
        <property type="entry name" value="Rho_CSD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01128">
        <property type="entry name" value="rho_factor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01884">
        <property type="entry name" value="Rho"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000194">
        <property type="entry name" value="ATPase_F1/V1/A1_a/bsu_nucl-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011129">
        <property type="entry name" value="CSD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041703">
        <property type="entry name" value="Rho_factor_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011112">
        <property type="entry name" value="Rho_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036269">
        <property type="entry name" value="Rho_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011113">
        <property type="entry name" value="Rho_RNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004665">
        <property type="entry name" value="Term_rho"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46425">
        <property type="entry name" value="PTHR46425"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00006">
        <property type="entry name" value="ATP-synt_ab"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07498">
        <property type="entry name" value="Rho_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07497">
        <property type="entry name" value="Rho_RNA_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00357">
        <property type="entry name" value="CSP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00959">
        <property type="entry name" value="Rho_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF68912">
        <property type="entry name" value="SSF68912"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00767">
        <property type="entry name" value="rho"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51856">
        <property type="entry name" value="RHO_RNA_BD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 8" id="KW-0347">Helicase</keyword>
    <keyword evidence="8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8 9" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="7 8" id="KW-0804">Transcription</keyword>
    <keyword evidence="6 8" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="1 8" id="KW-0806">Transcription termination</keyword>
    <feature type="domain" description="Rho RNA-BD" evidence="10">
        <location>
            <begin position="51"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="172"/>
            <end position="177"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="184"/>
            <end position="189"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="215"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022472"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01203"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51856"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ74149.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="421" mass="47385" checksum="0BAB20272F649894" modified="2015-12-09" version="1">MREMKLKDLKQKTPTELLQKAEELEVENASTMRKQELMFAILKNLAAQDVEIIGEGVVEVLQDGFGFLRSPDANYLPGPDDIYVSPSQIRRFSLRTGDTVEGQIRSPKEGERYFALLKVNTINFEDPDKARHKVHFDNLTPLYPDEKFKMEIEDPTIKDLSSRVIDLVAPLGKGQRALITAPPRTGKTVFLQNIAKSITNNHPECYLIVLLIDERPEEVTDMQRTVDGEVVSSTFDEPASRHVQVAEMVIEKAKRLTEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIILDRKISDKRVYPAIDIQRSGTRKEELLVPPERLKKTFVLRRILNPMGTVDAVEFLLDKLKQTKSNDDFFDSMNT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AH07</accession>
    <name>A0A0M7AH07_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">High-affinity zinc uptake system membrane protein ZnuB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">znuB</name>
        <name evidence="8" type="ORF">LAX5112_03847</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cell membrane</location>
            <topology evidence="6">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the ABC-3 integral membrane protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74388.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673162.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03847"/>
    <dbReference type="EnsemblBacteria" id="CTQ74388">
        <property type="protein sequence ID" value="CTQ74388"/>
        <property type="gene ID" value="LAX5112_03847"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3470.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037294">
        <property type="entry name" value="ABC_BtuC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001626">
        <property type="entry name" value="ABC_TroCD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30477">
        <property type="entry name" value="PTHR30477"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00950">
        <property type="entry name" value="ABC-3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81345">
        <property type="entry name" value="SSF81345"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="6"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="41"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="86"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="129"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="171"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="216"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="242"/>
            <end position="259"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ74388.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="274" mass="28714" checksum="8118A5FDD6C0573C" modified="2015-12-09" version="1">MLDDFFTRALIAGIGVALVAGPLGCFVVWRRMAYFGDTLAHAALLGVALAFLLDVNTTLAVAAASVVLSMLLLALRQKGNLPSDALLGLLSHSALAIGLVCMAFMTWVNFDLQGILFGDILSVTRLDIAIIYGGGAIVLAGLIWIWRSLFAATVSSDLAGAEGLRPDFAELVFMLLTAIVIAIALKVVGALLITALLIIPAAAVRRLSASPEQMAVFASLAGIIAVVAGLYSSLYYDTPSGPSIVVAAMLLFVLSLFPVRRLIKKLTAENRGGI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AH23</accession>
    <name>A0A0M7AH23_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03631</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73706.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672980.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ73706">
        <property type="protein sequence ID" value="CTQ73706"/>
        <property type="gene ID" value="LAX5112_03631"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009506">
        <property type="entry name" value="DUF1127"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06568">
        <property type="entry name" value="DUF1127"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ73706.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="78" mass="9213" checksum="93E3DCA774499A88" modified="2015-12-09" version="1">MSLEIDTVFRRRAHNRSLFLTAIRTLAASVQLYLRRRSTERALARLSNQELDDIGLVRTNRGYRELHHDRLGASYWND</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AH30</accession>
    <name>A0A0M7AH30_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 9">DNA mismatch repair protein MutS</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9 12" type="primary">mutS</name>
        <name evidence="12" type="ORF">LAX5112_03797</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8 9">This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 9 10">Belongs to the DNA mismatch repair MutS family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74209.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673110.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03797"/>
    <dbReference type="EnsemblBacteria" id="CTQ74209">
        <property type="protein sequence ID" value="CTQ74209"/>
        <property type="gene ID" value="LAX5112_03797"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140664">
        <property type="term" value="F:ATP-dependent DNA damage sensor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003684">
        <property type="term" value="F:damaged DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030983">
        <property type="term" value="F:mismatched DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006298">
        <property type="term" value="P:mismatch repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1170.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00096">
        <property type="entry name" value="MutS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005748">
        <property type="entry name" value="DNA_mismatch_repair_MutS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007695">
        <property type="entry name" value="DNA_mismatch_repair_MutS-lik_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017261">
        <property type="entry name" value="DNA_mismatch_repair_MutS/MSH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000432">
        <property type="entry name" value="DNA_mismatch_repair_MutS_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007861">
        <property type="entry name" value="DNA_mismatch_repair_MutS_clamp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007696">
        <property type="entry name" value="DNA_mismatch_repair_MutS_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016151">
        <property type="entry name" value="DNA_mismatch_repair_MutS_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036187">
        <property type="entry name" value="DNA_mismatch_repair_MutS_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007860">
        <property type="entry name" value="DNA_mmatch_repair_MutS_con_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036678">
        <property type="entry name" value="MutS_con_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045076">
        <property type="entry name" value="MutS_family"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11361">
        <property type="entry name" value="PTHR11361"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01624">
        <property type="entry name" value="MutS_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05188">
        <property type="entry name" value="MutS_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05192">
        <property type="entry name" value="MutS_III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05190">
        <property type="entry name" value="MutS_IV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00488">
        <property type="entry name" value="MutS_V"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF037677">
        <property type="entry name" value="DNA_mis_repair_Msh6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00534">
        <property type="entry name" value="MUTSac"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00533">
        <property type="entry name" value="MUTSd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48334">
        <property type="entry name" value="SSF48334"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53150">
        <property type="entry name" value="SSF53150"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55271">
        <property type="entry name" value="SSF55271"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01070">
        <property type="entry name" value="mutS1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00486">
        <property type="entry name" value="DNA_MISMATCH_REPAIR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 9 10" id="KW-0227">DNA damage</keyword>
    <keyword evidence="7 9 10" id="KW-0234">DNA repair</keyword>
    <keyword evidence="6 9 10" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="3 9 10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DNA_MISMATCH_REPAIR_2" evidence="11">
        <location>
            <begin position="728"/>
            <end position="744"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="654"/>
            <end position="661"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006271"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00021982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00024647"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00096"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU003756"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS00486"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ74209.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="906" mass="97375" checksum="CA332256BA97D38E" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AH47</accession>
    <name>A0A0M7AH47_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">1-acyl-sn-glycerol-3-phosphate acyltransferase</fullName>
            <ecNumber evidence="4">2.3.1.51</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">plsC</name>
        <name evidence="4" type="ORF">LAX5112_03711</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.3.1.51" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ73967.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673048.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03711"/>
    <dbReference type="EnsemblBacteria" id="CTQ73967">
        <property type="protein sequence ID" value="CTQ73967"/>
        <property type="gene ID" value="LAX5112_03711"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003841">
        <property type="term" value="F:1-acylglycerol-3-phosphate O-acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002123">
        <property type="entry name" value="Plipid/glycerol_acylTrfase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01553">
        <property type="entry name" value="Acyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00563">
        <property type="entry name" value="PlsC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="domain" description="PlsC" evidence="3">
        <location>
            <begin position="71"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="236"/>
            <end position="255"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00563"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ73967.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="255" mass="29070" checksum="9811E9FBB0F24B6F" modified="2015-12-09" version="1">MLVLRSTVFQILFYSVTLVQMLLYLPVLLLPRKWGWWIPHVWSKSLIFLMKYVAGLSVEIRGRENLPSVGYIAAMKHQSAWETVGLIPLFPRPAFILKRELNWLPFFGWYTMKFDQIPINRGKRSEALAAMMEAAREKIADKRQILIFPEGTRRPAGSEPKYKFGIAHLYKNLECPVVPIAHNAGVYWPRASFMVHPGTVIVEILPPIQPGLEAQELYDKMIDEIETSSNRLIEEARSASKPSPVLKDIPVSTGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHG7</accession>
    <name>A0A0M7AHG7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Glutamate 5-kinase</fullName>
            <ecNumber evidence="8">2.7.2.11</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">Gamma-glutamyl kinase</fullName>
            <shortName evidence="8">GK</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8 10" type="primary">proB</name>
        <name evidence="10" type="ORF">LAX5112_03615</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>ATP + L-glutamate = ADP + L-glutamyl 5-phosphate</text>
            <dbReference type="Rhea" id="RHEA:14877"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:58274"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.2.11"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="8">Amino-acid biosynthesis; L-proline biosynthesis; L-glutamate 5-semialdehyde from L-glutamate: step 1/2.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the glutamate 5-kinase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.7.2.11" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73660.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672967.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03615"/>
    <dbReference type="EnsemblBacteria" id="CTQ73660">
        <property type="protein sequence ID" value="CTQ73660"/>
        <property type="gene ID" value="LAX5112_03615"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00098">
        <property type="reaction ID" value="UER00359"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004349">
        <property type="term" value="F:glutamate 5-kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055129">
        <property type="term" value="P:L-proline biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd04242">
        <property type="entry name" value="AAK_G5K_ProB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.130.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1160.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00456">
        <property type="entry name" value="ProB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036393">
        <property type="entry name" value="AceGlu_kinase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001048">
        <property type="entry name" value="Asp/Glu/Uridylate_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041739">
        <property type="entry name" value="G5K_ProB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001057">
        <property type="entry name" value="Glu/AcGlu_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011529">
        <property type="entry name" value="Glu_5kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005715">
        <property type="entry name" value="Glu_5kinase/COase_Synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019797">
        <property type="entry name" value="Glutamate_5-kinase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002478">
        <property type="entry name" value="PUA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015947">
        <property type="entry name" value="PUA-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036974">
        <property type="entry name" value="PUA_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00696">
        <property type="entry name" value="AA_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01472">
        <property type="entry name" value="PUA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000729">
        <property type="entry name" value="GK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00474">
        <property type="entry name" value="GLU5KINASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM00359">
        <property type="entry name" value="PUA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53633">
        <property type="entry name" value="SSF53633"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88697">
        <property type="entry name" value="SSF88697"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01027">
        <property type="entry name" value="proB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00902">
        <property type="entry name" value="GLUTAMATE_5_KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 8" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="7 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 8" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 8 10" id="KW-0418">Kinase</keyword>
    <keyword evidence="5 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3 8" id="KW-0641">Proline biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8 10" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PUA" evidence="9">
        <location>
            <begin position="281"/>
            <end position="363"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="16"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="55"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="142"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="154"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="174"/>
            <end position="175"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022650"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00456"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="SMART" id="SM00359"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ73660.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="379" mass="39497" checksum="ECD6AE6EF22F68D8" modified="2015-12-09" version="1">MSAQRSLKNHSRIVVKIGSALLVGNGALRKDWLEALVADVVDLIDAGGEVLLVSSGSIALGRGILGLPNGPLKLEESQAAAATGQIALAKAYAEALDAHNRRAGQILLTLGDTEQRRRYLNARATIGTLLKLGAVPIINENDSVATSEIRYGDNDRLAARVATMASADCLVLLSDIDGLYTAPPHLDPSAVFLPEVTRITPEIEAMAGSAGSELSRGGMKTKIDAGKIATAAGTTMVITSGKELNPLKRLNEGARATWFPALATPASARKAWIGGTLEPRGEIVLDAGAVRALKSGKSLLPAGVTSVSGQFSRGDAVKILAPDGAVAGRGLIAYDMDEAQLIAGRNSREIEAIVGYPGRAEMIHRDDLVLEDGFLNGTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="32" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHN6</accession>
    <name>A0A0M7AHN6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Bifunctional purine biosynthesis protein PurH</fullName>
        </recommendedName>
        <domain>
            <recommendedName>
                <fullName evidence="8">Phosphoribosylaminoimidazolecarboxamide formyltransferase</fullName>
                <ecNumber evidence="8">2.1.2.3</ecNumber>
            </recommendedName>
            <alternativeName>
                <fullName evidence="8">AICAR transformylase</fullName>
            </alternativeName>
        </domain>
        <domain>
            <recommendedName>
                <fullName evidence="8">IMP cyclohydrolase</fullName>
                <ecNumber evidence="8">3.5.4.10</ecNumber>
            </recommendedName>
            <alternativeName>
                <fullName evidence="8">ATIC</fullName>
            </alternativeName>
            <alternativeName>
                <fullName evidence="8">IMP synthase</fullName>
            </alternativeName>
            <alternativeName>
                <fullName evidence="8">Inosinicase</fullName>
            </alternativeName>
        </domain>
    </protein>
    <gene>
        <name evidence="8 10" type="primary">purH</name>
        <name evidence="10" type="ORF">LAX5112_03696</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>(6S)-10-formyltetrahydrofolate + 5-amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamide = (6S)-5,6,7,8-tetrahydrofolate + 5-formamido-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide</text>
            <dbReference type="Rhea" id="RHEA:22192"/>
            <dbReference type="ChEBI" id="CHEBI:57453"/>
            <dbReference type="ChEBI" id="CHEBI:57454"/>
            <dbReference type="ChEBI" id="CHEBI:58467"/>
            <dbReference type="ChEBI" id="CHEBI:58475"/>
            <dbReference type="EC" id="2.1.2.3"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>H2O + IMP = 5-formamido-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide</text>
            <dbReference type="Rhea" id="RHEA:18445"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:58053"/>
            <dbReference type="ChEBI" id="CHEBI:58467"/>
            <dbReference type="EC" id="3.5.4.10"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 8">Purine metabolism; IMP biosynthesis via de novo pathway; 5-formamido-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide (10-formyl THF route): step 1/1.</text>
    </comment>
    <comment type="pathway">
        <text evidence="1 8">Purine metabolism; IMP biosynthesis via de novo pathway; IMP from 5-formamido-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide: step 1/1.</text>
    </comment>
    <comment type="domain">
        <text evidence="8">The IMP cyclohydrolase activity resides in the N-terminal region.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 8">Belongs to the PurH family.</text>
    </comment>
    <dbReference type="EC" id="2.1.2.3" evidence="8"/>
    <dbReference type="EC" id="3.5.4.10" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ73926.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673037.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03696"/>
    <dbReference type="EnsemblBacteria" id="CTQ73926">
        <property type="protein sequence ID" value="CTQ73926"/>
        <property type="gene ID" value="LAX5112_03696"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00074">
        <property type="reaction ID" value="UER00133"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003937">
        <property type="term" value="F:IMP cyclohydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004643">
        <property type="term" value="F:phosphoribosylaminoimidazolecarboxamide formyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006189">
        <property type="term" value="P:'de novo' IMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.140.20">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1380">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00139">
        <property type="entry name" value="PurH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024051">
        <property type="entry name" value="AICAR_Tfase_dup_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016193">
        <property type="entry name" value="Cytidine_deaminase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011607">
        <property type="entry name" value="MGS-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036914">
        <property type="entry name" value="MGS-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002695">
        <property type="entry name" value="PurH-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11692">
        <property type="entry name" value="PTHR11692"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01808">
        <property type="entry name" value="AICARFT_IMPCHas"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02142">
        <property type="entry name" value="MGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000414">
        <property type="entry name" value="AICARFT_IMPCHas"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00798">
        <property type="entry name" value="AICARFT_IMPCHas"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00851">
        <property type="entry name" value="MGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52335">
        <property type="entry name" value="SSF52335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53927">
        <property type="entry name" value="SSF53927"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00355">
        <property type="entry name" value="purH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51855">
        <property type="entry name" value="MGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7 8" id="KW-0511">Multifunctional enzyme</keyword>
    <keyword evidence="5 8" id="KW-0658">Purine biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="MGS-like" evidence="9">
        <location>
            <begin position="8"/>
            <end position="158"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004844"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004954"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007667"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023268"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00139"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51855"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ73926.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="538" mass="56649" checksum="78EE379DABD5BA61" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHW3</accession>
    <name>A0A0M7AHW3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Corrinoid adenosyltransferase</fullName>
            <ecNumber evidence="4">2.5.1.17</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">Cob(II)alamin adenosyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="4">Cob(II)yrinic acid a,c-diamide adenosyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="4">Cobinamide/cobalamin adenosyltransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6" type="primary">yvqK</name>
        <name evidence="6" type="ORF">LAX5112_03734</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>2 ATP + 2 cob(II)alamin + reduced [electron-transfer flavoprotein] = 2 adenosylcob(III)alamin + 3 H(+) + oxidized [electron-transfer flavoprotein] + 2 triphosphate</text>
            <dbReference type="Rhea" id="RHEA:28671"/>
            <dbReference type="Rhea" id="RHEA-COMP:10685"/>
            <dbReference type="Rhea" id="RHEA-COMP:10686"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16304"/>
            <dbReference type="ChEBI" id="CHEBI:18036"/>
            <dbReference type="ChEBI" id="CHEBI:18408"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
            <dbReference type="ChEBI" id="CHEBI:58307"/>
            <dbReference type="EC" id="2.5.1.17"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>2 ATP + 2 cob(II)yrinate a,c diamide + reduced [electron-transfer flavoprotein] = 2 adenosylcob(III)yrinate a,c-diamide + 3 H(+) + oxidized [electron-transfer flavoprotein] + 2 triphosphate</text>
            <dbReference type="Rhea" id="RHEA:11528"/>
            <dbReference type="Rhea" id="RHEA-COMP:10685"/>
            <dbReference type="Rhea" id="RHEA-COMP:10686"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:18036"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
            <dbReference type="ChEBI" id="CHEBI:58307"/>
            <dbReference type="ChEBI" id="CHEBI:58503"/>
            <dbReference type="ChEBI" id="CHEBI:58537"/>
            <dbReference type="EC" id="2.5.1.17"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="4">Cofactor biosynthesis; adenosylcobalamin biosynthesis; adenosylcobalamin from cob(II)yrinate a,c-diamide: step 2/7.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the Cob(I)alamin adenosyltransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.17" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74032.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673064.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03734"/>
    <dbReference type="EnsemblBacteria" id="CTQ74032">
        <property type="protein sequence ID" value="CTQ74032"/>
        <property type="gene ID" value="LAX5112_03734"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00148">
        <property type="reaction ID" value="UER00233"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008817">
        <property type="term" value="F:cob(I)yrinic acid a,c-diamide adenosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009236">
        <property type="term" value="P:cobalamin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1200.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016030">
        <property type="entry name" value="CblAdoTrfase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036451">
        <property type="entry name" value="CblAdoTrfase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029499">
        <property type="entry name" value="PduO-typ"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12213">
        <property type="entry name" value="PTHR12213"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01923">
        <property type="entry name" value="Cob_adeno_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89028">
        <property type="entry name" value="SSF89028"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00636">
        <property type="entry name" value="PduO_Nterm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0169">Cobalamin biosynthesis</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 4 6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Cob_adeno_trans" evidence="5">
        <location>
            <begin position="7"/>
            <end position="174"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU366026"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF01923"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ74032.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="191" mass="21066" checksum="BCC66EF9C1C989C6" modified="2015-12-09" version="1">MVVLNKIYTKTGDNGTTALGSGERRPKYDLRIDAYGTVDETNAIVGMARLHTASVVPDIDAVLNRIQNDLFDLGADLATPETDQDLGYEPLRITDGQVSAIEEAIDTLNADLSPLRSFVLPGGSAASAHLHLARTVSRRAERLMVELADRETINQAGIRYMNRLSDYFFVASRYLNNKGEEDVLWVPGKNR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AI00</accession>
    <name>A0A0M7AI00_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03821</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74277.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74277">
        <property type="protein sequence ID" value="CTQ74277"/>
        <property type="gene ID" value="LAX5112_03821"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ74277.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="56" mass="6594" checksum="C18483ADD1AAD52A" modified="2015-12-09" version="1">MAFRSVSNFFDQIGQAQRMSADYNRMRQMSPESLSRMGIERNDIANHLYNKYFGGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJ42</accession>
    <name>A0A0M7AJ42_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Ribosomal RNA large subunit methyltransferase J</fullName>
            <ecNumber evidence="1">2.1.1.266</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="1">23S rRNA (adenine(2030)-N6)-methyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="1">23S rRNA m6A2030 methyltransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="1 2" type="primary">rlmJ</name>
        <name evidence="2" type="ORF">LAX5112_04120</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Specifically methylates the adenine in position 2030 of 23S rRNA.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>adenosine(2030) in 23S rRNA + S-adenosyl-L-methionine = H(+) + N(6)-methyladenosine(2030) in 23S rRNA + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:43736"/>
            <dbReference type="Rhea" id="RHEA-COMP:10668"/>
            <dbReference type="Rhea" id="RHEA-COMP:10669"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:74411"/>
            <dbReference type="ChEBI" id="CHEBI:74449"/>
            <dbReference type="EC" id="2.1.1.266"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="1">Monomer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the RlmJ family.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.266" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75128.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673385.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04120"/>
    <dbReference type="EnsemblBacteria" id="CTQ75128">
        <property type="protein sequence ID" value="CTQ75128"/>
        <property type="gene ID" value="LAX5112_04120"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0036307">
        <property type="term" value="F:23S rRNA (adenine(2030)-N(6))-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070475">
        <property type="term" value="P:rRNA base methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00934">
        <property type="entry name" value="23SrRNA_methyltr_J"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007473">
        <property type="entry name" value="RlmJ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37426">
        <property type="entry name" value="PTHR37426"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04378">
        <property type="entry name" value="RsmJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="1" id="KW-0698">rRNA processing</keyword>
    <keyword evidence="1" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="1 2" id="KW-0808">Transferase</keyword>
    <feature type="region of interest" description="S-adenosyl-L-methionine binding" evidence="1">
        <location>
            <begin position="145"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="1">
        <location>
            <position position="166"/>
        </location>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="18"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="41"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="102"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="120"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="166"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="site" description="Interaction with substrate rRNA" evidence="1">
        <location>
            <position position="3"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00934"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75128.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="282" mass="31688" checksum="DB2E4C022B3A3CA5" modified="2015-12-09" version="1">MNYRHAYHAGNIGDVLKHAVLARLITYFQRKEKGFRIIDTHAGIGRYDLMSEETQKTGEWQQGIGKVLASDIPESVSELLAPWLDVVRGENGDSTLKTYPGSPLLARRMLRKQDRLTLTELHPADFETLSNLFAGDHQVKTIHLDGWLALGSFLPPKEKRGLVLIDPAFEKTSEFGDMTTAVVKSWRKWQTGTFALWYPMKDARAISRMHRDFEEAGLRDILALELNAGKSGPDTRMLGSGMTMVNPPFTLSSEMNVVLPWLCETVRQGPGADWNVHQIVGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJJ1</accession>
    <name>A0A0M7AJJ1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Cyclic di-GMP phosphodiesterase YahA</fullName>
            <ecNumber evidence="4">3.1.4.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">yahA</name>
        <name evidence="4" type="ORF">LAX5112_03921</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.4.-" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74612.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673223.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03921"/>
    <dbReference type="EnsemblBacteria" id="CTQ74612">
        <property type="protein sequence ID" value="CTQ74612"/>
        <property type="gene ID" value="LAX5112_03921"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01948">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.450">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001633">
        <property type="entry name" value="EAL_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035919">
        <property type="entry name" value="EAL_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00563">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00052">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141868">
        <property type="entry name" value="SSF141868"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50883">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="241"/>
            <end position="261"/>
        </location>
    </feature>
    <feature type="domain" description="EAL" evidence="3">
        <location>
            <begin position="264"/>
            <end position="517"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="516"/>
            <end position="543"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ74612.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="547" mass="60611" checksum="847733E25FE33466" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AK71</accession>
    <name>A0A0M7AK71_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Diguanylate cyclase YdeH</fullName>
            <ecNumber evidence="3">2.7.7.65</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ydeH</name>
        <name evidence="3" type="ORF">LAX5112_04053</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.7.7.65" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ74951.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673340.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04053"/>
    <dbReference type="EnsemblBacteria" id="CTQ74951">
        <property type="protein sequence ID" value="CTQ74951"/>
        <property type="gene ID" value="LAX5112_04053"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052621">
        <property type="term" value="F:diguanylate cyclase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd01949">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000160">
        <property type="entry name" value="GGDEF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00990">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00267">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00254">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50887">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="GGDEF" evidence="2">
        <location>
            <begin position="167"/>
            <end position="301"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="112"/>
            <end position="139"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ74951.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="301" mass="33919" checksum="04356E9591C53687" modified="2015-12-09" version="1">MTFLCEQVVSEIDRHDLNCDPRIFHVLHLFLTEPDSTVAREVQRLIASEEGLTAKALLFVYENFVQPNVSSEKQFESMKRSHGHLDAIRSSAENSAELCKDAKRKSTKDDVIKALSDNMAEILSRTDKLEQELAASQSEIFTDSLTGIYNRRYLEAEFAARHSRPSPKYFLALLDIDHFKNVNDTYGHIIGDQVLKLVATAIKSLIRSQDVLCRYGGEEFAILFDSADETECADVVERVRLGVTKHKLVNRKQGQTIGSVTLSAGLALVEPDDDFDTALERVDRLLYKAKQAGRDRLVIQT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKH7</accession>
    <name>A0A0M7AKH7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Protease production enhancer protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">degU_2</name>
        <name evidence="5" type="ORF">LAX5112_04317</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000022">
        <property type="protein sequence ID" value="CTQ75655.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04317"/>
    <dbReference type="EnsemblBacteria" id="CTQ75655">
        <property type="protein sequence ID" value="CTQ75655"/>
        <property type="gene ID" value="LAX5112_04317"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008233">
        <property type="term" value="F:peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06170">
        <property type="entry name" value="LuxR_C_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016032">
        <property type="entry name" value="Sig_transdc_resp-reg_C-effctor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000792">
        <property type="entry name" value="Tscrpt_reg_LuxR_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00196">
        <property type="entry name" value="GerE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00038">
        <property type="entry name" value="HTHLUXR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00421">
        <property type="entry name" value="HTH_LUXR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46894">
        <property type="entry name" value="SSF46894"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50043">
        <property type="entry name" value="HTH_LUXR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="5" id="KW-0645">Protease</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="4">
        <location>
            <begin position="10"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="domain" description="HTH luxR-type" evidence="3">
        <location>
            <begin position="152"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="2">
        <location>
            <position position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ75655.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="237" mass="25513" checksum="6FED702DBE9CD801" modified="2015-12-09" version="1">MSMETGSASKFLIIDDHPLFREALHSAVELAYPNSDTLDAASLDEANQILQDDAGFDLALLDLSMPGVKGMDGLLHLRTHYPRLPVVVVSGAEDPPIIAQVLAYGAAGFIPKSSKKTTLADAIQQVMNGAVYVPETYADGAEDPLDDDTRKMIERLSSLTPQQIRVLQMICNGLLNKQIAYELSVGETTVKAHVSEILRKLSVSSRTQAVIEVNRLEALGTASPFELSTAAPAEPVQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKZ5</accession>
    <name>A0A0M7AKZ5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">HTH-type transcriptional regulatory protein GabR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">gabR_3</name>
        <name evidence="3" type="ORF">LAX5112_04109</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">In the C-terminal section; belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ75076.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673368.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04109"/>
    <dbReference type="EnsemblBacteria" id="CTQ75076">
        <property type="protein sequence ID" value="CTQ75076"/>
        <property type="gene ID" value="LAX5112_04109"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009058">
        <property type="term" value="P:biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07377">
        <property type="entry name" value="WHTH_GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004839">
        <property type="entry name" value="Aminotransferase_I/II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000524">
        <property type="entry name" value="Tscrpt_reg_HTH_GntR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00155">
        <property type="entry name" value="Aminotran_1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00392">
        <property type="entry name" value="GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00035">
        <property type="entry name" value="HTHGNTR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00345">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50949">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH gntR-type" evidence="2">
        <location>
            <begin position="20"/>
            <end position="88"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005384"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ75076.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="495" mass="53987" checksum="73EE07E167AA7B03" modified="2015-12-09" version="1">MKRHAGAVLSSIKIDKHADKKISIQLYMALRDLLLTGALTPGDRLPATRTLAQEIGVSRTTVIDAIDRLISEGLLEARVGAGTFVSDALHARLEPRPKPSSNDNIKAIPRLSHASKHAIPDFKVRTRLPHKSQAFVTALPALDAFPMAQWAKLSARHWRKDRDDIAGYGEPFGFTPLREAIARQLNASRGIKCAPEQIFITNGAQRAFSLIGGMLVNPGEPIWFENPGAIGARNAFVAIGAQPIPVDVDTEGLCVEDGLKKAPHFRLAFVTPSHQQPLGNVMSLSRRLALMKAASEADAMIVEDDYDGEFYYGDQPPPTLKSIDTHDRVIYVGTFSKSLFPALRLGFLLAPEGLVESFERIFLTWLSGVPTVTQAMVAEFMDEGMFATHIRTMRQVYKERHDTLMGAASSLAGDIDLQPTSSGFHAVGLTNANLDEQRIVSETAARGITTAPLSRYSLADIQQRGLVLGFGSANPDDIRKGIQALKDVLPKCRLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALC6</accession>
    <name>A0A0M7ALC6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Calcineurin-like phosphoesterase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_04192</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75341.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673432.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04192"/>
    <dbReference type="EnsemblBacteria" id="CTQ75341">
        <property type="protein sequence ID" value="CTQ75341"/>
        <property type="gene ID" value="LAX5112_04192"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.21.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004843">
        <property type="entry name" value="Calcineurin-like_PHP_ApaH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029052">
        <property type="entry name" value="Metallo-depent_PP-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00149">
        <property type="entry name" value="Metallophos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56300">
        <property type="entry name" value="SSF56300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Metallophos" evidence="2">
        <location>
            <begin position="2"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="286"/>
            <end position="308"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00149"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ75341.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="308" mass="33911" checksum="12BC9B97CC41FEAF" modified="2015-12-09" version="1">MFRLAHLSDPHLGPLPDPKLLQLFSKRLLGYLNWQRNRSKIMGGNHLEQLVEDMKAQAPDHIAVTGDLVNIALPLEISGARAWLDELGAPDQVSVVPGNHDAYVRGAVKKARSAWWPFMRGDGDDDVPAEKVGSEATFPYVRKRGDVAIIGVTTGRATAPWFASGRVGTKQSRRLRAILEELAEEKLFRVVLIHHPPFKNATKWHKRLSDASRLRAVVKRAGAELILHGHTHIDSFESIEGPDGPVPVIGVPSATSAPGGHKPAARYNLFSIARQNDRWTCQMEEHGFEESGGPVKPLSRRDVAVPST</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALH8</accession>
    <name>A0A0M7ALH8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Prolyl-tRNA synthetase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04341</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75739.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673566.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000023.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04341"/>
    <dbReference type="EnsemblBacteria" id="CTQ75739">
        <property type="protein sequence ID" value="CTQ75739"/>
        <property type="gene ID" value="LAX5112_04341"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0002161">
        <property type="term" value="F:aminoacyl-tRNA editing activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004812">
        <property type="term" value="F:aminoacyl-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.960.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036754">
        <property type="entry name" value="YbaK/aa-tRNA-synt-asso_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007214">
        <property type="entry name" value="YbaK/aa-tRNA-synth-assoc-dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04073">
        <property type="entry name" value="tRNA_edit"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55826">
        <property type="entry name" value="SSF55826"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="2" id="KW-0436">Ligase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="tRNA_edit" evidence="1">
        <location>
            <begin position="26"/>
            <end position="138"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75739.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="158" mass="16497" checksum="0ADEFEF980940F60" modified="2015-12-09" version="1">MSLESVRAHLAKAAPDLEVLVTEDSSATVDLAAAAHGVEPGQIAKTLSFRVKDDVFLLVARGDARLDNKKAKAAFGGKAKMLNAEEVVEITSHPIGGVCPFGLPSPFKVYCDISLKAYDVVIPAAGATNAAVRIAPDRMAEITSAEWVDVCQPPLAAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALS4</accession>
    <name>A0A0M7ALS4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcriptional regulator, y4mF family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04210</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75392.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673451.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000021.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75392">
        <property type="protein sequence ID" value="CTQ75392"/>
        <property type="gene ID" value="LAX5112_04210"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01381">
        <property type="entry name" value="HTH_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00530">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="1">
        <location>
            <begin position="25"/>
            <end position="80"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75392.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="103" mass="11721" checksum="5645B258B0A050D3" modified="2015-12-09" version="1">MQFQTNAKTTDDKRQELRLQAGAWLKAAREEAGLSQRELAGKMGALYYTFISQIESGKGRLPADRYSVYAEALGVDSREFAIKMLEFYEPTTYQLIFNQKSAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AM90</accession>
    <name>A0A0M7AM90_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Putative MFS-type transporter YhjX</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">yhjX_3</name>
        <name evidence="7" type="ORF">LAX5112_04434</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ76009.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673645.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000024.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04434"/>
    <dbReference type="EnsemblBacteria" id="CTQ76009">
        <property type="protein sequence ID" value="CTQ76009"/>
        <property type="gene ID" value="LAX5112_04434"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="58"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="84"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="109"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="146"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="173"/>
            <end position="193"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="225"/>
            <end position="252"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="258"/>
            <end position="279"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="291"/>
            <end position="309"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="315"/>
            <end position="341"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="348"/>
            <end position="369"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="381"/>
            <end position="401"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="6">
        <location>
            <begin position="16"/>
            <end position="406"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ76009.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="419" mass="44568" checksum="F1C61892D1546384" modified="2015-12-09" version="1">MLKRPEPPTSEMTRSAIAVLVFCAAMNFFSRGVSETFAVFLLPVTKDLGWSRSTFGTIYFAYMATIGFSAPLIGMLFDRFGPRPVYTIGVFLFGSGFLLASIMEYLWQAILGLGIMTGIGISATGMTVASGLVSRWFAHRITLANALAYTGIPLGMVVIIPLTQVLIEATDWRTAYGVLGWVSLAMVAVIWFLPWQTMSDGADHIPPRQANRSFSLGAGVLRHPAFWGLFATLFLASVTVWSVMLQAVAFLISAGFTPVVAAFGYGAVGAMSVVGLVCFGWASDRFGQRNSVTVGYILSAVGVALLWQLQETPNLLLLMGFVVVFGAAMGSRGPAVSALVARLYPNNVAAIYGATTIGLGLGGAVGGWLSSAFFDWTGDYGAGFALSIATSLVGITLFWVIKPLSAGRWPDPNPVSDTP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMJ5</accession>
    <name>A0A0M7AMJ5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Inositol 2-dehydrogenase</fullName>
            <ecNumber evidence="3">1.1.1.18</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">idhA</name>
        <name evidence="3" type="ORF">LAX5112_04567</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.1.1.18" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000026">
        <property type="protein sequence ID" value="CTQ76355.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673761.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000026.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04567"/>
    <dbReference type="EnsemblBacteria" id="CTQ76355">
        <property type="protein sequence ID" value="CTQ76355"/>
        <property type="gene ID" value="LAX5112_04567"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050112">
        <property type="term" value="F:inositol 2-dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004104">
        <property type="entry name" value="Gfo/Idh/MocA-like_OxRdtase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000683">
        <property type="entry name" value="Gfo/Idh/MocA-like_OxRdtase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030827">
        <property type="entry name" value="Myo_inos_IolG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01408">
        <property type="entry name" value="GFO_IDH_MocA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02894">
        <property type="entry name" value="GFO_IDH_MocA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR04380">
        <property type="entry name" value="myo_inos_iolG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GFO_IDH_MocA" evidence="1">
        <location>
            <begin position="2"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="domain" description="GFO_IDH_MocA_C" evidence="2">
        <location>
            <begin position="133"/>
            <end position="327"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01408"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02894"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ76355.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="328" mass="35173" checksum="355699181B1D113F" modified="2015-12-09" version="1">MVRFGLLGCGRIGQVHARAIQASPDAKLVAVADAYDAPAQALAAGTDAEVREAAAIIEGDDIDAVIIGTPTTTHYDLIHQAARAKKAIFCEKPVDLSSERVRDCVEVVNQNGVMFLTAFNRRFDPNFANLQNRIAGGDIGDVELVTILSRDPSPPPINYIKTSGGLFRDMMIHDLDMARFILGEEPVTVFAVGSSLVDPEIGKAGDVDTAAVTLTTGSGKICQISNSRRAAYGYDQRLEVHGSKGMLRAENILENTVEMATQTGFARAPAQHFFLERYEAAYLAEITHFIDCLKNGTNPSPNIVDGLRAQILADAAAKSQETGVPVST</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="31" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AN45</accession>
    <name>A0A0M7AN45_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Ribose-phosphate pyrophosphokinase</fullName>
            <shortName evidence="6">RPPK</shortName>
            <ecNumber evidence="6">2.7.6.1</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">5-phospho-D-ribosyl alpha-1-diphosphate</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">Phosphoribosyl diphosphate synthase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">Phosphoribosyl pyrophosphate synthase</fullName>
            <shortName evidence="6">P-Rib-PP synthase</shortName>
            <shortName evidence="6">PRPP synthase</shortName>
            <shortName evidence="6">PRPPase</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6 8" type="primary">prs</name>
        <name evidence="8" type="ORF">LAX5112_04148</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>ATP + D-ribose 5-phosphate = 5-phospho-alpha-D-ribose 1-diphosphate + AMP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:15609"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:58017"/>
            <dbReference type="ChEBI" id="CHEBI:78346"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="2.7.6.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="6">Binds 2 Mg(2+) ions per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="6">Metabolic intermediate biosynthesis; 5-phospho-alpha-D-ribose 1-diphosphate biosynthesis; 5-phospho-alpha-D-ribose 1-diphosphate from D-ribose 5-phosphate (route I): step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Homohexamer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.7.6.1" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75213.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040450899.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04148"/>
    <dbReference type="EnsemblBacteria" id="CTQ75213">
        <property type="protein sequence ID" value="CTQ75213"/>
        <property type="gene ID" value="LAX5112_04148"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00087">
        <property type="reaction ID" value="UER00172"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004749">
        <property type="term" value="F:ribose phosphate diphosphokinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006015">
        <property type="term" value="P:5-phosphoribose 1-diphosphate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009165">
        <property type="term" value="P:nucleotide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009156">
        <property type="term" value="P:ribonucleoside monophosphate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd06223">
        <property type="entry name" value="PRTases_typeI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2020">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00583_B">
        <property type="entry name" value="RibP_PPkinase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000842">
        <property type="entry name" value="PRib_PP_synth_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029099">
        <property type="entry name" value="Pribosyltran_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000836">
        <property type="entry name" value="PRibTrfase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029057">
        <property type="entry name" value="PRTase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005946">
        <property type="entry name" value="Rib-P_diPkinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037515">
        <property type="entry name" value="Rib-P_diPkinase_bac"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10210">
        <property type="entry name" value="PTHR10210"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14572">
        <property type="entry name" value="Pribosyl_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13793">
        <property type="entry name" value="Pribosyltran_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53271">
        <property type="entry name" value="SSF53271"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01251">
        <property type="entry name" value="ribP_PPkin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00114">
        <property type="entry name" value="PRPP_SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 6 8" id="KW-0418">Kinase</keyword>
    <keyword evidence="6" id="KW-0460">Magnesium</keyword>
    <keyword evidence="2 6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3 6" id="KW-0545">Nucleotide biosynthesis</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 6 8" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Pribosyltran_N" evidence="7">
        <location>
            <begin position="1"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="region of interest" description="Ribose-5-phosphate binding" evidence="6">
        <location>
            <begin position="220"/>
            <end position="224"/>
        </location>
    </feature>
    <feature type="active site" evidence="6">
        <location>
            <position position="190"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="34"/>
            <end position="36"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="93"/>
            <end position="94"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="127"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="167"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="192"/>
        </location>
        <ligand>
            <name>D-ribose 5-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:78346"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="216"/>
        </location>
        <ligand>
            <name>D-ribose 5-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:78346"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022727"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00583"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF13793"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ75213.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="310" mass="33357" checksum="B9AC94CA18356261" modified="2015-12-09" version="1">MKIVAGNSNRALAEEISQYLDVPLAKCQVRRFADQEIFVEIQENVRGEDVFVVQPTSYPANDHLMELLIIIDALRRSSARRITAVIPYFGYARQDRRASGRTPVSAKLVANLITEAGADRVLTLDLHAGQIQGFFDIPTDNLFAAPVMTRDIKERYATDNVMVVSPDVGGVVRARALAKRIEAPLSIVDKRRDKPGESEVMNIIGDVNGCDCILVDDIVDSGGTLCNAADALLAKGAKSVTAYITHGVLSGGAVARVTSSKLKELVITNSIEPTAAITAAPNIRAISIAPLMGEAINRTALEKSVSSLFN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANG6</accession>
    <name>A0A0M7ANG6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04423</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75956.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75956">
        <property type="protein sequence ID" value="CTQ75956"/>
        <property type="gene ID" value="LAX5112_04423"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809482" evidence="1">
        <location>
            <begin position="27"/>
            <end position="221"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75956.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="221" mass="24556" checksum="33104E5B06487187" modified="2015-12-09" version="1">MRIKGMRTFGLVMRMALAGTVAIAGAAGAQTFDDFLAAEEQELASEQVRDEDLEEFEQVLNGTDTERSLRVMRFMLGSGSPRLVRRAMEFGLLSARPLLRQEALKAVFDAGGPFRIEIDLTRADEDRTRMRYYLNWLAGGYSADGKTGYYQFTTAPFDAKARCWKFLGGDNCALSLSNTSVSLRGWTYGAGNLDLNDDGILEGTLRYRDNVPVPARIVLVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APE9</accession>
    <name>A0A0M7APE9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04260</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75494.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673491.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000021.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75494">
        <property type="protein sequence ID" value="CTQ75494"/>
        <property type="gene ID" value="LAX5112_04260"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ75494.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="294" mass="32502" checksum="DEB5405053315EDF" modified="2015-12-09" version="1">MPTSIEAAEQIAAISTPDKLLVRLSTVCKTLSANGGIDTSYNGAARNHWLAIHLALNLQFAHKAFGAVAPFARPKPVLDRKKVILGYRSDFLNDRQVIDLHFFHCMGHRMCDHQNGLAALQSDPFDLEEARKFARTGGNYKKQLNALKLNSLHYASLFAFGAAAILSEQNKKLRTGPLNQATAIESQIKAKPPSNNANPKTWAEIFVAADLLKQLDIKVTGSAINEMRAVLFGWSKACQTRPDETLRTCRSVHRHLTGIEYPKKKSRKAARNTAAKSAVEPQSVPAPIWYQGMF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APH0</accession>
    <name>A0A0M7APH0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Exosortase A system-associated hydrolase 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04270</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75514.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673512.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000021.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04270"/>
    <dbReference type="EnsemblBacteria" id="CTQ75514">
        <property type="protein sequence ID" value="CTQ75514"/>
        <property type="gene ID" value="LAX5112_04270"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809502" evidence="1">
        <location>
            <begin position="21"/>
            <end position="313"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75514.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="313" mass="33335" checksum="5E311B04454E3CDE" modified="2015-12-09" version="1">MTIRSVTTAALLMASTSAIAQVETRTITFENEGAILSGTLYLPEEHDGTALPAVVVTGAWTSVEEQMPSVYAHQMVARGFAAFTFDFRGWGKSGDLPENVRFVESPEAKTSDIRAAFDVVATLPEVDATQIHGLGICASAGYMVDAVSGNDAVKSIGLVAPWLQNADLVEAVYGGADGVSALIEVSRKAEADGGKIIPAAGPEGAEGVLMPIGGYYYEQDRGAIPAYDNKWNQAGWEGWLTYYPADHADRLTHPLAIVHSEAAAIPQGVKAFLSGFAGDATLQILEDVTQFDFYDNPEDVTRAADAMAEHFRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APJ7</accession>
    <name>A0A0M7APJ7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">5-dehydro-2-deoxygluconokinase</fullName>
            <ecNumber evidence="4">2.7.1.92</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">iolC</name>
        <name evidence="4" type="ORF">LAX5112_04564</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.7.1.92" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000026">
        <property type="protein sequence ID" value="CTQ76346.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673758.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000026.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04564"/>
    <dbReference type="EnsemblBacteria" id="CTQ76346">
        <property type="protein sequence ID" value="CTQ76346"/>
        <property type="gene ID" value="LAX5112_04564"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047590">
        <property type="term" value="F:5-dehydro-2-deoxygluconokinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1190.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002173">
        <property type="entry name" value="Carboh/pur_kinase_PfkB_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030830">
        <property type="entry name" value="Myo_inos_IolC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011611">
        <property type="entry name" value="PfkB_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029056">
        <property type="entry name" value="Ribokinase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00294">
        <property type="entry name" value="PfkB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53613">
        <property type="entry name" value="SSF53613"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR04382">
        <property type="entry name" value="myo_inos_iolC_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00584">
        <property type="entry name" value="PFKB_KINASES_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 4" id="KW-0418">Kinase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PfkB" evidence="3">
        <location>
            <begin position="10"/>
            <end position="307"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ76346.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="328" mass="34818" checksum="2DFFB8B803714307" modified="2015-12-09" version="1">MLLEAIARNNFVVVGRAGIDFYTDAGVRAEDAERLGVGLGGSAANIGAGICKLGGKAALVTRVSDDSVGSYCIGQLKHYGVDTKHVTPVGGEYRNSLAFYESVVEGHRNVIYRNGAADFQMDEHDVARVDYGKYGALITAGTVFAAEPSRSATFKAFDLAKAVNLPLIFDVDYRPYSWPSADVAADVLSRAAAKCDMIVGNDEEFGFMAGDYDKGLEKARELVSTTAELVIYKMGEAGAITITRDGEFRTGIYPVEALKPNGAGDSFMSGLMTSIADGFVLKEAILRGSACASIVVAKPGCAPAMPDKTELEAFLASHPGPTQEHRTF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQ47</accession>
    <name>A0A0M7AQ47_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative N-acetylmannosaminyltransferase</fullName>
            <ecNumber evidence="2">2.4.1.187</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">tagA_2</name>
        <name evidence="2" type="ORF">LAX5112_04703</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.4.1.187" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000028">
        <property type="protein sequence ID" value="CTQ76767.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04703"/>
    <dbReference type="EnsemblBacteria" id="CTQ76767">
        <property type="protein sequence ID" value="CTQ76767"/>
        <property type="gene ID" value="LAX5112_04703"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047244">
        <property type="term" value="F:N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009058">
        <property type="term" value="P:biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06533">
        <property type="entry name" value="Glyco_transf_WecG_TagA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004629">
        <property type="entry name" value="WecG_TagA_CpsF"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34136">
        <property type="entry name" value="PTHR34136"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03808">
        <property type="entry name" value="Glyco_tran_WecG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00696">
        <property type="entry name" value="wecG_tagA_cpsF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76767.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="278" mass="31869" checksum="DC41285C5D2B7452" modified="2015-12-09" version="1">MIAGFNRHPTSHMPNRSEQKPEDSLTAASASPFSKLQFIGLDFDIGNQADWLSLILNSKPQTFEYFVTPNVYHVILLERDDEVASAYEDAFWKVCDSKILSRLANSQKMNLRVYPGADIVQDLLADPKAQKLRFAVIGPDLSQIEMLRNRYPGVDLQYIPSGFMDRGAQDWEKALTATEASDADIFLICLSFPKQEFFAQDLKRRGSTAGIGLCVGASIDFLTDRQKRAPEWVRACGMEWAFRLLANPKRMWRRYLWDGPKIIWMFLKWRRKSASTMK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQ50</accession>
    <name>A0A0M7AQ50_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Glutathione S-transferase GstB</fullName>
            <ecNumber evidence="3">2.5.1.18</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">gstB_5</name>
        <name evidence="3" type="ORF">LAX5112_04782</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.5.1.18" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000030">
        <property type="protein sequence ID" value="CTQ77029.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04782"/>
    <dbReference type="EnsemblBacteria" id="CTQ77029">
        <property type="protein sequence ID" value="CTQ77029"/>
        <property type="gene ID" value="LAX5112_04782"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004364">
        <property type="term" value="F:glutathione transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006749">
        <property type="term" value="P:glutathione metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010987">
        <property type="entry name" value="Glutathione-S-Trfase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036282">
        <property type="entry name" value="Glutathione-S-Trfase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004045">
        <property type="entry name" value="Glutathione_S-Trfase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004046">
        <property type="entry name" value="GST_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00043">
        <property type="entry name" value="GST_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13417">
        <property type="entry name" value="GST_N_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47616">
        <property type="entry name" value="SSF47616"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50405">
        <property type="entry name" value="GST_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50404">
        <property type="entry name" value="GST_NTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="GST N-terminal" evidence="1">
        <location>
            <begin position="1"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="domain" description="GST C-terminal" evidence="2">
        <location>
            <begin position="83"/>
            <end position="209"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50404"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50405"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ77029.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="210" mass="23534" checksum="6D2C95E451D12F5A" modified="2015-12-09" version="1">MIKIHGRKTSANVQPVIWCLDELGVDYERLDVGGPFGGTDTPEFLGMNPLGLVPVLEEGGQAISEAVTILRYLMRRFGGHPSDPMAAAQIEKWADMSRQHIYVPLIPTIFIQKVRVTAEDRNEVAVAQAEAALKQSMAIFEANIKGPFFGGEELNLVDYQVGGLLYRYYELDFDRADLPQLKAYYDRLCERKAYQENIMIDFSAMKVPGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AR85</accession>
    <name>A0A0M7AR85_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative transporter component</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04755</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000030">
        <property type="protein sequence ID" value="CTQ76952.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04755"/>
    <dbReference type="EnsemblBacteria" id="CTQ76952">
        <property type="protein sequence ID" value="CTQ76952"/>
        <property type="gene ID" value="LAX5112_04755"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="42"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="83"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="107"/>
            <end position="131"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76952.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="146" mass="14857" checksum="610DC19EC9287B41" modified="2015-12-09" version="1">MIRLLSAFAIGLVFGTGILISGMGNPAKVLNFFDVAGTWDPSLAFVMGGALTVAAIGYRLAFRMKSPVLAAEFSMPTKTDLDMKLIGGSAIFGIGWGMSGFCPGGLVPVLGLGLSGPLLTGAAIVAGILVARWITTLGSRPSPAQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ART9</accession>
    <name>A0A0M7ART9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_04815</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000031">
        <property type="protein sequence ID" value="CTQ77136.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04815"/>
    <dbReference type="EnsemblBacteria" id="CTQ77136">
        <property type="protein sequence ID" value="CTQ77136"/>
        <property type="gene ID" value="LAX5112_04815"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021273">
        <property type="entry name" value="DUF2852"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11014">
        <property type="entry name" value="DUF2852"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="18"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="85"/>
            <end position="119"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ77136.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="141" mass="16435" checksum="ED90B892DABD7320" modified="2015-12-09" version="1">MTTTKSCMIKPAWTPMTIGLMVLGFVVFWPLGLAMLAYILWGDRFEGMARDARDQWRGSPLKGAFENMNKPSYSRTGNVAFDEYRERELKRLEEERAKIDAMRNEFDEFLTELRRARDQEEFDRFMANRGRPNTGPEANPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASI4</accession>
    <name>A0A0M7ASI4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Glyco_trans_2-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yfdH</name>
        <name evidence="3" type="ORF">LAX5112_04841</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000032">
        <property type="protein sequence ID" value="CTQ77220.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04841"/>
    <dbReference type="EnsemblBacteria" id="CTQ77220">
        <property type="protein sequence ID" value="CTQ77220"/>
        <property type="gene ID" value="LAX5112_04841"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001173">
        <property type="entry name" value="Glyco_trans_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00535">
        <property type="entry name" value="Glycos_transf_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="227"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="260"/>
            <end position="285"/>
        </location>
    </feature>
    <feature type="domain" description="Glyco_trans_2-like" evidence="2">
        <location>
            <begin position="3"/>
            <end position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00535"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ77220.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="319" mass="35790" checksum="E4F1DDC91E312BAD" modified="2015-12-09" version="1">MVSVIVPVYNEEDVIGHFLEETGRVLEETGLQYEYVFIDDGSRDTTADILTDRLANGLPGRLLGLSRNFGKEAALSAGLEAAKGDIGVIIDADLQDPPELIHQMIDGWRAGYDVVYGLRVDRTSDTLMKRSTAGMFYKVFNKLSNVDMPPNAGDFRLIDRAVIDALLRLPERNRFMKGLFAWVGFPSMAVPYERPPRKAGDGKFNYWKLWNFALDGITGFTTMPLRMWFYGGALVSILAFAYAIYLTIRGIIFGIDVPGYTSIMVAVLLFSGIQLLSIGMIGEYVTRLFNESKQRPVYLLQDVIESTPLKTHQQDDHDH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AT25</accession>
    <name>A0A0M7AT25_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">tRNA-specific 2-thiouridylase MnmA</fullName>
            <ecNumber evidence="7">2.8.1.13</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7 8" type="primary">mnmA</name>
        <name evidence="8" type="ORF">LAX5112_04999</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>AH2 + ATP + S-sulfanyl-L-cysteinyl-[protein] + uridine(34) in tRNA = 2-thiouridine(34) in tRNA + A + AMP + diphosphate + H(+) + L-cysteinyl-[protein]</text>
            <dbReference type="Rhea" id="RHEA:47032"/>
            <dbReference type="Rhea" id="RHEA-COMP:10131"/>
            <dbReference type="Rhea" id="RHEA-COMP:11726"/>
            <dbReference type="Rhea" id="RHEA-COMP:11727"/>
            <dbReference type="Rhea" id="RHEA-COMP:11728"/>
            <dbReference type="ChEBI" id="CHEBI:13193"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17499"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:61963"/>
            <dbReference type="ChEBI" id="CHEBI:65315"/>
            <dbReference type="ChEBI" id="CHEBI:87170"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="2.8.1.13"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the MnmA/TRMU family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.8.1.13" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000039">
        <property type="protein sequence ID" value="CTQ77661.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04999"/>
    <dbReference type="EnsemblBacteria" id="CTQ77661">
        <property type="protein sequence ID" value="CTQ77661"/>
        <property type="gene ID" value="LAX5112_04999"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016783">
        <property type="term" value="F:sulfurtransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006400">
        <property type="term" value="P:tRNA modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01998">
        <property type="entry name" value="tRNA_Me_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.280">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00144">
        <property type="entry name" value="tRNA_thiouridyl_MnmA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023382">
        <property type="entry name" value="Adenine_a_hdrlase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004506">
        <property type="entry name" value="tRNA-specific_2-thiouridylase"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00420">
        <property type="entry name" value="trmU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 7" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="3 7 8" id="KW-0808">Transferase</keyword>
    <keyword evidence="4 7" id="KW-0819">tRNA processing</keyword>
    <keyword evidence="2 7" id="KW-0820">tRNA-binding</keyword>
    <feature type="region of interest" description="Interaction with tRNA" evidence="7">
        <location>
            <begin position="216"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="7">
        <location>
            <position position="170"/>
        </location>
    </feature>
    <feature type="active site" description="Cysteine persulfide intermediate" evidence="7">
        <location>
            <position position="266"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="76"/>
            <end position="83"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="102"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="194"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="site" description="Interaction with tRNA" evidence="7">
        <location>
            <position position="195"/>
        </location>
    </feature>
    <feature type="site" description="Interaction with tRNA" evidence="7">
        <location>
            <position position="406"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00144"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ77661.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="449" mass="49191" checksum="2674BA2B59E81AE4" modified="2015-12-09" version="1">MHAGCARLAIGKQRPYLYSAPQLEMTRGNKRFPADRTRRRLNACDRQGPNFLKVPLNMLNSLDLPGRPEDTRVVVAMSGGVDSSVVAAMMHAEGYDVIGVTLQLYDHGAAVAKAKSCCAGVDIHDARRAAEKIGIPHYVLDYESRFKEQVMDRFADSYIAGETPIPCVSCNQTVKFTDLLKTARDLGADALATGHYVRSATKGNKRALFRPADLDRDQSYFLFATTQEQLDFVRFPLGGMPKSRVRTLAEEFGLSVANKPDSQDICFVPNGDYAAVIRKLRPNAAEPGEIVHMDGRVLGEHNGIIHFTIGQRRGIGVATGEPLYVVRLDADERRVIVGPREALATRTILLREMNWIGDQPLDEGDEIEVFAKVRSTRPPAPATLRILNGKAFVDLANGETGVAPGQACVFFDSDDETARVLGGGWIHKTERTGTWAVDFPQAQTPVSAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZNB2</accession>
    <name>A0A0M6ZNB2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Agmatinase</fullName>
            <ecNumber evidence="5">3.5.3.11</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">speB</name>
        <name evidence="5" type="ORF">LAX5112_00040</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the arginase family. Agmatinase subfamily.</text>
    </comment>
    <dbReference type="EC" id="3.5.3.11" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63712.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670101.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00040"/>
    <dbReference type="EnsemblBacteria" id="CTQ63712">
        <property type="protein sequence ID" value="CTQ63712"/>
        <property type="gene ID" value="LAX5112_00040"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008783">
        <property type="term" value="F:agmatinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901564">
        <property type="term" value="P:organonitrogen compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005925">
        <property type="entry name" value="Agmatinase-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006035">
        <property type="entry name" value="Ureohydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023696">
        <property type="entry name" value="Ureohydrolase_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020855">
        <property type="entry name" value="Ureohydrolase_Mn_BS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11358">
        <property type="entry name" value="PTHR11358"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00491">
        <property type="entry name" value="Arginase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF036979">
        <property type="entry name" value="Arginase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52768">
        <property type="entry name" value="SSF52768"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01230">
        <property type="entry name" value="agmatinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01053">
        <property type="entry name" value="ARGINASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51409">
        <property type="entry name" value="ARGINASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009227"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003684"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ63712.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="323" mass="35203" checksum="0FB84103B3280A16" modified="2015-12-09" version="1">MAVDLPRQTDNAFLGDSLKGGSHEPTYGGVLSFMRRRYSRDLTEVDLAVWGIPFDASVSNRPGARFGPQGVRRASAIFDGDPQYPFEFDPFETLACVDYGDCVFDYGHNRDIPGHIEAQAREILQSGTHLFSIGGDHFVTYPLLKAHVEKHGPLALVQFDAHQDTWDDKGDRIDHGTFVGRAVREGLIDPEKSIQIGIRTHAPETCGLEILYGEEVELLGVNGVVELVKDRVGDAKAYMTFDIDCLDPAFAPGTGTPVAGGLTSREALMILRRLGDLNFVGGDVVEVAPAYDHADITSIAGASVALMYIGLLAEKQRQRTEGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZNN7</accession>
    <name>A0A0M6ZNN7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative deoxyribonuclease YcfH</fullName>
            <ecNumber evidence="2">3.1.21.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ycfH</name>
        <name evidence="2" type="ORF">LAX5112_00280</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the metallo-dependent hydrolases superfamily. TatD-type hydrolase family.</text>
    </comment>
    <dbReference type="EC" id="3.1.21.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64389.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670260.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00280"/>
    <dbReference type="EnsemblBacteria" id="CTQ64389">
        <property type="protein sequence ID" value="CTQ64389"/>
        <property type="gene ID" value="LAX5112_00280"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004536">
        <property type="term" value="F:deoxyribonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01310">
        <property type="entry name" value="TatD_DNAse"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018228">
        <property type="entry name" value="DNase_TatD-rel_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015991">
        <property type="entry name" value="Hydrolase_TatD-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032466">
        <property type="entry name" value="Metal_Hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001130">
        <property type="entry name" value="TatD-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01026">
        <property type="entry name" value="TatD_DNase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005902">
        <property type="entry name" value="DNase_TatD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51556">
        <property type="entry name" value="SSF51556"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00010">
        <property type="entry name" value="TIGR00010"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01137">
        <property type="entry name" value="TATD_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01090">
        <property type="entry name" value="TATD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009275"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64389.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="270" mass="29775" checksum="48AC37075F558C64" modified="2015-12-09" version="1">MIVDSHCHLDFPDFDGERDEVVARAKDAGVELMVTICTHIRKFDQVRAISEAYPEVYCSVGTHPHNAGTERGIPVDEIVKLAKHPKVVAIGEAGLDYFYDKAPRDAQAEGLRIHIEAARQTGLPLVIHSRDADDDMTSILREEMGKGTFPALLHCFSSGRDLALTGIELGLYVSFSGILTFKKSEELRDIARELPADRLLVETDAPYLAPQPRRGKRNEPAYTAMTAAVLAEVRGVSEEEIARQTTANFFRLFKKVQKPESVSNDVAGAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZNR9</accession>
    <name>A0A0M6ZNR9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">dctB_1</name>
        <name evidence="9" type="ORF">LAX5112_00288</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64415.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670266.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00288"/>
    <dbReference type="EnsemblBacteria" id="CTQ64415">
        <property type="protein sequence ID" value="CTQ64415"/>
        <property type="gene ID" value="LAX5112_00288"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029151">
        <property type="entry name" value="Sensor-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017055">
        <property type="entry name" value="Sig_transdc_His_kinase_DctB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF036431">
        <property type="entry name" value="STHK_DctB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103190">
        <property type="entry name" value="SSF103190"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0808">Transferase</keyword>
    <keyword evidence="5 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="300"/>
            <end position="322"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="8">
        <location>
            <begin position="396"/>
            <end position="609"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ64415.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="626" mass="69354" checksum="3AD6172BB027B8B8" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZNU1</accession>
    <name>A0A0M6ZNU1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_00063</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the UPF0382 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63780.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670118.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00063"/>
    <dbReference type="EnsemblBacteria" id="CTQ63780">
        <property type="protein sequence ID" value="CTQ63780"/>
        <property type="gene ID" value="LAX5112_00063"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006696">
        <property type="entry name" value="DUF423"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04241">
        <property type="entry name" value="DUF423"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="14"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="47"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="73"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="106"/>
            <end position="126"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ63780.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="135" mass="13886" checksum="41C52CE3136E353D" modified="2015-12-09" version="1">MQTAHTPQEPISKLLRLAIVLSGLSGAAGVGLLALSAHADTTGLMETAAHMLLFHAPVFLGMGIVAQVRSVPFLPVAFALMVVGIVLFSGDLIARATIGSRLFPMAAPTGGLLTITSWIALAFSAIRIKPRSAGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZP07</accession>
    <name>A0A0M6ZP07_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Putative 2-aminoethylphosphonate import ATP-binding protein PhnT</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">phnT</name>
        <name evidence="10" type="ORF">LAX5112_00173</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64087.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ64087">
        <property type="protein sequence ID" value="CTQ64087"/>
        <property type="gene ID" value="LAX5112_00173"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015408">
        <property type="term" value="F:ABC-type ferric iron transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd03259">
        <property type="entry name" value="ABC_Carb_Solutes_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015853">
        <property type="entry name" value="ABC_transpr_FbpC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008995">
        <property type="entry name" value="Mo/tungstate-bd_C_term_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50331">
        <property type="entry name" value="SSF50331"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 8 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7" id="KW-0472">Membrane</keyword>
    <keyword evidence="5 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ABC transporter" evidence="9">
        <location>
            <begin position="30"/>
            <end position="262"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="62"/>
            <end position="69"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ64087.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="371" mass="39859" checksum="3A510123CD9BDAAE" modified="2015-12-09" version="1">MFKSNESNWNGGPKTWGARGSASATIAAGLVFENISHDYEGVPSVRNLSLSIAPGEILCLLGHSGCGKTTLMRIAAGIERQSAGRVLINGKEISGPQTFVPPERRGIGLMFQDYALFPHMTILDNVVFGIKKLGKEAASAAALTALRRVGLADYADDYPHALSGGEQQRVALARALVPRPGILLMDEPFSGLDKRLRDSVRDETLAVIRETRATCIIVTHDPEEAMRMGDQIALMRRGELVQHGTAAELYNNPADLFAARFFSELNQIEGNVTSSGVETPLGIVASSGINQGSADVCIRPQGILLGRAGLCGVRGRIQSKRFVGEVDLLTIIVEGLDQPLQARVRAGCEWEQGMDVGVTTDPKDVLVFPRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQ78</accession>
    <name>A0A0M6ZQ78_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Omega-amino acid--pyruvate aminotransferase</fullName>
            <ecNumber evidence="3">2.6.1.18</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_00261</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.6.1.18" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64336.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670244.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00261"/>
    <dbReference type="EnsemblBacteria" id="CTQ64336">
        <property type="protein sequence ID" value="CTQ64336"/>
        <property type="gene ID" value="LAX5112_00261"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016223">
        <property type="term" value="F:beta-alanine-pyruvate transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00610">
        <property type="entry name" value="OAT_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005814">
        <property type="entry name" value="Aminotrans_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00202">
        <property type="entry name" value="Aminotran_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000521">
        <property type="entry name" value="Transaminase_4ab_Lys_Orn"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00600">
        <property type="entry name" value="AA_TRANSFER_CLASS_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="1 2" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="3" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU003560"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ64336.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="447" mass="48288" checksum="C9775C7797D61D95" modified="2015-12-09" version="1">MSSSASAASSQAATNNLEAFWMPYTANRQFKQNPRMFVGAKDMHYTTADGREVLDGTAGLWCCNAGHGRPKIVEAVQNQVAEMDYAPAFQMGHPKAFELAARLTAMMPSPLDHVFFTNSGSESVDTALKIALGYQRSIGQGTRTRFIGRERGYHGTGFGGISVGGIVANRKQFGNMLNGVDHLPHTHDLSRNAFSRGEPKNGAEYAEELIRLVQLHDASTIAAVIVEPVAGSTGVLIPPVGYLKRLREICDQNGILLIFDEVITGFGRLGTPFAVDYFDVIPDMVTTAKGITSGVIPMGAVFCAKKIYDAFMDGPDHLIELFHGYTYSGHPIACAAALATLDTYEEEGLLTRAASLAQYWEDGLHSLKDCPNVIDIRNLGLIGAIELTPIDGAPTKRAFSAFLKAYDDGILIRTTGDIIALSPPLIISEAQIDELFGKLRTVLDAID</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="33" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQN6</accession>
    <name>A0A0M6ZQN6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">C4-dicarboxylate transport transcriptional regulatory protein DctD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">dctD_2</name>
        <name evidence="9" type="ORF">LAX5112_00354</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64657.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670343.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00354"/>
    <dbReference type="EnsemblBacteria" id="CTQ64657">
        <property type="protein sequence ID" value="CTQ64657"/>
        <property type="gene ID" value="LAX5112_00354"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002197">
        <property type="entry name" value="HTH_Fis"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002078">
        <property type="entry name" value="Sigma_54_int"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025662">
        <property type="entry name" value="Sigma_54_int_dom_ATP-bd_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025944">
        <property type="entry name" value="Sigma_54_int_dom_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02954">
        <property type="entry name" value="HTH_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00158">
        <property type="entry name" value="Sigma54_activat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00675">
        <property type="entry name" value="SIGMA54_INTERACT_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00688">
        <property type="entry name" value="SIGMA54_INTERACT_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50045">
        <property type="entry name" value="SIGMA54_INTERACT_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0804">Transcription</keyword>
    <keyword evidence="4" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="3" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="domain" description="Response regulatory" evidence="8">
        <location>
            <begin position="15"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="domain" description="Sigma-54 factor interaction" evidence="7">
        <location>
            <begin position="155"/>
            <end position="384"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="6">
        <location>
            <position position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50045"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ64657.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="471" mass="51638" checksum="1BFFE99C0E042773" modified="2015-12-09" version="1">MTTLNSKTSQSVNTPVLIVDDDPSMRAALRQWIRLAEFETIEVATADQAMAVLSSDFSGCIVTDVMLDGDDGMTLLRRVGELDGDLPVILITGHGDVPMAVDAMRSGAYDFVEKPFDPDLIAEVVRRACNRRALVLENRALKTQIADSSSLESRLIGNSPAMQALRRQILHFAQTDAAVLITGETGTGKEVIAQALHEFSARKDAPFMAINAAALPETMVEAELFGHEAGAFTGADRQRIGRIEAANAGVLFLDEIVSMPMPLQAKLLRVLQERKVDRIGGHRPVDVDIRLVSAANVDPREAVASGRLREDLLFRLNAIELEIPPLRERGRDSILLFDTFLNRFAVQYGMEAPTPSALDEAFLQTYAWPGNVRELRNAAERFVLNAQVNPQPLETLVTGRRDDVPLMGAGGLKDLMDAYERSLIEGALRRHGGKVADVMRELNVPRRTLNEKMARLGLSRDQASDPEPGTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQY8</accession>
    <name>A0A0M6ZQY8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">tRNA pseudouridine synthase A</fullName>
            <ecNumber evidence="4">5.4.99.12</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">tRNA pseudouridine(38-40) synthase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="4">tRNA pseudouridylate synthase I</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="4">tRNA-uridine isomerase I</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="4 9" type="primary">truA</name>
        <name evidence="9" type="ORF">LAX5112_00527</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4 7">
            <text>uridine(38/39/40) in tRNA = pseudouridine(38/39/40) in tRNA</text>
            <dbReference type="Rhea" id="RHEA:22376"/>
            <dbReference type="Rhea" id="RHEA-COMP:10085"/>
            <dbReference type="Rhea" id="RHEA-COMP:10087"/>
            <dbReference type="ChEBI" id="CHEBI:65314"/>
            <dbReference type="ChEBI" id="CHEBI:65315"/>
            <dbReference type="EC" id="5.4.99.12"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="4">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 4 7">Belongs to the tRNA pseudouridine synthase TruA family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="5.4.99.12" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65148.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670471.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00527"/>
    <dbReference type="EnsemblBacteria" id="CTQ65148">
        <property type="protein sequence ID" value="CTQ65148"/>
        <property type="gene ID" value="LAX5112_00527"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0106029">
        <property type="term" value="F:tRNA pseudouridine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031119">
        <property type="term" value="P:tRNA pseudouridine synthesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd02570">
        <property type="entry name" value="PseudoU_synth_EcTruA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.580">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.660">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00171">
        <property type="entry name" value="TruA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020103">
        <property type="entry name" value="PsdUridine_synth_cat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001406">
        <property type="entry name" value="PsdUridine_synth_TruA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020097">
        <property type="entry name" value="PsdUridine_synth_TruA_a/b_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020095">
        <property type="entry name" value="PsdUridine_synth_TruA_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020094">
        <property type="entry name" value="TruA/RsuA/RluB/E/F_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11142">
        <property type="entry name" value="PTHR11142"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01416">
        <property type="entry name" value="PseudoU_synth_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001430">
        <property type="entry name" value="tRNA_psdUrid_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55120">
        <property type="entry name" value="SSF55120"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00071">
        <property type="entry name" value="hisT_truA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 7" id="KW-0413">Isomerase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4 7" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="PseudoU_synth_1" evidence="8">
        <location>
            <begin position="8"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="domain" description="PseudoU_synth_1" evidence="8">
        <location>
            <begin position="144"/>
            <end position="245"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="4 5">
        <location>
            <position position="52"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4 6">
        <location>
            <position position="111"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009375"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR001430-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR001430-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003792"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF01416"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ65148.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="272" mass="30553" checksum="F035B55CD2B1E107" modified="2015-12-09" version="1">MPRYKLTVEYDGRPFSGWQRQANAPSVQAVIERAIKAFSGEEVTIGGAGRTDTGVHATGQVCHADLSKKWPTKTVMGALNFHCQPDPVVVLNCEEMHEGFDARFSAIRRAYRYRIHNRLQPLTHQLGLAWHVKHELDADAMHQAAQEFVGHHDFTTFRHSRCQAKSPEKTLEHFSVYRDGEFVIAECSSRSFLHNQVRSMVGTLRLVGEGRWGPGDITKALKARDRKACGPVAPADGLYLMRVDYRPAQVDIDSLAEWQARKAEMAAVETEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRM6</accession>
    <name>A0A0M6ZRM6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Xaa-Pro dipeptidase</fullName>
            <ecNumber evidence="3">3.4.13.9</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">pepQ_1</name>
        <name evidence="3" type="ORF">LAX5112_00444</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.4.13.9" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64912.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670404.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00444"/>
    <dbReference type="EnsemblBacteria" id="CTQ64912">
        <property type="protein sequence ID" value="CTQ64912"/>
        <property type="gene ID" value="LAX5112_00444"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102009">
        <property type="term" value="F:proline dipeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.350.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029149">
        <property type="entry name" value="Creatin/AminoP/Spt16_NTD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036005">
        <property type="entry name" value="Creatinase/aminopeptidase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000587">
        <property type="entry name" value="Creatinase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014335">
        <property type="entry name" value="Ectoine_EutD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000994">
        <property type="entry name" value="Pept_M24"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01321">
        <property type="entry name" value="Creatinase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00557">
        <property type="entry name" value="Peptidase_M24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53092">
        <property type="entry name" value="SSF53092"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55920">
        <property type="entry name" value="SSF55920"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02993">
        <property type="entry name" value="ectoine_eutD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0224">Dipeptidase</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0645">Protease</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Creatinase_N" evidence="2">
        <location>
            <begin position="16"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_M24" evidence="1">
        <location>
            <begin position="168"/>
            <end position="376"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00557"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01321"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ64912.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="395" mass="44494" checksum="30F83FFE8250AE24" modified="2015-12-09" version="1">MIELTLRFSRDEYQRRVDKTRKAMEAAGLELLIVSDPSNMNWLTGYDGWSFYVHQAVLLSLDGEPVWFGRGQDANGALRTCFMDHANIIGYPDYYVQSTERHPMDFLSAKIEERGWANLSIGVEMDNYYFSAAAFASLQKYLPNARFQDANAFVNWQRAVKSAPELDYMRIAGKKVEKIHARILEKAEPGLRKCDLVAEIYDAGLRYDAVLDAGGDYPAIVPLVPSGSDAAAPHLTWDDQPMKSGEGTFFEVAGVHNRYHCPLSRTLYIGKPPQKFLDAEKSVLEGLEAGLEVAKAGNLCEDVAHAFFKVLKKYGFTKDNRTGYSIGVSYPPDWGERTMSLRSGDTSVLEENMTFHFMTGLWMEDWGFEITESIVIGTNEPECLANVPRRLFVKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRT8</accession>
    <name>A0A0M6ZRT8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">2-dehydro-3-deoxy-6-phosphogalactonate aldolase</fullName>
            <ecNumber evidence="2">4.1.2.21</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">dgoA</name>
        <name evidence="2" type="ORF">LAX5112_00623</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the KHG/KDPG aldolase family.</text>
    </comment>
    <dbReference type="EC" id="4.1.2.21" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65438.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670578.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00623"/>
    <dbReference type="EnsemblBacteria" id="CTQ65438">
        <property type="protein sequence ID" value="CTQ65438"/>
        <property type="gene ID" value="LAX5112_00623"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008674">
        <property type="term" value="F:2-dehydro-3-deoxy-6-phosphogalactonate aldolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd00452">
        <property type="entry name" value="KDPG_aldolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000887">
        <property type="entry name" value="Aldlse_KDPG_KHG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031338">
        <property type="entry name" value="KDPG/KHG_AS_2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30246">
        <property type="entry name" value="PTHR30246"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01081">
        <property type="entry name" value="Aldolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00160">
        <property type="entry name" value="ALDOLASE_KDPG_KHG_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006906"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65438.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="204" mass="21140" checksum="710FEF1A5B62E415" modified="2015-12-09" version="1">MSRHIIAILRGLTPSEALPVTEVLIEAGITKIEVPLNSPEPLKSIEAMAKAYSERAEIGAGTVLEAEQVHQVKTAGGTLIVSPDCNPDVIRITKAEGMSSFPGVMTPTECFSALRNGADGLKFFPATLIGPDGLKAMLAVLPKGTKTYAVGGAGPDNFDHWLKAGATGFGIGTALFKSGFTVDEIKARAEAVVTAYDAAVSANG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZS01</accession>
    <name>A0A0M6ZS01_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Streptogramin A acetyltransferase</fullName>
            <ecNumber evidence="1">2.3.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">vatD_1</name>
        <name evidence="1" type="ORF">LAX5112_00512</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.3.1.-" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65107.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670459.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00512"/>
    <dbReference type="EnsemblBacteria" id="CTQ65107">
        <property type="protein sequence ID" value="CTQ65107"/>
        <property type="gene ID" value="LAX5112_00512"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016746">
        <property type="term" value="F:acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001451">
        <property type="entry name" value="Hexapep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011004">
        <property type="entry name" value="Trimer_LpxA-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00132">
        <property type="entry name" value="Hexapep"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51161">
        <property type="entry name" value="SSF51161"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ65107.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="226" mass="25093" checksum="8BB3ECBAFDBDB5AC" modified="2015-12-09" version="1">MHGPIPDYTYPFNGEPHTVFLKNVITRPNIEVGDYTYYHHDSHAAEFESRNVRYHFDFVGDKLRIGRFCALASGTTFIMNGANHAMTGFSTYPFNIFGNGWEEEFDPATIFDHLRGDTLVQHDVWFGTNSVIMPGVTICSGAIIGAHAVVASDIPPFAIAVGNPAQVIKMRFGERTIERLLDIAWWDWPVEKISRNLSAIRASDIDALESAAMEPANMLDATAQAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZS36</accession>
    <name>A0A0M6ZS36_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Cupin domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00260</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64334.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008191250.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ64334">
        <property type="protein sequence ID" value="CTQ64334"/>
        <property type="gene ID" value="LAX5112_00260"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013096">
        <property type="entry name" value="Cupin_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07883">
        <property type="entry name" value="Cupin_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cupin_2" evidence="1">
        <location>
            <begin position="21"/>
            <end position="92"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64334.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="95" mass="10497" checksum="23CB99EABE9FED8D" modified="2015-12-09" version="1">MTRPAATSETLIDDDRVRVTRFDFEPGAETGWHRHGFDYVITAVTDCQMLLEEPGGTSRTVAVPAGTAYRRSEGVEHNVINGGDKPMSFVEVELK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSB6</accession>
    <name>A0A0M6ZSB6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">barA_1</name>
        <name evidence="10" type="ORF">LAX5112_00715</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65669.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670650.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00715"/>
    <dbReference type="EnsemblBacteria" id="CTQ65669">
        <property type="protein sequence ID" value="CTQ65669"/>
        <property type="gene ID" value="LAX5112_00715"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.160">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036641">
        <property type="entry name" value="HPT_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035965">
        <property type="entry name" value="PAS-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008207">
        <property type="entry name" value="Sig_transdc_His_kin_Hpt_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01627">
        <property type="entry name" value="Hpt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47226">
        <property type="entry name" value="SSF47226"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55785">
        <property type="entry name" value="SSF55785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50894">
        <property type="entry name" value="HPT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="10" id="KW-0418">Kinase</keyword>
    <keyword evidence="3 5" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Histidine kinase" evidence="7">
        <location>
            <begin position="175"/>
            <end position="396"/>
        </location>
    </feature>
    <feature type="domain" description="Response regulatory" evidence="8">
        <location>
            <begin position="565"/>
            <end position="683"/>
        </location>
    </feature>
    <feature type="domain" description="HPt" evidence="9">
        <location>
            <begin position="731"/>
            <end position="824"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="6">
        <location>
            <begin position="120"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="5">
        <location>
            <position position="614"/>
        </location>
    </feature>
    <feature type="modified residue" description="Phosphohistidine" evidence="4">
        <location>
            <position position="770"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50894"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ65669.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="824" mass="90335" checksum="3A41DFF42F75AADA" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSH0</accession>
    <name>A0A0M6ZSH0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00274</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64373.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670254.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00274"/>
    <dbReference type="EnsemblBacteria" id="CTQ64373">
        <property type="protein sequence ID" value="CTQ64373"/>
        <property type="gene ID" value="LAX5112_00274"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021269">
        <property type="entry name" value="DUF2848"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11010">
        <property type="entry name" value="DUF2848"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ64373.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="217" mass="23573" checksum="C080A3A1CCB30F55" modified="2015-12-09" version="1">MKFTTSEGVLESTPQRLIVAGWTGRNKAAVDHHIAELEAIGVPAPSTVPLYYQCAPELLTQAPQIQVVGKETSGEAEPFLIGINGRIWLGLASDHTDRALETYSVAHSKQIAAKPVAGELWPFESVRGHPDEIVLQSWILEEGAWTLYQDGTLAAIRPLRDLMDGANFQDGTAMLCGTLPAIGGVRPAADFKMRMYDPKTSREITWAYSTLALDAVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSP5</accession>
    <name>A0A0M6ZSP5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00557</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65236.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670493.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00557"/>
    <dbReference type="EnsemblBacteria" id="CTQ65236">
        <property type="protein sequence ID" value="CTQ65236"/>
        <property type="gene ID" value="LAX5112_00557"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012469">
        <property type="entry name" value="DUF1688"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31687">
        <property type="entry name" value="PTHR31687"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07958">
        <property type="entry name" value="DUF1688"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ65236.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="417" mass="45333" checksum="E1CB9188AB91A033" modified="2015-12-09" version="1">MTTKAQNDSGLLETFKAERVRSVANTLLDRALADHLDHVTVDISKLDQALIEILETAKQAYPDFQIPPYGVWRLFEAGGVDRWSALASARNFQSADELLAAASDLAILAAYMDVKTPQGWSYEDTMAGTVATGREATALAVINMFAAGSFSSDPVDPFRVDADAMIRLEIEELATGLQISAEQEEEFLKHLQRQLKRFGEALALRPDLFGEGQSTRPGNLVVKVGSEGWGSVDATVLLDRLLQSLAPLWEGGAAERDVAFGDSFAHSVKANSANQEIVPFHLNAQRMVYSLVEPLAWAGYEVDELDTLTGPGDAEHAGLFVNTGVLGFKSETGDLSDDQALDRHTEVRAVTIALTDRLAAMLRKELDVEQEQLPLSCILEGGTSRAGAAIVSENQDLREKLEKIMNPGSIFWLPFGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSX2</accession>
    <name>A0A0M6ZSX2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Ribose transport system permease protein RbsC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">rbsC_2</name>
        <name evidence="7" type="ORF">LAX5112_00781</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65855.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008190248.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00781"/>
    <dbReference type="EnsemblBacteria" id="CTQ65855">
        <property type="protein sequence ID" value="CTQ65855"/>
        <property type="gene ID" value="LAX5112_00781"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001851">
        <property type="entry name" value="ABC_transp_permease"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02653">
        <property type="entry name" value="BPD_transp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="21"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="54"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="81"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="107"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="131"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="173"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="227"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="252"/>
            <end position="274"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="281"/>
            <end position="301"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="307"/>
            <end position="325"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ65855.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="332" mass="34768" checksum="5FDF7D2A843AE21D" modified="2015-12-09" version="1">MTLQTTTETLPAPSRFSVRTVLQNAGIGLALLALIIFFSVFTEHFLTPNNITNILTQITINLVLAVGMTFVILIGGIDLSVGSVMAFAAVVAGKAITLPGFGPAEAIALAVIAATLTGVLCGFINGAISAYWALPSFIITLGMLNIARGAALQVSDAQTIYSFPYAFEEFGSAMIYGVPVVFLVALVLVFVAWFVLNFTVFGRLLYGIGNNEEAVRLAGHSVRRYKIAAFTICGFTAGIAAVVYMARLNISSPIAGIGFELNAIAAVIIGGTSLSGGRGSVIGTLLGAFIIGVLANGLILIGLSDFMRQMITGVVIIFAVILDHYRAKYAAT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZT70</accession>
    <name>A0A0M6ZT70_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">3-succinoylsemialdehyde-pyridine dehydrogenase</fullName>
            <ecNumber evidence="5">1.2.1.83</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ald_1</name>
        <name evidence="5" type="ORF">LAX5112_00826</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="3">Belongs to the aldehyde dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.2.1.83" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65979.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670732.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ65979">
        <property type="protein sequence ID" value="CTQ65979"/>
        <property type="gene ID" value="LAX5112_00826"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016620">
        <property type="term" value="F:oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.309.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.605.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016161">
        <property type="entry name" value="Ald_DH/histidinol_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016163">
        <property type="entry name" value="Ald_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029510">
        <property type="entry name" value="Ald_DH_CS_GLU"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016162">
        <property type="entry name" value="Ald_DH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015590">
        <property type="entry name" value="Aldehyde_DH_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00171">
        <property type="entry name" value="Aldedh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53720">
        <property type="entry name" value="SSF53720"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00687">
        <property type="entry name" value="ALDEHYDE_DEHYDR_GLU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 3 5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aldedh" evidence="4">
        <location>
            <begin position="13"/>
            <end position="472"/>
        </location>
    </feature>
    <feature type="active site" evidence="2">
        <location>
            <position position="247"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU003345"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ65979.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="474" mass="50848" checksum="9CBAFE80EF5F0285" modified="2015-12-09" version="1">MLDKRHFYIDGQWVAPTEAKDIDVINPATEQPVAVISLGGEADLNKAVDAAKTAFETWSESPVEERVALFERIIEIYNRRSAEMDEAIRLEMGAPTKFAREQQTPSGSGHFEATLEALKSHQWERPSPRGGSTLRDEPIGVCGLITPWNWPINQIAAKVAPALAAGCTMVLKPSEIAPLSAMLFAEILDEAGCSKGVFNLVNGDGLGIGVPMSSHPDIDMVSFTGSTRAGTSVSQNAAATVKRVALELGGKSANILFADADLETAVQFSVEGCFANSGQSCDAPTRLLVERSVYDEVLALANRFASETTVGDPQQDGDHIGPVVSQLQFDRIQSHIEAGIKEGTKLLAGGAGKPEGLETGYYVRPTIFADVSNDMHVAREEIFGPVLAILPFETEEDAVRIANDTPYGLAAYIQTGDPERAGRVARKLRAGNVYINGAGIDYDVPFGGYKQSGNGREFGQFGLEDFLELKAITA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTM7</accession>
    <name>A0A0M6ZTM7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">2-keto-3-deoxy-galactonokinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00624</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65440.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670579.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00624"/>
    <dbReference type="EnsemblBacteria" id="CTQ65440">
        <property type="protein sequence ID" value="CTQ65440"/>
        <property type="gene ID" value="LAX5112_00624"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008671">
        <property type="term" value="F:2-dehydro-3-deoxygalactonokinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034194">
        <property type="term" value="P:D-galactonate catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.310">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007729">
        <property type="entry name" value="DGOK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042257">
        <property type="entry name" value="DGOK_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042258">
        <property type="entry name" value="DGOK_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05035">
        <property type="entry name" value="DGOK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0418">Kinase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ65440.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="306" mass="32648" checksum="5BE7564AB4914A60" modified="2015-12-09" version="1">MSGQDDIAWIAADWGTTNLRIWALDAANTTVLHKASARGMSTLAPDEFEGALLEFIGAFLPENRTIPVIICGMAGSRQGWREAPYRETPCAPPGVSNATIVEPVDPRLSVHILPGIKQTAPADVMRGEETQIAGFLSDHPSFTGLICLPGTHTKWVVLEEGIITGFRTSMTGEVFALLKDKSVLQHSLAQEGYCDTSFEAAVKEITRSPERLTSELFGIRASSLIAGQTPEAATGRLSGLLIGAELAAVASEFDLQNTAILGTDQLSRVYGAALGILGHQSALLDAESYTVKGLSLAYEAHLKETK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZU97</accession>
    <name>A0A0M6ZU97_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Mercuric reductase</fullName>
            <ecNumber evidence="11">1.16.1.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">merA</name>
        <name evidence="11" type="ORF">LAX5112_00508</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
        <text evidence="6">Binds 1 FAD per subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 8">Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.</text>
    </comment>
    <dbReference type="EC" id="1.16.1.1" evidence="11"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65094.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670457.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00508"/>
    <dbReference type="EnsemblBacteria" id="CTQ65094">
        <property type="protein sequence ID" value="CTQ65094"/>
        <property type="gene ID" value="LAX5112_00508"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016152">
        <property type="term" value="F:mercury (II) reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016668">
        <property type="term" value="F:oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045454">
        <property type="term" value="P:cell redox homeostasis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.390.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023753">
        <property type="entry name" value="FAD/NAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016156">
        <property type="entry name" value="FAD/NAD-linked_Rdtase_dimer_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001100">
        <property type="entry name" value="Pyr_nuc-diS_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004099">
        <property type="entry name" value="Pyr_nucl-diS_OxRdtase_dimer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012999">
        <property type="entry name" value="Pyr_OxRdtase_I_AS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07992">
        <property type="entry name" value="Pyr_redox_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02852">
        <property type="entry name" value="Pyr_redox_dim"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000350">
        <property type="entry name" value="Mercury_reductase_MerA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55424">
        <property type="entry name" value="SSF55424"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00076">
        <property type="entry name" value="PYRIDINE_REDOX_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 6 8" id="KW-0274">FAD</keyword>
    <keyword evidence="2 8" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="6" id="KW-0520">NAD</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4 8 11" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5 8" id="KW-0676">Redox-active center</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Pyr_redox_2" evidence="10">
        <location>
            <begin position="8"/>
            <end position="323"/>
        </location>
    </feature>
    <feature type="domain" description="Pyr_redox_dim" evidence="9">
        <location>
            <begin position="343"/>
            <end position="451"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="53"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="117"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="178"/>
            <end position="185"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="201"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="268"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="308"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="disulfide bond" description="Redox-active" evidence="7">
        <location>
            <begin position="44"/>
            <end position="49"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007532"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR000350-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR000350-4"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU003691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF02852"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF07992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ65094.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="476" mass="49731" checksum="FB938B7B89606B3E" modified="2015-12-09" version="1">MAKLLTPDICVIGAGSGGLSVAAAAAAFGVDVVLIEKGKMGGDCLNYGCVPSKALLAAGKAAKQAQGSAAFGIHAGAAEISFSEANDHVRSVIAAIEPHDSQERFEGLGVTVLREHGQFTSPDCVSAGDHEIKARRFVIAAGSSALVPPIPGLDEVPYLINETLFNLRETPEHLGIIGGGPIGLEMAQAHRRLGAKVTVFEAQTALGKDDPELAGIVLDALKDEGIEILQKTAVERVEKTGDGIAVTARNEAGDTVTQTVSHLLVATGRAPNVDSLGLEAAGVDFSKKGITVDKGLRTSNRKIYAIGDIAGGLQFTHVAGYQAGLVIRSILFRLPVSMDNDQVPWVTYTSPELGHVGLSEAAARDRFGDKVKVLTADYSGNDRAQAEAVTTGRLKLIAGPGGRLLGAEIVGAQAGEIINLLSLALSKKLKMKDLAGFIAPYPTLGELVRRAAISYYADMPKSGWLRFGIGILRKFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUB8</accession>
    <name>A0A0M6ZUB8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00945</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66375.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008193965.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ66375">
        <property type="protein sequence ID" value="CTQ66375"/>
        <property type="gene ID" value="LAX5112_00945"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ66375.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="62" mass="6482" checksum="7B81A36EE0C2001D" modified="2015-12-09" version="1">MLNRLFVIIFLAIVLGGPFIALLAITDGTKAFGNEIQQKSVCLMTGTGCGNGNLVVTVASRI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUX2</accession>
    <name>A0A0M6ZUX2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Methionine gamma-lyase</fullName>
            <ecNumber evidence="5">4.4.1.11</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">mdeA_1</name>
        <name evidence="5" type="ORF">LAX5112_01005</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 4">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 4">Belongs to the trans-sulfuration enzymes family.</text>
    </comment>
    <dbReference type="EC" id="4.4.1.11" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66538.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670907.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01005"/>
    <dbReference type="EnsemblBacteria" id="CTQ66538">
        <property type="protein sequence ID" value="CTQ66538"/>
        <property type="gene ID" value="LAX5112_01005"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018826">
        <property type="term" value="F:methionine gamma-lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016765">
        <property type="term" value="F:transferase activity, transferring alkyl or aryl (other than methyl) groups"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019346">
        <property type="term" value="P:transsulfuration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00614">
        <property type="entry name" value="CGS_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000277">
        <property type="entry name" value="Cys/Met-Metab_PyrdxlP-dep_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006235">
        <property type="entry name" value="OAc-hSer/O-AcSer_sulfhydrylase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01053">
        <property type="entry name" value="Cys_Met_Meta_PP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001434">
        <property type="entry name" value="CGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01326">
        <property type="entry name" value="OAH_OAS_sulfhy"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00868">
        <property type="entry name" value="CYS_MET_METAB_PP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0456">Lyase</keyword>
    <keyword evidence="3 4" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="modified residue" description="N6-(pyridoxal phosphate)lysine" evidence="3">
        <location>
            <position position="209"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009077"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR001434-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU362118"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ66538.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="426" mass="45204" checksum="A050CC906F2FC85B" modified="2015-12-09" version="1">MSENIPGFSTLAIHAGATPDPSTGARVTPIYQTSSFVFDDVDHAASLFGLQAFGNIYTRITNPTTAVLEERVAALEGGTAALATASGHSAQLLCFHTLMQPGDNIVAANKLYGGSINQLNHSFKSFGWGVKWADPSDMASFEAAIDDKTRAIFIESLANPGGIIVDIEAIAAIAKAKGVPLVVDNTMASPYLCRPIEHGADIVLHSLTKFMGGHGNSMGGIIVDGGSFDWSASGNYPLLSSPRPEYQNMVLHETFGNFAFAIACRVLGLRDLGPAISPFNAFMILTGIETLPLRMQRHSDNAKKVALHLSGHDKVKWVSYAALPEDPHHALQQKYMPKGAGAVFTFGVEGGYDAGVNLVSKVELFSHLANIGDTRSLIIHPASTTHRQLSDEQKTSAGAGPEVVRISVGLEDVDDIIADLEQALAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZV53</accession>
    <name>A0A0M6ZV53_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Ribonuclease Z</fullName>
            <ecNumber evidence="3">3.1.26.11</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">rnz</name>
        <name evidence="3" type="ORF">LAX5112_00811</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.26.11" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65940.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008189598.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ65940">
        <property type="protein sequence ID" value="CTQ65940"/>
        <property type="gene ID" value="LAX5112_00811"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042781">
        <property type="term" value="F:3'-tRNA processing endoribonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.15.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001279">
        <property type="entry name" value="Metallo-B-lactamas"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036866">
        <property type="entry name" value="RibonucZ/Hydroxyglut_hydro"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12706">
        <property type="entry name" value="Lactamase_B_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00849">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56281">
        <property type="entry name" value="SSF56281"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005808984" evidence="1">
        <location>
            <begin position="24"/>
            <end position="352"/>
        </location>
    </feature>
    <feature type="domain" description="Lactamase_B" evidence="2">
        <location>
            <begin position="36"/>
            <end position="258"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ65940.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="352" mass="37301" checksum="B7591888776FEAD7" modified="2015-12-09" version="1">MFRTLISGLLFSAGALMAQPALAENCLKVTLTGTQGGPPVFQGQAGAGTLVQYGSEENKCNDMRLQFDTGRGTTQRLSQAGVPVGKIDAIFLSHLHSDHTEGLADMMQLRWHFNSGGPKVDLVCSEETKSPLGFSLSCERFATHIGDALINSGEIAQRLAENKKRLPGGPAELINVKDFKPQDEAQEVWSKGDVTVSAIRSTHIPGHASYRVDTPAGSVVIGGDAGNDVRKPPRETSTSGQVEKLAQGADIVVHSTIHPVMGPDGGTGFPPPIYFRQSNATDLGHLARRAGVKHLMLTHLIPPVGAPRQGPYKLPEGALTNEDYTGAVAESGFDGTTIVGQDLVSLTLPVKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVX4</accession>
    <name>A0A0M6ZVX4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Type VI secretion protein, family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01140</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66915.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670994.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01140"/>
    <dbReference type="EnsemblBacteria" id="CTQ66915">
        <property type="protein sequence ID" value="CTQ66915"/>
        <property type="gene ID" value="LAX5112_01140"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010732">
        <property type="entry name" value="T6SS_TssG-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35564">
        <property type="entry name" value="PTHR35564"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06996">
        <property type="entry name" value="T6SS_TssG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03347">
        <property type="entry name" value="VI_chp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="322"/>
            <end position="369"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66915.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="369" mass="40653" checksum="6D04ED7B245766A6" modified="2015-12-09" version="1">MTEVVEATDKHQALAGHLAHSQFFQLVYLIGLMHADVNKMGPGHAPKDEPIQFRATRSLSFGASDVSEISYNESRDKFDIRVNFLGLYGPASPLPPNVTERIIESDENPSSLEDLLDLFNHRLTILLYQIWRRSRHYIRFEDHGLDATSKCFLALCGFPIEDRAEIGSVARSALLPHVGLMSLYSNSAEAVASVLSSFFKVPCEIIEYVNRHVVMGEDSQISLGVRNTLLGGDMVLGEEVEDDLGKFTVRMGPASYEKLKPFMPGGERHPEIAELLAMVMRDPLDWDLQFVFKEDTVTAGKVGDIRLGVSLWLDAEEDSQLENPVQLTGLPLGSGPDYTGEQEHATPKTSGHVPGTGAADKQSNGLMVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWF4</accession>
    <name>A0A0M6ZWF4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Ubiq_cyt_C_chap domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01029</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UPF0174 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66607.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670920.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01029"/>
    <dbReference type="EnsemblBacteria" id="CTQ66607">
        <property type="protein sequence ID" value="CTQ66607"/>
        <property type="gene ID" value="LAX5112_01029"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021150">
        <property type="entry name" value="Ubiq_cyt_c_chap"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007129">
        <property type="entry name" value="Ubiqinol_cyt_c_chaperone_CPB3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014569">
        <property type="entry name" value="Ubq_cyt-c_CBP3-rel"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12184">
        <property type="entry name" value="PTHR12184"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03981">
        <property type="entry name" value="Ubiq_cyt_C_chap"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF032079">
        <property type="entry name" value="UCP032079"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ubiq_cyt_C_chap" evidence="2">
        <location>
            <begin position="33"/>
            <end position="171"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006436"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF03981"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ66607.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="181" mass="20393" checksum="5F665445EC10CC7F" modified="2015-12-09" version="1">MILGLFRRRSRDAAHKTYCEIVAQARQPVFYTDFLVPDTIDGRFDLIVLHAVLYFMRMQGEGKKVAEFTQDVFDLFFQDMDASLRELGVSDTRVPKKVRKMGEAFFGRADAYMAAVEAGNAEDLAQALGRNIYTEKEEPIAQERLASYVIAASAELTGQDTQDLLNGNINWPDPARFLTGN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZX60</accession>
    <name>A0A0M6ZX60_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Nickel transport system permease protein NikB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">nikB_1</name>
        <name evidence="8" type="ORF">LAX5112_01336</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="6">Cell membrane</location>
            <topology evidence="6">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67335.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451754.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01336"/>
    <dbReference type="EnsemblBacteria" id="CTQ67335">
        <property type="protein sequence ID" value="CTQ67335"/>
        <property type="gene ID" value="LAX5112_01336"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045621">
        <property type="entry name" value="BPD_transp_1_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19300">
        <property type="entry name" value="BPD_transp_1_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="9"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="114"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="149"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="199"/>
            <end position="219"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="261"/>
            <end position="282"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="302"/>
            <end position="329"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="7">
        <location>
            <begin position="110"/>
            <end position="325"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ67335.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="340" mass="37756" checksum="AC83FCBAC027F707" modified="2015-12-09" version="1">MLYYIVRRILMMIPTLFVISFLVFFIIELPTGDYISNQIAALKTSGEQSSIAKLEFLRKEFSLDRPFFERYLIWVGLWPGPHGLDGLLQGNWGWSFEFDKPVAEVVGPTLPLTIVLNFATILFVYVMSFPIGIYSATRQYSWGDYGFTFIGYVGLATPNFLLALILLYFFNQWFGLAVGGLMAPEYIDQPWSFDKAMSVLAHLIVPTIVIGTSGTAGMIRRLRANLLDELHKQYVTTGRAKGLKEGQLLIKYPLRMAINPFIADIGNLIPSLVSGSVIVSVVMSLPTVGPVLLSALQSQDQFLAGFVLLFVAVLTLIGMLISDLLLAVLDPRIRLGGRAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXH8</accession>
    <name>A0A0M6ZXH8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">(R)-specific enoyl-CoA hydratase</fullName>
            <ecNumber evidence="1">4.2.1.119</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">phaJ_2</name>
        <name evidence="1" type="ORF">LAX5112_00918</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="4.2.1.119" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66233.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670802.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00918"/>
    <dbReference type="EnsemblBacteria" id="CTQ66233">
        <property type="protein sequence ID" value="CTQ66233"/>
        <property type="gene ID" value="LAX5112_00918"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029069">
        <property type="entry name" value="HotDog_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54637">
        <property type="entry name" value="SSF54637"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0456">Lyase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ66233.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="123" mass="13340" checksum="A425124EF677F79B" modified="2015-12-09" version="1">MFEVGQRDEIKRSYTVTDMADFAALAGPKSVAPETVPGPLIGGLFSYLLGVKLPGRGTNYLKQSLEFLMPAPIGEELTASVTITRLRPEKHLVDLETVCETADGTRICQGRALVYVEDVGKGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXW6</accession>
    <name>A0A0M6ZXW6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Neu5Ac permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">siaT_11</name>
        <name evidence="5" type="ORF">LAX5112_01170</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66992.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671016.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01170"/>
    <dbReference type="EnsemblBacteria" id="CTQ66992">
        <property type="protein sequence ID" value="CTQ66992"/>
        <property type="gene ID" value="LAX5112_01170"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010656">
        <property type="entry name" value="DctM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004681">
        <property type="entry name" value="TRAP_DctM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33362">
        <property type="entry name" value="PTHR33362"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06808">
        <property type="entry name" value="DctM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006066">
        <property type="entry name" value="HI0050"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00786">
        <property type="entry name" value="dctM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="6"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="75"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="108"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="156"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="187"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="241"/>
            <end position="274"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="295"/>
            <end position="321"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="333"/>
            <end position="361"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="373"/>
            <end position="393"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="413"/>
            <end position="441"/>
        </location>
    </feature>
    <feature type="domain" description="DctM" evidence="4">
        <location>
            <begin position="11"/>
            <end position="437"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF06808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ66992.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="446" mass="46756" checksum="EBB817D353ADE46E" modified="2015-12-09" version="1">MDPATIGLIAFAFMLILLAMRVPIAFALIGVATAAAFMIFALRTGTFMPERAFRATSAMVFSNSFDLIHSFDLSMIPLFVALGNIAYKAGITTAVYNSARVWLVQLRGGVAMASVIGCGGFSAISGSSVACASTMGKICTPEMLRLGYDPKLATSSVAAGGTLGSLIPPSVLFIIYAIFTETSVSKLFVAGVLPGILTLLGFLLVIAAWIAIDPKVAPAKEAPASREEKIQAAKEAWPAALIFLIIVVGIYGGFFTATAAAAVSVVVTTAIGFMQRRLSLPDLWHAVRDTVIQTSSLFIVAAAAKIFVSAIALTGIAPALVQAVSEAQLSPAMLLFCICLVYILLGMFLDPIGIMVLTLPLMIPLVEANGMDLIWFGVVVVKLLEIGLITPPVGLNVFVLANVVGKEAPVGTIFAGIWRFLAVDLVVLALIVSFPAISLILSEAVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZY28</accession>
    <name>A0A0M6ZY28_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01267</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67207.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67207">
        <property type="protein sequence ID" value="CTQ67207"/>
        <property type="gene ID" value="LAX5112_01267"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67207.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="143" mass="16091" checksum="5D92CEFFF8FE5DD6" modified="2015-12-09" version="1">MNYSRAVFLINDQLRAIKCTYDEHGTETLFKTLDPTIEEGDLVVVPTDTRHGMTVVKVTEVDVDIDIDAPGNVNWIVCPVDQDTHEKNVASEKTAISKIKSAENRRKREQLRDSLFADHQETLKSLELAHMSDDKPAELGSPE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZY39</accession>
    <name>A0A0M6ZY39_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">YceI domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01493</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67718.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671304.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01493"/>
    <dbReference type="EnsemblBacteria" id="CTQ67718">
        <property type="protein sequence ID" value="CTQ67718"/>
        <property type="gene ID" value="LAX5112_01493"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.128.110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007372">
        <property type="entry name" value="Lipid/polyisoprenoid-bd_YceI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036761">
        <property type="entry name" value="TTHA0802/YceI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04264">
        <property type="entry name" value="YceI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00867">
        <property type="entry name" value="YceI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101874">
        <property type="entry name" value="SSF101874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="YceI" evidence="1">
        <location>
            <begin position="49"/>
            <end position="208"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00867"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67718.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="210" mass="23246" checksum="D1AEAF8DB7C4BE24" modified="2015-12-09" version="1">MTGNTARHMWRSQSCWKRFLASVHLSFLVGLCILVMSTADSRADILSGRYILPPQAVDTQFSVRVLGGQPVKGRFGTVKGEMVLNAQRPESSRVRVTVDLRSVETNNDRVTGFLKSSAMFNVSEFPTAEFESYSVRLIGETTAQVEGFLTMRGTRQRTSLEVELEPAGNRQTIAIEANGGFFRSLYGMDAGLPIYADKVRLQIKGTGKRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZY57</accession>
    <name>A0A0M6ZY57_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Transcriptional repressor BetI</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01500</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67738.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671309.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01500"/>
    <dbReference type="EnsemblBacteria" id="CTQ67738">
        <property type="protein sequence ID" value="CTQ67738"/>
        <property type="gene ID" value="LAX5112_01500"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023772">
        <property type="entry name" value="DNA-bd_HTH_TetR-type_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00440">
        <property type="entry name" value="TetR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00455">
        <property type="entry name" value="HTHTETR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01081">
        <property type="entry name" value="HTH_TETR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50977">
        <property type="entry name" value="HTH_TETR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH tetR-type" evidence="2">
        <location>
            <begin position="15"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="1">
        <location>
            <begin position="38"/>
            <end position="57"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ67738.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="211" mass="23537" checksum="8246DCC0A7531E95" modified="2015-12-09" version="1">MAIETKPRKPQARTALTRARILEAAAHLSKKKSLEEMTAEAIAREAGVAKGTIFAHFGDMDGLLSYLLLGELEKLREAADKNDKLSAQDLADPVAALVHRMMALIAVITESQTMLRVFLENIGATKGHCAPEFIEQLNALDEKLLQFLGFWQSSDDISPKLRSDRSPQEMLDGLIAFVIHGAIIFRSHQLKDLKELQSRLERHVEAFLVRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZY85</accession>
    <name>A0A0M6ZY85_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">UPF0386 protein LAX5112_01305</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01305</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UPF0386 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67277.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671131.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01305"/>
    <dbReference type="EnsemblBacteria" id="CTQ67277">
        <property type="protein sequence ID" value="CTQ67277"/>
        <property type="gene ID" value="LAX5112_01305"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00827">
        <property type="entry name" value="UPF0386"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018654">
        <property type="entry name" value="YjhX_toxin"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09857">
        <property type="entry name" value="YjhX_toxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67277.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="85" mass="9908" checksum="36ACC211ACFF0D60" modified="2015-12-09" version="1">MDISKAEQRVLHLLAQGGYILAEKDENGRILKYETITRDGWLWAGCSQQLFQKLKYRRLISSKNSGPYRITNLGLKRVRSQLDNR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYV7</accession>
    <name>A0A0M6ZYV7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Mannosylfructose-phosphate phosphatase</fullName>
            <ecNumber evidence="2">3.1.3.79</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">mfppA</name>
        <name evidence="2" type="ORF">LAX5112_01369</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.3.79" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67396.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01369"/>
    <dbReference type="EnsemblBacteria" id="CTQ67396">
        <property type="protein sequence ID" value="CTQ67396"/>
        <property type="gene ID" value="LAX5112_01369"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016791">
        <property type="term" value="F:phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006379">
        <property type="entry name" value="HAD-SF_hydro_IIB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006380">
        <property type="entry name" value="SPP_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05116">
        <property type="entry name" value="S6PP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01484">
        <property type="entry name" value="HAD-SF-IIB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="S6PP" evidence="1">
        <location>
            <begin position="10"/>
            <end position="242"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF05116"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67396.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="251" mass="26944" checksum="65AD8AC09CD8218E" modified="2015-12-09" version="1">MRAENDNAKPLLLVSDIDDTLTGDPAALDRLWQVLERHRGRLKIALNSSRPAGSVDETLRSYFPQSFAPDAVITGLGTEIRLQGTLLSSWSRQFDAWPDVQIRETVLKMGYTQHEPVFQTPGKASFAVPGPQQADLVIQRLNDAGFSFKHIFSGKSDLDILAPEAGKDAAMRHLADHLGIALQDTIAAGDSGNDLALFEAAGKAIAVGNARPELLAAMPKDKTYHAAAHNAAGVLEGLAAFNAIPQSDVEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZ59</accession>
    <name>A0A0M6ZZ59_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Bacterial extracellular solute-binding proteins, family 3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01444</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67591.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671269.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67591">
        <property type="protein sequence ID" value="CTQ67591"/>
        <property type="gene ID" value="LAX5112_01444"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="domain" description="PBPb" evidence="2">
        <location>
            <begin position="92"/>
            <end position="231"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00497"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ67591.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="237" mass="25461" checksum="BE3C6B005401268F" modified="2015-12-09" version="1">MLSLTFLLASGSLAADGCNKMTVAAAEIPHFVESESEGEFVVLLQSAAKRADLALDIRLYPKKRALGLFQMGVVDALMPHSSAGAEVASYKSLPILKKRDFAFVRKGGSVPSGVSELEGLRIGLTAQYAYPKSLTANDEIDFSREPNSDLDNIRMLSAGRLDGSIIEEQSGLRAIAEAGVDNVIYDETSPINELSVWILFAKTECGALHAEKINSAFRAMIKDGEWAAIKKADPPNG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZH2</accession>
    <name>A0A0M6ZZH2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">L-aminopeptidase/D-esterase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01496</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase S58 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67727.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040450778.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01496"/>
    <dbReference type="EnsemblBacteria" id="CTQ67727">
        <property type="protein sequence ID" value="CTQ67727"/>
        <property type="gene ID" value="LAX5112_01496"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004177">
        <property type="term" value="F:aminopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016117">
        <property type="entry name" value="ArgJ-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005321">
        <property type="entry name" value="Peptidase_S58_DmpA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36512">
        <property type="entry name" value="PTHR36512"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03576">
        <property type="entry name" value="Peptidase_S58"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56266">
        <property type="entry name" value="SSF56266"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0031">Aminopeptidase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0645">Protease</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007068"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67727.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="334" mass="33994" checksum="610BA4DAF8F0964A" modified="2015-12-09" version="1">MTGPRNLITDVPGLKVGNASDPDLKSGATVLVPDEPAVTSVAIQGGAPGTREIALLEPEQTVEKIDAIVLAGGSAFGLDAGAGVQGRLAELGYGYQVGPVRVPIVPTAILFDLLNGGNKSWGQMAPYRDLGRAALDSIGHDFVLGSNGAGMGATTANLKGGLGSASVVLENGVTIGAIVAVNALGRATMGETPHFWAAPFEVGNEFGGRGITPTLPADCTTVRTKLDALEAGANTTIAAVATDAILTKGEAKRLAVMAHDGLARALWPAHTPLDGDLVFALSTGQRKLENGLEDMVQMGAAAASCLARAIARGIYHATPADGDTLPTWQERFGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZZ3</accession>
    <name>A0A0M6ZZZ3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01709</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68358.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ68358">
        <property type="protein sequence ID" value="CTQ68358"/>
        <property type="gene ID" value="LAX5112_01709"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ68358.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="55" mass="6101" checksum="99A43754DC8AD710" modified="2015-12-09" version="1">MIRARPRQARKGGGAGVVASIIELDEFLIAGLRPGNLVFKSLDYHVFEAYQEQVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0V2</accession>
    <name>A0A0M7A0V2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01384</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67424.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671187.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67424">
        <property type="protein sequence ID" value="CTQ67424"/>
        <property type="gene ID" value="LAX5112_01384"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019056">
        <property type="entry name" value="Phage_TAC_6"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09550">
        <property type="entry name" value="Phage_TAC_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="53"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="60"/>
            <end position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67424.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="76" mass="8729" checksum="499E443070B43D5D" modified="2015-12-09" version="1">MLPWADLLRITATRWAWTPSEFWTATPRELEAVLGLGHPADGLKRSELEQLIRTNPDTATCGRADDHKERRPHDRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0W4</accession>
    <name>A0A0M7A0W4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="10">AzlC protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">LAX5112_01840</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the AzlC family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68678.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671553.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01840"/>
    <dbReference type="EnsemblBacteria" id="CTQ68678">
        <property type="protein sequence ID" value="CTQ68678"/>
        <property type="gene ID" value="LAX5112_01840"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011606">
        <property type="entry name" value="Brnchd-chn_aa_trnsp_permease"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03591">
        <property type="entry name" value="AzlC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="30"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="61"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="120"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="150"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="181"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="231"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="8">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010735"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ68678.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="253" mass="26823" checksum="A3544A45A3EC679D" modified="2015-12-09" version="1">MTASKDTGQPQLSSKPPVSGRSWMLRGARAAISIPAFILTSAFVGFAGMARETGLSLAETLLMTGAVWALPSVVVLTGAMASGMGVIPAAVAVALASVRLMPMTMALMPFLKVPGKTKTWHLLIASHFVAVTAWVYAMKNLPDLPREGRLPFFIGFGGGVTSFVFVSTGIAYMLVERMPPMAAGALVLVTPVYFLCSLWGAARMNADKAAMISGLALGPLFFLYFPGLDLLWTGLLGGTLAYLATRFWRRGLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0W8</accession>
    <name>A0A0M7A0W8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Flagellin</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">flaA_3</name>
        <name evidence="6" type="ORF">LAX5112_01689</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Secreted</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="3">Bacterial flagellum</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the bacterial flagellin family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68247.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671439.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01689"/>
    <dbReference type="EnsemblBacteria" id="CTQ68247">
        <property type="protein sequence ID" value="CTQ68247"/>
        <property type="gene ID" value="LAX5112_01689"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009288">
        <property type="term" value="C:bacterial-type flagellum"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005198">
        <property type="term" value="F:structural molecule activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001492">
        <property type="entry name" value="Flagellin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046358">
        <property type="entry name" value="Flagellin_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001029">
        <property type="entry name" value="Flagellin_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42792">
        <property type="entry name" value="PTHR42792"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00700">
        <property type="entry name" value="Flagellin_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00669">
        <property type="entry name" value="Flagellin_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3" id="KW-0975">Bacterial flagellum</keyword>
    <keyword evidence="6" id="KW-0966">Cell projection</keyword>
    <keyword evidence="6" id="KW-0969">Cilium</keyword>
    <keyword evidence="6" id="KW-0282">Flagellum</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0964">Secreted</keyword>
    <feature type="domain" description="Flagellin_N" evidence="4">
        <location>
            <begin position="11"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="domain" description="Flagellin_C" evidence="5">
        <location>
            <begin position="424"/>
            <end position="507"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005709"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023143"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU362073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00669"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00700"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ68247.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="507" mass="53508" checksum="9CFD22BE52F3495B" modified="2015-12-09" version="1">MSDITLSAAVRQNLLTLQTTADFMSGVQNKLATGKKVNSALDNPNSFFTASGLNARASDLGTLLDDMGQSVQTIKAADKGITTITELVKSAKAKANQALQTQSQYERKQFAAQYNDLLSQIEAVAKDSSYKGKNLLAGAGNDLTTIFNEDATSKLTMEAVDYTDTELSTGLNLTDLVEGQGGATAFNLSGGKVEITLTGADGALNSSSRLHESSGITTSTSLSFVEFLESGTPTLMGTHVSSSATVQDFINELNKTEGVRAEFDEKTGKLTILSNDNFRISDANVGAGTAITLGNAADITTAAYGSLTANLVDSASFAIGDTLTLTDGNNYELGSLEIDKETTVGDLVNFVNDFQGVDASFNDTTGRFSILAETDLTLASERNGATNTDFNAKDFNANNDGVVLSALEDSSFATDGDISRVVDRLNNALSTLRFQASEFGTNLSTIQHRQDYTTAMINTLQEGAGELTLADTNMEGANLLALQTRQQLASTSLSFASQADQTVLSLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1A8</accession>
    <name>A0A0M7A1A8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01886</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68785.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671584.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01886"/>
    <dbReference type="EnsemblBacteria" id="CTQ68785">
        <property type="protein sequence ID" value="CTQ68785"/>
        <property type="gene ID" value="LAX5112_01886"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007404">
        <property type="entry name" value="YdjM-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04307">
        <property type="entry name" value="YdjM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="90"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="124"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="160"/>
            <end position="178"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68785.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="355" mass="39639" checksum="5140884A707AE4D0" modified="2015-12-09" version="1">MDSITQFVLGAAVSTACLGKKIGPRKAALVGGLLGTVPDLDVLIPFADPVDSFVYHRGWTHSVFVHALAAPVFGELLVRLFKGLRELRWLTYLTVYLCFATHAMIDAMTVYGTRIFWPFYPDPVGVGSVFIIDPVYSLPLLFVVIWAFFKRDWTQRFGRWVGGVLVATSAYMLLSVGIQSHVEQRAEQIFASQGQVPEKIFAIAAPFNIALWKVIGLDEDRYQNLYLSLFDGDQEPEIYTHSRHPELVACVQNSDAYQKLDWFSRGFNRAELVDGKVVISDLRMGLTPGYAFRFAVGEQTDGGIVPMMPERDLSLRRADSEDFAWLGERLRGRPAMRAAEASENAAGTQVAERSC</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1H1</accession>
    <name>A0A0M7A1H1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01441</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67583.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01441"/>
    <dbReference type="EnsemblBacteria" id="CTQ67583">
        <property type="protein sequence ID" value="CTQ67583"/>
        <property type="gene ID" value="LAX5112_01441"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809179" evidence="2">
        <location>
            <begin position="41"/>
            <end position="364"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="41"/>
            <end position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ67583.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="364" mass="38895" checksum="DA3B7F686C99DA61" modified="2015-12-09" version="1">MQNPTTLLNRIKDTRAKVQRFVMTALCAVLISALPGTAQAQTNAPMPPAMKPDPNAPSAASQEPIQNLLDRDPEPLFSDNTLVPYAPASGSIQGTAEGLDGGALYLMAKLTRDSQPLNDNLIWRIYSETTNADGRLQLIATSKGGDAEFRLDPGAYMIHTSYGYAQATNRIVIGKEVLSKMVTLNAGGIKFDATLPDGAPLESGPVTFDIYSRVFDQRGERDLIASSVTPGSIIRLNADTYHIVSRYGDANAEIRADIQVLPGKLTEATIFHKAADITLKLVNERGGEAIANTTWSVLSPGGDVVVEATGAFPDFVLAAGEYEAVARNNGRTYLHTFTVEPGADREVEVVSSISELVSGSSRAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2K6</accession>
    <name>A0A0M7A2K6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">D-malate degradation protein R</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">dmlR_4</name>
        <name evidence="3" type="ORF">LAX5112_01904</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68837.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671598.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ68837">
        <property type="protein sequence ID" value="CTQ68837"/>
        <property type="gene ID" value="LAX5112_01904"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ68837.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="293" mass="31859" checksum="088A5CC57B334F41" modified="2015-12-09" version="1">MNWDDIRIFLGVARTGQILAAAKRLGLNHATVARRLTALEGSLGARLFDRSTSGCVLTDAGSRFFDRAEMMEAAALAAEADLGDDTPEISGIVRIGAPDGFGVAYLAPRLGLLTRQHPSLTVQLVPVSRSFSLSRREADIAVTIERPETGRLIAGKLVDYALGLYASKTYLMDRGIPETPSDLSAHDLIGYVEDLLYSASLNYGAEFFKGWTARFEVASALGQTEAVKAGAGIGILHDFIARADPSLVPVLPDMKLKRAYWMVTHESSRPLRHVAAVQDFLREQVAHDKAMFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2M5</accession>
    <name>A0A0M7A2M5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 5">50S ribosomal protein L32</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 7" type="primary">rpmF</name>
        <name evidence="7" type="ORF">LAX5112_02069</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the bacterial ribosomal protein bL32 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69318.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008193743.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02069"/>
    <dbReference type="EnsemblBacteria" id="CTQ69318">
        <property type="protein sequence ID" value="CTQ69318"/>
        <property type="gene ID" value="LAX5112_02069"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015934">
        <property type="term" value="C:large ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00340">
        <property type="entry name" value="Ribosomal_L32"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002677">
        <property type="entry name" value="Ribosomal_L32p"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044957">
        <property type="entry name" value="Ribosomal_L32p_bact"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011332">
        <property type="entry name" value="Ribosomal_zn-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35534">
        <property type="entry name" value="PTHR35534"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01783">
        <property type="entry name" value="Ribosomal_L32p"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57829">
        <property type="entry name" value="SSF57829"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01031">
        <property type="entry name" value="rpmF_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3 5" id="KW-0689">Ribosomal protein</keyword>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="14"/>
            <end position="39"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008560"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00021233"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00340"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ69318.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="61" mass="7073" checksum="144ED3539C29BFF1" modified="2015-12-09" version="1">MAVPKRKTSRMKRGFRRSSDALKQPTYVEDKDSGELRRPHHVDLKTGMYRGRQILSAKDDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2P4</accession>
    <name>A0A0M7A2P4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Ubiquinone/menaquinone biosynthesis methyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02076</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69338.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008194810.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02076"/>
    <dbReference type="EnsemblBacteria" id="CTQ69338">
        <property type="protein sequence ID" value="CTQ69338"/>
        <property type="gene ID" value="LAX5112_02076"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013216">
        <property type="entry name" value="Methyltransf_11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08241">
        <property type="entry name" value="Methyltransf_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <keyword evidence="2" id="KW-0830">Ubiquinone</keyword>
    <feature type="domain" description="Methyltransf_11" evidence="1">
        <location>
            <begin position="82"/>
            <end position="130"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08241"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69338.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="255" mass="28556" checksum="CBD5A43D59ACCDA6" modified="2015-12-09" version="1">MYLDVVHLRAFYDLPLGQLLRGLIGAPVAQMWPDIQGQSLLGLGYAGPFMRRYHGSAERVISAMPAPQGAIHWPREHANSCALVEDEALPFSDATFDRIMLVHALDHCSDPSAMLREVWRVLAPGGRVIVVVPNRRGLWARSELSPFGYGRPYSGSQLKELMKNCQFNVLSDSEALFMPPSRAVSIQRTARTWENLGRRFWPAFAGILILEAEKLVFRSLPVDGKKSRLRVLRPVFIPDGAATGLKPVRQERSEQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3G3</accession>
    <name>A0A0M7A3G3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Nuclease</fullName>
            <ecNumber evidence="3">3.1.30.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">nucA</name>
        <name evidence="3" type="ORF">LAX5112_01987</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.30.-" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69111.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671690.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01987"/>
    <dbReference type="EnsemblBacteria" id="CTQ69111">
        <property type="protein sequence ID" value="CTQ69111"/>
        <property type="gene ID" value="LAX5112_01987"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.570.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001604">
        <property type="entry name" value="DNA/RNA_non-sp_Endonuclease"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044929">
        <property type="entry name" value="DNA/RNA_non-sp_Endonuclease_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020821">
        <property type="entry name" value="Extracellular_endonuc_su_A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044925">
        <property type="entry name" value="His-Me_finger_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040255">
        <property type="entry name" value="Non-specific_endonuclease"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009003">
        <property type="entry name" value="Peptidase_S1_PA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13966">
        <property type="entry name" value="PTHR13966"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01223">
        <property type="entry name" value="Endonuclease_NS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00892">
        <property type="entry name" value="Endonuclease_NS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00477">
        <property type="entry name" value="NUC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50494">
        <property type="entry name" value="SSF50494"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54060">
        <property type="entry name" value="SSF54060"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Endonuclease_NS" evidence="2">
        <location>
            <begin position="388"/>
            <end position="597"/>
        </location>
    </feature>
    <feature type="domain" description="NUC" evidence="1">
        <location>
            <begin position="389"/>
            <end position="597"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ69111.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="633" mass="69286" checksum="0E65DA1B12E0312D" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3H1</accession>
    <name>A0A0M7A3H1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Signal recognition particle receptor FtsY</fullName>
            <shortName evidence="6">SRP receptor</shortName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6 9" type="primary">ftsY</name>
        <name evidence="9" type="ORF">LAX5112_02008</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Part of the signal recognition particle protein translocation system, which is composed of SRP and FtsY. SRP is a ribonucleoprotein composed of Ffh and a 4.5S RNA molecule.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Peripheral membrane protein</topology>
            <orientation evidence="2">Cytoplasmic side</orientation>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="6">Cell membrane</location>
            <topology evidence="6">Peripheral membrane protein</topology>
            <orientation evidence="6">Cytoplasmic side</orientation>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="6">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
            <orientation evidence="1">Cytoplasmic side</orientation>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the GTP-binding SRP family. FtsY subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69167.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671705.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02008"/>
    <dbReference type="EnsemblBacteria" id="CTQ69167">
        <property type="protein sequence ID" value="CTQ69167"/>
        <property type="gene ID" value="LAX5112_02008"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031226">
        <property type="term" value="C:intrinsic component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006614">
        <property type="term" value="P:SRP-dependent cotranslational protein targeting to membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00920">
        <property type="entry name" value="FtsY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013822">
        <property type="entry name" value="Signal_recog_particl_SRP54_hlx"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004390">
        <property type="entry name" value="SR_rcpt_FtsY"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036225">
        <property type="entry name" value="SRP/SRP_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000897">
        <property type="entry name" value="SRP54_GTPase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042101">
        <property type="entry name" value="SRP54_N_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43134:SF7">
        <property type="entry name" value="PTHR43134:SF7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00448">
        <property type="entry name" value="SRP54"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02881">
        <property type="entry name" value="SRP54_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00962">
        <property type="entry name" value="SRP54"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00963">
        <property type="entry name" value="SRP54_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47364">
        <property type="entry name" value="SSF47364"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00064">
        <property type="entry name" value="ftsY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00300">
        <property type="entry name" value="SRP54"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 6" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="6" id="KW-0472">Membrane</keyword>
    <keyword evidence="3 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5 6 9" id="KW-0675">Receptor</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SRP54" evidence="8">
        <location>
            <begin position="436"/>
            <end position="449"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="99"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="269"/>
            <end position="276"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="351"/>
            <end position="355"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="415"/>
            <end position="418"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004287"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004515"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00920"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS00300"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ69167.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="465" mass="48952" checksum="6853DFAB2DDF02A4" modified="2015-12-09" version="1">MSEKKRGFFGRLFGGKDAPDAPETPAVEAPEDTSPAAETPDETPTPVEMEVAPVAAMGSEPNVLSAQTGPDLSPQIAPTVPPVLPEVDISADLGADKIEPELPDAPVESSPDETATEKASEVLEPVETVEEPAEIEPEAETSAPTVPIVATPAPAPVEEEKLSWFQRLKKGLSRSSSALTDGISSILTKRKLDAAMLEELEDILIQADLGVDTAMAITERLSDGRYDKEISPEEVREILSEEVEKVLVPVAEPLDLNSGKKPHVVLMVGVNGTGKTTTIGKLSKKLREEGKTVMLAAGDTFRAAAVEQLKIWGERTGAVVIARDAGADAAGLAFDAMKEAAEKQVDVLLIDTAGRLQNKAELMDELEKVIRVIKTHDPDAPHTCLLTLDATTGQNALNQVEIFGKVAGVTGLVMTKLDGTARGGILVAIAAKHGLPVHFIGVGEGVEDLEPFSAKDFASAIAGLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3T1</accession>
    <name>A0A0M7A3T1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Membrane-bound lytic murein transglycosylase B</fullName>
            <ecNumber evidence="3">4.2.2.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">mltB_3</name>
        <name evidence="3" type="ORF">LAX5112_02054</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="4.2.2.-" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69277.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ69277">
        <property type="protein sequence ID" value="CTQ69277"/>
        <property type="gene ID" value="LAX5112_02054"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023346">
        <property type="entry name" value="Lysozyme-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043426">
        <property type="entry name" value="MltB-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031304">
        <property type="entry name" value="SLT_2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30163">
        <property type="entry name" value="PTHR30163"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13406">
        <property type="entry name" value="SLT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53955">
        <property type="entry name" value="SSF53955"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0456">Lyase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809259" evidence="1">
        <location>
            <begin position="26"/>
            <end position="275"/>
        </location>
    </feature>
    <feature type="domain" description="SLT_2" evidence="2">
        <location>
            <begin position="35"/>
            <end position="242"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13406"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ69277.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="275" mass="29864" checksum="20D2B91D34322C47" modified="2015-12-09" version="1">MTPRRAALRMVAIVAGTMMATPALAASCITSKGQFGAYKQQLAQQASASGVRQRGLQALQQAKLSGITWRFESNPASQSSMRYRSPEQFLKSRFSSVNTFVSGAKRKLKQNARLFQSIEKRYGVPGSILVAIWGYETNWGGYTGNTRIVSGAVTLASYCRRHPRFEDDAIAALQLVDRGLITGNSRGGPSGELGHMQFLAGNWVRFAVDGNRDGRADPNNAADALATAANMLRRNGWRAGRSFADGSANFRVLSTWNDSGNYQRAIAYAAGLIDQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4G5</accession>
    <name>A0A0M7A4G5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 5">50S ribosomal protein L35</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4 6" type="primary">rpmI</name>
        <name evidence="6" type="ORF">LAX5112_02097</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4 5">Belongs to the bacterial ribosomal protein bL35 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69392.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040452644.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02097"/>
    <dbReference type="EnsemblBacteria" id="CTQ69392">
        <property type="protein sequence ID" value="CTQ69392"/>
        <property type="gene ID" value="LAX5112_02097"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.410.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00514">
        <property type="entry name" value="Ribosomal_L35"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021137">
        <property type="entry name" value="Ribosomal_L35"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018265">
        <property type="entry name" value="Ribosomal_L35_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001706">
        <property type="entry name" value="Ribosomal_L35_non-mt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037229">
        <property type="entry name" value="Ribosomal_L35_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33343">
        <property type="entry name" value="PTHR33343"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01632">
        <property type="entry name" value="Ribosomal_L35p"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00064">
        <property type="entry name" value="RIBOSOMALL35"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF143034">
        <property type="entry name" value="SSF143034"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00001">
        <property type="entry name" value="rpmI_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00936">
        <property type="entry name" value="RIBOSOMAL_L35"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4 5" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4 5" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00514"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU000568"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ69392.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="65" mass="7179" checksum="2A722D54C756F043" modified="2015-12-09" version="1">MPKLKTKSGAKKRFKVTAGGKVKCAQAGKRHGMIKRSNKFIRNARGTTTLSDQDAKVVKQFLPYA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4J2</accession>
    <name>A0A0M7A4J2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02325</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70025.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70025">
        <property type="protein sequence ID" value="CTQ70025"/>
        <property type="gene ID" value="LAX5112_02325"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ70025.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="52" mass="5959" checksum="7425F09D2868711A" modified="2015-12-09" version="1">MFFNKLWMFGTSPNMTPEEKMGFVSRLRPLIRAVILLFHQEFAGGKTSLLLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5B7</accession>
    <name>A0A0M7A5B7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02445</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70278.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672046.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02445"/>
    <dbReference type="EnsemblBacteria" id="CTQ70278">
        <property type="protein sequence ID" value="CTQ70278"/>
        <property type="gene ID" value="LAX5112_02445"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018702">
        <property type="entry name" value="DUF2207_membrane"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09972">
        <property type="entry name" value="DUF2207"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="242"/>
            <end position="259"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="395"/>
            <end position="414"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="426"/>
            <end position="450"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="462"/>
            <end position="486"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="492"/>
            <end position="512"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="622"/>
            <end position="653"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="622"/>
            <end position="640"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ70278.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="653" mass="71589" checksum="6906EC283492D6A2" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A628</accession>
    <name>A0A0M7A628_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">N-acetyltransferase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02341</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70067.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02341"/>
    <dbReference type="EnsemblBacteria" id="CTQ70067">
        <property type="protein sequence ID" value="CTQ70067"/>
        <property type="gene ID" value="LAX5112_02341"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="8"/>
            <end position="153"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70067.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="153" mass="17062" checksum="26F7F1596EA53C8F" modified="2015-12-09" version="1">MSRTWQVLLGSPVNRRDVLGIVRKCREETGRTFNKHYESAISRFLVDASAGRIYLIDVRGVPAGFASVSFQQSVSWGGRLAVLEELQLLKAYEGQGLAQRVLRAIIGDLENFGPDVVVAYVREHDPLAAVYEIEGFSRTALIRYSDQESEETG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6K1</accession>
    <name>A0A0M7A6K1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">30S ribosomal protein S16</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3 5" type="primary">rpsP</name>
        <name evidence="5" type="ORF">LAX5112_02049</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="3">Belongs to the bacterial ribosomal protein bS16 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69264.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008196794.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02049"/>
    <dbReference type="EnsemblBacteria" id="CTQ69264">
        <property type="protein sequence ID" value="CTQ69264"/>
        <property type="gene ID" value="LAX5112_02049"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1320.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00385">
        <property type="entry name" value="Ribosomal_S16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000307">
        <property type="entry name" value="Ribosomal_S16"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023803">
        <property type="entry name" value="Ribosomal_S16_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12919">
        <property type="entry name" value="PTHR12919"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00886">
        <property type="entry name" value="Ribosomal_S16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54565">
        <property type="entry name" value="SSF54565"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00002">
        <property type="entry name" value="S16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="1 3 5" id="KW-0689">Ribosomal protein</keyword>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="88"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="88"/>
            <end position="114"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00385"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ69264.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="128" mass="14359" checksum="6099AA1510AA4411" modified="2015-12-09" version="1">MSTKIRLARGGSKKRPFYRIVVADIRAPRDGRFIEKVGSYNPMLPKDSEERVQLNVERIQYWLGNGAQPTDRVHRFLDAAGLLKREARNNPKKAQLGRKAQERLDEKKAAEEEAAAAAAEATEEAAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6K9</accession>
    <name>A0A0M7A6K9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">NTE family protein RssA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">rssA_2</name>
        <name evidence="4" type="ORF">LAX5112_02337</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70056.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671961.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02337"/>
    <dbReference type="EnsemblBacteria" id="CTQ70056">
        <property type="protein sequence ID" value="CTQ70056"/>
        <property type="gene ID" value="LAX5112_02337"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016042">
        <property type="term" value="P:lipid catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016035">
        <property type="entry name" value="Acyl_Trfase/lysoPLipase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002641">
        <property type="entry name" value="PNPLA_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01734">
        <property type="entry name" value="Patatin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52151">
        <property type="entry name" value="SSF52151"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51635">
        <property type="entry name" value="PNPLA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0442">Lipid degradation</keyword>
    <keyword evidence="1 2" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PNPLA" evidence="3">
        <location>
            <begin position="12"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="GXGXXG" evidence="2">
        <location>
            <begin position="16"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="GXSXG" evidence="2">
        <location>
            <begin position="43"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="DGA/G" evidence="2">
        <location>
            <begin position="171"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="2">
        <location>
            <position position="45"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="2">
        <location>
            <position position="171"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01161"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51635"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ70056.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="284" mass="30671" checksum="CFD441F6B43426B5" modified="2015-12-09" version="1">MLQNASHPKIGLALGGGGARGLAHIPVLEAFDDLGIRPHKIAGTSIGAIFGAGYAAGHSGEDLRAIALDLFADSNKVLSRFWKLGPKRIRDLFRAGPVQFDPVGVLEAFVAEHLPPRFEDLDVPLRILATDYFGCTEVDFETGPLLPAIAASISIPAVFRPVRHNDRFLIDGGVVNPLPFDGLREECDFVVAVDVVGAPVPRSNPADISMLDSIFGSSQILMQTITAQKLKLDQPDILIRPQHDNTRVLDFLKAGAILEKSETLRGVTRARLTELLNTTSDSIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A781</accession>
    <name>A0A0M7A781_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">HTH-type transcriptional regulatory protein GabR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">gabR_2</name>
        <name evidence="3" type="ORF">LAX5112_02594</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">In the C-terminal section; belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70739.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672179.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02594"/>
    <dbReference type="EnsemblBacteria" id="CTQ70739">
        <property type="protein sequence ID" value="CTQ70739"/>
        <property type="gene ID" value="LAX5112_02594"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009058">
        <property type="term" value="P:biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07377">
        <property type="entry name" value="WHTH_GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004839">
        <property type="entry name" value="Aminotransferase_I/II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000524">
        <property type="entry name" value="Tscrpt_reg_HTH_GntR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00155">
        <property type="entry name" value="Aminotran_1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00392">
        <property type="entry name" value="GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00035">
        <property type="entry name" value="HTHGNTR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00345">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50949">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH gntR-type" evidence="2">
        <location>
            <begin position="19"/>
            <end position="88"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005384"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ70739.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="489" mass="52652" checksum="F4EDFA7D1D367684" modified="2015-12-09" version="1">MKVPELLEGVCDLDRSSSVPLSQQIYRALREAVGQGRLKAGMRLPSSRSFAQQQGISRNTVNTAYELLKAEGIVEVSVGVAPVIVGGTLPEGAKIQSGNTVPLRGLSKRGNQLAKNLRGDSWGQRHEALQPGAPALDIFPYENWARCLRRAVRTVRSTDLLYQHPSGYPPLKAILADYLASERGVRATPDQILIVPSMQAALAGISQALSDPGDTAWIEDPGYMGARTAFHGAGLNIRGLPVDEYGVLPDGLQKDSPHPRLIYVTPSHQYPFGARLPLARRLALIENASRMGATILEDDYDSEFLFEGRPVAALQGLAGGGEVIYLGTFSKSLLPGLRVSYAVVPEDLCGPLVGVFRNMGQLANVHAQIALADFIDSGHYRAHLKRIRSVYQQRGNDLVAALKEVLGNAVSVEPPLGNVQVTVRFNEDLDDRNVARGMQARGFSVSPLSVCYLDAAPEPGLIIGFAGATEDQIRGGVRALSDLLSARLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7V2</accession>
    <name>A0A0M7A7V2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02466</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70320.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672060.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02466"/>
    <dbReference type="EnsemblBacteria" id="CTQ70320">
        <property type="protein sequence ID" value="CTQ70320"/>
        <property type="gene ID" value="LAX5112_02466"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809285" evidence="1">
        <location>
            <begin position="22"/>
            <end position="226"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70320.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="226" mass="24910" checksum="1AB74C557105AB4A" modified="2015-12-09" version="1">MKLHTLGACIAFLLWVGHAPAKTVTVETIEVSPAQGEDSPAASPETIPMGDLPGTLESADEVIVDVPDVLQDRPQILYNKSYLPKPVARMHSQMMEAALSGDINRMRIILESNEVMPTLSFGEIEDPIDFLKESSGDGEGFEILAILADVLDAGFVHVDAGTPQEMYVWPYFSRYPIQDLTPEQKVELFRIVTSGDFAEMEQYGAWNFYRVGIGPDGTLHYFVAGD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A920</accession>
    <name>A0A0M7A920_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">tRNA (guanine-N(7)-)-methyltransferase</fullName>
            <ecNumber evidence="1">2.1.1.33</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="1">tRNA (guanine(46)-N(7))-methyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="1">tRNA(m7G46)-methyltransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="1 2" type="primary">trmB</name>
        <name evidence="2" type="ORF">LAX5112_02798</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>guanosine(46) in tRNA + S-adenosyl-L-methionine = N(7)-methylguanosine(46) in tRNA + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:42708"/>
            <dbReference type="Rhea" id="RHEA-COMP:10188"/>
            <dbReference type="Rhea" id="RHEA-COMP:10189"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:74269"/>
            <dbReference type="ChEBI" id="CHEBI:74480"/>
            <dbReference type="EC" id="2.1.1.33"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1">tRNA modification; N(7)-methylguanine-tRNA biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the class I-like SAM-binding methyltransferase superfamily. TrmB family.</text>
    </comment>
    <comment type="caution">
        <text evidence="1">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.33" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71369.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02798"/>
    <dbReference type="EnsemblBacteria" id="CTQ71369">
        <property type="protein sequence ID" value="CTQ71369"/>
        <property type="gene ID" value="LAX5112_02798"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00989"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008176">
        <property type="term" value="F:tRNA (guanine-N7-)-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01057">
        <property type="entry name" value="tRNA_methyltr_TrmB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003358">
        <property type="entry name" value="tRNA_(Gua-N-7)_MeTrfase_Trmb"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23417">
        <property type="entry name" value="PTHR23417"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02390">
        <property type="entry name" value="Methyltransf_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51625">
        <property type="entry name" value="SAM_MT_TRMB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="1 2" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0819">tRNA processing</keyword>
    <feature type="region of interest" description="Substrate binding" evidence="1">
        <location>
            <begin position="252"/>
            <end position="255"/>
        </location>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="104"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="129"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="156"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="178"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="182"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="214"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01057"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71369.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="273" mass="31399" checksum="702B3D3D59CA5B93" modified="2015-12-09" version="1">MAGLAGKKQTWLTNCVRLQDKPDPERSTHQNNDRRPLRPAIWFEAMNDRYEGSFFGRRKGKPLTPRREALMADVLPALSLDLTAQPPADLKDLFKAEVTSVCLEVGFGGGEHLLHRARTNPETGFIGIEPFVGSMAKAVAAVTDENLQNVRLYDDDAVNVLDWVPEASLDLAYQLYPDPWPKKRHWKRRFINAQNLDRYARALKPGSEFRFASDIDTYIDWTLRHCRDHPAFDWAAETASDWKTPWEGWPGTRYEAKAIREGRIGRYLTFLRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A960</accession>
    <name>A0A0M7A960_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02907</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71685.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ71685">
        <property type="protein sequence ID" value="CTQ71685"/>
        <property type="gene ID" value="LAX5112_02907"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ71685.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="48" mass="5566" checksum="AC83AE41B66625F6" modified="2015-12-09" version="1">MCLFNRLKCANKCRLINLGGKQKNETFEFFDLSVEPKVHAAETRFFGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9N6</accession>
    <name>A0A0M7A9N6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">C4-dicarboxylate-binding periplasmic protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">dctP_6</name>
        <name evidence="4" type="ORF">LAX5112_02726</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the bacterial solute-binding protein 7 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71126.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02726"/>
    <dbReference type="EnsemblBacteria" id="CTQ71126">
        <property type="protein sequence ID" value="CTQ71126"/>
        <property type="gene ID" value="LAX5112_02726"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071702">
        <property type="term" value="P:organic substance transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.190.170">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018389">
        <property type="entry name" value="DctP_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038404">
        <property type="entry name" value="TRAP_DctP_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33376">
        <property type="entry name" value="PTHR33376"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03480">
        <property type="entry name" value="DctP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809220" evidence="3">
        <location>
            <begin position="28"/>
            <end position="342"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ71126.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="342" mass="36533" checksum="4B64136CB2EAC0C6" modified="2015-12-09" version="1">MKHLKHLSILAGLTAGTLTGFTAAASADELVLSSWLPPKHPVVTGVIEPWAEQVADATEGRVTVRVLPKPLGPPPAHYDLAADGVADITYGLHSFTKDDRFLRSRIGQFSFIADTATDGSKAYWNVYGGTLDAQAEHEGTKLLGLWVHGPGMFHNNQRKIESADDFSGLKVRTPGGYIAGLSQDLGITTQFMGPGEVYEKLSRGVIDGVTFPMEALQAFNLTDHIKYSMKIPGGIYNTSWFLVMNEDVWDGISAEDQAAIEKVSGEALAELAGGVWDGADTRGAAYIADKDIEVYDAPAPVLAKIKELAGKHEGAWVEAVSGTGFDGAAALSEFRAQTNVSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAE5</accession>
    <name>A0A0M7AAE5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03060</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72115.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72115">
        <property type="protein sequence ID" value="CTQ72115"/>
        <property type="gene ID" value="LAX5112_03060"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ72115.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="58" mass="6272" checksum="620E9AB095C4ABB0" modified="2015-12-09" version="1">MPFLLSCPDLIRASKPPALRSDNGAGRDRTEWITGSSPVMTCEDIAVLAVQPFVTIQV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAK6</accession>
    <name>A0A0M7AAK6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="10">sn-glycerol-3-phosphate import ATP-binding protein UgpC</fullName>
            <ecNumber evidence="10">3.6.3.20</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">ugpC_2</name>
        <name evidence="10" type="ORF">LAX5112_02563</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.20" evidence="10"/>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70654.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008189340.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02563"/>
    <dbReference type="EnsemblBacteria" id="CTQ70654">
        <property type="protein sequence ID" value="CTQ70654"/>
        <property type="gene ID" value="LAX5112_02563"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015408">
        <property type="term" value="F:ABC-type ferric iron transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd03259">
        <property type="entry name" value="ABC_Carb_Solutes_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015853">
        <property type="entry name" value="ABC_transpr_FbpC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008995">
        <property type="entry name" value="Mo/tungstate-bd_C_term_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013611">
        <property type="entry name" value="Transp-assoc_OB_typ2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08402">
        <property type="entry name" value="TOBE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50331">
        <property type="entry name" value="SSF50331"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 8 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="10" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-0472">Membrane</keyword>
    <keyword evidence="5 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ABC transporter" evidence="9">
        <location>
            <begin position="4"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="42"/>
            <end position="49"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ70654.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="362" mass="39481" checksum="78A2DF142AE45C10" modified="2015-12-09" version="1">MAQITLSNLRHSYHPNPTSDADYALKKIDLTWEDGGAYALLGPSGCGKSTLLNIISGLLVPSEGKILFGDQDVTSLPPAQRNIAQVFQFPVIYDTMTVYDNLAFPLRNRGRDEDIVKQRVTAIAEMLEVTDMLNTRAANLSPDNKQKISMGRGLVRQDVNVVMFDEPLTVIDPHLKWKLRSKLKELHQRVKATMIYVTHDQTEALTFADKVVVMQDGEIVQMGTPVELFERPAHTFVGHFIGSPGMNVLPCNVKGGAAFFGGEQVSLEGPAKDVADGGAEVGIRPEFVSIASNGQGVEAVVRKVADVGRHKVVEAIAHDSRIHAILEGEAPSAGEAVKLQFKQSQTRLYKDGWLASSPEEAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAM6</accession>
    <name>A0A0M7AAM6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Glutamate/gamma-aminobutyrate antiporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">gadC</name>
        <name evidence="6" type="ORF">LAX5112_02852</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71522.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672374.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02852"/>
    <dbReference type="EnsemblBacteria" id="CTQ71522">
        <property type="protein sequence ID" value="CTQ71522"/>
        <property type="gene ID" value="LAX5112_02852"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002293">
        <property type="entry name" value="AA/rel_permease1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13520">
        <property type="entry name" value="AA_permease_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="24"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="51"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="109"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="140"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="169"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="211"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="255"/>
            <end position="279"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="299"/>
            <end position="324"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="354"/>
            <end position="374"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="380"/>
            <end position="402"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="423"/>
            <end position="446"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="458"/>
            <end position="480"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ71522.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="496" mass="52194" checksum="4D58A37AB9DF3599" modified="2015-12-09" version="1">MSDPAQASAERPAKDTSANGKITVLGLAMMTVAAVVSLRGLPLMAVEGTTLLFYIGFAAFIFLIPAALVAAELGGMFAHSTGGIYDWVKAPFGARAGFVAIWLQWIQNVVWYPTVLAFAAASLAYVIGRPELADDGIYTGSVIIAAYWFATLIALTGTSAAARFTSTGFLLGTVVPGLLIIALGAAWIADGQTMAFLDSTSVTGGDAHLRFFPHITGLSSLAFLGGIVLLFAGVEVHAVHANELKNPARDFPKAILLSVVIIVALFLLGSLALASIVPANEIALDQGPMQALQIALKEFGLGWLVPILALLIALGALAGVMSWITGPSRGLLRTARDGELPPFLARTNKNGVQITILLIQGGIVTVLALLYFVLKNVSVAFFLLSAMTITLYLVMYMMMYAAAVRLRLTRPDAERSYKVPGGLGGLIAVAGIGFAGVAFAFITSFFPPSQLPVGSPATYVGVVTAGFVIFIGLPILIHALKRPSWVQNQARTDEQT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="31" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAR3</accession>
    <name>A0A0M7AAR3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 12">D-alanine--D-alanine ligase</fullName>
            <ecNumber evidence="5 12">6.3.2.4</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="12">D-Ala-D-Ala ligase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="12">D-alanylalanine synthetase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="12 16" type="primary">ddl</name>
        <name evidence="16" type="ORF">LAX5112_02618</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="17" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3 12">Cell wall formation.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 12">
            <text>ATP + 2 D-alanine = ADP + D-alanyl-D-alanine + H(+) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:11224"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57416"/>
            <dbReference type="ChEBI" id="CHEBI:57822"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.2.4"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="13">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <cofactor evidence="13">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
        <text evidence="13">Binds 2 magnesium or manganese ions per subunit.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="12">Cell wall biogenesis; peptidoglycan biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="12">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 12">Belongs to the D-alanine--D-alanine ligase family.</text>
    </comment>
    <dbReference type="EC" id="6.3.2.4" evidence="5 12"/>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70813.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672301.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02618"/>
    <dbReference type="EnsemblBacteria" id="CTQ70813">
        <property type="protein sequence ID" value="CTQ70813"/>
        <property type="gene ID" value="LAX5112_02618"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00219"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008716">
        <property type="term" value="F:D-alanine-D-alanine ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008360">
        <property type="term" value="P:regulation of cell shape"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1490.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00047">
        <property type="entry name" value="Dala_Dala_lig"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011761">
        <property type="entry name" value="ATP-grasp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013815">
        <property type="entry name" value="ATP_grasp_subdomain_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000291">
        <property type="entry name" value="D-Ala_lig_Van_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005905">
        <property type="entry name" value="D_ala_D_ala"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011095">
        <property type="entry name" value="Dala_Dala_lig_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011127">
        <property type="entry name" value="Dala_Dala_lig_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016185">
        <property type="entry name" value="PreATP-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07478">
        <property type="entry name" value="Dala_Dala_lig_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01820">
        <property type="entry name" value="Dala_Dala_lig_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF039102">
        <property type="entry name" value="Ddl/VanB"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52440">
        <property type="entry name" value="SSF52440"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01205">
        <property type="entry name" value="D_ala_D_alaTIGR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50975">
        <property type="entry name" value="ATP_GRASP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00843">
        <property type="entry name" value="DALA_DALA_LIGASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00844">
        <property type="entry name" value="DALA_DALA_LIGASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 14" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="9 12" id="KW-0133">Cell shape</keyword>
    <keyword evidence="11 12" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="12" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 12 16" id="KW-0436">Ligase</keyword>
    <keyword evidence="13" id="KW-0460">Magnesium</keyword>
    <keyword evidence="13" id="KW-0464">Manganese</keyword>
    <keyword evidence="13" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7 14" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10 12" id="KW-0573">Peptidoglycan synthesis</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ATP-grasp" evidence="15">
        <location>
            <begin position="102"/>
            <end position="302"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000236"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00003921"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00010871"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012216"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00047"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="PIRSR" id="PIRSR039102-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00409"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS50975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="CTQ70813.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="308" mass="33802" checksum="8D45F07AD13E0F44" modified="2015-12-09" version="1">MTKKHVAVLMGGWVNERPVSLSSGKECAIALEEAGYRVSRVDVDRNVSAVLTELQPDVAFNALHGPFGEDGCVQGILEFLNIPYTHSGVMASSLAMNKVKAKAVMAAAGIPVTEHKVVNRHDISREHPMEPPYVLKPINEGSSFGVLIVKEDQEFPPQELHREDWPYPDVLMCEKFISGRELTCAVKDDQALGVIDIVTQGQEFYDFDAKYAEGGSKHILPAKISPLVYQTAETLAVKAHQALGCRGVSRADFRFDEREDGSGDLICLEVNTQPGMTPTSLVPEMAAYKGMSFKDLVSWMVEDASCCR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAV4</accession>
    <name>A0A0M7AAV4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Dihydroorotate dehydrogenase (quinone)</fullName>
            <ecNumber evidence="11">1.3.5.2</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="11">DHOdehase</fullName>
            <shortName evidence="11">DHOD</shortName>
            <shortName evidence="11">DHODase</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="11">Dihydroorotate oxidase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11 13" type="primary">pyrD</name>
        <name evidence="13" type="ORF">LAX5112_03002</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2 11">Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 11">
            <text>(S)-dihydroorotate + a quinone = a quinol + orotate</text>
            <dbReference type="Rhea" id="RHEA:30187"/>
            <dbReference type="ChEBI" id="CHEBI:24646"/>
            <dbReference type="ChEBI" id="CHEBI:30839"/>
            <dbReference type="ChEBI" id="CHEBI:30864"/>
            <dbReference type="ChEBI" id="CHEBI:132124"/>
            <dbReference type="EC" id="1.3.5.2"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="11">
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </cofactor>
        <text evidence="11">Binds 1 FMN per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="4 11">Pyrimidine metabolism; UMP biosynthesis via de novo pathway; orotate from (S)-dihydroorotate (quinone route): step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="11">Monomer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3 11">Cell membrane</location>
            <topology evidence="3 11">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5 11">Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.</text>
    </comment>
    <dbReference type="EC" id="1.3.5.2" evidence="11"/>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71999.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672499.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03002"/>
    <dbReference type="EnsemblBacteria" id="CTQ71999">
        <property type="protein sequence ID" value="CTQ71999"/>
        <property type="gene ID" value="LAX5112_03002"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00070">
        <property type="reaction ID" value="UER00946"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004152">
        <property type="term" value="F:dihydroorotate dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006207">
        <property type="term" value="P:'de novo' pyrimidine nucleobase biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044205">
        <property type="term" value="P:'de novo' UMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd04738">
        <property type="entry name" value="DHOD_2_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00225">
        <property type="entry name" value="DHO_dh_type2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005720">
        <property type="entry name" value="Dihydroorotate_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005719">
        <property type="entry name" value="Dihydroorotate_DH_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001295">
        <property type="entry name" value="Dihydroorotate_DH_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01180">
        <property type="entry name" value="DHO_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01036">
        <property type="entry name" value="pyrD_sub2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00911">
        <property type="entry name" value="DHODEHASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00912">
        <property type="entry name" value="DHODEHASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 11" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="7 11" id="KW-0288">FMN</keyword>
    <keyword evidence="10 11" id="KW-0472">Membrane</keyword>
    <keyword evidence="9 11 13" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="8 11" id="KW-0665">Pyrimidine biosynthesis</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DHO_dh" evidence="12">
        <location>
            <begin position="46"/>
            <end position="340"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="11">
        <location>
            <begin position="112"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="11">
        <location>
            <begin position="246"/>
            <end position="247"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="11">
        <location>
            <position position="175"/>
        </location>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <begin position="63"/>
            <end position="67"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="67"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="87"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="141"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="172"/>
        </location>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="177"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="217"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="245"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="268"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="297"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <begin position="318"/>
            <end position="319"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001532"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00003125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004202"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00005161"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00005359"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00225"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF01180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="CTQ71999.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="364" mass="38819" checksum="A7BA933BAFC94E11" modified="2015-12-09" version="1">MSGTVFETVVQKGLQLLDAEAAHRVTILGLKSGLVPSRTSPVDARLAVNLWDLTFPNPLGMAAGFDKNGEVPDALLKLGFGYTEAGSVTPRAQPGNPKPRVFRLPNDLGVINRYGFNNDGHGALRDRLKARDGASGIVGINVGANKDSEDRNADYVAGIHEFAEFASYFTVNISSPNTPGLRDLQARSALADLLTRVMAARDEATAKTGRQVPVLLKIAPDIVEGDLKDIVEEVLDKKVDGLIVSNTTISREGLSGEGPFRETGGLSGRPLFQRSTIMLAKARKMAGPDLPIIGVGGIDSAETAWEKIQAGADLLQLYSALVFKGPSLIDEILKGLAAKLDEKGLRSLRAARDASVDDWASREP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AB85</accession>
    <name>A0A0M7AB85_9HYPH</name>
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        <submittedName>
            <fullName evidence="1">Glucose 1-dehydrogenase</fullName>
            <ecNumber evidence="1">1.1.1.47</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">gdh</name>
        <name evidence="1" type="ORF">LAX5112_03160</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.1.1.47" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72378.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
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    <dbReference type="EnsemblBacteria" id="CTQ72378">
        <property type="protein sequence ID" value="CTQ72378"/>
        <property type="gene ID" value="LAX5112_03160"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047936">
        <property type="term" value="F:glucose 1-dehydrogenase [NAD(P)] activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ72378.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="263" mass="27622" checksum="A670414CE73119F7" modified="2015-12-09" version="1">MSLENKVAIVTGAARGIGFAVAKRFVMDGAKVVIADVDDEAGEAAVEDLSGLGTVMYIHCNVAERLDVRNMVAETLNAYGDIDVLVNNAGIVVGAEFLDLEEDDFDKVLSINLKGAFLCSQAVARHMVEKVDNGGDPGCIINMSSINSVVAIPNQIPYCVSKGGMTQLTKTTALSLAKYGIRVNAIGPGSIMTEMLASVNSDPAAKNRIMSRTPMLRIGEPSEIAGVAAFLASEDAGYVTGQTIFADGGRMPLNYTVAVPDDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABK2</accession>
    <name>A0A0M7ABK2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">SGNH_hydro domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03116</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72259.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03116"/>
    <dbReference type="EnsemblBacteria" id="CTQ72259">
        <property type="protein sequence ID" value="CTQ72259"/>
        <property type="gene ID" value="LAX5112_03116"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016788">
        <property type="term" value="F:hydrolase activity, acting on ester bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013830">
        <property type="entry name" value="SGNH_hydro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036514">
        <property type="entry name" value="SGNH_hydro_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13472">
        <property type="entry name" value="Lipase_GDSL_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809218" description="SGNH_hydro domain-containing protein" evidence="1">
        <location>
            <begin position="21"/>
            <end position="382"/>
        </location>
    </feature>
    <feature type="domain" description="SGNH_hydro" evidence="2">
        <location>
            <begin position="116"/>
            <end position="283"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13472"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ72259.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="382" mass="42116" checksum="1B9BE7B571CECDCA" modified="2015-12-09" version="1">MALPSALPLAIALALLVSPAEPTGWFQKEAMAEEPIVLAQNNGFRGFNPFAPIQRLFGGGREKKRQAPVQQAPKVVRPAGLPPRFEEVEKDLDAGLILVVGDRMARGVADGLRFTLAQQPKIKVEEITEDREGFAGAEPPDWATRTLSRIRGADVKAVVVMMGWRDRDEEFPGEPSIEYMTAEWLETYRNKVMALVRSVRQEKLPIVWVGLPPTNDELLNGDFTQLNSIFAGAAEERRVRYVDLWDIFLSEDGAYTSFGPDVDGKNTRLRTNDRIAFTWAGYRKVAFFVERELSRLLGGYGGLAFEGVEDDPNFIVLTGRTTSPEGFLLGGEDDAENDTSSTAYRFFVEGEPLAPVSGRVDDPRMIGNDSVSTLIEAGGGDT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACE9</accession>
    <name>A0A0M7ACE9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03044</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72086.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672526.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03044"/>
    <dbReference type="EnsemblBacteria" id="CTQ72086">
        <property type="protein sequence ID" value="CTQ72086"/>
        <property type="gene ID" value="LAX5112_03044"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011250">
        <property type="entry name" value="OMP/PagP_b-brl"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56925">
        <property type="entry name" value="SSF56925"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809261" evidence="1">
        <location>
            <begin position="25"/>
            <end position="287"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72086.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="287" mass="30892" checksum="E26B3D3A162DF1CA" modified="2015-12-09" version="1">MTSFKNCPTSMVLLLAGLCNPVFAADLAVKQTPVFEPIEGASAWTFDVGGYAFIPLSVEGTSTVDGGAVDLDLGPNEVFDLFQFAVSGRAEAWRKRGVNNGSAFGFVLDGQYVNLGLSNQKIGPASGGTVKADIRQGVVDALIGYRFASLSTGAAAEQRIEFDVTAGARYNYLRQKIQVIPGLPAPFTANLGEDKHWVSPVIGARANFIFNDRWNLVLRGDMSGFGVSGETLSWSLNGIAGYRFTDKATLRIGYRIYDIDYSSGTGSNKFAYDVTQHGPYAGLSYRF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACR1</accession>
    <name>A0A0M7ACR1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative enzyme related to lactoylglutathione lyase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03175</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72421.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672622.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03175"/>
    <dbReference type="EnsemblBacteria" id="CTQ72421">
        <property type="protein sequence ID" value="CTQ72421"/>
        <property type="gene ID" value="LAX5112_03175"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029068">
        <property type="entry name" value="Glyas_Bleomycin-R_OHBP_Dase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041581">
        <property type="entry name" value="Glyoxalase_6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037523">
        <property type="entry name" value="VOC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18029">
        <property type="entry name" value="Glyoxalase_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54593">
        <property type="entry name" value="SSF54593"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51819">
        <property type="entry name" value="VOC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="VOC" evidence="1">
        <location>
            <begin position="2"/>
            <end position="121"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51819"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72421.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="126" mass="13740" checksum="06326B8C1B8F3163" modified="2015-12-09" version="1">MQRAFTNILTEQVAVTAAFYQKLLGYTAKFSSAWFVNLEAPDRTGLELGILLTSHEIVPEAARHQPAGIILTFVVDDCDAVHDRASELGANIIEAPRDMPYGQRRMILRDPAGTIIDVSSLIQAGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AD16</accession>
    <name>A0A0M7AD16_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Putative integral membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03134</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72306.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03134"/>
    <dbReference type="EnsemblBacteria" id="CTQ72306">
        <property type="protein sequence ID" value="CTQ72306"/>
        <property type="gene ID" value="LAX5112_03134"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009380">
        <property type="entry name" value="DUF1036"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06282">
        <property type="entry name" value="DUF1036"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ72306.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="162" mass="18502" checksum="E270A27DE281AF67" modified="2015-12-09" version="1">MLEVGERHRGWSQTWMRTSIQTFCALSLAFFLNTIFSENAHADLRLCNKTDSQVGVAIGYKDKSDWITEGWWNLASNSCETLVPGALVSRYYYIYAVDYDQFGEWGGRAFMCTREKEFTIRGIEDCVARGFERTGFFEIDTGEQSSWTVQLTEPVQQGTGGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADX8</accession>
    <name>A0A0M7ADX8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03514</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73355.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672887.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ73355">
        <property type="protein sequence ID" value="CTQ73355"/>
        <property type="gene ID" value="LAX5112_03514"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809601" evidence="1">
        <location>
            <begin position="20"/>
            <end position="144"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73355.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="144" mass="15538" checksum="11F6223127C9C747" modified="2015-12-09" version="1">MLRALAVLLLGLFTSPALAWEFRASRVCELLYNDETASVQVVFDPAVPEYRIAITPNRPWTPGPVFSMRFDGPLSNTIATDRHVITPDGGTLTVTDRGFGNVLDGLEFNITVTALMGDQAVQIPLDGAAPEVREFRACASGMGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AE11</accession>
    <name>A0A0M7AE11_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03189</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72460.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008196106.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72460">
        <property type="protein sequence ID" value="CTQ72460"/>
        <property type="gene ID" value="LAX5112_03189"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="59"/>
            <end position="80"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72460.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="81" mass="9271" checksum="D0B403A8CF3E24D6" modified="2015-12-09" version="1">MIVFTYAVIAISFVVLGIGGIMYLDHRFSLTVGDRPFAIKGRRIETDDPFVRKQFRKFYAIRVAYSLFLLVLLFVVVSHVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEG4</accession>
    <name>A0A0M7AEG4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative transmembrane protein (Alph_Pro_TM)</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03015</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72034.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672506.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03015"/>
    <dbReference type="EnsemblBacteria" id="CTQ72034">
        <property type="protein sequence ID" value="CTQ72034"/>
        <property type="gene ID" value="LAX5112_03015"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019088">
        <property type="entry name" value="CHP02186-rel_TM"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09608">
        <property type="entry name" value="Alph_Pro_TM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02186">
        <property type="entry name" value="alph_Pro_TM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="235"/>
            <end position="256"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72034.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="259" mass="28777" checksum="7FCB6E04337B7AD1" modified="2015-12-09" version="1">MIRSAAIAAMTLFFGTLEATSKSDESLVTELSSQTVSIQSNFTGTEIVIFGQAQEIQYRPDTDLDYDLVIVVEGPPQDITTRRKGRLLGVWVNREAETFSNVPSFYAVASTADISEIAGRGLLDEHAIGLNHINLAVSGESNVSLSDRDDFRRAFVRLRQDMGLYSERETSITFLTQTMFRTNIPLPANIPVGDYVVKSFLFHEGDLIANTNDHLRVAKTGFEQITFELAREHSFVYGVLAVILAIFTGWLAGVIFRKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AF05</accession>
    <name>A0A0M7AF05_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03297</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72780.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72780">
        <property type="protein sequence ID" value="CTQ72780"/>
        <property type="gene ID" value="LAX5112_03297"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010921">
        <property type="entry name" value="Trp_repressor/repl_initiator"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48295">
        <property type="entry name" value="SSF48295"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="45"/>
            <end position="72"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72780.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="79" mass="8812" checksum="D3A890D67F88F02A" modified="2015-12-09" version="1">MADLNAEDSIAELCRQEGIAQGEYYSWSKKFMEAGRKRLAGDTASEAATGEVQNLLREARDLKEVVAEQALELRLLKKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFP7</accession>
    <name>A0A0M7AFP7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03410</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ73030.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672809.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ73030">
        <property type="protein sequence ID" value="CTQ73030"/>
        <property type="gene ID" value="LAX5112_03410"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="8"/>
            <end position="149"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73030.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="149" mass="16071" checksum="CE828D467A9E4673" modified="2015-12-09" version="1">MTITNKDPAIRRANLQDMNALKQCIDRAYAPVKTRLSDLPDVSAGLESEITDNVVYVAETDEKLIGCAILAIDGELAQLVNIAVDPEYGGRGAGRRLIEVIETHARDMGAIEIQLATHIGMPENVALYAHLGWSETGRSGSKVGMSKPI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFR5</accession>
    <name>A0A0M7AFR5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Biopolymer transport protein ExbD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">exbD</name>
        <name evidence="8" type="ORF">LAX5112_03194</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cell membrane</location>
            <topology evidence="6">Single-pass type II membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the ExbD/TolR family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72474.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451020.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03194"/>
    <dbReference type="EnsemblBacteria" id="CTQ72474">
        <property type="protein sequence ID" value="CTQ72474"/>
        <property type="gene ID" value="LAX5112_03194"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015031">
        <property type="term" value="P:protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003400">
        <property type="entry name" value="ExbD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30558">
        <property type="entry name" value="PTHR30558"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02472">
        <property type="entry name" value="ExbD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0653">Protein transport</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="36"/>
            <end position="57"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005811"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003879"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ72474.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="150" mass="16270" checksum="C78C6634B355B1D3" modified="2015-12-09" version="1">MGMQAGGGQAGGGRRGRRRRRSLPISEINVTPFVDVMLVLLIIFMVAAPLLTVGVPIDLPETRAKALEGDTEPITISINSAGEIFIQDTPILIDEVVPKLEAIAANGYEERIYVRGDQDADYGTMMKLMGRINAAGFKRLGLVTLEERDS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AG72</accession>
    <name>A0A0M7AG72_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03754</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74088.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673077.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74088">
        <property type="protein sequence ID" value="CTQ74088"/>
        <property type="gene ID" value="LAX5112_03754"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ74088.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="235" mass="26127" checksum="05DF6F1AC302534E" modified="2015-12-09" version="1">MTPGETVLLCARNNALWCDAVLRTAGAKTSFHHGFWRASNKQVPLFPSIVTLAAEHSSDLSAALSALPSKAAVKDSFDCLDLRTSGFEKLLTGTWLFRSQEGARKPSSPPDWQKAQTSEALSKWLAAWNRSESLHTLFPPKLLEFPDIDFVSIRRDDAIQGGAVLNYGPSHAGKDFVGISNIFHRKSWLYGALHALIEPFSHRPICTYETDTELLPVYRQIGFQDVGTLTVWQKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGA0</accession>
    <name>A0A0M7AGA0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">EF hand</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03765</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74118.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673086.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74118">
        <property type="protein sequence ID" value="CTQ74118"/>
        <property type="gene ID" value="LAX5112_03765"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011992">
        <property type="entry name" value="EF-hand-dom_pair"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018247">
        <property type="entry name" value="EF_Hand_1_Ca_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002048">
        <property type="entry name" value="EF_hand_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13202">
        <property type="entry name" value="EF-hand_5"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47473">
        <property type="entry name" value="SSF47473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00018">
        <property type="entry name" value="EF_HAND_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50222">
        <property type="entry name" value="EF_HAND_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809323" evidence="1">
        <location>
            <begin position="23"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="2">
        <location>
            <begin position="27"/>
            <end position="53"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50222"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ74118.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="76" mass="7921" checksum="2E1A7EF246CA2FDC" modified="2015-12-09" version="1">MSKSLAAAVLFGAVTASSAVFAQGMSFDVVDSDRDGFVSFDEVTAVMPDITEDAFKAADANQDNLLDPAEFSAVQP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGB8</accession>
    <name>A0A0M7AGB8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Ribosomal RNA small subunit methyltransferase G</fullName>
            <ecNumber evidence="2">2.1.1.170</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="2">16S rRNA 7-methylguanosine methyltransferase</fullName>
            <shortName evidence="2">16S rRNA m7G methyltransferase</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="2 3" type="primary">rsmG</name>
        <name evidence="3" type="ORF">LAX5112_03772</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>guanosine(527) in 16S rRNA + S-adenosyl-L-methionine = N(7)-methylguanosine(527) in 16S rRNA + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:42732"/>
            <dbReference type="Rhea" id="RHEA-COMP:10209"/>
            <dbReference type="Rhea" id="RHEA-COMP:10210"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:74269"/>
            <dbReference type="ChEBI" id="CHEBI:74480"/>
            <dbReference type="EC" id="2.1.1.170"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.170" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74138.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03772"/>
    <dbReference type="EnsemblBacteria" id="CTQ74138">
        <property type="protein sequence ID" value="CTQ74138"/>
        <property type="gene ID" value="LAX5112_03772"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070043">
        <property type="term" value="F:rRNA (guanine-N7-)-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00074">
        <property type="entry name" value="16SrRNA_methyltr_G"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003682">
        <property type="entry name" value="rRNA_ssu_MeTfrase_G"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31760">
        <property type="entry name" value="PTHR31760"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02527">
        <property type="entry name" value="GidB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF003078">
        <property type="entry name" value="GidB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00138">
        <property type="entry name" value="rsmG_gidB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2 3" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0698">rRNA processing</keyword>
    <keyword evidence="2" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="2 3" id="KW-0808">Transferase</keyword>
    <feature type="region of interest" description="S-adenosyl-L-methionine binding" evidence="2">
        <location>
            <begin position="131"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="78"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="83"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="149"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00074"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ74138.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="218" mass="24029" checksum="0DC94244FF114A52" modified="2015-12-09" version="1">MGRPVVLNGSGEAVYKFGDVSRETLDRLQIYVDLVLKWQPAQNLIAPSTIPDIWTRHVADSLQTQWSYPEAKVWVDIGSGGGFPGVVTAILLADEPDTHVHMIESNQRKAAFLRTALRETGSKGTVHAGRIESVAEGWSHGPVDAVSARALASLNLLFDLAEPYTAQGSKAVFHKGQDFRRELDEVSDSWQFDLVEKESVVDPLSRMLLFSNISARSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHC3</accession>
    <name>A0A0M7AHC3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Stalked cell differentiation-controlling protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">pleD_4</name>
        <name evidence="9" type="ORF">LAX5112_03408</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ73024.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03408"/>
    <dbReference type="EnsemblBacteria" id="CTQ73024">
        <property type="protein sequence ID" value="CTQ73024"/>
        <property type="gene ID" value="LAX5112_03408"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01949">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000160">
        <property type="entry name" value="GGDEF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007895">
        <property type="entry name" value="MASE1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00990">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05231">
        <property type="entry name" value="MASE1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00267">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00254">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50887">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="28"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="55"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="82"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="106"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="138"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="domain" description="GGDEF" evidence="8">
        <location>
            <begin position="229"/>
            <end position="360"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="6">
        <location>
            <begin position="160"/>
            <end position="201"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ73024.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="375" mass="41319" checksum="72E37E0046895A9D" modified="2015-12-09" version="1">MSAFVGVSGLLAAGLIDAQNYGNTFATWFTGDAISVVAITPFVLAVYLSDKTERVLPGFETVANFLLMLSAIYIAFWSDVDGLMQSFELAVLPVLLMWASLRLSRIYISFALLFLIGGIIGPTALGQGPLQGIDRNTTLINTQLLLGVIGVLVLTLHATREQVRQQVRHLEHVKDTLDQKVRERTAELEEAKRNAEELASTDALTGAPNRRVFLKRGNEELNRAIRSGEDACMIMFDLDHFKEVNDTYGHQIGDRILKDCAAVTTGFVRNYDLFGRIGGEEFAVFLPNTTVSGGQNVAEKLRQAFMERSVSSHELNYTASFGISPVFEKDRALSMVLRRADLAMYRAKADGRNCVVVYELSLEEKNTGEGSPTPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AI82</accession>
    <name>A0A0M7AI82_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6 15 16">Protoporphyrinogen IX oxidase</fullName>
            <shortName evidence="15">PPO</shortName>
            <ecNumber evidence="15 16">1.3.99.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="17" type="ORF">LAX5112_03777</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="18" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="18">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="15 16">Catalyzes the oxidation of protoporphyrinogen IX to protoporphyrin IX.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 15 16">
            <text>3 A + protoporphyrinogen IX = 3 AH2 + protoporphyrin IX</text>
            <dbReference type="Rhea" id="RHEA:62000"/>
            <dbReference type="ChEBI" id="CHEBI:13193"/>
            <dbReference type="ChEBI" id="CHEBI:17499"/>
            <dbReference type="ChEBI" id="CHEBI:57306"/>
            <dbReference type="ChEBI" id="CHEBI:57307"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="15 16">
            <name>heme b</name>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
        </cofactor>
        <text evidence="15 16">Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="4 15 16">Porphyrin-containing compound metabolism; protoporphyrin-IX biosynthesis; protoporphyrin-IX from protoporphyrinogen-IX: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="15">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3 15">Cell membrane</location>
            <topology evidence="3 15">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5 15 16">Belongs to the HemJ family.</text>
    </comment>
    <dbReference type="EC" id="1.3.99.-" evidence="15 16"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74152.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673095.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03777"/>
    <dbReference type="EnsemblBacteria" id="CTQ74152">
        <property type="protein sequence ID" value="CTQ74152"/>
        <property type="gene ID" value="LAX5112_03777"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00251">
        <property type="reaction ID" value="UER00324"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070818">
        <property type="term" value="F:protoporphyrinogen oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006782">
        <property type="term" value="P:protoporphyrinogen IX biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02239">
        <property type="entry name" value="HemJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005265">
        <property type="entry name" value="HemJ-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR40255">
        <property type="entry name" value="PTHR40255"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03653">
        <property type="entry name" value="UPF0093"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004638">
        <property type="entry name" value="UCP004638"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00701">
        <property type="entry name" value="TIGR00701"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 15 16" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8 15 16" id="KW-0349">Heme</keyword>
    <keyword evidence="13 15 16" id="KW-0408">Iron</keyword>
    <keyword evidence="14 15 16" id="KW-0472">Membrane</keyword>
    <keyword evidence="10 15 16" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12 15" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9 15" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="11 15" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="52"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="82"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="121"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="15">
        <location>
            <position position="11"/>
        </location>
        <ligand>
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="15">
        <location>
            <position position="86"/>
        </location>
        <ligand>
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001093"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00005073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00006501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00017504"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="PIRNR" id="PIRNR004638"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="CTQ74152.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="142" mass="16410" checksum="87AD25C2F1B68D02" modified="2015-12-09" version="1">MDLYLWVKSLHVISIIAWMAGLLYLPRLFVYHVDAEVGSVQSETFKVMERRLLKAIMTPAMIASWVFGLWTAYELNAWSDGWFHAKLLLVFIMSGFHGHLSKCVKAFAVDQNSRSTRYFRMINEIPTVIMIIVVILVIVKPF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIM1</accession>
    <name>A0A0M7AIM1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03817</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74266.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74266">
        <property type="protein sequence ID" value="CTQ74266"/>
        <property type="gene ID" value="LAX5112_03817"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809521" evidence="1">
        <location>
            <begin position="28"/>
            <end position="420"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74266.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="420" mass="45001" checksum="065BB46D7CE5BDB7" modified="2015-12-09" version="1">MMVSGLAFKRLAACALFTGLLTGPVLSLSDQYETAPEVAPAQLLDGKEVGPGYAVLPPVRSTGFLHDYELQADQGIEKVLGDGLLKMRLSEIKAFVGLESLKNDASFLDGLKQSAQKPVEFVESTIQDPVGTAKSTVSGVGRVFSRLGKGVESAVTGQGGSAADIAKSITGQAQARRELAVQLGVDPYTLDKALSAKLDETASVTSAGSWTVTAITALIPGGVIVNATRAAEDFRNVIVDSTESELRERTLDTFRKAGISERNIMNIDANPHYTASEKAIIAYQMAAMPSVQGLDLIAEDAAGVKDRGFAYFQLRRIVLLETYHRKISGLGQIRDVTGLLVAMRRDGMAAIVMPYDTVAWTEPAAKTFSRLQEDLNRLPFPPTGVDFLITGTVTEMAAERMTAFGWEITGNYPMPEGPVH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIP2</accession>
    <name>A0A0M7AIP2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 4">N-(5'-phosphoribosyl)anthranilate isomerase</fullName>
            <shortName evidence="4">PRAI</shortName>
            <ecNumber evidence="2 4">5.3.1.24</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4 6" type="primary">trpF</name>
        <name evidence="6" type="ORF">LAX5112_03824</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>N-(5-phospho-beta-D-ribosyl)anthranilate = 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate</text>
            <dbReference type="Rhea" id="RHEA:21540"/>
            <dbReference type="ChEBI" id="CHEBI:18277"/>
            <dbReference type="ChEBI" id="CHEBI:58613"/>
            <dbReference type="EC" id="5.3.1.24"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1 4">Amino-acid biosynthesis; L-tryptophan biosynthesis; L-tryptophan from chorismate: step 3/5.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the TrpF family.</text>
    </comment>
    <dbReference type="EC" id="5.3.1.24" evidence="2 4"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74286.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673128.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03824"/>
    <dbReference type="EnsemblBacteria" id="CTQ74286">
        <property type="protein sequence ID" value="CTQ74286"/>
        <property type="gene ID" value="LAX5112_03824"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00035">
        <property type="reaction ID" value="UER00042"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004640">
        <property type="term" value="F:phosphoribosylanthranilate isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000162">
        <property type="term" value="P:tryptophan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00405">
        <property type="entry name" value="PRAI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00135">
        <property type="entry name" value="PRAI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001240">
        <property type="entry name" value="PRAI_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011060">
        <property type="entry name" value="RibuloseP-bd_barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044643">
        <property type="entry name" value="TrpF_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42894">
        <property type="entry name" value="PTHR42894"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00697">
        <property type="entry name" value="PRAI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51366">
        <property type="entry name" value="SSF51366"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="4" id="KW-0057">Aromatic amino acid biosynthesis</keyword>
    <keyword evidence="4 6" id="KW-0413">Isomerase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0822">Tryptophan biosynthesis</keyword>
    <feature type="domain" description="PRAI" evidence="5">
        <location>
            <begin position="6"/>
            <end position="208"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012572"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022272"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00135"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00697"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ74286.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="221" mass="23743" checksum="1ACBFB203D850AFB" modified="2015-12-09" version="1">MSDIKVKICGLSTEDTMQAALDAGADMVGLVFFPKSPRHVNLSDACKLADMARGKADIVALTVNMDLDGLSRINELVGPDYFQFHGSEAPESLAAAKVMHGKKIMKAISVSDKSDLEQALYYSIVADRILFDAKPPAGSDIPGGNGVSFDWTLLKDLDLKKPFMLSGGLNMDNVAEAIRLSGAKEIDLSSGVERERGVKDPALIRSFLAKVKNTQAEAVKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJY2</accession>
    <name>A0A0M7AJY2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">HTH tetR-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_04140</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75189.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673396.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04140"/>
    <dbReference type="EnsemblBacteria" id="CTQ75189">
        <property type="protein sequence ID" value="CTQ75189"/>
        <property type="gene ID" value="LAX5112_04140"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50977">
        <property type="entry name" value="HTH_TETR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH tetR-type" evidence="3">
        <location>
            <begin position="4"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="1">
        <location>
            <begin position="27"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="204"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="210"/>
            <end position="225"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ75189.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="234" mass="26121" checksum="47E14F0DE75724C7" modified="2015-12-09" version="1">MATAKTKQKILTVFLELLEKHPYEEVSLQLIAETAKVKLSDLRRAYTSKLALVEAFAESIDAAVLDERDEGMDDQPARDRLFDILMTRIDALADHKEAVRALKTAADEDPGLALEFNRIAIRSQKWMLVAAGIDLSGAKGTVVAQGLVMAFAKVVATWLDEPDEGMPRTMSRLDKELDNGVSFMKRLNRLEGMAKGLRKFIKSASRRGRSRNRARDEDDFTDHTETPMPSEQGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKR4</accession>
    <name>A0A0M7AKR4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03842</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74373.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673158.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03842"/>
    <dbReference type="EnsemblBacteria" id="CTQ74373">
        <property type="protein sequence ID" value="CTQ74373"/>
        <property type="gene ID" value="LAX5112_03842"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="21"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="62"/>
            <end position="87"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74373.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="124" mass="13137" checksum="4CF8EDA4AC501E19" modified="2015-12-09" version="1">MTVKVDAIAKRFLPKDPFFRLLVVNSLAGVGISGLMVGGIFYSNIGNLTVLIRGDDSPLVPILMLVAGLVITLVSVVVGSAIMLLGADQTKGGPGSKLPSLFEPRLEPIPVKADTVRAHRFDVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKR8</accession>
    <name>A0A0M7AKR8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Divergent AAA domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03982</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74810.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673276.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03982"/>
    <dbReference type="EnsemblBacteria" id="CTQ74810">
        <property type="protein sequence ID" value="CTQ74810"/>
        <property type="gene ID" value="LAX5112_03982"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.950.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007421">
        <property type="entry name" value="Schlafen_AlbA_2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038461">
        <property type="entry name" value="Schlafen_AlbA_2_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04326">
        <property type="entry name" value="AlbA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="68"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="domain" description="AlbA_2" evidence="2">
        <location>
            <begin position="115"/>
            <end position="250"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF04326"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ74810.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="264" mass="29463" checksum="3AD8AA37C8B104C2" modified="2015-12-09" version="1">MSFLSSRLPIIPAYVLVGAIVGVLVIHPLNLVVVWWELARFSETAPRLIEFLNARLWFALLPRHWDVAVAYTLVGAIVGLAFGVFTRNYLRASEAYKSLREEQIALVPQLIAQGETDRVEFKSSLRWDVQENRINRGLEKVIAKTIAGFFNAKGGHLIVGVDDDGKPLGLAKDLATLRSPDHDAFERTVNDIVSKNLGGDLCPYIHTVFSMVGGEDVAMIIIRPAPRAVYLEEGKLSIFYVRSGNSTRQLDVREALNYANTRWS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKZ8</accession>
    <name>A0A0M7AKZ8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Glutathionyl-hydroquinone reductase YqjG</fullName>
            <ecNumber evidence="3">1.8.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yqjG</name>
        <name evidence="3" type="ORF">LAX5112_04190</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.8.-.-" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75337.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673431.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04190"/>
    <dbReference type="EnsemblBacteria" id="CTQ75337">
        <property type="protein sequence ID" value="CTQ75337"/>
        <property type="gene ID" value="LAX5112_04190"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004364">
        <property type="term" value="F:glutathione transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006749">
        <property type="term" value="P:glutathione metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010987">
        <property type="entry name" value="Glutathione-S-Trfase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036282">
        <property type="entry name" value="Glutathione-S-Trfase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040079">
        <property type="entry name" value="Glutathione_S-Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004045">
        <property type="entry name" value="Glutathione_S-Trfase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016639">
        <property type="entry name" value="GST_Omega/GSH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32419">
        <property type="entry name" value="PTHR32419"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13409">
        <property type="entry name" value="GST_N_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF015753">
        <property type="entry name" value="GST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00019">
        <property type="entry name" value="Glutathione_Transferase_(cytos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDG01206">
        <property type="entry name" value="Xi.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47616">
        <property type="entry name" value="SSF47616"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50405">
        <property type="entry name" value="GST_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GST C-terminal" evidence="2">
        <location>
            <begin position="166"/>
            <end position="293"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="1">
        <location>
            <position position="63"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor/acceptor" evidence="1">
        <location>
            <position position="189"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRSR" id="PIRSR015753-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50405"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ75337.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="324" mass="37183" checksum="F3372F26063FD58E" modified="2015-12-09" version="1">MGTLVDGVWHDQWYDTKSTGGRFVRKDAAFRNFITKDGRPGPTGDGGFKAEAGRYHLFVSYACPWAHRTLIFRTLKGLNEYISVSAVQPLMLENGWEFGETEPLTGANYAWQVYVKADPTYSGRATVPILWDKHQQTIVSNESAEIIRMFNTEFDHLTGSTTDYYPQDLRPEIDEVNERIYHTVNNGVYKSGFATTQEAYEEAVTALFETLDDLESRLSKQRYLAGDVLTEADWRLFTTLVRFDPVYVAHFKCNIRRIADYPNLFNYLRELYQYPGVAETVDMATIKQHYFGSHETINPHRIVPVGPDLDFMAPHDRDRFKAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AL05</accession>
    <name>A0A0M7AL05_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Putative dienelactone hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_04370</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75815.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04370"/>
    <dbReference type="EnsemblBacteria" id="CTQ75815">
        <property type="protein sequence ID" value="CTQ75815"/>
        <property type="gene ID" value="LAX5112_04370"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003847">
        <property type="term" value="F:1-alkyl-2-acetylglycerophosphocholine esterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016042">
        <property type="term" value="P:lipid catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005065">
        <property type="entry name" value="PAF_acetylhydro-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10272">
        <property type="entry name" value="PTHR10272"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03403">
        <property type="entry name" value="PAF-AH_p_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0442">Lipid degradation</keyword>
    <keyword evidence="3" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022963"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ75815.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="439" mass="48169" checksum="8589122E350B69E2" modified="2015-12-09" version="1">MPRFSPKSLLVAATLTSLVSAEAMSENRIDLVRPDAPELAAHGEHGVGRMTLQLTNPNQYDIVRIAADETPERYDRPLTVEIFYPAEAHVAPEPMRVILRDGQREADIHGLSKPDATPAKASAPYPLVLISHGYPGNRFLMSHLAENLATKGYVAVSIDHTDSMYHDKAAFGSTLVNRPLDQMFVLNEMDRLSKDDNSPLAGLIDTSRTGLIGYSMGGYGAIISAGGGVTDKSIGYEWGAPDGLLGMHKAGSADHETLIDPRLKAIVAIGPWGRNRDFWDAEGLSGVRVPALYVAGSVDDVSQYETGIRKIWEESSGTDRHLLTFISANHNAAAPMPAPMESYPFSDELGWAPFEHYADAVWDTVRMNNITQHFATAFMDLHLKNDTDKAAYLNLIETAEDGVFARNDDGKVKPEHTYWRGFPDRSAKGLMFETRSKGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AL38</accession>
    <name>A0A0M7AL38_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Probable cytosol aminopeptidase</fullName>
            <ecNumber evidence="8">3.4.11.1</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">Leucine aminopeptidase</fullName>
            <shortName evidence="8">LAP</shortName>
            <ecNumber evidence="8">3.4.11.10</ecNumber>
        </alternativeName>
        <alternativeName>
            <fullName evidence="8">Leucyl aminopeptidase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="10" type="primary">pepA_2</name>
        <name evidence="8" type="synonym">pepA</name>
        <name evidence="10" type="ORF">LAX5112_03880</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 8">
            <text>Release of an N-terminal amino acid, Xaa-|-Yaa-, in which Xaa is preferably Leu, but may be other amino acids including Pro although not Arg or Lys, and Yaa may be Pro. Amino acid amides and methyl esters are also readily hydrolyzed, but rates on arylamides are exceedingly low.</text>
            <dbReference type="EC" id="3.4.11.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2 8">
            <text>Release of an N-terminal amino acid, preferentially leucine, but not glutamic or aspartic acids.</text>
            <dbReference type="EC" id="3.4.11.10"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="8">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
        <text evidence="8">Binds 2 manganese ions per subunit.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 8">Belongs to the peptidase M17 family.</text>
    </comment>
    <dbReference type="EC" id="3.4.11.1" evidence="8"/>
    <dbReference type="EC" id="3.4.11.10" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74493.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673234.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03880"/>
    <dbReference type="EnsemblBacteria" id="CTQ74493">
        <property type="protein sequence ID" value="CTQ74493"/>
        <property type="gene ID" value="LAX5112_03880"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030145">
        <property type="term" value="F:manganese ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070006">
        <property type="term" value="F:metalloaminopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00433">
        <property type="entry name" value="Peptidase_M17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.220.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00181">
        <property type="entry name" value="Cytosol_peptidase_M17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011356">
        <property type="entry name" value="Leucine_aapep/pepB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043472">
        <property type="entry name" value="Macro_dom-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000819">
        <property type="entry name" value="Peptidase_M17_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023042">
        <property type="entry name" value="Peptidase_M17_leu_NH2_pept"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008283">
        <property type="entry name" value="Peptidase_M17_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11963">
        <property type="entry name" value="PTHR11963"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00883">
        <property type="entry name" value="Peptidase_M17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02789">
        <property type="entry name" value="Peptidase_M17_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00481">
        <property type="entry name" value="LAMNOPPTDASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52949">
        <property type="entry name" value="SSF52949"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00631">
        <property type="entry name" value="CYTOSOL_AP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 8 10" id="KW-0031">Aminopeptidase</keyword>
    <keyword evidence="8" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 8 10" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7 8" id="KW-0464">Manganese</keyword>
    <keyword evidence="8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5 8" id="KW-0645">Protease</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CYTOSOL_AP" evidence="9">
        <location>
            <begin position="345"/>
            <end position="352"/>
        </location>
    </feature>
    <feature type="active site" evidence="8">
        <location>
            <position position="277"/>
        </location>
    </feature>
    <feature type="active site" evidence="8">
        <location>
            <position position="351"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="265"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="270"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="288"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="347"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="349"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000135"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00000967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009528"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00181"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS00631"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ74493.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="499" mass="51876" checksum="E0F852DBC1337884" modified="2015-12-09" version="1">MTKLNKISFSKIDAPSKGIVVALAGEALATGAATAGLVGDLTGGLANVADIGGFSGKKKTSLDLVAPGGLSLDRLIVFGTGAMDGLTRDDWRAFGGAVFASLKSTKAETATVVLEAPEGEELDAELAAEFAMGAKLRAYEFDKYKSKKDDDKAKKTLKLTLQVADPKAARKAWTTAEGIADGVILARDLVNEPANVLGPVEFAAKAAELEALGVEVEILGEKEMKKLKMAALLGVAQGSVKPPRLAVMRWNGGKKGAAPVALVGKGVVFDTGGISIKPAGGMEDMKGDMGGAAAVTGAMHAIAARKAKANVVGVIGLVENMPDGNAQRPGDIVTAMSGTTIEILNTDAEGRLVLADAMWYTQEKYKPAIMIDLATLTGAVLVALGNLNAGLFSNNDELAGKLLEAAKASGEPLWRLPLSKDYDKIIDTPNADVKNTGGRWAGSITAAQFLQRFSNDVPWAHLDIAGTAFGAPKDDICQGWASGYGVRLLNQLVADHYES</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AL65</accession>
    <name>A0A0M7AL65_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Methyl-accepting chemotaxis protein 4</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">mcp4_17</name>
        <name evidence="7" type="ORF">LAX5112_04175</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the methyl-accepting chemotaxis (MCP) protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75291.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04175"/>
    <dbReference type="EnsemblBacteria" id="CTQ75291">
        <property type="protein sequence ID" value="CTQ75291"/>
        <property type="gene ID" value="LAX5112_04175"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004089">
        <property type="entry name" value="MCPsignal_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00015">
        <property type="entry name" value="MCPsignal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00283">
        <property type="entry name" value="MA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50111">
        <property type="entry name" value="CHEMOTAXIS_TRANSDUC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0807">Transducer</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="55"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="6">
        <location>
            <begin position="77"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="domain" description="Methyl-accepting transducer" evidence="5">
        <location>
            <begin position="172"/>
            <end position="408"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="198"/>
            <end position="219"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00029447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ75291.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="428" mass="44516" checksum="4AE0AB47FF272F3C" modified="2015-12-09" version="1">MVVTAAVIMMGGTAFAFYTFRQAMIAQLGTADSAQQFLQGNVAENLDGLILDQMITIGLVVSPVGLAFLGLAVVLALGIARPLARLQGALGKLSAGDLEVEIDGVERSDEIGAIARSVTDFRVNLAERAQDQARKDLAHQDALNAERSALMQDVADDFEKSVLGVVSSLLEKSDSVESNSNDLTRAVESSLRAVSEVSTASADANQSVETVTGASHRLSESLSRVREDVDQATDIADAAVTEARKTDEIVGRLSETGRAIGEIVELISQIASQTNLLALNATIEAARAGEAGRGFAVVASEVKALAEQTTKATEDISAQVSAVQDVAQQSGVAIASIADTIERVSAISAKIRDAVEDQTSATGEINGSAQTALLSSERVTGNVGTLNDAMEASRTATDGMHQASAELGTLSNTLQAQVSQFLQSVRAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALN5</accession>
    <name>A0A0M7ALN5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Bcr/CflA family efflux transporter</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">bcr_2</name>
        <name evidence="10" type="ORF">LAX5112_04124</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cell inner membrane</location>
            <topology evidence="7">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the major facilitator superfamily. Bcr/CmlA family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75140.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75140">
        <property type="protein sequence ID" value="CTQ75140"/>
        <property type="gene ID" value="LAX5112_04124"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042910">
        <property type="term" value="F:xenobiotic transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990961">
        <property type="term" value="P:xenobiotic detoxification by transmembrane export across the plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004812">
        <property type="entry name" value="Efflux_drug-R_Bcr/CmlA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00710">
        <property type="entry name" value="efflux_Bcr_CflA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="7" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3 7" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="36"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="78"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="106"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="130"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="164"/>
            <end position="186"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="192"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="245"/>
            <end position="265"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="277"/>
            <end position="297"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="309"/>
            <end position="330"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="336"/>
            <end position="356"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="368"/>
            <end position="389"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="401"/>
            <end position="419"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="9">
        <location>
            <begin position="39"/>
            <end position="423"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006236"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU365088"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ75140.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="433" mass="46044" checksum="3853622A3255D0EF" modified="2015-12-09" version="1">MKENDTSADYGSSAGRPQSSARAAKPEILREPGIPFAEFVTIIALLMALNALAIDVMLPALPAIGEALNIQEENNRQTVLLLYLVGFGGGQLFFGPIADSLGRRKVLIGGLVLYSLASIAAIITNDLTQFLAARVLQGIGCAAARVTALSIVRDCFTGRRMAKVMSLVMMVFMAVPIIAPSVGQAILFVAGWHWIFTMLLAAGVGMLVWTWMRLPETLAPEHRRPMVMSNIAGAYWKALTTRVTLGYTIGLSFIFGGLFAFLAMSQQIFVDVFGLGAYFPVVFAGIAIAMAISSFMNSRLVEAIGMRRLSHTAALIFTGLGALLAAVAALGFESLWLFLILTTLIMTTFGFLGANFNTMAMEPLGDIAGTASSVIGFVSTLGGAILGYVMGQLFDGSTMPLGLAFACYGLSAIACILFAEGGRMFHALERGDQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AM45</accession>
    <name>A0A0M7AM45_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">tRNA (cytidine(34)-2'-O)-methyltransferase</fullName>
            <ecNumber evidence="4">2.1.1.207</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmL</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="4 7" type="primary">trmL</name>
        <name evidence="7" type="ORF">LAX5112_04178</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>5-carboxymethylaminomethyluridine(34) in tRNA(Leu) + S-adenosyl-L-methionine = 5-carboxymethylaminomethyl-2'-O-methyluridine(34) in tRNA(Leu) + H(+) + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:43088"/>
            <dbReference type="Rhea" id="RHEA-COMP:10333"/>
            <dbReference type="Rhea" id="RHEA-COMP:10334"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:74508"/>
            <dbReference type="ChEBI" id="CHEBI:74511"/>
            <dbReference type="EC" id="2.1.1.207"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>cytidine(34) in tRNA + S-adenosyl-L-methionine = 2'-O-methylcytidine(34) in tRNA + H(+) + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:43084"/>
            <dbReference type="Rhea" id="RHEA-COMP:10331"/>
            <dbReference type="Rhea" id="RHEA-COMP:10332"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:74495"/>
            <dbReference type="ChEBI" id="CHEBI:82748"/>
            <dbReference type="EC" id="2.1.1.207"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="4">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.207" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75300.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673422.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04178"/>
    <dbReference type="EnsemblBacteria" id="CTQ75300">
        <property type="protein sequence ID" value="CTQ75300"/>
        <property type="gene ID" value="LAX5112_04178"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008757">
        <property type="term" value="F:S-adenosylmethionine-dependent methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008175">
        <property type="term" value="F:tRNA methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd18094">
        <property type="entry name" value="SpoU-like_TrmL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1280.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01885">
        <property type="entry name" value="tRNA_methyltr_TrmL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029028">
        <property type="entry name" value="Alpha/beta_knot_MTases"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001537">
        <property type="entry name" value="SpoU_MeTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016914">
        <property type="entry name" value="tRNA_cyt/urid_MeTfrase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029026">
        <property type="entry name" value="tRNA_m1G_MTases_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42971">
        <property type="entry name" value="PTHR42971"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00588">
        <property type="entry name" value="SpoU_methylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF029256">
        <property type="entry name" value="SpoU_TrmH_prd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75217">
        <property type="entry name" value="SSF75217"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="1 4 7" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4 5" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="2 4 7" id="KW-0808">Transferase</keyword>
    <keyword evidence="4" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="SpoU_methylase" evidence="6">
        <location>
            <begin position="4"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4 5">
        <location>
            <position position="80"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4 5">
        <location>
            <position position="102"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4 5">
        <location>
            <position position="122"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4 5">
        <location>
            <position position="130"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR029256-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00588"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ75300.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="156" mass="17303" checksum="1AFFB8ED36A995B6" modified="2015-12-09" version="1">MPDIALYQPDIPQNTGTMLRLAACMSVTVHLIEPAGFPLSDSALKRAGMDYLERAALKRHLNFEAFDDWRQTHKRRLVLLTTKTDLAYTDFEFAADDILLLGRESTGAPDAIHQLADARLTIPMAEGMRSLNVAVSCGMVLGEALRQTRAFPKRSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANG3</accession>
    <name>A0A0M7ANG3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Hydrogenase isoenzymes nickel incorporation protein HypB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">hypB</name>
        <name evidence="4" type="ORF">LAX5112_04512</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the SIMIBI class G3E GTPase family. HypB/HupM subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000025">
        <property type="protein sequence ID" value="CTQ76197.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673711.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000025.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04512"/>
    <dbReference type="EnsemblBacteria" id="CTQ76197">
        <property type="protein sequence ID" value="CTQ76197"/>
        <property type="gene ID" value="LAX5112_04512"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016151">
        <property type="term" value="F:nickel cation binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051604">
        <property type="term" value="P:protein maturation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd05390">
        <property type="entry name" value="HypB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003495">
        <property type="entry name" value="CobW/HypB/UreG_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004392">
        <property type="entry name" value="Hyd_mat_HypB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30134">
        <property type="entry name" value="PTHR30134"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02492">
        <property type="entry name" value="cobW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00073">
        <property type="entry name" value="hypB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="cobW" evidence="3">
        <location>
            <begin position="88"/>
            <end position="249"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="14"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="14"/>
            <end position="32"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF02492"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ76197.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="284" mass="30778" checksum="EAACD846E1FC34A1" modified="2015-12-09" version="1">MCTVCGCGSGETRIEDGVKHTHGREHGHEHKAMPNHSHHHHYGTGDAGASVPGMSQSRLIQLEQDILSKNNSYADANRRYFAEHGIFALNLVSSPGSGKTSLLVETLKRLGKTRSCYVIEGDQQTTNDADRIRDTGVPALQINTGKGCHLDGHMIGHAVERLAPKDGAYVFIENVGNLVCPAAFDLGEAHKVAILSVTEGEDKPLKYPDMFAAADVMLLNKTDLLPYVDFDVGIAIENARRINQDIKMLTVSARSGDGLEDWIDWIGTARAKLFAGYAATDAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AP50</accession>
    <name>A0A0M7AP50_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04211</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75394.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673452.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000021.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04211"/>
    <dbReference type="EnsemblBacteria" id="CTQ75394">
        <property type="protein sequence ID" value="CTQ75394"/>
        <property type="gene ID" value="LAX5112_04211"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.150.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001343">
        <property type="entry name" value="Hemolysn_Ca-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011049">
        <property type="entry name" value="Serralysin-like_metalloprot_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00353">
        <property type="entry name" value="HemolysinCabind"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51120">
        <property type="entry name" value="SSF51120"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ75394.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="560" mass="54592" checksum="034D7CB95C059955" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AP56</accession>
    <name>A0A0M7AP56_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Acetate operon repressor</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">iclR_2</name>
        <name evidence="5" type="ORF">LAX5112_04438</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ76020.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673647.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000024.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04438"/>
    <dbReference type="EnsemblBacteria" id="CTQ76020">
        <property type="protein sequence ID" value="CTQ76020"/>
        <property type="gene ID" value="LAX5112_04438"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.450.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029016">
        <property type="entry name" value="GAF-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014757">
        <property type="entry name" value="Tscrpt_reg_IclR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005471">
        <property type="entry name" value="Tscrpt_reg_IclR_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09339">
        <property type="entry name" value="HTH_IclR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01614">
        <property type="entry name" value="IclR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00346">
        <property type="entry name" value="HTH_ICLR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51077">
        <property type="entry name" value="HTH_ICLR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51078">
        <property type="entry name" value="ICLR_ED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH iclR-type" evidence="3">
        <location>
            <begin position="3"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="domain" description="IclR-ED" evidence="4">
        <location>
            <begin position="66"/>
            <end position="253"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51077"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51078"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ76020.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="256" mass="28193" checksum="523007F1CB6A70A2" modified="2015-12-09" version="1">MAVKQIQNALDLIEYFARTKKPASLAELQQHFGWPRSSAYNILNTLVERGYMYEPARRGGYYPTPRLASVAESIMSADPLNEQLAELLRKLADETGETAILAAPAGRFSVYLDVIESHSPIRYAAHVGMRIPIHAGASGRALLSLYSEAERTALLSKVSFDRYGANALMTAEDVEAALEKSRDRGWYQSIREYSADLAAIAIPVMVDDRKFAVVVAGPQYRLEDKCGDVAATLQRLTREFGFASNEITSDPIAASN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APC7</accession>
    <name>A0A0M7APC7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Xylulose kinase</fullName>
            <ecNumber evidence="3">2.7.1.17</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">xylB_1</name>
        <name evidence="3" type="ORF">LAX5112_04619</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.7.1.17" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000027">
        <property type="protein sequence ID" value="CTQ76517.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673806.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000027.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04619"/>
    <dbReference type="EnsemblBacteria" id="CTQ76517">
        <property type="protein sequence ID" value="CTQ76517"/>
        <property type="gene ID" value="LAX5112_04619"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004856">
        <property type="term" value="F:xylulokinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018485">
        <property type="entry name" value="Carb_kinase_FGGY_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018484">
        <property type="entry name" value="Carb_kinase_FGGY_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02782">
        <property type="entry name" value="FGGY_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00370">
        <property type="entry name" value="FGGY_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="SSF53067"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0418">Kinase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="FGGY_N" evidence="1">
        <location>
            <begin position="3"/>
            <end position="232"/>
        </location>
    </feature>
    <feature type="domain" description="FGGY_C" evidence="2">
        <location>
            <begin position="269"/>
            <end position="415"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02782"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ76517.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="418" mass="44639" checksum="A20CA5B58A052B65" modified="2015-12-09" version="1">MLTLGIDIGTSGVRTAVLESEEPVSEARAPHLTQDPDNIDAEKWWKTVRQCLTMQGQALRALGRDLSEISGIAVDGTSGTMVLTNEDLRPVSPALMYNSKGFEAEAALIADHLCGPHITKGANSALARAMRLKKLSPSEPSHLMHQADFIAAKLTGVAGRSDYNNALKTGFDPGLKKWPDWIEHVFDPALLPLVYSPGEQLDAVAPDIAREFGFSSQTMVHAGTTDSIAAFLASAPLKSRVAVTSLGSTIAVKYLSPIRVDAPEIGLYSHRLRDLWLAGGASNSGGAVLKAHFSDDQLQTLSQAIDPAQSTGLDFYPLLDAGERFPVNNPDLAPRLNPRPEDDVAFLQAMLEGMARIEATCYRKIEALGAGYPETVYTAGGGSANSAWTEIRSRALGLEIAVSKHTEASIGAARLVTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AR06</accession>
    <name>A0A0M7AR06_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04959</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000037">
        <property type="protein sequence ID" value="CTQ77575.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77575">
        <property type="protein sequence ID" value="CTQ77575"/>
        <property type="gene ID" value="LAX5112_04959"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ77575.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="135" mass="14601" checksum="86129A8D20235A6D" modified="2015-12-09" version="1">MPGQRGSENRQKSEQVLVRMAPELARRVNAVAEAAGLSSASWIRDLAVKELGVDRKFVAPTPRVAVPPRDLLEISRLTASVARLNGAVVQLQISIREAGTMDLHAEGERVLADLRSIQPGLVDATLMVKNAVRSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARF6</accession>
    <name>A0A0M7ARF6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04492</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000025">
        <property type="protein sequence ID" value="CTQ76164.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673700.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000025.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76164">
        <property type="protein sequence ID" value="CTQ76164"/>
        <property type="gene ID" value="LAX5112_04492"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036374">
        <property type="entry name" value="OxRdtase_Mopterin-bd_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56524">
        <property type="entry name" value="SSF56524"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809558" evidence="1">
        <location>
            <begin position="23"/>
            <end position="168"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76164.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="168" mass="18861" checksum="AE43E91378537B61" modified="2015-12-09" version="1">MKRALLFVSVFLGVPVYSPALADPIPVSLEPITHEEASIEVHASAGTIVSYTPAEIEQLPTYRVTTTTPWRSEPVDFDGVLLSDLLKKHSLNNAAELIVKAENDYSVEFLRKTWEAAPFLIATRVNGKPISRRERGPIQFIVAADDYDRETDISERHLVWMVSSIRLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASE9</accession>
    <name>A0A0M7ASE9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Mu-like prophage FluMu protein gp28</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04908</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000034">
        <property type="protein sequence ID" value="CTQ77431.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674051.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000034.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04908"/>
    <dbReference type="EnsemblBacteria" id="CTQ77431">
        <property type="protein sequence ID" value="CTQ77431"/>
        <property type="gene ID" value="LAX5112_04908"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77431.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="175" mass="18941" checksum="49AEE39226E4E584" modified="2015-12-09" version="1">MTAATANDPILSRDPSSLPPELPLGSDIPENLDPLAAGILMDHQKEWLEDKSDLKLCEKGRRTGITFAEALDDTLKAPSALVVVSNDTLAAKIGKHAAIDTAGFGQVQQMLETGTAIDRRADNKGINFWMDQGGYLRRVVVRQSAEGYLYIGTLFVSSANLLKSHLAKYGEWGGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASH1</accession>
    <name>A0A0M7ASH1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Short chain dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04618</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000027">
        <property type="protein sequence ID" value="CTQ76514.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673805.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000027.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04618"/>
    <dbReference type="EnsemblBacteria" id="CTQ76514">
        <property type="protein sequence ID" value="CTQ76514"/>
        <property type="gene ID" value="LAX5112_04618"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.225.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001303">
        <property type="entry name" value="Aldolase_II/adducin_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036409">
        <property type="entry name" value="Aldolase_II/adducin_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00596">
        <property type="entry name" value="Aldolase_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01007">
        <property type="entry name" value="Aldolase_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53639">
        <property type="entry name" value="SSF53639"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aldolase_II" evidence="1">
        <location>
            <begin position="12"/>
            <end position="198"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM01007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76514.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="325" mass="34875" checksum="44406C6F5F9997FD" modified="2015-12-09" version="1">MNGPLPELLTPAFRALSARLGQDPLQVQGPGGNTSIKSGAVMWIKASGTELANAETANIFVAVDRTAALSEAHEIQGDGSCKSTILDPAIKLRPSIETTFHAALDHAVVAHTHSVATITHAISSEGRMVLADKLADMPFVTVPYAKPGLPLTREILARIQSETKIVVLQNHGLIVCGESVDAVSHLIQDVENRLAMPPLRDKTADAASLAPEGFVWSEESWIALDPHVSDLALTGTYYPDHVVFLGPALPVRDHDGVPPAILIKGQGILIRKDATSSQKAMLRCLSDVLARLPAEWTVDPIGPDAEAELLNWDAEKYRQALAEQR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASN9</accession>
    <name>A0A0M7ASN9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">TRAP-type C4-dicarboxylate transport system, small permease component</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">LAX5112_05005</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000039">
        <property type="protein sequence ID" value="CTQ77667.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674128.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000039.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_05005"/>
    <dbReference type="EnsemblBacteria" id="CTQ77667">
        <property type="protein sequence ID" value="CTQ77667"/>
        <property type="gene ID" value="LAX5112_05005"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007387">
        <property type="entry name" value="TRAP_DctQ"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35011">
        <property type="entry name" value="PTHR35011"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04290">
        <property type="entry name" value="DctQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="31"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="63"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="96"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="134"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="176"/>
            <end position="196"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ77667.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="222" mass="25064" checksum="50FAD1E50507286A" modified="2015-12-09" version="1">MELWSDLAALISALGSQDSWTIRQALSPNTVYIFGAVFLALSGIMLAWIYHQVPVIERYFERTVMVTCYLLTAAIIFWGVIDRFVFSNQQPWSTTIPPFLFMIMALFGGAYNIRMRTHLSFSEFRMIMPRTAQFACLLLDFALWFGFALILLVTTLRVVALSASNFQIVLGTDNTMQWWFLLSAPIAATLMAARAVENIEDDIKNMRAGKPLLRQAVIGGDT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASZ6</accession>
    <name>A0A0M7ASZ6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Response_reg_2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_04963</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000037">
        <property type="protein sequence ID" value="CTQ77582.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674101.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000037.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77582">
        <property type="protein sequence ID" value="CTQ77582"/>
        <property type="gene ID" value="LAX5112_04963"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043834">
        <property type="entry name" value="REC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19192">
        <property type="entry name" value="Response_reg_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response_reg_2" evidence="2">
        <location>
            <begin position="14"/>
            <end position="268"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="29"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="45"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="78"/>
            <end position="100"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF19192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ77582.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="670" mass="73391" checksum="4D74687A2709CEA0" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ATC5</accession>
    <name>A0A0M7ATC5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Octopine transport system permease protein OccM</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">occM_2</name>
        <name evidence="8" type="ORF">LAX5112_05025</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="6">Cell membrane</location>
            <topology evidence="6">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000042">
        <property type="protein sequence ID" value="CTQ77712.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674146.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000042.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_05025"/>
    <dbReference type="EnsemblBacteria" id="CTQ77712">
        <property type="protein sequence ID" value="CTQ77712"/>
        <property type="gene ID" value="LAX5112_05025"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071705">
        <property type="term" value="P:nitrogen compound transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010065">
        <property type="entry name" value="AA_ABC_transptr_permease_3TM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01726">
        <property type="entry name" value="HEQRo_perm_3TM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="25"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="54"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="93"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="241"/>
            <end position="262"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="7">
        <location>
            <begin position="58"/>
            <end position="259"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ77712.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="271" mass="30816" checksum="7A7ACC9AE4B1B3E7" modified="2015-12-09" version="1">MSDTKVTMPAYVPPPPRRLLEPHRIFLIAVFGVIVFCAIYFMRWDWLPKYQTRLLYGIGETLFLLFSTAAVGFLLALPIGLVQVTGPWPLAALARGFCTLIRGTPLLLQLWLLYYGLGSVFAQYPEIRQSMFWPYLRDAWPYGFTALMLSFAAYEGEVMRGAFAGVPRGELEAARAFGMNRFTMFRRIWLPRAFYRALPTLSGETVLQLKSTPLVATITVVDAYAVITRVRQDTFLVYEPLLLLALIYMCLTGILVLLFRYLESRIPSRGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZNE9</accession>
    <name>A0A0M6ZNE9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Redox-sensitive transcriptional activator SoxR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">soxR_1</name>
        <name evidence="5" type="ORF">LAX5112_00035</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63696.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670096.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00035"/>
    <dbReference type="EnsemblBacteria" id="CTQ63696">
        <property type="protein sequence ID" value="CTQ63696"/>
        <property type="gene ID" value="LAX5112_00035"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009061">
        <property type="entry name" value="DNA-bd_dom_put_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000551">
        <property type="entry name" value="MerR-type_HTH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015358">
        <property type="entry name" value="Tscrpt_reg_MerR_DNA-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00376">
        <property type="entry name" value="MerR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09278">
        <property type="entry name" value="MerR-DNA-bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00040">
        <property type="entry name" value="HTHMERR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00422">
        <property type="entry name" value="HTH_MERR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46955">
        <property type="entry name" value="SSF46955"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00552">
        <property type="entry name" value="HTH_MERR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50937">
        <property type="entry name" value="HTH_MERR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH merR-type" evidence="4">
        <location>
            <begin position="3"/>
            <end position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50937"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ63696.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="138" mass="15253" checksum="E538E5213E9D6ADC" modified="2015-12-09" version="1">MKLLDISEVARQSGVAASALRHYEEKGLIHSAGRRGLKRLFGPEVLDQLAVIRLGKAAGFSLVEIKGMFGPDGRPSLSRSVLRTKADDLDDQIARLTSLRDMIRHVANCPAPRHIECPKFQKLIRISARRSAVKPGKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZP77</accession>
    <name>A0A0M6ZP77_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Stalked cell differentiation-controlling protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">pleD_2</name>
        <name evidence="2" type="ORF">LAX5112_00158</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64041.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670308.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00158"/>
    <dbReference type="EnsemblBacteria" id="CTQ64041">
        <property type="protein sequence ID" value="CTQ64041"/>
        <property type="gene ID" value="LAX5112_00158"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd01949">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000160">
        <property type="entry name" value="GGDEF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00990">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00267">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00254">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50887">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GGDEF" evidence="1">
        <location>
            <begin position="207"/>
            <end position="342"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64041.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="353" mass="39256" checksum="EE0753EECF04C032" modified="2015-12-09" version="1">MSDKDDHIRTIGYGESAIGYIRKNTLPAYPRSYELWYTYSAGYNQGLNRAINEAVKDNGRISTDEMLSLYGRFLSPTRLGDRLDDVGSKVSREVEEIVETLKLSADATSDYGAALEQAGMKIAGISDPDKLKLYVTHLVKSTQNAVASNRKLESQLLESKKHIENLQSSLEAIRYESLIDELTTLNNRKHFDNSLEKVIRNSIESGRGFALLMTDIDHFKKFNDTYGHQTGDQVLRLVALSVKQNISSQDIACRYGGEEFAIILPHSGLDEAVEVAEKIRAAVMAKELVKRSTGENLGRITISAGVAAYNPDDNEHTIVSRADEAMYAAKNAGRNLVKTENDLEMKENQENVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZP89</accession>
    <name>A0A0M6ZP89_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Putative glycosyltransferase CsbB</fullName>
            <ecNumber evidence="10">2.4.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">csbB</name>
        <name evidence="10" type="ORF">LAX5112_00324</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the GtrA family.</text>
    </comment>
    <dbReference type="EC" id="2.4.-.-" evidence="10"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64575.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00324"/>
    <dbReference type="EnsemblBacteria" id="CTQ64575">
        <property type="protein sequence ID" value="CTQ64575"/>
        <property type="gene ID" value="LAX5112_00324"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004582">
        <property type="term" value="F:dolichyl-phosphate beta-D-mannosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000271">
        <property type="term" value="P:polysaccharide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06442">
        <property type="entry name" value="DPM1_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039528">
        <property type="entry name" value="DPM1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001173">
        <property type="entry name" value="Glyco_trans_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007267">
        <property type="entry name" value="GtrA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43398">
        <property type="entry name" value="PTHR43398"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00535">
        <property type="entry name" value="Glycos_transf_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04138">
        <property type="entry name" value="GtrA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10" id="KW-0808">Transferase</keyword>
    <keyword evidence="3 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="265"/>
            <end position="287"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="324"/>
            <end position="352"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="358"/>
            <end position="376"/>
        </location>
    </feature>
    <feature type="domain" description="Glyco_trans_2-like" evidence="8">
        <location>
            <begin position="31"/>
            <end position="198"/>
        </location>
    </feature>
    <feature type="domain" description="GtrA" evidence="9">
        <location>
            <begin position="268"/>
            <end position="383"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009399"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00535"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF04138"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ64575.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="386" mass="41511" checksum="7A563B7E719B574B" modified="2015-12-09" version="1">MDGVVNLVDDQGGETSAPRSLKRDVLPAELSVILPSFNEAENIPILIGLLDKALAGTAWEAIVVDDNSPDGTTEVARKLALSDPRVRVIRRIGRRGLSGACIEGILASSAPYVAVMDADLQHDETLLPKMLSEIRAGDIDLVVASRKVEGGTVGEGLSKVRAWGSNIANGLAQKLLNVTLSDPMSGFFMVRREKAEELAPKLSPQGFKILLDLVSSAAGTLKIKELPFTFRERQHGESKLDTLVTLDYFGLLLAKYFGDIVSVRFLMFGLVGASGLVVHLAALRVFLLSDMSFNMSQTAASFVAMTSNFFLNNQLTYRDRRLRGVGALIGLLTFYAVCSVGVLANVGVANLIYADPAYWWLAGAAGAVMGAVWNYAASSALTWRKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPG3</accession>
    <name>A0A0M6ZPG3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00349</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64645.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670339.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ64645">
        <property type="protein sequence ID" value="CTQ64645"/>
        <property type="gene ID" value="LAX5112_00349"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008523">
        <property type="entry name" value="DUF805"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05656">
        <property type="entry name" value="DUF805"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="72"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="113"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="143"/>
            <end position="160"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64645.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="176" mass="19631" checksum="88AC52BA68D1973A" modified="2015-12-09" version="1">MRVTSNDLQKQLEQQDTVRGLSLPQVASTTFTAPAYTAATQETKPSKTSGLWSAVCFVGGTLFGFRGRVSRLDYWIIGSAYTVTSIIGYIAFAQTAGSFNWGDIASASHDIGFVLRFLTFCFVMMMLRFSLEARRFQDRGVTGYWYFGYLVPFLNVYLLLANSLMPGTKGANRYDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPI8</accession>
    <name>A0A0M6ZPI8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Succinyl-CoA synthetase subunit alpha</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00357</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64665.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670346.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00357"/>
    <dbReference type="EnsemblBacteria" id="CTQ64665">
        <property type="protein sequence ID" value="CTQ64665"/>
        <property type="gene ID" value="LAX5112_00357"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1490.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.261">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013815">
        <property type="entry name" value="ATP_grasp_subdomain_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003781">
        <property type="entry name" value="CoA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032875">
        <property type="entry name" value="Succ_CoA_lig_flav_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016102">
        <property type="entry name" value="Succinyl-CoA_synth-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13302">
        <property type="entry name" value="Acetyltransf_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13380">
        <property type="entry name" value="CoA_binding_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13607">
        <property type="entry name" value="Succ_CoA_lig"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00881">
        <property type="entry name" value="CoA_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52210">
        <property type="entry name" value="SSF52210"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="749"/>
            <end position="906"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64665.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="910" mass="98489" checksum="7250CBA4BC4AA739" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPL2</accession>
    <name>A0A0M6ZPL2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">RNA-binding protein Hfq</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2 3" type="primary">hfq</name>
        <name evidence="3" type="ORF">LAX5112_00247</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Homohexamer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the Hfq family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64297.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_006934516.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00247"/>
    <dbReference type="EnsemblBacteria" id="CTQ64297">
        <property type="protein sequence ID" value="CTQ64297"/>
        <property type="gene ID" value="LAX5112_00247"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01716">
        <property type="entry name" value="Hfq"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00436">
        <property type="entry name" value="Hfq"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005001">
        <property type="entry name" value="Hfq"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010920">
        <property type="entry name" value="LSM_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34772">
        <property type="entry name" value="PTHR34772"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17209">
        <property type="entry name" value="Hfq"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50182">
        <property type="entry name" value="SSF50182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02383">
        <property type="entry name" value="Hfq"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="1 2" id="KW-0346">Stress response</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00436"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ64297.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="84" mass="9582" checksum="1C5CEB9AC124E1AB" modified="2015-12-09" version="1">MAERAQNLQDTFLNHVRKQKTPLTIFLINGVKLQGVVTWFDNFCVLLRRDGHSQLVYKHAISTIMPNGPVQLFDQAEENAEKAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZR07</accession>
    <name>A0A0M6ZR07_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">HTH-type transcriptional regulator GltC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">gltC_2</name>
        <name evidence="3" type="ORF">LAX5112_00339</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64616.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008194828.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ64616">
        <property type="protein sequence ID" value="CTQ64616"/>
        <property type="gene ID" value="LAX5112_00339"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00039">
        <property type="entry name" value="HTHLYSR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="5"/>
            <end position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ64616.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="296" mass="32644" checksum="F9FAC0774D67B271" modified="2015-12-09" version="1">MSHALDIDQLRTFLAIAELGSFTKAGEAVHKTQSAVSMQMRRLEERVGQPIFIKDGRQSRLTEQGLRLVEYARRMIQLNDETLLAFNGKKELGFVKLGVPDDYADRLLPQVLAAFNRLNPSIEVQVECTSSAKLTKAVRDNELDVAITTSGDTSELRGEIIRREPLYWVTSEQHSAHTQDVLRLALGPSSCSWRRLSMDALDRAGRQYRVSYTSASGSALIGAVQAGLAVTVFPESAIRDGMRILDGRDGFPALPHCDIAMLRSDNARLPMHDRLCNHIIAAIGNVGTVSSREAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZR13</accession>
    <name>A0A0M6ZR13_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Protoporphyrinogen oxidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00122</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63944.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670151.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00122"/>
    <dbReference type="EnsemblBacteria" id="CTQ63944">
        <property type="protein sequence ID" value="CTQ63944"/>
        <property type="gene ID" value="LAX5112_00122"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002937">
        <property type="entry name" value="Amino_oxidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01593">
        <property type="entry name" value="Amino_oxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Amino_oxidase" evidence="1">
        <location>
            <begin position="10"/>
            <end position="285"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01593"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ63944.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="432" mass="48666" checksum="ED088D20BA5DDA30" modified="2015-12-09" version="1">MRIAVIGSGISGNSAAWALNSHHDVVLYEKRDRPGGHSATADIDYDGTPMSVDTGFIVYNELNYPNFTALLDHLGVATEISDMSFSLSADRGKLEWCGDGLNAVFAQRKNIVSPRFLKMLRDIFRFNKQAVADMKSGRLAGQTLGGYLEAERYSSGFINDYLLAMGAAIWSTPINEMRAYPAESFVAFFDNHRLLSFERQLWRTVSGGSRNYVKKLTEPFANKIRLGSPVAEILRTDGKVVVRDETGHTDTFDHVILASHSDQSLAMLGDPSSEEREILSAIRYRPNEVYLHRDEHLMPKKKKVWASWNYMSDREAGETRDVTVSYWMNRLQNLDRSKPVFVTLNPFQAPREDKTFAKYIYDHPQFDAKALAAKQQLNKIQGVNNTWYCGAWNGHGFHEDGLASGLNVAKALGAVLPWERDRQEPVMLEAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRD9</accession>
    <name>A0A0M6ZRD9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Glycine betaine transport ATP-binding protein OpuAA</fullName>
            <ecNumber evidence="6">3.6.3.32</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">opuAA_1</name>
        <name evidence="6" type="ORF">LAX5112_00404</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.32" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64791.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008193054.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00404"/>
    <dbReference type="EnsemblBacteria" id="CTQ64791">
        <property type="protein sequence ID" value="CTQ64791"/>
        <property type="gene ID" value="LAX5112_00404"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055052">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015220">
        <property type="term" value="F:choline transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022473">
        <property type="entry name" value="ABC_trnsptr_Choline_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03415">
        <property type="entry name" value="ABC_choXWV_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="27"/>
            <end position="274"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="66"/>
            <end position="73"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ64791.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="347" mass="37809" checksum="6C6ACAA30589FC76" modified="2015-12-09" version="1">MSASENTPVVSFKDVDIVFGDNPQSALPLIDAGNTRQEIQKETGQILGVAGATFDIYEGEVIVLMGLSGSGKSTLLRGVNGLNPVIRGEVQVHDGERYINPETCSEAELRQLRRRRIGMVFQQFGLLPWRTVSENVGFGLELAGVSQKDRDAKVKEQLKLVGLTGWGEKHVHELSGGMQQRVGLARAFATDAPLLLMDEPFSALDPLIRDKLQDELLDLQKELNRTIIFVSHDLDEAAKIGSRIAIMEGGRVIQLGTSQEIVKKPATPYVADFVSHMNPLNVLRARDIMVPPGSIPGSLANAPTCKADTTIREVARLKKESTEPVVVQRDGAVVGVIGENELLECML</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRJ8</accession>
    <name>A0A0M6ZRJ8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Assimilatory nitrite reductase [NAD(P)H] small subunit</fullName>
            <ecNumber evidence="6">1.7.1.4</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">nasE_1</name>
        <name evidence="6" type="ORF">LAX5112_00434</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.7.1.4" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64882.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670396.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00434"/>
    <dbReference type="EnsemblBacteria" id="CTQ64882">
        <property type="protein sequence ID" value="CTQ64882"/>
        <property type="gene ID" value="LAX5112_00434"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051537">
        <property type="term" value="F:2 iron, 2 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008942">
        <property type="term" value="F:nitrite reductase [NAD(P)H] activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042128">
        <property type="term" value="P:nitrate assimilation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.102.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012748">
        <property type="entry name" value="Rieske-like_NirD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017941">
        <property type="entry name" value="Rieske_2Fe-2S"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036922">
        <property type="entry name" value="Rieske_2Fe-2S_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13806">
        <property type="entry name" value="Rieske_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50022">
        <property type="entry name" value="SSF50022"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02378">
        <property type="entry name" value="nirD_assim_sml"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51296">
        <property type="entry name" value="RIESKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0408">Iron</keyword>
    <keyword evidence="3" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-0534">Nitrate assimilation</keyword>
    <keyword evidence="6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Rieske" evidence="5">
        <location>
            <begin position="9"/>
            <end position="104"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023063"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51296"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ64882.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="115" mass="12030" checksum="97FDE227D04C6CCD" modified="2015-12-09" version="1">MNAHPRNWVAIGDLTDIPREGARVVKTDAGCIAVFRTVDDEVFALDDRCPHKGGPLSQGIVHGTSVTCPLHNWVFDLATGLATGADEGAVPVTVAKVEGGKVLLAADDLARRSAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRT9</accession>
    <name>A0A0M6ZRT9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Naphthalene 1,2-dioxygenase subunit alpha</fullName>
            <ecNumber evidence="8">1.14.12.12</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">doxB</name>
        <name evidence="8" type="ORF">LAX5112_00643</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.14.12.12" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65475.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040452440.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00643"/>
    <dbReference type="EnsemblBacteria" id="CTQ65475">
        <property type="protein sequence ID" value="CTQ65475"/>
        <property type="gene ID" value="LAX5112_00643"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051537">
        <property type="term" value="F:2 iron, 2 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018625">
        <property type="term" value="F:naphthalene 1,2-dioxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.102.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017941">
        <property type="entry name" value="Rieske_2Fe-2S"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036922">
        <property type="entry name" value="Rieske_2Fe-2S_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015881">
        <property type="entry name" value="Ring-hydroxy_dOase_2Fe2S_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015879">
        <property type="entry name" value="Ring_hydroxy_dOase_asu_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001663">
        <property type="entry name" value="Rng_hydr_dOase-A"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43756">
        <property type="entry name" value="PTHR43756"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00355">
        <property type="entry name" value="Rieske"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00848">
        <property type="entry name" value="Ring_hydroxyl_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00090">
        <property type="entry name" value="RNGDIOXGNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50022">
        <property type="entry name" value="SSF50022"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51296">
        <property type="entry name" value="RIESKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00570">
        <property type="entry name" value="RING_HYDROXYL_ALPHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0001">2Fe-2S</keyword>
    <keyword evidence="8" id="KW-0223">Dioxygenase</keyword>
    <keyword evidence="4" id="KW-0408">Iron</keyword>
    <keyword evidence="5" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0520">NAD</keyword>
    <keyword evidence="3 8" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Rieske" evidence="7">
        <location>
            <begin position="34"/>
            <end position="141"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022714"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51296"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ65475.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="360" mass="41560" checksum="FCE81BFB0210B519" modified="2015-12-09" version="1">MNVHSQLIHSLEARYYTDPSHFEREKDGLLARTWQFAGHTSLLQKPGDYFTIDIAGESIVCLKDREGVLRAYFNVCQHRAHQLVQGEGNTKLLVCPYHSWTYELTGGLRSGPNVKSVPGFDRNQICLSTVQIEDFCGFLFVNLDPNAKPMDAWFPNVREELRSFVPHIDRLQPLEWVEIEENCNWKVSVENYSECYHCPINHPTFATGVIKPETYDIQPQGYCLRHTTECQNLERMTYEIDLDSNEHAGDYSSWFLWPLFSFQVYPGNILNTYHWRAVDVDHVVVWRGWYTIDGVDSEVVRRLAVQDRSTTVEEDIYLVESVQRGLKSRGYKPGPLVLDPACGVHSEHSVQALQGWMREA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZS58</accession>
    <name>A0A0M6ZS58_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Taurine--pyruvate aminotransferase</fullName>
            <ecNumber evidence="3">2.6.1.77</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">tpa_2</name>
        <name evidence="3" type="ORF">LAX5112_00450</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.6.1.77" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64930.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670409.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00450"/>
    <dbReference type="EnsemblBacteria" id="CTQ64930">
        <property type="protein sequence ID" value="CTQ64930"/>
        <property type="gene ID" value="LAX5112_00450"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008483">
        <property type="term" value="F:transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00610">
        <property type="entry name" value="OAT_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005814">
        <property type="entry name" value="Aminotrans_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00202">
        <property type="entry name" value="Aminotran_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000521">
        <property type="entry name" value="Transaminase_4ab_Lys_Orn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00600">
        <property type="entry name" value="AA_TRANSFER_CLASS_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="1 2" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="3" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU003560"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ64930.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="457" mass="49505" checksum="BA1AD1EDA4691649" modified="2015-12-09" version="1">MLRNDTLDQWDRENFFHPSTHLAQHARGEAPSRIVETGSGVYIEDRNGTKLLDAFAGLYCVNVGYGRSEISDAIAEQAKKLAYYHSYVGHGTEASITLSKMILDRAPTNMSKVYFGLGGSDANETNIKLVWYYNNILGRPEKKKIISRWRGYHGSGLMTGSLTGLELFHKKFDLPLAQVLHTEAPYYFRRPDTAMSEADFVAHCAAELEAMIEREGPETIAAFIGEPALGTGGLVPPPQGYWEAIQPILKKHDILLIADEVVTGFGRLGSMFGSEHYNIEADIITIAKGLTSAYAPLSGSIVSDKVWKILEQGTDENGPIGHGWTYSAHPIGAAAGIANLELVDSLGLVKNATAMGTYMKAALQDALGDHPNVGDIRGEGLLMAVELVEDRSARTFYDPARKIGPTLAGELLKHGVISRAMPQGDILGFAPPLCINQAEIDTVVRATKAAIDAVLPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTS2</accession>
    <name>A0A0M6ZTS2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">D-ribose transporter subunit RbsB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_00898</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66179.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00898"/>
    <dbReference type="EnsemblBacteria" id="CTQ66179">
        <property type="protein sequence ID" value="CTQ66179"/>
        <property type="gene ID" value="LAX5112_00898"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025997">
        <property type="entry name" value="SBP_2_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13407">
        <property type="entry name" value="Peripla_BP_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005808953" evidence="1">
        <location>
            <begin position="25"/>
            <end position="363"/>
        </location>
    </feature>
    <feature type="domain" description="Peripla_BP_4" evidence="2">
        <location>
            <begin position="29"/>
            <end position="294"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13407"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ66179.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="363" mass="39425" checksum="66656BFF5B9A64BF" modified="2015-12-09" version="1">MTILRSILLAFGVLVSVSVANVHAASFRVTFINPGGDSGFWGHVSKTMQAAAADFDVDLEILNADRRPYFMEQLLQERLSRGDLPDYFILVNELQEGARLMQLLDGPSVQTVFLLNTLTKSQYGVLNERVQSTIIGSITPNNEWAGYEMAESLISFGKSGGADGSGLRMLALTGDDSTPAALDRQRGMEQAAADSGVDLLGAVPVNWNEDIAYERAKTFLNRTKVDAIWGANDAIALGAKRAAIELGMKPGENIAFAGLNWSKAGMEAVKNGQLTMTHGGHFFAGAWVIVMLYDYHNRPAPKSALDNVSFQMSAITRDNVNLFMERLGDQNWAKIDFLGFSQVVTGLAQYDFSATAILNAAKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTU2</accession>
    <name>A0A0M6ZTU2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Aminomethyltransferase</fullName>
            <ecNumber evidence="6">2.1.2.10</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">gcvT_4</name>
        <name evidence="6" type="ORF">LAX5112_00731</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the GcvT family.</text>
    </comment>
    <dbReference type="EC" id="2.1.2.10" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65717.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670663.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00731"/>
    <dbReference type="EnsemblBacteria" id="CTQ65717">
        <property type="protein sequence ID" value="CTQ65717"/>
        <property type="gene ID" value="LAX5112_00731"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004047">
        <property type="term" value="F:aminomethyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1360.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006076">
        <property type="entry name" value="FAD-dep_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032503">
        <property type="entry name" value="FAO_M"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013977">
        <property type="entry name" value="GCV_T_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006222">
        <property type="entry name" value="GCV_T_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029043">
        <property type="entry name" value="GcvT/YgfZ_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027266">
        <property type="entry name" value="TrmE/GcvT_dom1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01266">
        <property type="entry name" value="DAO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16350">
        <property type="entry name" value="FAO_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01571">
        <property type="entry name" value="GCV_T"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08669">
        <property type="entry name" value="GCV_T_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101790">
        <property type="entry name" value="SSF101790"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="DAO" evidence="2">
        <location>
            <begin position="8"/>
            <end position="367"/>
        </location>
    </feature>
    <feature type="domain" description="FAO_M" evidence="5">
        <location>
            <begin position="371"/>
            <end position="424"/>
        </location>
    </feature>
    <feature type="domain" description="GCV_T" evidence="3">
        <location>
            <begin position="427"/>
            <end position="698"/>
        </location>
    </feature>
    <feature type="domain" description="GCV_T_C" evidence="4">
        <location>
            <begin position="723"/>
            <end position="805"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008609"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01266"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01571"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF08669"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF16350"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ65717.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="813" mass="88938" checksum="1EC8B1B8C661495B" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZU43</accession>
    <name>A0A0M6ZU43_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Na(+)-translocating NADH-quinone reductase subunit E</fullName>
            <shortName evidence="9">Na(+)-NQR subunit E</shortName>
            <shortName evidence="9">Na(+)-translocating NQR subunit E</shortName>
            <ecNumber evidence="9">7.2.1.1</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">NQR complex subunit E</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="9">NQR-1 subunit E</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9 10" type="primary">nqrE</name>
        <name evidence="10" type="ORF">LAX5112_00738</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>a ubiquinone + H(+) + n Na(+)(in) + NADH = a ubiquinol + n Na(+)(out) + NAD(+)</text>
            <dbReference type="Rhea" id="RHEA:47748"/>
            <dbReference type="Rhea" id="RHEA-COMP:9565"/>
            <dbReference type="Rhea" id="RHEA-COMP:9566"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16389"/>
            <dbReference type="ChEBI" id="CHEBI:17976"/>
            <dbReference type="ChEBI" id="CHEBI:29101"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="EC" id="7.2.1.1"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="9">Composed of six subunits; NqrA, NqrB, NqrC, NqrD, NqrE and NqrF.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cell membrane</location>
            <topology evidence="9">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the NqrDE/RnfAE family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="7.2.1.1" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65736.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008195880.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00738"/>
    <dbReference type="EnsemblBacteria" id="CTQ65736">
        <property type="protein sequence ID" value="CTQ65736"/>
        <property type="gene ID" value="LAX5112_00738"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009276">
        <property type="term" value="C:Gram-negative-bacterium-type cell wall"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016655">
        <property type="term" value="F:oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022904">
        <property type="term" value="P:respiratory electron transport chain"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006814">
        <property type="term" value="P:sodium ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00429">
        <property type="entry name" value="NqrE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003667">
        <property type="entry name" value="NqrDE/RnfAE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010967">
        <property type="entry name" value="NqrE"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30335:SF1">
        <property type="entry name" value="PTHR30335:SF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02508">
        <property type="entry name" value="Rnf-Nqr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006102">
        <property type="entry name" value="NQR_DE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01940">
        <property type="entry name" value="nqrE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 9" id="KW-0406">Ion transport</keyword>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-0520">NAD</keyword>
    <keyword evidence="10" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0915">Sodium</keyword>
    <keyword evidence="9" id="KW-0739">Sodium transport</keyword>
    <keyword evidence="4 9" id="KW-1278">Translocase</keyword>
    <keyword evidence="3 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2 9" id="KW-0813">Transport</keyword>
    <keyword evidence="7 9" id="KW-0830">Ubiquinone</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="79"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="110"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="144"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="176"/>
            <end position="197"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023075"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ65736.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="202" mass="21509" checksum="81CA6B2F138465B4" modified="2015-12-09" version="1">MEHMLSLAVKAIFVENLALSFFLGMCTFIAVSKKISTAIGLGISVMIVQAITVPANNLILTYLLAPGALAWAGFSNVDLTFLGLISYIGVIAALVQILEMVLDKYFPPLYNALGVFLPLITVNCAILGGSLFMVERDYNFGESVTYGLSSGFGWALAITAMAGVREKLKYSDIPDGLQGLGITFITAGLMALAFMSFSGVKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUL0</accession>
    <name>A0A0M6ZUL0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Bacterial extracellular solute-binding proteins, family 3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_00983</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66479.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ66479">
        <property type="protein sequence ID" value="CTQ66479"/>
        <property type="gene ID" value="LAX5112_00983"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809087" evidence="2">
        <location>
            <begin position="28"/>
            <end position="249"/>
        </location>
    </feature>
    <feature type="domain" description="PBPb" evidence="3">
        <location>
            <begin position="61"/>
            <end position="195"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00497"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ66479.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="249" mass="27666" checksum="8628D7650E8682D7" modified="2015-12-09" version="1">MLNFVKRSNLVCGLFFLSLFLAKSATAAELKISASEAMRPTGKPNTFDGQTVIQIVSGALDKIGWRYSFVFAPSKRAYLMAKNTQVDATIPRYKTAAGESEMLYSDPIFILEHTAYVRAGSLMGASEIDDLRGARYCLPLGSSLTEPMRTMIDQGNLTIERPESYPDCYKMIHVGRADFTTTDPRAAVTFTKLAGLPLSDFRRLPNPIHSRTLHLVVSREHKNGAHVISEFNRGLQLYHSENIEEPDGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUV2</accession>
    <name>A0A0M6ZUV2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">ABC-type uncharacterized transport system, periplasmic component</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_00577</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the bacterial solute-binding protein 1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65294.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670505.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00577"/>
    <dbReference type="EnsemblBacteria" id="CTQ65294">
        <property type="protein sequence ID" value="CTQ65294"/>
        <property type="gene ID" value="LAX5112_00577"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006059">
        <property type="entry name" value="SBP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027020">
        <property type="entry name" value="YnjB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13416">
        <property type="entry name" value="SBP_bac_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF029172">
        <property type="entry name" value="UCP029172_ABC_sbc_YnjB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0574">Periplasm</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="6">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809112" evidence="6">
        <location>
            <begin position="25"/>
            <end position="406"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008520"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ65294.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="406" mass="44184" checksum="540375E8738B408A" modified="2015-12-09" version="1">MKRLLTAAAAAIISGLFTLQPVSAQDSDWQDVLDEAKGQTVYFHAWGGEPRINAYIQWAAREVENLYGVRVVHVKVSDTASVVSQVLAEKSVGKTSGGGVDLVWINGENFAAMKTNELLAEPGWAQSLPNWTYVDTENKPTVLVDFTVPTDGQESPWGMAKLVFMFDTARLDTPPASLDALLAYAKSNPGRFSYPQPPNFYGTTFLKQALLNTIADTSVLSAPVDPDQFEAQTAPLFNFLDELHPHLWRQGQAFPKNAAHMRQLLADSEMDIAFSFNPGDASGAIVNGELPPTVRTFVFDDGTVGNTHFVAIPFNSSAQEGAQVFANHLLSPMAQMRKQDPKIWGDPTVLNVADLPANEKALFDTQDLGPATLTPEELGPTLPEPHPSWVTALEQTWATRYGAGGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVE5</accession>
    <name>A0A0M6ZVE5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase</fullName>
            <ecNumber evidence="3">2.4.1.289</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">wbbL_1</name>
        <name evidence="3" type="ORF">LAX5112_00912</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.4.1.289" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66216.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670797.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00912"/>
    <dbReference type="EnsemblBacteria" id="CTQ66216">
        <property type="protein sequence ID" value="CTQ66216"/>
        <property type="gene ID" value="LAX5112_00912"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102096">
        <property type="term" value="F:decaprenyl-N-acetyl-alpha-D-glucosaminyl-pyrophosphate:dTDP-alpha-L-rhamnose rhamnosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001173">
        <property type="entry name" value="Glyco_trans_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00535">
        <property type="entry name" value="Glycos_transf_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="239"/>
            <end position="256"/>
        </location>
    </feature>
    <feature type="domain" description="Glyco_trans_2-like" evidence="2">
        <location>
            <begin position="34"/>
            <end position="162"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00535"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ66216.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="287" mass="32128" checksum="419BE29D2A2A2842" modified="2015-12-09" version="1">MASPQDLTTVTRLIVTFNSADVLEYSRIPAHELATLAVDNASSDDTPAEAQTLGYEVLNLDQNVGYANAIMAGLDRINTEFVLIANPDVQISTRAIQVLLDAADRQTDCSLFIPRIFKPDGSEFFRYETRFDPRVKNRVPPSTDQNVDTVSGAVLLVRRKPFIQHGGFDTNIFLYFEDDELSLRFRKLNQPMRFVADASAKHIGDGSSGNTVSANRIKDISFGWSWGYLMDKMRLGNRWITFLKILGKLLVYVASFRSSKARRQMGIANGFLKNLAGHPAPFLRNSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVE8</accession>
    <name>A0A0M6ZVE8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">HTH-type transcriptional regulator FrlR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">frlR</name>
        <name evidence="2" type="ORF">LAX5112_00620</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65433.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00620"/>
    <dbReference type="EnsemblBacteria" id="CTQ65433">
        <property type="protein sequence ID" value="CTQ65433"/>
        <property type="gene ID" value="LAX5112_00620"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07377">
        <property type="entry name" value="WHTH_GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1410.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028978">
        <property type="entry name" value="Chorismate_lyase_/UTRA_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012702">
        <property type="entry name" value="CP_lyase_PhnF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000524">
        <property type="entry name" value="Tscrpt_reg_HTH_GntR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011663">
        <property type="entry name" value="UTRA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00392">
        <property type="entry name" value="GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07702">
        <property type="entry name" value="UTRA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00035">
        <property type="entry name" value="HTHGNTR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00345">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00866">
        <property type="entry name" value="UTRA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64288">
        <property type="entry name" value="SSF64288"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02325">
        <property type="entry name" value="C_P_lyase_phnF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50949">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH gntR-type" evidence="1">
        <location>
            <begin position="21"/>
            <end position="89"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65433.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="258" mass="28642" checksum="99C0CAEC1AEF0D0D" modified="2015-12-09" version="1">MTDLELFRTLAREPYQAKGEKAIWLQICDRLQLAYENGVLAPGIKLPGEVHLAEVFQVSRITIRRALSKLQQEGHLHARKGVGIFVRQRPERYEVESNMRFADGFKVARDRVTTETLNLMRGDVSFEGGVALALPTGSQVIKLLRRRILDGEPIYLTAKEFPAARFPDFEAVYNETGSVTEVYKAHGVTRYERAETRISGGFATARQADGLNLSPRTPVLEVVAINCDPTGTPIEYNAGCWPLSSVEIVFPGAAPIKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWL7</accession>
    <name>A0A0M6ZWL7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Acyl-CoA dehydrogenase</fullName>
            <ecNumber evidence="10">1.3.99.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">acdA_1</name>
        <name evidence="10" type="ORF">LAX5112_01050</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 6">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the acyl-CoA dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.3.99.-" evidence="10"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66667.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670934.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01050"/>
    <dbReference type="EnsemblBacteria" id="CTQ66667">
        <property type="protein sequence ID" value="CTQ66667"/>
        <property type="gene ID" value="LAX5112_01050"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003995">
        <property type="term" value="F:acyl-CoA dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006629">
        <property type="term" value="P:lipid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01162">
        <property type="entry name" value="IBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.540.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006089">
        <property type="entry name" value="Acyl-CoA_DH_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006091">
        <property type="entry name" value="Acyl-CoA_Oxase/DH_mid-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046373">
        <property type="entry name" value="Acyl-CoA_Oxase/DH_mid-dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036250">
        <property type="entry name" value="AcylCo_DH-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009075">
        <property type="entry name" value="AcylCo_DH/oxidase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013786">
        <property type="entry name" value="AcylCoA_DH/ox_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037069">
        <property type="entry name" value="AcylCoA_DH/ox_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009100">
        <property type="entry name" value="AcylCoA_DH/oxidase_NM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034178">
        <property type="entry name" value="IBD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00441">
        <property type="entry name" value="Acyl-CoA_dh_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02770">
        <property type="entry name" value="Acyl-CoA_dh_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02771">
        <property type="entry name" value="Acyl-CoA_dh_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47203">
        <property type="entry name" value="SSF47203"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56645">
        <property type="entry name" value="SSF56645"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00072">
        <property type="entry name" value="ACYL_COA_DH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00073">
        <property type="entry name" value="ACYL_COA_DH_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6" id="KW-0274">FAD</keyword>
    <keyword evidence="3 6" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="6 10" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Acyl-CoA_dh_N" evidence="9">
        <location>
            <begin position="6"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="domain" description="Acyl-CoA_dh_M" evidence="8">
        <location>
            <begin position="121"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="domain" description="Acyl-CoA_dh_1" evidence="7">
        <location>
            <begin position="227"/>
            <end position="377"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="5">
        <location>
            <position position="362"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009347"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR634178-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU362125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00441"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF02770"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF02771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ66667.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="379" mass="41322" checksum="65EBFA553DD53862" modified="2015-12-09" version="1">MDFQLNEDRRAIRDMAASFAREELAPHAAQWDEDSHFPIAVMRKAAELGLAGIYVRDDVGGSALTRLDAALIFEELSKGCTSTAAYLSIHNMVSWIIDTFGNEDLRQKFLPKLCTMELLTSYCLTEPGSGSDAAALRTTAKDDGDHYILNGSKAFISGGGVSDLYAVMVRTGDEGPGGISCLLVEEGTPGLSFGANEVKMGWKSQPTAQVNFQDCRVPKSNLIGVEGQGFKIAMAALDGGRLNIGACSIGPAQECLDQAIAYMRERKQFGKPLTAFQALQFRLADMATELEAARLLLYKAATEVDAKAPDAPKFAAMAKRLATDTGFKVVNDALQLHGGYGYLRDYPIERFLRDVRVHQILEGTNEVMRLIISRHLLKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWP5</accession>
    <name>A0A0M6ZWP5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">CO-responsive transcriptional regulator RcoM</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">rcoM</name>
        <name evidence="5" type="ORF">LAX5112_00816</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65954.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670725.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00816"/>
    <dbReference type="EnsemblBacteria" id="CTQ65954">
        <property type="protein sequence ID" value="CTQ65954"/>
        <property type="gene ID" value="LAX5112_00816"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007492">
        <property type="entry name" value="LytTR_DNA-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012073">
        <property type="entry name" value="LytTR_MHYT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005330">
        <property type="entry name" value="MHYT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04397">
        <property type="entry name" value="LytTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03707">
        <property type="entry name" value="MHYT"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF036615">
        <property type="entry name" value="MHYT_LytTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00850">
        <property type="entry name" value="LytTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50930">
        <property type="entry name" value="HTH_LYTTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50924">
        <property type="entry name" value="MHYT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="41"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="73"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="108"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="140"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="167"/>
            <end position="186"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="206"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="domain" description="MHYT" evidence="3">
        <location>
            <begin position="5"/>
            <end position="193"/>
        </location>
    </feature>
    <feature type="domain" description="HTH LytTR-type" evidence="4">
        <location>
            <begin position="302"/>
            <end position="407"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="398"/>
            <end position="422"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="398"/>
            <end position="413"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50924"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50930"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ65954.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="422" mass="45341" checksum="A1734BDBB8F746F6" modified="2015-12-09" version="1">MTVTHEPWLVALSLIMAFQGSFVGLGLAVQVRTSTEPRRRWLLAGAALTLALAIWSMHFVGMLAARLPVLTDFLVLPTLLSFLVCVLVVGIGVFAASNRQLTPVRLGIAAFVMGAGICTMHYLGMYALHLSLSMFHDTAYVFASFLIAFNASGLALWLLFGPGRRPPMFVSAVVMALAISAMHYIAMAGLTVEPIAAPTPSLAPALNPGTLAILVSCVAFLVSGLFLLKLVPEQPLRVDEAPHFDDDLILQTVAPVSATSAEAAPRATSFSKQEQISNRTAHGLQSAASPVRSQKLTAKRMLPIEHDGQKAQIAATEIVAIHADAHYTKLFDGSREYFCPLSISEAERQLDSKAFNRVHRSHIVNLARVASFKRSGDGGLLVLQGDAGQTVPVSRSRWSRVKSQLTTMSETKTPVPDPAPAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWQ5</accession>
    <name>A0A0M6ZWQ5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01260</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67195.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671095.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67195">
        <property type="protein sequence ID" value="CTQ67195"/>
        <property type="gene ID" value="LAX5112_01260"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67195.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="83" mass="9244" checksum="A82CB584FBD47726" modified="2015-12-09" version="1">MTDTTGFLINQTRVIAAKFGGKSKLADALGHKSRSTVQRWDAAGWIRPVYYRDILEAAKKNGIPLEHSDFHTIDPQAFSRKAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWY4</accession>
    <name>A0A0M6ZWY4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Protein involved in cellulose biosynthesis (CelD)</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01009</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66550.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670910.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01009"/>
    <dbReference type="EnsemblBacteria" id="CTQ66550">
        <property type="protein sequence ID" value="CTQ66550"/>
        <property type="gene ID" value="LAX5112_01009"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038740">
        <property type="entry name" value="BioF2-like_GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13480">
        <property type="entry name" value="Acetyltransf_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Acetyltransf_6" evidence="2">
        <location>
            <begin position="187"/>
            <end position="342"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13480"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ66550.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="400" mass="44214" checksum="450D08CCF581E8BE" modified="2015-12-09" version="1">MSAAAIDISGTHPGSGSGNDDLQLTEDLEELASEWTQLESAGIGNPYHGFLWCKAFQNTLGTAERSRPLIALLRSAGRPVLLLPLSLFTKNGVRVLTFLGARIGNQNTGLWDKAYYEAVGPEAIRNVLHQLCQKSNADCIDLQNVPCQWTGRPHPLVLGNAQLSPNPLYRGSVTGTFEDVFKTLHSKSARKNLTRKQRHLQDAGGYEIRVCQQPAEIEAGLEAFLEQREARAQITGVPNAFSSPEAKAFLRQATQSPALSVTPDKMSAPLKIWTLSVSTQIRATYMCARDGGTLHAYSNSVAHDEFLKNSPGLVLIREIVEKICADPDTKTLDLGIGEEHYKTSWTRPEPMCDSRYSRTARGKIYSAVQTAKTRLISRIRNSDRLWPMIKNLRRMRASGN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWY6</accession>
    <name>A0A0M6ZWY6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Cytochrome c2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">LAX5112_00842</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66023.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670746.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00842"/>
    <dbReference type="EnsemblBacteria" id="CTQ66023">
        <property type="protein sequence ID" value="CTQ66023"/>
        <property type="gene ID" value="LAX5112_00842"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.760.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009056">
        <property type="entry name" value="Cyt_c-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036909">
        <property type="entry name" value="Cyt_c-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002327">
        <property type="entry name" value="Cyt_c_1A/1B"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00034">
        <property type="entry name" value="Cytochrom_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13442">
        <property type="entry name" value="Cytochrome_CBB3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00604">
        <property type="entry name" value="CYTCHRMECIAB"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46626">
        <property type="entry name" value="SSF46626"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51007">
        <property type="entry name" value="CYTC"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 5" id="KW-0349">Heme</keyword>
    <keyword evidence="4 5" id="KW-0408">Iron</keyword>
    <keyword evidence="3 5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="7">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809027" evidence="7">
        <location>
            <begin position="24"/>
            <end position="369"/>
        </location>
    </feature>
    <feature type="domain" description="Cytochrome c" evidence="8">
        <location>
            <begin position="24"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="domain" description="Cytochrome c" evidence="8">
        <location>
            <begin position="201"/>
            <end position="289"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="130"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="130"/>
            <end position="149"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00433"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ66023.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="369" mass="39470" checksum="A6DEF94795D2F18F" modified="2015-12-09" version="1">MLKSLKALSLGTALVALASTATAGDAAKGEKVFKKCQACHAVGDGAKNKVGPHLNDLFGRTAGEIDGYKYSNAMIKAGEDGLVWDMQTTRTYLAKPKAMIKGTKMAFAGLRKDADLDNILAYLATYSENADGGSEQSEAPSQDNGSQVAAAPPATEPVAAAVSNTRDGGVFGLGRVALAEEVAAWDIDIRPDGQGLPEGSGTVADGEVLYTDNCAMCHGDFGEAVDRWPVLAGGHDTLTDDRPEKTIGSYWPYLSTVYDYVRRAMPFGNARSLSDDEVYAITAYLLYLNDLVDDEEFELSKENFLDIRLPNEENFIADDRAEEQHYAQNNEPCMADCKPGSVEITMRARILDVTPEDGGDDNAGVGAVD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZX21</accession>
    <name>A0A0M6ZX21_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative cysteine desulfurase</fullName>
            <ecNumber evidence="3">2.8.1.7</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">csd_3</name>
        <name evidence="3" type="ORF">LAX5112_01092</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.8.1.7" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66786.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670960.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01092"/>
    <dbReference type="EnsemblBacteria" id="CTQ66786">
        <property type="protein sequence ID" value="CTQ66786"/>
        <property type="gene ID" value="LAX5112_01092"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031071">
        <property type="term" value="F:cysteine desulfurase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000192">
        <property type="entry name" value="Aminotrans_V_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00266">
        <property type="entry name" value="Aminotran_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Aminotran_5" evidence="2">
        <location>
            <begin position="51"/>
            <end position="415"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00266"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ66786.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="493" mass="52938" checksum="C250CBFA2C252A93" modified="2015-12-09" version="1">MTQSQHHASSGTALEAFKRTLKGPDLIGRLRAGLIGDGMVIEGPFGPKKMIYADYVASGRALRQVEDFVMEEVLPVYANSHTEASYCGMTMTRMREAARSEIARICRAFDSYTTVFCGSGATAGLNRLVHLLGVSGAAERGENPLVILGPYEHHSDILPWRESGAEVIEIGEAADGGPDLLELDAVLTDKASGRLTVGAFSLMSNVTGIVTDDVAVTRILKRHGALSVWDCAGSGPYLPIDMKPGTDAEKDAVVVSPHKFIGGPAASGVMIVRKQAVCIKTPVFPGGGTVRFVSPWGHDYSENIAAREEAGTPNVIGDIRAALAFLVKEAIGQAEMDARNEAWRARALAAWSVNPAIEILGNLEASHTMPIFSFRVKDLERGGYIHQQLVTRMLSDVYGVQARGGCACAGPYAHRLLGIDRAESDALRDGILSGEELKKPGWTRLNFSVLLDEVKADQIIEAVDQLARKPYPVADSYSCDETTARFKAAQKAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZX72</accession>
    <name>A0A0M6ZX72_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Riboflavin biosynthesis protein RibD</fullName>
        </recommendedName>
        <domain>
            <recommendedName>
                <fullName evidence="10">Diaminohydroxyphosphoribosylaminopyrimidine deaminase</fullName>
                <shortName evidence="10">DRAP deaminase</shortName>
                <ecNumber evidence="10">3.5.4.26</ecNumber>
            </recommendedName>
            <alternativeName>
                <fullName evidence="10">Riboflavin-specific deaminase</fullName>
            </alternativeName>
        </domain>
        <domain>
            <recommendedName>
                <fullName evidence="10">5-amino-6-(5-phosphoribosylamino)uracil reductase</fullName>
                <ecNumber evidence="10">1.1.1.193</ecNumber>
            </recommendedName>
            <alternativeName>
                <fullName evidence="10">HTP reductase</fullName>
            </alternativeName>
        </domain>
    </protein>
    <gene>
        <name evidence="15" type="primary">ribD</name>
        <name evidence="15" type="ORF">LAX5112_01037</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 10">Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'-phosphate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)-pyrimidine + H(+) + H2O = 5-amino-6-(5-phospho-D-ribosylamino)uracil + NH4(+)</text>
            <dbReference type="Rhea" id="RHEA:21868"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="ChEBI" id="CHEBI:58453"/>
            <dbReference type="ChEBI" id="CHEBI:58614"/>
            <dbReference type="EC" id="3.5.4.26"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>5-amino-6-(5-phospho-D-ribitylamino)uracil + NADP(+) = 5-amino-6-(5-phospho-D-ribosylamino)uracil + H(+) + NADPH</text>
            <dbReference type="Rhea" id="RHEA:17845"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="ChEBI" id="CHEBI:58421"/>
            <dbReference type="ChEBI" id="CHEBI:58453"/>
            <dbReference type="EC" id="1.1.1.193"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="10 13">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="10 13">Binds 1 zinc ion.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2 10">Cofactor biosynthesis; riboflavin biosynthesis; 5-amino-6-(D-ribitylamino)uracil from GTP: step 2/4.</text>
    </comment>
    <comment type="pathway">
        <text evidence="3 10">Cofactor biosynthesis; riboflavin biosynthesis; 5-amino-6-(D-ribitylamino)uracil from GTP: step 3/4.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5 10">In the C-terminal section; belongs to the HTP reductase family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4 10">In the N-terminal section; belongs to the cytidine and deoxycytidylate deaminase family.</text>
    </comment>
    <dbReference type="EC" id="3.5.4.26" evidence="10"/>
    <dbReference type="EC" id="1.1.1.193" evidence="10"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66630.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670926.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01037"/>
    <dbReference type="EnsemblBacteria" id="CTQ66630">
        <property type="protein sequence ID" value="CTQ66630"/>
        <property type="gene ID" value="LAX5112_01037"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00275">
        <property type="reaction ID" value="UER00401"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008703">
        <property type="term" value="F:5-amino-6-(5-phosphoribosylamino)uracil reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008835">
        <property type="term" value="F:diaminohydroxyphosphoribosylaminopyrimidine deaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009231">
        <property type="term" value="P:riboflavin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.430.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016192">
        <property type="entry name" value="APOBEC/CMP_deaminase_Zn-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002125">
        <property type="entry name" value="CMP_dCMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016193">
        <property type="entry name" value="Cytidine_deaminase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024072">
        <property type="entry name" value="DHFR-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004794">
        <property type="entry name" value="Eubact_RibD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002734">
        <property type="entry name" value="RibDG_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00383">
        <property type="entry name" value="dCMP_cyt_deam_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01872">
        <property type="entry name" value="RibD_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006769">
        <property type="entry name" value="RibD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53597">
        <property type="entry name" value="SSF53597"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53927">
        <property type="entry name" value="SSF53927"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00326">
        <property type="entry name" value="eubact_ribD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00903">
        <property type="entry name" value="CYT_DCMP_DEAMINASES_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51747">
        <property type="entry name" value="CYT_DCMP_DEAMINASES_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7 10 13" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-0511">Multifunctional enzyme</keyword>
    <keyword evidence="10 12" id="KW-0521">NADP</keyword>
    <keyword evidence="10" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 10" id="KW-0686">Riboflavin biosynthesis</keyword>
    <keyword evidence="8 10 13" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="CMP/dCMP-type deaminase" evidence="14">
        <location>
            <begin position="6"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="11">
        <location>
            <position position="62"/>
        </location>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="60"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <note>catalytic</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="85"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <note>catalytic</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="94"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <note>catalytic</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="164"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="194"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="206"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="210"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="214"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="217"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="305"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <begin position="307"/>
            <end position="313"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002151"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004882"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004910"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00005259"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00007417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022619"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023268"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRNR" id="PIRNR006769"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRSR" id="PIRSR006769-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRSR" id="PIRSR006769-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="PIRSR" id="PIRSR006769-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS51747"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="CTQ66630.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="375" mass="39736" checksum="B1E6CFA60355D8CD" modified="2015-12-09" version="1">MTSITETDNRFMAAAERLARRGLGRVWPNPAVAALIVQENSEGVPVLVGRGVTSRPGMAHAEVNALTQAGELAKGATCYVTLEPCSHYGRTPPCSLALIEAGVSRVVVGMMDPNPRVSGRGVGMLQDAGIEVVTGVRERALKDLYRGFTYRQRRHRPSVFLKLAVSKDGFIGREGEGQIKISGPISMRMVHGFRAASDAILVGIGTALADDPQLTCRLPGLHARSPVRVVVDRQARLPLMSKLVRTCVDVPVWLVCGNAADADKVNALAAAGVNIIRVPATQTGIDPDVILSALATRGITRLMVEGGARLASSFLNAGLIDDLCVVTGDMEIGEGGIPALHDLDLANVLTDPQFARIGAGYLGADRYTYLRKSGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXQ3</accession>
    <name>A0A0M6ZXQ3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Neu5Ac permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">siaT_9</name>
        <name evidence="5" type="ORF">LAX5112_01105</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66820.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670969.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01105"/>
    <dbReference type="EnsemblBacteria" id="CTQ66820">
        <property type="protein sequence ID" value="CTQ66820"/>
        <property type="gene ID" value="LAX5112_01105"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010656">
        <property type="entry name" value="DctM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004681">
        <property type="entry name" value="TRAP_DctM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33362">
        <property type="entry name" value="PTHR33362"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06808">
        <property type="entry name" value="DctM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006066">
        <property type="entry name" value="HI0050"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00786">
        <property type="entry name" value="dctM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="6"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="54"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="94"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="135"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="168"/>
            <end position="193"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="214"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="242"/>
            <end position="260"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="272"/>
            <end position="293"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="313"/>
            <end position="331"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="336"/>
            <end position="353"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="359"/>
            <end position="385"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="397"/>
            <end position="416"/>
        </location>
    </feature>
    <feature type="domain" description="DctM" evidence="4">
        <location>
            <begin position="8"/>
            <end position="417"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF06808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ66820.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="429" mass="45668" checksum="412298BCB66D6E84" modified="2015-12-09" version="1">MLIWFLPVFLTFLMIGLPVFFGLLAAPGILLWLNGQERDITLLYRNVYNGMDSFPLMAIPFFMLAGELMNKGGITMRLVEFSQALMGHLRGGLAHVNILSSMLFAGLSGSAVADTSALGSMLIPAMEKQGYTRKFAAAITAASSVIGPIIPPSGIMIIYAYVMGESVAALFLAGIVPGVMVGVGLMLMVKFMADKYDFPIASRKSTWAERGQASLKAFFPLLTPVIILGGILAGVFTPTEAAAVAVAYALFIGLFVLRSLKPHEIPGVLNRAGITSAVVLLLVGAAMAFKTVVSLSYAPQIMADFVLSLTENPLLLLFLINLLLFIVGMFLDAGPAIIILGPILGPIFLELGVDPIHFAIIMSVNLTIGLATPPMGLVLFVAASVSKERVETISKAILPFLAVEIAVIFLITYIPALSMTIPRLTGFAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYA5</accession>
    <name>A0A0M6ZYA5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01302</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67271.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01302"/>
    <dbReference type="EnsemblBacteria" id="CTQ67271">
        <property type="protein sequence ID" value="CTQ67271"/>
        <property type="gene ID" value="LAX5112_01302"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021727">
        <property type="entry name" value="DUF3299"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11736">
        <property type="entry name" value="DUF3299"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809035" evidence="1">
        <location>
            <begin position="27"/>
            <end position="181"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67271.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="181" mass="19852" checksum="1C417ED71BA40C92" modified="2015-12-09" version="1">MGKVRIKRSLLASALLLGLWGGSAQAEPFIVTWGELRADRPSSCSALLENYLTQPKCTQQAASARLLSRQYEKCAPGSADLDGKTVRIAGYAHPLEFQFKDVKEFLLIPPLRRDCTHPPPPLPDQVISVQFPNGMDVNADPVWVTGVLRRERAKTHLATANYTLQATSVTQATIPEVSLTN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYF0</accession>
    <name>A0A0M6ZYF0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01328</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67321.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671147.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67321">
        <property type="protein sequence ID" value="CTQ67321"/>
        <property type="gene ID" value="LAX5112_01328"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="43"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="76"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="106"/>
            <end position="126"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67321.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="142" mass="14974" checksum="46DCA4E9A5A9EF30" modified="2015-12-09" version="1">MTAEQFGKRVLAANALFCAACGFALIMLPGVLTELMFVTSGSWLFTGALGLGAGLVTTAAVVLWASRDTARMAQRLYILAALDVAWVLASAIVLLEFAAAFKATGWYIVAGIALIVADFAVAEFLAARKLSTPAHRHQRAEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYH1</accession>
    <name>A0A0M6ZYH1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">GDP-mannose pyrophosphatase NudK</fullName>
            <ecNumber evidence="3">3.6.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">nudK</name>
        <name evidence="3" type="ORF">LAX5112_01340</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <dbReference type="EC" id="3.6.1.-" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67341.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671156.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01340"/>
    <dbReference type="EnsemblBacteria" id="CTQ67341">
        <property type="protein sequence ID" value="CTQ67341"/>
        <property type="gene ID" value="LAX5112_01340"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016818">
        <property type="term" value="F:hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004385">
        <property type="entry name" value="NDP_pyrophosphatase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015797">
        <property type="entry name" value="NUDIX_hydrolase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000086">
        <property type="entry name" value="NUDIX_hydrolase_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00293">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55811">
        <property type="entry name" value="SSF55811"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00052">
        <property type="entry name" value="TIGR00052"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51462">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nudix hydrolase" evidence="2">
        <location>
            <begin position="49"/>
            <end position="187"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51462"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ67341.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="201" mass="22714" checksum="9E68FC79CCDAAE3D" modified="2015-12-09" version="1">MSAPVKETDFLKILNEELLSNNWGKVTKYTLDYRRRDGTWQRLTREVYDRGHGAACLLHNSETGCVLLTRQFRLPVWLTDGSAAFIEAPAGLLEGARPDERMRAELMEETGFEVSELEHLFDLQMSPGSITEILSYFRGSYQERQRTGEGGGAESEGEDIEVLHVPLEEALLMVSDGRIRDAKTVILLQDLALRELRAAKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="31" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYH3</accession>
    <name>A0A0M6ZYH3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Transcriptional regulatory protein CusR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">cusR</name>
        <name evidence="5" type="ORF">LAX5112_01354</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67367.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008190545.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01354"/>
    <dbReference type="EnsemblBacteria" id="CTQ67367">
        <property type="protein sequence ID" value="CTQ67367"/>
        <property type="gene ID" value="LAX5112_01354"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00383">
        <property type="entry name" value="trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001867">
        <property type="entry name" value="OmpR/PhoB-type_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039420">
        <property type="entry name" value="WalR-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48111">
        <property type="entry name" value="PTHR48111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00486">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00862">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51755">
        <property type="entry name" value="OMPR_PHOB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="1" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="3">
        <location>
            <begin position="3"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="domain" description="OmpR/PhoB-type" evidence="4">
        <location>
            <begin position="127"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="OmpR/PhoB-type" evidence="2">
        <location>
            <begin position="127"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="1">
        <location>
            <position position="52"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ67367.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="228" mass="25699" checksum="52A5DD22F4F8BBAD" modified="2015-12-09" version="1">MLQILVIEDDHEAANYLAKGLSELGHRADKADDGETGLQMALDRDYDILIVDRMLPKRDGLAVIEELRKSGNHTPVLILSALGQVDDRVTGLKAGGDDYLPKPYAFTELQARVEALARRPKSASQVETTYTVGDLTLDRMAHSCRRGDMEIPLQPREFRLLEYLMQHAGQVVTRTMLLENVWEYHFDPQTNVIDVHISRLRGKIDKGFDVPLLHTIRGAGYTIRDTAH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYZ7</accession>
    <name>A0A0M6ZYZ7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Anhydro-N-acetylmuramic acid kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01613</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68038.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01613"/>
    <dbReference type="EnsemblBacteria" id="CTQ68038">
        <property type="protein sequence ID" value="CTQ68038"/>
        <property type="gene ID" value="LAX5112_01613"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13302">
        <property type="entry name" value="Acetyltransf_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="46"/>
            <end position="149"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13302"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68038.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="178" mass="19811" checksum="E807597648DAFB22" modified="2015-12-09" version="1">MQTIILECDTIRLVPLSLSDTDLIKSLQVNCGGNGCLESSEACKATAAEKFVQSALQSQDDFGVSRWKAETQDGEFLGWAGFTPLSETSEISLGYCLPSTHRKVSNVPRRLCKALTDWFFRETYFSHLVSVVRVDNRAMRQVVLDAGFTHRESKAIDGIQADLFQMLSPSMQTYLMSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZH4</accession>
    <name>A0A0M6ZZH4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01606</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68019.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ68019">
        <property type="protein sequence ID" value="CTQ68019"/>
        <property type="gene ID" value="LAX5112_01606"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ68019.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="145" mass="16479" checksum="7DB5CE0272F54D5B" modified="2015-12-09" version="1">MKNGKNTDNTIAVEIADLIFDNIDSVKTHLNLDSYDTTAVVMRITAASDGEGGVSEAKLAQQLNITRPTMNRIIRRLLDTRHILAISDTSPKKYVFNFDYEPAQSKSDSKRAKLNFQRSVIDRCVAALLAVFWSFERYQFENEDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZL1</accession>
    <name>A0A0M6ZZL1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">UPF0260 protein LAX5112_01501</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01501</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UPF0260 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67741.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671310.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01501"/>
    <dbReference type="EnsemblBacteria" id="CTQ67741">
        <property type="protein sequence ID" value="CTQ67741"/>
        <property type="gene ID" value="LAX5112_01501"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00676">
        <property type="entry name" value="UPF0260"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005358">
        <property type="entry name" value="Puta_zinc/iron-chelating_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008228">
        <property type="entry name" value="UCP006173"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37421">
        <property type="entry name" value="PTHR37421"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03692">
        <property type="entry name" value="CxxCxxCC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006173">
        <property type="entry name" value="UCP006173"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67741.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="162" mass="18123" checksum="D57B89420B47F312" modified="2015-12-09" version="1">MGSGNSVDKDGGLPFWKTKSLEEMTDAEWESLCDGCARCCLNKLEDWDTGDIVWTDVACTLLDGMSCRCKDYENRAATVPDCIQLTPSEVNTLTWLPPTCGYRLVREGADLYWWHPLVSGDPETVHLAGVSVQNRTVSEDGMELEEYENHVVTWPGEMPEAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZP9</accession>
    <name>A0A0M6ZZP9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Xanthine-guanine phosphoribosyltransferase</fullName>
            <shortName evidence="3">XGPRT</shortName>
            <ecNumber evidence="3">2.4.2.22</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">Xanthine phosphoribosyltransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3 5" type="primary">gpt</name>
        <name evidence="5" type="ORF">LAX5112_01467</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Purine salvage pathway enzyme that catalyzes the transfer of the ribosyl-5-phosphate group from 5-phospho-alpha-D-ribose 1-diphosphate (PRPP) to the N9 position of the 6-oxopurines guanine and xanthine to form the corresponding ribonucleotides GMP (guanosine 5'-monophosphate) and XMP (xanthosine 5'-monophosphate), with the release of PPi. To a lesser extent, also acts on hypoxanthine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>diphosphate + GMP = 5-phospho-alpha-D-ribose 1-diphosphate + guanine</text>
            <dbReference type="Rhea" id="RHEA:25424"/>
            <dbReference type="ChEBI" id="CHEBI:16235"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:58017"/>
            <dbReference type="ChEBI" id="CHEBI:58115"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>diphosphate + IMP = 5-phospho-alpha-D-ribose 1-diphosphate + hypoxanthine</text>
            <dbReference type="Rhea" id="RHEA:17973"/>
            <dbReference type="ChEBI" id="CHEBI:17368"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:58017"/>
            <dbReference type="ChEBI" id="CHEBI:58053"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>diphosphate + XMP = 5-phospho-alpha-D-ribose 1-diphosphate + xanthine</text>
            <dbReference type="Rhea" id="RHEA:10800"/>
            <dbReference type="ChEBI" id="CHEBI:17712"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57464"/>
            <dbReference type="ChEBI" id="CHEBI:58017"/>
            <dbReference type="EC" id="2.4.2.22"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="3">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="3">Purine metabolism; GMP biosynthesis via salvage pathway; GMP from guanine: step 1/1.</text>
    </comment>
    <comment type="pathway">
        <text evidence="3">Purine metabolism; XMP biosynthesis via salvage pathway; XMP from xanthine: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">Homotetramer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cell membrane</location>
            <topology evidence="3">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the purine/pyrimidine phosphoribosyltransferase family. XGPT subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.4.2.22" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67652.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040450773.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01467"/>
    <dbReference type="EnsemblBacteria" id="CTQ67652">
        <property type="protein sequence ID" value="CTQ67652"/>
        <property type="gene ID" value="LAX5112_01467"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00602">
        <property type="reaction ID" value="UER00658"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00909">
        <property type="reaction ID" value="UER00887"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052657">
        <property type="term" value="F:guanine phosphoribosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004422">
        <property type="term" value="F:hypoxanthine phosphoribosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000310">
        <property type="term" value="F:xanthine phosphoribosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032263">
        <property type="term" value="P:GMP salvage"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006166">
        <property type="term" value="P:purine ribonucleoside salvage"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032265">
        <property type="term" value="P:XMP salvage"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd06223">
        <property type="entry name" value="PRTases_typeI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2020">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01903">
        <property type="entry name" value="XGPRT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000836">
        <property type="entry name" value="PRibTrfase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029057">
        <property type="entry name" value="PRTase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023747">
        <property type="entry name" value="Xanthine_Guanine_PRibTrfase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR39563">
        <property type="entry name" value="PTHR39563"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00156">
        <property type="entry name" value="Pribosyltran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53271">
        <property type="entry name" value="SSF53271"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="3 5" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="3" id="KW-0460">Magnesium</keyword>
    <keyword evidence="2 3" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3" id="KW-0660">Purine salvage</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Pribosyltran" evidence="4">
        <location>
            <begin position="18"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="region of interest" description="5-phospho-alpha-D-ribose 1-diphosphate binding" evidence="3">
        <location>
            <begin position="42"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="region of interest" description="5-phospho-alpha-D-ribose 1-diphosphate binding" evidence="3">
        <location>
            <begin position="102"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="103"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="106"/>
            <end position="110"/>
        </location>
        <ligand>
            <name>GMP</name>
            <dbReference type="ChEBI" id="CHEBI:58115"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="106"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="148"/>
            <end position="149"/>
        </location>
        <ligand>
            <name>GMP</name>
            <dbReference type="ChEBI" id="CHEBI:58115"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="149"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01903"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00156"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ67652.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="169" mass="18812" checksum="3B932964217AB709" modified="2015-12-09" version="1">MENPAQDKAFPVSWDMFHRDSRALAWRLSSVGEWKAIVCITRGGLVPAGIVARELGIRTIETVCIASYHDYDSQGRLDVIKPVDPKVIDLDDGEGSGVLVIDDLVDTGKTMKVVREMLPKAHFATVYAKPVGVPMVDTFITEVSQDTWIYFPWDMGWQFQPPLSKDTAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A046</accession>
    <name>A0A0M7A046_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Succinoglycan biosynthesis protein ExoI</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">exoI</name>
        <name evidence="3" type="ORF">LAX5112_01542</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67846.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01542"/>
    <dbReference type="EnsemblBacteria" id="CTQ67846">
        <property type="protein sequence ID" value="CTQ67846"/>
        <property type="gene ID" value="LAX5112_01542"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.90">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035437">
        <property type="entry name" value="SNase_OB-fold_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016071">
        <property type="entry name" value="Staphylococal_nuclease_OB-fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00565">
        <property type="entry name" value="SNase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00318">
        <property type="entry name" value="SNc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50199">
        <property type="entry name" value="SSF50199"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50830">
        <property type="entry name" value="TNASE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809373" evidence="1">
        <location>
            <begin position="32"/>
            <end position="226"/>
        </location>
    </feature>
    <feature type="domain" description="TNase-like" evidence="2">
        <location>
            <begin position="27"/>
            <end position="151"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50830"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ67846.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="226" mass="25022" checksum="5173700BB4712FD7" modified="2015-12-09" version="1">MGSVFHGTLKPVLWLFAFTIIAASQPQQVQAADVRVVDGDTLVLNGERVRLEGIDAPELAQTCLTSSGKSYRCGLTAKEHLQSLIMQGDVTCRGDETDAYDRKLATCFSGRKNLNQAMVADGQAYAFLRYSDAYRTEQEMARLNGEGLWAGIAEAPWDFRQQKWQVAGSKAPEGCPIKGNISARGRIYHTPWSPHYSRTRINKAAGERWFCSEEEAVAAGWRSPMS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="32" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0L3</accession>
    <name>A0A0M7A0L3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">ATP:glutamine synthetase adenylyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="3">ATase</fullName>
        </alternativeName>
        <domain>
            <recommendedName>
                <fullName evidence="3">Glutamine synthetase adenylyl-L-tyrosine phosphorylase</fullName>
                <ecNumber evidence="3">2.7.7.89</ecNumber>
            </recommendedName>
            <alternativeName>
                <fullName evidence="3">Adenylyl removase</fullName>
                <shortName evidence="3">AR</shortName>
                <shortName evidence="3">AT-N</shortName>
            </alternativeName>
        </domain>
        <domain>
            <recommendedName>
                <fullName evidence="3">Glutamine synthetase adenylyl transferase</fullName>
                <ecNumber evidence="3">2.7.7.42</ecNumber>
            </recommendedName>
            <alternativeName>
                <fullName evidence="3">Adenylyl transferase</fullName>
                <shortName evidence="3">AT</shortName>
                <shortName evidence="3">AT-C</shortName>
            </alternativeName>
        </domain>
    </protein>
    <gene>
        <name evidence="3 6" type="primary">glnE</name>
        <name evidence="6" type="ORF">LAX5112_01352</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>[glutamine synthetase]-L-tyrosine + ATP = [glutamine synthetase]-O(4)-(5'-adenylyl)-L-tyrosine + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:18589"/>
            <dbReference type="Rhea" id="RHEA-COMP:10660"/>
            <dbReference type="Rhea" id="RHEA-COMP:10661"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:46858"/>
            <dbReference type="ChEBI" id="CHEBI:83624"/>
            <dbReference type="EC" id="2.7.7.42"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>[glutamine synthetase]-O(4)-(5'-adenylyl)-L-tyrosine + phosphate = [glutamine synthetase]-L-tyrosine + ADP</text>
            <dbReference type="Rhea" id="RHEA:43716"/>
            <dbReference type="Rhea" id="RHEA-COMP:10660"/>
            <dbReference type="Rhea" id="RHEA-COMP:10661"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:46858"/>
            <dbReference type="ChEBI" id="CHEBI:83624"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.7.89"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="3">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the GlnE family.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.89" evidence="3"/>
    <dbReference type="EC" id="2.7.7.42" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67363.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01352"/>
    <dbReference type="EnsemblBacteria" id="CTQ67363">
        <property type="protein sequence ID" value="CTQ67363"/>
        <property type="gene ID" value="LAX5112_01352"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008882">
        <property type="term" value="F:[glutamate-ammonia-ligase] adenylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047388">
        <property type="term" value="F:[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016874">
        <property type="term" value="F:ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008152">
        <property type="term" value="P:metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000820">
        <property type="term" value="P:regulation of glutamine family amino acid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.460.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00802">
        <property type="entry name" value="GlnE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023057">
        <property type="entry name" value="GlnE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005190">
        <property type="entry name" value="GlnE_rpt_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043519">
        <property type="entry name" value="NT_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013546">
        <property type="entry name" value="PII_UdlTrfase/GS_AdlTrfase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30621">
        <property type="entry name" value="PTHR30621"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08335">
        <property type="entry name" value="GlnD_UR_UTase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03710">
        <property type="entry name" value="GlnE"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81301">
        <property type="entry name" value="SSF81301"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0436">Ligase</keyword>
    <keyword evidence="3" id="KW-0460">Magnesium</keyword>
    <keyword evidence="3" id="KW-0511">Multifunctional enzyme</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3 6" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="GlnE" evidence="4">
        <location>
            <begin position="70"/>
            <end position="312"/>
        </location>
    </feature>
    <feature type="domain" description="GlnD_UR_UTase" evidence="5">
        <location>
            <begin position="333"/>
            <end position="474"/>
        </location>
    </feature>
    <feature type="domain" description="GlnE" evidence="4">
        <location>
            <begin position="587"/>
            <end position="825"/>
        </location>
    </feature>
    <feature type="domain" description="GlnD_UR_UTase" evidence="5">
        <location>
            <begin position="852"/>
            <end position="989"/>
        </location>
    </feature>
    <feature type="region of interest" description="Adenylyl removase" evidence="3">
        <location>
            <begin position="1"/>
            <end position="478"/>
        </location>
    </feature>
    <feature type="region of interest" description="Adenylyl transferase" evidence="3">
        <location>
            <begin position="481"/>
            <end position="1003"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00802"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF03710"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF08335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ67363.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="1003" mass="109841" checksum="71D5F932F3AA5A3B" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0Q1</accession>
    <name>A0A0M7A0Q1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ABC-type uncharacterized transport system, periplasmic component</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01528</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67810.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01528"/>
    <dbReference type="EnsemblBacteria" id="CTQ67810">
        <property type="protein sequence ID" value="CTQ67810"/>
        <property type="gene ID" value="LAX5112_01528"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007487">
        <property type="entry name" value="ABC_transpt-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35271">
        <property type="entry name" value="PTHR35271"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04392">
        <property type="entry name" value="ABC_sub_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809062" evidence="1">
        <location>
            <begin position="22"/>
            <end position="325"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67810.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="325" mass="35703" checksum="E5189CFD48EA60EF" modified="2015-12-09" version="1">MFRIIEKTLTLLLMASFLCLAFPGGGSSASDQKDIQIITWRGMTPAEQGFLSRLSELGIKAKFHHFDAGRSETNLAGFFRANRSELEKRDLIYTFGTTATNTVLNFGAGNVPVVFNIVSDPIGNNITLSMHMPTRGATGVKQSLSAEVILQLLEQVFPYETIAVLFDPREPNSTIEADKVTNVADVLEKQTLRARFIPDVEDAELHVELMRSQLEAADVVYVTSASSFVQKAYLLKQILPPNIVSVTASPALVDHGVSLAFGEAYWQRGEAAAELAAEILLDRKSPSEIPINEIKANESILFIGKTSPVADRLDLSAFPDRVKYR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0R3</accession>
    <name>A0A0M7A0R3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01378</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67413.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671182.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01378"/>
    <dbReference type="EnsemblBacteria" id="CTQ67413">
        <property type="protein sequence ID" value="CTQ67413"/>
        <property type="gene ID" value="LAX5112_01378"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025195">
        <property type="entry name" value="GTA_TIM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032876">
        <property type="entry name" value="J_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13547">
        <property type="entry name" value="GTA_TIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13550">
        <property type="entry name" value="Phage-tail_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GTA_TIM" evidence="1">
        <location>
            <begin position="421"/>
            <end position="719"/>
        </location>
    </feature>
    <feature type="domain" description="Phage-tail_3" evidence="2">
        <location>
            <begin position="781"/>
            <end position="948"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13547"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13550"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ67413.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="1295" mass="138491" checksum="D11D81BC6FD0E29B" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A155</accession>
    <name>A0A0M7A155_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 6">Flagellar basal-body rod protein FlgC</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">flgC_1</name>
        <name evidence="9" type="ORF">LAX5112_01667</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="5 6">The basal body constitutes a major portion of the flagellar organelle and consists of four rings (L,P,S, and M) mounted on a central rod. The rod consists of about 26 subunits of FlgG in the distal portion, and FlgB, FlgC and FlgF are thought to build up the proximal portion of the rod with about 6 subunits each.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 6">Bacterial flagellum basal body</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the flagella basal body rod proteins family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68186.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008193086.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01667"/>
    <dbReference type="EnsemblBacteria" id="CTQ68186">
        <property type="protein sequence ID" value="CTQ68186"/>
        <property type="gene ID" value="LAX5112_01667"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030694">
        <property type="term" value="C:bacterial-type flagellum basal body, rod"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071973">
        <property type="term" value="P:bacterial-type flagellum-dependent cell motility"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001444">
        <property type="entry name" value="Flag_bb_rod_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019776">
        <property type="entry name" value="Flagellar_basal_body_rod_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010930">
        <property type="entry name" value="Flg_bb/hook_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006299">
        <property type="entry name" value="FlgC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00460">
        <property type="entry name" value="Flg_bb_rod"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06429">
        <property type="entry name" value="Flg_bbr_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01395">
        <property type="entry name" value="FlgC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00588">
        <property type="entry name" value="FLAGELLA_BB_ROD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6" id="KW-0975">Bacterial flagellum</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Flg_bb_rod" evidence="7">
        <location>
            <begin position="10"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="domain" description="Flg_bbr_C" evidence="8">
        <location>
            <begin position="75"/>
            <end position="132"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009677"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00017941"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023143"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00025933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU362062"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00460"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF06429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ68186.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="136" mass="15254" checksum="0FF777E485946914" modified="2015-12-09" version="1">MDLMKSLFISASGLKAQNGRMRVIAENIANANSTARTPDEEPYRRKIPTFQSEFDKQLGADKVELGRIVEDKSAFKSTHMPGHPAADENGYVLQPNVSTLVESADMREAQRSYEANLNVIETTRKMLQRTIDILRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A163</accession>
    <name>A0A0M7A163_9HYPH</name>
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        <submittedName>
            <fullName evidence="5">Bacteriophytochrome cph2</fullName>
        </submittedName>
    </protein>
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        <name evidence="5" type="primary">cph2_7</name>
        <name evidence="5" type="ORF">LAX5112_01597</name>
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        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
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        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
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    </dbReference>
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        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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    </dbReference>
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    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001633">
        <property type="entry name" value="EAL_dom"/>
    </dbReference>
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    </dbReference>
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    </dbReference>
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    </dbReference>
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        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
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        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00990">
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="SSF141868"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
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    </dbReference>
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    </dbReference>
    <proteinExistence type="predicted"/>
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    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="173"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="3">
        <location>
            <begin position="197"/>
            <end position="249"/>
        </location>
    </feature>
    <feature type="domain" description="GGDEF" evidence="4">
        <location>
            <begin position="283"/>
            <end position="424"/>
        </location>
    </feature>
    <feature type="domain" description="EAL" evidence="2">
        <location>
            <begin position="433"/>
            <end position="686"/>
        </location>
    </feature>
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            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="PROSITE" id="PS50883"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="PROSITE" id="PS50887"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="EMBL" id="CTQ67990.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="699" mass="76806" checksum="F9D4CC62AC35380A" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1Q3</accession>
    <name>A0A0M7A1Q3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Gas vesicle protein GvpN</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01488</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
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            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67704.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671299.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01488"/>
    <dbReference type="EnsemblBacteria" id="CTQ67704">
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        <property type="gene ID" value="LAX5112_01488"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
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    </dbReference>
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        <property type="entry name" value="ATPase_dyneun-rel_AAA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07728">
        <property type="entry name" value="AAA_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA_5" evidence="1">
        <location>
            <begin position="42"/>
            <end position="196"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07728"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67704.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="312" mass="34990" checksum="3BA30BB1791477B3" modified="2015-12-09" version="1">MPQSAIPATIDETLQLMDEAGYVADRSLATVLHLALKMRRPLFLEGEAGVGKTEIAKVLSSTLGRDLIRLQCYEGLDIASAVYEWNYPAQMVEIRVAEASGDTEHSELSKSIFDEKFLIKRPVLQALEPSLNGAPVFLIDELDRADEAFEAFLLEVLADNQVSIPELGTIKAEEPPIVIITTNRTREIHDALKRRCLYHWVDYPDAERELEIVHRKVPGASERLAGEVVAFVQKLRTEEDLFKQPGVAETLDWATALSELNEIALDPDMASDTLGVLLKYQDDIERVRGSKVRQMIDDIRKDEPRPQSMPAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2Z0</accession>
    <name>A0A0M7A2Z0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">(2R)-sulfolactate sulfo-lyase subunit alpha</fullName>
            <ecNumber evidence="1">4.4.1.24</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">suyA</name>
        <name evidence="1" type="ORF">LAX5112_02110</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="4.4.1.24" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69428.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008197157.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02110"/>
    <dbReference type="EnsemblBacteria" id="CTQ69428">
        <property type="protein sequence ID" value="CTQ69428"/>
        <property type="gene ID" value="LAX5112_02110"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034010">
        <property type="term" value="F:sulfolactate sulfo-lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd11613">
        <property type="entry name" value="SAF_AH_GD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044144">
        <property type="entry name" value="UxaA/GarD_SAF"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0456">Lyase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ69428.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="96" mass="10319" checksum="CE9A90BB55A605A2" modified="2015-12-09" version="1">MSEIPHLLVHEHADNVGVVVVEGLTAGTDMLCCVTHDNSTFRLTAGADVPIGHKIALKDLADGDTAIKYGEDIGKIIAEIPKGAHVHTHNCKTKRW</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3Y9</accession>
    <name>A0A0M7A3Y9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">PAP2 (Acid phosphatase) superfamily protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02241</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69768.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671869.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02241"/>
    <dbReference type="EnsemblBacteria" id="CTQ69768">
        <property type="protein sequence ID" value="CTQ69768"/>
        <property type="gene ID" value="LAX5112_02241"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036938">
        <property type="entry name" value="P_Acid_Pase_2/haloperoxi_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000326">
        <property type="entry name" value="P_Acid_Pase_2/haloperoxidase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01569">
        <property type="entry name" value="PAP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48317">
        <property type="entry name" value="SSF48317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="18"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="79"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="110"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="166"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="191"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="220"/>
            <end position="238"/>
        </location>
    </feature>
    <feature type="domain" description="acidPPc" evidence="2">
        <location>
            <begin position="116"/>
            <end position="237"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01569"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ69768.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="285" mass="31954" checksum="9AAAB4C0B0F32459" modified="2015-12-09" version="1">MIDTPLTKHIQNIASSKAVAWCIAHPFLATIAYVALVSAFFLAFPQTDLWVSGLFFSQTDGFWAQHNPFLQKVRHLGPYLVQTIAICSVAILVIKLLLPGRPPIVPLRKPVFLISTLILGPGILVNSILKDNWGRPRPRSIEEFGGELPFQPVWKMTDFCERNCSFTSGEGAAGIWLVTMAFLVPASWRKAVLAFVLPLCLILSINRVAFGGHFFSDTMLSWGLTLLVILSVYWLLYLKKPPLMTDQGLDEWFTRNGRRLHRLVKRLLVRLRQALRGAGSAQSES</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4I1</accession>
    <name>A0A0M7A4I1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Neu5Ac permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">siaT_13</name>
        <name evidence="3" type="ORF">LAX5112_01815</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68633.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01815"/>
    <dbReference type="EnsemblBacteria" id="CTQ68633">
        <property type="protein sequence ID" value="CTQ68633"/>
        <property type="gene ID" value="LAX5112_01815"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010656">
        <property type="entry name" value="DctM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011853">
        <property type="entry name" value="TRAP_DctM-Dct_fused"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06808">
        <property type="entry name" value="DctM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02123">
        <property type="entry name" value="TRAP_fused"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="44"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="68"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="91"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="119"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="165"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="290"/>
            <end position="312"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="332"/>
            <end position="352"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="359"/>
            <end position="380"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="400"/>
            <end position="424"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="436"/>
            <end position="454"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="485"/>
            <end position="512"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="518"/>
            <end position="538"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="550"/>
            <end position="571"/>
        </location>
    </feature>
    <feature type="domain" description="DctM" evidence="2">
        <location>
            <begin position="107"/>
            <end position="546"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF06808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ68633.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="595" mass="61552" checksum="DA89BD5D2CDAAE63" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4T0</accession>
    <name>A0A0M7A4T0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02351</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70088.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671972.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70088">
        <property type="protein sequence ID" value="CTQ70088"/>
        <property type="gene ID" value="LAX5112_02351"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ70088.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="75" mass="8540" checksum="022BD2776C23681A" modified="2015-12-09" version="1">MNGVLIALHLVACQPNLLICEDLSASREYWEDMDACQIAREPEMDRARENLPDETVVMSRCRYTIAPDARTAPIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A543</accession>
    <name>A0A0M7A543_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Chemotaxis protein CheY</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">cheY_2</name>
        <name evidence="3" type="ORF">LAX5112_02323</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70019.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_006935666.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02323"/>
    <dbReference type="EnsemblBacteria" id="CTQ70019">
        <property type="protein sequence ID" value="CTQ70019"/>
        <property type="gene ID" value="LAX5112_02323"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="2">
        <location>
            <begin position="8"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="1">
        <location>
            <position position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ70019.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="127" mass="14273" checksum="E2E57B6AB9FA9968" modified="2015-12-09" version="1">MALDLQMPVLVVDDYKTMIRIIRNLLKQLGFEDIDDAADGTEALEKMKQRRYGLVISDWNMEPMTGYELLKQVRADGSLSKTPFIMVTAESKTENVIAAKKAGVNNYIVKPFNAQTLKGKIEAVFSD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5B0</accession>
    <name>A0A0M7A5B0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative L-galactonate oxidoreductase</fullName>
            <ecNumber evidence="3">1.1.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yjjN_1</name>
        <name evidence="3" type="ORF">LAX5112_02111</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.1.1.-" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69430.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671773.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02111"/>
    <dbReference type="EnsemblBacteria" id="CTQ69430">
        <property type="protein sequence ID" value="CTQ69430"/>
        <property type="gene ID" value="LAX5112_02111"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013149">
        <property type="entry name" value="ADH-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013154">
        <property type="entry name" value="ADH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011032">
        <property type="entry name" value="GroES-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08240">
        <property type="entry name" value="ADH_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00107">
        <property type="entry name" value="ADH_zinc_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50129">
        <property type="entry name" value="SSF50129"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ADH_N" evidence="2">
        <location>
            <begin position="25"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="domain" description="ADH_zinc_N" evidence="1">
        <location>
            <begin position="171"/>
            <end position="287"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00107"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF08240"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ69430.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="331" mass="34943" checksum="C88E390E0813F649" modified="2015-12-09" version="1">MKALVYTGPETQAYRDVADPTPSASDALIKVAHTGICGSDMHAFLGHDERRPAPLILGHEVAGTVVSGPLEGKTVTVNPLVTCGTCEACRSDRDNLCPDRQIISMPPREGGFADYLAMPEGNLVVVPDNITDAQAALAEPIACGWHAVRLAKRALMSDPAKARALVIGGGAIGLGAALSLKAQGIQHVRLVEPNQERAQFLKSSCGIEVLTPDQAETSGQYDLIVDGVGYAATRATATKLAKPGGVISHIGLGSSDGGLDIRRMTLQEITFIGTYTYTAEDFRETAKAMFDGRLGALDWSEIRPLSDGLKAFNDLRKGAVAVPKILLTPDT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5J6</accession>
    <name>A0A0M7A5J6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Haloalkane dehalogenase</fullName>
            <ecNumber evidence="3">3.8.1.5</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">dhmA</name>
        <name evidence="3" type="ORF">LAX5112_01965</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.8.1.5" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ69003.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671646.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01965"/>
    <dbReference type="EnsemblBacteria" id="CTQ69003">
        <property type="protein sequence ID" value="CTQ69003"/>
        <property type="gene ID" value="LAX5112_01965"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018786">
        <property type="term" value="F:haloalkane dehalogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000073">
        <property type="entry name" value="AB_hydrolase_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00561">
        <property type="entry name" value="Abhydrolase_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00111">
        <property type="entry name" value="ABHYDROLASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809282" evidence="1">
        <location>
            <begin position="27"/>
            <end position="319"/>
        </location>
    </feature>
    <feature type="domain" description="AB hydrolase-1" evidence="2">
        <location>
            <begin position="58"/>
            <end position="300"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00561"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ69003.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="319" mass="35927" checksum="A2CEA5420AE48741" modified="2015-12-09" version="1">MSLITRTLSAALLAAALTTPIASSNASEHASAFETKFGYETIDGLRIAYREAGDPDNPTVLLLHGFPTSSHMFRNLIPGLAADYHVIAPDFQGFGASDMPSADTYDYTFDNLAGTVEELLERKNIENYALYLMDYGAPVGYRLFADAPDKVTGFIIQNGNAYEEGLPEFWDPIRAYWADPSEENAAPLRAFLGIEGTKWQFTHGTRNPDAISPDNYWHVQYLLDRPGNAEVQLELFYDYRTNLTLYPEWQALFREHQPPALVVWGKNDQIFPAEGAHPYRQDLTNVEFNLLDTGHFALEEDGAFIAEEIRDFLEREVNP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5R6</accession>
    <name>A0A0M7A5R6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Chorismate mutase</fullName>
            <ecNumber evidence="1">5.4.99.5</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">pchB</name>
        <name evidence="3" type="ORF">LAX5112_02425</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="5.4.99.5" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70239.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02425"/>
    <dbReference type="EnsemblBacteria" id="CTQ70239">
        <property type="protein sequence ID" value="CTQ70239"/>
        <property type="gene ID" value="LAX5112_02425"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004106">
        <property type="term" value="F:chorismate mutase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046417">
        <property type="term" value="P:chorismate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.59.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036263">
        <property type="entry name" value="Chorismate_II_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036979">
        <property type="entry name" value="CM_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002701">
        <property type="entry name" value="CM_II_prokaryot"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01817">
        <property type="entry name" value="CM_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00830">
        <property type="entry name" value="CM_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48600">
        <property type="entry name" value="SSF48600"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51168">
        <property type="entry name" value="CHORISMATE_MUT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Chorismate mutase" evidence="2">
        <location>
            <begin position="21"/>
            <end position="111"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012404"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51168"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ70239.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="131" mass="15158" checksum="E1783815D24D4C67" modified="2015-12-09" version="1">MTAGRFFVFAKQERMTDIKRPADCHTKADIRTAIDALDQDLLKLFAQRQGYVRRMAELKQHPDEAFDHDRIETMVAALKNRAEDLGLEADQAEQVWRVLIDWNVAYEKRAIAARLEKGQAPNTSWVSKETR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5Y9</accession>
    <name>A0A0M7A5Y9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Methyl-accepting chemotaxis protein 4</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">mcp4_9</name>
        <name evidence="10" type="ORF">LAX5112_02326</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="3">Belongs to the methyl-accepting chemotaxis (MCP) protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70027.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671952.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02326"/>
    <dbReference type="EnsemblBacteria" id="CTQ70027">
        <property type="protein sequence ID" value="CTQ70027"/>
        <property type="gene ID" value="LAX5112_02326"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004888">
        <property type="term" value="F:transmembrane signaling receptor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006935">
        <property type="term" value="P:chemotaxis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004090">
        <property type="entry name" value="Chemotax_Me-accpt_rcpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032255">
        <property type="entry name" value="HBM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004089">
        <property type="entry name" value="MCPsignal_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000727">
        <property type="entry name" value="T_SNARE_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00015">
        <property type="entry name" value="MCPsignal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00260">
        <property type="entry name" value="CHEMTRNSDUCR"/>
    </dbReference>
    <dbReference type="SMART" id="SM01358">
        <property type="entry name" value="HBM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00283">
        <property type="entry name" value="MA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50111">
        <property type="entry name" value="CHEMOTAXIS_TRANSDUC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51753">
        <property type="entry name" value="HBM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50192">
        <property type="entry name" value="T_SNARE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4" id="KW-0807">Transducer</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="299"/>
            <end position="320"/>
        </location>
    </feature>
    <feature type="domain" description="HBM" evidence="9">
        <location>
            <begin position="47"/>
            <end position="287"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="8">
        <location>
            <begin position="321"/>
            <end position="374"/>
        </location>
    </feature>
    <feature type="domain" description="Methyl-accepting transducer" evidence="6">
        <location>
            <begin position="497"/>
            <end position="726"/>
        </location>
    </feature>
    <feature type="domain" description="T-SNARE coiled-coil homology" evidence="7">
        <location>
            <begin position="656"/>
            <end position="718"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023224"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00029447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51753"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ70027.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="760" mass="81268" checksum="2DA957FB59BBF39F" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A641</accession>
    <name>A0A0M7A641_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Putative RNA polymerase sigma factor FecI</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">fecI</name>
        <name evidence="4" type="ORF">LAX5112_02021</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="1">Interacts transiently with the RNA polymerase catalytic core formed by RpoA, RpoB, RpoC and RpoZ (2 alpha, 1 beta, 1 beta' and 1 omega subunit) to form the RNA polymerase holoenzyme that can initiate transcription.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69203.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671714.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02021"/>
    <dbReference type="EnsemblBacteria" id="CTQ69203">
        <property type="protein sequence ID" value="CTQ69203"/>
        <property type="gene ID" value="LAX5112_02021"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016987">
        <property type="term" value="F:sigma factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006352">
        <property type="term" value="P:DNA-templated transcription, initiation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050896">
        <property type="term" value="P:response to stimulus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032710">
        <property type="entry name" value="NTF2-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014284">
        <property type="entry name" value="RNA_pol_sigma-70_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007627">
        <property type="entry name" value="RNA_pol_sigma70_r2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013249">
        <property type="entry name" value="RNA_pol_sigma70_r4_t2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013325">
        <property type="entry name" value="RNA_pol_sigma_r2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013324">
        <property type="entry name" value="RNA_pol_sigma_r3/r4-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04542">
        <property type="entry name" value="Sigma70_r2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08281">
        <property type="entry name" value="Sigma70_r4_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54427">
        <property type="entry name" value="SSF54427"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88659">
        <property type="entry name" value="SSF88659"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88946">
        <property type="entry name" value="SSF88946"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02937">
        <property type="entry name" value="sigma70-ECF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Sigma70_r2" evidence="2">
        <location>
            <begin position="10"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="domain" description="Sigma70_r4_2" evidence="3">
        <location>
            <begin position="109"/>
            <end position="157"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00011344"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF04542"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF08281"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ69203.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="307" mass="33575" checksum="9B978695280CF3E6" modified="2015-12-09" version="1">MSEQSKLETFEQARPRLLGLAYRLLGTWADAEDAVQDTFLRWQSTDGAAILNPDGWLTTACTNRCLDLLRSAHNKRVDYVGPWIPEPLHIEAGETPEGDIERAESLTIAFLHMMERLSPKERAAFLLHSVFGQSHRQVAGVLGMSESASRQLVSRASRNVQGPNARFIPAADHQEKMLTAFLDAVTSGSTEQLAGLLSESVQFQSDGGGKVTALGRVLSGSVDVSKYVAKIMSRLWTGSGGTLERRVINGIEGLAFYEAEHLVSVVTFGYSADGMIDQIFIMRNPDKLRGMTQSIRHDTGSGALQPN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6V7</accession>
    <name>A0A0M7A6V7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Methyl-accepting chemotaxis protein 4</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">mcp4_8</name>
        <name evidence="10" type="ORF">LAX5112_02305</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the methyl-accepting chemotaxis (MCP) protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ69970.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451535.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ69970">
        <property type="protein sequence ID" value="CTQ69970"/>
        <property type="gene ID" value="LAX5112_02305"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024478">
        <property type="entry name" value="HlyB_4HB_MCP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004089">
        <property type="entry name" value="MCPsignal_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000727">
        <property type="entry name" value="T_SNARE_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12729">
        <property type="entry name" value="4HB_MCP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00015">
        <property type="entry name" value="MCPsignal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00283">
        <property type="entry name" value="MA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50111">
        <property type="entry name" value="CHEMOTAXIS_TRANSDUC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50192">
        <property type="entry name" value="T_SNARE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="6" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 3" id="KW-0807">Transducer</keyword>
    <keyword evidence="6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="14"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="195"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="9">
        <location>
            <begin position="216"/>
            <end position="269"/>
        </location>
    </feature>
    <feature type="domain" description="Methyl-accepting transducer" evidence="7">
        <location>
            <begin position="292"/>
            <end position="539"/>
        </location>
    </feature>
    <feature type="domain" description="T-SNARE coiled-coil homology" evidence="8">
        <location>
            <begin position="462"/>
            <end position="524"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="311"/>
            <end position="350"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="4">
        <location>
            <begin position="265"/>
            <end position="292"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023224"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00029447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ69970.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="566" mass="59872" checksum="FBE3E777AA931FD5" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A765</accession>
    <name>A0A0M7A765_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02513</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70451.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672089.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70451">
        <property type="protein sequence ID" value="CTQ70451"/>
        <property type="gene ID" value="LAX5112_02513"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="28"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="54"/>
            <end position="74"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70451.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="98" mass="10532" checksum="0144C0CF03111CE3" modified="2015-12-09" version="1">MLTSHTVSPLRRRFAFDRLQQNASPRSLFMLACCLMMAAGMAIVLASAPAGASFAGRFWPVLPLAGCLAMHLVMHRFMGGCVHQGSGDNRTHGDKSNA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7B3</accession>
    <name>A0A0M7A7B3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02674</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70978.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040450836.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02674"/>
    <dbReference type="EnsemblBacteria" id="CTQ70978">
        <property type="protein sequence ID" value="CTQ70978"/>
        <property type="gene ID" value="LAX5112_02674"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809492" evidence="1">
        <location>
            <begin position="24"/>
            <end position="194"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70978.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="194" mass="21871" checksum="F12B16A263FB66EA" modified="2015-12-09" version="1">MRRTFWSAVTALMFCPFALNTAAAGGYASSCYEQAVVPAVYKTVNQRVLVQAASSYVVQQPAKYAYQTRQVLVQPERVTYRTSPAVYQTQHHKVQVKPASSGWEYRTIKGRRILCKVHYPAVYQTASQRVLVKPASKVAVRHPAVYSHVKEKVLIQPASSHRVQKPAIYQTVSRNVLVQPARTVWQPIRAKGCR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7Z6</accession>
    <name>A0A0M7A7Z6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Na/Pi-cotransporter II-related protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">LAX5112_02595</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70741.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672180.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02595"/>
    <dbReference type="EnsemblBacteria" id="CTQ70741">
        <property type="protein sequence ID" value="CTQ70741"/>
        <property type="gene ID" value="LAX5112_02595"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015114">
        <property type="term" value="F:phosphate ion transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005436">
        <property type="term" value="F:sodium:phosphate symporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044341">
        <property type="term" value="P:sodium-dependent phosphate transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003841">
        <property type="entry name" value="Na/Pi_transpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030147">
        <property type="entry name" value="NptA-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10010">
        <property type="entry name" value="PTHR10010"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10010:SF46">
        <property type="entry name" value="PTHR10010:SF46"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02690">
        <property type="entry name" value="Na_Pi_cotrans"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="6"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="47"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="83"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="110"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="134"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="179"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="215"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="248"/>
            <end position="268"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="280"/>
            <end position="300"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ70741.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="538" mass="57905" checksum="74701AE8F1BD159F" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8Y2</accession>
    <name>A0A0M7A8Y2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Tim44-like domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_02577</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70690.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02577"/>
    <dbReference type="EnsemblBacteria" id="CTQ70690">
        <property type="protein sequence ID" value="CTQ70690"/>
        <property type="gene ID" value="LAX5112_02577"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032710">
        <property type="entry name" value="NTF2-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007379">
        <property type="entry name" value="Tim44-like_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04280">
        <property type="entry name" value="Tim44"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00978">
        <property type="entry name" value="Tim44"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54427">
        <property type="entry name" value="SSF54427"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="155"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="183"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="domain" description="Tim44" evidence="3">
        <location>
            <begin position="252"/>
            <end position="395"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="104"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="214"/>
            <end position="260"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="107"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="227"/>
            <end position="260"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00978"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ70690.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="397" mass="41636" checksum="267BCCADC08729A2" modified="2015-12-09" version="1">MIPALFCFLSPTYGFPRCIFLACLNLNFLCFRHKGSLSLLAIDAEIPTSAATGQNGPQKETKMPAAARRLRKTTAFMIVAIATMFAATDYAEARKGGFGGFGSRGSKTYSAPPTTKTAPETAAPVQRSMTPQPAQTQRTTPGAGGQAANAQRPGLFGGFGGALLGGLVLGGLVGMLFGGGLGGFAGFLGLILQVGLIVLLVSLAMRFFRSRQQPATAGPNPFERAPNQPAPDQNASQATPFSFGAGGASGSTSQTFDQPATQPYEATAADLDRFEDMLSEVQSAYASEDYAALRQLATPEAMSYLAEELGELASAGKKNVVSDVKLLQGDVAEAWHENGNDYVTVAMRYSAVDYIAKRDSHEVISGDPDAPSESTEVWTFVRSSGGDWLLSAIQGTG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9G3</accession>
    <name>A0A0M7A9G3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02438</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70264.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672133.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70264">
        <property type="protein sequence ID" value="CTQ70264"/>
        <property type="gene ID" value="LAX5112_02438"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="45"/>
            <end position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70264.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="105" mass="11010" checksum="F653EEC88AFD958B" modified="2015-12-09" version="1">MPKFLLVYHGKPDIQSREDGVNHMQAWKAWSASIAEAVIDPGLPVGPSKTITPDGVEDHGGANPASGMTVLQADTMEDAIALAKGCPHLSGTGTIEIAEALDMEM</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAF2</accession>
    <name>A0A0M7AAF2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02878</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71597.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672394.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ71597">
        <property type="protein sequence ID" value="CTQ71597"/>
        <property type="gene ID" value="LAX5112_02878"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809359" evidence="1">
        <location>
            <begin position="24"/>
            <end position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71597.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="77" mass="8130" checksum="8943C2A57506A282" modified="2015-12-09" version="1">MRLLTTGIAALAVSTFALAPAHACSWGKTAKAKDMTVAETIVAPEIDTDISIATNDLSDQVLQEMTVPEVETEEPAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAT2</accession>
    <name>A0A0M7AAT2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">N-acetylmuramoyl-L-alanine amidase AmiD</fullName>
            <ecNumber evidence="3">3.5.1.28</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">amiD</name>
        <name evidence="3" type="ORF">LAX5112_02589</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.5.1.28" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70724.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672298.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02589"/>
    <dbReference type="EnsemblBacteria" id="CTQ70724">
        <property type="protein sequence ID" value="CTQ70724"/>
        <property type="gene ID" value="LAX5112_02589"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008745">
        <property type="term" value="F:N-acetylmuramoyl-L-alanine amidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009253">
        <property type="term" value="P:peptidoglycan catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06583">
        <property type="entry name" value="PGRP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.101.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.80.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036505">
        <property type="entry name" value="Amidase/PGRP_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002502">
        <property type="entry name" value="Amidase_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002477">
        <property type="entry name" value="Peptidoglycan-bd-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036365">
        <property type="entry name" value="PGBD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036366">
        <property type="entry name" value="PGBDSf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01510">
        <property type="entry name" value="Amidase_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01471">
        <property type="entry name" value="PG_binding_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00644">
        <property type="entry name" value="Ami_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47090">
        <property type="entry name" value="SSF47090"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55846">
        <property type="entry name" value="SSF55846"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="N-acetylmuramoyl-L-alanine amidase" evidence="2">
        <location>
            <begin position="16"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00644"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ70724.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="253" mass="28142" checksum="372B73D763C3AD2C" modified="2015-12-09" version="1">MSVATDTGVKARVHPSPNHGERAAEAPIDMLILHYTGMQTGEEALQRLCDPRSEVSAHYVVQEDGSILQCVPEARRAWHAGKSFWKGERDINSRSIGVELVNPGHEFGYRQFPKLQIEAVIALCADVCARHQIHPWMVLAHSDIAPSRKEDPGELFPWDRLAAAGVGHYVEPEPIGSGLFMQEGEEGQPVEALQSMLALYGYEVDINGRFDRCTREVVTAFQRHFRPEKVDGVVDASTIETLHNLLSKLPSLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AB82</accession>
    <name>A0A0M7AB82_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Cyclopropane mycolic acid synthase 1</fullName>
            <ecNumber evidence="2">2.1.1.79</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">cmaA1</name>
        <name evidence="2" type="ORF">LAX5112_02913</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the CFA/CMAS family.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.79" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71702.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ71702">
        <property type="protein sequence ID" value="CTQ71702"/>
        <property type="gene ID" value="LAX5112_02913"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008825">
        <property type="term" value="F:cyclopropane-fatty-acyl-phospholipid synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008610">
        <property type="term" value="P:lipid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003333">
        <property type="entry name" value="Mycolic_cyclopropane_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF003085">
        <property type="entry name" value="CMAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010815"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71702.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="432" mass="49101" checksum="87A1ED8917503BFB" modified="2015-12-09" version="1">MDAVVDRNMQVTKDLLAHVHDALGADFSFELPDGTVIPENGQESELRLFISGTAIPALLRRPSLKTVLELYARGEVEPRGGSLFDFADKRPSVKSKTLLKRLNKRLVVGSAVKLFFAPRASEKQQAQLDGGNTAQQSGSGQTDIAFHYNVSNEFYRLFLDPEMLYTCAYFKTWDTDLATAQRDKLEMICRKLRLKPGDRMLDIGCGWGALICYAAEHYGVTATGVTLSEEQIVLARERIKTKGLEGKVAVELKDFREMEGEFDKISSIGMFEHVGLDHHEEYYQAVHRLLRPRGIYLHHAITRRGKKSLKNFRRKRAEYKALVRYIFPGGEVDHIGWTLTNLESYGFEVHDVEGWREHYARTTRLWAENLMRAKEAAVAEVGDEKYRLWLAYLTGVSLGFQRGTVNIFQTVSTKRTKGPSLMPPTREDLYLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABS9</accession>
    <name>A0A0M7ABS9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative xanthine dehydrogenase subunit A</fullName>
            <ecNumber evidence="2">1.17.1.4</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">pucA_2</name>
        <name evidence="2" type="ORF">LAX5112_02899</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.17.1.4" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71660.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672409.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02899"/>
    <dbReference type="EnsemblBacteria" id="CTQ71660">
        <property type="protein sequence ID" value="CTQ71660"/>
        <property type="gene ID" value="LAX5112_02899"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004854">
        <property type="term" value="F:xanthine dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027051">
        <property type="entry name" value="XdhC_Rossmann_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13478">
        <property type="entry name" value="XdhC_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="XdhC_C" evidence="1">
        <location>
            <begin position="78"/>
            <end position="218"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71660.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="231" mass="24761" checksum="A80697EE207D8BE0" modified="2015-12-09" version="1">MDLSLLSQLNAERAARRAAILVTNMTDGSQRMIKQNVAYRNDLLAEEFDKRFLSGKSGLVKTDAGEAFLTVSVPAPRLVLIGAVHISQALVPMAEIAGFNVSVIDPRTAFATEDRFPGSSLLAEWPEDVLSDQPFDPYTAVAAVTHDPKIDDYPLMEALKTGCFYVGALGSKKTHGKRLERFREAGLSVDVMSRIEAPIGLDIGAASPQEIAVAVLASVIKALRKPGGVPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AC58</accession>
    <name>A0A0M7AC58_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Probable membrane transporter protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">LAX5112_03014</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the 4-toluene sulfonate uptake permease (TSUP) (TC 2.A.102) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72032.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03014"/>
    <dbReference type="EnsemblBacteria" id="CTQ72032">
        <property type="protein sequence ID" value="CTQ72032"/>
        <property type="gene ID" value="LAX5112_03014"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002781">
        <property type="entry name" value="TM_pro_TauE-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01925">
        <property type="entry name" value="TauE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="7"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="32"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="66"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="94"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="152"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="195"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="224"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="254"/>
            <end position="275"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363041"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ72032.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="290" mass="30517" checksum="AB804A3BFA458653" modified="2015-12-09" version="1">MGGAVGFLSGLFGIGGGFLLTPLLIFSGIPPAVSVATVTTQVVASSASAVVTYWRRKAIDLKLASVLLAGGIFGSLIGVILFDILQAIGQLDVVISLSYVTFLGTIGGLMLVESVRAMRRRRSGEPPRARKPGQHNWVHGLPLKVRFRRSKLYVSVIPVIGLGAVIGFLGTVLGIGGGFMMVPALIYLLRVPTSIVIGTSLFQILFTMAAATIFHAMGTKTVDIVLAMTLMVGGVIGAQFGARMGQNLRGDQLRLLLALLVLGVGLRFAVDLLLFPEDLYSIAIEKGAGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AC92</accession>
    <name>A0A0M7AC92_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Aminotransferase</fullName>
            <ecNumber evidence="1">2.6.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">aspC_1</name>
        <name evidence="3" type="ORF">LAX5112_03036</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.6.1.-" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72072.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672553.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03036"/>
    <dbReference type="EnsemblBacteria" id="CTQ72072">
        <property type="protein sequence ID" value="CTQ72072"/>
        <property type="gene ID" value="LAX5112_03036"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008483">
        <property type="term" value="F:transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901605">
        <property type="term" value="P:alpha-amino acid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009058">
        <property type="term" value="P:biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004839">
        <property type="entry name" value="Aminotransferase_I/II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004838">
        <property type="entry name" value="NHTrfase_class1_PyrdxlP-BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00155">
        <property type="entry name" value="Aminotran_1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00105">
        <property type="entry name" value="AA_TRANSFER_CLASS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 3" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Aminotran_1_2" evidence="2">
        <location>
            <begin position="25"/>
            <end position="370"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU000481"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ72072.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="377" mass="41222" checksum="348FC71051835038" modified="2015-12-09" version="1">MAPESGIVEVFNAGQGRDDVIPLWAGEGDLPTPQFICDAAKRSLDNGETFYTYQRGIPELRSALAGYHQRVFGKAFAPERFFVTGSGMQSIQLAIQAIASSGDEVLVPTPTWPNIEAALGIRGVKPVSVPMREVPEGWELDVNDLEASITPKTAAIFLNSPSNPTGWVASQEVLRQVLGLARKHGLWIIADEIYALFYYGEANRAPSFYDIADEDDQIIYVNSMSKNWAMTGWRIGWISAPEALGQVLENLIQYSTSGVPMFSQRAAVSALNDGHTFLEQQVGLAKEGRACVVQGLGALNRVRIAAPQGAFYLFFSIDGVEDTRKFAMDCVRDTGVGLAPGTAFGNGGENYIRLCFARQRAHLEEAIQRISVWLPEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADL5</accession>
    <name>A0A0M7ADL5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Carboxylate/amino acid/amine transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03392</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72979.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672796.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03392"/>
    <dbReference type="EnsemblBacteria" id="CTQ72979">
        <property type="protein sequence ID" value="CTQ72979"/>
        <property type="gene ID" value="LAX5112_03392"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000620">
        <property type="entry name" value="EamA_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00892">
        <property type="entry name" value="EamA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="33"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="67"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="94"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="124"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="148"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="178"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="206"/>
            <end position="227"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="234"/>
            <end position="254"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="260"/>
            <end position="278"/>
        </location>
    </feature>
    <feature type="domain" description="EamA" evidence="2">
        <location>
            <begin position="6"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="domain" description="EamA" evidence="2">
        <location>
            <begin position="148"/>
            <end position="277"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ72979.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="320" mass="34080" checksum="E755EF40045C392A" modified="2015-12-09" version="1">MSASLKGFLFALSGFAIFSTHDAIIKTLGGTYPAFQIIFFSVLFAFVPVSLIILADGKADNFRPRRPGLVLLRSSLAIVAMSGGFYAFTVLPLAEVYALLFATPLLVTALSVPLLGETVRFQRWIAVIVGLIGVVIVLRPGVSALSAGHMAALLSAGANSLSSILVRKIGGQERSAVLILYPMILMLIVMSILMPSSYQPMAVGDLGLMAAIGFLSVIAQSAIIGAYRAAPAAVVAPLQYSQILWAALFGALFFSETPDFYVALGSAIIVASGLFVVWREAQENVSARRPVTRSASFRFNTGYASSVNRTEDKDDAEMQD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADS1</accession>
    <name>A0A0M7ADS1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative allantoin catabolism protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02924</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71774.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672443.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02924"/>
    <dbReference type="EnsemblBacteria" id="CTQ71774">
        <property type="protein sequence ID" value="CTQ71774"/>
        <property type="gene ID" value="LAX5112_02924"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071522">
        <property type="term" value="F:ureidoglycine aminohydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd02212">
        <property type="entry name" value="cupin_UGlyAH_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd02211">
        <property type="entry name" value="cupin_UGlyAH_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013096">
        <property type="entry name" value="Cupin_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017627">
        <property type="entry name" value="UGHY"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044697">
        <property type="entry name" value="UGlyAH_cupin_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008579">
        <property type="entry name" value="UGlyAH_Cupin_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044704">
        <property type="entry name" value="UGlyAH_cupin_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07883">
        <property type="entry name" value="Cupin_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05899">
        <property type="entry name" value="Cupin_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03214">
        <property type="entry name" value="ura-cupin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cupin_3" evidence="1">
        <location>
            <begin position="64"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="domain" description="Cupin_2" evidence="2">
        <location>
            <begin position="196"/>
            <end position="262"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF05899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ71774.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="273" mass="30931" checksum="A3B216339E9E1BF8" modified="2015-12-09" version="1">MAVPKSYYAPTGGHPGQETLLTDRAVFTEAYAVIPRRTMRDIVTSYLPFWDETRLWVLSRPLSGFAETFSQYIMEVSPGGGSERPETDPDAEGVLFVVEGEAVLTVEGTRHDLRAGSYAFLPPETDWTFKNESTNPVRFHWVRKSYEAVDGLDFPEAFVTHEDDVAPIEMPGTEGKWATTRFVDPKDLRHDMHVNIVTFQPGAVIPFAETHVMEHGLYVLEGKAVYRLNQDWVEVEAGDYMWLRAFCPQACYAGGPGPFRYLLYKDVNRHMAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AE77</accession>
    <name>A0A0M7AE77_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Ribonuclease</fullName>
            <ecNumber evidence="2">3.1.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03020</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.-.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72043.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672510.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03020"/>
    <dbReference type="EnsemblBacteria" id="CTQ72043">
        <property type="protein sequence ID" value="CTQ72043"/>
        <property type="gene ID" value="LAX5112_03020"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.15.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001279">
        <property type="entry name" value="Metallo-B-lactamas"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036866">
        <property type="entry name" value="RibonucZ/Hydroxyglut_hydro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026360">
        <property type="entry name" value="Xnuc_lig_assoc"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00753">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56281">
        <property type="entry name" value="SSF56281"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR04122">
        <property type="entry name" value="Xnuc_lig_assoc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lactamase_B" evidence="1">
        <location>
            <begin position="17"/>
            <end position="152"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00753"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72043.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="344" mass="37255" checksum="F19E1977F8E5F8E5" modified="2015-12-09" version="1">MSALLTLTPEGLYCPEAKAHIDPVRPVEKAIITHGHADHARAGHGAVLATWQTLDIMAIRYGSDFCGQAQTIGYGEQLTVGGVNVSLHPAGHVLGSAQVLLAAQGERTVVSGDYKRQADLTCAPFELVPCDTFVTEATFGLPVFRHPPAQQEVAKLLTSLELFSAQTHLVGAYALGKAQRVIAELRAAGYSRTIYLHGALEKLCAYYQTQGVDLGPLELVGRRGKELQGEIVMCPPGQLSDRWSRRFGDPVAAMASGWMRVRARARQRGAELPLILSDHADWDDLCRTILETGAERIWVTHGAEEALVHWCELNGRKARPLNMIGYDDGEGADDTQLDAVGDAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AE84</accession>
    <name>A0A0M7AE84_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">HTH-type transcriptional activator HxlR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">hxlR_3</name>
        <name evidence="2" type="ORF">LAX5112_03377</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72941.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008196291.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72941">
        <property type="protein sequence ID" value="CTQ72941"/>
        <property type="gene ID" value="LAX5112_03377"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002577">
        <property type="entry name" value="HTH_HxlR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01638">
        <property type="entry name" value="HxlR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51118">
        <property type="entry name" value="HTH_HXLR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH hxlR-type" evidence="1">
        <location>
            <begin position="12"/>
            <end position="110"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51118"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72941.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="113" mass="13260" checksum="E0B2AFE83641ED0E" modified="2015-12-09" version="1">MAQNQPIDPLFCPTETALGLIGGKWKGMILWCICRKTMRFNELHRIIPDISQRMLTKQLRELEDHKIIVRKVYPQIPPKVEYSLSTHGEALKPILDQLEDWSRSYLEQRQAES</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEA2</accession>
    <name>A0A0M7AEA2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Helix-turn-helix domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02989</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71964.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672491.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ71964">
        <property type="protein sequence ID" value="CTQ71964"/>
        <property type="gene ID" value="LAX5112_02989"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001845">
        <property type="entry name" value="HTH_ArsR_DNA-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00778">
        <property type="entry name" value="HTHARSR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00418">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50987">
        <property type="entry name" value="HTH_ARSR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH arsR-type" evidence="1">
        <location>
            <begin position="8"/>
            <end position="103"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50987"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71964.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="105" mass="11722" checksum="CB0A9559725D09AE" modified="2015-12-09" version="1">MSEKDHKLEPVDLDLGKVLTALADPHRRRVIRELARAGTGTERTCASFQLPVSKATVTHHFRVLREAGLIRQVDLGNSRATALRREEIDTRFPGLLPLIAEEISS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEC1</accession>
    <name>A0A0M7AEC1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Tellurite resistance protein TerB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02996</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71984.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02996"/>
    <dbReference type="EnsemblBacteria" id="CTQ71984">
        <property type="protein sequence ID" value="CTQ71984"/>
        <property type="gene ID" value="LAX5112_02996"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3680.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029024">
        <property type="entry name" value="TerB-like"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF158682">
        <property type="entry name" value="SSF158682"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ71984.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="139" mass="15235" checksum="3044408596B86411" modified="2015-12-09" version="1">MSGQDPISIEEALIYVMVIVAASDNSMTDNELATIGDMIKTLPVFKDYNPNNVIPAAQRCGDILQEENGLSLVLELVGDILPAKLYDTAYALAVEVAAADLHVEKEELRILQLLRDRFSLDKLTIAAIERAAIARHRTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="31" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFC7</accession>
    <name>A0A0M7AFC7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Transcriptional regulatory protein tctD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">tctD_2</name>
        <name evidence="5" type="ORF">LAX5112_03428</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73116.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008190006.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03428"/>
    <dbReference type="EnsemblBacteria" id="CTQ73116">
        <property type="protein sequence ID" value="CTQ73116"/>
        <property type="gene ID" value="LAX5112_03428"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00383">
        <property type="entry name" value="trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001867">
        <property type="entry name" value="OmpR/PhoB-type_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039420">
        <property type="entry name" value="WalR-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48111">
        <property type="entry name" value="PTHR48111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00486">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00862">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51755">
        <property type="entry name" value="OMPR_PHOB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="1" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="3">
        <location>
            <begin position="2"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="domain" description="OmpR/PhoB-type" evidence="4">
        <location>
            <begin position="124"/>
            <end position="220"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="OmpR/PhoB-type" evidence="2">
        <location>
            <begin position="124"/>
            <end position="220"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="1">
        <location>
            <position position="51"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ73116.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="222" mass="24361" checksum="9324BD81A986E414" modified="2015-12-09" version="1">MRIALVEDNVNLAKGIAYQLRDAGHSVDVLHHGDDADTFLRQETGDLVILDINLPGKSGLDLLADLRERSDPRPVILLTARSETQDRVKGLDAGADDYLVKPFEMEELAARIRALGRRNTAVSPSLVNVGPLKFDAGSMQLFDGDVALEVPRRELSLLSALIQANGRTLSKASLLDQLYGAGSETDEKVIEVYVSRLRKRLSSFDINIQVHRGIGYSLNRAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFU9</accession>
    <name>A0A0M7AFU9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Thioredoxin</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_03557</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the thioredoxin family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73507.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672927.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03557"/>
    <dbReference type="EnsemblBacteria" id="CTQ73507">
        <property type="protein sequence ID" value="CTQ73507"/>
        <property type="gene ID" value="LAX5112_03557"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015035">
        <property type="term" value="F:protein-disulfide reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005746">
        <property type="entry name" value="Thioredoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017937">
        <property type="entry name" value="Thioredoxin_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013766">
        <property type="entry name" value="Thioredoxin_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00085">
        <property type="entry name" value="Thioredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000077">
        <property type="entry name" value="Thioredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01068">
        <property type="entry name" value="thioredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00194">
        <property type="entry name" value="THIOREDOXIN_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51352">
        <property type="entry name" value="THIOREDOXIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 5" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="3 5" id="KW-0676">Redox-active center</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Thioredoxin" evidence="6">
        <location>
            <begin position="1"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="disulfide bond" description="Redox-active" evidence="5">
        <location>
            <begin position="31"/>
            <end position="34"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008987"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRNR" id="PIRNR000077"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR000077-4"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ73507.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="106" mass="11577" checksum="3631EB777756F501" modified="2015-12-09" version="1">MATTQVTDASFEADVLNSDEPVVVDFWAEWCGPCKMIAPALEEISEEMNGQVKITKLNIDENQDMAMKYGVRSIPMLILFKGGEPMATQVGAAPKGKLADWIKSAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGC2</accession>
    <name>A0A0M7AGC2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">DNA-binding transcriptional repressor AcrR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03304</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72793.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672726.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72793">
        <property type="protein sequence ID" value="CTQ72793"/>
        <property type="gene ID" value="LAX5112_03304"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041586">
        <property type="entry name" value="PsrA_TetR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036271">
        <property type="entry name" value="Tet_transcr_reg_TetR-rel_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17939">
        <property type="entry name" value="TetR_C_30"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00440">
        <property type="entry name" value="TetR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00455">
        <property type="entry name" value="HTHTETR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48498">
        <property type="entry name" value="SSF48498"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50977">
        <property type="entry name" value="HTH_TETR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH tetR-type" evidence="2">
        <location>
            <begin position="17"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="1">
        <location>
            <begin position="40"/>
            <end position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ72793.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="222" mass="24302" checksum="85378A785FE7426F" modified="2015-12-09" version="1">MTDVSAPRKRAPSKKSLETKARILDAAEDLFSKRGFDGTSIRDIAKQAGAQVALVHHHGGPKEELFHMVVARRAKPLAELRLQALEEKRSVAEREGRSKLTLREILASFVQPFLEMTLSDGAPWPAYGRLIALVSADERWRDIAAECFDPTAAVFVDEIADLLPGASRTALSAAFVFTVSGMLALTASSWRIGAVAREQEEADLAETLLDYSEAGFFKLCQS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGT1</accession>
    <name>A0A0M7AGT1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">TRAP-type C4-dicarboxylate transport system, small permease component</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">LAX5112_03762</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74109.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673083.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03762"/>
    <dbReference type="EnsemblBacteria" id="CTQ74109">
        <property type="protein sequence ID" value="CTQ74109"/>
        <property type="gene ID" value="LAX5112_03762"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007387">
        <property type="entry name" value="TRAP_DctQ"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35011">
        <property type="entry name" value="PTHR35011"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04290">
        <property type="entry name" value="DctQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="46"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="85"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="126"/>
            <end position="147"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ74109.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="164" mass="17496" checksum="574200F8023A3485" modified="2015-12-09" version="1">MTVFSKLTLALAWVSALLFVLAGGMLTFEVTARYLFVAPTIWAAELSQLSLIWGSMIAMPWILGAGRHIAVDAVTNQLGLTAQRVCQGLAMIFVAGFSAVVTWKGFGIFYDSFERGRTTGSMLDLPTWVTELAIPVGFGLLFLQALIELGKAAKGPVSLSGAGH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AI76</accession>
    <name>A0A0M7AI76_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Antibiotic biosynthesis monooxygenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03974</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74788.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673269.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74788">
        <property type="protein sequence ID" value="CTQ74788"/>
        <property type="gene ID" value="LAX5112_03974"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004497">
        <property type="term" value="F:monooxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007138">
        <property type="entry name" value="ABM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03992">
        <property type="entry name" value="ABM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0503">Monooxygenase</keyword>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809505" evidence="1">
        <location>
            <begin position="26"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="domain" description="ABM" evidence="2">
        <location>
            <begin position="33"/>
            <end position="99"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF03992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ74788.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="131" mass="14344" checksum="52D2D2282799F4E2" modified="2015-12-09" version="1">MLSKRTIRTLAIAASALSVSTQAPAQELAPKEPVTLINAFEVPADQVETTIEGWRSARAFLETQPGYIETQLHRSIMPKARFQLVNVARWESADDYIAAIQKYRESGAAGALKGTVFHAALYVPIEQEDGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AI80</accession>
    <name>A0A0M7AI80_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase</fullName>
            <ecNumber evidence="1">1.1.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">linC</name>
        <name evidence="1" type="ORF">LAX5112_03837</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.1.1.-" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74357.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673154.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03837"/>
    <dbReference type="EnsemblBacteria" id="CTQ74357">
        <property type="protein sequence ID" value="CTQ74357"/>
        <property type="gene ID" value="LAX5112_03837"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ74357.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="249" mass="25760" checksum="08F227E68E64A843" modified="2015-12-09" version="1">MLQDKTILITGASSGIGAAAVKLFAEAGANLVITARRVDRLEEVRKGVGDDADRVLIVPGDVNDPLCAKGLVEAAKDHFGRLDGAFNNAGILGDLGPVEDMRQEAWNTVLNTNLTSCFLAAKHQVPALRENGGGAIVFTSTFVGHTVGMPGMAAYAASKAGLIGLTQCLAAECGPANIRVNALLPGGTKTDMAGDDPEFLDFVNGMHALKRMAEPEEIARAAMFLLSDAGSFVTGSAMLCDGGNSISKT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIS1</accession>
    <name>A0A0M7AIS1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Porphobilinogen deaminase</fullName>
            <shortName evidence="8">PBG</shortName>
            <ecNumber evidence="8">2.5.1.61</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">Hydroxymethylbilane synthase</fullName>
            <shortName evidence="8">HMBS</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="8">Pre-uroporphyrinogen synthase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8 11" type="primary">hemC</name>
        <name evidence="11" type="ORF">LAX5112_03967</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2 8">Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 8">
            <text>H2O + 4 porphobilinogen = hydroxymethylbilane + 4 NH4(+)</text>
            <dbReference type="Rhea" id="RHEA:13185"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="ChEBI" id="CHEBI:57845"/>
            <dbReference type="ChEBI" id="CHEBI:58126"/>
            <dbReference type="EC" id="2.5.1.61"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="8">
            <name>dipyrromethane</name>
            <dbReference type="ChEBI" id="CHEBI:60342"/>
        </cofactor>
        <text evidence="8">Binds 1 dipyrromethane group covalently.</text>
    </comment>
    <comment type="pathway">
        <text evidence="3">Porphyrin-containing compound metabolism; protoporphyrin-IX biosynthesis; coproporphyrinogen-III from 5-aminolevulinate: step 2/4.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5 8">Monomer.</text>
    </comment>
    <comment type="miscellaneous">
        <text evidence="8">The porphobilinogen subunits are added to the dipyrromethane group.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4 8">Belongs to the HMBS family.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.61" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74769.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673265.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03967"/>
    <dbReference type="EnsemblBacteria" id="CTQ74769">
        <property type="protein sequence ID" value="CTQ74769"/>
        <property type="gene ID" value="LAX5112_03967"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00251">
        <property type="reaction ID" value="UER00319"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004418">
        <property type="term" value="F:hydroxymethylbilane synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018160">
        <property type="term" value="P:peptidyl-pyrromethane cofactor linkage"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006782">
        <property type="term" value="P:protoporphyrinogen IX biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00260">
        <property type="entry name" value="Porphobil_deam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000860">
        <property type="entry name" value="HemC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022419">
        <property type="entry name" value="Porphobilin_deaminase_cofac_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022417">
        <property type="entry name" value="Porphobilin_deaminase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022418">
        <property type="entry name" value="Porphobilinogen_deaminase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036803">
        <property type="entry name" value="Porphobilinogen_deaminase_C_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11557">
        <property type="entry name" value="PTHR11557"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01379">
        <property type="entry name" value="Porphobil_deam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03900">
        <property type="entry name" value="Porphobil_deamC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001438">
        <property type="entry name" value="4pyrrol_synth_OHMeBilane_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00151">
        <property type="entry name" value="PORPHBDMNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54782">
        <property type="entry name" value="SSF54782"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00212">
        <property type="entry name" value="hemC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00533">
        <property type="entry name" value="PORPHOBILINOGEN_DEAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 8" id="KW-0627">Porphyrin biosynthesis</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 8 11" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Porphobil_deam" evidence="9">
        <location>
            <begin position="6"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="domain" description="Porphobil_deamC" evidence="10">
        <location>
            <begin position="230"/>
            <end position="297"/>
        </location>
    </feature>
    <feature type="modified residue" description="S-(dipyrrolylmethanemethyl)cysteine" evidence="8">
        <location>
            <position position="244"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000416"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00002869"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004735"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00005638"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00011245"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00260"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF01379"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF03900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ74769.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="308" mass="33352" checksum="8FA93667D486951C" modified="2015-12-09" version="1">MQSNPLRIGTRGSALALAQAHETRARLMAAHDLPEDAFEIVVIKTSGDQIQDRPLSEVGGKGLFTKEIEEAMLDRRIDLAVHSSKDMPTVLPDGLALTAFLPREDVRDAFLSPKAKTLMDLPHGAVVGSSSLRRQAMIKRLRPDIEVVMYRGNLQTRLRKLAEGEVDATLLAYAGLRRLGLEEEVTSLLEIEDFLPAVGQGAICIESRESDERTLEMLQAIHDRETQIRLDAERAFLAVLDGSCRTPIGGLALLNGDELTLKGTVLKPDGSEVHDEVRSGGAADAVQIGHAAGEALKAKMGPGFLSSH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJ16</accession>
    <name>A0A0M7AJ16_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04014</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74869.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_050776157.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04014"/>
    <dbReference type="EnsemblBacteria" id="CTQ74869">
        <property type="protein sequence ID" value="CTQ74869"/>
        <property type="gene ID" value="LAX5112_04014"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038696">
        <property type="entry name" value="IalB_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010642">
        <property type="entry name" value="Invasion_prot_B"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06776">
        <property type="entry name" value="IalB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809529" evidence="1">
        <location>
            <begin position="23"/>
            <end position="168"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74869.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="168" mass="17696" checksum="7C12123768B31618" modified="2015-12-09" version="1">MKAKTLVLALAGFAASTAVAFAQTPTLLKQHRDWAAYALTSGSGKVCYALTKPTTMLPGDRNHGDVFFFVTSRPAEGVSSEPSLLVGYPFKDKSSVSVDVDGKAFTLFTNNDGAWVENAATEAQLVAAMKAGREMSVNGESSRGTRTTYKFSLSGVTAAIDTAAQACR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJ70</accession>
    <name>A0A0M7AJ70_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">LAX5112_04145</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Mitochondrion</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75205.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673398.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04145"/>
    <dbReference type="EnsemblBacteria" id="CTQ75205">
        <property type="protein sequence ID" value="CTQ75205"/>
        <property type="gene ID" value="LAX5112_04145"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12710">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003788">
        <property type="entry name" value="NDUFAF7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038375">
        <property type="entry name" value="NDUFAF7_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12049">
        <property type="entry name" value="PTHR12049"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02636">
        <property type="entry name" value="Methyltransf_28"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="4" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004173"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ75205.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="362" mass="39133" checksum="16BA2E11FFFB4288" modified="2015-12-09" version="1">MTALKEKLRQQIAAEGPITVATYMARCLGDQEYGYYTTREPFGRKGDFITAPEVSQMFGELIGAVCLKAYETLGAPSNFQLVELGPGRGTLMGDFLRMASHRPEFLEAATLNLVEISPRLRQVQTQILRNTQLQPNFRNTFQDVPDGPLIVIANEFFDALPIHQFVKTPNGWNERMVGLDASGRLEFGVGPAQLPTDSIPPAAMKAPEGSILETQPAANAVAEEIATRIAEYGGFALFIDYGYAQTGPGDTLQALYRHAYDDVLAHPGEADLTAHVNFETLATAARRAGAIPLPLLTQGTFLLQSGLLERAGALGAGKTPADQDTIRDVVERLAAPDEMGDLFKVLAIAPKGQVFAPFEPAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AK69</accession>
    <name>A0A0M7AK69_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Methyl-accepting chemotaxis protein 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">mcp2_2</name>
        <name evidence="11" type="ORF">LAX5112_03977</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the methyl-accepting chemotaxis (MCP) protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74796.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673272.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74796">
        <property type="protein sequence ID" value="CTQ74796"/>
        <property type="gene ID" value="LAX5112_03977"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033479">
        <property type="entry name" value="dCache_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004089">
        <property type="entry name" value="MCPsignal_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02743">
        <property type="entry name" value="dCache_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00015">
        <property type="entry name" value="MCPsignal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00283">
        <property type="entry name" value="MA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50111">
        <property type="entry name" value="CHEMOTAXIS_TRANSDUC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0807">Transducer</keyword>
    <keyword evidence="3 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="342"/>
            <end position="366"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="10">
        <location>
            <begin position="364"/>
            <end position="417"/>
        </location>
    </feature>
    <feature type="domain" description="Methyl-accepting transducer" evidence="9">
        <location>
            <begin position="432"/>
            <end position="682"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00029447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ74796.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="720" mass="77801" checksum="9884F151EE8C9857" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKK5</accession>
    <name>A0A0M7AKK5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">3-isopropylmalate dehydratase</fullName>
            <ecNumber evidence="6">4.2.1.33</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">leuD_2</name>
        <name evidence="13" type="ORF">LAX5112_04328</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>(2R,3S)-3-isopropylmalate = (2S)-2-isopropylmalate</text>
            <dbReference type="Rhea" id="RHEA:32287"/>
            <dbReference type="ChEBI" id="CHEBI:1178"/>
            <dbReference type="ChEBI" id="CHEBI:35121"/>
            <dbReference type="EC" id="4.2.1.33"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3">Amino-acid biosynthesis; L-leucine biosynthesis; L-leucine from 3-methyl-2-oxobutanoate: step 2/4.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Heterodimer of LeuC and LeuD.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the LeuD family. LeuD type 1 subfamily.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.33" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000022">
        <property type="protein sequence ID" value="CTQ75685.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673547.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000022.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04328"/>
    <dbReference type="EnsemblBacteria" id="CTQ75685">
        <property type="protein sequence ID" value="CTQ75685"/>
        <property type="gene ID" value="LAX5112_04328"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00048">
        <property type="reaction ID" value="UER00071"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009316">
        <property type="term" value="C:3-isopropylmalate dehydratase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003861">
        <property type="term" value="F:3-isopropylmalate dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009098">
        <property type="term" value="P:leucine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd01577">
        <property type="entry name" value="IPMI_Swivel"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.19.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004431">
        <property type="entry name" value="3-IsopropMal_deHydase_ssu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015928">
        <property type="entry name" value="Aconitase/3IPM_dehydase_swvl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000573">
        <property type="entry name" value="AconitaseA/IPMdHydase_ssu_swvl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033940">
        <property type="entry name" value="IPMI_Swivel"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00694">
        <property type="entry name" value="Aconitase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00171">
        <property type="entry name" value="leuD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="10" id="KW-0100">Branched-chain amino acid biosynthesis</keyword>
    <keyword evidence="7" id="KW-0432">Leucine biosynthesis</keyword>
    <keyword evidence="9 13" id="KW-0456">Lyase</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aconitase_C" evidence="12">
        <location>
            <begin position="2"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="186"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="11">
        <location>
            <begin position="193"/>
            <end position="212"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00002695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00009845"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00011271"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00011998"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022430"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF00694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="CTQ75685.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="212" mass="23252" checksum="DE6407198A3B7742" modified="2015-12-09" version="1">MAGWTEHQGQAVALPVHNIDTDQLIPARFMSTPRSEGYGQFLLHDLRRLDDGLECPDFPLNQFPQASILIAGRNFGSGSSREAAVYALVDAGFKAVVAPSFGDIFASNAVNNGLLPALISEADLECLTGELNEGCGPAHIHLEHGYIIVGGSEVPFSLDNSWRTKLINGWDDIDLTLQHERAIEKHKQDRRTTSSWVWPNAEDQNSQMNGSQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AL24</accession>
    <name>A0A0M7AL24_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04036</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ74920.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673326.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74920">
        <property type="protein sequence ID" value="CTQ74920"/>
        <property type="gene ID" value="LAX5112_04036"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="32"/>
            <end position="53"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74920.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="138" mass="14792" checksum="02A927303AD87CE0" modified="2015-12-09" version="1">MRSSSFYKTTVHHQVARPFTAKTKAMDPIANFKLASIFILALLTVLIAGIISMNASNASQAQDVGQTAPQGMMATKTDRAVIPAKAGNCESQTWGAWSAECAAELTGASKVRTVSYVTIEKQPNTVNQTILARYPSNN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALS0</accession>
    <name>A0A0M7ALS0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04253</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75481.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673487.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000021.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75481">
        <property type="protein sequence ID" value="CTQ75481"/>
        <property type="gene ID" value="LAX5112_04253"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ75481.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="90" mass="10588" checksum="17137F595B46EE35" modified="2015-12-09" version="1">MTKDEFQTVRKKWIRDDAKCEITEMPDEAEQKIIEKLDQIDRDIAERPEILIPLTQEMYQGMRRLAAGIELDMNEPIIEGTFSCSGKKEW</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AM47</accession>
    <name>A0A0M7AM47_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Bacillibactin transport regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">btr_2</name>
        <name evidence="3" type="ORF">LAX5112_04269</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75512.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673511.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000021.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04269"/>
    <dbReference type="EnsemblBacteria" id="CTQ75512">
        <property type="protein sequence ID" value="CTQ75512"/>
        <property type="gene ID" value="LAX5112_04269"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018062">
        <property type="entry name" value="HTH_AraC-typ_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020449">
        <property type="entry name" value="Tscrpt_reg_HTH_AraC-type"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00032">
        <property type="entry name" value="HTHARAC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00041">
        <property type="entry name" value="HTH_ARAC_FAMILY_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="2">
        <location>
            <begin position="194"/>
            <end position="292"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ75512.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="292" mass="33141" checksum="6FED30B016CD7ECD" modified="2015-12-09" version="1">MPRRYAEIYPSLPLLSSDDMAHVSAAALMSVRYFRAEPDTMPEEVFAEHHVLLNLCETPHRVQNWRGGELRDFTFEKDEIVVTPAGLRSGWRWFGTSDVIVVTLDPKKVERFALHELGLVLTHQQLADLPQFQDSDLCAAGVMLRDALETDDLSSGVMFEAMSRVFLVKLLQKYGQQQAEDLALSARFTSEHYKRVLSFIRERLDHTISVEELAQEAGMSASHFARVFKETVGETPMQYVLAYRIEQAIGMMRDPKRPLGDIAIACGFADQAHFSRSFKQVTGQTPRQYRAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AM58</accession>
    <name>A0A0M7AM58_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7 10 11">Ribulose-phosphate 3-epimerase</fullName>
            <ecNumber evidence="7 10 11">5.1.3.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10 15" type="primary">rpe</name>
        <name evidence="15" type="ORF">LAX5112_04522</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Catalyzes the reversible epimerization of D-ribulose 5-phosphate to D-xylulose 5-phosphate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 10 11">
            <text>D-ribulose 5-phosphate = D-xylulose 5-phosphate</text>
            <dbReference type="Rhea" id="RHEA:13677"/>
            <dbReference type="ChEBI" id="CHEBI:57737"/>
            <dbReference type="ChEBI" id="CHEBI:58121"/>
            <dbReference type="EC" id="5.1.3.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="3">
            <name>Co(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:48828"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="5">
            <name>Fe(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29033"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="4">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="10 13">
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </cofactor>
        <text evidence="10 13">Binds 1 divalent metal cation per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="10">Carbohydrate degradation.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6 10 11">Belongs to the ribulose-phosphate 3-epimerase family.</text>
    </comment>
    <dbReference type="EC" id="5.1.3.1" evidence="7 10 11"/>
    <dbReference type="EMBL" id="CXWD01000025">
        <property type="protein sequence ID" value="CTQ76215.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673717.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000025.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04522"/>
    <dbReference type="EnsemblBacteria" id="CTQ76215">
        <property type="protein sequence ID" value="CTQ76215"/>
        <property type="gene ID" value="LAX5112_04522"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00391"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004750">
        <property type="term" value="F:D-ribulose-phosphate 3-epimerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019323">
        <property type="term" value="P:pentose catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006098">
        <property type="term" value="P:pentose-phosphate shunt"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00429">
        <property type="entry name" value="RPE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02227">
        <property type="entry name" value="RPE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026019">
        <property type="entry name" value="Ribul_P_3_epim"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000056">
        <property type="entry name" value="Ribul_P_3_epim-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011060">
        <property type="entry name" value="RibuloseP-bd_barrel"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11749">
        <property type="entry name" value="PTHR11749"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00834">
        <property type="entry name" value="Ribul_P_3_epim"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001461">
        <property type="entry name" value="RPE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51366">
        <property type="entry name" value="SSF51366"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01163">
        <property type="entry name" value="rpe"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01085">
        <property type="entry name" value="RIBUL_P_3_EPIMER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10 11" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="13" id="KW-0170">Cobalt</keyword>
    <keyword evidence="9 10 11" id="KW-0413">Isomerase</keyword>
    <keyword evidence="13" id="KW-0464">Manganese</keyword>
    <keyword evidence="8 10 13" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="13" id="KW-0862">Zinc</keyword>
    <feature type="region of interest" description="Substrate binding" evidence="10 14">
        <location>
            <begin position="144"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="10">
        <location>
            <begin position="175"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="10 14">
        <location>
            <begin position="197"/>
            <end position="198"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="10 12">
        <location>
            <position position="37"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="10 12">
        <location>
            <position position="175"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10 14">
        <location>
            <position position="10"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10 13">
        <location>
            <position position="35"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10 13">
        <location>
            <position position="37"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10 13 14">
        <location>
            <position position="68"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10 13">
        <location>
            <position position="175"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="177"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001782"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00001941"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00001954"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00009541"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00013188"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02227"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRNR" id="PIRNR001461"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRSR" id="PIRSR001461-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="PIRSR" id="PIRSR001461-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="PIRSR" id="PIRSR001461-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="CTQ76215.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="223" mass="23781" checksum="9C3C2D6D82F71B08" modified="2015-12-09" version="1">MPREIIIAPSVLASDFSKLGQEVRDVVEAGADWIHLDVMDGHFVPNITFGPDVIAKMRPHTDKVFDTHLMIEPCDPYLEAFAKAGSDIITVHAEATTHLDRSLQAIRALGKKAGVSLNPATPESVLEYVLDRLDLILVMTVNPGFGGQKFIEAMVEKTARIKQMIGDRPIDLEIDGGVTPDTAPLVAAAGANVLVAGSAVFKGGTVDAYKTNINAIRTAAAIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMP3</accession>
    <name>A0A0M7AMP3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04263</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75500.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673493.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000021.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75500">
        <property type="protein sequence ID" value="CTQ75500"/>
        <property type="gene ID" value="LAX5112_04263"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025528">
        <property type="entry name" value="BrnA_antitoxin"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14384">
        <property type="entry name" value="BrnA_antitoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ75500.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="88" mass="10174" checksum="9D4609E9C60077FC" modified="2015-12-09" version="1">MPKRYAKPITSDEYKQLQDTDIDYSDIPETDEAFWANAKIHPPAKKKVVSLRLDQEVIDFFKQGEGKRHTSRMAAVLESYVKHHKEAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMQ1</accession>
    <name>A0A0M7AMQ1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04365</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75801.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673586.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000023.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75801">
        <property type="protein sequence ID" value="CTQ75801"/>
        <property type="gene ID" value="LAX5112_04365"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="45"/>
            <end position="66"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75801.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="70" mass="7462" checksum="35199C9CBDBE3BF9" modified="2015-12-09" version="1">MKILKYWAAVFSVAFVGYVLARVVAGLMANETRPLLDPIGAPVSNVIEVTVGCILAGLSFGTILYFNRGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANY8</accession>
    <name>A0A0M7ANY8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Putative amino-acid-binding protein YxeM</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">yxeM_3</name>
        <name evidence="4" type="ORF">LAX5112_04724</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000029">
        <property type="protein sequence ID" value="CTQ76848.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673896.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000029.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04724"/>
    <dbReference type="EnsemblBacteria" id="CTQ76848">
        <property type="protein sequence ID" value="CTQ76848"/>
        <property type="gene ID" value="LAX5112_04724"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809625" evidence="2">
        <location>
            <begin position="21"/>
            <end position="261"/>
        </location>
    </feature>
    <feature type="domain" description="PBPb" evidence="3">
        <location>
            <begin position="37"/>
            <end position="260"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00497"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ76848.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="261" mass="28635" checksum="F382E698F5D0DD52" modified="2015-12-09" version="1">MKVLSLALALGVMSVATASAQTVKICDDEAGWPPYVYNPIENGAANTSKIEGAAVDFMAAVLGDAGIDHTIELLPWKRCLKEVADFGSGGDFEAFSNGSYNEERLKIYYITKPIYETNSGLFYSEAKFPNGLDLKSVDDAKKYKMCGVFGYNYENWNMTNDDLDTSAKTTEQALKKVEAGRCDAVLSSIEPVIGSAAIGKPIVPEGVKAQKFDFMDDLSFHIYIAKSSPRGEKLRDKIDASIDKLRGDGTHEQIFSKYLNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AP12</accession>
    <name>A0A0M7AP12_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Flagellar biosynthesis protein FlhA</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">flhA_3</name>
        <name evidence="7" type="synonym">flhA</name>
        <name evidence="9" type="ORF">LAX5112_04199</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cell membrane</location>
            <topology evidence="7">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75354.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008196663.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04199"/>
    <dbReference type="EnsemblBacteria" id="CTQ75354">
        <property type="protein sequence ID" value="CTQ75354"/>
        <property type="gene ID" value="LAX5112_04199"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044780">
        <property type="term" value="P:bacterial-type flagellum assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009306">
        <property type="term" value="P:protein secretion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.540">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.30.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12790">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042194">
        <property type="entry name" value="FHIPEP_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042193">
        <property type="entry name" value="FHIPEP_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042196">
        <property type="entry name" value="FHIPEP_4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025505">
        <property type="entry name" value="FHIPEP_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006301">
        <property type="entry name" value="FlhA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001712">
        <property type="entry name" value="T3SS_FHIPEP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30161">
        <property type="entry name" value="PTHR30161"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00771">
        <property type="entry name" value="FHIPEP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005419">
        <property type="entry name" value="FlhA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00949">
        <property type="entry name" value="TYPE3IMAPROT"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01398">
        <property type="entry name" value="FlhA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00994">
        <property type="entry name" value="FHIPEP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1005">Bacterial flagellum biogenesis</keyword>
    <keyword evidence="7" id="KW-1006">Bacterial flagellum protein export</keyword>
    <keyword evidence="3 7" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="9" id="KW-0966">Cell projection</keyword>
    <keyword evidence="9" id="KW-0969">Cilium</keyword>
    <keyword evidence="9" id="KW-0282">Flagellum</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0653">Protein transport</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="7" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="48"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="72"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="103"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="143"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="236"/>
            <end position="257"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="277"/>
            <end position="299"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="311"/>
            <end position="331"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="8">
        <location>
            <begin position="9"/>
            <end position="25"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008835"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU364093"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ75354.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="725" mass="76728" checksum="8C6D67C767974D4E" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7API2</accession>
    <name>A0A0M7API2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04275</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75524.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673503.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000021.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75524">
        <property type="protein sequence ID" value="CTQ75524"/>
        <property type="gene ID" value="LAX5112_04275"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008146">
        <property type="term" value="F:sulfotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005331">
        <property type="entry name" value="Sulfotransferase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03567">
        <property type="entry name" value="Sulfotransfer_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ75524.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="262" mass="29982" checksum="0CA8694F2AE94648" modified="2015-12-09" version="1">MNTVLVHYHLFKNAGTSFDKILKKNFGEQWQEKEFELGEGCFTNEISVREYLNSNPNIKALSSHTALLPPPILSDTEAFPVVFLRHPIVRLKSAYLFEKEQKADTYGAQLAKRCSFSEYIVERIGTKGDYSCRNFQSRRLSTLFPNPINADSDIQLRAVNATKILPFIGVVELFDLSVRLLSFLLEARGIEFISETAKENVTDTRALSTDKKILEIKQELGDEIFDLLSSANMIDLEVYELSKKLLRNSERRMKILQGMNFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQB2</accession>
    <name>A0A0M7AQB2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04679</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000028">
        <property type="protein sequence ID" value="CTQ76701.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76701">
        <property type="protein sequence ID" value="CTQ76701"/>
        <property type="gene ID" value="LAX5112_04679"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ76701.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="78" mass="8789" checksum="488A8611F75B19EC" modified="2015-12-09" version="1">MPDIKEVIDEAKQTRDEIKLKIHLGSKELQDEWSDLEDKWNDFETKAKLGEAADDISDAASVLGEELATAFKRIKSAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARP0</accession>
    <name>A0A0M7ARP0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Glucose-resistance amylase regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ccpA_3</name>
        <name evidence="5" type="ORF">LAX5112_04603</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000027">
        <property type="protein sequence ID" value="CTQ76473.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04603"/>
    <dbReference type="EnsemblBacteria" id="CTQ76473">
        <property type="protein sequence ID" value="CTQ76473"/>
        <property type="gene ID" value="LAX5112_04603"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01392">
        <property type="entry name" value="HTH_LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000843">
        <property type="entry name" value="HTH_LacI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025997">
        <property type="entry name" value="SBP_2_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00356">
        <property type="entry name" value="LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13407">
        <property type="entry name" value="Peripla_BP_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00036">
        <property type="entry name" value="HTHLACI"/>
    </dbReference>
    <dbReference type="SMART" id="SM00354">
        <property type="entry name" value="HTH_LACI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50932">
        <property type="entry name" value="HTH_LACI_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH lacI-type" evidence="4">
        <location>
            <begin position="3"/>
            <end position="57"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ76473.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="341" mass="37585" checksum="FB6803F1CC598BCD" modified="2015-12-09" version="1">MRPTVHDIAREAGVSLSTVDRVLNGRTDVRPKNVERVQEAVRKLGYIRDTNAANLAKKRRYKFMFVLPQGPNHFVDTVGEAIREAADAQVTDRADVEIAYVNVSDPHAVAKKLTMLDLDLLDGVALMVPETPQVRDAIAHIKDAGVHVVAFVSDLPNSRSDHFIGTDNFSAGQTAGALIGKFLRKECGSVLVAANSMVARDSIERRHGFDEILLSEFTDLKALPTIEFYDDPDRIADTLSRALSAYPDLKAVYSMGSGNAAMLDALRPFAAERDLVVVAHDLTSVTRQALMDREIDAVIVQNVGHLARSALRVLRAKCDGANIYEAQEQIRIEIILRQNLY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASC1</accession>
    <name>A0A0M7ASC1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Assimilatory nitrite reductase [NAD(P)H] small subunit</fullName>
            <ecNumber evidence="10">1.7.1.4</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">nasE_2</name>
        <name evidence="10" type="ORF">LAX5112_04871</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EC" id="1.7.1.4" evidence="10"/>
    <dbReference type="EMBL" id="CXWD01000033">
        <property type="protein sequence ID" value="CTQ77316.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674019.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000033.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04871"/>
    <dbReference type="EnsemblBacteria" id="CTQ77316">
        <property type="protein sequence ID" value="CTQ77316"/>
        <property type="gene ID" value="LAX5112_04871"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051537">
        <property type="term" value="F:2 iron, 2 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008942">
        <property type="term" value="F:nitrite reductase [NAD(P)H] activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.102.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013130">
        <property type="entry name" value="Fe3_Rdtase_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017941">
        <property type="entry name" value="Rieske_2Fe-2S"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036922">
        <property type="entry name" value="Rieske_2Fe-2S_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01794">
        <property type="entry name" value="Ferric_reduct"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00355">
        <property type="entry name" value="Rieske"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50022">
        <property type="entry name" value="SSF50022"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51296">
        <property type="entry name" value="RIESKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0408">Iron</keyword>
    <keyword evidence="6" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="15"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="53"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="90"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="130"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="172"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="197"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="domain" description="Rieske" evidence="9">
        <location>
            <begin position="239"/>
            <end position="335"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51296"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ77316.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="355" mass="38786" checksum="60B7DB4A8904C9E6" modified="2015-12-09" version="1">MSVQYTPVLWNRNKLVYDAVLLIAVALYLYVFIRYAPAFEDVTKPIDGATLRMRAFGSCAFLMLTVILCIGPLARLDRRFLPLLYNRRHFGVLTAGIAAVHANYVLGWYFNFSPTDKYVALLSSNTSYGQILGFPFEALGIGALLILFVLAATSHDFWLSFLGAPLWKVLHMSIYIAYAFVVLHVALGALQGPGDPILTSLVTASVVLVCGLHFATGRMEAARERGEATAKASLQEAGWVVAAEVDEIDEDCAKVVTLDDDERVAIFKYDGKLSAITNACAHQNGPLGEGKVLWGCITCPWHGYQYNLADGRAPEPFTEKISTYRLKLIGSTVLLDPKALPPGTHVEPVKLGEGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASP0</accession>
    <name>A0A0M7ASP0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04935</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000036">
        <property type="protein sequence ID" value="CTQ77521.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674078.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000036.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04935"/>
    <dbReference type="EnsemblBacteria" id="CTQ77521">
        <property type="protein sequence ID" value="CTQ77521"/>
        <property type="gene ID" value="LAX5112_04935"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809699" evidence="1">
        <location>
            <begin position="22"/>
            <end position="270"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77521.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="270" mass="28573" checksum="E78A8EB5884E3AF9" modified="2015-12-09" version="1">MLKILTRAAAALCLLTYTAQAQDGSADLAAKTQNPIASMISLPFENTFDFGAGNGDAWIMNVQPVIPVTVGNWNLVSRVIAPIADAPGGVQTPGNPNSIGSGRAFGLGDINYSLFVSPAEAGRFIWGVGPSVTLPTATDSRLGSAKLSMGPTAVVLTQPKPWSLGVLARQLWSVAGPDGRADVNQFMVQPFVNYNFGDGWYAFSDPPITANWEAESDQMWTVPAGAGVGKIFKLGNQPMNVRAGAFANVIKPDAAPDWYAKLTVQFLFPK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASU3</accession>
    <name>A0A0M7ASU3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Protein-methionine-sulfoxide reductase catalytic subunit MsrP</fullName>
            <ecNumber evidence="5">1.8.5.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">yedY</name>
        <name evidence="5" type="synonym">msrP</name>
        <name evidence="7" type="ORF">LAX5112_04726</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>a quinone + H2O + L-methionyl-[protein] = a quinol + L-methionyl-(R)-S-oxide-[protein]</text>
            <dbReference type="Rhea" id="RHEA:51296"/>
            <dbReference type="Rhea" id="RHEA-COMP:12313"/>
            <dbReference type="Rhea" id="RHEA-COMP:12314"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16044"/>
            <dbReference type="ChEBI" id="CHEBI:24646"/>
            <dbReference type="ChEBI" id="CHEBI:45764"/>
            <dbReference type="ChEBI" id="CHEBI:132124"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>a quinone + H2O + L-methionyl-[protein] = a quinol + L-methionyl-(S)-S-oxide-[protein]</text>
            <dbReference type="Rhea" id="RHEA:51292"/>
            <dbReference type="Rhea" id="RHEA-COMP:12313"/>
            <dbReference type="Rhea" id="RHEA-COMP:12315"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16044"/>
            <dbReference type="ChEBI" id="CHEBI:24646"/>
            <dbReference type="ChEBI" id="CHEBI:44120"/>
            <dbReference type="ChEBI" id="CHEBI:132124"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="5">
            <name>Mo-molybdopterin</name>
            <dbReference type="ChEBI" id="CHEBI:71302"/>
        </cofactor>
        <text evidence="5">Binds 1 Mo-molybdopterin (Mo-MPT) cofactor per subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Heterodimer of a catalytic subunit (MsrP) and a heme-binding subunit (MsrQ).</text>
    </comment>
    <comment type="PTM">
        <text evidence="5">Predicted to be exported by the Tat system. The position of the signal peptide cleavage has not been experimentally proven.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the MsrP family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="1.8.5.-" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000029">
        <property type="protein sequence ID" value="CTQ76853.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673898.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000029.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04726"/>
    <dbReference type="EnsemblBacteria" id="CTQ76853">
        <property type="protein sequence ID" value="CTQ76853"/>
        <property type="gene ID" value="LAX5112_04726"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043546">
        <property type="term" value="F:molybdopterin cofactor binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016672">
        <property type="term" value="F:oxidoreductase activity, acting on a sulfur group of donors, quinone or similar compound as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030091">
        <property type="term" value="P:protein repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01206">
        <property type="entry name" value="MsrP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022867">
        <property type="entry name" value="MsrP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000572">
        <property type="entry name" value="OxRdtase_Mopterin-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036374">
        <property type="entry name" value="OxRdtase_Mopterin-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006311">
        <property type="entry name" value="TAT_signal"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00174">
        <property type="entry name" value="Oxidored_molyb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56524">
        <property type="entry name" value="SSF56524"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="1 5" id="KW-0500">Molybdenum</keyword>
    <keyword evidence="4 5 7" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 5" id="KW-0732">Signal</keyword>
    <feature type="domain" description="Oxidored_molyb" evidence="6">
        <location>
            <begin position="102"/>
            <end position="257"/>
        </location>
    </feature>
    <feature type="region of interest" description="Molybdopterin binding" evidence="5">
        <location>
            <begin position="86"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="region of interest" description="Molybdopterin binding" evidence="5">
        <location>
            <begin position="239"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="83"/>
        </location>
        <ligand>
            <name>Mo-molybdopterin</name>
            <dbReference type="ChEBI" id="CHEBI:71302"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="140"/>
        </location>
        <ligand>
            <name>Mo-molybdopterin</name>
            <dbReference type="ChEBI" id="CHEBI:71302"/>
        </ligand>
        <ligandPart>
            <name>Mo</name>
            <dbReference type="ChEBI" id="CHEBI:28685"/>
        </ligandPart>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="175"/>
        </location>
        <ligand>
            <name>Mo-molybdopterin</name>
            <dbReference type="ChEBI" id="CHEBI:71302"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="228"/>
        </location>
        <ligand>
            <name>Mo-molybdopterin</name>
            <dbReference type="ChEBI" id="CHEBI:71302"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022505"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01206"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00174"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ76853.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="320" mass="36339" checksum="A9DDE21189F4DFEF" modified="2015-12-09" version="1">MNILTKRSWELPEREATPEHVFLNRRQILAGLAGGGALLGSGLGMRPAFAEADPSAGLYPVPRNSTFTLDRPVTDEDVASKYNNFYEFGSHKQIWPAAQNLEIRPWTVMMDGLIDNPQTIDIDALLAKMPLEERLYRHRCVEAWSMAVPWSGFPLAELVKLAGPQTGAKYLRFETFLNPEVASGQKQSWYPWPYIEGLTLAEATNELAFMATGIYGKPLAKQFGAPIRLVTPWKYGFKCIKSVVRISFTDKRPVSFWEEIQPKEYGFWANVNPSVPHRRWPQATEKLLGTDQRRNTLLYNGYEEQVAGLYKDMSGELLFM</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AT11</accession>
    <name>A0A0M7AT11_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04680</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000028">
        <property type="protein sequence ID" value="CTQ76704.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673888.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000028.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04680"/>
    <dbReference type="EnsemblBacteria" id="CTQ76704">
        <property type="protein sequence ID" value="CTQ76704"/>
        <property type="gene ID" value="LAX5112_04680"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022028">
        <property type="entry name" value="DUF3604"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12228">
        <property type="entry name" value="DUF3604"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809928" evidence="1">
        <location>
            <begin position="25"/>
            <end position="638"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76704.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="638" mass="70918" checksum="11BE701E64AF84CE" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AT30</accession>
    <name>A0A0M7AT30_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Putative sulfate transporterc/MT1781</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_04752</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 5">Membrane</location>
            <topology evidence="1 5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000030">
        <property type="protein sequence ID" value="CTQ76943.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673918.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000030.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04752"/>
    <dbReference type="EnsemblBacteria" id="CTQ76943">
        <property type="protein sequence ID" value="CTQ76943"/>
        <property type="gene ID" value="LAX5112_04752"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008271">
        <property type="term" value="F:secondary active sulfate transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.750.24">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011547">
        <property type="entry name" value="SLC26A/SulP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001902">
        <property type="entry name" value="SLC26A/SulP_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002645">
        <property type="entry name" value="STAS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036513">
        <property type="entry name" value="STAS_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11814">
        <property type="entry name" value="PTHR11814"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01740">
        <property type="entry name" value="STAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00916">
        <property type="entry name" value="Sulfate_transp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52091">
        <property type="entry name" value="SSF52091"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00815">
        <property type="entry name" value="sulP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50801">
        <property type="entry name" value="STAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="26"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="53"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="75"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="101"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="134"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="179"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="217"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="266"/>
            <end position="294"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="344"/>
            <end position="363"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="370"/>
            <end position="388"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="400"/>
            <end position="431"/>
        </location>
    </feature>
    <feature type="domain" description="STAS" evidence="6">
        <location>
            <begin position="454"/>
            <end position="567"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU362052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ76943.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="594" mass="62741" checksum="2701B60C6CCD2FED" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AT66</accession>
    <name>A0A0M7AT66_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04995</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000038">
        <property type="protein sequence ID" value="CTQ77652.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674120.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000038.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04995"/>
    <dbReference type="EnsemblBacteria" id="CTQ77652">
        <property type="protein sequence ID" value="CTQ77652"/>
        <property type="gene ID" value="LAX5112_04995"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ77652.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="114" mass="12985" checksum="B1F05D187B44FBEF" modified="2015-12-09" version="1">MSVRPPQILHKPKDDEDPLSQALQNEILNEKAATLFRLQKRLETALRKLDAARVDAESTDETISPHLAEACEALWYVSIQREMCGLRNSRAYYDELCVPPDVRLHMGPNIRKGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ATQ6</accession>
    <name>A0A0M7ATQ6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">V8-like Glu-specific endopeptidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04989</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000038">
        <property type="protein sequence ID" value="CTQ77640.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674118.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000038.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04989"/>
    <dbReference type="EnsemblBacteria" id="CTQ77640">
        <property type="protein sequence ID" value="CTQ77640"/>
        <property type="gene ID" value="LAX5112_04989"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004252">
        <property type="term" value="F:serine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.10.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043708">
        <property type="entry name" value="DUF5648"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009003">
        <property type="entry name" value="Peptidase_S1_PA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043504">
        <property type="entry name" value="Peptidase_S1_PA_chymotrypsin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001254">
        <property type="entry name" value="Trypsin_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18885">
        <property type="entry name" value="DUF5648"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00089">
        <property type="entry name" value="Trypsin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50494">
        <property type="entry name" value="SSF50494"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidase S1" evidence="1">
        <location>
            <begin position="18"/>
            <end position="200"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77640.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="383" mass="41423" checksum="650427E647955945" modified="2015-12-09" version="1">MSFEANDDSYPGQAVAFIVATWGSQSFVSSGVLVGRNDVLTASHSIYDTTLGGLADEVKIYFSYDPDESNPTFYTPAYYNYYTDFDPDNDGLIYSGDNQAFTLGGAEKDIALLSLSEAAGDIYGWFGINYSYTGGNVSVLGFPGRYDNNLTFDSGYAYKDVVDNYVDTGFLEINSGNSGGPIFTGSGSDVSVVGIVSTSAAAASVAGHENWLTSNIASNDVYMDTTTTTTPVVTTVENAIYRFFNTDTGTHFYTASSAERDTVIANASSFSYEGVAFLSANSSTDLSSLVNVYRFYNTQTGTHFYTSSEAEREDVTNNNAAFVYEGIAYQAYAGDTASNTALYRFFNTETGNHFYTAVDAERDSVQTMGQFSYEGIAYYVDIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AUY0</accession>
    <name>A0A0M7AUY0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Sulfate starvation-induced protein 7</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">fliY_2</name>
        <name evidence="3" type="ORF">LAX5112_04969</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000037">
        <property type="protein sequence ID" value="CTQ77593.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04969"/>
    <dbReference type="EnsemblBacteria" id="CTQ77593">
        <property type="protein sequence ID" value="CTQ77593"/>
        <property type="gene ID" value="LAX5112_04969"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00062">
        <property type="entry name" value="PBPb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="domain" description="PBPb" evidence="2">
        <location>
            <begin position="36"/>
            <end position="259"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00062"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ77593.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="282" mass="30797" checksum="0501EE9D3CD1D689" modified="2015-12-09" version="1">MARVAKKSLSASTFILALFGVWIAVLLMGSPAISQELRLVTSPWPPSNYLDDEGQPTGLSVAIIDAIKDKLGLSTPIEVIPWARGYKIAQSEPNILLFTAARTPEREEMGFTFIAPAVMWTHGLLAKKDSGIDIQSLEGARLQGVTAVGVRGSWQVKLLQESGIDTVEADDQETCARMLLAGRVDVWITSQLQASVVLENIDAEQSSVEPVFIHRRSPSYLMVSNGTDPQLLKKWQDAFDELKNSGALHTVAEEWSEQLGIPLIYDPEEGFSAKNDGFNTTG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZMC2</accession>
    <name>A0A0M6ZMC2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Sulfurtransferase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">sseA_1</name>
        <name evidence="4" type="ORF">LAX5112_00111</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63909.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670144.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00111"/>
    <dbReference type="EnsemblBacteria" id="CTQ63909">
        <property type="protein sequence ID" value="CTQ63909"/>
        <property type="gene ID" value="LAX5112_00111"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004792">
        <property type="term" value="F:thiosulfate sulfurtransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.250.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001763">
        <property type="entry name" value="Rhodanese-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036873">
        <property type="entry name" value="Rhodanese-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001307">
        <property type="entry name" value="Thiosulphate_STrfase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045078">
        <property type="entry name" value="TST/MPST-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11364">
        <property type="entry name" value="PTHR11364"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00581">
        <property type="entry name" value="Rhodanese"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00450">
        <property type="entry name" value="RHOD"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52821">
        <property type="entry name" value="SSF52821"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00380">
        <property type="entry name" value="RHODANESE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00683">
        <property type="entry name" value="RHODANESE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50206">
        <property type="entry name" value="RHODANESE_3"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <keyword evidence="2 4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Rhodanese" evidence="3">
        <location>
            <begin position="44"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="domain" description="Rhodanese" evidence="3">
        <location>
            <begin position="163"/>
            <end position="277"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU000507"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50206"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ63909.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="281" mass="30702" checksum="95C93A621C64E3AD" modified="2015-12-09" version="1">MTYHPLVSTDWLADHLDAPDVVVVNAWMPPVTTPHAKPVYPDTHIPGAVFFDVNEICDKNSDLPHMLPAPHVFSSAMRKLGIGDGQTIVVYDDFGFYSAARVWWTFRTFGVENVYVLDGGIPKWQAENRPVNDDPVRRPERHFSARLDHSAVANLSTVKTLSASEDGQILDARSAARFAGDAPEPRQGLRSGHMPNALNLPFTDLISEDGTFKQRDGLEQAFKNAGVDLSRPVTTTCGSGVTAAILTLALTVLGTREVSLYDGSWSEWGAREDTDVVTGAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPV0</accession>
    <name>A0A0M6ZPV0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Molybdopterin molybdenumtransferase</fullName>
            <ecNumber evidence="7">2.10.1.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">moeA_1</name>
        <name evidence="9" type="ORF">LAX5112_00196</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2 7">Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>adenylyl-molybdopterin + H(+) + molybdate = AMP + H2O + Mo-molybdopterin</text>
            <dbReference type="Rhea" id="RHEA:35047"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:36264"/>
            <dbReference type="ChEBI" id="CHEBI:62727"/>
            <dbReference type="ChEBI" id="CHEBI:71302"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="2.10.1.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="7">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="3 7">Cofactor biosynthesis; molybdopterin biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4 7">Belongs to the MoeA family.</text>
    </comment>
    <dbReference type="EC" id="2.10.1.1" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64150.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670198.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00196"/>
    <dbReference type="EnsemblBacteria" id="CTQ64150">
        <property type="protein sequence ID" value="CTQ64150"/>
        <property type="gene ID" value="LAX5112_00196"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00344"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061599">
        <property type="term" value="F:molybdopterin molybdotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006777">
        <property type="term" value="P:Mo-molybdopterin cofactor biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032324">
        <property type="term" value="P:molybdopterin cofactor biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00887">
        <property type="entry name" value="MoeA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.340.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.980.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036425">
        <property type="entry name" value="MoaB/Mog-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001453">
        <property type="entry name" value="MoaB/Mog_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038987">
        <property type="entry name" value="MoeA-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005111">
        <property type="entry name" value="MoeA_C_domain_IV"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036688">
        <property type="entry name" value="MoeA_C_domain_IV_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005110">
        <property type="entry name" value="MoeA_linker/N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036135">
        <property type="entry name" value="MoeA_linker/N_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10192">
        <property type="entry name" value="PTHR10192"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00994">
        <property type="entry name" value="MoCF_biosynth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03454">
        <property type="entry name" value="MoeA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03453">
        <property type="entry name" value="MoeA_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00852">
        <property type="entry name" value="MoCF_biosynth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53218">
        <property type="entry name" value="SSF53218"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63867">
        <property type="entry name" value="SSF63867"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63882">
        <property type="entry name" value="SSF63882"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00177">
        <property type="entry name" value="molyb_syn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0460">Magnesium</keyword>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5 7" id="KW-0500">Molybdenum</keyword>
    <keyword evidence="6 7" id="KW-0501">Molybdenum cofactor biosynthesis</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 9" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="MoCF_biosynth" evidence="8">
        <location>
            <begin position="177"/>
            <end position="316"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001529"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00002901"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005046"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00010763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022505"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023150"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU365090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="SMART" id="SM00852"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ64150.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="401" mass="41610" checksum="F9351603EBF4F9AB" modified="2015-12-09" version="1">MSLMPVSEALEMLLSGVAPLETEIVPLEAANGRYLAKPIASTRTQPPFAASAMDGYAIRHSDLKTPEAVLDVIGEAPAGHGFSGHIGPGEAVRIFTGAPVPDGADTILIQENAERSDGRIKILEIPVKGAFVRAAGLDFSEGDILLNPPLKLDYRHLALAAAMNHAVLPLVKRPKVAILATGDELVRPGGTPGPDQIIASNHAGIAAMVEDCGGEALDLGISPDEPKALAACVKRAITEEADILVTLGGASVGDHDLVQDVLGNEGMDLSFWRIAMRPGKPLMAGRLGKTKVLGLPGNPVSSLVCGLLFLKPLIAAMLGAPNGSASPKEALLAEAIGENDRRQDYVRAMLSEDADGRLIAAPFPKQDSSMLALLAKSGGLIVRPPFAPAEPAGTVVPVLVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQ10</accession>
    <name>A0A0M6ZQ10_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Cyclic di-GMP phosphodiesterase Gmr</fullName>
            <ecNumber evidence="3">3.1.4.52</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">gmr_3</name>
        <name evidence="3" type="ORF">LAX5112_00422</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.4.52" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64845.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00422"/>
    <dbReference type="EnsemblBacteria" id="CTQ64845">
        <property type="protein sequence ID" value="CTQ64845"/>
        <property type="gene ID" value="LAX5112_00422"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071111">
        <property type="term" value="F:cyclic-guanylate-specific phosphodiesterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd01948">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01949">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.450">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001633">
        <property type="entry name" value="EAL_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035919">
        <property type="entry name" value="EAL_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000160">
        <property type="entry name" value="GGDEF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000014">
        <property type="entry name" value="PAS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035965">
        <property type="entry name" value="PAS-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00563">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00990">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13188">
        <property type="entry name" value="PAS_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00052">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00267">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141868">
        <property type="entry name" value="SSF141868"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55785">
        <property type="entry name" value="SSF55785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00254">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50883">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50887">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GGDEF" evidence="2">
        <location>
            <begin position="300"/>
            <end position="433"/>
        </location>
    </feature>
    <feature type="domain" description="EAL" evidence="1">
        <location>
            <begin position="442"/>
            <end position="692"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ64845.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="697" mass="78436" checksum="17507EDD404DFF15" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRI8</accession>
    <name>A0A0M6ZRI8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Taurine--pyruvate aminotransferase</fullName>
            <ecNumber evidence="3">2.6.1.77</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">tpa_1</name>
        <name evidence="3" type="ORF">LAX5112_00431</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.6.1.77" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64872.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670394.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00431"/>
    <dbReference type="EnsemblBacteria" id="CTQ64872">
        <property type="protein sequence ID" value="CTQ64872"/>
        <property type="gene ID" value="LAX5112_00431"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008483">
        <property type="term" value="F:transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00610">
        <property type="entry name" value="OAT_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005814">
        <property type="entry name" value="Aminotrans_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00202">
        <property type="entry name" value="Aminotran_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000521">
        <property type="entry name" value="Transaminase_4ab_Lys_Orn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00600">
        <property type="entry name" value="AA_TRANSFER_CLASS_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="1 2" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="3" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU003560"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ64872.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="449" mass="48844" checksum="5644F63E1CBC0671" modified="2015-12-09" version="1">MTQLPNSLEARDVAVQLHSYADARKQEEIGSLVIDKGEGIYVTDIHGKRYIEGMAGLWSVAVGFGEKRLVDAAARQMEKLPYYHTFTYKTHGPSIELAEKLIEMAPVPMSKVYFTNSGSEANDTALKLIWYRSNALGQPERKKVISRVRGYHGVTIASASLTGLPNNHRSFDLPLPQVLHTTSPHYRSQKKDGESEADFAKRCAQDLEDLILAEGPETIAAFFAEPVMGAGGVIVPPDGYWEAVQPVLEKYGILFVADEVICGFGRTGNMFGTETYNLQPDIMTLSKALSSSYQPISALLINDNVYQPIADESHKIGVLGHGYTGSGHPVAAAVALENLKIIEERDLVGNVRAMSPLFQKRLAGLAQNPLVVETRGIGLIGAAELHHEALADTPGALGARTNAVFLEKGLISRNMLDAMAFCPPLIITENQINEMFDIAEDSLQAAALL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRR0</accession>
    <name>A0A0M6ZRR0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">HTH-type transcriptional regulator McbR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">mcbR_2</name>
        <name evidence="5" type="ORF">LAX5112_00458</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64952.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670546.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00458"/>
    <dbReference type="EnsemblBacteria" id="CTQ64952">
        <property type="protein sequence ID" value="CTQ64952"/>
        <property type="gene ID" value="LAX5112_00458"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.530">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011711">
        <property type="entry name" value="GntR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008920">
        <property type="entry name" value="TF_FadR/GntR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000524">
        <property type="entry name" value="Tscrpt_reg_HTH_GntR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07729">
        <property type="entry name" value="FCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00392">
        <property type="entry name" value="GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00895">
        <property type="entry name" value="FCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00345">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48008">
        <property type="entry name" value="SSF48008"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50949">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH gntR-type" evidence="4">
        <location>
            <begin position="12"/>
            <end position="79"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ64952.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="216" mass="24121" checksum="401923383F57A746" modified="2015-12-09" version="1">MSEPKIARIDQSKLRESVYEALREAFTRGAFAPGESVSLRTLADQLGTSLTPVREAVRRLVAEGALVDTPSRTLEVPPFDADRMRELKSARLALEAILLDEAMDHMDDAAIDALAAIIARPRPEGDLPDLTQNYEFHFSLYRQSRSQVILPLVEALWLQYGAFLNLVVQEKAASEIPEHIHHEEIIAALRAKDRAAAQKALAEDIERSFKLLLPET</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZS31</accession>
    <name>A0A0M6ZS31_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Creatinine amidohydrolase</fullName>
            <ecNumber evidence="5">3.5.2.10</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">crnA_1</name>
        <name evidence="5" type="ORF">LAX5112_00678</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="4">Belongs to the creatininase superfamily.</text>
    </comment>
    <dbReference type="EC" id="3.5.2.10" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65565.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670623.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00678"/>
    <dbReference type="EnsemblBacteria" id="CTQ65565">
        <property type="protein sequence ID" value="CTQ65565"/>
        <property type="gene ID" value="LAX5112_00678"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047789">
        <property type="term" value="F:creatininase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10310">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024087">
        <property type="entry name" value="Creatininase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003785">
        <property type="entry name" value="Creatininase/forma_Hydrolase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35005">
        <property type="entry name" value="PTHR35005"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02633">
        <property type="entry name" value="Creatininase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF102215">
        <property type="entry name" value="SSF102215"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00024029"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ65565.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="263" mass="28753" checksum="D4C37787AD241D70" modified="2015-12-09" version="1">MLPKPYWQDMTTTDFDHPEVKDWIAVLPVAAIEQHGPHLPVYTDTAIAEGQIQRVIELLPDDVPASFLPVQAIGKSNEHISSAGTLTMTWETALQAWLELGDSILRAGVRKVVVVNSHGGNVPLIGILTRELRVRHNMLAVGTAWASFGQPEGVFSDHELTFGIHGGDVETSIMLHLRPDLVNMDMAQNFRSSQEDLASKFKHLRAHGPHAFGWKAQDLNPAGTVGDASIATAEKGKASLDHAARGFVELLQDVHAFDLAHFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZS81</accession>
    <name>A0A0M6ZS81_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Regulatory protein RecX</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_00278</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the RecX family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64384.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670258.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00278"/>
    <dbReference type="EnsemblBacteria" id="CTQ64384">
        <property type="protein sequence ID" value="CTQ64384"/>
        <property type="gene ID" value="LAX5112_00278"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006282">
        <property type="term" value="P:regulation of DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003783">
        <property type="entry name" value="Regulatory_RecX"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02631">
        <property type="entry name" value="RecX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00018111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ64384.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="176" mass="20276" checksum="81A416E29A5D3650" modified="2015-12-09" version="1">MPAERRYKIPTEDRLTRSAVHYLERYASTEANLRRVLERKVSRACHALELPPDEYRDLIETIVAKCVRNGMVNDRGFAEMKLASLRRKGQSKKKIEAQLRAKGVPVHIIEVVVAEDTSEDRTAAIAYAKRRRFGPFRDHAKRDDRRLKDIAAMCRAGFDYETARQIIDADLDDFSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSF4</accession>
    <name>A0A0M6ZSF4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Taurine import ATP-binding protein TauB</fullName>
            <ecNumber evidence="6">3.6.3.36</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">tauB_1</name>
        <name evidence="6" type="ORF">LAX5112_00728</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.36" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65709.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040450959.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00728"/>
    <dbReference type="EnsemblBacteria" id="CTQ65709">
        <property type="protein sequence ID" value="CTQ65709"/>
        <property type="gene ID" value="LAX5112_00728"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015859">
        <property type="entry name" value="ABC_transpr_TauB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42788:SF18">
        <property type="entry name" value="PTHR42788:SF18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="3"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="40"/>
            <end position="47"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ65709.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="267" mass="29594" checksum="85A3B05A61287946" modified="2015-12-09" version="1">MPLLIDNISMRFDLPNGSSIQALKDVSLTLNDGELLSVLGPSGCGKTTLLNILAGFLAPTDGQVVLNGETVTGPAPERGMVFQKGALFEWMNVRHNVDFGPRMKGMAKKQRDEITDHLLDIVGLQDFKEKAVYELSGGMQQRVALARCLANEPDVILMDEPLGALDALTREKMQGLVLKLWKETGKTVILITHSVEEALLLGERLLVMAPRPGRIHKEYQLPFADSAVNADLREVKREKGFSETRDEILNMIWEMEEEIMGRAEAAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSM9</accession>
    <name>A0A0M6ZSM9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Ribonuclease P protein component</fullName>
            <shortName evidence="5">RNase P protein</shortName>
            <shortName evidence="5">RNaseP protein</shortName>
            <ecNumber evidence="5">3.1.26.5</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Protein C5</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5 7" type="primary">rnpA</name>
        <name evidence="7" type="ORF">LAX5112_00510</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>Endonucleolytic cleavage of RNA, removing 5'-extranucleotides from tRNA precursor.</text>
            <dbReference type="EC" id="3.1.26.5"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="5">Consists of a catalytic RNA component (M1 or rnpB) and a protein subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the RnpA family.</text>
    </comment>
    <dbReference type="EC" id="3.1.26.5" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65100.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670458.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00510"/>
    <dbReference type="EnsemblBacteria" id="CTQ65100">
        <property type="protein sequence ID" value="CTQ65100"/>
        <property type="gene ID" value="LAX5112_00510"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004526">
        <property type="term" value="F:ribonuclease P activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0001682">
        <property type="term" value="P:tRNA 5'-leader removal"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00227">
        <property type="entry name" value="RNase_P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014721">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold_subgr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000100">
        <property type="entry name" value="RNase_P"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33992">
        <property type="entry name" value="PTHR33992"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00825">
        <property type="entry name" value="Ribonuclease_P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="SSF54211"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00188">
        <property type="entry name" value="rnpA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="4 5 7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 5" id="KW-0540">Nuclease</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="1 5" id="KW-0819">tRNA processing</keyword>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="102"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="6">
        <location>
            <begin position="115"/>
            <end position="137"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022759"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00227"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ65100.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="137" mass="14911" checksum="C87C5EE47A5F7453" modified="2015-12-09" version="1">MNTLKKRSDFLAVAKGGRVGRRAFVVQGLQRSAEAAPRIGYTVTKKTGNSAVRSRIKRRLRAAVAELASAEIPQNADFVLVARESALTLPFPNLVADLKSGLNQVLDPATPRGRGKPRKGTRQKQMHHRTGNRGKSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSN2</accession>
    <name>A0A0M6ZSN2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">4-hydroxyproline epimerase</fullName>
            <ecNumber evidence="2">5.1.1.8</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00753</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the proline racemase family.</text>
    </comment>
    <dbReference type="EC" id="5.1.1.8" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65779.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670678.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00753"/>
    <dbReference type="EnsemblBacteria" id="CTQ65779">
        <property type="protein sequence ID" value="CTQ65779"/>
        <property type="gene ID" value="LAX5112_00753"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047580">
        <property type="term" value="F:4-hydroxyproline epimerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008794">
        <property type="entry name" value="Pro_racemase_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33442">
        <property type="entry name" value="PTHR33442"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05544">
        <property type="entry name" value="Pro_racemase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF029792">
        <property type="entry name" value="Pro_racemase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00028">
        <property type="entry name" value="Proline_Racemase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0413">Isomerase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007529"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65779.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="310" mass="32614" checksum="CBFEFF5CC95C1C4A" modified="2015-12-09" version="1">MRVIDSHTAGEPTRLVVEGGPDLGSGSLIEKAARLEAEHMDFCASVVLEPRGHDAIIGALLLPPSQPDYAAAVIYFNNLQNLGMCGHATIGLAVTLAHMGRIEPGGHKFETPVGIVEVDLQDANTVSVVNVESYRLHKGISVDVPGQGKITGDVAWGGNWFFLVKDSPIELTLDNVPALTAYTKAIRQALENGGVTGTGGAWIDHIELFGPPKDPAAQSRNFVLCPGGAYDRSPCGTGCSAKLACLAEDGLLAPGKDWIQESVIGSTYRISYQPGTGKGVIPTITGQAFVTSDANLIFNPADPYCLGIRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSX3</accession>
    <name>A0A0M6ZSX3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Xanthine dehydrogenase accessory protein XdhC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_00760</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65798.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670684.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00760"/>
    <dbReference type="EnsemblBacteria" id="CTQ65798">
        <property type="protein sequence ID" value="CTQ65798"/>
        <property type="gene ID" value="LAX5112_00760"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014308">
        <property type="entry name" value="Xanthine_DH_XdhC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003777">
        <property type="entry name" value="XdhC_CoxI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027051">
        <property type="entry name" value="XdhC_Rossmann_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13478">
        <property type="entry name" value="XdhC_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02625">
        <property type="entry name" value="XdhC_CoxI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02964">
        <property type="entry name" value="xanthine_xdhC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="XdhC_CoxI" evidence="1">
        <location>
            <begin position="20"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="domain" description="XdhC_C" evidence="2">
        <location>
            <begin position="120"/>
            <end position="260"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02625"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ65798.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="284" mass="30726" checksum="F086167BF1EBBFC1" modified="2015-12-09" version="1">MNALSANAAAFFDAESAIIRVEVTEVRGSSPREAGTEMFVTPTRVRGTIGGGRLEQIAIDRGRAMLETRQLCDTLDVPLGPEIGQCCGGHVRLRLIWMSWSDRQDAIRRLQAEEAAQPHVYIMGAGHVGRAIADLLQHAPVTCVLVDMRQEELQKCEATVDKRLRALPEVDVFNAPPNSAFIVLTHDHGLDFLLTSAALELGHAAYVGMIGSATKRAKLRSWCRTHCDGLTIDQLICPIGATASRDKRPEIIAAFVAAEVLTALTTVQHVSDSGEEAALLEAAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTK8</accession>
    <name>A0A0M6ZTK8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00393</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64763.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670369.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00393"/>
    <dbReference type="EnsemblBacteria" id="CTQ64763">
        <property type="protein sequence ID" value="CTQ64763"/>
        <property type="gene ID" value="LAX5112_00393"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021270">
        <property type="entry name" value="DUF2849"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11011">
        <property type="entry name" value="DUF2849"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ64763.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="99" mass="10832" checksum="FE566FA3B9ACAD2B" modified="2015-12-09" version="1">MKVITANRLLDGDVVWLGENDVWVERVTLARTFDGKDDVAEGLSIGAAAEKDQKVVGVYEMDVTIEDGIIVPVRLRERIRAKGPTTHPQFGKQAQAVSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUT2</accession>
    <name>A0A0M6ZUT2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative HTH-type transcriptional regulator YurK</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yurK</name>
        <name evidence="2" type="ORF">LAX5112_00854</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66057.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670756.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00854"/>
    <dbReference type="EnsemblBacteria" id="CTQ66057">
        <property type="protein sequence ID" value="CTQ66057"/>
        <property type="gene ID" value="LAX5112_00854"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07377">
        <property type="entry name" value="WHTH_GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1410.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028978">
        <property type="entry name" value="Chorismate_lyase_/UTRA_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000524">
        <property type="entry name" value="Tscrpt_reg_HTH_GntR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011663">
        <property type="entry name" value="UTRA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00392">
        <property type="entry name" value="GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07702">
        <property type="entry name" value="UTRA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00035">
        <property type="entry name" value="HTHGNTR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00345">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00866">
        <property type="entry name" value="UTRA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64288">
        <property type="entry name" value="SSF64288"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50949">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH gntR-type" evidence="1">
        <location>
            <begin position="6"/>
            <end position="74"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66057.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="233" mass="26573" checksum="4A62CD40B1C6DE44" modified="2015-12-09" version="1">MALTDTNSWTGIREELLRRIHDRVWEPGAQIPHEADLAEEFGCARTTVNRALRDLAESGLVIRKRRAGTRVALNPPQRATLTIPIIREEVEALGKTYRHSLLERDYQPVPPMLHGVFYASLGDDVLYLKTLHFADDRPYAFEERYINLDTVPEARQRKFEVSSANEWLVHNAPYSRGDLSFSALNANEETARILDCTPGTALFAMERITWTGDAPITHVKLIFAPGYRMRSRI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVA3</accession>
    <name>A0A0M6ZVA3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">L-Ala-D/L-Glu epimerase</fullName>
            <ecNumber evidence="2">5.1.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ykfB_1</name>
        <name evidence="2" type="ORF">LAX5112_00637</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="5.1.1.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65464.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670592.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00637"/>
    <dbReference type="EnsemblBacteria" id="CTQ65464">
        <property type="protein sequence ID" value="CTQ65464"/>
        <property type="gene ID" value="LAX5112_00637"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009063">
        <property type="term" value="P:cellular amino acid catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.390.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036849">
        <property type="entry name" value="Enolase-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029017">
        <property type="entry name" value="Enolase-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029065">
        <property type="entry name" value="Enolase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018110">
        <property type="entry name" value="Mandel_Rmase/mucon_lact_enz_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013342">
        <property type="entry name" value="Mandelate_racemase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034593">
        <property type="entry name" value="Mandelate_racemase_DgoD-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013341">
        <property type="entry name" value="Mandelate_racemase_N_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48080">
        <property type="entry name" value="PTHR48080"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13378">
        <property type="entry name" value="MR_MLE_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02746">
        <property type="entry name" value="MR_MLE_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00922">
        <property type="entry name" value="MR_MLE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51604">
        <property type="entry name" value="SSF51604"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54826">
        <property type="entry name" value="SSF54826"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00908">
        <property type="entry name" value="MR_MLE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0413">Isomerase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MR_MLE" evidence="1">
        <location>
            <begin position="148"/>
            <end position="243"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00922"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65464.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="374" mass="39475" checksum="86906C7626D2F0AD" modified="2015-12-09" version="1">MRNVPDLEISGLSLWRVPLTSHETYYMASGKACATVDSMVVRIETKQGVSGWGEVCPIPQYLPAYANGVAPALEELAPVLIGRSPIGAEAAMAACNKHLIGHVYAKSAIDIALWDLTGKACGLPIYTLLGGLQTDQLPLYHSITCIAPNDMVRIAKEAIAAGMTQIQVKLGADDDWQADVARLRLVREAVGPGPIVYGDWNCGATRMDATRVGRAVADLDIMLEQPCQTLEECAAVRAATGLPMKLDENAHDIASLLKAYELGCMDAVALKLSKFGGITELRKARDLCLYAGARMCVEDTWGSDIATAAALHVAAATPRQGIMNVCDLSGYVAPRIDPVAPSRTGGFISPPSGPGLGVSPDPDVLGDPILDLAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVG3</accession>
    <name>A0A0M6ZVG3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Maltose/maltodextrin import ATP-binding protein MalK</fullName>
            <ecNumber evidence="10">3.6.3.19</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">malK_1</name>
        <name evidence="10" type="ORF">LAX5112_00631</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Peripheral membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.19" evidence="10"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65453.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670586.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00631"/>
    <dbReference type="EnsemblBacteria" id="CTQ65453">
        <property type="protein sequence ID" value="CTQ65453"/>
        <property type="gene ID" value="LAX5112_00631"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008643">
        <property type="term" value="P:carbohydrate transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03301">
        <property type="entry name" value="ABC_MalK_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015855">
        <property type="entry name" value="ABC_transpr_MalK-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008995">
        <property type="entry name" value="Mo/tungstate-bd_C_term_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040582">
        <property type="entry name" value="OB_MalK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17912">
        <property type="entry name" value="OB_MalK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50331">
        <property type="entry name" value="SSF50331"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 8 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="10" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-0472">Membrane</keyword>
    <keyword evidence="5 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ABC transporter" evidence="9">
        <location>
            <begin position="4"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="36"/>
            <end position="43"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ65453.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="353" mass="38175" checksum="E9205E46E70A6724" modified="2015-12-09" version="1">MSGVTLDGAVKKYGEVQVIHGVDLQIEHGEFCVFVGPSGCGKSTLLRMIAGLEETTGGKISIGKRDVTKSDPAERGVAMVFQTYALYPHMTVEENMGFGLKMNGHAKAAIKEKVGEAARILKLEPYLARKPKALSGGQRQRVAIGRAIVRGPEVFLFDEPLSNLDAELRVDMRVEIARLHKDIGATMIYVTHDQVEAMTLADKIVVLRAGRIEQVGSPMTLYSDPDNKFVAGFIGSPSMNFIEGTVQDSSVTIPAFGGLTVEPSVALPKNGEKVLVGLRPQHLVISETDEGAKVDLSEQLGGVAYSYLVCPTGERVIIETKGEDVPKPDSTVAITFDPANAFFFDAKTEQRLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVT4</accession>
    <name>A0A0M6ZVT4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 6">Glutamine-dependent NAD(+) synthetase</fullName>
            <ecNumber evidence="5 6">6.3.5.1</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5 6">NAD(+) synthase [glutamine-hydrolyzing]</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5 9" type="primary">nadE</name>
        <name evidence="9" type="ORF">LAX5112_00953</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5 6">
            <text>ATP + deamido-NAD(+) + H2O + L-glutamine = AMP + diphosphate + H(+) + L-glutamate + NAD(+)</text>
            <dbReference type="Rhea" id="RHEA:24384"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="ChEBI" id="CHEBI:58437"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.3.5.1"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1 5 6">Cofactor biosynthesis; NAD(+) biosynthesis; NAD(+) from deamido-NAD(+) (L-Gln route): step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the NAD synthetase family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 5 6">In the C-terminal section; belongs to the NAD synthetase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="6.3.5.1" evidence="5 6"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66397.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670874.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00953"/>
    <dbReference type="EnsemblBacteria" id="CTQ66397">
        <property type="protein sequence ID" value="CTQ66397"/>
        <property type="gene ID" value="LAX5112_00953"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00253">
        <property type="reaction ID" value="UER00334"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004359">
        <property type="term" value="F:glutaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003952">
        <property type="term" value="F:NAD+ synthase (glutamine-hydrolyzing) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008795">
        <property type="term" value="F:NAD+ synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009435">
        <property type="term" value="P:NAD biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00553">
        <property type="entry name" value="NAD_synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02090">
        <property type="entry name" value="NadE_glutamine_dep"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003010">
        <property type="entry name" value="C-N_Hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036526">
        <property type="entry name" value="C-N_Hydrolase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014445">
        <property type="entry name" value="Gln-dep_NAD_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022310">
        <property type="entry name" value="NAD/GMP_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003694">
        <property type="entry name" value="NAD_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23090">
        <property type="entry name" value="PTHR23090"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00795">
        <property type="entry name" value="CN_hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02540">
        <property type="entry name" value="NAD_synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006630">
        <property type="entry name" value="NADS_GAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56317">
        <property type="entry name" value="SSF56317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00552">
        <property type="entry name" value="nadE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50263">
        <property type="entry name" value="CN_HYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 6 7" id="KW-0436">Ligase</keyword>
    <keyword evidence="5 6 7" id="KW-0520">NAD</keyword>
    <keyword evidence="3 5 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CN hydrolase" evidence="8">
        <location>
            <begin position="6"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor; for glutaminase activity" evidence="5">
        <location>
            <position position="46"/>
        </location>
    </feature>
    <feature type="active site" description="For glutaminase activity" evidence="5">
        <location>
            <position position="116"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile; for glutaminase activity" evidence="5">
        <location>
            <position position="152"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="122"/>
        </location>
        <ligand>
            <name>L-glutamine</name>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="178"/>
        </location>
        <ligand>
            <name>L-glutamine</name>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="184"/>
        </location>
        <ligand>
            <name>L-glutamine</name>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="293"/>
            <end position="300"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="376"/>
        </location>
        <ligand>
            <name>deamido-NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58437"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="400"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="405"/>
        </location>
        <ligand>
            <name>deamido-NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58437"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="524"/>
        </location>
        <ligand>
            <name>deamido-NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58437"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005188"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007145"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRNR" id="PIRNR006630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003811"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50263"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ66397.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="555" mass="60766" checksum="15F394C8B93510A6" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZW45</accession>
    <name>A0A0M6ZW45_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Putative HTH-type transcriptional regulator YdfH</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ydfH_2</name>
        <name evidence="5" type="ORF">LAX5112_00935</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66280.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670814.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00935"/>
    <dbReference type="EnsemblBacteria" id="CTQ66280">
        <property type="protein sequence ID" value="CTQ66280"/>
        <property type="gene ID" value="LAX5112_00935"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07377">
        <property type="entry name" value="WHTH_GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.530">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011711">
        <property type="entry name" value="GntR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008920">
        <property type="entry name" value="TF_FadR/GntR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000524">
        <property type="entry name" value="Tscrpt_reg_HTH_GntR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07729">
        <property type="entry name" value="FCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00392">
        <property type="entry name" value="GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00035">
        <property type="entry name" value="HTHGNTR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00895">
        <property type="entry name" value="FCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00345">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48008">
        <property type="entry name" value="SSF48008"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50949">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH gntR-type" evidence="4">
        <location>
            <begin position="7"/>
            <end position="74"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ66280.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="222" mass="24231" checksum="BFFBC6162C45FFD0" modified="2015-12-09" version="1">MLARVKETRVNNAYEKLKADILSGELAPGFQAPEPEIAARLEMSRTPVREALIRLEAEGLVSLIPRRGAKVLSIQLQDLIEVMEILAALEGLAASILARLENKADVLAELVCASTAALLAREQNDLNGWIDQDDCFHRIIAKHSNARLEREIGLNLDQIHRAVRVLTRMNGAPVEADADHRALIDAISGGNENAASEIAQAHRLNALQALKSVFERSGVSQL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWG8</accession>
    <name>A0A0M6ZWG8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">LIV-I protein H</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">livH_5</name>
        <name evidence="7" type="ORF">LAX5112_00787</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65874.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670707.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00787"/>
    <dbReference type="EnsemblBacteria" id="CTQ65874">
        <property type="protein sequence ID" value="CTQ65874"/>
        <property type="gene ID" value="LAX5112_00787"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001851">
        <property type="entry name" value="ABC_transp_permease"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02653">
        <property type="entry name" value="BPD_transp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="6"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="60"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="91"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="140"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="179"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="211"/>
            <end position="231"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="238"/>
            <end position="258"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="264"/>
            <end position="282"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ65874.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="290" mass="29897" checksum="406EE06B63BBFF5B" modified="2015-12-09" version="1">MDALMQFVFSGLTVGAVYALVALGFTIIYNASDVVNFAQGEFVMLGGMITVFAFDAGLPLPLAALLAIVATAAIGVALNKFAIEPARGAPVVSLIIITIGASILIRGATQVLFDKQLHRLPAFSGDDPIHLLGATLLPQSLWVIGGAIAIFIALWLFFTRTLLGKAVLATANNRLAAQLVGINTGFVMTLSFALSAAIGALAGVLVTPITLVSYDVGVGLALKGFAAAMLGGMGNPKGALVGGLLLGLFEALTAGYISSQYKEAVAFVVILAVLFVMPQGLFGQKTTERV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWV1</accession>
    <name>A0A0M6ZWV1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01285</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67239.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01285"/>
    <dbReference type="EnsemblBacteria" id="CTQ67239">
        <property type="protein sequence ID" value="CTQ67239"/>
        <property type="gene ID" value="LAX5112_01285"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67239.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="89" mass="10031" checksum="5048682758330C59" modified="2015-12-09" version="1">MARYEIHSDDMAIMGEKPMTAEILFQMGLDSACGRHGTTDLVTAHKWFNIAALKGNQEAVRYRKEISGEMSSSEIAEAQRSAREWLSMH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="31" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWW8</accession>
    <name>A0A0M6ZWW8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 4">Orotate phosphoribosyltransferase</fullName>
            <shortName evidence="4">OPRT</shortName>
            <shortName evidence="4">OPRTase</shortName>
            <ecNumber evidence="2 4">2.4.2.10</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4 6" type="primary">pyrE</name>
        <name evidence="6" type="ORF">LAX5112_01059</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>diphosphate + orotidine 5'-phosphate = 5-phospho-alpha-D-ribose 1-diphosphate + orotate</text>
            <dbReference type="Rhea" id="RHEA:10380"/>
            <dbReference type="ChEBI" id="CHEBI:30839"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57538"/>
            <dbReference type="ChEBI" id="CHEBI:58017"/>
            <dbReference type="EC" id="2.4.2.10"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="4">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="1 4">Pyrimidine metabolism; UMP biosynthesis via de novo pathway; UMP from orotate: step 1/2.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrE subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.4.2.10" evidence="2 4"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66692.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670940.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01059"/>
    <dbReference type="EnsemblBacteria" id="CTQ66692">
        <property type="protein sequence ID" value="CTQ66692"/>
        <property type="gene ID" value="LAX5112_01059"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00070">
        <property type="reaction ID" value="UER00119"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004588">
        <property type="term" value="F:orotate phosphoribosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044205">
        <property type="term" value="P:'de novo' UMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019856">
        <property type="term" value="P:pyrimidine nucleobase biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06223">
        <property type="entry name" value="PRTases_typeI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2020">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01208">
        <property type="entry name" value="PyrE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023031">
        <property type="entry name" value="OPRT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006273">
        <property type="entry name" value="Orotate_PRibTrfase_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000836">
        <property type="entry name" value="PRibTrfase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029057">
        <property type="entry name" value="PRTase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00156">
        <property type="entry name" value="Pribosyltran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53271">
        <property type="entry name" value="SSF53271"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01367">
        <property type="entry name" value="pyrE_Therm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="4" id="KW-0460">Magnesium</keyword>
    <keyword evidence="3 4" id="KW-0665">Pyrimidine biosynthesis</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Pribosyltran" evidence="5">
        <location>
            <begin position="46"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="region of interest" description="5-phosphoribose 1-diphosphate binding" evidence="4">
        <location>
            <begin position="116"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="120"/>
        </location>
        <ligand>
            <name>orotate</name>
            <dbReference type="ChEBI" id="CHEBI:30839"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="148"/>
        </location>
        <ligand>
            <name>orotate</name>
            <dbReference type="ChEBI" id="CHEBI:30839"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004889"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011971"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01208"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00156"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ66692.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="193" mass="20757" checksum="081451C85B698720" modified="2015-12-09" version="1">MTRDDVLSVFRDAGAILEGHFILTSGLRSPIFLQKARVFMYPDKTEILCKALAEKIQASDLGPLDFVVSPALGGLIPGYETARHLDIPAMWVEREDGEFRLRRFEMPEGARVIIVEDIVTTGLSSRETVTSLKALGAEVLAVACLIDRSGGEADAGVPVIALADYKVPAYEPDNLPPELAALPAVKPGSRGLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZX50</accession>
    <name>A0A0M6ZX50_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01113</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66841.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670974.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01113"/>
    <dbReference type="EnsemblBacteria" id="CTQ66841">
        <property type="protein sequence ID" value="CTQ66841"/>
        <property type="gene ID" value="LAX5112_01113"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809025" evidence="1">
        <location>
            <begin position="21"/>
            <end position="266"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66841.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="266" mass="28951" checksum="7CD2708A06926914" modified="2015-12-09" version="1">MKTSVIAILSAFTAAGSALAADPFPYDPGMSGDFYTASTLRGSIGLRYWYSQGSNEFNGDLGKANTENVTGHTAEVVGVLEDTSTRTSVKGIVGFGKNTAGDQNWAGVKSNDWNTTNLGHVQLDGGWEVAKFAGGKGRIKALVGYHYLSDKTSATYFGTQTRGVTNKWHALRLGVAADGELSDRIGWSVDAAAVPWSYNQFDDGFVTLESEYTYGFEADAALNVALTSNWDIGIGGRYWWLHSEYELDQSQTYQRYGLLIESKYSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXA3</accession>
    <name>A0A0M6ZXA3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Type VI secretion protein, family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01141</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66917.1"/>
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    </dbReference>
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        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
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    <dbReference type="EnsemblBacteria" id="CTQ66917">
        <property type="protein sequence ID" value="CTQ66917"/>
        <property type="gene ID" value="LAX5112_01141"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
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        <property type="entry name" value="T6SS_TssF"/>
    </dbReference>
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        <property type="entry name" value="PTHR35370"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="UCP028304"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03359">
        <property type="entry name" value="VI_chp_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ66917.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="582" mass="65031" checksum="6D43B54D7BB9AD9F" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXN4</accession>
    <name>A0A0M6ZXN4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01090</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66780.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670958.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ66780">
        <property type="protein sequence ID" value="CTQ66780"/>
        <property type="gene ID" value="LAX5112_01090"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10600">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021866">
        <property type="entry name" value="SpoIIAA-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038396">
        <property type="entry name" value="SpoIIAA-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036513">
        <property type="entry name" value="STAS_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11964">
        <property type="entry name" value="SpoIIAA-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52091">
        <property type="entry name" value="SSF52091"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ66780.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="126" mass="13632" checksum="707FA94AE357A7B9" modified="2015-12-09" version="1">MYEILPRSDGAVLGVKVSGTLTIEEEKELIAKADELVSTYGKASFVVVLGEHVGVSLKAVASDIKWIITHMDKIARVAVVTDSKFVSALVDIDAAFANLAGIKEKHFSTAELDAAWDWIEETMPTP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXV9</accession>
    <name>A0A0M6ZXV9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Aldehyde dehydrogenase PuuC</fullName>
            <ecNumber evidence="8">1.2.1.5</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">puuC</name>
        <name evidence="8" type="ORF">LAX5112_01417</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="6">Belongs to the aldehyde dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.2.1.5" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67529.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671248.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67529">
        <property type="protein sequence ID" value="CTQ67529"/>
        <property type="gene ID" value="LAX5112_01417"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004030">
        <property type="term" value="F:aldehyde dehydrogenase [NAD(P)+] activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.309.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.605.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016161">
        <property type="entry name" value="Ald_DH/histidinol_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016163">
        <property type="entry name" value="Ald_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016160">
        <property type="entry name" value="Ald_DH_CS_CYS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029510">
        <property type="entry name" value="Ald_DH_CS_GLU"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016162">
        <property type="entry name" value="Ald_DH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015590">
        <property type="entry name" value="Aldehyde_DH_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00171">
        <property type="entry name" value="Aldedh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53720">
        <property type="entry name" value="SSF53720"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00070">
        <property type="entry name" value="ALDEHYDE_DEHYDR_CYS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00687">
        <property type="entry name" value="ALDEHYDE_DEHYDR_GLU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0521">NADP</keyword>
    <keyword evidence="3 6 8" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-0630">Potassium</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aldedh" evidence="7">
        <location>
            <begin position="31"/>
            <end position="486"/>
        </location>
    </feature>
    <feature type="active site" evidence="4">
        <location>
            <position position="268"/>
        </location>
    </feature>
    <feature type="active site" evidence="5">
        <location>
            <position position="303"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022958"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003345"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ67529.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="499" mass="53884" checksum="7EE9DC0A8B3BCF1E" modified="2015-12-09" version="1">MTDLLTRDEYKALATKLTLPVNAFIDGSYRPAQSGKTFSSVNPATGETLADIAACGSEDVDFAVIKAREAFEDGRWSKLPPGDRKDVLIRFAKLITRNRRELAVMESLDSGKTIFDCETVDVPETIHCLKWHAEAIDKIYDQVSPASDDHIAMIVREPVGVVGLVLPWNFPLLMLAWKIGPALAAGCSVIVKPAEETSLTALRLAELALEAGIPRGVFNVVPGTGPEVGEPLGRHMDVDMVSFTGSTETGRRFLHYAADSNLKEVVLEMGGKNPSVVLKDAENLDRVAAHVVNGAFWNMGENCSASSRLIVEEEIKDALMERILAHAREWTLGDPLDPEHRVGALVSSAHFQKVCSYLETDADVLMGGKSHDGAYVEPTVLEVDASSALAREEIFGPVLSVLTVRGFDEAIAMANATDYGLAASIFTSNTKKALRGARAIRAGTVTVNCFGEGDITTPFGGYKQSGFGGRDNSLSAHDQYTQLKTIWVDLSDDEDEAVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXX2</accession>
    <name>A0A0M6ZXX2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Sugar fermentation stimulation protein homolog</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1 4" type="primary">sfsA</name>
        <name evidence="4" type="ORF">LAX5112_01469</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the SfsA family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67658.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671287.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01469"/>
    <dbReference type="EnsemblBacteria" id="CTQ67658">
        <property type="protein sequence ID" value="CTQ67658"/>
        <property type="gene ID" value="LAX5112_01469"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00095">
        <property type="entry name" value="SfsA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005224">
        <property type="entry name" value="SfsA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040452">
        <property type="entry name" value="SfsA_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041465">
        <property type="entry name" value="SfsA_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30545">
        <property type="entry name" value="PTHR30545"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03749">
        <property type="entry name" value="SfsA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17746">
        <property type="entry name" value="SfsA_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00230">
        <property type="entry name" value="sfsA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SfsA_N" evidence="3">
        <location>
            <begin position="13"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="domain" description="SfsA" evidence="2">
        <location>
            <begin position="84"/>
            <end position="222"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00095"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF03749"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF17746"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ67658.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="234" mass="25703" checksum="906D380A52ABE188" modified="2015-12-09" version="1">MQFSVPLASGRLVKRYKRFLADVVLDDSGEEITAHCANPGSMLGLKEPGSRVWLSLSDNPKRKLKYSWEVIEADGALVGINTAHPNKLVEEALVAGRILELKEFETLRREVKYGKNSRIDIILEQADGSKIYVEVKNVHLMREPSLAEFPDSVTARGAKHLVELGDMVAEGHRAAMVFLVQRPDCDRLSLASDIDPNYAAAFKTAKAAGVEAYAIGCDVRLDGIDAVRDVAIND</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZF8</accession>
    <name>A0A0M6ZZF8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01483</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67691.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671296.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01483"/>
    <dbReference type="EnsemblBacteria" id="CTQ67691">
        <property type="protein sequence ID" value="CTQ67691"/>
        <property type="gene ID" value="LAX5112_01483"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006807">
        <property type="term" value="P:nitrogen compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071704">
        <property type="term" value="P:organic substance metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007848">
        <property type="entry name" value="Small_mtfrase_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05175">
        <property type="entry name" value="MTS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="MTS" evidence="1">
        <location>
            <begin position="49"/>
            <end position="168"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF05175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67691.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="275" mass="29324" checksum="E9056BB649CCA3AF" modified="2015-12-09" version="1">MTANMTDQLHPSSSDKDVEITRDAFLGGKVYVHQPKHGRHRAGLDAVYLAAALPDGLSGHIMDLGAGVGTAGFCAAARLPEISVTAVELDQTVLDLAREGLTDPANSAFADRIHLLEADITAKGRVRHAAGLKSSMADHVIMNPPYYEANRFRASPKTARAGAHMLDERGLEPWVKTATDIVKVGGTLTIIFRADGLSEILNVLSGRFGAIDVIPLRPRPDAAATRVLVRAVRASKAPLTLLPGFVLHDGPGNEFTPEAKTILRDGQGLGIPLRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZG9</accession>
    <name>A0A0M6ZZG9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">PAS domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01453</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67616.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040450768.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01453"/>
    <dbReference type="EnsemblBacteria" id="CTQ67616">
        <property type="protein sequence ID" value="CTQ67616"/>
        <property type="gene ID" value="LAX5112_01453"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009922">
        <property type="entry name" value="DUF1457"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07310">
        <property type="entry name" value="PAS_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67616.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="222" mass="24560" checksum="5D8EBB14E256FA6F" modified="2015-12-09" version="1">MKHGVTQTLYSYWDSLRGARPAPNRSEIDPGEIRGLLGDTFILETNGPSDVRYRLAGTRLCSAHCRELKGRNFLRGWDTKDREALESLIAAITEDGAAAVVGINGHTEREQELQMEMLLVPLNVPGEGRIRILGSAVPMDKPYWIGLHPVLRQSISSLRLVWPDERPYFTGASHSNINPIMPRFTAEDMPMRTPVLPQGAAVLPHGAERQVGHLTVYSGGKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZW7</accession>
    <name>A0A0M6ZZW7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Sarcosine oxidase, delta subunit family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01696</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68328.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01696"/>
    <dbReference type="EnsemblBacteria" id="CTQ68328">
        <property type="protein sequence ID" value="CTQ68328"/>
        <property type="gene ID" value="LAX5112_01696"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008115">
        <property type="term" value="F:sarcosine oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046653">
        <property type="term" value="P:tetrahydrofolate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.2270.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006279">
        <property type="entry name" value="SoxD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038561">
        <property type="entry name" value="SoxD_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04267">
        <property type="entry name" value="SoxD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ68328.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="98" mass="11188" checksum="DE07E6DB3F766B55" modified="2015-12-09" version="1">MIRIPCPFCGRRDHSEFTYGGDGSIEYPALDAPKEAWHDAVFLRDNICGVQLETWQHVHGCRMWLLIERDTLTHEIHSVRPAHPGLAAMFETDQEAGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0J4</accession>
    <name>A0A0M7A0J4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Succinyl-CoA:(R)-benzylsuccinate CoA-transferase subunit BbsF</fullName>
            <ecNumber evidence="1">2.8.3.15</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">bbsF_1</name>
        <name evidence="1" type="ORF">LAX5112_01341</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.8.3.15" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67343.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671157.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01341"/>
    <dbReference type="EnsemblBacteria" id="CTQ67343">
        <property type="protein sequence ID" value="CTQ67343"/>
        <property type="gene ID" value="LAX5112_01341"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033877">
        <property type="term" value="F:succinyl-CoA:(R)-benzylsuccinate CoA-transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1540.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10540">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003673">
        <property type="entry name" value="CoA-Trfase_fam_III"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044855">
        <property type="entry name" value="CoA-Trfase_III_dom3_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023606">
        <property type="entry name" value="CoA-Trfase_III_dom_1_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02515">
        <property type="entry name" value="CoA_transf_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89796">
        <property type="entry name" value="SSF89796"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67343.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="392" mass="41907" checksum="8343D8901A9E3940" modified="2015-12-09" version="1">MTAPLKGIKVVELARILAGPWIGQTLSDLGADVIKVEAPQGDDTRGWGPPFLNTEGGEAGDAAYFHSCNRGKRSITVDFRTEEGQNIVRRLVADADVLVENFKVGGLAKYGLDYESLSKVNPKLIYCSVTGFGQDGPYAHRAGYDFMIQGMGGIMDLTGDPDGAPQKIGVAFADIFTGLYGVIGVLAALRRRDETGEGEWVDMALLDAQVGVLANQALNYFVTGKTPKRLGNAHPNIVPYQVFSASDGHLIIAVGNDGQYKRLCGVLGRPELADDPKFATNAARVASRTELVAILTEETAARARDDLLAALEMEGVPAGPINSVEDVFEDKQINHREMKVDLPATDVDGGSVTSVRTPIRFKNGSLVLERAAPALGEHTAEILAELGLTDED</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0T9</accession>
    <name>A0A0M7A0T9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Putative lipoprotein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_01672</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68201.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671433.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01672"/>
    <dbReference type="EnsemblBacteria" id="CTQ68201">
        <property type="protein sequence ID" value="CTQ68201"/>
        <property type="gene ID" value="LAX5112_01672"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_repeat"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="SSF48452"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50005">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0802">TPR repeat</keyword>
    <feature type="repeat" description="TPR" evidence="1">
        <location>
            <begin position="1111"/>
            <end position="1144"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="318"/>
            <end position="443"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="533"/>
            <end position="570"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="599"/>
            <end position="629"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1415"/>
            <end position="1436"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="164"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="416"/>
            <end position="436"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="542"/>
            <end position="557"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00339"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ68201.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="1436" mass="157043" checksum="C33CDC6C45FB02C7" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0W6</accession>
    <name>A0A0M7A0W6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 6">Flagellar P-ring protein</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5 6">Basal body P-ring protein</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="primary">flgI_1</name>
        <name evidence="6" type="synonym">flgI</name>
        <name evidence="7" type="ORF">LAX5112_01683</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 6">Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">The basal body constitutes a major portion of the flagellar organelle and consists of four rings (L,P,S, and M) mounted on a central rod.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 6">Bacterial flagellum basal body</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the FlgI family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68231.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01683"/>
    <dbReference type="EnsemblBacteria" id="CTQ68231">
        <property type="protein sequence ID" value="CTQ68231"/>
        <property type="gene ID" value="LAX5112_01683"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009428">
        <property type="term" value="C:bacterial-type flagellum basal body, distal rod, P ring"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030288">
        <property type="term" value="C:outer membrane-bounded periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005198">
        <property type="term" value="F:structural molecule activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071973">
        <property type="term" value="P:bacterial-type flagellum-dependent cell motility"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00416">
        <property type="entry name" value="FlgI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001782">
        <property type="entry name" value="Flag_FlgI"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30381">
        <property type="entry name" value="PTHR30381"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02119">
        <property type="entry name" value="FlgI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01010">
        <property type="entry name" value="FLGPRINGFLGI"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6" id="KW-0975">Bacterial flagellum</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002591"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00019515"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023143"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00032344"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00416"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ68231.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="381" mass="39948" checksum="491113067A52B59C" modified="2015-12-09" version="1">MRRLITYFENRATRVTLVAAALVGLQLAIAVQAVASSRIKDIADFEGIRENQLIGYGLVVGLNGTGDSLNNTPFTQQSLQAMLERLGVNTRNIPLNTDTVAAVMVTANLPPFSTQGTRIDVSVSALGDASSLQGGTLLVTPLVGADGEVYAIAQGSVAIGGFSAQGDAASIVRGVPTAGRIANGGLVERELDFKLASLTRVRLALRNPDLTTARRVALSINELIGMPTAEPVDPATVQLELPRQYDGNIVDLLTDIEQLIVEPDLAARVIIDENSGIIVMGQDVKVSMVAVAQGNLTVTIAETPEVVQPLPFANGQTAIAPRTDLNVNTDPDAKLAIVPNTVTLKQLVDGLNALGIGPRDMISILQAIKASGALQAEIEVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="36" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A187</accession>
    <name>A0A0M7A187_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6 8">DNA-directed RNA polymerase subunit beta</fullName>
            <shortName evidence="6">RNAP subunit beta</shortName>
            <ecNumber evidence="6 8">2.7.7.6</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">RNA polymerase subunit beta</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">Transcriptase subunit beta</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6 15" type="primary">rpoB</name>
        <name evidence="15" type="ORF">LAX5112_01717</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6 8">DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5 6 8">
            <text>a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate + RNA(n+1)</text>
            <dbReference type="Rhea" id="RHEA:21248"/>
            <dbReference type="Rhea" id="RHEA-COMP:14527"/>
            <dbReference type="Rhea" id="RHEA-COMP:17342"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:61557"/>
            <dbReference type="ChEBI" id="CHEBI:140395"/>
            <dbReference type="EC" id="2.7.7.6"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="6 8">The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6 7">Belongs to the RNA polymerase beta chain family.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.6" evidence="6 8"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68377.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671475.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01717"/>
    <dbReference type="EnsemblBacteria" id="CTQ68377">
        <property type="protein sequence ID" value="CTQ68377"/>
        <property type="gene ID" value="LAX5112_01717"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000428">
        <property type="term" value="C:DNA-directed RNA polymerase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003899">
        <property type="term" value="F:DNA-directed 5'-3' RNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032549">
        <property type="term" value="F:ribonucleoside binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006351">
        <property type="term" value="P:transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00653">
        <property type="entry name" value="RNA_pol_B_RPB2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.270.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1110.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01321">
        <property type="entry name" value="RNApol_bact_RpoB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042107">
        <property type="entry name" value="DNA-dir_RNA_pol_bsu_ext_1_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019462">
        <property type="entry name" value="DNA-dir_RNA_pol_bsu_external_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015712">
        <property type="entry name" value="DNA-dir_RNA_pol_su2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007120">
        <property type="entry name" value="DNA-dir_RNAP_su2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037033">
        <property type="entry name" value="DNA-dir_RNAP_su2_hyb_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010243">
        <property type="entry name" value="RNA_pol_bsu_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007121">
        <property type="entry name" value="RNA_pol_bsu_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007644">
        <property type="entry name" value="RNA_pol_bsu_protrusion"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007642">
        <property type="entry name" value="RNA_pol_Rpb2_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037034">
        <property type="entry name" value="RNA_pol_Rpb2_2_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007645">
        <property type="entry name" value="RNA_pol_Rpb2_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007641">
        <property type="entry name" value="RNA_pol_Rpb2_7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014724">
        <property type="entry name" value="RNA_pol_RPB2_OB-fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20856">
        <property type="entry name" value="PTHR20856"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04563">
        <property type="entry name" value="RNA_pol_Rpb2_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04561">
        <property type="entry name" value="RNA_pol_Rpb2_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04565">
        <property type="entry name" value="RNA_pol_Rpb2_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10385">
        <property type="entry name" value="RNA_pol_Rpb2_45"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00562">
        <property type="entry name" value="RNA_pol_Rpb2_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04560">
        <property type="entry name" value="RNA_pol_Rpb2_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02013">
        <property type="entry name" value="rpoB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01166">
        <property type="entry name" value="RNA_POL_BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 6 8" id="KW-0240">DNA-directed RNA polymerase</keyword>
    <keyword evidence="3 6 8" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6 8" id="KW-0804">Transcription</keyword>
    <keyword evidence="2 6 8" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="RNA_pol_Rpb2_1" evidence="12">
        <location>
            <begin position="27"/>
            <end position="507"/>
        </location>
    </feature>
    <feature type="domain" description="RNA_pol_Rpb2_2" evidence="11">
        <location>
            <begin position="179"/>
            <end position="232"/>
        </location>
    </feature>
    <feature type="domain" description="RNA_pol_Rpb2_2" evidence="11">
        <location>
            <begin position="364"/>
            <end position="464"/>
        </location>
    </feature>
    <feature type="domain" description="RNA_pol_Rpb2_3" evidence="13">
        <location>
            <begin position="523"/>
            <end position="591"/>
        </location>
    </feature>
    <feature type="domain" description="RNA_pol_Rpb2_45" evidence="14">
        <location>
            <begin position="601"/>
            <end position="666"/>
        </location>
    </feature>
    <feature type="domain" description="RNA_pol_Rpb2_6" evidence="9">
        <location>
            <begin position="728"/>
            <end position="1286"/>
        </location>
    </feature>
    <feature type="domain" description="RNA_pol_Rpb2_7" evidence="10">
        <location>
            <begin position="1288"/>
            <end position="1362"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00024550"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01321"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU000434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU363031"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF00562"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF04560"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF04561"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF04563"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF04565"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF10385"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="CTQ68377.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="1379" mass="154199" checksum="EAB485E309D50168" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1I0</accession>
    <name>A0A0M7A1I0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6 7 9">50S ribosomal protein L16</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7 11" type="primary">rplP</name>
        <name evidence="11" type="ORF">LAX5112_01733</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7 9">Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7 9">Part of the 50S ribosomal subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 7 8">Belongs to the universal ribosomal protein uL16 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68421.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008194866.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01733"/>
    <dbReference type="EnsemblBacteria" id="CTQ68421">
        <property type="protein sequence ID" value="CTQ68421"/>
        <property type="gene ID" value="LAX5112_01733"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01433">
        <property type="entry name" value="Ribosomal_L16_L10e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1170.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01342">
        <property type="entry name" value="Ribosomal_L16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016180">
        <property type="entry name" value="Ribosomal_L10e/L16"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036920">
        <property type="entry name" value="Ribosomal_L10e/L16_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000114">
        <property type="entry name" value="Ribosomal_L16"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020798">
        <property type="entry name" value="Ribosomal_L16_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12220">
        <property type="entry name" value="PTHR12220"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00252">
        <property type="entry name" value="Ribosomal_L16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00060">
        <property type="entry name" value="RIBOSOMALL16"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54686">
        <property type="entry name" value="SSF54686"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01164">
        <property type="entry name" value="rplP_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00586">
        <property type="entry name" value="RIBOSOMAL_L16_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00701">
        <property type="entry name" value="RIBOSOMAL_L16_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 7 8" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="4 7 8" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="7 9" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="3 7 9" id="KW-0699">rRNA-binding</keyword>
    <keyword evidence="2 7 9" id="KW-0820">tRNA-binding</keyword>
    <feature type="domain" description="Ribosomal_L16" evidence="10">
        <location>
            <begin position="4"/>
            <end position="132"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00029546"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01342"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU004413"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU004414"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF00252"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ68421.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="137" mass="15511" checksum="658887E1E2EE7251" modified="2015-12-09" version="1">MLQPKRTKFRKQHKGRIHGLSKGGTDLNFGAFGLKALEPERVTARQIEAARRAMTRHMKRAGRVWIRIFPDLPVSSKPAEVRMGKGKGSPDYWACRVKPGRIMFEIDGVSEDVAREAMRLAAAKLPIKCRFVQRIGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1I8</accession>
    <name>A0A0M7A1I8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 3">50S ribosomal protein L24</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3 6" type="primary">rplX</name>
        <name evidence="6" type="ORF">LAX5112_01737</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.</text>
    </comment>
    <comment type="function">
        <text evidence="3">One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">Part of the 50S ribosomal subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 3 4">Belongs to the universal ribosomal protein uL24 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68431.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008192202.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01737"/>
    <dbReference type="EnsemblBacteria" id="CTQ68431">
        <property type="protein sequence ID" value="CTQ68431"/>
        <property type="gene ID" value="LAX5112_01737"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd06089">
        <property type="entry name" value="KOW_RPL26"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01326_B">
        <property type="entry name" value="Ribosomal_L24_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005824">
        <property type="entry name" value="KOW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041988">
        <property type="entry name" value="KOW_RPL26/RPL24"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014722">
        <property type="entry name" value="Rib_L2_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003256">
        <property type="entry name" value="Ribosomal_L24"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005825">
        <property type="entry name" value="Ribosomal_L24/26_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008991">
        <property type="entry name" value="Translation_prot_SH3-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12903">
        <property type="entry name" value="PTHR12903"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00467">
        <property type="entry name" value="KOW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17136">
        <property type="entry name" value="ribosomal_L24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00739">
        <property type="entry name" value="KOW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50104">
        <property type="entry name" value="SSF50104"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01079">
        <property type="entry name" value="rplX_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01108">
        <property type="entry name" value="RIBOSOMAL_L24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3 4" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="3" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="3" id="KW-0699">rRNA-binding</keyword>
    <feature type="domain" description="KOW" evidence="5">
        <location>
            <begin position="4"/>
            <end position="31"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00029550"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01326"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM00739"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ68431.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="105" mass="11245" checksum="CF97DB12836E6080" modified="2015-12-09" version="1">MAAKIKKGDTVVVLTGRDKGKSGEVIQMLPSDNKALVRGINMVRRHQKQTQSQEAGIVSKEAPIHLSNIALADPKDGKATRVGFKVQDDGAKVRVAKRSGDLIDG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A203</accession>
    <name>A0A0M7A203_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Cupin domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01813</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68627.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671532.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01813"/>
    <dbReference type="EnsemblBacteria" id="CTQ68627">
        <property type="protein sequence ID" value="CTQ68627"/>
        <property type="gene ID" value="LAX5112_01813"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013096">
        <property type="entry name" value="Cupin_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07883">
        <property type="entry name" value="Cupin_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cupin_2" evidence="1">
        <location>
            <begin position="35"/>
            <end position="105"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68627.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="128" mass="14146" checksum="C1DF5ABCDA8EBACC" modified="2015-12-09" version="1">MKTTKLPVNPDAKSPAGAEIRFIMDGDTGNMIHSTVPSGQINKATRHKTVSEFWHVLEGRCQIWRAREGREETVVLEAGVSIDIPVGTAFQYRCDGDQPLKFICISMPPWPGDSEAEPVKGIWKPTIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A295</accession>
    <name>A0A0M7A295_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">50S ribosomal protein L2</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6 9" type="primary">rplB</name>
        <name evidence="9" type="ORF">LAX5112_01729</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Part of the 50S ribosomal subunit. Forms a bridge to the 30S subunit in the 70S ribosome.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the universal ribosomal protein uL2 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68410.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008189054.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01729"/>
    <dbReference type="EnsemblBacteria" id="CTQ68410">
        <property type="protein sequence ID" value="CTQ68410"/>
        <property type="gene ID" value="LAX5112_01729"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015934">
        <property type="term" value="C:large ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.950.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01320_B">
        <property type="entry name" value="Ribosomal_L2_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022666">
        <property type="entry name" value="Rbsml_prot_L2_RNA-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014722">
        <property type="entry name" value="Rib_L2_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002171">
        <property type="entry name" value="Ribosomal_L2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005880">
        <property type="entry name" value="Ribosomal_L2_bac/org-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022669">
        <property type="entry name" value="Ribosomal_L2_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022671">
        <property type="entry name" value="Ribosomal_L2_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014726">
        <property type="entry name" value="Ribosomal_L2_dom3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008991">
        <property type="entry name" value="Translation_prot_SH3-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13691">
        <property type="entry name" value="PTHR13691"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00181">
        <property type="entry name" value="Ribosomal_L2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03947">
        <property type="entry name" value="Ribosomal_L2_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002158">
        <property type="entry name" value="Ribosomal_L2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01383">
        <property type="entry name" value="Ribosomal_L2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01382">
        <property type="entry name" value="Ribosomal_L2_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50104">
        <property type="entry name" value="SSF50104"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01171">
        <property type="entry name" value="rplB_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00467">
        <property type="entry name" value="RIBOSOMAL_L2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 6" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="4 6" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="3 6" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="2 6" id="KW-0699">rRNA-binding</keyword>
    <feature type="domain" description="Ribosomal_L2_C" evidence="8">
        <location>
            <begin position="124"/>
            <end position="252"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="33"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="225"/>
            <end position="277"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="38"/>
            <end position="57"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005636"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01320"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="SMART" id="SM01382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ68410.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="277" mass="30409" checksum="204D63E76AA757EB" modified="2015-12-09" version="1">MALKTFNPTSPGRRQLVQVDRAGLWKGKPVKTLTEGLSKKGGRNNTGRITSPNRSGGHKRTYRLVDFKRRKWDVPATVERLEYDPNRTAFIALIRYEDGELSYILAPQRLSEGDTVVAGENVDVKPGNAAPLSRIPVGTIVHNIELKPGKGAQIARSAGAFVQIVGRDQGYTTLRLMSGEQRRVLGTCMATIGAVSNPDHSNVNLGKAGRSRWLGIKPHVRGVAMNPIDHPHGGGEGRTSGGRHPVTPWGKPTKGKRTRKNKQTDKFIVRSRHARKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A299</accession>
    <name>A0A0M7A299_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">SOUL heme-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01789</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68566.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ68566">
        <property type="protein sequence ID" value="CTQ68566"/>
        <property type="gene ID" value="LAX5112_01789"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0110165">
        <property type="term" value="C:cellular anatomical entity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.80.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011256">
        <property type="entry name" value="Reg_factor_effector_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006917">
        <property type="entry name" value="SOUL_haem-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11220">
        <property type="entry name" value="PTHR11220"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04832">
        <property type="entry name" value="SOUL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55136">
        <property type="entry name" value="SSF55136"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ68566.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="193" mass="21570" checksum="DE9CEA5012E1EB43" modified="2015-12-09" version="1">MVRANHDRATLQQPVHELLQEHSQFEIRHYQAAGAVRIIESNGRSAATRNGFNALYSYITGNNEDRHHYDMTAPVLQRACSTIRGSQHLGDKGDLMGGDWEMFFFLPDGVDAASAAEPVNTRIEATTLGERKVAVRRFSGRWSDQNFADEAMHLLASLTENGFTTTGPVSFAFYDAPSVHPAKRYNEVQIEVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2T0</accession>
    <name>A0A0M7A2T0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Anthranilate 1,2-dioxygenase large subunit</fullName>
            <ecNumber evidence="7">1.14.12.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">antA</name>
        <name evidence="7" type="ORF">LAX5112_01934</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.14.12.1" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68917.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671625.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01934"/>
    <dbReference type="EnsemblBacteria" id="CTQ68917">
        <property type="protein sequence ID" value="CTQ68917"/>
        <property type="gene ID" value="LAX5112_01934"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051537">
        <property type="term" value="F:2 iron, 2 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018618">
        <property type="term" value="F:anthranilate 1,2-dioxygenase (deaminating, decarboxylating) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.102.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017941">
        <property type="entry name" value="Rieske_2Fe-2S"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036922">
        <property type="entry name" value="Rieske_2Fe-2S_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015879">
        <property type="entry name" value="Ring_hydroxy_dOase_asu_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001663">
        <property type="entry name" value="Rng_hydr_dOase-A"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43756">
        <property type="entry name" value="PTHR43756"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00355">
        <property type="entry name" value="Rieske"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00848">
        <property type="entry name" value="Ring_hydroxyl_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00090">
        <property type="entry name" value="RNGDIOXGNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50022">
        <property type="entry name" value="SSF50022"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51296">
        <property type="entry name" value="RIESKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0001">2Fe-2S</keyword>
    <keyword evidence="7" id="KW-0223">Dioxygenase</keyword>
    <keyword evidence="4" id="KW-0408">Iron</keyword>
    <keyword evidence="5" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3 7" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Rieske" evidence="6">
        <location>
            <begin position="43"/>
            <end position="149"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022714"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51296"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ68917.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="411" mass="46031" checksum="12BD9EBB1A7FB6D2" modified="2015-12-09" version="1">MHSDADILSLLMSRTPGYSLPQAFYADEDVFQADMKHIWHKEWVFAITSAELPKTGNYVTLEIGAYSIIIVRGADGQVRSFHNSCRHRGSRICSASKGSSPKLVCPYHQWTYELDGKLLWAREMGEDFKPENHGLKPVHCADVSGMVFICLADVAPDISDLKAQASRYLGPHDLSNLKVAHQSTITEKANWKLVLENNRECYHCSGSHPSLCRTFSDDPNLVGGDDSSSSNVGLAHVDRCEKAGLPAKYVINDGEQWRFVRIPFLGDAVSYTMDGKAAVSRRVGSVPFDNAGTCLFFHYPNTWNHFLSDSVLTFSVLPVGPMETRVTTTWLVHKDAQEGVDYDLKRLTEVWVHTNDEDRQIVEENQIGINSPAYEPGPYSPVQESGVIQFVDWYAQTLEKGLVRRFRVAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2V3</accession>
    <name>A0A0M7A2V3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uracil DNA glycosylase superfamily protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01928</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68901.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01928"/>
    <dbReference type="EnsemblBacteria" id="CTQ68901">
        <property type="protein sequence ID" value="CTQ68901"/>
        <property type="gene ID" value="LAX5112_01928"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.470.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005122">
        <property type="entry name" value="Uracil-DNA_glycosylase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036895">
        <property type="entry name" value="Uracil-DNA_glycosylase-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03167">
        <property type="entry name" value="UDG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52141">
        <property type="entry name" value="SSF52141"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="UDG" evidence="1">
        <location>
            <begin position="7"/>
            <end position="124"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68901.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="138" mass="15568" checksum="AFFA867F958E203E" modified="2015-12-09" version="1">MGIGENVFYDPDLLAIVPMGFCFPGLDAKGGDLPPRPECRKVWHDRLFAAMPQIELILVIGQYAQAYHLGKARKGSLTETVAAWKTYFQESGQSNRPLVLPLPHPSWRNNAWLKKNAWFEAELLPVLQKEIARLLGRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3I1</accession>
    <name>A0A0M7A3I1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">RNA polymerase-binding transcription factor DksA</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">dksA_1</name>
        <name evidence="5" type="synonym">dksA</name>
        <name evidence="9" type="ORF">LAX5112_01681</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Interacts directly with the RNA polymerase.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the DksA family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68224.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008193624.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01681"/>
    <dbReference type="EnsemblBacteria" id="CTQ68224">
        <property type="protein sequence ID" value="CTQ68224"/>
        <property type="gene ID" value="LAX5112_01681"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010468">
        <property type="term" value="P:regulation of gene expression"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00926">
        <property type="entry name" value="DksA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012784">
        <property type="entry name" value="DksA_RNA_pol-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037187">
        <property type="entry name" value="DnaK_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000962">
        <property type="entry name" value="Znf_DskA_TraR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020458">
        <property type="entry name" value="Znf_DskA_TraR_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01258">
        <property type="entry name" value="zf-dskA_traR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF109635">
        <property type="entry name" value="SSF109635"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02420">
        <property type="entry name" value="dksA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01102">
        <property type="entry name" value="ZF_DKSA_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51128">
        <property type="entry name" value="ZF_DKSA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2 5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0862">Zinc</keyword>
    <keyword evidence="3 5" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="DksA C4-type" evidence="8">
        <location>
            <begin position="57"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="dksA C4-type" evidence="6">
        <location>
            <begin position="100"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="48"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="54"/>
            <end position="69"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00926"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00510"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ68224.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="138" mass="16072" checksum="7CF893BB18257D75" modified="2015-12-09" version="1">MTVDIESEYRPSEDEPFMNDRQREYFKNKLLAWKGEILKESAETLATLQEESQNHPDLADRASSETDRSIELRARDRQRKLISKIDAALERIADGSYGYCEETGEPIALRRLEARPIATLSIEAQEAHERREKVYRDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3M8</accession>
    <name>A0A0M7A3M8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01978</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ69026.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008197122.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ69026">
        <property type="protein sequence ID" value="CTQ69026"/>
        <property type="gene ID" value="LAX5112_01978"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ69026.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="99" mass="10700" checksum="9941565948F77CAD" modified="2015-12-09" version="1">MNTKALTLAAAAFCVGYVGEVKIDDVRSGSPITISVSEADAQTATRNAARRTARRTSRRVNRRQNISGCSPYNAYYNCGGVYYQAVTENGTTVYVVVNP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A454</accession>
    <name>A0A0M7A454_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7 13 15">tRNA (guanine-N(1)-)-methyltransferase</fullName>
            <ecNumber evidence="6 13 15">2.1.1.228</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="13">M1G-methyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="13">tRNA [GM37] methyltransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="13 17" type="primary">trmD</name>
        <name evidence="17" type="ORF">LAX5112_02052</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="18" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="18">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2 13 15">Specifically methylates guanosine-37 in various tRNAs.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 13 15">
            <text>guanosine(37) in tRNA + S-adenosyl-L-methionine = H(+) + N(1)-methylguanosine(37) in tRNA + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:36899"/>
            <dbReference type="Rhea" id="RHEA-COMP:10145"/>
            <dbReference type="Rhea" id="RHEA-COMP:10147"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:73542"/>
            <dbReference type="ChEBI" id="CHEBI:74269"/>
            <dbReference type="EC" id="2.1.1.228"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="5 13 15">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3 13 15">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 13 15">Belongs to the RNA methyltransferase TrmD family.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.228" evidence="6 13 15"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69272.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671733.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02052"/>
    <dbReference type="EnsemblBacteria" id="CTQ69272">
        <property type="protein sequence ID" value="CTQ69272"/>
        <property type="gene ID" value="LAX5112_02052"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052906">
        <property type="term" value="F:tRNA (guanine(37)-N(1))-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd18080">
        <property type="entry name" value="TrmD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1270.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1280.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00605">
        <property type="entry name" value="TrmD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029028">
        <property type="entry name" value="Alpha/beta_knot_MTases"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002649">
        <property type="entry name" value="tRNA_m1G_MeTrfase_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023148">
        <property type="entry name" value="tRNA_m1G_MeTrfase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029026">
        <property type="entry name" value="tRNA_m1G_MTases_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016009">
        <property type="entry name" value="tRNA_MeTrfase_TRMD/TRM10"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46417">
        <property type="entry name" value="PTHR46417"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01746">
        <property type="entry name" value="tRNA_m1G_MT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000386">
        <property type="entry name" value="tRNA_mtase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75217">
        <property type="entry name" value="SSF75217"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00088">
        <property type="entry name" value="trmD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 13 15" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="9 13 15" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="11 13 14" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="10 13 15" id="KW-0808">Transferase</keyword>
    <keyword evidence="12 13 15" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="tRNA_m1G_MT" evidence="16">
        <location>
            <begin position="25"/>
            <end position="222"/>
        </location>
    </feature>
    <feature type="region of interest" description="S-adenosyl-L-methionine binding" evidence="13 14">
        <location>
            <begin position="134"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="binding site" evidence="13 14">
        <location>
            <position position="114"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001189"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00002634"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00007630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00012807"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00014679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="PIRSR" id="PIRSR000386-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="RuleBase" id="RU003464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="Pfam" id="PF01746"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="CTQ69272.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="236" mass="25862" checksum="33065BA7C1F67FF1" modified="2015-12-09" version="1">MAFKATILTLYPDMFPGPLGQSLSGRALEKGLWDIETSQIRDFAADKHRSVDDTPAGGGAGMVLRADILAKAIDAAAPVEDPRPRILMSPRGKPFTQAKAHQLAEGPGAVIVCGRFEGIDQRVIETRELEEISIGDYILSGGEIGAITMLDAIVRLIPGVMGNMESADTESFETGLLEHPHYTRPAEFEGLTIPDVLTSGNHKKIHEWRLAEAERLTRERRPDLWDAYMADDDDVD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4I4</accession>
    <name>A0A0M7A4I4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Co-chaperonin GroES</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">10 kDa chaperonin</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="3">Chaperonin-10</fullName>
            <shortName evidence="3">Cpn10</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3" type="primary">groES</name>
        <name evidence="3" type="synonym">groS</name>
        <name evidence="5" type="ORF">LAX5112_02308</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3 4">Together with the chaperonin GroEL, plays an essential role in assisting protein folding. The GroEL-GroES system forms a nano-cage that allows encapsulation of the non-native substrate proteins and provides a physical environment optimized to promote and accelerate protein folding. GroES binds to the apical surface of the GroEL ring, thereby capping the opening of the GroEL channel.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">Heptamer of 7 subunits arranged in a ring. Interacts with the chaperonin GroEL.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 3 4">Belongs to the GroES chaperonin family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ69978.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008195263.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02308"/>
    <dbReference type="EnsemblBacteria" id="CTQ69978">
        <property type="protein sequence ID" value="CTQ69978"/>
        <property type="gene ID" value="LAX5112_02308"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140662">
        <property type="term" value="F:ATP-dependent protein folding chaperone"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00320">
        <property type="entry name" value="cpn10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.33.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00580">
        <property type="entry name" value="CH10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020818">
        <property type="entry name" value="Chaperonin_GroES"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037124">
        <property type="entry name" value="Chaperonin_GroES_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018369">
        <property type="entry name" value="Chaprnonin_Cpn10_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011032">
        <property type="entry name" value="GroES-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10772">
        <property type="entry name" value="PTHR10772"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00166">
        <property type="entry name" value="Cpn10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00297">
        <property type="entry name" value="CHAPERONIN10"/>
    </dbReference>
    <dbReference type="SMART" id="SM00883">
        <property type="entry name" value="Cpn10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50129">
        <property type="entry name" value="SSF50129"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00681">
        <property type="entry name" value="CHAPERONINS_CPN10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3 4" id="KW-0143">Chaperone</keyword>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00580"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU000535"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ69978.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="95" mass="10204" checksum="6FF558CD200327A4" modified="2015-12-09" version="1">MAFRPLHDRVVVRRVDSEEKTAGGIIIPDTAKEKPQEGEIVAVGNGARDDSGNVVALDVKAGDRVLFGKWSGTEVKIDGEDLLIMKESDIMGVIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4U5</accession>
    <name>A0A0M7A4U5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Isonitrile hydratase</fullName>
            <ecNumber evidence="2">4.2.1.103</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">inhA_1</name>
        <name evidence="2" type="ORF">LAX5112_02055</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="4.2.1.103" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69280.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671908.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02055"/>
    <dbReference type="EnsemblBacteria" id="CTQ69280">
        <property type="protein sequence ID" value="CTQ69280"/>
        <property type="gene ID" value="LAX5112_02055"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050549">
        <property type="term" value="F:cyclohexyl-isocyanide hydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002818">
        <property type="entry name" value="DJ-1/PfpI"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01965">
        <property type="entry name" value="DJ-1_PfpI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="SSF52317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DJ-1_PfpI" evidence="1">
        <location>
            <begin position="7"/>
            <end position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01965"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69280.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="222" mass="23596" checksum="4688F438D0DDF365" modified="2015-12-09" version="1">MTLSFGILIFPNVQLLDVAGPNDAFAAVPGANVHLIWKNRDLVTTTSGMEIRANTTFSECPKLDVLCIPGGGGVNPLLQDDEVLEFVRRAAASTRYVTSVCTGSLVLGRAGLLNGKRATSHWNAVDFLPQLGAIPVQERVVKDGTLYTAGGITSGIDFGLEILADLLGKEEAKTVQLALEYAPAPPFSSGTPEDAAPEIIAEARRRMAHSRQERLALFGAPV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4Y1</accession>
    <name>A0A0M7A4Y1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Isoquinoline 1-oxidoreductase subunit beta</fullName>
            <ecNumber evidence="2">1.3.99.16</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">iorB_1</name>
        <name evidence="2" type="ORF">LAX5112_02131</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.3.99.16" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69486.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671789.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02131"/>
    <dbReference type="EnsemblBacteria" id="CTQ69486">
        <property type="protein sequence ID" value="CTQ69486"/>
        <property type="gene ID" value="LAX5112_02131"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047121">
        <property type="term" value="F:isoquinoline 1-oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000674">
        <property type="entry name" value="Ald_Oxase/Xan_DH_a/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008274">
        <property type="entry name" value="AldOxase/xan_DH_Mopterin-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037165">
        <property type="entry name" value="AldOxase/xan_DH_Mopterin-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012368">
        <property type="entry name" value="OxRdtase_Mopterin-bd_su_IorB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006311">
        <property type="entry name" value="TAT_signal"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02738">
        <property type="entry name" value="Ald_Xan_dh_C2"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF036389">
        <property type="entry name" value="IOR_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01008">
        <property type="entry name" value="Ald_Xan_dh_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56003">
        <property type="entry name" value="SSF56003"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ald_Xan_dh_C" evidence="1">
        <location>
            <begin position="213"/>
            <end position="291"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM01008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69486.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="732" mass="78867" checksum="2ABF4AB83D1D408D" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A519</accession>
    <name>A0A0M7A519_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02312</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ69989.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02312"/>
    <dbReference type="EnsemblBacteria" id="CTQ69989">
        <property type="protein sequence ID" value="CTQ69989"/>
        <property type="gene ID" value="LAX5112_02312"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="170"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="186"/>
            <end position="203"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69989.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="260" mass="27322" checksum="42D6411E23C291BA" modified="2015-12-09" version="1">MPTSGQSLRSEPFEGGPTTTDISPSIQGPLLSGGQGGTGTAKASRSKPGQTDLRPRADAVLGSLKNILNSPEFKSAPQLQAFLHFVVDAALNDQTEKLKGITIAVEALGRDANFDPDKDPIVRVEAARLRSRLSKYYEGSGASDQVRISIPKGGYAPAFEFANMKATHGVPASATAHHDDPPAEKLSTAPTTSDTSSASSAHSGIEELPGPYDLPKTAHLRLPSARKLLKNAVSRPQISIGWLLVTNAVCLAAGYWVGSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A548</accession>
    <name>A0A0M7A548_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">AAA_28 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02089</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69370.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671759.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02089"/>
    <dbReference type="EnsemblBacteria" id="CTQ69370">
        <property type="protein sequence ID" value="CTQ69370"/>
        <property type="gene ID" value="LAX5112_02089"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038727">
        <property type="entry name" value="NadR/Ttd14_AAA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13521">
        <property type="entry name" value="AAA_28"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA_28" evidence="1">
        <location>
            <begin position="2"/>
            <end position="151"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13521"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69370.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="184" mass="20399" checksum="867690BCF59B74DB" modified="2015-12-09" version="1">MRIAVTGTHGTGKTTLIEDFAALKPEYHPVPEPYFELLQKGHSFSDPPTIDDFSSQLDQNIRTVLETKSDDKVLFDRCPFDLIAYLEVLSEQGGEEWVPSGRLLQKIEAALQSLDLIVFLPIGSRDGTGQNAEMQQLRSAVDEQLKQILQEDSLGLITEALAILELTGSPQDRLQALAGHCTHR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5C3</accession>
    <name>A0A0M7A5C3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Spermidine/putrescine import ATP-binding protein PotA</fullName>
            <ecNumber evidence="8">3.6.3.31</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">potA_2</name>
        <name evidence="8" type="ORF">LAX5112_02206</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.31" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69672.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671844.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ69672">
        <property type="protein sequence ID" value="CTQ69672"/>
        <property type="gene ID" value="LAX5112_02206"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008995">
        <property type="entry name" value="Mo/tungstate-bd_C_term_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013611">
        <property type="entry name" value="Transp-assoc_OB_typ2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08402">
        <property type="entry name" value="TOBE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50331">
        <property type="entry name" value="SSF50331"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ABC transporter" evidence="7">
        <location>
            <begin position="3"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="36"/>
            <end position="43"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ69672.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="347" mass="37025" checksum="5AF4C111F7D4DB45" modified="2015-12-09" version="1">MTLTIENAAKTFADGTRALCSTNLTVAPGEILSLLGPSGCGKTTLLRIIAGLERPDAGSRILFGGTDVTGLAAEHRNVGMVFQSYALFPNMSVRANVGYGLKVRKVPAEERRQRVDEVLRLCRLTDYADRPPHALSGGQRQRVALARAVAPRPSILLLDEPLSALDAALRDNLRDELAAMLRQFRITAVFVTHDQSEAMAIADRIGVMSSGTMLQVGRPEELYHAPDNAFVARFIGNAMPLAGRLENGVLQLPGGRLPLPAAAAGKTVYIRPENIRLDQTGPLSGTVETVTFSGGHYRLAVGGILPGAGLLFLQHPGRTAPETGSTVRLTIDPSDLIFLADQAPAHS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5H3</accession>
    <name>A0A0M7A5H3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Neu5Ac permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">siaT_14</name>
        <name evidence="5" type="ORF">LAX5112_01918</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68874.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671610.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01918"/>
    <dbReference type="EnsemblBacteria" id="CTQ68874">
        <property type="protein sequence ID" value="CTQ68874"/>
        <property type="gene ID" value="LAX5112_01918"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010656">
        <property type="entry name" value="DctM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004681">
        <property type="entry name" value="TRAP_DctM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33362">
        <property type="entry name" value="PTHR33362"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06808">
        <property type="entry name" value="DctM"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="6"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="59"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="92"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="121"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="150"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="198"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="242"/>
            <end position="264"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="270"/>
            <end position="285"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="290"/>
            <end position="308"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="328"/>
            <end position="350"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="362"/>
            <end position="383"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="403"/>
            <end position="434"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="446"/>
            <end position="472"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="492"/>
            <end position="513"/>
        </location>
    </feature>
    <feature type="domain" description="DctM" evidence="4">
        <location>
            <begin position="14"/>
            <end position="285"/>
        </location>
    </feature>
    <feature type="domain" description="DctM" evidence="4">
        <location>
            <begin position="323"/>
            <end position="509"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF06808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ68874.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="519" mass="53779" checksum="5332F303FDDD8165" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5I4</accession>
    <name>A0A0M7A5I4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Copper binding periplasmic protein CusF</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02211</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69686.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02211"/>
    <dbReference type="EnsemblBacteria" id="CTQ69686">
        <property type="protein sequence ID" value="CTQ69686"/>
        <property type="gene ID" value="LAX5112_02211"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.320">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021647">
        <property type="entry name" value="CusF_Ec"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042230">
        <property type="entry name" value="CusF_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11604">
        <property type="entry name" value="CusF_Ec"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809459" evidence="1">
        <location>
            <begin position="27"/>
            <end position="145"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69686.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="145" mass="15194" checksum="63227055D759E64A" modified="2015-12-09" version="1">MKSFPITASTAFAGLLMLLTLTSADAVVDTPQASFEMDHASLEIAGAQIVGALHLEGVINAMSEDVINISHEANDRIGWPAMKMDLPLAPYAKIMPGIRPGASVTLMLTLGKTGSYRIAAIVPGSPEKISNAKSDDPMGIEKSPC</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5T9</accession>
    <name>A0A0M7A5T9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase</fullName>
            <ecNumber evidence="2">3.6.1.63</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">phnM_2</name>
        <name evidence="2" type="ORF">LAX5112_02182</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.6.1.63" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69610.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671824.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02182"/>
    <dbReference type="EnsemblBacteria" id="CTQ69610">
        <property type="protein sequence ID" value="CTQ69610"/>
        <property type="gene ID" value="LAX5112_02182"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016810">
        <property type="term" value="F:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019700">
        <property type="term" value="P:organic phosphonate catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01306">
        <property type="entry name" value="PhnM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.40.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013108">
        <property type="entry name" value="Amidohydro_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011059">
        <property type="entry name" value="Metal-dep_hydrolase_composite"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032466">
        <property type="entry name" value="Metal_Hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012696">
        <property type="entry name" value="PhnM"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07969">
        <property type="entry name" value="Amidohydro_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF038971">
        <property type="entry name" value="PhnM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51338">
        <property type="entry name" value="SSF51338"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51556">
        <property type="entry name" value="SSF51556"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02318">
        <property type="entry name" value="phosphono_phnM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Amidohydro_3" evidence="1">
        <location>
            <begin position="173"/>
            <end position="363"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07969"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69610.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="385" mass="41715" checksum="458B5B726C4E0DB2" modified="2015-12-09" version="1">MSTHPKLFKNTKLVLAEDVINGSLTVNQDGLISDIGSATEAEGHDCEGDFLLPGLIELHTDHLEVHYAPRPKVRWNPVAAVQAHDAQIACAGITTVFDALRVGMDEDDDSNDTMKVADMRALADAIETGQKENRLRADHYIHLRCEVSAPDVIRAYNYFDGDDRVRLVSLMDHTPGQRQFVSLDSYISYYQGKRGFTDEQMAEFIEMRKARADKNTPGNRKAIAAHADKNTIAIASHDDATIAHVDEAISLNTKIAEFPTTVEAAKASHEAGMAVLMGAPNVVRGGSHSGNVSARELAEAGYLDVLSSDYIPASLLQAAFQLADEIDGITLPKAVSTVTSTPAKAIGLSDRGVLEPGKRADLIQVKLVGNVPIVRGVWREGRRVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5V3</accession>
    <name>A0A0M7A5V3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative hydrophobic domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01971</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ69014.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ69014">
        <property type="protein sequence ID" value="CTQ69014"/>
        <property type="gene ID" value="LAX5112_01971"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005240">
        <property type="entry name" value="DUF389"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20992">
        <property type="entry name" value="PTHR20992"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04087">
        <property type="entry name" value="DUF389"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="34"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="64"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="96"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="133"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="162"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="202"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="241"/>
            <end position="258"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="312"/>
            <end position="339"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ69014.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="362" mass="38307" checksum="8CF5ABA590580F4D" modified="2015-12-09" version="1">MRRPIYALWFRPRPNAEPSEKTDGKELAKRMERFSVASFPFFLMLSLSAVLATLGLVANSTATVIGAMIIAPLMAPILSLAFGIATYDWPLIARSFVTVLAGTVCVVAIGYLGVMAIGARIVGPEILARTSPSMIDLAVALAAGCAGAYAQTRPSIADSIAGVAIAVALVPPLAVAGIGLALGSKASSEVGLRLDEFGLQDAGIDVAAGGALLFLTNLAGIIIVAALVFLLQNYGQWKKGLALLIVASLGGYVLVPPLNTALHEIYVKNRLLRLVNKNLEREPALGSNGTEVRIQTVNVGYRNDHLFIRVDLLADRKKLAQAQENLERFSAQLAKDIGEDVLIEVDIGAIDVMRLRALGRGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6J3</accession>
    <name>A0A0M7A6J3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 10">3-deoxy-D-manno-octulosonic acid transferase</fullName>
            <shortName evidence="10">Kdo transferase</shortName>
            <ecNumber evidence="4 10">2.4.99.12</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7 10">Lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="12" type="primary">waaA</name>
        <name evidence="12" type="ORF">LAX5112_02348</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2 10">Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP-Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 10">
            <text>CMP-3-deoxy-beta-D-manno-octulosonate + lipid IVA (E. coli) = alpha-Kdo-(2-&gt;6)-lipid IVA + CMP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:28066"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:58603"/>
            <dbReference type="ChEBI" id="CHEBI:60364"/>
            <dbReference type="ChEBI" id="CHEBI:60377"/>
            <dbReference type="ChEBI" id="CHEBI:85987"/>
            <dbReference type="EC" id="2.4.99.12"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3 10">Bacterial outer membrane biogenesis; LPS core biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="10">Cell inner membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="10">Belongs to the glycosyltransferase group 1 family.</text>
    </comment>
    <dbReference type="EC" id="2.4.99.12" evidence="4 10"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70082.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671970.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02348"/>
    <dbReference type="EnsemblBacteria" id="CTQ70082">
        <property type="protein sequence ID" value="CTQ70082"/>
        <property type="gene ID" value="LAX5112_02348"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00958"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043842">
        <property type="term" value="F:Kdo transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009244">
        <property type="term" value="P:lipopolysaccharide core region biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.11720">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007507">
        <property type="entry name" value="Glycos_transf_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038107">
        <property type="entry name" value="Glycos_transf_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039901">
        <property type="entry name" value="Kdotransferase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42755">
        <property type="entry name" value="PTHR42755"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04413">
        <property type="entry name" value="Glycos_transf_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="10" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="12" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="10" id="KW-0448">Lipopolysaccharide biosynthesis</keyword>
    <keyword evidence="10" id="KW-0472">Membrane</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 10 12" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glycos_transf_N" evidence="11">
        <location>
            <begin position="42"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="8">
        <location>
            <position position="67"/>
        </location>
    </feature>
    <feature type="site" description="Transition state stabilizer" evidence="9">
        <location>
            <position position="135"/>
        </location>
    </feature>
    <feature type="site" description="Transition state stabilizer" evidence="9">
        <location>
            <position position="211"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000183"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00003394"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004713"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012621"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00019077"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00031445"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR639901-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR639901-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU365103"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF04413"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ70082.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="439" mass="47937" checksum="7A60FF8E351EFD3C" modified="2015-12-09" version="1">MAERRPIALTLYRALGRALTPLLHLLFRRRAANGKEIEGRKGERFGVPGVPRPKGSLVWIHAASVGETMSVLPLIEQLARDGHSVLLTSVTVTAAELAEKRLPENCIHQFTPYDTPGCVSSFLDHWRPDLAMVVESEIWPCMFDEVHQRGVPFALLNGRMSESSSRNWMKAPKTSGYIFKCLDLVLAQSDADKQRFLKLGCRHVEMPGNLKFDAAEPAAEEDDRRQLADQIGDRPVWMAALTHPGEDEIALKAHARLLEEHPGLLLLLVPRHPARADDVAALVRESGHALARRSCGDPVAAETGVYLGDTLGEMGLFYRLAPVTFLGGSFNDAGGHNPVEAVLLGSALVTGPRVANARAVYKDLWEQGAALKVAEPPELASEIARLMDHPDSRKEQVDRAMNLVIMGRGALTRTADFLKPMLAGASQADIMERGDGQGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6K3</accession>
    <name>A0A0M7A6K3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative ester cyclase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02429</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70247.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672132.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02429"/>
    <dbReference type="EnsemblBacteria" id="CTQ70247">
        <property type="protein sequence ID" value="CTQ70247"/>
        <property type="gene ID" value="LAX5112_02429"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030638">
        <property type="term" value="P:polyketide metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009959">
        <property type="entry name" value="Cyclase_SnoaL-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032710">
        <property type="entry name" value="NTF2-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037401">
        <property type="entry name" value="SnoaL-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38436">
        <property type="entry name" value="PTHR38436"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12680">
        <property type="entry name" value="SnoaL_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54427">
        <property type="entry name" value="SSF54427"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SnoaL-like" evidence="1">
        <location>
            <begin position="13"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="domain" description="SnoaL-like" evidence="1">
        <location>
            <begin position="152"/>
            <end position="238"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12680"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70247.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="256" mass="27689" checksum="7C1A89535D096C68" modified="2015-12-09" version="1">MSPKELVLALLTAAFVDHDPEAAKPLLAPDYIQHNPAIPSGADGLLGAIPIVKDAGLTVTTHRVISEGDYVVFHNTYENADAFGAQSLIAFDVFRVEDGVVAEHWDNLQAPPEATVSGRSMTDGPVEVTDHDRTQENKELVVGFVRDVLGGAAPQNVTQYMDPAVYIQHNPLIGDGLNGLMKAMEEFAAQGQVITKFEPQIVVAEGNFVFVASDAVMGGEPWAFFDLWRVEAGKIVEHWDVVSPTPAEMAHDNGKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A705</accession>
    <name>A0A0M7A705_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">ATP synthase protein I</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">atpI</name>
        <name evidence="4" type="ORF">LAX5112_02409</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">A possible function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the bacterial AtpI family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70206.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008191238.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02409"/>
    <dbReference type="EnsemblBacteria" id="CTQ70206">
        <property type="protein sequence ID" value="CTQ70206"/>
        <property type="gene ID" value="LAX5112_02409"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045263">
        <property type="term" value="C:proton-transporting ATP synthase complex, coupling factor F(o)"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006811">
        <property type="term" value="P:ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016989">
        <property type="entry name" value="Atp1_alphaprobac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032820">
        <property type="entry name" value="ATPase_put"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09527">
        <property type="entry name" value="ATPase_gene1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF032126">
        <property type="entry name" value="F0F1_ATP_synthase_subunit_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0375">Hydrogen ion transport</keyword>
    <keyword evidence="1" id="KW-0406">Ion transport</keyword>
    <keyword evidence="1 3" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="64"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="89"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="14"/>
            <end position="48"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRNR" id="PIRNR032126"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ70206.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="129" mass="13916" checksum="CFD1A733CE99C348" modified="2015-12-09" version="1">MSGSSQNGNSDDPDKGASEVDLSERRNRLNRKLDGQRKAEEAERAAKKSDNSGYAQAMKLSSEFISAVVVGGGLGWFVDQWFGTKPFGLIVFLLIGFAAGVLNVMRAAGRIAEPGQRYKRESSDDDGSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A774</accession>
    <name>A0A0M7A774_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Protease TldD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">LAX5112_02352</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase U62 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70090.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671975.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02352"/>
    <dbReference type="EnsemblBacteria" id="CTQ70090">
        <property type="protein sequence ID" value="CTQ70090"/>
        <property type="gene ID" value="LAX5112_02352"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008237">
        <property type="term" value="F:metallopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.2290.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045569">
        <property type="entry name" value="Metalloprtase-TldD/E_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045570">
        <property type="entry name" value="Metalloprtase-TldD/E_cen_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002510">
        <property type="entry name" value="Metalloprtase-TldD/E_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025502">
        <property type="entry name" value="TldD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035068">
        <property type="entry name" value="TldD/PmbA_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036059">
        <property type="entry name" value="TldD/PmbA_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01523">
        <property type="entry name" value="PmbA_TldD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19289">
        <property type="entry name" value="PmbA_TldD_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19290">
        <property type="entry name" value="PmbA_TldD_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004919">
        <property type="entry name" value="TldD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF111283">
        <property type="entry name" value="SSF111283"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-0645">Protease</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PmbA_TldD" evidence="3">
        <location>
            <begin position="34"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="domain" description="PmbA_TldD_M" evidence="5">
        <location>
            <begin position="121"/>
            <end position="230"/>
        </location>
    </feature>
    <feature type="domain" description="PmbA_TldD_C" evidence="4">
        <location>
            <begin position="238"/>
            <end position="471"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005836"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01523"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF19289"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF19290"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ70090.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="474" mass="50034" checksum="261C45F5DD4756EA" modified="2015-12-09" version="1">MALSSSDLIETSGLGLETARRITKEALANADDGELFVEYRQTEGLVFDNGRLKGANYDTAQGFGLRAVAGEAAGYAHAGDISEAALKRAADAVSAVSKGYSGTYAAAPARTNLSLYTDANPLGGPSFEDKVKLLQEIDTYARAKDPRVRQVSASLAGSWQVVEILRADGHLVRDVRPMVRLSISVVAGNDDRQESGSYGCGGREGFERFITTENWQGGVDEALRQALVNLDAIPAPAGEMDVVLGPGWPGILLHEAVGHGLEGDFNRKKTSAFAGLMGERVASPGVTIVDDGTIPDRRGSLSVDDEGTPAARTVLIEDGILTGYMQDRQNARLMEMEPTGNGRRQSYAHIPMPRMTNTVMMNGDKDPEEILESVKDGIYAVSFGGGQVDITSGKFVFSCTEAYKVENGKVGAPVKGAMLIGNGPDALTRVEMIGNDMKLDPGMGTCGKQGQGVPVGVGQPSMRINAMTVGGTAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A789</accession>
    <name>A0A0M7A789_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02449</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70286.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70286">
        <property type="protein sequence ID" value="CTQ70286"/>
        <property type="gene ID" value="LAX5112_02449"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ70286.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="38" mass="4389" checksum="FFB56A4DA1B1E2E4" modified="2015-12-09" version="1">MAKSNFLSGVMFGLVPNIHHSFKNMDPRHKAEDDCREE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7L8</accession>
    <name>A0A0M7A7L8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1 2">Molybdenum cofactor biosynthesis protein B</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">moaB</name>
        <name evidence="4" type="ORF">LAX5112_02421</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">May be involved in the biosynthesis of molybdopterin.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2">Cofactor biosynthesis; molybdopterin biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the MoaB/Mog family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70230.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672129.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02421"/>
    <dbReference type="EnsemblBacteria" id="CTQ70230">
        <property type="protein sequence ID" value="CTQ70230"/>
        <property type="gene ID" value="LAX5112_02421"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00344"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006777">
        <property type="term" value="P:Mo-molybdopterin cofactor biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00886">
        <property type="entry name" value="MogA_MoaB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.980.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012245">
        <property type="entry name" value="MoaB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036425">
        <property type="entry name" value="MoaB/Mog-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001453">
        <property type="entry name" value="MoaB/Mog_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013484">
        <property type="entry name" value="MoaB_proteobac"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43232">
        <property type="entry name" value="PTHR43232"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00994">
        <property type="entry name" value="MoCF_biosynth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006443">
        <property type="entry name" value="MoaB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00852">
        <property type="entry name" value="MoCF_biosynth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53218">
        <property type="entry name" value="SSF53218"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02667">
        <property type="entry name" value="moaB_proteo"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00177">
        <property type="entry name" value="molyb_syn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0501">Molybdenum cofactor biosynthesis</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MoCF_biosynth" evidence="3">
        <location>
            <begin position="16"/>
            <end position="160"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00015262"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRNR" id="PIRNR006443"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00852"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ70230.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="185" mass="20392" checksum="FF7A08E0896902A6" modified="2015-12-09" version="1">MSRLDESRPFIPLSIAVLTVSDTRKPEDDRSGNTLVDRLEKAGHTLADRKIVADDVPAIQAIAKDWISTDGIDVIISTGGTGFTGRDVTPEAMEPLFEKKMDGFSEVFHRISYDKIGTSTIQSRATGGVAGATYIFVLPGSPGACKDAWDGILKWQLDYRHMPCNFVEIMPRLDEHLKRGKLQEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7N7</accession>
    <name>A0A0M7A7N7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Methyl-accepting chemotaxis protein 4</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">mcp4_6</name>
        <name evidence="6" type="ORF">LAX5112_02232</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the methyl-accepting chemotaxis (MCP) protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69743.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671862.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ69743">
        <property type="protein sequence ID" value="CTQ69743"/>
        <property type="gene ID" value="LAX5112_02232"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032255">
        <property type="entry name" value="HBM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004089">
        <property type="entry name" value="MCPsignal_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00015">
        <property type="entry name" value="MCPsignal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01358">
        <property type="entry name" value="HBM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00283">
        <property type="entry name" value="MA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50111">
        <property type="entry name" value="CHEMOTAXIS_TRANSDUC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0807">Transducer</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="283"/>
            <end position="303"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="5">
        <location>
            <begin position="304"/>
            <end position="357"/>
        </location>
    </feature>
    <feature type="domain" description="Methyl-accepting transducer" evidence="4">
        <location>
            <begin position="398"/>
            <end position="634"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00029447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ69743.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="654" mass="70505" checksum="AFC34304CB854315" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8P7</accession>
    <name>A0A0M7A8P7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Ribosomal RNA small subunit methyltransferase H</fullName>
            <ecNumber evidence="6">2.1.1.199</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">16S rRNA m(4)C1402 methyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">rRNA (cytosine-N(4)-)-methyltransferase RsmH</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6 8" type="primary">rsmH</name>
        <name evidence="8" type="ORF">LAX5112_02607</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>cytidine(1402) in 16S rRNA + S-adenosyl-L-methionine = H(+) + N(4)-methylcytidine(1402) in 16S rRNA + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:42928"/>
            <dbReference type="Rhea" id="RHEA-COMP:10286"/>
            <dbReference type="Rhea" id="RHEA-COMP:10287"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:74506"/>
            <dbReference type="ChEBI" id="CHEBI:82748"/>
            <dbReference type="EC" id="2.1.1.199"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the methyltransferase superfamily. RsmH family.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.199" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70776.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672190.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02607"/>
    <dbReference type="EnsemblBacteria" id="CTQ70776">
        <property type="protein sequence ID" value="CTQ70776"/>
        <property type="gene ID" value="LAX5112_02607"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071424">
        <property type="term" value="F:rRNA (cytosine-N4-)-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070475">
        <property type="term" value="P:rRNA base methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.170">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01007">
        <property type="entry name" value="16SrRNA_methyltr_H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002903">
        <property type="entry name" value="RsmH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023397">
        <property type="entry name" value="SAM-dep_MeTrfase_MraW_recog"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11265">
        <property type="entry name" value="PTHR11265"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01795">
        <property type="entry name" value="Methyltransf_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004486">
        <property type="entry name" value="MraW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81799">
        <property type="entry name" value="SSF81799"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00006">
        <property type="entry name" value="TIGR00006"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 6 8" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0698">rRNA processing</keyword>
    <keyword evidence="5 6" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="4 6 8" id="KW-0808">Transferase</keyword>
    <feature type="region of interest" description="S-adenosyl-L-methionine binding" evidence="6">
        <location>
            <begin position="47"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="300"/>
            <end position="323"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="64"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="91"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="112"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="119"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010396"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ70776.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="346" mass="37642" checksum="D004456B094D32F4" modified="2015-12-09" version="1">MMALGDKTDDLAAGGPERHVPVLLNEVLEWLDPQPGEVMVDGTFGAGGYSRKLLERDATVVGIDRDPDAIAGGQELVTQSDGRLILVPGQFADLETHARESGFDGVDGVVLDLGVSSMQLDQAERGFSFLRDGPLDMRMEQAGPSAADVVNELPVRDLIRIIGLLGEEKRAPSVAHAIDKARKEKPFSRTLELANLIEKVLGRSPKKAQIHPATRTFQALRIYVNGELHQAAQALGAAERILKPGGRLVLVSFHSLEDRIVKRFFQDRTKTRGGGSRHMPEEEVPPATFEILTRKAVEARDMETDSNPRARSAKLRAGRRTEAPARELDIHTAGVPRLAAFHGLGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9X9</accession>
    <name>A0A0M7A9X9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Acyl-CoA dehydrogenase, short-chain specific</fullName>
            <ecNumber evidence="10">1.3.8.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">LAX5112_02507</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 5">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the acyl-CoA dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.3.8.1" evidence="10"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70434.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672086.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02507"/>
    <dbReference type="EnsemblBacteria" id="CTQ70434">
        <property type="protein sequence ID" value="CTQ70434"/>
        <property type="gene ID" value="LAX5112_02507"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004085">
        <property type="term" value="F:butyryl-CoA dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.540.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025878">
        <property type="entry name" value="Acyl-CoA_dh-like_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006091">
        <property type="entry name" value="Acyl-CoA_Oxase/DH_mid-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046373">
        <property type="entry name" value="Acyl-CoA_Oxase/DH_mid-dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036250">
        <property type="entry name" value="AcylCo_DH-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009075">
        <property type="entry name" value="AcylCo_DH/oxidase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013786">
        <property type="entry name" value="AcylCoA_DH/ox_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037069">
        <property type="entry name" value="AcylCoA_DH/ox_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009100">
        <property type="entry name" value="AcylCoA_DH/oxidase_NM_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00441">
        <property type="entry name" value="Acyl-CoA_dh_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12806">
        <property type="entry name" value="Acyl-CoA_dh_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02770">
        <property type="entry name" value="Acyl-CoA_dh_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02771">
        <property type="entry name" value="Acyl-CoA_dh_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47203">
        <property type="entry name" value="SSF47203"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56645">
        <property type="entry name" value="SSF56645"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0274">FAD</keyword>
    <keyword evidence="3 5" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="5 10" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Acyl-CoA_dh_N" evidence="8">
        <location>
            <begin position="38"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="domain" description="Acyl-CoA_dh_M" evidence="7">
        <location>
            <begin position="160"/>
            <end position="267"/>
        </location>
    </feature>
    <feature type="domain" description="Acyl-CoA_dh_1" evidence="6">
        <location>
            <begin position="282"/>
            <end position="445"/>
        </location>
    </feature>
    <feature type="domain" description="Acyl-CoA_dh_C" evidence="9">
        <location>
            <begin position="470"/>
            <end position="586"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009347"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU362125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00441"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF02770"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF02771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF12806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ70434.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="593" mass="63843" checksum="7FE402F91456DDD5" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAZ1</accession>
    <name>A0A0M7AAZ1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Metallophosphoesterase, DNA ligase-associated</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03018</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72039.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672508.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03018"/>
    <dbReference type="EnsemblBacteria" id="CTQ72039">
        <property type="protein sequence ID" value="CTQ72039"/>
        <property type="gene ID" value="LAX5112_03018"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016874">
        <property type="term" value="F:ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.21.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004843">
        <property type="entry name" value="Calcineurin-like_PHP_ApaH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029052">
        <property type="entry name" value="Metallo-depent_PP-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026336">
        <property type="entry name" value="P_estr_lig_assc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024173">
        <property type="entry name" value="Pesterase_MJ0037"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00149">
        <property type="entry name" value="Metallophos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000887">
        <property type="entry name" value="Pesterase_MJ0037"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56300">
        <property type="entry name" value="SSF56300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR04123">
        <property type="entry name" value="P_estr_lig_assc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0436">Ligase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Metallophos" evidence="1">
        <location>
            <begin position="43"/>
            <end position="152"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00149"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72039.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="245" mass="27033" checksum="644AE6CE0207AD0F" modified="2015-12-09" version="1">MSALTSHLRKYTAAPVCHDIQINGQLVGLHDSGVLWWPDEATLIVADLHLEKGSSFARRGIMLPPYDTATTLEKLAAVMDAFDPARVICLGDSFHDADGSDRLPAPYRAMLTTLQLNREWIWVTGNHDPVAPVRLCGETVDEIQIGPLTFRHEPVEKIGATATLGEVCGHLHPAARVRRFGRSIRRACFVTDGSRLVLPAFGALTGGLNVTHEAFSMIFQRRKYSVFMLGNDRLFPFTATRLVGD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABD1</accession>
    <name>A0A0M7ABD1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03180</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72435.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03180"/>
    <dbReference type="EnsemblBacteria" id="CTQ72435">
        <property type="protein sequence ID" value="CTQ72435"/>
        <property type="gene ID" value="LAX5112_03180"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025310">
        <property type="entry name" value="DUF4164"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13747">
        <property type="entry name" value="DUF4164"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="46"/>
            <end position="75"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72435.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="98" mass="10859" checksum="5301CEFF8006C8CF" modified="2015-12-09" version="1">MAEVDVMEKTSLSDAVKRLETALGQLETAVQRRLDADRSLNSLQDDLQRMGEDRSQLAASLDESEARASRLEEANKDVSRRLVTAMETIRSVLDTHGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABX2</accession>
    <name>A0A0M7ABX2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Mg-protoporphyrin IX chelatase</fullName>
            <ecNumber evidence="5">6.6.1.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">bchI</name>
        <name evidence="7" type="ORF">LAX5112_02980</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 5">
            <text>ATP + H2O + Mg(2+) + protoporphyrin IX = ADP + 3 H(+) + Mg-protoporphyrin IX + phosphate</text>
            <dbReference type="Rhea" id="RHEA:13961"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57306"/>
            <dbReference type="ChEBI" id="CHEBI:60492"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.6.1.1"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="5">Porphyrin-containing compound metabolism; bacteriochlorophyll biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the Mg-chelatase subunits D/I family.</text>
    </comment>
    <dbReference type="EC" id="6.6.1.1" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71942.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672484.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02980"/>
    <dbReference type="EnsemblBacteria" id="CTQ71942">
        <property type="protein sequence ID" value="CTQ71942"/>
        <property type="gene ID" value="LAX5112_02980"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00669"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016851">
        <property type="term" value="F:magnesium chelatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030494">
        <property type="term" value="P:bacteriochlorophyll biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015979">
        <property type="term" value="P:photosynthesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045006">
        <property type="entry name" value="CHLI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041628">
        <property type="entry name" value="ChlI/MoxR_AAA_lid"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011775">
        <property type="entry name" value="Mg_chelatase_ATPase-isu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000523">
        <property type="entry name" value="Mg_chelatse_chII-like_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32039">
        <property type="entry name" value="PTHR32039"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17863">
        <property type="entry name" value="AAA_lid_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01078">
        <property type="entry name" value="Mg_chelatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02030">
        <property type="entry name" value="BchI-ChlI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0077">Bacteriochlorophyll biosynthesis</keyword>
    <keyword evidence="5" id="KW-0149">Chlorophyll biosynthesis</keyword>
    <keyword evidence="5 7" id="KW-0436">Ligase</keyword>
    <keyword evidence="3 5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-0602">Photosynthesis</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA" evidence="6">
        <location>
            <begin position="28"/>
            <end position="209"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001499"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005799"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU362087"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ71942.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="351" mass="37841" checksum="601FEA090000B60C" modified="2015-12-09" version="1">MSAPFPFSAIVAQEDMKKALLMAAVEPLLGGVLIFGDRGTGKSTAVRALAELLPKIDTRAGCRFNCSPDHPQAACPVCTPVDGKKPPKKVQIRTPMIDLPLGATEDRICGALDLEKALVAGEKDFEPGLLAAANQGFLYIDEVNLLEDHLVDLLLDAAASGVNVVEREGLSIRHAARFALVGSGNPEEGDLRPQLLDRFGLSVEIRTINDLQQRIEVIRRRDAFEADTDAFVAKWSRKDAAIRSKVVKARKILRQVDIPDDVLSRMSQLCMSLGIDGMRGELTLMRACRASAALAGRLSVTWADISEISPMVLCHRLRRDPLDDAGSAPRIERAVAAVSAEAISPAEAAHG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AC62</accession>
    <name>A0A0M7AC62_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Glycine betaine transport ATP-binding protein OpuAA</fullName>
            <ecNumber evidence="8">3.6.3.32</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">opuAA_2</name>
        <name evidence="8" type="ORF">LAX5112_03271</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.32" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72688.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008191930.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03271"/>
    <dbReference type="EnsemblBacteria" id="CTQ72688">
        <property type="protein sequence ID" value="CTQ72688"/>
        <property type="gene ID" value="LAX5112_03271"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031460">
        <property type="term" value="P:glycine betaine transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000644">
        <property type="entry name" value="CBS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046342">
        <property type="entry name" value="CBS_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005892">
        <property type="entry name" value="Gly-betaine_transp_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54631">
        <property type="entry name" value="SSF54631"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01186">
        <property type="entry name" value="proV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51371">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0129">CBS domain</keyword>
    <keyword evidence="8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="6">
        <location>
            <begin position="26"/>
            <end position="267"/>
        </location>
    </feature>
    <feature type="domain" description="CBS" evidence="7">
        <location>
            <begin position="282"/>
            <end position="343"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="63"/>
            <end position="70"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00703"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51371"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ72688.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="343" mass="37756" checksum="9E2AAAE0C2EF6A63" modified="2015-12-09" version="1">MGEATGIEIKNLYKIFGPNGKDMVRLVKDGMSKTELNEKHNHVLGLNDINISMPGGKIEVVMGLSGSGKSTLIRHINRLIDPTDGEVLYGSEDVCKMSQNELRQFRRHKTAMVFQKFALLPHRTVMNNTVYGLEIQGVSMKEAQERAARWIARVGLEGFEDHYPNQLSGGMQQRVGLARALTNDADILLMDEAFSALDPLIRMDMQTVLLDLQEELHKTIVFITHDLDEALRLGDKIAILRDGAVIQQGSGQDIVLNPADEYIADFVKEVNRGRVILVDTVMDPSKTFEGGLTVQSGIMLEEAAKKFAETGLGECCVVNGEGKPIGVLNVQDTISAMVTPATH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACT9</accession>
    <name>A0A0M7ACT9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Polar organelle development protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">podJ_1</name>
        <name evidence="4" type="ORF">LAX5112_03013</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72030.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03013"/>
    <dbReference type="EnsemblBacteria" id="CTQ72030">
        <property type="protein sequence ID" value="CTQ72030"/>
        <property type="gene ID" value="LAX5112_03013"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.101.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002477">
        <property type="entry name" value="Peptidoglycan-bd-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036365">
        <property type="entry name" value="PGBD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036366">
        <property type="entry name" value="PGBDSf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006597">
        <property type="entry name" value="Sel1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01471">
        <property type="entry name" value="PG_binding_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08238">
        <property type="entry name" value="Sel1"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SMART" id="SM00671">
        <property type="entry name" value="SEL1"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47090">
        <property type="entry name" value="SSF47090"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PG_binding_1" evidence="3">
        <location>
            <begin position="1295"/>
            <end position="1344"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="722"/>
            <end position="748"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="763"/>
            <end position="829"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="941"/>
            <end position="1013"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="344"/>
            <end position="430"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="675"/>
            <end position="702"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="8"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="54"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="811"/>
            <end position="829"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ72030.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="1353" mass="145486" checksum="18A4939D8088A5CA" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACZ4</accession>
    <name>A0A0M7ACZ4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="8 10">Adenylosuccinate synthetase</fullName>
            <shortName evidence="8">AMPSase</shortName>
            <shortName evidence="8">AdSS</shortName>
            <ecNumber evidence="8 10">6.3.4.4</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">IMP--aspartate ligase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8 11" type="primary">purA</name>
        <name evidence="11" type="ORF">LAX5112_03206</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8 10">
            <text>GTP + IMP + L-aspartate = GDP + 2 H(+) + N(6)-(1,2-dicarboxyethyl)-AMP + phosphate</text>
            <dbReference type="Rhea" id="RHEA:15753"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29991"/>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57567"/>
            <dbReference type="ChEBI" id="CHEBI:58053"/>
            <dbReference type="ChEBI" id="CHEBI:58189"/>
            <dbReference type="EC" id="6.3.4.4"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="8">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="8">Binds 1 Mg(2+) ion per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="8 10">Purine metabolism; AMP biosynthesis via de novo pathway; AMP from IMP: step 1/2.</text>
    </comment>
    <comment type="subunit">
        <text evidence="1 8">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="8 10">Belongs to the adenylosuccinate synthetase family.</text>
    </comment>
    <dbReference type="EC" id="6.3.4.4" evidence="8 10"/>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72507.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672641.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03206"/>
    <dbReference type="EnsemblBacteria" id="CTQ72507">
        <property type="protein sequence ID" value="CTQ72507"/>
        <property type="gene ID" value="LAX5112_03206"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00075">
        <property type="reaction ID" value="UER00335"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004019">
        <property type="term" value="F:adenylosuccinate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044208">
        <property type="term" value="P:'de novo' AMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd03108">
        <property type="entry name" value="AdSS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.300.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.440.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.170.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00011">
        <property type="entry name" value="Adenylosucc_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018220">
        <property type="entry name" value="Adenylosuccin_syn_GTP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033128">
        <property type="entry name" value="Adenylosuccin_syn_Lys_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042109">
        <property type="entry name" value="Adenylosuccinate_synth_dom1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042110">
        <property type="entry name" value="Adenylosuccinate_synth_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042111">
        <property type="entry name" value="Adenylosuccinate_synth_dom3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001114">
        <property type="entry name" value="Adenylosuccinate_synthetase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11846">
        <property type="entry name" value="PTHR11846"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00709">
        <property type="entry name" value="Adenylsucc_synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00788">
        <property type="entry name" value="Adenylsucc_synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00184">
        <property type="entry name" value="purA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01266">
        <property type="entry name" value="ADENYLOSUCCIN_SYN_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00513">
        <property type="entry name" value="ADENYLOSUCCIN_SYN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7 8 10" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="2 8 10" id="KW-0436">Ligase</keyword>
    <keyword evidence="6 8 10" id="KW-0460">Magnesium</keyword>
    <keyword evidence="3 8 10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4 8 10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5 8 10" id="KW-0658">Purine biosynthesis</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="IMP binding" evidence="8">
        <location>
            <begin position="13"/>
            <end position="16"/>
        </location>
    </feature>
    <feature type="region of interest" description="IMP binding" evidence="8">
        <location>
            <begin position="38"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="8">
        <location>
            <begin position="299"/>
            <end position="305"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="8">
        <location>
            <position position="13"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="8">
        <location>
            <position position="41"/>
        </location>
    </feature>
    <feature type="active site" evidence="9">
        <location>
            <position position="141"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="12"/>
            <end position="18"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="13"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="40"/>
            <end position="42"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="40"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="130"/>
        </location>
        <ligand>
            <name>IMP</name>
            <dbReference type="ChEBI" id="CHEBI:58053"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="144"/>
        </location>
        <ligand>
            <name>IMP</name>
            <dbReference type="ChEBI" id="CHEBI:58053"/>
            <note>ligand shared between dimeric partners</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="224"/>
        </location>
        <ligand>
            <name>IMP</name>
            <dbReference type="ChEBI" id="CHEBI:58053"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="239"/>
        </location>
        <ligand>
            <name>IMP</name>
            <dbReference type="ChEBI" id="CHEBI:58053"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="303"/>
        </location>
        <ligand>
            <name>IMP</name>
            <dbReference type="ChEBI" id="CHEBI:58053"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="305"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="331"/>
            <end position="333"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="413"/>
            <end position="415"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU000520"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ72507.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="430" mass="46773" checksum="22DC18B938BEFCF6" modified="2015-12-09" version="1">MANVVVVGSQWGDEGKGKIVDWLSEQADVIVRFQGGHNAGHTLVIDGVSYKLSLLPSGVARPGKLSVIGNGVVLDPHALAEEVKRLGEQGVVVTPESLRVAENATLILSLHRELDALRENSNTGTKIGTTKRGIGPAYEDKVGRRAIRLMDLKNLTTLPAKIDRLLTHHNALRRGLGQDEISADAIFEELSSVADQVLPYMDKVWYLLDEQRRQGKRILFEGAQGALLDIDHGTYPFVTSSNTVAGQAATGCGLGPGSVDYVLGITKAYTTRVGEGPFPTEQQNEVGEFLGTRGHEFGTVTGRRRRCGWFDAVLVRQTVCTSGINGIALTKLDVLDGLEEIKICVGYELDGERIDYLPASQGAQERVKPIYESMPGWKESTEGARTWAELPAQAIKYVRHVEELIGAPVAILSTSPERDDTILVQNPFQD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AD48</accession>
    <name>A0A0M7AD48_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Succinate--CoA ligase [ADP-forming] subunit beta</fullName>
            <ecNumber evidence="6">6.2.1.5</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Succinyl-CoA synthetase subunit beta</fullName>
            <shortName evidence="6">SCS-beta</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6 9" type="primary">sucC</name>
        <name evidence="9" type="ORF">LAX5112_02867</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>ATP + CoA + succinate = ADP + phosphate + succinyl-CoA</text>
            <dbReference type="Rhea" id="RHEA:17661"/>
            <dbReference type="ChEBI" id="CHEBI:30031"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57292"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.2.1.5"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="6">Binds 1 Mg(2+) ion per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="6">Carbohydrate metabolism; tricarboxylic acid cycle; succinate from succinyl-CoA (ligase route): step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Heterotetramer of two alpha and two beta subunits.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the succinate/malate CoA ligase beta subunit family.</text>
    </comment>
    <dbReference type="EC" id="6.2.1.5" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71564.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672387.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02867"/>
    <dbReference type="EnsemblBacteria" id="CTQ71564">
        <property type="protein sequence ID" value="CTQ71564"/>
        <property type="gene ID" value="LAX5112_02867"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00223">
        <property type="reaction ID" value="UER00999"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004775">
        <property type="term" value="F:succinate-CoA ligase (ADP-forming) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006099">
        <property type="term" value="P:tricarboxylic acid cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1490.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.261">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00558">
        <property type="entry name" value="Succ_CoA_beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011761">
        <property type="entry name" value="ATP-grasp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013650">
        <property type="entry name" value="ATP-grasp_succ-CoA_synth-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013815">
        <property type="entry name" value="ATP_grasp_subdomain_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005811">
        <property type="entry name" value="CoA_ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017866">
        <property type="entry name" value="Succ-CoA_synthase_bsu_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005809">
        <property type="entry name" value="Succ_CoA_synthase_bsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016102">
        <property type="entry name" value="Succinyl-CoA_synth-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11815">
        <property type="entry name" value="PTHR11815"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08442">
        <property type="entry name" value="ATP-grasp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00549">
        <property type="entry name" value="Ligase_CoA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001554">
        <property type="entry name" value="SucCS_beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52210">
        <property type="entry name" value="SSF52210"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01016">
        <property type="entry name" value="sucCoAbeta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50975">
        <property type="entry name" value="ATP_GRASP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01217">
        <property type="entry name" value="SUCCINYL_COA_LIG_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 6 9" id="KW-0436">Ligase</keyword>
    <keyword evidence="5 6" id="KW-0460">Magnesium</keyword>
    <keyword evidence="3 6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4 6 7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 6" id="KW-0816">Tricarboxylic acid cycle</keyword>
    <feature type="domain" description="ATP-grasp" evidence="8">
        <location>
            <begin position="9"/>
            <end position="237"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding; shared with subunit alpha" evidence="6">
        <location>
            <begin position="331"/>
            <end position="333"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="46"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="53"/>
            <end position="55"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="109"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="112"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="117"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="209"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="223"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="274"/>
        </location>
        <ligand>
            <name>substrate</name>
            <note>ligand shared with subunit alpha</note>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022532"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00558"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00409"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ71564.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="399" mass="42217" checksum="C56BF8DE22C52DC2" modified="2015-12-09" version="1">MNIHEYQAKAVLKEFGAPVAEGVAIFSADEAEAAAKSLPGPLWVVKSQIHAGGRGKGKFKELDAEAKGGVRLAFSLDEVKAHAAEMLGNTLVTAQTGDAGKVVNRLYIEDGADIERELYLSILVDRTVGRPAFVVSTEGGMDIEAVAEETPEKIITLPIDPDTGVTEADAAKLCDALELTGAARDDGFKLFPILHKAFVEKDMALLEVNPLIVMKDGHLRVLDAKVSFDGNALFRHDDIMALRDETEEDAKEIEASKYDLAYVALDGDIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGATKEKVTAAFKIITSDPNVKGILVNIFGGIMRCDIIAEGVLAAVTEVGLQVPLVVRLEGTNVELGKKIISESGMNVIAADDLDDAAQKIVKAVKGGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADT7</accession>
    <name>A0A0M7ADT7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Nitrogenase iron protein 1</fullName>
            <ecNumber evidence="9">1.18.6.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">nifH1</name>
        <name evidence="9" type="ORF">LAX5112_02967</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the NifH/BchL/ChlL family.</text>
    </comment>
    <dbReference type="EC" id="1.18.6.1" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71903.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672474.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02967"/>
    <dbReference type="EnsemblBacteria" id="CTQ71903">
        <property type="protein sequence ID" value="CTQ71903"/>
        <property type="gene ID" value="LAX5112_02967"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018697">
        <property type="term" value="F:carbonyl sulfide nitrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016163">
        <property type="term" value="F:nitrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016628">
        <property type="term" value="F:oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030494">
        <property type="term" value="P:bacteriochlorophyll biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015979">
        <property type="term" value="P:photosynthesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010246">
        <property type="entry name" value="BchX"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030655">
        <property type="entry name" value="NifH/chlL_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000392">
        <property type="entry name" value="NifH/frxC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42864">
        <property type="entry name" value="PTHR42864"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00142">
        <property type="entry name" value="Fer4_NifH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02016">
        <property type="entry name" value="BchX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00746">
        <property type="entry name" value="NIFH_FRXC_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00692">
        <property type="entry name" value="NIFH_FRXC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51026">
        <property type="entry name" value="NIFH_FRXC_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="5 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6 8" id="KW-0408">Iron</keyword>
    <keyword evidence="7 8" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="3 8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8 9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005504"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU003688"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ71903.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="335" mass="35274" checksum="52B9A189C3C5BF93" modified="2015-12-09" version="1">MILENPTGRHYDMQDFLRGEAAIEPDAPATGPVTKETQIIAIYGKGGIGKSFTLANLSYMLAQLGKKVLLIGCDPKSDTTSLLFGGRACPTIIQTASAAKEAGSEVTVSDVCFKRDGVFAMELGGPEVGRGCGGRGIIHGFETLEKLGFHDWDFDYVLLDFLGDVVCGGFGLPIARDMCQKVVVVGSNDLQSLYVANNVCSAVQYFRKLGGNVGVAGLVVNKDDGTGEAHAFAKSVGIPVLAAIPQDEDIRRKSANYQIIGKPGGVWAPLFEALSINLAEAPPVLPEPLDQDGLLGLFDASETGADFVLTPATAEDMCAAGALDKPSLEVIYDTV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADW1</accession>
    <name>A0A0M7ADW1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Elongation factor P</fullName>
            <shortName evidence="7">EF-P</shortName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7 11" type="primary">efp</name>
        <name evidence="11" type="ORF">LAX5112_03171</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2 7">Protein biosynthesis; polypeptide chain elongation.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 7 8">Belongs to the elongation factor P family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72410.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008196321.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03171"/>
    <dbReference type="EnsemblBacteria" id="CTQ72410">
        <property type="protein sequence ID" value="CTQ72410"/>
        <property type="gene ID" value="LAX5112_03171"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00345"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003746">
        <property type="term" value="F:translation elongation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd04470">
        <property type="entry name" value="S1_EF-P_repeat_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd05794">
        <property type="entry name" value="S1_EF-P_repeat_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00141">
        <property type="entry name" value="EF_P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015365">
        <property type="entry name" value="Elong-fact-P_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014722">
        <property type="entry name" value="Rib_L2_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020599">
        <property type="entry name" value="Transl_elong_fac_P/YeiP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013185">
        <property type="entry name" value="Transl_elong_KOW-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001059">
        <property type="entry name" value="Transl_elong_P/YeiP_cen"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013852">
        <property type="entry name" value="Transl_elong_P/YeiP_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011768">
        <property type="entry name" value="Transl_elongation_fac_P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008991">
        <property type="entry name" value="Translation_prot_SH3-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30053">
        <property type="entry name" value="PTHR30053"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01132">
        <property type="entry name" value="EFP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08207">
        <property type="entry name" value="EFP_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09285">
        <property type="entry name" value="Elong-fact-P_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005901">
        <property type="entry name" value="EF-P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01185">
        <property type="entry name" value="EFP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00841">
        <property type="entry name" value="Elong-fact-P_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50104">
        <property type="entry name" value="SSF50104"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00038">
        <property type="entry name" value="efp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01275">
        <property type="entry name" value="EFP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 7 11" id="KW-0251">Elongation factor</keyword>
    <keyword evidence="6 7" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="EFP" evidence="10">
        <location>
            <begin position="68"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="domain" description="Elong-fact-P_C" evidence="9">
        <location>
            <begin position="130"/>
            <end position="185"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004815"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022768"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU004389"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="SMART" id="SM00841"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="SMART" id="SM01185"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ72410.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="187" mass="21283" checksum="17C1DE82A20F5E1D" modified="2015-12-09" version="1">MKINGNEIKPGNVLQHQETLWAVVKVQHVKPGKGGAFAQVEMKNLLDGRKLNERFRSEDKVERVRLEQKDFQYLYTQDDMLIFMDTETYEQLELQTEFVGDRAAFLQDGMMVTVELHEERPIGITLPQHVTLEISEADAVVKGQTQSSSYKPALMENGVRVMVPPFITAGEKIIVDTGTLEYVKRAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AE27</accession>
    <name>A0A0M7AE27_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03533</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73405.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03533"/>
    <dbReference type="EnsemblBacteria" id="CTQ73405">
        <property type="protein sequence ID" value="CTQ73405"/>
        <property type="gene ID" value="LAX5112_03533"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007402">
        <property type="entry name" value="DUF455"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009078">
        <property type="entry name" value="Ferritin-like_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011197">
        <property type="entry name" value="UCP012318"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04305">
        <property type="entry name" value="DUF455"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF012318">
        <property type="entry name" value="UCP012318"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47240">
        <property type="entry name" value="SSF47240"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="50"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="55"/>
            <end position="74"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73405.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="278" mass="30914" checksum="DBA1BB11A84C80B4" modified="2015-12-09" version="1">MTNTQTQPVPANLVAGARSVVEAADTAEKVRLAYAVSKAWFKRDLALGSPSKDGHMPDRPGRPDKPELLAPRDMPKRKLSGTAGRLALIHSLAHIELNAVDLTWDLIGRFAHVRLPRSYYDDWVRVGLEEAKHFSMLQDRLGQLGASYGDIPAHDGLWQAAQDTGHDLAARLAIIPLVLEARGLDITPPMIEKARSLGDEDTAKCLDVIYRDEKNHVAFGAKWFRFLCDRQGIRPEPAFHSYVRKHFRGALKPPFNDRARSEAGLTPGFYKPLARLTG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFP5</accession>
    <name>A0A0M7AFP5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 7">Cell division ATP-binding protein FtsE</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">ftsE_2</name>
        <name evidence="7" type="synonym">ftsE</name>
        <name evidence="9" type="ORF">LAX5112_03714</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Part of the ABC transporter FtsEX involved in cellular division. Important for assembly or stability of the septal ring.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Homodimer. Forms a membrane-associated complex with FtsX.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cell inner membrane</location>
            <topology evidence="7">Peripheral membrane protein</topology>
            <orientation evidence="7">Cytoplasmic side</orientation>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ73975.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451190.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03714"/>
    <dbReference type="EnsemblBacteria" id="CTQ73975">
        <property type="protein sequence ID" value="CTQ73975"/>
        <property type="gene ID" value="LAX5112_03714"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007049">
        <property type="term" value="P:cell cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd03255">
        <property type="entry name" value="ABC_MJ0796_LolCDE_FtsE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005286">
        <property type="entry name" value="Cell_div_FtsE_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017911">
        <property type="entry name" value="MacB_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02673">
        <property type="entry name" value="FtsE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6 7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="7 9" id="KW-0132">Cell division</keyword>
    <keyword evidence="7" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7" id="KW-0472">Membrane</keyword>
    <keyword evidence="4 6 7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="8">
        <location>
            <begin position="2"/>
            <end position="219"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="35"/>
            <end position="42"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002579"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00020019"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU365094"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ73975.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="219" mass="24521" checksum="FDD377DCDB9032CE" modified="2015-12-09" version="1">MIRFENVGLRYGMGPEILQDLTFHIEPQSFQFLTGPSGAGKTSLIRLLFMSLRPTRGLINVFGRDMSVISKQELPALRRKVGVVFQDFRLLDHLTTYENVALPLRVAGKDEAEYRSDVIDLLKWVGLGDRMHVLPPVLSGGEKQRAAIARALITRPEVLLADEPTGNVDPPLARRLLRLFIELNKLGTSVVIATHDIALLEQVDARRMVLAEGRLTIFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AG78</accession>
    <name>A0A0M7AG78_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">TPR repeat-containing protein YfgC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">yfgC_2</name>
        <name evidence="9" type="ORF">LAX5112_03540</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73426.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03540"/>
    <dbReference type="EnsemblBacteria" id="CTQ73426">
        <property type="protein sequence ID" value="CTQ73426"/>
        <property type="gene ID" value="LAX5112_03540"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004222">
        <property type="term" value="F:metalloendopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001915">
        <property type="entry name" value="Peptidase_M48"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_repeat"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01435">
        <property type="entry name" value="Peptidase_M48"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="SSF48452"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50005">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0482">Metalloprotease</keyword>
    <keyword evidence="2" id="KW-0645">Protease</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0802">TPR repeat</keyword>
    <keyword evidence="5" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Peptidase_M48" evidence="8">
        <location>
            <begin position="126"/>
            <end position="310"/>
        </location>
    </feature>
    <feature type="repeat" description="TPR" evidence="7">
        <location>
            <begin position="393"/>
            <end position="426"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00339"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF01435"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ73426.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="537" mass="58104" checksum="149C4311685B8D1D" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGR4</accession>
    <name>A0A0M7AGR4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03836</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74355.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673153.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03836"/>
    <dbReference type="EnsemblBacteria" id="CTQ74355">
        <property type="protein sequence ID" value="CTQ74355"/>
        <property type="gene ID" value="LAX5112_03836"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13508">
        <property type="entry name" value="Acetyltransf_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="1"/>
            <end position="145"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74355.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="168" mass="18418" checksum="47BB9A3D27C28D59" modified="2015-12-09" version="1">MIFRVSTKGDLQSLERIYPAAFPKENLLPVVRSLVTGSVDVLSLVAEDDGKVVGHVAFTICSVGDVSAALLAPLCVDPERHKQGIGTVLVREGFKRLQKRAINQVLVLGDPRYYGRFGFVAERAVRPPYPMPEGWADAWQSLSFGTTEDQIEGTLVVPGVWQNPVLWG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHM9</accession>
    <name>A0A0M7AHM9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Lipopolysaccharide transport periplasmic protein LptA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03640</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73730.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672984.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03640"/>
    <dbReference type="EnsemblBacteria" id="CTQ73730">
        <property type="protein sequence ID" value="CTQ73730"/>
        <property type="gene ID" value="LAX5112_03640"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005653">
        <property type="entry name" value="OstA-like_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03968">
        <property type="entry name" value="LptD_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809493" evidence="1">
        <location>
            <begin position="26"/>
            <end position="193"/>
        </location>
    </feature>
    <feature type="domain" description="OstA-like_N" evidence="2">
        <location>
            <begin position="44"/>
            <end position="166"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF03968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ73730.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="193" mass="20410" checksum="59F0481D1964970F" modified="2015-12-09" version="1">MMKPVFKRGLVAYSALMLAIAPLSAQTFSDSFAGFGSSDGQPIEIESNELKVEDQTKVATFIGDVVVIQGDTRLETSQLKVFYDGDGQSSEGADTSNGAVPAQQEISRLEASGGVHISSEDQTATGDEANFDMKTEVMVMTGKEVVLKQGGNVVVGNRLTVNLKTGQANLNAPADDGRVRVRILPNSAPSTQQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="33" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKJ4</accession>
    <name>A0A0M7AKJ4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Leucine--tRNA ligase</fullName>
            <ecNumber evidence="9">6.1.1.4</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">Leucyl-tRNA synthetase</fullName>
            <shortName evidence="9">LeuRS</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9 14" type="primary">leuS</name>
        <name evidence="14" type="ORF">LAX5112_03767</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 9">
            <text>ATP + L-leucine + tRNA(Leu) = AMP + diphosphate + L-leucyl-tRNA(Leu)</text>
            <dbReference type="Rhea" id="RHEA:11688"/>
            <dbReference type="Rhea" id="RHEA-COMP:9613"/>
            <dbReference type="Rhea" id="RHEA-COMP:9622"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57427"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78494"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.4"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 9 10">Belongs to the class-I aminoacyl-tRNA synthetase family.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.4" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74124.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673088.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03767"/>
    <dbReference type="EnsemblBacteria" id="CTQ74124">
        <property type="protein sequence ID" value="CTQ74124"/>
        <property type="gene ID" value="LAX5112_03767"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0002161">
        <property type="term" value="F:aminoacyl-tRNA editing activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004823">
        <property type="term" value="F:leucine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006429">
        <property type="term" value="P:leucyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00049_B">
        <property type="entry name" value="Leu_tRNA_synth_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001412">
        <property type="entry name" value="aa-tRNA-synth_I_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002300">
        <property type="entry name" value="aa-tRNA-synth_Ia"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002302">
        <property type="entry name" value="Leu-tRNA-ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025709">
        <property type="entry name" value="Leu_tRNA-synth_edit"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013155">
        <property type="entry name" value="M/V/L/I-tRNA-synth_anticd-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009080">
        <property type="entry name" value="tRNAsynth_Ia_anticodon-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009008">
        <property type="entry name" value="Val/Leu/Ile-tRNA-synth_edit"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43740">
        <property type="entry name" value="PTHR43740"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08264">
        <property type="entry name" value="Anticodon_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00133">
        <property type="entry name" value="tRNA-synt_1"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13603">
        <property type="entry name" value="tRNA-synt_1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00985">
        <property type="entry name" value="TRNASYNTHLEU"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47323">
        <property type="entry name" value="SSF47323"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50677">
        <property type="entry name" value="SSF50677"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00396">
        <property type="entry name" value="leuS_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00178">
        <property type="entry name" value="AA_TRNA_LIGASE_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 9 10" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="6 9 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 9 10" id="KW-0436">Ligase</keyword>
    <keyword evidence="5 9 10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7 9 10" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="tRNA-synt_1" evidence="11">
        <location>
            <begin position="15"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="domain" description="tRNA-synt_1_2" evidence="13">
        <location>
            <begin position="222"/>
            <end position="412"/>
        </location>
    </feature>
    <feature type="domain" description="tRNA-synt_1" evidence="11">
        <location>
            <begin position="430"/>
            <end position="589"/>
        </location>
    </feature>
    <feature type="domain" description="tRNA-synt_1" evidence="11">
        <location>
            <begin position="631"/>
            <end position="670"/>
        </location>
    </feature>
    <feature type="domain" description="Anticodon_1" evidence="12">
        <location>
            <begin position="716"/>
            <end position="838"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="'HIGH' region" evidence="9">
        <location>
            <begin position="43"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="'KMSKS' region" evidence="9">
        <location>
            <begin position="632"/>
            <end position="636"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="635"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001372"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005594"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU363035"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF00133"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF08264"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF13603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="CTQ74124.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="874" mass="98970" checksum="E80DFFDFB470D139" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AL93</accession>
    <name>A0A0M7AL93_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Transport permease protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">tagG</name>
        <name evidence="8" type="ORF">LAX5112_04227</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cell inner membrane</location>
            <topology evidence="6">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the ABC-2 integral membrane protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75427.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673464.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000021.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04227"/>
    <dbReference type="EnsemblBacteria" id="CTQ75427">
        <property type="protein sequence ID" value="CTQ75427"/>
        <property type="gene ID" value="LAX5112_04227"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013525">
        <property type="entry name" value="ABC_2_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000412">
        <property type="entry name" value="ABC_2_transport"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01061">
        <property type="entry name" value="ABC2_membrane"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006648">
        <property type="entry name" value="DrrB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00164">
        <property type="entry name" value="ABC2TRNSPORT"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51012">
        <property type="entry name" value="ABC_TM2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="31"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="68"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="112"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="144"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="180"/>
            <end position="198"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="233"/>
            <end position="254"/>
        </location>
    </feature>
    <feature type="domain" description="ABC2_membrane" evidence="7">
        <location>
            <begin position="14"/>
            <end position="224"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00442"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU361157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF01061"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ75427.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="265" mass="30116" checksum="EEE238F29639E30E" modified="2015-12-09" version="1">MHSILSSFIDNRKLIWRLVKRDLQARYRGSMLGMAWTVLTPLFLLLVFTFVFSVVFQSRWNVEVTGKGQFALILFCGLIIYQMFADCANRAPTLLLENVAYIKKVVFPLDTLAWVSVGGALVNFLISYVLLLIGQLVLIGTLHWTMIFLPLVLLPLMLFVVGSVWLLSSVGMYIRDLRQLVGVVVTMLMFLSPIFYPIQAIPEGFRIFIYLNPLAFMMEQLRAITLFGNIPNIPGLALITGLMLAFFLFSGWWFNKVKKGFADVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AL94</accession>
    <name>A0A0M7AL94_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04400</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75895.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673613.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000023.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75895">
        <property type="protein sequence ID" value="CTQ75895"/>
        <property type="gene ID" value="LAX5112_04400"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="58"/>
            <end position="94"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75895.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="94" mass="9959" checksum="47D79E1BBAF96110" modified="2015-12-09" version="1">MSKSAQPPAQVARIRRTIRQALIEQENAAHDAKRRGDTLLARDVCAIANALKNAAEMRLKPHGPISDDGGPNCGTSPEKVKTPTGHPTLEGTGP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALF9</accession>
    <name>A0A0M7ALF9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04163</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75256.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673414.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04163"/>
    <dbReference type="EnsemblBacteria" id="CTQ75256">
        <property type="protein sequence ID" value="CTQ75256"/>
        <property type="gene ID" value="LAX5112_04163"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029069">
        <property type="entry name" value="HotDog_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002539">
        <property type="entry name" value="MaoC-like_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01575">
        <property type="entry name" value="MaoC_dehydratas"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54637">
        <property type="entry name" value="SSF54637"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MaoC-like" evidence="1">
        <location>
            <begin position="12"/>
            <end position="119"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01575"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75256.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="152" mass="16937" checksum="184223A924152315" modified="2015-12-09" version="1">MPDIYHFEDFEPGQVFELGSVTATKDQIIEFAEEFDPQPFHLDEEAGKASMLGRLAASGWHTGSMVMRLLAINLLNKSTGQGSPGIDELKWQSPVYPGDTLTAKAEVLASKELRSKPDLGIVTFRITATNQNQKQVMFWENPILFLKREAAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALL6</accession>
    <name>A0A0M7ALL6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Molybdopterin biosynthesis protein MoeB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03884</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74504.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673189.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03884"/>
    <dbReference type="EnsemblBacteria" id="CTQ74504">
        <property type="protein sequence ID" value="CTQ74504"/>
        <property type="gene ID" value="LAX5112_03884"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.250.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001763">
        <property type="entry name" value="Rhodanese-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036873">
        <property type="entry name" value="Rhodanese-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00581">
        <property type="entry name" value="Rhodanese"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00450">
        <property type="entry name" value="RHOD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52821">
        <property type="entry name" value="SSF52821"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50206">
        <property type="entry name" value="RHODANESE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Rhodanese" evidence="1">
        <location>
            <begin position="33"/>
            <end position="129"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50206"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74504.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="131" mass="14749" checksum="DBF187000B6F4D63" modified="2015-12-09" version="1">MTQKLKVSSAELVAQARAQIEEIDAKDAIALVEDPRVQFVDLRDVRERKHSGYILGSFHCPRGMTEFWVDPESPYFKEIFGEDKKFVFHCAAGWRSALTVATLKSMGFEAAHITDGFADWVKQGGPVEKDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALN8</accession>
    <name>A0A0M7ALN8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04198</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75352.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75352">
        <property type="protein sequence ID" value="CTQ75352"/>
        <property type="gene ID" value="LAX5112_04198"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ75352.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="93" mass="10571" checksum="E68B2A15C98F3AF9" modified="2015-12-09" version="1">MPKVGNYIQRDYHKRFSSKRTARWKSYNEGWSQKRSNSLQKSQNLRTQLTTSITNITIASGTQQARFFLQNSSSPQSSYASPTAVAARVNVLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALP2</accession>
    <name>A0A0M7ALP2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Neu5Ac permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">siaT_26</name>
        <name evidence="5" type="ORF">LAX5112_04447</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ76045.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673653.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000024.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04447"/>
    <dbReference type="EnsemblBacteria" id="CTQ76045">
        <property type="protein sequence ID" value="CTQ76045"/>
        <property type="gene ID" value="LAX5112_04447"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010656">
        <property type="entry name" value="DctM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004681">
        <property type="entry name" value="TRAP_DctM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33362">
        <property type="entry name" value="PTHR33362"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06808">
        <property type="entry name" value="DctM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006066">
        <property type="entry name" value="HI0050"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00786">
        <property type="entry name" value="dctM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="12"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="68"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="109"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="156"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="188"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="231"/>
            <end position="254"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="299"/>
            <end position="322"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="334"/>
            <end position="354"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="374"/>
            <end position="400"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="421"/>
            <end position="442"/>
        </location>
    </feature>
    <feature type="domain" description="DctM" evidence="4">
        <location>
            <begin position="11"/>
            <end position="436"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF06808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ76045.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="447" mass="47566" checksum="F0C05A6CD8129057" modified="2015-12-09" version="1">MDPSTIGIFGFVAALTLLILRVPIGFTLVSVSSICALVTYAWRPGSEFNLGRGLRPAMALIESNAFEFIHSYSLSMVPLFIAAGHIAYHTRITTDIYDAVRVWMSRLPGGLAVASLIGCGGFSAITGSSVACASSMGRICVPEMLRYGYDKQLASASVAAGGTLGALIPPSVLFILYGTFTETSISRLFMAGVVPGLLSLAGFIITVLVWVKLRPEAAPVPEGEISGDDRFTAAIKAWPAATLMIIIIGGIYGGIFTATEAAAVSLSFVLIYGTISGRLRWADFVLSMRETAYQTGSLFFIAVGAKIFVSFVSLTGVTGGLVDIVSSSGLETWMILLCIVAIYLVMGMFLDPIGTMLLTLPFTVPLIEGMGFDLIWFGVIVVKLLEIGLITPPVGLNVFVINSVVGREIQVHTIFFGIMKFLVLDIVVLLALLAFPILSLGLPSLMF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALT2</accession>
    <name>A0A0M7ALT2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Cytochrome bo(3) ubiquinol oxidase subunit 3</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="13">Cytochrome o ubiquinol oxidase subunit 3</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="11">Oxidase bo(3) subunit 3</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="14">Ubiquinol oxidase polypeptide III</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="12">Ubiquinol oxidase subunit 3</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="18" type="primary">cyoC</name>
        <name evidence="18" type="ORF">LAX5112_04379</name>
    </gene>
    <organism evidence="18 19">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="19" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="19">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Cytochrome bo(3) ubiquinol terminal oxidase is the component of the aerobic respiratory chain of E.coli that predominates when cells are grown at high aeration. Has proton pump activity across the membrane in addition to electron transfer, pumping 2 protons/electron.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">Heterooctamer of two A chains, two B chains, two C chains and two D chains.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="15">Cell membrane</location>
            <topology evidence="15">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 15">Belongs to the cytochrome c oxidase subunit 3 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75839.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673597.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000023.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04379"/>
    <dbReference type="EnsemblBacteria" id="CTQ75839">
        <property type="protein sequence ID" value="CTQ75839"/>
        <property type="gene ID" value="LAX5112_04379"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009486">
        <property type="term" value="F:cytochrome bo3 ubiquinol oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004129">
        <property type="term" value="F:cytochrome-c oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019646">
        <property type="term" value="P:aerobic electron transport chain"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024791">
        <property type="entry name" value="Cyt_c/ubiquinol_Oxase_su3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000298">
        <property type="entry name" value="Cyt_c_oxidase-like_su3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035973">
        <property type="entry name" value="Cyt_c_oxidase_su3-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013833">
        <property type="entry name" value="Cyt_c_oxidase_su3_a-hlx"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014206">
        <property type="entry name" value="Cyt_c_ubiqinol_oxidase_su3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11403">
        <property type="entry name" value="PTHR11403"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00510">
        <property type="entry name" value="COX3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81452">
        <property type="entry name" value="SSF81452"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02842">
        <property type="entry name" value="CyoC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50253">
        <property type="entry name" value="COX3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0249">Electron transport</keyword>
    <keyword evidence="9 16" id="KW-0472">Membrane</keyword>
    <keyword evidence="18" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="19" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 15 16" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8 16" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="29"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="70"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="97"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="135"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="182"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="domain" description="COX3" evidence="17">
        <location>
            <begin position="1"/>
            <end position="203"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010581"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011700"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00014687"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00025694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00030072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00031884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00032189"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00032717"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="RuleBase" id="RU003376"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="PROSITE" id="PS50253"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="EMBL" id="CTQ75839.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="204" mass="22209" checksum="94ED866817A1E8B6" modified="2015-12-09" version="1">MSEMLTIRNHADLLEEEEHHSLRGREFGFWLFLMGDAVIFALLFATYVVLSGNSAAGPTSQQVFDLSHTAIETALLLVSSLTFGIASLAMDKGHGRAVILWLLITLGLGLGFLAMEVLEFRGMILQGAGPDVSGFLSAFFTLVGMHGAHVAMGSISILVMIGQVMTKGLTLPVRSRLNRLGLFWHFLDIVWIGIFSVVYLPGVM</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALV8</accession>
    <name>A0A0M7ALV8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Glycine betaine transporter OpuD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">opuD_3</name>
        <name evidence="7" type="ORF">LAX5112_04473</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ76118.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673672.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000024.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76118">
        <property type="protein sequence ID" value="CTQ76118"/>
        <property type="gene ID" value="LAX5112_04473"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071705">
        <property type="term" value="P:nitrogen compound transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000060">
        <property type="entry name" value="BCCT_transptr"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30047">
        <property type="entry name" value="PTHR30047"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02028">
        <property type="entry name" value="BCCT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="46"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="86"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="135"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="176"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="220"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="251"/>
            <end position="268"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="314"/>
            <end position="332"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="344"/>
            <end position="368"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="398"/>
            <end position="428"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="440"/>
            <end position="461"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="467"/>
            <end position="491"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ76118.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="498" mass="53625" checksum="1DC099BBD22B2B9E" modified="2015-12-09" version="1">MDSNRLLLACSISLCAIVGLWGVIDPEGLQAVAREIVDQYFVSRGWFVMLSVTIMLLFCLGLTFTRFGDIRLGADDDRPEYSTPTWIAMLFAAGMGVGLLFWAVAEPLTHFAFLKDKISVPEAADSALLATNFNWGIHAWAIYGTTALSIAYFSFRRGTPMLVSAPIKSLFPGEKWAWVVGWFSDFMAIAAIAIGVGGSIAMGVFQVADGVSVLAGTQTAAPWLVGLIFVVMVIAYIPPLMVDLSTGMAKLSNIAMSLAIALVAYTIIMGPTEFLMNSVIGGIGMYIADVIPAGFRTFTFYGDEVGRWFQDWTLTYMVWWIAWGPFVGVFVARISKGRTIREFVLGVLIGPTLFSTIWFGAFGGVGIFETLNGKGELLALTQTNVERMTFALLDRLPFATVTTLATILAAFLFIVTSVVSAAFVLGMFSTGGNQNPSVKIKVIWGGLLGVLGAAMLLSGSMSAVRTLIALGALPFVFITAMLLACLIKALILDNPKET</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AM25</accession>
    <name>A0A0M7AM25_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Protein-tyrosine-phosphatase</fullName>
            <ecNumber evidence="2">3.1.3.48</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">arsC_3</name>
        <name evidence="5" type="ORF">LAX5112_03988</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>H2O + O-phospho-L-tyrosyl-[protein] = L-tyrosyl-[protein] + phosphate</text>
            <dbReference type="Rhea" id="RHEA:10684"/>
            <dbReference type="Rhea" id="RHEA-COMP:10136"/>
            <dbReference type="Rhea" id="RHEA-COMP:10137"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:46858"/>
            <dbReference type="ChEBI" id="CHEBI:82620"/>
            <dbReference type="EC" id="3.1.3.48"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="3.1.3.48" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74823.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451067.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03988"/>
    <dbReference type="EnsemblBacteria" id="CTQ74823">
        <property type="protein sequence ID" value="CTQ74823"/>
        <property type="gene ID" value="LAX5112_03988"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004725">
        <property type="term" value="F:protein tyrosine phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023485">
        <property type="entry name" value="Ptyr_pPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036196">
        <property type="entry name" value="Ptyr_pPase_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01451">
        <property type="entry name" value="LMWPc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00226">
        <property type="entry name" value="LMWPc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52788">
        <property type="entry name" value="SSF52788"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-0904">Protein phosphatase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="LMWPc" evidence="4">
        <location>
            <begin position="6"/>
            <end position="144"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00013064"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022912"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00226"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ74823.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="165" mass="17982" checksum="07D89C65ECC8B39D" modified="2015-12-09" version="1">MTDKAYNVLFLCTGNSARSIMAEAILNRDGRGRFKAFSAGSTPSGSVRPEALALLGKMNYKTEEVRSKSWDEFAAPDAPVMDFVFTVCDNAAKESCPVWPGQPMSAHWGVPDPVAVEGNETERQLAFAEAFRMLSNRISIFTSLPLTSLDKLSLQKKLDEIGSAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMF3</accession>
    <name>A0A0M7AMF3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04060</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ74963.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04060"/>
    <dbReference type="EnsemblBacteria" id="CTQ74963">
        <property type="protein sequence ID" value="CTQ74963"/>
        <property type="gene ID" value="LAX5112_04060"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009506">
        <property type="entry name" value="DUF1127"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06568">
        <property type="entry name" value="DUF1127"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ74963.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="49" mass="5804" checksum="E1C376CF6059C369" modified="2015-12-09" version="1">MIDNVVRKFNNWKSYRRTYDELSNLSNRELDDLGIARADIARYARAAIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMJ4</accession>
    <name>A0A0M7AMJ4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">barA_3</name>
        <name evidence="7" type="ORF">LAX5112_04316</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000022">
        <property type="protein sequence ID" value="CTQ75652.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673541.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000022.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04316"/>
    <dbReference type="EnsemblBacteria" id="CTQ75652">
        <property type="protein sequence ID" value="CTQ75652"/>
        <property type="gene ID" value="LAX5112_04316"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7" id="KW-0418">Kinase</keyword>
    <keyword evidence="3 4" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Histidine kinase" evidence="5">
        <location>
            <begin position="88"/>
            <end position="303"/>
        </location>
    </feature>
    <feature type="domain" description="Response regulatory" evidence="6">
        <location>
            <begin position="329"/>
            <end position="446"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="4">
        <location>
            <position position="380"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ75652.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="450" mass="49221" checksum="F2671D247333114E" modified="2015-12-09" version="1">MSLYDIDDPVRLKKINAALVNRVEQAVDQQRNAFSLFETAISLEGQIRKRTDELTSALRRVEEINVELARQKDISERANRSKTQFLAAASHDILQPLNAAQLTISSLYDLQQSDKAIAMVAQVERSLDTMNELLRTLLDISRLDAGVTMPRFTSVPIPPILDSLLSDLRPMAEKKGLRLRVAVTNDCVYTDRLMLRRALQNLISNAIHYTDKGGVLIGTRRQGDRISIEVIDTGRGIPEDQQEKIFEEFHRGPLSEGAADQGTGLGLGLAIVNRLVTALNHEVSVQSSPGKGSVFRISALRASTPPALQIAETQPSAPPAAKGNLSGRKILVLENDPAVIEAMEGLLANWGCEFKVGRSTRDALEALESLTWIPDLIIADHHLDHGNLGTETLAQLYTILPIKVPAILATADASETVVEEAKRLGVEHMPKPLKPAQLRALATHLINGGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMN1</accession>
    <name>A0A0M7AMN1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">LAX5112_04581</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the four-carbon acid sugar kinase family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000026">
        <property type="protein sequence ID" value="CTQ76398.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673770.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000026.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04581"/>
    <dbReference type="EnsemblBacteria" id="CTQ76398">
        <property type="protein sequence ID" value="CTQ76398"/>
        <property type="gene ID" value="LAX5112_04581"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10840">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.980.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037051">
        <property type="entry name" value="4-carb_acid_sugar_kinase_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010737">
        <property type="entry name" value="DUF1537"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031475">
        <property type="entry name" value="NBD_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042213">
        <property type="entry name" value="NBD_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17042">
        <property type="entry name" value="NBD_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07005">
        <property type="entry name" value="SBD_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="4" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="SBD_N" evidence="7">
        <location>
            <begin position="3"/>
            <end position="227"/>
        </location>
    </feature>
    <feature type="domain" description="NBD_C" evidence="8">
        <location>
            <begin position="250"/>
            <end position="403"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005715"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF07005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF17042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ76398.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="414" mass="43163" checksum="93F8F3FAA7F29845" modified="2015-12-09" version="1">MKLGVIADDFTGASDIALMLSEAGMQTVQFVGVPSSTEASGSGTNCDAGVISLKSRTETAVDAIRQSLAASDWLLSQGCEQIVFKVCSTFDSTDEGNIGPVTQALAERLGEQTVLVCPAFPENGRTVYQGHLFVGETLLNESGMQNHPLTPMRDPDIRRVLSRQTTWPVSHIAHRTVRQGAESIGDAINAKTGSMAILDAITDEDLIAIGKAAAGRRLVTGGSGIAIGLPANFGITPHQHSWTGTGGKAVVLSGSCSTATRGQVSHYRQKAPSREIMVEDVIGGWVSIDELVEWTISQDEPPLLFSSADPETVSQVQQRFGRDKSASAIENLFSDLAAALVGAGVERIVVAGGETSGAVVSGIKASTFEIGPRIAPGVPALSVAGQPLALALKSGNFGGPNFFEDALHVLRAGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="33" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMU4</accession>
    <name>A0A0M7AMU4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">DNA gyrase subunit A</fullName>
            <ecNumber evidence="8">5.6.2.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8 11" type="primary">gyrA</name>
        <name evidence="11" type="ORF">LAX5112_04038</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 8">
            <text>ATP-dependent breakage, passage and rejoining of double-stranded DNA.</text>
            <dbReference type="EC" id="5.6.2.2"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="8">Heterotetramer, composed of two GyrA and two GyrB chains. In the heterotetramer, GyrA contains the active site tyrosine that forms a transient covalent intermediate with DNA, while GyrB binds cofactors and catalyzes ATP hydrolysis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="miscellaneous">
        <text evidence="8">Few gyrases are as efficient as E.coli at forming negative supercoils. Not all organisms have 2 type II topoisomerases; in organisms with a single type II topoisomerase this enzyme also has to decatenate newly replicated chromosomes.</text>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the topoisomerase GyrA/ParC subunit family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the type II topoisomerase GyrA/ParC subunit family.</text>
    </comment>
    <dbReference type="EC" id="5.6.2.2" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ74924.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673328.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04038"/>
    <dbReference type="EnsemblBacteria" id="CTQ74924">
        <property type="protein sequence ID" value="CTQ74924"/>
        <property type="gene ID" value="LAX5112_04038"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005694">
        <property type="term" value="C:chromosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034335">
        <property type="term" value="F:DNA negative supercoiling activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006265">
        <property type="term" value="P:DNA topological change"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006261">
        <property type="term" value="P:DNA-templated DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00187">
        <property type="entry name" value="TOP4c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.268.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.120.10.90">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.199.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01897">
        <property type="entry name" value="GyrA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005743">
        <property type="entry name" value="GyrA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006691">
        <property type="entry name" value="GyrA/parC_rep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035516">
        <property type="entry name" value="Gyrase/topoIV_suA_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013760">
        <property type="entry name" value="Topo_IIA-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013758">
        <property type="entry name" value="Topo_IIA_A/C_ab"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013757">
        <property type="entry name" value="Topo_IIA_A_a_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002205">
        <property type="entry name" value="Topo_IIA_dom_A"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03989">
        <property type="entry name" value="DNA_gyraseA_C"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00521">
        <property type="entry name" value="DNA_topoisoIV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00434">
        <property type="entry name" value="TOP4c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101904">
        <property type="entry name" value="SSF101904"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56719">
        <property type="entry name" value="SSF56719"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 8" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7 8 11" id="KW-0413">Isomerase</keyword>
    <keyword evidence="3 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-0799">Topoisomerase</keyword>
    <feature type="domain" description="TOP4c" evidence="10">
        <location>
            <begin position="24"/>
            <end position="503"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="896"/>
            <end position="940"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="GyrA-box" evidence="8">
        <location>
            <begin position="564"/>
            <end position="570"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="9">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="active site" description="O-(5'-phospho-DNA)-tyrosine intermediate" evidence="8">
        <location>
            <position position="135"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000185"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008263"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023029"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01897"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="SMART" id="SM00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ74924.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="940" mass="103725" checksum="33DE8BDAFDC3E18A" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANY9</accession>
    <name>A0A0M7ANY9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Leucine-responsive regulatory protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">lrp_10</name>
        <name evidence="5" type="ORF">LAX5112_04720</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000029">
        <property type="protein sequence ID" value="CTQ76835.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008190144.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000029.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04720"/>
    <dbReference type="EnsemblBacteria" id="CTQ76835">
        <property type="protein sequence ID" value="CTQ76835"/>
        <property type="gene ID" value="LAX5112_04720"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000485">
        <property type="entry name" value="AsnC-type_HTH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019888">
        <property type="entry name" value="Tscrpt_reg_AsnC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019887">
        <property type="entry name" value="Tscrpt_reg_AsnC/Lrp_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019885">
        <property type="entry name" value="Tscrpt_reg_HTH_AsnC-type_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01037">
        <property type="entry name" value="AsnC_trans_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00033">
        <property type="entry name" value="HTHASNC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00344">
        <property type="entry name" value="HTH_ASNC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00519">
        <property type="entry name" value="HTH_ASNC_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50956">
        <property type="entry name" value="HTH_ASNC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH asnC-type" evidence="4">
        <location>
            <begin position="5"/>
            <end position="66"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50956"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ76835.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="156" mass="17618" checksum="2DCF1C49E9E2442E" modified="2015-12-09" version="1">MKARLDAIDWQILKELQDDGRMTNVELARRVGISAPPCLRRVRALEEAGLIQGYRTLLDEKQLGYDVTAFAMVGLHSQTEADLIAFEQTVEKWPLVRESYMLSGEVDFLLKCVSPDLQTFQNFVIRELTAAPNVDSVRTALTIRRTKDEPVVPIDG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APZ3</accession>
    <name>A0A0M7APZ3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Phosphoglycolate phosphatase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04617</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000027">
        <property type="protein sequence ID" value="CTQ76512.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673804.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000027.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04617"/>
    <dbReference type="EnsemblBacteria" id="CTQ76512">
        <property type="protein sequence ID" value="CTQ76512"/>
        <property type="gene ID" value="LAX5112_04617"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006357">
        <property type="entry name" value="HAD-SF_hydro_IIA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006356">
        <property type="entry name" value="HAD-SF_hydro_IIA_hyp3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13344">
        <property type="entry name" value="Hydrolase_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01459">
        <property type="entry name" value="HAD-SF-IIA-hyp4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ76512.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="279" mass="29717" checksum="67CC3C427E766154" modified="2015-12-09" version="1">MTRVIKSLSEIAPDYDAIVLDQWGVLHDGSAAYPGTAAALEHLEARGTRLAVLSNSGKRAAPNLARITTMGFSSGLFDCIMTSGEALWRDIANCTITERRFFPVERTKGDASAWATELAIDLTPDLNSAEAVLLMGLPDGTNLSDWQPVLEKAASRQLRIYCSNPDKASPRAGGRTVMSPGALAEIYTAAGGDVVYYGKPFKPVFGSLAQALGTDRLLMVGDSLEHDIAGADAAGWDSVLIQGGLYAADFSTGDADTTLARLCAEKNAPFPTYRLEVLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQP7</accession>
    <name>A0A0M7AQP7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Allantoate amidohydrolase</fullName>
            <ecNumber evidence="5">3.5.3.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">allC</name>
        <name evidence="5" type="ORF">LAX5112_04641</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="3">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="3">Binds 2 Zn(2+) ions per subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase M20 family.</text>
    </comment>
    <dbReference type="EC" id="3.5.3.-" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000027">
        <property type="protein sequence ID" value="CTQ76580.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673841.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000027.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04641"/>
    <dbReference type="EnsemblBacteria" id="CTQ76580">
        <property type="protein sequence ID" value="CTQ76580"/>
        <property type="gene ID" value="LAX5112_04641"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016813">
        <property type="term" value="F:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010158">
        <property type="entry name" value="Amidase_Cbmase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036264">
        <property type="entry name" value="Bact_exopeptidase_dim_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002933">
        <property type="entry name" value="Peptidase_M20"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011650">
        <property type="entry name" value="Peptidase_M20_dimer"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32494">
        <property type="entry name" value="PTHR32494"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07687">
        <property type="entry name" value="M20_dimer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01546">
        <property type="entry name" value="Peptidase_M20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001235">
        <property type="entry name" value="Amidase_carbamoylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55031">
        <property type="entry name" value="SSF55031"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01879">
        <property type="entry name" value="hydantase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="M20_dimer" evidence="4">
        <location>
            <begin position="200"/>
            <end position="302"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="76"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="87"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="119"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="178"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="372"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>2</label>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006153"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR001235-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF07687"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ76580.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="398" mass="42325" checksum="221AE2A465384919" modified="2015-12-09" version="1">MQVQPDRFLQDLHTLRSFGASGVGKGVVRPAFSDPDVAARTWLFDQLAAAGLAPHVDPAGNVFGLADEPSILLGSHSDTQPEGGWLDGALGVIAALEIARAAKETGGPPVSVVNFQDEEGRFGALTGSSIYSGKTTLAEADTFTDVNGVSFRDARSAMADLTGELIPHAQFTGFIELHIEQGSTLDEAGETIGVVTDIVGSRQLQVTLTGQQNHAGTTLMHQRKDAFQALSAFNSALNDRLRNIVTPRTVWTIGRVHLRPNAPSIVPGEVMFDVQWRDVDDDRLARMEALIRDLVSAVAEEYGMAAEVVPIKALQPVPMDPTLRGALCAGAEAQASGKWREMPSGALHDASNMASLMPAAMLFVPSIGGISHDFAEDTNEEDLIIGLRVLADAVSRLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARS7</accession>
    <name>A0A0M7ARS7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">8-oxo-dGTP diphosphatase</fullName>
            <ecNumber evidence="3">3.6.1.55</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">mutT</name>
        <name evidence="3" type="ORF">LAX5112_04837</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.6.1.55" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000032">
        <property type="protein sequence ID" value="CTQ77211.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451053.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000032.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04837"/>
    <dbReference type="EnsemblBacteria" id="CTQ77211">
        <property type="protein sequence ID" value="CTQ77211"/>
        <property type="gene ID" value="LAX5112_04837"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035539">
        <property type="term" value="F:8-oxo-7,8-dihydrodeoxyguanosine triphosphate pyrophosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029119">
        <property type="entry name" value="MutY_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020476">
        <property type="entry name" value="Nudix_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015797">
        <property type="entry name" value="NUDIX_hydrolase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020084">
        <property type="entry name" value="NUDIX_hydrolase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000086">
        <property type="entry name" value="NUDIX_hydrolase_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14815">
        <property type="entry name" value="NUDIX_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00502">
        <property type="entry name" value="NUDIXFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55811">
        <property type="entry name" value="SSF55811"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51462">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00893">
        <property type="entry name" value="NUDIX_BOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nudix hydrolase" evidence="2">
        <location>
            <begin position="3"/>
            <end position="131"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51462"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ77211.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="133" mass="14952" checksum="7093248AC1232A77" modified="2015-12-09" version="1">MTKIVLVAACALVDVDGRILIAQRPEGKSMAGLWEFPGGKVETGERPEETLIRELGEELGIEVNEACLAPLTFASHAYEDFHLLMPLYICRRWEGTPRGRENQALKWVRALRLRDYPMPAADEPLIPHIMDAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARY5</accession>
    <name>A0A0M7ARY5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04903</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000034">
        <property type="protein sequence ID" value="CTQ77417.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674046.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000034.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77417">
        <property type="protein sequence ID" value="CTQ77417"/>
        <property type="gene ID" value="LAX5112_04903"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809567" evidence="1">
        <location>
            <begin position="21"/>
            <end position="141"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77417.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="141" mass="15426" checksum="777CF0F7E76EAB96" modified="2015-12-09" version="1">MKLTTSLAFAAVLTCCPAIAADSGKYTCLGQADWGTLDIEKEGVRFNNFSMRSAPYFFDREKLVANLTFSVTNRAETTVYVKGEFIFFDDQDAPVFAINAVPRSDSVSAGTTDTASGEVFMEEGEFSQVQKVCYFIGGKFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARZ7</accession>
    <name>A0A0M7ARZ7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">N-carbamoyl-D-amino acid hydrolase</fullName>
            <ecNumber evidence="4">3.5.1.77</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_04832</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the carbon-nitrogen hydrolase superfamily. NIT1/NIT2 family.</text>
    </comment>
    <dbReference type="EC" id="3.5.1.77" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000032">
        <property type="protein sequence ID" value="CTQ77196.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008193828.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000032.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04832"/>
    <dbReference type="EnsemblBacteria" id="CTQ77196">
        <property type="protein sequence ID" value="CTQ77196"/>
        <property type="gene ID" value="LAX5112_04832"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047417">
        <property type="term" value="F:N-carbamoyl-D-amino acid hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006807">
        <property type="term" value="P:nitrogen compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07572">
        <property type="entry name" value="nit"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003010">
        <property type="entry name" value="C-N_Hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036526">
        <property type="entry name" value="C-N_Hydrolase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045254">
        <property type="entry name" value="Nit1/2_C-N_Hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001110">
        <property type="entry name" value="UPF0012_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00795">
        <property type="entry name" value="CN_hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56317">
        <property type="entry name" value="SSF56317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50263">
        <property type="entry name" value="CN_HYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01227">
        <property type="entry name" value="UPF0012"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CN hydrolase" evidence="3">
        <location>
            <begin position="4"/>
            <end position="252"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50263"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ77196.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="284" mass="30823" checksum="855BC11592F39E3E" modified="2015-12-09" version="1">MATFKAACIQLRSGKSIEQNASVAEELIRQAAEAGAIYIQTPEMSNVLVRSRDELMARIGSGSADPFLKMAQTVASELNVSLHLGSLAVLKDSGKVANRAYFIGTDGAIQASYDKIHMFDVDLPNGESWRESATYDPGQEAILTDAPFGRVGMAVCYDVRFPAVFREQARRGAEILTAPAAFTRQTGEAHWHVLQRARAIENGAYMISAAQGGVHEDGRETYGHSLMADPWGEVIAELDHDEPGFVVAEVETENVAKARTRIPAITNERAFTSRIADGLKEIPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASA4</accession>
    <name>A0A0M7ASA4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Dihydroxyacetone kinase</fullName>
            <ecNumber evidence="7">2.7.1.29</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">dhaK</name>
        <name evidence="7" type="ORF">LAX5112_04596</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.7.1.29" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000027">
        <property type="protein sequence ID" value="CTQ76454.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673787.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000027.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04596"/>
    <dbReference type="EnsemblBacteria" id="CTQ76454">
        <property type="protein sequence ID" value="CTQ76454"/>
        <property type="gene ID" value="LAX5112_04596"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004371">
        <property type="term" value="F:glycerone kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006071">
        <property type="term" value="P:glycerol metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.340">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004006">
        <property type="entry name" value="DhaK_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004007">
        <property type="entry name" value="DhaL_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036117">
        <property type="entry name" value="DhaL_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02733">
        <property type="entry name" value="Dak1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02734">
        <property type="entry name" value="Dak2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01120">
        <property type="entry name" value="Dak2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101473">
        <property type="entry name" value="SSF101473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51481">
        <property type="entry name" value="DHAK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51480">
        <property type="entry name" value="DHAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 7" id="KW-0418">Kinase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="DhaK" evidence="6">
        <location>
            <begin position="7"/>
            <end position="323"/>
        </location>
    </feature>
    <feature type="domain" description="DhaL" evidence="5">
        <location>
            <begin position="352"/>
            <end position="539"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51480"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51481"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ76454.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="545" mass="56170" checksum="FA441AEBCC32AFD9" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASQ7</accession>
    <name>A0A0M7ASQ7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04862</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000033">
        <property type="protein sequence ID" value="CTQ77290.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674010.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000033.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77290">
        <property type="protein sequence ID" value="CTQ77290"/>
        <property type="gene ID" value="LAX5112_04862"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008928">
        <property type="entry name" value="6-hairpin_glycosidase_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48208">
        <property type="entry name" value="SSF48208"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809920" evidence="1">
        <location>
            <begin position="24"/>
            <end position="634"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77290.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="634" mass="68766" checksum="02AD92BC0996D9D4" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASW8</accession>
    <name>A0A0M7ASW8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Phage protein C</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_05035</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000045">
        <property type="protein sequence ID" value="CTQ77737.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_001224515.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000045.1"/>
    </dbReference>
    <dbReference type="SMR" id="A0A0M7ASW8"/>
    <dbReference type="EnsemblBacteria" id="CTQ77737">
        <property type="protein sequence ID" value="CTQ77737"/>
        <property type="gene ID" value="LAX5112_05035"/>
    </dbReference>
    <dbReference type="GeneID" id="39482432"/>
    <dbReference type="GeneID" id="60824920"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019073">
        <property type="term" value="P:viral DNA genome packaging"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016407">
        <property type="entry name" value="C-protein"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12025">
        <property type="entry name" value="Phage_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004155">
        <property type="entry name" value="Phage_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ77737.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="86" mass="10081" checksum="28785348340CCE3C" modified="2015-12-09" version="1">MRKFDLSLRSSRSSYFATFRHQLTILSKTDALDEEKWLNMLGTFVKDWFRYESHFVHGRDSLVDILKERGLLSESDAVQPLIGKKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AV65</accession>
    <name>A0A0M7AV65_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">YceI domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_05012</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000040">
        <property type="protein sequence ID" value="CTQ77683.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_05012"/>
    <dbReference type="EnsemblBacteria" id="CTQ77683">
        <property type="protein sequence ID" value="CTQ77683"/>
        <property type="gene ID" value="LAX5112_05012"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.128.110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007372">
        <property type="entry name" value="Lipid/polyisoprenoid-bd_YceI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036761">
        <property type="entry name" value="TTHA0802/YceI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04264">
        <property type="entry name" value="YceI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00867">
        <property type="entry name" value="YceI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101874">
        <property type="entry name" value="SSF101874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="YceI" evidence="1">
        <location>
            <begin position="32"/>
            <end position="199"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00867"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77683.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="202" mass="21747" checksum="88D1C64ED4429449" modified="2015-12-09" version="1">MALAGYFKSTVTGATISAGLVISTAAQAEPHRYELDPEHTTIAFMVDHLGYADTLGVFLEFEGSFTYDMDTQKLSDLKVTVQTASVESFNEARDNHVLNKDFLDVANHPVMTFTANGGTPADDTSGVVAGELTLLGKTQPLTLDVTLNKAAKYPFGHGRFTLGISAQGVVKRSDFGMTYAVENGFVGDDVQVIIETEAWRAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZMN4</accession>
    <name>A0A0M6ZMN4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_00004</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63617.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670072.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00004"/>
    <dbReference type="EnsemblBacteria" id="CTQ63617">
        <property type="protein sequence ID" value="CTQ63617"/>
        <property type="gene ID" value="LAX5112_00004"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009306">
        <property type="term" value="P:protein secretion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007452">
        <property type="entry name" value="TamB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04357">
        <property type="entry name" value="TamB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="7"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
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            <end position="136"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
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            <begin position="118"/>
            <end position="136"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ63617.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="1447" mass="147196" checksum="197FC9B7C27B3F1B" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZNH8</accession>
    <name>A0A0M6ZNH8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative diguanylate cyclase YcdT</fullName>
            <ecNumber evidence="3">2.7.7.65</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ycdT_1</name>
        <name evidence="3" type="ORF">LAX5112_00045</name>
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        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
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            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.7.7.65" evidence="3"/>
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        <property type="protein sequence ID" value="CTQ63726.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00045"/>
    <dbReference type="EnsemblBacteria" id="CTQ63726">
        <property type="protein sequence ID" value="CTQ63726"/>
        <property type="gene ID" value="LAX5112_00045"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052621">
        <property type="term" value="F:diguanylate cyclase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd01949">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000160">
        <property type="entry name" value="GGDEF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00990">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00267">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00254">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50887">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="40"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="67"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="95"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="123"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="155"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="190"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="domain" description="GGDEF" evidence="2">
        <location>
            <begin position="254"/>
            <end position="386"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ63726.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="408" mass="44263" checksum="7BB41C4A47193F7E" modified="2015-12-09" version="1">MLDVKTILFSLVVAELTASAVLCFLFFFWKHRDRAGHLSFGLWSIAFLLGAIGTLLISFRGVLPDDLTIIAANFLILFATGLRRSGVAAFFCQPLRLWIAAGFAGVWLLLCSVPEIATTLSSRVAFVQPVMMLYIAWSAIICLRWNTENLVTPKVYAFSAALETSAHFSLLTALGFGAGNGLFEAISGHVILIALLLIMVAMVLSMFTALAMPIERSLLQFKSAAYRDCLTGLPNRRAVFERAEAFKSVSGANNCLTVIRFDIDEFKRVNDKHGHATGDLVLQVFGRVCEETRPVDTVAGRLGGDEFVILSTRMEPSKARILAERIRAHFAAACSEETEGAVQVGLSAGVSSVPLDLGLDEALEIADRAMYEAKASGRGKTVVGSAEKARVFSGAEEPQFAFYNPHPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQD2</accession>
    <name>A0A0M6ZQD2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Multiple resistance and pH homeostasis protein D</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">mrpD_1</name>
        <name evidence="4" type="ORF">LAX5112_00468</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64979.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670423.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00468"/>
    <dbReference type="EnsemblBacteria" id="CTQ64979">
        <property type="protein sequence ID" value="CTQ64979"/>
        <property type="gene ID" value="LAX5112_00468"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008137">
        <property type="term" value="F:NADH dehydrogenase (ubiquinone) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042773">
        <property type="term" value="P:ATP synthesis coupled electron transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003918">
        <property type="entry name" value="NADH_UbQ_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001750">
        <property type="entry name" value="ND/Mrp_mem"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00361">
        <property type="entry name" value="Proton_antipo_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01437">
        <property type="entry name" value="NUOXDRDTASE4"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="6"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="36"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="83"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="115"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="138"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="168"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="210"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="242"/>
            <end position="263"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="275"/>
            <end position="298"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="310"/>
            <end position="329"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="335"/>
            <end position="353"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="374"/>
            <end position="390"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="410"/>
            <end position="429"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="450"/>
            <end position="472"/>
        </location>
    </feature>
    <feature type="domain" description="Proton_antipo_M" evidence="3">
        <location>
            <begin position="133"/>
            <end position="424"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU000320"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00361"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ64979.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="513" mass="55204" checksum="F1855EC6A582DF9D" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQN2</accession>
    <name>A0A0M6ZQN2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">TRAP transporter solute receptor, TAXI family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00290</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64420.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00290"/>
    <dbReference type="EnsemblBacteria" id="CTQ64420">
        <property type="protein sequence ID" value="CTQ64420"/>
        <property type="gene ID" value="LAX5112_00290"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011852">
        <property type="entry name" value="TRAP_TAXI"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42941">
        <property type="entry name" value="PTHR42941"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16868">
        <property type="entry name" value="NMT1_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02122">
        <property type="entry name" value="TRAP_TAXI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0675">Receptor</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809037" evidence="1">
        <location>
            <begin position="23"/>
            <end position="329"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64420.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="329" mass="34709" checksum="816382ADC106612F" modified="2015-12-09" version="1">MKFTMITGAVAIAAMTATSAFAQDEDRTGWPESFTVGTASQGGTYFAYGSGWANLVADELGISGGGEVTGGPMQNMALVHTGDAQFGMTTMGPAAESLGGTNPIAPGLQMTNACAMFPMYQTPFSITALSSSGITSVADIPDGAKIGFGPAGSTSDTYFPRMMEELGVNFERRNGGWSDLGGQLQDGLLDVIAFAAGVPVPAVSQLEVQTDINIIEFTEEERAKILEAFPVSEFAIASDTYTTLENDARSVSMWNFAVANCDLPASFVKAAVNVVMSDNDRMVNIHKAARSTLPENWTKNTVLKWHPGAAEWFTENAGADIPADMIHGN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZR36</accession>
    <name>A0A0M6ZR36_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">ATP-dependent zinc metalloprotease FtsH</fullName>
            <ecNumber evidence="7">3.4.24.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">ftsH4</name>
        <name evidence="7" type="synonym">ftsH</name>
        <name evidence="10" type="ORF">LAX5112_00375</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="7">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="7">Binds 1 zinc ion per subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Homohexamer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cell membrane</location>
            <topology evidence="7">Multi-pass membrane protein</topology>
            <orientation evidence="7">Cytoplasmic side</orientation>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the AAA ATPase family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 7">In the C-terminal section; belongs to the peptidase M41 family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="7">In the central section; belongs to the AAA ATPase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="3.4.24.-" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64712.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670356.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00375"/>
    <dbReference type="EnsemblBacteria" id="CTQ64712">
        <property type="protein sequence ID" value="CTQ64712"/>
        <property type="gene ID" value="LAX5112_00375"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004176">
        <property type="term" value="F:ATP-dependent peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004222">
        <property type="term" value="F:metalloendopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030163">
        <property type="term" value="P:protein catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.760">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01458">
        <property type="entry name" value="FtsH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041569">
        <property type="entry name" value="AAA_lid_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003959">
        <property type="entry name" value="ATPase_AAA_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003960">
        <property type="entry name" value="ATPase_AAA_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005936">
        <property type="entry name" value="FtsH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011546">
        <property type="entry name" value="Pept_M41_FtsH_extracell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000642">
        <property type="entry name" value="Peptidase_M41"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037219">
        <property type="entry name" value="Peptidase_M41-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00004">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17862">
        <property type="entry name" value="AAA_lid_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06480">
        <property type="entry name" value="FtsH_ext"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01434">
        <property type="entry name" value="Peptidase_M41"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF140990">
        <property type="entry name" value="SSF140990"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01241">
        <property type="entry name" value="FtsH_fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00674">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 7 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 7 10" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6 7 10" id="KW-0482">Metalloprotease</keyword>
    <keyword evidence="3 7 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="2 7 10" id="KW-0645">Protease</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="7" id="KW-0862">Zinc</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="7"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="domain" description="AAA" evidence="9">
        <location>
            <begin position="189"/>
            <end position="328"/>
        </location>
    </feature>
    <feature type="active site" evidence="7">
        <location>
            <position position="420"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="197"/>
            <end position="204"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="419"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <note>catalytic</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="423"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <note>catalytic</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="496"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <note>catalytic</note>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010044"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01458"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU003651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ64712.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="608" mass="67315" checksum="22C878474DD65192" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRK7</accession>
    <name>A0A0M6ZRK7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">virA</name>
        <name evidence="7" type="ORF">LAX5112_00194</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
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        <property type="protein sequence ID" value="CTQ64144.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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    <dbReference type="EnsemblBacteria" id="CTQ64144">
        <property type="protein sequence ID" value="CTQ64144"/>
        <property type="gene ID" value="LAX5112_00194"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
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        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0808">Transferase</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="25"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="154"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="6">
        <location>
            <begin position="278"/>
            <end position="518"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="4">
        <location>
            <begin position="301"/>
            <end position="335"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ64144.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="533" mass="58601" checksum="CF616BE60CFA5097" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSA4</accession>
    <name>A0A0M6ZSA4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Flp pilus assembly protein TadG</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00547</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65207.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670558.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00547"/>
    <dbReference type="EnsemblBacteria" id="CTQ65207">
        <property type="protein sequence ID" value="CTQ65207"/>
        <property type="gene ID" value="LAX5112_00547"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ65207.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="170" mass="18335" checksum="6C004FABC1CE14CC" modified="2015-12-09" version="1">MILPFMLVLMIGMVELTDALNVDRKVSRMANAVTDLVAQAQTVTRSELNAYLQLGETILKPYPSDDLTFVIAGVTFQANGVPEVDWSYQRKAGVGGPASDWSAGDEPPITLPATLVSPNTSIVVGAVTLGYAPPLAGIFTQYYSRDSVITLSDTYYLRPRLVGTIQCTDC</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZST6</accession>
    <name>A0A0M6ZST6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">DNA recombination protein RmuC homolog</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">rmuC</name>
        <name evidence="6" type="ORF">LAX5112_00531</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Involved in DNA recombination.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the RmuC family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65160.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670554.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00531"/>
    <dbReference type="EnsemblBacteria" id="CTQ65160">
        <property type="protein sequence ID" value="CTQ65160"/>
        <property type="gene ID" value="LAX5112_00531"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003798">
        <property type="entry name" value="DNA_recombination_RmuC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30563">
        <property type="entry name" value="PTHR30563"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02646">
        <property type="entry name" value="RmuC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="371"/>
            <end position="395"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003416"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00021840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ65160.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="395" mass="43950" checksum="C513CE649F4816E0" modified="2015-12-09" version="1">MNEILFELSGRPITVLETAVGGGLFLLALIVWLIMKTMREIRLRAEADTAATERIHELESHLSQLLKSQGEMTGRMQTMAEVFGSRQSDMMRAVNERLDGMGHKLGLSMADTSKRTQDGLRHLHERLAVIDRAQATITDLSGQVGQLQAILSNKQTRGAFGQGRMEAIIQDQLAPSGYSFQSTLSNNSRPDCLIHMPNGAPPLAIDAKFPLEAFNLIRNAETDEQLKYAQAQFRRDFTKHIQDISEKYLLPGETQDTAFLFVPSESIFAELNERFEDLIQKAHRARVVIVSPSLLMLSIQVIHSVLRDAKMREQAHLIQAEVGHLIADVGRLNDRVGKLQSHFAQANKDIDQILISSEKIGKRSRKIEDLELGEASSGADPQGDDAPQLAMAPDR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTB9</accession>
    <name>A0A0M6ZTB9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Sulfide dehydrogenase [flavocytochrome c] flavoprotein chain</fullName>
            <ecNumber evidence="3">1.8.2.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">fccB</name>
        <name evidence="3" type="ORF">LAX5112_00844</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.8.2.3" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66029.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670748.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00844"/>
    <dbReference type="EnsemblBacteria" id="CTQ66029">
        <property type="protein sequence ID" value="CTQ66029"/>
        <property type="gene ID" value="LAX5112_00844"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070225">
        <property type="term" value="F:sulfide dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.760.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023753">
        <property type="entry name" value="FAD/NAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016156">
        <property type="entry name" value="FAD/NAD-linked_Rdtase_dimer_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015323">
        <property type="entry name" value="FlavoCytC_S_DH_flav-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037092">
        <property type="entry name" value="FlavoCytC_S_DH_flav-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006311">
        <property type="entry name" value="TAT_signal"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09242">
        <property type="entry name" value="FCSD-flav_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07992">
        <property type="entry name" value="Pyr_redox_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55424">
        <property type="entry name" value="SSF55424"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Pyr_redox_2" evidence="1">
        <location>
            <begin position="33"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="domain" description="FCSD-flav_bind" evidence="2">
        <location>
            <begin position="358"/>
            <end position="423"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF09242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ66029.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="425" mass="45356" checksum="BEAF12DFB4DBB5F7" modified="2015-12-09" version="1">MPNLTRRSFGLLVGAGATSLALPYYARAQGKPKVVVIGGGAGGATAARYMAKDAGEDLDVTLIEANPAYTTCFFSNLYLGGFRDFDSITHGYDTLASNYGITVVNGMADAVDRDAKMVVMADGSKVPYDRLVVSPGIDLIYDSVPGYSEEAAEIMPHSWKAGPQTQLLKAKLDAIENGQQIVMVAPPNPYRCPPGPYERVSMMAHILKSKGLNDSKIVIIDPKPKFSKQALFQEGWDKHYPGMIEWYGPDVHGGIVKVDASTGEVETDLDTFQGDLVNVIPAQKAGMIASKAALTNDSGFCAIDPASMRSKADDSIFVIGDACIAGDMPKSGFSANSQAKVAAMTIRGDLTGSRVFPAKYSNTCWSLIETNDGVKVGAQYAPAEEKIASTSKFISQTGEDAGLRQATYEESIGWYKGITTDMFGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTM6</accession>
    <name>A0A0M6ZTM6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">L-arabinose transport system permease protein AraQ</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">araQ_2</name>
        <name evidence="7" type="ORF">LAX5112_00711</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65657.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670648.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00711"/>
    <dbReference type="EnsemblBacteria" id="CTQ65657">
        <property type="protein sequence ID" value="CTQ65657"/>
        <property type="gene ID" value="LAX5112_00711"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="78"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="111"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="142"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="186"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="246"/>
            <end position="265"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="74"/>
            <end position="265"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ65657.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="279" mass="31161" checksum="29AC50514DABD9BF" modified="2015-12-09" version="1">MNQARTNPFNAMAMHGALILYTLIALFPVFIILINSFKSRKFIFREPLALPNAESFSMIGYQTVMKQGDFFLYFQNSMIVTVASLFFILLFGAMAAFALSEYRFRGNMILGLYLALGIMVPIRIGTVAILEMMVSTGLVNTLWALILVYTAQGLPLAVFILTEFMRQVSDDLKNAARVDGLSEYTIFFRLVLPLVRPALATVAVFNMIPIWNDLWFPLILAPAEETKTLTLGSQVFIGQFVTDWNAVLSALSMAILPVLILYVIFSRQLIRGLTSGAVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTZ5</accession>
    <name>A0A0M6ZTZ5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Cytosine deaminase</fullName>
            <ecNumber evidence="2">3.5.4.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">codA_1</name>
        <name evidence="2" type="ORF">LAX5112_00673</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.5.4.1" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65550.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670621.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00673"/>
    <dbReference type="EnsemblBacteria" id="CTQ65550">
        <property type="protein sequence ID" value="CTQ65550"/>
        <property type="gene ID" value="LAX5112_00673"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102480">
        <property type="term" value="F:5-fluorocytosine deaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004131">
        <property type="term" value="F:cytosine deaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013108">
        <property type="entry name" value="Amidohydro_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011059">
        <property type="entry name" value="Metal-dep_hydrolase_composite"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032466">
        <property type="entry name" value="Metal_Hydrolase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07969">
        <property type="entry name" value="Amidohydro_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51338">
        <property type="entry name" value="SSF51338"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51556">
        <property type="entry name" value="SSF51556"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Amidohydro_3" evidence="1">
        <location>
            <begin position="211"/>
            <end position="396"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07969"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65550.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="439" mass="47804" checksum="5B077D1DB7F24349" modified="2015-12-09" version="1">MKPGWGAGYKGTGIIRNATVPACLLKGLQQTSVSELTARDIVFENGKLTQIAPAGTLPEGAGGLDLDGGLVLPTLVDVHTHLDKGHIWPREPNPDGTFQGALQAVGRDRSAYWCAEDVRARMDFSLKCAYAHGTGAIRTHLDSLPPQDDITWPIFAEMRSEWAGRIELQGVCLFGIDRLAEDNGYLHSIADRVSASGGVLGAVTYMVPDVDQHLESVFKAAMDRGLDLDFHVDETLDPAADTLRRIADVALRLGFDGKILCGHCCSLSVHSDDNISNTLDLVAEAGISVVSLPMCNMYLQDRTQGRTPRKRGVTLLHEMRARGIQVCVASDNTRDPFYAYGDMDLVEVYTQATRILHLDHPVGDWIHAVTETPASIMGLPTGRIAVGAPADLLLFHARNWNELLSRPAGPRRVLRAGCSIDQALPDYRELDRLLQKGTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUN5</accession>
    <name>A0A0M6ZUN5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Inner membrane amino-acid ABC transporter permease protein YecS</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">yecS_2</name>
        <name evidence="10" type="ORF">LAX5112_00750</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="8">Cell membrane</location>
            <topology evidence="8">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65770.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670675.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00750"/>
    <dbReference type="EnsemblBacteria" id="CTQ65770">
        <property type="protein sequence ID" value="CTQ65770"/>
        <property type="gene ID" value="LAX5112_00750"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006865">
        <property type="term" value="P:amino acid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010065">
        <property type="entry name" value="AA_ABC_transptr_permease_3TM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043429">
        <property type="entry name" value="ArtM/GltK/GlnP/TcyL/YhdX-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30614">
        <property type="entry name" value="PTHR30614"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01726">
        <property type="entry name" value="HEQRo_perm_3TM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0029">Amino-acid transport</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="8" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="27"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="56"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="99"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="140"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="190"/>
            <end position="207"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="9">
        <location>
            <begin position="23"/>
            <end position="211"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ65770.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="220" mass="23931" checksum="85E154BEF78733FB" modified="2015-12-09" version="1">MQQSISFFSGFGVNDLWFLGEAALRTLWISAVSISAGTVLGVLFGWILYEAKFLGAVTLAPILDVFRSVPLIIQLVLFYNFAPIIGLDFGPFGSGVVVLTLYAASLVANVARGGIEAVGKPMRRAARSLGMSYWQDMRHVVFPIGGRAVFPSWVGVALGVMKDSALVSVLGYVELLKASQILITRTQEPFLILAIAGAFYFALSYPISRYAAQLEKRWAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUZ2</accession>
    <name>A0A0M6ZUZ2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">N-formylglutamate deformylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00850</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66046.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670752.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00850"/>
    <dbReference type="EnsemblBacteria" id="CTQ66046">
        <property type="protein sequence ID" value="CTQ66046"/>
        <property type="gene ID" value="LAX5112_00850"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010247">
        <property type="entry name" value="HutG_amidohyd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007709">
        <property type="entry name" value="N-FG_amidohydro"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05013">
        <property type="entry name" value="FGase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02017">
        <property type="entry name" value="hutG_amidohyd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ66046.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="283" mass="31098" checksum="4BDA6CD94FCD8A5A" modified="2015-12-09" version="1">MQPVEVFHGDGPVVLGVPHAGTYVPPEIWSDLNEVGQKLADTDWHVDQLYSDLLPDSDLLPGATMVKANFHRYVIDANRDPEGVSLYPGQNTTTLCPTTDFDGRPIYLDGSEPDPEEIEKRRLAWHTPYHAALKSELERVRKKHGIAILYDCHSIRSVVPYLFEGTLPDFNTGTNGGATCAPAIEKAVVDLTSKAEGYSSILNGRFKGGWTTRHYGQPARGFHAIQMELAQSTHLVGEDTPFAYDEVKAGRLRVHLKEILSALADLAPALVQHSKNPEGANHG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZV95</accession>
    <name>A0A0M6ZV95_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DUF2062 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01060</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66695.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008189263.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01060"/>
    <dbReference type="EnsemblBacteria" id="CTQ66695">
        <property type="protein sequence ID" value="CTQ66695"/>
        <property type="gene ID" value="LAX5112_01060"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018639">
        <property type="entry name" value="DUF2062"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09835">
        <property type="entry name" value="DUF2062"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="36"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="61"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="83"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="145"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="domain" description="DUF2062" evidence="2">
        <location>
            <begin position="27"/>
            <end position="175"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF09835"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ66695.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="200" mass="22510" checksum="E7F8B59894915763" modified="2015-12-09" version="1">MLFRRRNRPTHVERLRVAVWPRHSWARSTRYFGKRVLRLTATPHAIAIGFAAGAFSSCTPLIGFHFLTAFALAWVLRGNMIAAALGTSIGNPLTFPFIWAFTYKIGQWVLYGQAPDADPHAVHAQFQSSLFAKSLDSLLPMVKPMFIGAVPMGLVLGTVSYFIVYKSVEVYQRRRKVTLDARNKRLFPPPNRSFDDDPGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVB5</accession>
    <name>A0A0M6ZVB5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative HTH-type transcriptional regulator YbbH</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ybbH_1</name>
        <name evidence="3" type="ORF">LAX5112_00642</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65474.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040450941.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00642"/>
    <dbReference type="EnsemblBacteria" id="CTQ65474">
        <property type="protein sequence ID" value="CTQ65474"/>
        <property type="gene ID" value="LAX5112_00642"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0097367">
        <property type="term" value="F:carbohydrate derivative binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901135">
        <property type="term" value="P:carbohydrate derivative metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd05013">
        <property type="entry name" value="SIS_RpiR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000281">
        <property type="entry name" value="HTH_RpiR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035472">
        <property type="entry name" value="RpiR-like_SIS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001347">
        <property type="entry name" value="SIS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046348">
        <property type="entry name" value="SIS_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01418">
        <property type="entry name" value="HTH_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01380">
        <property type="entry name" value="SIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53697">
        <property type="entry name" value="SSF53697"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51071">
        <property type="entry name" value="HTH_RPIR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51464">
        <property type="entry name" value="SIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH rpiR-type" evidence="1">
        <location>
            <begin position="15"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="domain" description="SIS" evidence="2">
        <location>
            <begin position="141"/>
            <end position="278"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51071"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ65474.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="305" mass="33297" checksum="0F503B2FAB300053" modified="2015-12-09" version="1">MNDMNVPKSDLKAPQTVLDDLAAELEVLTPELRKAASYVLENPNDVGVSSIREIADAAGVKPNTFVRMARSVGFEGYEDFRQPFREAIRSRGTDFPDRARWLQSLSKGGQLGELFAEMAACAISNIENTFAATDANAMKAAADAIVNARHTYVLGVGVNNSNARNFTYLADMAVDTIWTIPRMGSVATDDLARADKRDVLLAMTCKPYRTDVIEAVEVAREQGLTIVAISDSPASPIVVGSDHAFIIDAETPQFFPSSVSTIALLETLLAFVIADAPPDVVANIEKFHTRRHAMGLYQEEWKDRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZW76</accession>
    <name>A0A0M6ZW76_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">LIV-I protein F</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">livF_7</name>
        <name evidence="6" type="ORF">LAX5112_01179</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67015.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01179"/>
    <dbReference type="EnsemblBacteria" id="CTQ67015">
        <property type="protein sequence ID" value="CTQ67015"/>
        <property type="gene ID" value="LAX5112_01179"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="5"/>
            <end position="234"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ67015.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="234" mass="25493" checksum="2682E810E900FD53" modified="2015-12-09" version="1">MNGMLSVRGLNAFYGKSHVLRGVDLEVGEGEVVALLGRNGVGRSTTVKAIMGEVAPKGDIWFKGENISGLANHEIALKGLGYVPENRDIFPGLTVRQNLVLGIKDMKRPGRWAIEDMLTMFPNLAERADTPAGVLSGGEKQMLTICRTLMGDPQLIMIDEPTEGLAPRIVAQVGELLSEIARAGVSILLVEQKLSIALKIASRVYVMGHGEIVYSGTPQDFLTRDDIRREWLEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZW85</accession>
    <name>A0A0M6ZW85_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Arabinose import ATP-binding protein AraG</fullName>
            <ecNumber evidence="5">3.6.3.17</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">araG</name>
        <name evidence="5" type="ORF">LAX5112_01180</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.6.3.17" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67018.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671023.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01180"/>
    <dbReference type="EnsemblBacteria" id="CTQ67018">
        <property type="protein sequence ID" value="CTQ67018"/>
        <property type="gene ID" value="LAX5112_01180"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032823">
        <property type="entry name" value="BCA_ABC_TP_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12399">
        <property type="entry name" value="BCA_ABC_TP_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="6"/>
            <end position="247"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="38"/>
            <end position="45"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ67018.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="259" mass="27815" checksum="7D701BC871E6FE50" modified="2015-12-09" version="1">MSTPALSIRDLTKNFGPAEIIRGVTLDILPGERHAIIGPNGAGKSTLFNLISGLHRPTSGSVHLGGQKISGRKAHEINHMGLSRSFQVSNIFANMTVRENVRCAVLWSLGTGYSFWRNIGNLRHVQDRTAEVLETVGMIDKAALPAASLPYADQRTLEIAITIAGGADVILLDEPTAGMSHSETERAVALIERATRGKTLIIVEHDMSVVFELSDRISVLVYGEIIASGPPEAIRGDAKVREAYLGDEAEDLPMVEGAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWM5</accession>
    <name>A0A0M6ZWM5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Serine hydroxymethyltransferase</fullName>
            <shortName evidence="7">SHMT</shortName>
            <shortName evidence="7">Serine methylase</shortName>
            <ecNumber evidence="7">2.1.2.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">glyA1</name>
        <name evidence="7" type="synonym">glyA</name>
        <name evidence="10" type="ORF">LAX5112_01039</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>(6R)-5,10-methylene-5,6,7,8-tetrahydrofolate + glycine + H2O = (6S)-5,6,7,8-tetrahydrofolate + L-serine</text>
            <dbReference type="Rhea" id="RHEA:15481"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15636"/>
            <dbReference type="ChEBI" id="CHEBI:33384"/>
            <dbReference type="ChEBI" id="CHEBI:57305"/>
            <dbReference type="ChEBI" id="CHEBI:57453"/>
            <dbReference type="EC" id="2.1.2.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 7 8">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="2 7">Amino-acid biosynthesis; glycine biosynthesis; glycine from L-serine: step 1/1.</text>
    </comment>
    <comment type="pathway">
        <text evidence="7">One-carbon metabolism; tetrahydrofolate interconversion.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 7">Belongs to the SHMT family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.1.2.1" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66636.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01039"/>
    <dbReference type="EnsemblBacteria" id="CTQ66636">
        <property type="protein sequence ID" value="CTQ66636"/>
        <property type="gene ID" value="LAX5112_01039"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00193"/>
    <dbReference type="UniPathway" id="UPA00288">
        <property type="reaction ID" value="UER01023"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004372">
        <property type="term" value="F:glycine hydroxymethyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019264">
        <property type="term" value="P:glycine biosynthetic process from serine"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035999">
        <property type="term" value="P:tetrahydrofolate interconversion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd00378">
        <property type="entry name" value="SHMT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00051">
        <property type="entry name" value="SHMT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001085">
        <property type="entry name" value="Ser_HO-MeTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019798">
        <property type="entry name" value="Ser_HO-MeTrfase_PLP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039429">
        <property type="entry name" value="SHMT-like_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11680">
        <property type="entry name" value="PTHR11680"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00464">
        <property type="entry name" value="SHMT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000412">
        <property type="entry name" value="SHMT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00096">
        <property type="entry name" value="SHMT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="10" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="4 7" id="KW-0554">One-carbon metabolism</keyword>
    <keyword evidence="6 7 8" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 7 10" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="SHMT" evidence="9">
        <location>
            <begin position="20"/>
            <end position="395"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="7">
        <location>
            <begin position="137"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="47"/>
        </location>
        <ligand>
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="67"/>
        </location>
        <ligand>
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="69"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="76"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="77"/>
        </location>
        <ligand>
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="111"/>
        </location>
        <ligand>
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="133"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="188"/>
        </location>
        <ligand>
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="216"/>
        </location>
        <ligand>
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="241"/>
        </location>
        <ligand>
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="248"/>
        </location>
        <ligand>
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="374"/>
        </location>
        <ligand>
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </ligand>
    </feature>
    <feature type="modified residue" description="N6-(pyridoxal phosphate)lysine" evidence="7 8">
        <location>
            <position position="242"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004697"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006376"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022563"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00051"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR000412-50"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF00464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ66636.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="435" mass="46438" checksum="D8F379E068E0CC1F" modified="2015-12-09" version="1">MSLMESSDQSVQSDFFTRGLAEADPELFGTIEKELGRQQHEIELIASENIVSRAVLEAQGSVLTNKYAEGYPGRRYYGGCEYVDMAENLAIDRAKKLFGCGFANVQPNSGSQANQAVFLALIKPGDTILGMSLDAGGHLTHGAKPNLSGKWFNAVQYGLNVETGLIDYDAMAALARETKPALIIAGGSAYSRQIDFAKFREVADEVGAYLMVDMAHFSGLVAAGEHPNPFPYADVATTTTHKTLRGPRGGMVLTDKEDISKKINSAVFPGLQGGPLMHVIAAKAVAFGEALTDDFKSYIRAVRENAQVLAETLREGGMDIVSDGTDTHLMLVDLRPKMLTGRDAEKSLGLANITCNKNGVPNDPQKPMITSGVRLGTPAATTRGFGVAEFREVGLLITEVLDGLKSANSEDGNAAVEAAVKAKVEALTARFPIYG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWN2</accession>
    <name>A0A0M6ZWN2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01251</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67179.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67179">
        <property type="protein sequence ID" value="CTQ67179"/>
        <property type="gene ID" value="LAX5112_01251"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67179.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="57" mass="6546" checksum="35A62035DE4B1760" modified="2015-12-09" version="1">MKTTLFKPEPGTANQTAQTLRDLVKRYGDTQRAARALCVSEAWIWNRLPADDREVKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWV0</accession>
    <name>A0A0M6ZWV0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">SsrA-binding protein</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">Small protein B</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3 5" type="primary">smpB</name>
        <name evidence="5" type="ORF">LAX5112_01072</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA; the nascent peptide is terminated with the 'tag peptide' encoded by the tmRNA and targeted for degradation. The ribosome is freed to recommence translation, which seems to be the essential function of trans-translation.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cytoplasm</location>
        </subcellularLocation>
        <text evidence="3">The tmRNA-SmpB complex associates with stalled 70S ribosomes.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the SmpB family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66731.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008196682.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01072"/>
    <dbReference type="EnsemblBacteria" id="CTQ66731">
        <property type="protein sequence ID" value="CTQ66731"/>
        <property type="gene ID" value="LAX5112_01072"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070929">
        <property type="term" value="P:trans-translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd09294">
        <property type="entry name" value="SmpB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.280.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00023">
        <property type="entry name" value="SmpB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023620">
        <property type="entry name" value="SmpB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000037">
        <property type="entry name" value="SsrA-bd_prot"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020081">
        <property type="entry name" value="SsrA-bd_prot_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30308">
        <property type="entry name" value="PTHR30308"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01668">
        <property type="entry name" value="SmpB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF74982">
        <property type="entry name" value="SSF74982"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00086">
        <property type="entry name" value="smpB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01317">
        <property type="entry name" value="SSRP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0694">RNA-binding</keyword>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="134"/>
            <end position="159"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ66731.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="159" mass="18404" checksum="2544BF90B65BCF0C" modified="2015-12-09" version="1">MAPKKGGHPGRTIISDNRKARFNYEIEDTLEAGIELKGTEVKSLRTGKANIGESYAAEHKGEIWIYNVYIPEYLQGNRFNHEPRRPRKLLLHKREIGKLAGAVQKDGKTIVPLKLYFNEQGRAKLELALARGKKLHDKRETEKKRDWQREKSRLMKNIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZX31</accession>
    <name>A0A0M6ZX31_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">GIY-YIG nuclease superfamily protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01322</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67309.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67309">
        <property type="protein sequence ID" value="CTQ67309"/>
        <property type="gene ID" value="LAX5112_01322"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1440.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000305">
        <property type="entry name" value="GIY-YIG_endonuc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035901">
        <property type="entry name" value="GIY-YIG_endonuc_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01541">
        <property type="entry name" value="GIY-YIG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00465">
        <property type="entry name" value="GIYc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82771">
        <property type="entry name" value="SSF82771"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50164">
        <property type="entry name" value="GIY_YIG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GIY-YIG" evidence="1">
        <location>
            <begin position="34"/>
            <end position="110"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50164"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67309.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="128" mass="15269" checksum="D1EE92DA5F6B3999" modified="2015-12-09" version="1">MSIHGWFFRKKLATTSVITGLDPVIHTVFYLRMRRFWVYILAGHKNGTLYTGVTNNLSRRLYQHQQGTGSKFTQKYRVKRLVWYEEHATAERAISREKAIKHWSRAWKIELIEATNPEWFDLGKDLNR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZX97</accession>
    <name>A0A0M6ZX97_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Putative glutamine synthetase 2</fullName>
            <ecNumber evidence="6">6.3.1.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">glnA_1</name>
        <name evidence="6" type="ORF">LAX5112_00885</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Catalyzes the ATP-dependent biosynthesis of glutamine from glutamate and ammonia.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the glutamine synthetase family.</text>
    </comment>
    <dbReference type="EC" id="6.3.1.2" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66143.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670778.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00885"/>
    <dbReference type="EnsemblBacteria" id="CTQ66143">
        <property type="protein sequence ID" value="CTQ66143"/>
        <property type="gene ID" value="LAX5112_00885"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004356">
        <property type="term" value="F:glutamate-ammonia ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006542">
        <property type="term" value="P:glutamine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009399">
        <property type="term" value="P:nitrogen fixation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036651">
        <property type="entry name" value="Gln_synt_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014746">
        <property type="entry name" value="Gln_synth/guanido_kin_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008146">
        <property type="entry name" value="Gln_synth_cat_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00120">
        <property type="entry name" value="Gln-synt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01230">
        <property type="entry name" value="Gln-synt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54368">
        <property type="entry name" value="SSF54368"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55931">
        <property type="entry name" value="SSF55931"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0436">Ligase</keyword>
    <keyword evidence="3" id="KW-0535">Nitrogen fixation</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Gln-synt_C" evidence="5">
        <location>
            <begin position="117"/>
            <end position="372"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00003117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023231"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU000384"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM01230"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ66143.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="455" mass="51220" checksum="D7D80DFE9CF721FD" modified="2015-12-09" version="1">MPGNLTFDALKSLVTSGEIDTVLVCIVDMQGRLMGKRFLAQHFVDSAYEETHCCNYLLATDLEMYTVEGYAATSWSGGYGDYVMKPDLSTIRRIPWLEGTAMVICDVLDHHTHKEVPHSPRAMLKTQVARMNALGLTPIMATELEFFLFEKSFDELRKSGYRDMEPISGYNEDYHILQTTKEEDVMRPIRNGLYAAGIPVENTKGEAEAGQEELNIKYAPALDTAEYHTISKHAVKEIAWAKGRSATFLPKWASDKVGSSSHVHQSLFDKDGNNVFCDPDGEYGMSALMQHYLAGLIKYAPDYTYFLAPYINSYKRFQKGTFAPTKMVWSVDNRTAGFRLCGEGTKALRIECRIGGSDLNPYLALAVQIAAGLKGIEDELPLDKPTSGDVYEAKKAKEIPHTLRDARETLRRSKFLREAFSDAVIDHYARAAEWEIEEFDRAVTDYEIARGFERA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXC1</accession>
    <name>A0A0M6ZXC1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">HTH-type transcriptional repressor CytR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">cytR_1</name>
        <name evidence="5" type="ORF">LAX5112_00904</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66194.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670789.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00904"/>
    <dbReference type="EnsemblBacteria" id="CTQ66194">
        <property type="protein sequence ID" value="CTQ66194"/>
        <property type="gene ID" value="LAX5112_00904"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01392">
        <property type="entry name" value="HTH_LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000843">
        <property type="entry name" value="HTH_LacI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046335">
        <property type="entry name" value="LacI/GalR-like_sensor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00356">
        <property type="entry name" value="LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13377">
        <property type="entry name" value="Peripla_BP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00354">
        <property type="entry name" value="HTH_LACI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50932">
        <property type="entry name" value="HTH_LACI_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH lacI-type" evidence="4">
        <location>
            <begin position="8"/>
            <end position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ66194.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="362" mass="39217" checksum="B4E0EFFCD2AED9D0" modified="2015-12-09" version="1">MSGHRGSVTIDDVARHVGVAKGTVSRVLNNYTDISEATRERILKAVKDLGYQPSATARNLKRGRQDTLGIVIPVGHGNGADPFLSEFIDGIARALDELGIDLLVTTAHSRDHMIETLQRLIARRKVDGFILTRTEVEDPRIAFLSEQGFPFVTHGRSHLPDTHAWFDIDNEKTFADGVRHVYSLGHSRIGFIGGSLELNFALQRRDGYRAGLEALGVPFDPALETIVNLDEEGGLAGAERLLAGNDLPPTALLCVTDALAIGAIQYCRKHGLTVGSDVTIIGYDGLPFGDYLEPPLTTFSQSASEAGSRVARMLIDVLDGKDPKTLKALSEATLIRRASDGAPLKTPEALAEVLRSRLNQQP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXS7</accession>
    <name>A0A0M6ZXS7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01201</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67071.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671040.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67071">
        <property type="protein sequence ID" value="CTQ67071"/>
        <property type="gene ID" value="LAX5112_01201"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67071.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="69" mass="7546" checksum="8D05320BA3ED7D0C" modified="2015-12-09" version="1">MARLKAIKAEIIANGEIPFTVANVGDDVVIIARMPAHRFDEICADGAHFEDWEDDGHTEAEQTTDGYSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXY5</accession>
    <name>A0A0M6ZXY5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01194</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67056.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671035.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01194"/>
    <dbReference type="EnsemblBacteria" id="CTQ67056">
        <property type="protein sequence ID" value="CTQ67056"/>
        <property type="gene ID" value="LAX5112_01194"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012963">
        <property type="entry name" value="DUF1700"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08006">
        <property type="entry name" value="DUF1700"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="78"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="108"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="149"/>
            <end position="169"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67056.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="196" mass="21656" checksum="B16E574387113F60" modified="2015-12-09" version="1">MTQEKFIQDLRHELSGLPGDDIEEIVADYCSYFDEARAAGRDIEDVVAAHGDPRRLAQELRAEMDLRQWEEHHTPQNFWKAVIALGGVAAVDLVVLLPSLLMLGLTALILFFVLSLLGIIGIGTLLDVISDSHDPAQGSATYLVLRSFGHLATSIGGGFLLVFALRKGLVQLTRHMRCRYLLLRTRFPGMGQSNSD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZY75</accession>
    <name>A0A0M6ZY75_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Formate--tetrahydrofolate ligase</fullName>
            <ecNumber evidence="6">6.3.4.3</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Formyltetrahydrofolate synthetase</fullName>
            <shortName evidence="6">FHS</shortName>
            <shortName evidence="6">FTHFS</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6 7" type="primary">fhs</name>
        <name evidence="7" type="ORF">LAX5112_00985</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>(6S)-5,6,7,8-tetrahydrofolate + ATP + formate = (6S)-10-formyltetrahydrofolate + ADP + phosphate</text>
            <dbReference type="Rhea" id="RHEA:20221"/>
            <dbReference type="ChEBI" id="CHEBI:15740"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57453"/>
            <dbReference type="ChEBI" id="CHEBI:57454"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.4.3"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1 6">One-carbon metabolism; tetrahydrofolate interconversion.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the formate--tetrahydrofolate ligase family.</text>
    </comment>
    <dbReference type="EC" id="6.3.4.3" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66484.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451819.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00985"/>
    <dbReference type="EnsemblBacteria" id="CTQ66484">
        <property type="protein sequence ID" value="CTQ66484"/>
        <property type="gene ID" value="LAX5112_00985"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00193"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004329">
        <property type="term" value="F:formate-tetrahydrofolate ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035999">
        <property type="term" value="P:tetrahydrofolate interconversion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd00477">
        <property type="entry name" value="FTHFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01543">
        <property type="entry name" value="FTHFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000559">
        <property type="entry name" value="Formate_THF_ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020628">
        <property type="entry name" value="Formate_THF_ligase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01268">
        <property type="entry name" value="FTHFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00721">
        <property type="entry name" value="FTHFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00722">
        <property type="entry name" value="FTHFS_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 6 7" id="KW-0436">Ligase</keyword>
    <keyword evidence="4 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="2 6" id="KW-0554">One-carbon metabolism</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="65"/>
            <end position="72"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022563"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01543"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ66484.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="556" mass="59535" checksum="1012B52D77B2B663" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZF1</accession>
    <name>A0A0M6ZZF1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative diguanylate cyclase YcdT</fullName>
            <ecNumber evidence="3">2.7.7.65</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ycdT_2</name>
        <name evidence="3" type="ORF">LAX5112_01600</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.7.7.65" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67999.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671380.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01600"/>
    <dbReference type="EnsemblBacteria" id="CTQ67999">
        <property type="protein sequence ID" value="CTQ67999"/>
        <property type="gene ID" value="LAX5112_01600"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052621">
        <property type="term" value="F:diguanylate cyclase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
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        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000160">
        <property type="entry name" value="GGDEF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00990">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00267">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00254">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50887">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="36"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="60"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="91"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="117"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="148"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="187"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="domain" description="GGDEF" evidence="2">
        <location>
            <begin position="247"/>
            <end position="380"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ67999.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="408" mass="44094" checksum="2AAE8E580C1C4DDE" modified="2015-12-09" version="1">MTPLPLFSANMLLLSVFAISFLAISFSARPNRHWRSWAAANALSVGALASFASLSALPPIATYLLPNILLLAGFGFHLHAARSLKQVSTPYGVVIAPAGVYIVVAAFAYVFEVYALAYVASNLLFAALCISIAATYGSAAFRGLVSSLALIIAFGLLALEAGLRIVHGALAEGPFGPGMIDDGTVNIHLMISLIFIAISGAFSMAISFEQLARNNHEDARRDPLTGTFNRREFLRRLEGQLQPATGAHFGLIQFDLDHFKQVNDRFGHVAGDEALVKVCQAIRHHLRRSDCFARLGGEEFGLLLPNVGQEDAVVIAERIRRLVENQSYEFAPDGFQITISGGMYHGTGKGLTPTDLFKIVDSGLYTSKNAGRNRITMAAQENETPKFSEELAQLDGLNQPENELQSAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZF5</accession>
    <name>A0A0M6ZZF5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Disulfide-bond oxidoreductase YfcG</fullName>
            <ecNumber evidence="3">1.8.4.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yfcG</name>
        <name evidence="3" type="ORF">LAX5112_01429</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.8.4.-" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67552.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
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        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01429"/>
    <dbReference type="EnsemblBacteria" id="CTQ67552">
        <property type="protein sequence ID" value="CTQ67552"/>
        <property type="gene ID" value="LAX5112_01429"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006749">
        <property type="term" value="P:glutathione metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010987">
        <property type="entry name" value="Glutathione-S-Trfase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036282">
        <property type="entry name" value="Glutathione-S-Trfase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040079">
        <property type="entry name" value="Glutathione_S-Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004045">
        <property type="entry name" value="Glutathione_S-Trfase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004046">
        <property type="entry name" value="GST_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00043">
        <property type="entry name" value="GST_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13417">
        <property type="entry name" value="GST_N_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00019">
        <property type="entry name" value="Glutathione_Transferase_(cytos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47616">
        <property type="entry name" value="SSF47616"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50405">
        <property type="entry name" value="GST_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50404">
        <property type="entry name" value="GST_NTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GST N-terminal" evidence="1">
        <location>
            <begin position="1"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="domain" description="GST C-terminal" evidence="2">
        <location>
            <begin position="85"/>
            <end position="206"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50404"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50405"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ67552.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="209" mass="23809" checksum="546CE437747371ED" modified="2015-12-09" version="1">MIDLYTWTTPNGRKVSILLEELGVDYTPHAIDITNGDQMAPEFLEISPNNKIPAIVDRETGLKLMESGAIMIYLAEKYGKFLAPSGEQRARTLEWLMWQMGGFGPMLGQAHHFVHFNPDKSDYAKERYSTEARRLYGVLDKQLQERDFIAGDYSIADMACWPWASRYEWQGVSLSDFPNVQAWYQRIAARPAVQRGYQVPKDMGPIPAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZR5</accession>
    <name>A0A0M6ZZR5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcriptional regulator, Acidobacterial, PadR-family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01193</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67053.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01193"/>
    <dbReference type="EnsemblBacteria" id="CTQ67053">
        <property type="protein sequence ID" value="CTQ67053"/>
        <property type="gene ID" value="LAX5112_01193"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005149">
        <property type="entry name" value="Tscrpt_reg_PadR_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03551">
        <property type="entry name" value="PadR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PadR" evidence="1">
        <location>
            <begin position="1"/>
            <end position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03551"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67053.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="91" mass="10217" checksum="368E9F7329EEE1F7" modified="2015-12-09" version="1">MLAMLSRRESYAYEISSTLADAVGMGESTIYPLMRRMAKDGFVASRLVETSSGPSRKYYTLTKAGWQRLEEQKSDWRVFIAAVNGILGESQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A023</accession>
    <name>A0A0M7A023_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01242</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67163.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671078.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67163">
        <property type="protein sequence ID" value="CTQ67163"/>
        <property type="gene ID" value="LAX5112_01242"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="21"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="48"/>
            <end position="69"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67163.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="191" mass="20981" checksum="720807C4263D2D39" modified="2015-12-09" version="1">MYETVISKLGEIIKISPRLGFTLSASCGLIIYLGSTGTVPGIEGFLLTALWLLMALFAAVAASGVLAALQEFSSYIAAWFAKRKHIADLQKQFADDIPRLTDRERMIFGYLLHHNQDTFTAAADAGHATTLVAKGYIYSIGVHGQSVSAARVPFKVRPEVWNLLQDRKEEFPHTARNGRGGDSPPWVVRYA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A037</accession>
    <name>A0A0M7A037_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Nicotinate dehydrogenase subunit B</fullName>
            <ecNumber evidence="6">1.17.2.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">nicB</name>
        <name evidence="6" type="ORF">LAX5112_01538</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.17.2.1" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67836.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671337.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01538"/>
    <dbReference type="EnsemblBacteria" id="CTQ67836">
        <property type="protein sequence ID" value="CTQ67836"/>
        <property type="gene ID" value="LAX5112_01538"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.760.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009056">
        <property type="entry name" value="Cyt_c-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036909">
        <property type="entry name" value="Cyt_c-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00034">
        <property type="entry name" value="Cytochrom_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46626">
        <property type="entry name" value="SSF46626"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51007">
        <property type="entry name" value="CYTC"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 4" id="KW-0349">Heme</keyword>
    <keyword evidence="3 4" id="KW-0408">Iron</keyword>
    <keyword evidence="2 4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cytochrome c" evidence="5">
        <location>
            <begin position="39"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="domain" description="Cytochrome c" evidence="5">
        <location>
            <begin position="183"/>
            <end position="303"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00433"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ67836.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="310" mass="32515" checksum="DCD2C98FB48B29DB" modified="2015-12-09" version="1">MKKLLLFVIVLGVAAALAGWFLSAPTRLDGNTIANLGPGDPANGELVFWASGCSSCHAAPEAKGDDKLKLGGGLRLETPFGVFVAPNVSQDPNDGIGNWSIADLANAMTHGTSPDGRNYYPAFPYASYVRMDLADINDLFSFMKTLPAVGGDAGPNELAFPFNIRRGVGLWKRMFLDPAPVVAAAVSGEDVDPAIWERGRYLVEGPGHCGECHTPRDLAGGLILSDWLGGASAATGEGRVPNITPVPGGFGSWSASDIAYYLESGFTPDYDSVGGEMVPVQENMARLPASDREAIGVYLKAIPAVSDAAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0P5</accession>
    <name>A0A0M7A0P5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Mannosylfructose-phosphate synthase</fullName>
            <ecNumber evidence="3">2.4.1.246</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">mfpsA_1</name>
        <name evidence="3" type="ORF">LAX5112_01368</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.4.1.246" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67393.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451744.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01368"/>
    <dbReference type="EnsemblBacteria" id="CTQ67393">
        <property type="protein sequence ID" value="CTQ67393"/>
        <property type="gene ID" value="LAX5112_01368"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0103011">
        <property type="term" value="F:mannosylfructose-phosphate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001296">
        <property type="entry name" value="Glyco_trans_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028098">
        <property type="entry name" value="Glyco_trans_4-like_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13439">
        <property type="entry name" value="Glyco_transf_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00534">
        <property type="entry name" value="Glycos_transf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glyco_trans_4-like_N" evidence="2">
        <location>
            <begin position="30"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="domain" description="Glycos_transf_1" evidence="1">
        <location>
            <begin position="229"/>
            <end position="376"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00534"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13439"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ67393.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="432" mass="48919" checksum="8C11E66B7EC82EA8" modified="2015-12-09" version="1">MNKQNIGSLLMISLHGYVAGTPELGKPDTGGQVVFVLELAKRFARLGYRVDVMTRQFEDQPAEDIINDNLRVVRIPFGGKDFIRKEDMHDWYGDFVTNALAMIRHRGLQYDVINSHYWDAGVSGQKIAEELQIPHIHTPHSLGWWKQHDMEGADAAEMAGYRFDERIQKEFVLYRNCDHVIATTEQQVDLIAEHYQLPKDHISMIPPGIDEARFTPATPSRVASVRQKHDLRETDIYVVGRAAENKGYDLIIEALPSLLKMQPEARLVLAAGANSDSDNALLGQWKQRASELGVSDKISWRGYVADEDLADFYRAPGIFALPSRYEPFGMTAVEAMACGTPTVVTIHGGLFEQLEFGRHALVADPKRPEEFAAMLNMPMQYPWVRETLSVEGARFARRVFGWTGIARRTLQVFDHFKGRYDDLQTDELTLAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0Z7</accession>
    <name>A0A0M7A0Z7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">ATP-dependent Clp protease adapter protein ClpS</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">clpS_1</name>
        <name evidence="1" type="synonym">clpS</name>
        <name evidence="4" type="ORF">LAX5112_01833</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation.</text>
    </comment>
    <comment type="subunit">
        <text evidence="1">Binds to the N-terminal domain of the chaperone ClpA.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the ClpS family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68665.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01833"/>
    <dbReference type="EnsemblBacteria" id="CTQ68665">
        <property type="protein sequence ID" value="CTQ68665"/>
        <property type="gene ID" value="LAX5112_01833"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008233">
        <property type="term" value="F:peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030163">
        <property type="term" value="P:protein catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1390.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00302">
        <property type="entry name" value="ClpS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022935">
        <property type="entry name" value="ClpS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003769">
        <property type="entry name" value="ClpS_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014719">
        <property type="entry name" value="Ribosomal_L7/12_C/ClpS-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33473">
        <property type="entry name" value="PTHR33473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02617">
        <property type="entry name" value="ClpS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54736">
        <property type="entry name" value="SSF54736"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0645">Protease</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ClpS" evidence="3">
        <location>
            <begin position="49"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="10"/>
            <end position="24"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00302"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF02617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ68665.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="132" mass="14907" checksum="B9A3F022290169F7" modified="2015-12-09" version="1">MLSGPIGNETVRAGVTQTSVTEMTAGPDYDKDGGDAGTVVVTRTKTVTKRPNLYRVLLLNDDYTPMEFVIHVVESFFQKNREEATRIMLHVHHHGVGECGIYTYEVAETKVTQVMDFARRHQHPLQCVMEKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A150</accession>
    <name>A0A0M7A150_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Aminomethyltransferase</fullName>
            <ecNumber evidence="6">2.1.2.10</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">gcvT_7</name>
        <name evidence="6" type="ORF">LAX5112_01697</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the GcvT family.</text>
    </comment>
    <dbReference type="EC" id="2.1.2.10" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68331.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671470.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01697"/>
    <dbReference type="EnsemblBacteria" id="CTQ68331">
        <property type="protein sequence ID" value="CTQ68331"/>
        <property type="gene ID" value="LAX5112_01697"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004047">
        <property type="term" value="F:aminomethyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008115">
        <property type="term" value="F:sarcosine oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046653">
        <property type="term" value="P:tetrahydrofolate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.440">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1360.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042204">
        <property type="entry name" value="2Fe-2S-bd_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028896">
        <property type="entry name" value="GCST/YgfZ/DmdA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013977">
        <property type="entry name" value="GCV_T_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006222">
        <property type="entry name" value="GCV_T_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029043">
        <property type="entry name" value="GcvT/YgfZ_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006277">
        <property type="entry name" value="Sarcosine_oxidase_asu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041117">
        <property type="entry name" value="SoxA_A3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027266">
        <property type="entry name" value="TrmE/GcvT_dom1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43757">
        <property type="entry name" value="PTHR43757"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01571">
        <property type="entry name" value="GCV_T"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08669">
        <property type="entry name" value="GCV_T_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17806">
        <property type="entry name" value="SO_alpha_A3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101790">
        <property type="entry name" value="SSF101790"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01372">
        <property type="entry name" value="soxA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="SO_alpha_A3" evidence="5">
        <location>
            <begin position="500"/>
            <end position="583"/>
        </location>
    </feature>
    <feature type="domain" description="GCV_T" evidence="3">
        <location>
            <begin position="598"/>
            <end position="863"/>
        </location>
    </feature>
    <feature type="domain" description="GCV_T_C" evidence="4">
        <location>
            <begin position="890"/>
            <end position="975"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008609"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01571"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF08669"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF17806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ68331.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="983" mass="105851" checksum="D637ACB9FDDCC4AF" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2D6</accession>
    <name>A0A0M7A2D6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Putative L,D-transpeptidase YbiS</fullName>
            <ecNumber evidence="6">2.-.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">ybiS_3</name>
        <name evidence="6" type="ORF">LAX5112_01968</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Cell wall biogenesis; peptidoglycan biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the YkuD family.</text>
    </comment>
    <dbReference type="EC" id="2.-.-.-" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ69009.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008190704.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01968"/>
    <dbReference type="EnsemblBacteria" id="CTQ69009">
        <property type="protein sequence ID" value="CTQ69009"/>
        <property type="gene ID" value="LAX5112_01968"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00219"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071972">
        <property type="term" value="F:peptidoglycan L,D-transpeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd16913">
        <property type="entry name" value="YkuD_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.440.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005490">
        <property type="entry name" value="LD_TPept_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038063">
        <property type="entry name" value="Transpep_catalytic_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03734">
        <property type="entry name" value="YkuD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141523">
        <property type="entry name" value="SSF141523"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <keyword evidence="3 6" id="KW-0808">Transferase</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809189" evidence="4">
        <location>
            <begin position="25"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="domain" description="YkuD" evidence="5">
        <location>
            <begin position="64"/>
            <end position="195"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004752"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF03734"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ69009.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="197" mass="21957" checksum="4D3044E079BDB8EC" modified="2015-12-09" version="1">MKKLFYLVLALAISAIMFETPASAQGTYFDPVSKRWLTMKYHPGGPSPIKRKRVRYDGPYSPGTIVIDTSERRLYHVLGNGRAMKYGVGVGKDGFQWAGTHRVTRKAEWPSWTPPAQMRARERAKGRILPAHMKGGPNNPMGARALYIGNTLYRIHGTTEPWTIGSAVSSGCIRMANEDVIHLYKSVDVGAKIIVKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2K4</accession>
    <name>A0A0M7A2K4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01892</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68801.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671588.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ68801">
        <property type="protein sequence ID" value="CTQ68801"/>
        <property type="gene ID" value="LAX5112_01892"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032710">
        <property type="entry name" value="NTF2-like_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54427">
        <property type="entry name" value="SSF54427"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ68801.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="135" mass="15248" checksum="135A231D4BFD8552" modified="2015-12-09" version="1">MAQYSDHLSLWLSGLEGADKYKVLNQVLADDCVFYSPVMHTPQKGKQLTFLYLASAFTVLLKEGKFRYCRILEQGHDAVLEFETEIDGIHINGVDMMTFNKAGQITEFKVMLRPLNALEKVRALMMAELEAAKSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2R6</accession>
    <name>A0A0M7A2R6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Glutathione synthetase</fullName>
            <ecNumber evidence="10">6.3.2.3</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10">GSH synthetase</fullName>
            <shortName evidence="10">GSH-S</shortName>
            <shortName evidence="10">GSHase</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="10">Glutathione synthase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="10 13" type="primary">gshB</name>
        <name evidence="13" type="ORF">LAX5112_02084</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + glutathione + H(+) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:13557"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57305"/>
            <dbReference type="ChEBI" id="CHEBI:57925"/>
            <dbReference type="ChEBI" id="CHEBI:58173"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.2.3"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="10">Sulfur metabolism; glutathione biosynthesis; glutathione from L-cysteine and L-glutamate: step 2/2.</text>
    </comment>
    <comment type="similarity">
        <text evidence="10">Belongs to the prokaryotic GSH synthase family.</text>
    </comment>
    <dbReference type="EC" id="6.3.2.3" evidence="10"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69358.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008190200.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02084"/>
    <dbReference type="EnsemblBacteria" id="CTQ69358">
        <property type="protein sequence ID" value="CTQ69358"/>
        <property type="gene ID" value="LAX5112_02084"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00142">
        <property type="reaction ID" value="UER00210"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004363">
        <property type="term" value="F:glutathione synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1490.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00162">
        <property type="entry name" value="GSH_S"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011761">
        <property type="entry name" value="ATP-grasp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013815">
        <property type="entry name" value="ATP_grasp_subdomain_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006284">
        <property type="entry name" value="Glut_synth_pro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004218">
        <property type="entry name" value="GSHS_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004215">
        <property type="entry name" value="GSHS_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016185">
        <property type="entry name" value="PreATP-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21621:SF4">
        <property type="entry name" value="PTHR21621:SF4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02955">
        <property type="entry name" value="GSH-S_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02951">
        <property type="entry name" value="GSH-S_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52440">
        <property type="entry name" value="SSF52440"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01380">
        <property type="entry name" value="glut_syn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50975">
        <property type="entry name" value="ATP_GRASP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 10 11" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 10" id="KW-0317">Glutathione biosynthesis</keyword>
    <keyword evidence="3 10 13" id="KW-0436">Ligase</keyword>
    <keyword evidence="8" id="KW-0460">Magnesium</keyword>
    <keyword evidence="9" id="KW-0464">Manganese</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6 10 11" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ATP-grasp" evidence="12">
        <location>
            <begin position="125"/>
            <end position="309"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022684"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00162"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00409"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="CTQ69358.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="314" mass="35104" checksum="34A57C0009C31A73" modified="2015-12-09" version="1">MPIKVAVQMDHIESINIAGDSAFAMMLEAQKRGHELYHYTPDRLALRGDEVFCALEPVTVRDEKGNHFTLGERTRTDMREIDVVLMRQDPPFDLSYIAATHILDKIHPDTLVVNDPTEVRNAPEKLFVTEFPDLMPPTLITKDRAEIDLFREEYGDIVMKPLFGHGGAAVFRITKDDLNYGSLYDFFAATFREPWVIQQFLPNVKHGDKRILLVNGEFAGAVNRVPAAGDLRSNMVRGGAPTDSDLTEREREICARLGPSLREKGLILVGIDVIDGMLTEINVTAPTGIRAIQNLGGPDVAAKVWDVLEQKIKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A363</accession>
    <name>A0A0M7A363_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02138</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69505.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671794.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ69505">
        <property type="protein sequence ID" value="CTQ69505"/>
        <property type="gene ID" value="LAX5112_02138"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.580.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036977">
        <property type="entry name" value="DNA_primase_Znf_CHC2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ69505.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="104" mass="11651" checksum="2BE3429F7AFEC2DA" modified="2015-12-09" version="1">MPVGPSINFARIARTALMHSDSLCRRWLPEGYQDGKEWIARNPRRTDRRPGSFKVNLSTGRWGDFATGDKGGDLVALAAFLFDLPQKDAALRIAEMLRVSPYDS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3X9</accession>
    <name>A0A0M7A3X9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01974</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ69020.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671650.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ69020">
        <property type="protein sequence ID" value="CTQ69020"/>
        <property type="gene ID" value="LAX5112_01974"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809078" evidence="2">
        <location>
            <begin position="20"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="37"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="79"/>
            <end position="110"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ69020.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="126" mass="14193" checksum="B0B555FF637B95EE" modified="2015-12-09" version="1">MKKLLLPGLAVFGAMTTQAAAASAEPRWWVPPGESDWYAWVGLVIFFLAILLVVHLYARFDHYAEHRSKNTPLRTTIPMMLTVALAFEIMPALSHFSVLLPAALILTAIARDFMLWWRPEDVEAAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A436</accession>
    <name>A0A0M7A436_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF218 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02192</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69639.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671833.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ69639">
        <property type="protein sequence ID" value="CTQ69639"/>
        <property type="gene ID" value="LAX5112_02192"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd06259">
        <property type="entry name" value="YdcF-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003848">
        <property type="entry name" value="DUF218"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02698">
        <property type="entry name" value="DUF218"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF218" evidence="1">
        <location>
            <begin position="12"/>
            <end position="158"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02698"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69639.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="176" mass="19279" checksum="07D5BAFD90883152" modified="2015-12-09" version="1">MQSRKHPQRPADAIVLLGAAVWTGGRPSPTLLRRIEHAAALYHAGAAPIIVGCGGLGNHPPAEAEVMKRELIALGVPQSAIRTEPRSRNTLENAVFSARILRREKLENTLIVSDRYHLPRAVLCFQTLGFSATGSGPGRSVSNTPLNRWLYACLRETVAYPLYLVKLRAIRKRSGI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5X8</accession>
    <name>A0A0M7A5X8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02196</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69650.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671837.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02196"/>
    <dbReference type="EnsemblBacteria" id="CTQ69650">
        <property type="protein sequence ID" value="CTQ69650"/>
        <property type="gene ID" value="LAX5112_02196"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050355">
        <property type="term" value="F:triphosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.40.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007899">
        <property type="entry name" value="CHAD_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038186">
        <property type="entry name" value="CHAD_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033469">
        <property type="entry name" value="CYTH-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023577">
        <property type="entry name" value="CYTH_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039013">
        <property type="entry name" value="YgiF"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR39569">
        <property type="entry name" value="PTHR39569"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05235">
        <property type="entry name" value="CHAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01928">
        <property type="entry name" value="CYTH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00880">
        <property type="entry name" value="CHAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01118">
        <property type="entry name" value="CYTH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55154">
        <property type="entry name" value="SSF55154"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51708">
        <property type="entry name" value="CHAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51707">
        <property type="entry name" value="CYTH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CYTH" evidence="1">
        <location>
            <begin position="5"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="domain" description="CHAD" evidence="2">
        <location>
            <begin position="227"/>
            <end position="521"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51707"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ69650.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="521" mass="57882" checksum="2C92160554B965E1" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5Z0</accession>
    <name>A0A0M7A5Z0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Inner membrane protein YbjJ</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ybjJ</name>
        <name evidence="7" type="ORF">LAX5112_01985</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ69044.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ69044">
        <property type="protein sequence ID" value="CTQ69044"/>
        <property type="gene ID" value="LAX5112_01985"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="21"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="51"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="81"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="104"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="144"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="169"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="202"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="241"/>
            <end position="262"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="274"/>
            <end position="293"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="299"/>
            <end position="319"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="331"/>
            <end position="353"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="359"/>
            <end position="381"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="6">
        <location>
            <begin position="15"/>
            <end position="385"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ69044.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="387" mass="39055" checksum="0007C583A1FA1B20" modified="2015-12-09" version="1">MTGHDSALSLNRFETRLSTRLVFFIGGLTMGAWSPLIPFAQQRLGVDDAGLGLLLLCLGIGSVLFMPLAGPLCAAFGSRRVIVGSGIGLIAGFPALGYAETIPLMAIAVFLFGSFLGVMEVGMNSHAVDVESGSDKPLMSGFHAQFSIGGFAGAGGVTLFLTLGLSPFAAAGLIALLSLLLLIVATPRLLPNRTGGSSTGGAFPKGVVLLLALLIAITFLTEGAVLDWSAALITDQGLVDIAQGGIGFMCFSITMTIGRLLGDRVVARFGPKNILLWGGVITIAGILLVATASNLAVSLIGFAAIGAGVCNIVPVLFSLTGRQKVMPQGAAIAAVATAGYGGILLGPAVIGFVADGIGLPVTFAGLSLLMVIMALSAGVAVQGSQAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A753</accession>
    <name>A0A0M7A753_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Homoserine/homoserine lactone efflux protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">rhtB_4</name>
        <name evidence="6" type="ORF">LAX5112_02649</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70908.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672220.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02649"/>
    <dbReference type="EnsemblBacteria" id="CTQ70908">
        <property type="protein sequence ID" value="CTQ70908"/>
        <property type="gene ID" value="LAX5112_02649"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006865">
        <property type="term" value="P:amino acid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001123">
        <property type="entry name" value="LeuE-type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30086">
        <property type="entry name" value="PTHR30086"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01810">
        <property type="entry name" value="LysE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006324">
        <property type="entry name" value="LeuE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="6"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="40"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="70"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="113"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="155"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="186"/>
            <end position="205"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ70908.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="207" mass="22022" checksum="48EC8B9D6428BF22" modified="2015-12-09" version="1">MPFELWLMFVAVSLLPAISPGPAVMLAISNTLRFGRNATLASATGNMMGLIVIGYAVAFGFGALMAASAVAFTVLKIIGAVYLIFLGIKILRDGSSFQVQDSALTPRKSPLKLFLEAFFVSVTNPKAILVITALFPQFMSKGGINLAEITILSVTYAVLCFANHAAIAFAGGHMRQFLTSARRVRWVRRITGGLFVGFGAALATASR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A794</accession>
    <name>A0A0M7A794_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Gamma-glutamylputrescine oxidoreductase</fullName>
            <ecNumber evidence="2">1.4.3.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">puuB_2</name>
        <name evidence="2" type="ORF">LAX5112_02524</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.4.3.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70481.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672097.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02524"/>
    <dbReference type="EnsemblBacteria" id="CTQ70481">
        <property type="protein sequence ID" value="CTQ70481"/>
        <property type="gene ID" value="LAX5112_02524"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006076">
        <property type="entry name" value="FAD-dep_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01266">
        <property type="entry name" value="DAO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DAO" evidence="1">
        <location>
            <begin position="42"/>
            <end position="395"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01266"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70481.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="441" mass="48165" checksum="C3C6CC507DDE3EE0" modified="2015-12-09" version="1">MLNSLDLLTANDTPGQHPPSYYAATARWQTTYAPLDGPRAADVVIVGAGYTGLSAALHLAERGLDVVLLEANRVGWGASGRNGGQVGSGQRVEQDVLENRHGKSHAKLLWDLAEDSKALVKDLIARHEIACDYTPGILHVDHRKSYVEESRDHVEHLRLTYGYDQIRFVDGDEIGDMVGSPKYFGGSLDMGAGHLHPLNYALGLARAADKAGAKIFEETRVTGIEEQASGGVQVTTDTGTVKARYLILACNGYLGKLNRETAAHVMPINNFIVATKPFSEDEARALIRDNVAVADSKFVINYFRLSADRRLLFGGGENYGYRFPEDIKSFVRRPMTEIYPQLADVEIDFGWGGTLAITPKRMPYFARVKPNILTATGYSGHGVAMATLGGQLLAEAIAGTAGRFDVFERLNIPAFPGGDKLRFPLLVLAMTWFSLRDRLGI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7E6</accession>
    <name>A0A0M7A7E6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02485</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70372.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02485"/>
    <dbReference type="EnsemblBacteria" id="CTQ70372">
        <property type="protein sequence ID" value="CTQ70372"/>
        <property type="gene ID" value="LAX5112_02485"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021445">
        <property type="entry name" value="DUF3095"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11294">
        <property type="entry name" value="DUF3095"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ70372.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="397" mass="43223" checksum="3D0D341128B5A629" modified="2015-12-09" version="1">MSAEDFYSELPSCQDFKSDNIHNDFIPVPEDWVVLTADIVRSRDAINAGRYKDVNMVGAAVIAAVLNQVDRDRVPFVFGGDGAVVVVPEADRKLAEEAIAGVVALARVVLDLELRAAAIPVADIRKKGGDIKVRKYRLSPGNHLAMIIGDGLLIADRILKDPEAVKPYALAASSSDPVLSGLSCRWEPLDAQNGHIVSLILKPATDESLPEIIEGLAGKLGFNPLTDDERLRLAEGPRLKFRFPPRTLSLEASFSSPASWLKGYLMGVVESLFFMYGYYTGRRAGPFDPNKYMKELSLNTDHRKLGDSLQLVLDLTADQLTALQTYLEKLSDAGQLVYGLHVSDRALMTCFMQDVSNNQHIHFVDGADGGLSLAAIDFKKRLAERAAAPETSSSPAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7H0</accession>
    <name>A0A0M7A7H0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">SAP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02396</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70180.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672013.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70180">
        <property type="protein sequence ID" value="CTQ70180"/>
        <property type="gene ID" value="LAX5112_02396"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003034">
        <property type="entry name" value="SAP_dom"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50800">
        <property type="entry name" value="SAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SAP" evidence="1">
        <location>
            <begin position="13"/>
            <end position="47"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50800"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70180.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="198" mass="22981" checksum="8CA50147C7C968AB" modified="2015-12-09" version="1">MTETDLDLIEGSIYFLKIPELKQLLTDAGIKPTGSKQTMINSLIAYVKGDSTRPSAPQFTDGERALRQKANQYDPTVFIVPGVYTNNRKSRELFLTLIGRHFSFTTYGMDWIKDRWAEGTCPTYQAFAEFWQEEYLRRKNNGAFKSKQTLQRVQFFRAMKDRNLSKGELEDAWAREREHHATRAIASIRMIIENRSKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8E2</accession>
    <name>A0A0M7A8E2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Magnesium transport protein CorA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">corA</name>
        <name evidence="7" type="ORF">LAX5112_02531</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70500.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672104.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02531"/>
    <dbReference type="EnsemblBacteria" id="CTQ70500">
        <property type="protein sequence ID" value="CTQ70500"/>
        <property type="gene ID" value="LAX5112_02531"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046873">
        <property type="term" value="F:metal ion transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045861">
        <property type="entry name" value="CorA_cytoplasmic_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045863">
        <property type="entry name" value="CorA_TM1_TM2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002523">
        <property type="entry name" value="MgTranspt_CorA/ZnTranspt_ZntB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01544">
        <property type="entry name" value="CorA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF143865">
        <property type="entry name" value="SSF143865"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF144083">
        <property type="entry name" value="SSF144083"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="266"/>
            <end position="286"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="298"/>
            <end position="318"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009765"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ70500.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="324" mass="36138" checksum="BBC354A7D0BA646A" modified="2015-12-09" version="1">MIIAYCPSVNGLERIELTDDAPLPSTSVWIDLISPTQEERTKAERLMGAEIPNRDEITSIETSERFYLEPGAVVMTAQMPAVSHTLDPVRSSVTFVLNAKRLVTVRYGEPKSLTLLTRKVQSDATIAHLGPAIMFALLDIIVDRCADEMETASACYDDLALKVFGDGLNTRKTASYKDAIRELGRIGLRVAKMHDVCAGLARMVLYISTHAKRFNLSDDQVTDCKMYGRDIHSIKEYGDALDNKLTFLLDATVGLVSMEQNQIAKIFTVLGLIFLPPTLIASIYGMNFVNMPELQWQMGFIFAIGLMVISVGVTFFLFRWLRLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAH9</accession>
    <name>A0A0M7AAH9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Membrane-bound lytic murein transglycosylase C</fullName>
            <ecNumber evidence="4">4.2.2.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">mltC</name>
        <name evidence="4" type="ORF">LAX5112_02592</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the virb1 family.</text>
    </comment>
    <dbReference type="EC" id="4.2.2.-" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70733.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02592"/>
    <dbReference type="EnsemblBacteria" id="CTQ70733">
        <property type="protein sequence ID" value="CTQ70733"/>
        <property type="gene ID" value="LAX5112_02592"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023346">
        <property type="entry name" value="Lysozyme-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008258">
        <property type="entry name" value="Transglycosylase_SLT_dom_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01464">
        <property type="entry name" value="SLT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53955">
        <property type="entry name" value="SSF53955"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0456">Lyase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809192" evidence="2">
        <location>
            <begin position="28"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="domain" description="SLT" evidence="3">
        <location>
            <begin position="66"/>
            <end position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009387"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ70733.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="183" mass="19722" checksum="B1DC76A789CB16A1" modified="2015-12-09" version="1">MLRSIKIATGALCVFAQTLMIPAQAIAADPRTVLNEYGGNRSVASLSSGAKATKTGSPRKDKYASLIRKAAKKHGVPIKIAKAVVEVESNFNSRARGAAGEVGLMQIKPATARGMGYRGSTKALYHPETNLEWGMKYLAGAHDRANGDLCGTILRYNAGHYAKRMNPISRRYCKKVQRILASS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAI8</accession>
    <name>A0A0M7AAI8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Oligopeptide-binding protein AppA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">appA</name>
        <name evidence="5" type="ORF">LAX5112_02818</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the bacterial solute-binding protein 5 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71426.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672353.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02818"/>
    <dbReference type="EnsemblBacteria" id="CTQ71426">
        <property type="protein sequence ID" value="CTQ71426"/>
        <property type="gene ID" value="LAX5112_02818"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030288">
        <property type="term" value="C:outer membrane-bounded periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030678">
        <property type="entry name" value="Peptide/Ni-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039424">
        <property type="entry name" value="SBP_5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000914">
        <property type="entry name" value="SBP_5_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006311">
        <property type="entry name" value="TAT_signal"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019546">
        <property type="entry name" value="TAT_signal_bac_arc"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30290">
        <property type="entry name" value="PTHR30290"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00496">
        <property type="entry name" value="SBP_bac_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002741">
        <property type="entry name" value="MppA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01409">
        <property type="entry name" value="TAT_signal_seq"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0574">Periplasm</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SBP_bac_5" evidence="4">
        <location>
            <begin position="124"/>
            <end position="526"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ71426.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="630" mass="71439" checksum="1FAE7D4184105E11" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAS3</accession>
    <name>A0A0M7AAS3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 5">Cell division protein FtsZ</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4 9" type="primary">ftsZ</name>
        <name evidence="9" type="ORF">LAX5112_02621</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4 5">Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Homodimer. Polymerizes to form a dynamic ring structure in a strictly GTP-dependent manner. Interacts directly with several other division proteins.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cytoplasm</location>
        </subcellularLocation>
        <text evidence="4">Assembles at midcell at the inner surface of the cytoplasmic membrane.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 4 5">Belongs to the FtsZ family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70823.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02621"/>
    <dbReference type="EnsemblBacteria" id="CTQ70823">
        <property type="protein sequence ID" value="CTQ70823"/>
        <property type="gene ID" value="LAX5112_02621"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032153">
        <property type="term" value="C:cell division site"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000917">
        <property type="term" value="P:division septum assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043093">
        <property type="term" value="P:FtsZ-dependent cytokinesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051258">
        <property type="term" value="P:protein polymerization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd02201">
        <property type="entry name" value="FtsZ_type1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1440">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00909">
        <property type="entry name" value="FtsZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000158">
        <property type="entry name" value="Cell_div_FtsZ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017844">
        <property type="entry name" value="Cell_div_FtsZ_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020805">
        <property type="entry name" value="Cell_div_FtsZ_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045061">
        <property type="entry name" value="FtsZ/CetZ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024757">
        <property type="entry name" value="FtsZ_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008280">
        <property type="entry name" value="Tub_FtsZ_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037103">
        <property type="entry name" value="Tubulin/FtsZ-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018316">
        <property type="entry name" value="Tubulin/FtsZ_2-layer-sand-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036525">
        <property type="entry name" value="Tubulin/FtsZ_GTPase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003008">
        <property type="entry name" value="Tubulin_FtsZ_GTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30314">
        <property type="entry name" value="PTHR30314"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12327">
        <property type="entry name" value="FtsZ_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00091">
        <property type="entry name" value="Tubulin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00423">
        <property type="entry name" value="CELLDVISFTSZ"/>
    </dbReference>
    <dbReference type="SMART" id="SM00864">
        <property type="entry name" value="Tubulin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00865">
        <property type="entry name" value="Tubulin_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52490">
        <property type="entry name" value="SSF52490"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55307">
        <property type="entry name" value="SSF55307"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00065">
        <property type="entry name" value="ftsZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03483">
        <property type="entry name" value="FtsZ_alphas_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01134">
        <property type="entry name" value="FTSZ_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01135">
        <property type="entry name" value="FTSZ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="4 5 9" id="KW-0132">Cell division</keyword>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 4 5" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="2 4 5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0717">Septation</keyword>
    <feature type="domain" description="Tubulin" evidence="7">
        <location>
            <begin position="52"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="domain" description="Tubulin_C" evidence="8">
        <location>
            <begin position="246"/>
            <end position="364"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="501"/>
            <end position="617"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="520"/>
            <end position="559"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="579"/>
            <end position="603"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="60"/>
            <end position="64"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="147"/>
            <end position="149"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="178"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="182"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="226"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009690"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00909"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU000631"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="SMART" id="SM00864"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="SMART" id="SM00865"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ70823.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="617" mass="64661" checksum="2AAF43AD40A0118A" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="34" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAV0</accession>
    <name>A0A0M7AAV0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="9 10">tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase</fullName>
            <ecNumber evidence="9 10">2.8.4.3</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10">(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="10">tRNA-i(6)A37 methylthiotransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="10 15" type="primary">miaB</name>
        <name evidence="15" type="ORF">LAX5112_02791</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 10">Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>[sulfur carrier]-SH + AH2 + N(6)-dimethylallyladenosine(37) in tRNA + 2 S-adenosyl-L-methionine = 2-methylsulfanyl-N(6)-dimethylallyladenosine(37) in tRNA + 5'-deoxyadenosine + [sulfur carrier]-H + A + 2 H(+) + L-methionine + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:37067"/>
            <dbReference type="Rhea" id="RHEA-COMP:10375"/>
            <dbReference type="Rhea" id="RHEA-COMP:10376"/>
            <dbReference type="Rhea" id="RHEA-COMP:14737"/>
            <dbReference type="Rhea" id="RHEA-COMP:14739"/>
            <dbReference type="ChEBI" id="CHEBI:13193"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17319"/>
            <dbReference type="ChEBI" id="CHEBI:17499"/>
            <dbReference type="ChEBI" id="CHEBI:29917"/>
            <dbReference type="ChEBI" id="CHEBI:57844"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:64428"/>
            <dbReference type="ChEBI" id="CHEBI:74415"/>
            <dbReference type="ChEBI" id="CHEBI:74417"/>
            <dbReference type="EC" id="2.8.4.3"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="10">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
        <text evidence="10">Binds 2 [4Fe-4S] clusters. One cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.</text>
    </comment>
    <comment type="subunit">
        <text evidence="10">Monomer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="10">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="10">Belongs to the methylthiotransferase family. MiaB subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.8.4.3" evidence="9 10"/>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71350.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672339.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02791"/>
    <dbReference type="EnsemblBacteria" id="CTQ71350">
        <property type="protein sequence ID" value="CTQ71350"/>
        <property type="gene ID" value="LAX5112_02791"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035596">
        <property type="term" value="F:methylthiotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006400">
        <property type="term" value="P:tRNA modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12160">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.30.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01864">
        <property type="entry name" value="tRNA_metthiotr_MiaB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006638">
        <property type="entry name" value="Elp3/MiaB/NifB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005839">
        <property type="entry name" value="Methylthiotransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020612">
        <property type="entry name" value="Methylthiotransferase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013848">
        <property type="entry name" value="Methylthiotransferase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038135">
        <property type="entry name" value="Methylthiotransferase_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006463">
        <property type="entry name" value="MiaB_methiolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007197">
        <property type="entry name" value="rSAM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023404">
        <property type="entry name" value="rSAM_horseshoe"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002792">
        <property type="entry name" value="TRAM_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04055">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01938">
        <property type="entry name" value="TRAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00919">
        <property type="entry name" value="UPF0004"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDF00273">
        <property type="entry name" value="(dimethylallyl)adenosine_tRNA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDG01061">
        <property type="entry name" value="methylthiotransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00729">
        <property type="entry name" value="Elp3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00089">
        <property type="entry name" value="TIGR00089"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51449">
        <property type="entry name" value="MTTASE_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01278">
        <property type="entry name" value="MTTASE_RADICAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51918">
        <property type="entry name" value="RADICAL_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50926">
        <property type="entry name" value="TRAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 10" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="10" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7 10" id="KW-0408">Iron</keyword>
    <keyword evidence="8 10" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="6 10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 10" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="3 10 15" id="KW-0808">Transferase</keyword>
    <keyword evidence="5 10" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="MTTase N-terminal" evidence="13">
        <location>
            <begin position="26"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="domain" description="Radical SAM core" evidence="14">
        <location>
            <begin position="173"/>
            <end position="405"/>
        </location>
    </feature>
    <feature type="domain" description="TRAM" evidence="12">
        <location>
            <begin position="408"/>
            <end position="470"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="35"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="71"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="109"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="187"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>2</label>
            <note>4Fe-4S-S-AdoMet</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="191"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>2</label>
            <note>4Fe-4S-S-AdoMet</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="194"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>2</label>
            <note>4Fe-4S-S-AdoMet</note>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003234"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00033765"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01864"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50926"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS51449"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS51918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="CTQ71350.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="486" mass="53524" checksum="307BE872471C3E6A" modified="2015-12-09" version="1">MTSRPEAELDTSAAAETKTASGDNTRKVFVRTYGCQMNVYDSERMTDVLAPQGYSTTADMEEADLVILNTCHIREKAAEKVYSELGRIRKVKEERAKAGKDMMVGVAGCVAQAEGEEISRRAPIVDMVVGPQSYHQLPSLLDKARQGQKVVETEFDIDAKFDHLSARAEKPIMKRPPAAFLTVQEGCDKFCTFCVVPYTRGAEVSRSVEQIVTEAQRMAASGVREVTLLGQNVNAYHGEAADGSTWGLGKLLRRLSEIDGLDRLRYTTSHPRDMDDDLIEAHRELTSLMPYLHLPVQSGSDKILKAMNRKHTRDEYFRLIDRIREAAPDIALSGDFIVGFPGETDQDFEDTMDLIRRVEYGSAFSFKYSQRPGTPGATMEDQVPEDVKSVRLQELQALLSEQQKAFNASRKGMTCDVLLEKKGRNPGQLVGKSPWLQPVQLDAPESMIGSVQAVEIVEIGSNSLFGRLIAGQDAADGSGAIPAPAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AB02</accession>
    <name>A0A0M7AB02_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative O-linked N-acetylglucosamine transferase, SPINDLY family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03131</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72298.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672601.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03131"/>
    <dbReference type="EnsemblBacteria" id="CTQ72298">
        <property type="protein sequence ID" value="CTQ72298"/>
        <property type="gene ID" value="LAX5112_03131"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_repeat"/>
    </dbReference>
    <dbReference type="SMART" id="SM00028">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="SSF48452"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809206" evidence="1">
        <location>
            <begin position="20"/>
            <end position="220"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72298.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="220" mass="24062" checksum="A1D24FEFF62E0268" modified="2015-12-09" version="1">MRIFVFATFLFLSPVVGLAQPVPDLGPETDTPSVDDFDALPDAEPDEGGQVVVEETDPGETLSKLDGLYEDLAGAEDPAARQRVARGIRRIWMDSGSDTVDLLMARAGRAIQAEDHGLALDLLDVVVVLEPSFAEGWNRRATVHYMKEDFGKSLVDIERTLALEPRHWGALSGLAIIQRRLGFDEQALSTFRRALEIHPGLENASEAVESLEKDAEGEPV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABN0</accession>
    <name>A0A0M7ABN0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">ATP-dependent RNA helicase DbpA</fullName>
            <ecNumber evidence="7">3.6.4.13</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">dbpA</name>
        <name evidence="7" type="ORF">LAX5112_03028</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="3">Belongs to the DEAD box helicase family.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.13" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72057.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03028"/>
    <dbReference type="EnsemblBacteria" id="CTQ72057">
        <property type="protein sequence ID" value="CTQ72057"/>
        <property type="gene ID" value="LAX5112_03028"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003724">
        <property type="term" value="F:RNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005580">
        <property type="entry name" value="DbpA/CsdA_RNA-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000629">
        <property type="entry name" value="RNA-helicase_DEAD-box_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03880">
        <property type="entry name" value="DbpA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00039">
        <property type="entry name" value="DEAD_ATP_HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 3 7" id="KW-0347">Helicase</keyword>
    <keyword evidence="1 3 7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="5">
        <location>
            <begin position="54"/>
            <end position="230"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase C-terminal" evidence="6">
        <location>
            <begin position="253"/>
            <end position="409"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="561"/>
            <end position="722"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="578"/>
            <end position="692"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="4">
        <location>
            <begin position="695"/>
            <end position="714"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU000492"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ72057.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="722" mass="79011" checksum="B0733637B85ADCB8" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABX1</accession>
    <name>A0A0M7ABX1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02749</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71233.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672417.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ71233">
        <property type="protein sequence ID" value="CTQ71233"/>
        <property type="gene ID" value="LAX5112_02749"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ71233.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="78" mass="8863" checksum="79B05ABE467D8F5D" modified="2015-12-09" version="1">MPDIEDVVNELKQTRDEVKLKIHLGSKELQEEWDGLEKKWDAFEAEARLGESAQNISEATSLLGDELSKAFKKFKSAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AC51</accession>
    <name>A0A0M7AC51_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Ureidoglycolate hydrolase</fullName>
            <ecNumber evidence="5">3.5.1.116</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">allA</name>
        <name evidence="5" type="ORF">LAX5112_02926</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>(S)-ureidoglycolate = glyoxylate + urea</text>
            <dbReference type="Rhea" id="RHEA:11304"/>
            <dbReference type="ChEBI" id="CHEBI:16199"/>
            <dbReference type="ChEBI" id="CHEBI:36655"/>
            <dbReference type="ChEBI" id="CHEBI:57296"/>
            <dbReference type="EC" id="4.3.2.3"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="2">Homodimer.</text>
    </comment>
    <dbReference type="EC" id="3.5.1.116" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71780.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672445.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02926"/>
    <dbReference type="EnsemblBacteria" id="CTQ71780">
        <property type="protein sequence ID" value="CTQ71780"/>
        <property type="gene ID" value="LAX5112_02926"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004848">
        <property type="term" value="F:ureidoglycolate hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050385">
        <property type="term" value="F:ureidoglycolate lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000256">
        <property type="term" value="P:allantoin catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006144">
        <property type="term" value="P:purine nucleobase metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.480">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007247">
        <property type="entry name" value="Ureidogly_lyase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024060">
        <property type="entry name" value="Ureidoglycolate_lyase_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21221">
        <property type="entry name" value="PTHR21221"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04115">
        <property type="entry name" value="Ureidogly_lyase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF017306">
        <property type="entry name" value="Ureidogly_hydro"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-0659">Purine metabolism</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001281"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022631"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ71780.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="162" mass="17747" checksum="F4B765B517B7F582" modified="2015-12-09" version="1">MTHFLTPAPLTAEAFSTYGDVIEVSGEPDKIINQGMCGRHHDLAKVDFGNGRAGISLFDAKARTFPYTVDMVERHPDGSQAFVPLDGVPMLVIVAEDKDGAPINLKAFVTQPGQSINLHRGTWHGVLAPIEQPGRYIVVDRIGDGANLEEHWFDTPWIIESV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACB0</accession>
    <name>A0A0M7ACB0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Cytochrome-c oxidase</fullName>
            <ecNumber evidence="6">7.1.1.9</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="primary">fixN</name>
        <name evidence="15" type="ORF">LAX5112_03047</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>4 Fe(II)-[cytochrome c] + 8 H(+)(in) + O2 = 4 Fe(III)-[cytochrome c] + 4 H(+)(out) + 2 H2O</text>
            <dbReference type="Rhea" id="RHEA:11436"/>
            <dbReference type="Rhea" id="RHEA-COMP:10350"/>
            <dbReference type="Rhea" id="RHEA-COMP:14399"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:29033"/>
            <dbReference type="ChEBI" id="CHEBI:29034"/>
            <dbReference type="EC" id="7.1.1.9"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="11">
            <name>Cu(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29036"/>
        </cofactor>
        <text evidence="11">Binds 1 copper ion per subunit, denoted as copper B.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>heme b</name>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="11">
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </cofactor>
        <text evidence="11">Binds 2 heme groups per subunit, denoted as high- and low-spin.</text>
    </comment>
    <comment type="pathway">
        <text evidence="4">Energy metabolism; oxidative phosphorylation.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cell membrane</location>
            <topology evidence="3">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5 12">Belongs to the heme-copper respiratory oxidase family.</text>
    </comment>
    <dbReference type="EC" id="7.1.1.9" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72092.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008191015.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03047"/>
    <dbReference type="EnsemblBacteria" id="CTQ72092">
        <property type="protein sequence ID" value="CTQ72092"/>
        <property type="gene ID" value="LAX5112_03047"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00705"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045278">
        <property type="term" value="C:plasma membrane respiratory chain complex IV"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004129">
        <property type="term" value="F:cytochrome-c oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006119">
        <property type="term" value="P:oxidative phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd01661">
        <property type="entry name" value="cbb3_Oxidase_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.210.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023616">
        <property type="entry name" value="Cyt_c_oxase-like_su1_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036927">
        <property type="entry name" value="Cyt_c_oxase-like_su1_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000883">
        <property type="entry name" value="Cyt_C_Oxase_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023615">
        <property type="entry name" value="Cyt_c_Oxase_su1_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004677">
        <property type="entry name" value="Cyt_c_oxidase_cbb3_su1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10422">
        <property type="entry name" value="PTHR10422"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10422:SF29">
        <property type="entry name" value="PTHR10422:SF29"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00115">
        <property type="entry name" value="COX1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81442">
        <property type="entry name" value="SSF81442"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00780">
        <property type="entry name" value="ccoN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50855">
        <property type="entry name" value="COX1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00077">
        <property type="entry name" value="COX1_CUB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="12" id="KW-0249">Electron transport</keyword>
    <keyword evidence="11 12" id="KW-0349">Heme</keyword>
    <keyword evidence="11" id="KW-0408">Iron</keyword>
    <keyword evidence="9 13" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="12" id="KW-0679">Respiratory chain</keyword>
    <keyword evidence="7 12 13" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8 13" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="12" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="14"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="38"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="86"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="131"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="163"/>
            <end position="186"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="198"/>
            <end position="220"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="232"/>
            <end position="256"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="276"/>
            <end position="297"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="309"/>
            <end position="326"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="346"/>
            <end position="366"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="378"/>
            <end position="402"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="422"/>
            <end position="443"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="455"/>
            <end position="485"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="505"/>
            <end position="528"/>
        </location>
    </feature>
    <feature type="domain" description="COX1" evidence="14">
        <location>
            <begin position="1"/>
            <end position="551"/>
        </location>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="279"/>
        </location>
        <ligand>
            <name>Cu cation</name>
            <dbReference type="ChEBI" id="CHEBI:23378"/>
            <label>B</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="329"/>
        </location>
        <ligand>
            <name>Cu cation</name>
            <dbReference type="ChEBI" id="CHEBI:23378"/>
            <label>B</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="330"/>
        </location>
        <ligand>
            <name>Cu cation</name>
            <dbReference type="ChEBI" id="CHEBI:23378"/>
            <label>B</label>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00004673"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00009578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00012949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00029368"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRSR" id="PIRSR604677-50"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU000370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS50855"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="CTQ72092.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="551" mass="61830" checksum="49FA7F251479DE14" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACM5</accession>
    <name>A0A0M7ACM5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Secreted protein hcp</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">hcpA_2</name>
        <name evidence="1" type="ORF">LAX5112_02842</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71493.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008193018.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02842"/>
    <dbReference type="EnsemblBacteria" id="CTQ71493">
        <property type="protein sequence ID" value="CTQ71493"/>
        <property type="gene ID" value="LAX5112_02842"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.110.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036624">
        <property type="entry name" value="Hcp1-lik_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008514">
        <property type="entry name" value="T6SS_Hcp"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05638">
        <property type="entry name" value="T6SS_HCP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141452">
        <property type="entry name" value="SSF141452"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03344">
        <property type="entry name" value="VI_effect_Hcp1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ71493.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="170" mass="18807" checksum="8FC658F9244187B2" modified="2015-12-09" version="1">MANVAYMTISGSTQGEITSDATTADSIGNNWQEGHEGESLVYKFESNAIVPRDPNSGTAIGTRRHQPTTIIKPLDKASPLMWQALATGESLEITINFWRTSTSGVQEHYYTIKYTDAVLVEGKTILPDVFDDANASRGDQEQWSFTYRKAEWTHEKAGTSASDDWRAPVT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AD14</accession>
    <name>A0A0M7AD14_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7 15">NAD(P) transhydrogenase subunit beta</fullName>
            <ecNumber evidence="6 15">7.1.1.1</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="15">Nicotinamide nucleotide transhydrogenase subunit beta</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="18" type="primary">pntB</name>
        <name evidence="18" type="ORF">LAX5112_03147</name>
    </gene>
    <organism evidence="18 19">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="19" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="19">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2 15">The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 15">
            <text>H(+)(in) + NAD(+) + NADPH = H(+)(out) + NADH + NADP(+)</text>
            <dbReference type="Rhea" id="RHEA:47992"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="EC" id="7.1.1.1"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cell inner membrane</location>
            <topology evidence="4">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="3">Membrane</location>
            <topology evidence="3">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5 15">Belongs to the PNT beta subunit family.</text>
    </comment>
    <dbReference type="EC" id="7.1.1.1" evidence="6 15"/>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72342.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672610.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03147"/>
    <dbReference type="EnsemblBacteria" id="CTQ72342">
        <property type="protein sequence ID" value="CTQ72342"/>
        <property type="gene ID" value="LAX5112_03147"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008750">
        <property type="term" value="F:NAD(P)+ transhydrogenase (AB-specific) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050661">
        <property type="term" value="F:NADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029035">
        <property type="entry name" value="DHS-like_NAD/FAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012136">
        <property type="entry name" value="NADH_DH_b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034300">
        <property type="entry name" value="PNTB-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02233">
        <property type="entry name" value="PNTB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000204">
        <property type="entry name" value="PNTB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52467">
        <property type="entry name" value="SSF52467"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 15" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="8 15" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="14 15 16" id="KW-0472">Membrane</keyword>
    <keyword evidence="15" id="KW-0520">NAD</keyword>
    <keyword evidence="11 15" id="KW-0521">NADP</keyword>
    <keyword evidence="18" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="19" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="12 15" id="KW-1278">Translocase</keyword>
    <keyword evidence="10 16" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="13 16" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="6"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="36"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="59"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="89"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="130"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="167"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="191"/>
            <end position="210"/>
        </location>
    </feature>
    <feature type="domain" description="PNTB" evidence="17">
        <location>
            <begin position="8"/>
            <end position="462"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000006"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00003943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00007919"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00012943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00014581"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022519"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="PIRNR" id="PIRNR000204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="Pfam" id="PF02233"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="EMBL" id="CTQ72342.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="464" mass="48200" checksum="09A9D03E5F929F79" modified="2015-12-09" version="1">MSANLTAVLYLISAVLFIMALRGLSSPETSRQGNTYGMVGMAIAVLTTLFATGLTAGSFFLIVIGVGVGGGLGAYIAQRIPMTAMPQLVAAFHSLVGLAAVFVAASALYAPGAFGIGAPGQIYTSAMVEASIGAAIGAITFTGSVIAFLKLDGRMSGKPIMLPMRHAINLALAVGMVVLTIILVGSESMTVFWALVIVAFIFGVLIIIPIGGADMPVVVSMLNSYSGWAAAGIGFTVSNMALIITGALVGSSGAILSYIMCKGMNRSFISVILGGFGGETAAAGGDDGEERPVKQGAADDAAFIMKNASKVIIVPGYGMAVAQAQHSLRELADQLKEEGVEVKYAIHPVAGRMPGHMNVLLAEANVPYDEVFELEDINSEFAQADVVYVIGANDVTNPAARDDPQSPIYGMPILDVDKAGTVLFVKRGMASGYAGIQNELFFNDRTMMLFGDAKKMTEEIVKAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AD36</accession>
    <name>A0A0M7AD36_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 4">N5-carboxyaminoimidazole ribonucleotide mutase</fullName>
            <shortName evidence="3 4">N5-CAIR mutase</shortName>
            <ecNumber evidence="3 4">5.4.99.18</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">5-(carboxyamino)imidazole ribonucleotide mutase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3 7" type="primary">purE</name>
        <name evidence="7" type="ORF">LAX5112_03154</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3 4">Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3 4">
            <text>5-carboxyamino-1-(5-phospho-D-ribosyl)imidazole + H(+) = 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate</text>
            <dbReference type="Rhea" id="RHEA:13193"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:58730"/>
            <dbReference type="ChEBI" id="CHEBI:77657"/>
            <dbReference type="EC" id="5.4.99.18"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3 4">Purine metabolism; IMP biosynthesis via de novo pathway; 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate from 5-amino-1-(5-phospho-D-ribosyl)imidazole (N5-CAIR route): step 2/2.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the AIR carboxylase family. Class I subfamily.</text>
    </comment>
    <dbReference type="EC" id="5.4.99.18" evidence="3 4"/>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72362.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672616.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03154"/>
    <dbReference type="EnsemblBacteria" id="CTQ72362">
        <property type="protein sequence ID" value="CTQ72362"/>
        <property type="gene ID" value="LAX5112_03154"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00074">
        <property type="reaction ID" value="UER00943"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034023">
        <property type="term" value="F:5-(carboxyamino)imidazole ribonucleotide mutase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006189">
        <property type="term" value="P:'de novo' IMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01929">
        <property type="entry name" value="PurE_classI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033747">
        <property type="entry name" value="PurE_ClassI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000031">
        <property type="entry name" value="PurE_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024694">
        <property type="entry name" value="PurE_prokaryotes"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00731">
        <property type="entry name" value="AIRC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001338">
        <property type="entry name" value="AIR_carboxylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01001">
        <property type="entry name" value="AIRC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01162">
        <property type="entry name" value="purE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3 4" id="KW-0413">Isomerase</keyword>
    <keyword evidence="1 3 4" id="KW-0658">Purine biosynthesis</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AIRC" evidence="6">
        <location>
            <begin position="4"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3 5">
        <location>
            <position position="12"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3 5">
        <location>
            <position position="15"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3 5">
        <location>
            <position position="42"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRNR" id="PIRNR001338"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR001338-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM01001"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ72362.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="164" mass="16758" checksum="85F612797D393F83" modified="2015-12-09" version="1">MAQADVAIIMGSQSDWPTMKHAADTLAELGISFEVRIVSAHRTPDRMYEFAKGAKAEGFKVIIAGAGGAAHLPGMTAALTPLPVFGVPVESRALSGEDSLLSIVQMPGGIPVGTLAIGKAGATNAALLAGAVLALNNSDVEEALETYRAGRTAAVAEFPVDDTN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AE51</accession>
    <name>A0A0M7AE51_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Acetyltransferase</fullName>
            <ecNumber evidence="2">2.3.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ttr</name>
        <name evidence="2" type="ORF">LAX5112_03355</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.3.1.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72897.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672768.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72897">
        <property type="protein sequence ID" value="CTQ72897"/>
        <property type="gene ID" value="LAX5112_03355"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="22"/>
            <end position="190"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72897.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="190" mass="20744" checksum="818E7BBF2403B68D" modified="2015-12-09" version="1">MTEDTPKSSEQTIPQFKPDAPLHLLSAKDANAVLPELGALLKSCVEDGAGIGFILPLSSEKAEQFWQSRLDDMELGAAYMIIARGESQIAGVVMLCLAPQDNGPHRAEVAKLMVHPDHRRKGIARKLMAAIDDLALSLGRWLLVLDTVTGDRAEHLYPTCGYQKVGVIPDYAYGSHGDLDATTVFYKDLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEP2</accession>
    <name>A0A0M7AEP2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative membrane-anchored protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03345</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72876.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672759.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03345"/>
    <dbReference type="EnsemblBacteria" id="CTQ72876">
        <property type="protein sequence ID" value="CTQ72876"/>
        <property type="gene ID" value="LAX5112_03345"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025833">
        <property type="entry name" value="GDYXXLXY"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14345">
        <property type="entry name" value="GDYXXLXY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="39"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72876.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="192" mass="20523" checksum="A47DF8033AB2EA3A" modified="2015-12-09" version="1">MTAEALDQQPATRSRKLSPFLKWGLIALVQLTLIALPLIGRLDVQMSGKEVTLALVPVDPRDLLRGDYVIINLAIARVSIDLPGANEVKEGDRVYVRLAPGTDGVMRVASVGKAQDASGTAAMAGTVRSVGGSDIRIDYGIDAFFLPEGDGLIIEDLDTERVNLVVAVTEDGRSLPLRLLVDGKPFKNDAAF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEQ2</accession>
    <name>A0A0M7AEQ2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">rpfC</name>
        <name evidence="8" type="ORF">LAX5112_03065</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72124.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672537.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03065"/>
    <dbReference type="EnsemblBacteria" id="CTQ72124">
        <property type="protein sequence ID" value="CTQ72124"/>
        <property type="gene ID" value="LAX5112_03065"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="3 4" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0808">Transferase</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="46"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="72"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="107"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="150"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="183"/>
            <end position="207"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="227"/>
            <end position="247"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="268"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="316"/>
            <end position="337"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="368"/>
            <end position="387"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="393"/>
            <end position="414"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="435"/>
            <end position="455"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="461"/>
            <end position="484"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="577"/>
            <end position="597"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="609"/>
            <end position="633"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="6">
        <location>
            <begin position="687"/>
            <end position="904"/>
        </location>
    </feature>
    <feature type="domain" description="Response regulatory" evidence="7">
        <location>
            <begin position="927"/>
            <end position="1041"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="4">
        <location>
            <position position="976"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ72124.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="1130" mass="123026" checksum="DCE753BD95F95E97" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFH3</accession>
    <name>A0A0M7AFH3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">DUF4149 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">LAX5112_03385</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72960.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03385"/>
    <dbReference type="EnsemblBacteria" id="CTQ72960">
        <property type="protein sequence ID" value="CTQ72960"/>
        <property type="gene ID" value="LAX5112_03385"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025423">
        <property type="entry name" value="DUF4149"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13664">
        <property type="entry name" value="DUF4149"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 4" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2 4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="6"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="45"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="73"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="107"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="domain" description="DUF4149" evidence="5">
        <location>
            <begin position="10"/>
            <end position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF13664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ72960.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="133" mass="13849" checksum="98BC336A120FD099" modified="2015-12-09" version="1">MIVTSATLLVTALLFGGMTLYSFGFAAFVFTALPAETAGPLIRKAFPHFYLFVIAASLAAAFGTGFLDVVSCVVMVLIAASAIFARQVLMPMINAATDAGETKRFKVLHGASVIITLAHIIASAAVLIRIAVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFN2</accession>
    <name>A0A0M7AFN2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Proclavaminate amidinohydrolase</fullName>
            <ecNumber evidence="5">3.5.3.22</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">pah_4</name>
        <name evidence="5" type="ORF">LAX5112_03682</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the arginase family. Agmatinase subfamily.</text>
    </comment>
    <dbReference type="EC" id="3.5.3.22" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ73888.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673027.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03682"/>
    <dbReference type="EnsemblBacteria" id="CTQ73888">
        <property type="protein sequence ID" value="CTQ73888"/>
        <property type="gene ID" value="LAX5112_03682"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033972">
        <property type="term" value="F:proclavaminate amidinohydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901564">
        <property type="term" value="P:organonitrogen compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005925">
        <property type="entry name" value="Agmatinase-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006035">
        <property type="entry name" value="Ureohydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023696">
        <property type="entry name" value="Ureohydrolase_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020855">
        <property type="entry name" value="Ureohydrolase_Mn_BS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11358">
        <property type="entry name" value="PTHR11358"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00491">
        <property type="entry name" value="Arginase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF036979">
        <property type="entry name" value="Arginase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52768">
        <property type="entry name" value="SSF52768"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01230">
        <property type="entry name" value="agmatinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01053">
        <property type="entry name" value="ARGINASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51409">
        <property type="entry name" value="ARGINASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009227"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003684"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ73888.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="320" mass="34890" checksum="02DBD5AD64013611" modified="2015-12-09" version="1">MTSHGYESGRLNLPFVGICTFGKYPYQPDWDAIDADVAVLGAPFDFGTQWRSGARMGPRAIREASTLFSFGHAGAYDFEDDITYLPAETTRIVDIGDADIVHTDTIESHKRIEFGVRKILEAGALPVVLGGDHSINIPCINAFDGEEPIHVVQIDAHLDFVDERHGVRYGHGNPMRRAAEKSYVTGLTQIGIRNVSSTARDGYEAARQMGSDIVSVRQARKLGTDVLLAKIPKGKRYYLTLDIDAFDPSIAPGTGTPSHGGFLYYEILELIDGLAKQGEIVGMDLVEVAPDYDPAGVTSVLAAQILMNTIGRILHQRSKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGG0</accession>
    <name>A0A0M7AGG0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Type IV secretory pathway, VirB4 components</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03324</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72833.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03324"/>
    <dbReference type="EnsemblBacteria" id="CTQ72833">
        <property type="protein sequence ID" value="CTQ72833"/>
        <property type="gene ID" value="LAX5112_03324"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014588">
        <property type="entry name" value="ATPase_Atu1862_pred"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008571">
        <property type="entry name" value="HerA-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002789">
        <property type="entry name" value="HerA_central"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42957">
        <property type="entry name" value="PTHR42957"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01935">
        <property type="entry name" value="DUF87"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF034081">
        <property type="entry name" value="ATPase_Atu1862"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF87" evidence="1">
        <location>
            <begin position="15"/>
            <end position="80"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01935"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72833.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="499" mass="54405" checksum="3EE56166356931C9" modified="2015-12-09" version="1">MALVCARLCMTVQIDIGDMAGGKRAGLDLEELLATRLLVQGNSGSGKSHLLRRILEQSAQWVQQAIIDPEGDFVTLADKYGHVVVDAVGTEKDLKMIAGRVRQHRVSVVLNLEGLDADRQMKAAATFLDGLFDADRDLWYPMLVVVDEAQLFAPAAAGEVTEEARRRSLGAMTDLMCRGRKRGLAGIIATQRLAKLAKNVAAEASNFLMGRTFLDIDMARAADLLGMERRQAESFRNLDRGHFIALGPAVSRRPIPVKIGPVETAGRGGGPKLMPLPEQPKEEAKDLIFTRSPDEIPVRPRIAEPVASTDDVLNQLTSAGDAAEADIPQADNLFEHGEREEKIDQIITEILDEDEAAFQPIASLYQDFQVRCRIAKLTGGTPDLQTFREKLSVARAGVEKGEVDDSAWQQAELIAAELPEDMRGVYLLLAKAALAKAPCPGNIEIATAYGTRSPGRARWLLSHMEERGFLVCATDLRGNRIVTLTDLGWRTEPGDEAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGN2</accession>
    <name>A0A0M7AGN2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Putative small protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03583</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73576.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03583"/>
    <dbReference type="EnsemblBacteria" id="CTQ73576">
        <property type="protein sequence ID" value="CTQ73576"/>
        <property type="gene ID" value="LAX5112_03583"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009531">
        <property type="entry name" value="DUF1150"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06620">
        <property type="entry name" value="DUF1150"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ73576.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="94" mass="10183" checksum="0FB37AA51EA85E0B" modified="2015-12-09" version="1">MHNTNSPFWADDNDIAEVMTVDELSELGTGDVAYIKAVKAGDLKEMFPDVPPLEDDLTLYALLNADGTPILLADSRAAALANAFEQELEMVSLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGV4</accession>
    <name>A0A0M7AGV4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Fatty acyl-CoA reductase</fullName>
            <ecNumber evidence="2">1.2.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">acr1_1</name>
        <name evidence="2" type="ORF">LAX5112_03675</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the short-chain dehydrogenases/reductases (SDR) family.</text>
    </comment>
    <dbReference type="EC" id="1.2.1.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ73867.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673022.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03675"/>
    <dbReference type="EnsemblBacteria" id="CTQ73867">
        <property type="protein sequence ID" value="CTQ73867"/>
        <property type="gene ID" value="LAX5112_03675"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00106">
        <property type="entry name" value="adh_short"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU000363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73867.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="272" mass="28772" checksum="479BC9B6F4B132AE" modified="2015-12-09" version="1">MQKTILLTGATDGIGLETAKRLAADGHTLLIHGRNPDKLDRVKADLEALPGAGEVEAYVADFSDLADVNSLADTIRNHHNHLDVLINNAGILRTQDPLNKDGMDVRFVVNTIAPYLLTRKLLPLMGNAGRVVNLSSAAQAPVNLKALAGQQGASDMEAYAQSKLAITMWTRDLARELGSDGPVIVAVNPASLLGTKMVKEGFGVSGSDIGVGVDILMRASLSEEFQGRSGAYFDNDSRRFADPHPSGMDPQACAEVVATIRDVLAHAGLPAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AH22</accession>
    <name>A0A0M7AH22_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">YHS domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03679</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ73881.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673026.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ73881">
        <property type="protein sequence ID" value="CTQ73881"/>
        <property type="gene ID" value="LAX5112_03679"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006311">
        <property type="entry name" value="TAT_signal"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809484" evidence="1">
        <location>
            <begin position="28"/>
            <end position="144"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73881.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="144" mass="15698" checksum="82E46E3CF97A4E54" modified="2015-12-09" version="1">MMNRRFVLGLAAASVAAIALPSAPAFAKDPLALTGYDPVSYFSGRAPAKGSLEFTAQHRGKTYQFSSAQNRDAFAANPSRFAPQYDGYCAYGVARGYKVGVDPLAYKVVDGKLYVNYSRSVQRTWSRDVPGFISKANQNWPSLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AH31</accession>
    <name>A0A0M7AH31_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03683</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ73891.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673028.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03683"/>
    <dbReference type="EnsemblBacteria" id="CTQ73891">
        <property type="protein sequence ID" value="CTQ73891"/>
        <property type="gene ID" value="LAX5112_03683"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="36"/>
            <end position="201"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73891.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="203" mass="21701" checksum="92C85954855417C5" modified="2015-12-09" version="1">MTDPVDQQFQIVSGFPEDQRETAAALFWQAFSGKLGKILAPDDKALSLIARLLDSDFSISALDKDGELKGMAGFKTKEGALVAGSLSDMTAVYGLFGGLWRGIVLDLLEREPEPGLLLMDGIFVSAEARGLGVGTALLNAICSAAVARGCSRVRLDVIDTNLRARALYERSGFVPAGTEETGPFKYIFGFSSATRMEKPMQAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHA1</accession>
    <name>A0A0M7AHA1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transposase IS116/IS110/IS902 family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03434</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73133.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03434"/>
    <dbReference type="EnsemblBacteria" id="CTQ73133">
        <property type="protein sequence ID" value="CTQ73133"/>
        <property type="gene ID" value="LAX5112_03434"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003346">
        <property type="entry name" value="Transposase_20"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002525">
        <property type="entry name" value="Transposase_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01548">
        <property type="entry name" value="DEDD_Tnp_IS110"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02371">
        <property type="entry name" value="Transposase_20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DEDD_Tnp_IS110" evidence="1">
        <location>
            <begin position="5"/>
            <end position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01548"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73133.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="268" mass="30381" checksum="1440CDE8798BE1B9" modified="2015-12-09" version="1">MKPFNKGQKNDYNDAEAIAEAALRPNLRTVSEKTQDQLDLQALHRVRSRLVSRRTGTINQIRAFLIEQGITIRKGLRAVQNSLLAILDQRRDEISPRMRDLILDLQADWKYLDERIESVSAEIEEVSRQEADCRNLMTVPGIGPIISTAVVAAIGKGEAFEKDRDLAAWVGLIPRQYSTGGGTTLGRISKRGSRYLRMLFVQAAKIILMRPHNWPKLSFGTWLVEADQRMHRNKLAVALANKLARIAWSVLRYERAFDAHRNTVAEAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHD8</accession>
    <name>A0A0M7AHD8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">D-malate degradation protein R</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">dmlR_10</name>
        <name evidence="3" type="ORF">LAX5112_03448</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73173.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008191246.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03448"/>
    <dbReference type="EnsemblBacteria" id="CTQ73173">
        <property type="protein sequence ID" value="CTQ73173"/>
        <property type="gene ID" value="LAX5112_03448"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="8"/>
            <end position="63"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ73173.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="297" mass="32534" checksum="5B311A50C5695A81" modified="2015-12-09" version="1">MEASIEHLKSLMVFAQVADSGSFSAAGRHLGLTRAVVSYHVNKLEDAYGLSLFHRAPRSLKITEAGAQLLGHCRVIMDETVAAQRAIERYKQEPEGVLRISCPVSVGLNHVVPVLGDFHRLYPKIKLNVSFSDTVVDILEEGFDLAIRGAPLPDSDLKATRLATISTCLCAAPNYFQTRSRPKTIDDLRDHQWVLHMNKQKVEILLPGGASKVFEPEGSITTNNAVARTAFVEAGHGIGRIPRYDADPKIRAGLLEEVLPGTRLPEIAIYGVFPPGAAMSSNLRLLLDFTKQAFQTN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHF2</accession>
    <name>A0A0M7AHF2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Glutathione S-transferase GST-6.0</fullName>
            <ecNumber evidence="3">2.5.1.18</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">gstB_4</name>
        <name evidence="3" type="ORF">LAX5112_03750</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.5.1.18" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74077.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673074.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03750"/>
    <dbReference type="EnsemblBacteria" id="CTQ74077">
        <property type="protein sequence ID" value="CTQ74077"/>
        <property type="gene ID" value="LAX5112_03750"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004364">
        <property type="term" value="F:glutathione transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006749">
        <property type="term" value="P:glutathione metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010987">
        <property type="entry name" value="Glutathione-S-Trfase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036282">
        <property type="entry name" value="Glutathione-S-Trfase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040079">
        <property type="entry name" value="Glutathione_S-Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004045">
        <property type="entry name" value="Glutathione_S-Trfase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13417">
        <property type="entry name" value="GST_N_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00019">
        <property type="entry name" value="Glutathione_Transferase_(cytos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47616">
        <property type="entry name" value="SSF47616"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50405">
        <property type="entry name" value="GST_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50404">
        <property type="entry name" value="GST_NTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="GST N-terminal" evidence="1">
        <location>
            <begin position="1"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="domain" description="GST C-terminal" evidence="2">
        <location>
            <begin position="79"/>
            <end position="203"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50404"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50405"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ74077.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="203" mass="22472" checksum="122DC0202532CD76" modified="2015-12-09" version="1">MYKIVGYPQTRAMRVMWLLEELGEPYDIDPAMPQSEGIREVNPAGKVPVLIDGDLILPESIAICQYLADKHGKFTFPAGTKERAIQDSFTQLAIDILEGALWTAAKNSFIHPKELRVPEIKPVCKAEFAEGLRILDARMGEGPYVMGETFTVPDVILGHCGAWAVTAKFDLPKEGRIYDYFKALRNRPGYKAMMAKVVAAAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AI49</accession>
    <name>A0A0M7AI49_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">NADH-quinone oxidoreductase subunit D</fullName>
            <ecNumber evidence="7">7.1.1.-</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">NADH dehydrogenase I subunit D</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">NDH-1 subunit D</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7 10" type="primary">nuoD</name>
        <name evidence="10" type="ORF">LAX5112_03487</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 7">NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>a quinone + 5 H(+)(in) + NADH = a quinol + 4 H(+)(out) + NAD(+)</text>
            <dbReference type="Rhea" id="RHEA:57888"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:24646"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:132124"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="7">NDH-1 is composed of 14 different subunits. Subunits NuoB, C, D, E, F, and G constitute the peripheral sector of the complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cell membrane</location>
            <topology evidence="7">Peripheral membrane protein</topology>
            <orientation evidence="7">Cytoplasmic side</orientation>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7 8">Belongs to the complex I 49 kDa subunit family.</text>
    </comment>
    <dbReference type="EC" id="7.1.1.-" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73284.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672873.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03487"/>
    <dbReference type="EnsemblBacteria" id="CTQ73284">
        <property type="protein sequence ID" value="CTQ73284"/>
        <property type="gene ID" value="LAX5112_03487"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050136">
        <property type="term" value="F:NADH dehydrogenase (quinone) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048038">
        <property type="term" value="F:quinone binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.645.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01358">
        <property type="entry name" value="NDH1_NuoD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001135">
        <property type="entry name" value="NADH_Q_OxRdtase_suD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014029">
        <property type="entry name" value="NADH_UbQ_OxRdtase_49kDa_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022885">
        <property type="entry name" value="NDH1_su_D/H"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029014">
        <property type="entry name" value="NiFe-Hase_large"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11993">
        <property type="entry name" value="PTHR11993"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00346">
        <property type="entry name" value="Complex1_49kDa"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56762">
        <property type="entry name" value="SSF56762"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01962">
        <property type="entry name" value="NuoD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00535">
        <property type="entry name" value="COMPLEX1_49K"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7" id="KW-0472">Membrane</keyword>
    <keyword evidence="5 7 8" id="KW-0520">NAD</keyword>
    <keyword evidence="10" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3 7" id="KW-0874">Quinone</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7 8" id="KW-1278">Translocase</keyword>
    <keyword evidence="2 7 8" id="KW-0813">Transport</keyword>
    <keyword evidence="6 7" id="KW-0830">Ubiquinone</keyword>
    <feature type="domain" description="Complex1_49kDa" evidence="9">
        <location>
            <begin position="122"/>
            <end position="394"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002378"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022719"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023075"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01358"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU003685"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF00346"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ73284.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="394" mass="44466" checksum="F6BD4EED35890882" modified="2015-12-09" version="1">MAEAQVRNFNINFGPQHPAAHGVLRLVLELDGEVVTRVDPHIGLLHRGTEKLIEQKTYLQAIPYFDRLDYVAPMNQEHAFALAVERMLGIEVPKRGQLVRVLYSEIGRVLSHLLNVTTQAMDVGALTPPLWGFEPREELMVFYERACGARMHAAYVRPGGVHQDLPRDLLDDIWDFCDPFLQTLDDIEGLLTDNRIFKQRNVDIGVVDLDDAWAWGFSGVMVRGSGAPWDLRKSQPYECYSELDFDIPIGKNGDCYDRYLIRMDEMRQSIRIMKQCLEKLTVETGPVSSADGKIVPPKRGEMKRSMESLIHHFKLYTEGYHVPPGEVYAAVEAPKGEFGVYLVADGTNKPYRCKIKAPGYAHLSAMDFVCRGHQLADVSAVLGSMDIVFGEVDR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AI64</accession>
    <name>A0A0M7AI64_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Chromosome-partitioning protein ParB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">parB_1</name>
        <name evidence="6" type="ORF">LAX5112_03770</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the ParB family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74132.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673091.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03770"/>
    <dbReference type="EnsemblBacteria" id="CTQ74132">
        <property type="protein sequence ID" value="CTQ74132"/>
        <property type="gene ID" value="LAX5112_03770"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041468">
        <property type="entry name" value="HTH_ParB/Spo0J"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004437">
        <property type="entry name" value="ParB/RepB/Spo0J"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003115">
        <property type="entry name" value="ParB/Sulfiredoxin_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036086">
        <property type="entry name" value="ParB/Sulfiredoxin_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17762">
        <property type="entry name" value="HTH_ParB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02195">
        <property type="entry name" value="ParBc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00470">
        <property type="entry name" value="ParB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF110849">
        <property type="entry name" value="SSF110849"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00180">
        <property type="entry name" value="parB_part"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ParB" evidence="5">
        <location>
            <begin position="38"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="19"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="31"/>
            <end position="55"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00025472"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM00470"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ74132.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="301" mass="33035" checksum="95CE5A18503ED8B5" modified="2015-12-09" version="1">MADKDVKNKRLGRGLAALIGDSAQEASPAPEKVVRDTRRVPIEHIEPNPRNPRKTFTEKDLADLSESLKAKGIVQPILVRPAAGKTNRFEIIAGERRWRAAQRAGLHEAPIIIRDVTDQEALELAIIENVQRADLNPIEEAMGYEQLTADFSYSQGELAKVIGKSRSHVANTMRLLKLPNSVKDYLAEGLLTAGHARALITVDDPAALAELIVEKGLTVRDAEKLAQDPDALAKLKGDKTPTEKLQKDADTKALEKRLADTLGLKVTVGHKSGKESGDLKIKYTSLEQLDQICRLLGVENR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AII6</accession>
    <name>A0A0M7AII6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03851</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74401.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673165.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03851"/>
    <dbReference type="EnsemblBacteria" id="CTQ74401">
        <property type="protein sequence ID" value="CTQ74401"/>
        <property type="gene ID" value="LAX5112_03851"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009915">
        <property type="entry name" value="NnrU_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07298">
        <property type="entry name" value="NnrU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="36"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="76"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="113"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="164"/>
            <end position="188"/>
        </location>
    </feature>
    <feature type="domain" description="NnrU" evidence="2">
        <location>
            <begin position="4"/>
            <end position="189"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07298"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ74401.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="191" mass="20877" checksum="61FD71F5CB62665D" modified="2015-12-09" version="1">MFLLIAGLILFLGIHSLPMFADKRAALEEKFGVLGYKGLFAVVSAIGFVMIIYGYGAARAEGPAILYDPPFWLRHVTMLFMIPVFIFLVAAYVPCRIKKALKHPMLVAVKLWAFSHLLTNGDLASVLLFGSFLVWAVADRISLKRRGLGGGAVMTKEPGKFSDIIVILVGLGLYVLFALKLHMLLIGVPVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJA9</accession>
    <name>A0A0M7AJA9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04159</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75245.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75245">
        <property type="protein sequence ID" value="CTQ75245"/>
        <property type="gene ID" value="LAX5112_04159"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ75245.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="53" mass="6180" checksum="3B88B7560513DAAE" modified="2015-12-09" version="1">MSKVSKTTICCEANDHYDRIEYYAKSRDHRLVPRKWRDEAGPNPLVMQGLNVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AK64</accession>
    <name>A0A0M7AK64_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Mycobacterial persistence regulator A</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">mprA</name>
        <name evidence="3" type="ORF">LAX5112_03717</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ73984.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673052.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03717"/>
    <dbReference type="EnsemblBacteria" id="CTQ73984">
        <property type="protein sequence ID" value="CTQ73984"/>
        <property type="gene ID" value="LAX5112_03717"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="2">
        <location>
            <begin position="3"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="1">
        <location>
            <position position="54"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ73984.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="131" mass="14255" checksum="C32A3134BEFA0D6B" modified="2015-12-09" version="1">MARILLTEDDEAVRSFVKRALELDGHTVDPAEDGGEAVEILTREKGGYDLLLSDIKMPVMDGIALALHTARDYPNLPILLMTGFADQRERASGLDALVHDVVTKPFSLADIRAAVRGAISGVQPQANRRYA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKI8</accession>
    <name>A0A0M7AKI8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Succinyl-CoA synthetase subunit beta</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_04321</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000022">
        <property type="protein sequence ID" value="CTQ75665.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673543.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000022.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04321"/>
    <dbReference type="EnsemblBacteria" id="CTQ75665">
        <property type="protein sequence ID" value="CTQ75665"/>
        <property type="gene ID" value="LAX5112_04321"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1490.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.261">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011761">
        <property type="entry name" value="ATP-grasp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013815">
        <property type="entry name" value="ATP_grasp_subdomain_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003781">
        <property type="entry name" value="CoA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032875">
        <property type="entry name" value="Succ_CoA_lig_flav_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016102">
        <property type="entry name" value="Succinyl-CoA_synth-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13380">
        <property type="entry name" value="CoA_binding_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13607">
        <property type="entry name" value="Succ_CoA_lig"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00881">
        <property type="entry name" value="CoA_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52210">
        <property type="entry name" value="SSF52210"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50975">
        <property type="entry name" value="ATP_GRASP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ATP-grasp" evidence="2">
        <location>
            <begin position="479"/>
            <end position="670"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00409"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ75665.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="677" mass="70668" checksum="23386DFAA1BE3203" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKK1</accession>
    <name>A0A0M7AKK1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Squalene synthase HpnD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04065</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ74972.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673347.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04065"/>
    <dbReference type="EnsemblBacteria" id="CTQ74972">
        <property type="protein sequence ID" value="CTQ74972"/>
        <property type="gene ID" value="LAX5112_04065"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009058">
        <property type="term" value="P:biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.600.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008949">
        <property type="entry name" value="Isoprenoid_synthase_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002060">
        <property type="entry name" value="Squ/phyt_synthse"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00494">
        <property type="entry name" value="SQS_PSY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48576">
        <property type="entry name" value="SSF48576"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ74972.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="283" mass="31437" checksum="1B7CEE52A6098134" modified="2015-12-09" version="1">MAEDFEHAADVVRQYDKDRYLSALLAPEDHRPGLMALYGFNAEISRIREIVSEPLPGEVRLQWWRDFLEGTSHGAFGANPVASALAQTIDRYKLPKNGLIAMTEARIFDLYNDPMPSLNDLEGYTGETVSGLIQLACWVLNNGEDPGTATVAGHAGVAYGMTGLMRALPWHASRHQMFLPKDVLDRHGVDPQTVFKGETTPELAAALSEMRAHVRHHMSRVKQAASDVPDNCRAAFLPLSLVEPFLKKMEAVDNNPLKDVAELSQLRRQWILWRASGKPVASL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AL90</accession>
    <name>A0A0M7AL90_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_04315</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000022">
        <property type="protein sequence ID" value="CTQ75649.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673540.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000022.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04315"/>
    <dbReference type="EnsemblBacteria" id="CTQ75649">
        <property type="protein sequence ID" value="CTQ75649"/>
        <property type="gene ID" value="LAX5112_04315"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019494">
        <property type="entry name" value="FIST_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013702">
        <property type="entry name" value="FIST_domain_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08495">
        <property type="entry name" value="FIST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10442">
        <property type="entry name" value="FIST_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00897">
        <property type="entry name" value="FIST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01204">
        <property type="entry name" value="FIST_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FIST" evidence="1">
        <location>
            <begin position="37"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="domain" description="FIST_C" evidence="2">
        <location>
            <begin position="245"/>
            <end position="375"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00897"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM01204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ75649.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="398" mass="43180" checksum="D7D34C7B141ECC86" modified="2015-12-09" version="1">MDANAWTQYGCGVVALTARQPDDARFWADLGAAAQSSVYSLGLIFYSQDSFPADLLRSKMAEHAGGLPYAACSTADEIGGVDEGAGRCLAILFPKDQFAITPFRIDGIRSIGFDRIVAQVKRERQVFEHDPAPFARTEDKGDTFALCLIDGLSVVEEMVTAALHWALEDIPLLGGSAGDSMHFSKTSLILNGAAGDDCAIVLLCRSRIPFKIFKTDNFIPTDRKLVVTRSDPARRIIYEFNAAEAASEYALAVGLDPSSLSPLSFASHPLVVRVGGEYYCRSVQKVNPDGSLSFFCAIDDGIVLTVAEPTGMSRSTREAFESVDAEIGGIDFVLGFDCALRRIDAQNRQATQRINAIYDAYNVLGFNTYGEQYLSMHLNHTFTGIAFAKPPAEPEPPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AL95</accession>
    <name>A0A0M7AL95_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Flagellar biosynthesis repressor FlbT</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04080</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ75000.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008191739.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04080"/>
    <dbReference type="EnsemblBacteria" id="CTQ75000">
        <property type="protein sequence ID" value="CTQ75000"/>
        <property type="gene ID" value="LAX5112_04080"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048027">
        <property type="term" value="F:mRNA 5'-UTR binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006402">
        <property type="term" value="P:mRNA catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:1902209">
        <property type="term" value="P:negative regulation of bacterial-type flagellum assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009967">
        <property type="entry name" value="Flagellum_FlbT"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07378">
        <property type="entry name" value="FlbT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF009533">
        <property type="entry name" value="FlbT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0966">Cell projection</keyword>
    <keyword evidence="2" id="KW-0969">Cilium</keyword>
    <keyword evidence="2" id="KW-0282">Flagellum</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="128"/>
            <end position="155"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75000.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="155" mass="17333" checksum="9A8D394EBABD15B2" modified="2015-12-09" version="1">MKIALKSGERLFINGAVIRAERKTSIELMNDAVFLLESHVLQPEEATTPLKQLYFILQTMIMDPAAAPAAKDMFHVVLASVSGAFSSSEVLDKLEEVGQLARKDRWFEAMKTVRALYPLEARLMAADHRARQEEEKASGFSARQPAHSEPHLELV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALC0</accession>
    <name>A0A0M7ALC0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04149</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75216.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673401.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04149"/>
    <dbReference type="EnsemblBacteria" id="CTQ75216">
        <property type="protein sequence ID" value="CTQ75216"/>
        <property type="gene ID" value="LAX5112_04149"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809520" evidence="1">
        <location>
            <begin position="21"/>
            <end position="252"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75216.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="252" mass="26295" checksum="E66B8F0A0CDE2BBD" modified="2015-12-09" version="1">MLKTLAGSLVLAALPIAALAGGSHSDHAIHQKGAVLSQENTEIDQNYDILAAHVHRSGRTVTFHMTLKGTAGATTPEPAGQLAGAPVEAYVWPTSLKPDAVGFESEDGILALVATSHPDFDDTPLFDEDGDGDLTNDGAKWHSHWVVLTPNEACGSGALSVKDIPDGASPKMPATWPGLPIYIDSPGFSPVLKSKEITINVSFDDPAVADGMSYDGVTSALRVNQNIHAPLLCVVDVFDVASGDLSLPGKLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALL3</accession>
    <name>A0A0M7ALL3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">TRAP-type C4-dicarboxylate transport system, small permease component</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">LAX5112_04436</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ76015.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04436"/>
    <dbReference type="EnsemblBacteria" id="CTQ76015">
        <property type="protein sequence ID" value="CTQ76015"/>
        <property type="gene ID" value="LAX5112_04436"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007387">
        <property type="entry name" value="TRAP_DctQ"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35011">
        <property type="entry name" value="PTHR35011"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04290">
        <property type="entry name" value="DctQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="24"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="51"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="97"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="144"/>
            <end position="165"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ76015.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="199" mass="21944" checksum="E4C022E24E48AECB" modified="2015-12-09" version="1">MTGTHGGGALLLSMNRGLGAVEDTLNIIAALTIFIVMLVTTFQIFCRLAGYPIPGFLEASEQAIAVFAFLGVAYAQRYGAHIRMDMLVGAAHGRMRWFLEAVATLLGMILIAVLIRYSWSFFYNSWEVGDVTYDYGIPTWPSKLLVPFAFSIWFLRLTLQFIGFLRLFIWPKADPVAVPVIKTAADHAQDEASSAGGEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALM8</accession>
    <name>A0A0M7ALM8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF58 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04186</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75326.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673427.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04186"/>
    <dbReference type="EnsemblBacteria" id="CTQ75326">
        <property type="protein sequence ID" value="CTQ75326"/>
        <property type="gene ID" value="LAX5112_04186"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002881">
        <property type="entry name" value="DUF58"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01882">
        <property type="entry name" value="DUF58"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF58" evidence="1">
        <location>
            <begin position="56"/>
            <end position="143"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01882"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75326.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="307" mass="34407" checksum="62260846E05A217F" modified="2015-12-09" version="1">MASSTESVKLDQENWPNIIGDARSVADALPDLLVEASHVASSIIAGWHGRRRAGPGESFWQFRPFNMGEPAKRIDWRRSARDDHLYVREREWEAAHTVWLWADLSSSMEFQSRLSQVTKRDRALILMLALADMLAETGERIGLTGVTRPFSDRKAAERLADALTHLSKPVALPDPTDVKRFADVVLVSDFLDPLQDIAAWIAQVAGTGARGHIVQVLDPIEETFPFDGRVEFNDPEAGIRLTAGRAETWREEYHKRLEAHRAEIRDMARRAGWTYVLHHTDHSAAEPLLVLHSALSGNLDTMPRGGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALY9</accession>
    <name>A0A0M7ALY9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Neu5Ac permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">siaT_24</name>
        <name evidence="5" type="ORF">LAX5112_04325</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000022">
        <property type="protein sequence ID" value="CTQ75677.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008196534.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000022.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04325"/>
    <dbReference type="EnsemblBacteria" id="CTQ75677">
        <property type="protein sequence ID" value="CTQ75677"/>
        <property type="gene ID" value="LAX5112_04325"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010656">
        <property type="entry name" value="DctM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004681">
        <property type="entry name" value="TRAP_DctM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33362">
        <property type="entry name" value="PTHR33362"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06808">
        <property type="entry name" value="DctM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006066">
        <property type="entry name" value="HI0050"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00786">
        <property type="entry name" value="dctM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="6"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="60"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="146"/>
            <end position="169"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="175"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="227"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="252"/>
            <end position="269"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="281"/>
            <end position="302"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="314"/>
            <end position="336"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="343"/>
            <end position="360"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="366"/>
            <end position="390"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="411"/>
            <end position="432"/>
        </location>
    </feature>
    <feature type="domain" description="DctM" evidence="4">
        <location>
            <begin position="11"/>
            <end position="427"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF06808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ75677.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="435" mass="46099" checksum="3696905D0CE0F4FE" modified="2015-12-09" version="1">MEWYEALALLLGVIVALMAIGMPVALAFLAANIVGAWIFMGGERGIGQLLNNGLGSMTKFALVPIPLFLLMGEIFFHTGLGNRMFTAIDKLLGRLPGRLSYVTVMGGTAFSTLSGSSMGSTALLGSLMVPEMNRRGYKTHMSIGPILGTGGLAIIIPPSALAVLLATLAQIDVGALLIAGVIPGLILAGFYIATIWLQTKIDPSAAPAYDVEPMSLGAKLSLLVREVVPMVGVMVIIITLMINGFITPSEAAAFGALGVLILAAVFRCLTWEAMRKSITGALRVTLMAYLIVFGSATFSQLLAFSGASRGLVNWATSFELAPIAMLLVMFAVLLILGMFMEQISIMLLTVPIFFPLALTLGFDPIWFGLIMLLSLEISFTTPPFGLLLFVMKGVAPPGTTMRDIYTSAFPFIGCSLLVVALLVLFPGLALWLPGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANU8</accession>
    <name>A0A0M7ANU8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Cyclic di-GMP phosphodiesterase Gmr</fullName>
            <ecNumber evidence="6">3.1.4.52</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">gmr_12</name>
        <name evidence="6" type="ORF">LAX5112_04245</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.4.52" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75463.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673480.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000021.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04245"/>
    <dbReference type="EnsemblBacteria" id="CTQ75463">
        <property type="protein sequence ID" value="CTQ75463"/>
        <property type="gene ID" value="LAX5112_04245"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071111">
        <property type="term" value="F:cyclic-guanylate-specific phosphodiesterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01948">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01949">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00130">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.450">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001633">
        <property type="entry name" value="EAL_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035919">
        <property type="entry name" value="EAL_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000160">
        <property type="entry name" value="GGDEF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000014">
        <property type="entry name" value="PAS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035965">
        <property type="entry name" value="PAS-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00563">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00990">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13426">
        <property type="entry name" value="PAS_9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00052">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00267">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00091">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141868">
        <property type="entry name" value="SSF141868"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55785">
        <property type="entry name" value="SSF55785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00254">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00229">
        <property type="entry name" value="sensory_box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50883">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50887">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50112">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="13"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="152"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="4">
        <location>
            <begin position="176"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="domain" description="PAS" evidence="2">
        <location>
            <begin position="233"/>
            <end position="303"/>
        </location>
    </feature>
    <feature type="domain" description="GGDEF" evidence="5">
        <location>
            <begin position="390"/>
            <end position="523"/>
        </location>
    </feature>
    <feature type="domain" description="EAL" evidence="3">
        <location>
            <begin position="532"/>
            <end position="792"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50112"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ75463.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="809" mass="90854" checksum="61FBCDDD3FF0E4C6" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AP21</accession>
    <name>A0A0M7AP21_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">UDP-N-acetylglucosamine 1-carboxyvinyltransferase</fullName>
            <ecNumber evidence="7">2.5.1.7</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Enoylpyruvate transferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">UDP-N-acetylglucosamine enolpyruvyl transferase</fullName>
            <shortName evidence="7">EPT</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7 9" type="primary">murA</name>
        <name evidence="9" type="ORF">LAX5112_04494</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Cell wall formation. Adds enolpyruvyl to UDP-N-acetylglucosamine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>phosphoenolpyruvate + UDP-N-acetyl-alpha-D-glucosamine = phosphate + UDP-N-acetyl-3-O-(1-carboxyvinyl)-alpha-D-glucosamine</text>
            <dbReference type="Rhea" id="RHEA:18681"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57705"/>
            <dbReference type="ChEBI" id="CHEBI:58702"/>
            <dbReference type="ChEBI" id="CHEBI:68483"/>
            <dbReference type="EC" id="2.5.1.7"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="7">Cell wall biogenesis; peptidoglycan biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the EPSP synthase family. MurA subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.7" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000025">
        <property type="protein sequence ID" value="CTQ76166.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673701.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000025.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04494"/>
    <dbReference type="EnsemblBacteria" id="CTQ76166">
        <property type="protein sequence ID" value="CTQ76166"/>
        <property type="gene ID" value="LAX5112_04494"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00219"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008760">
        <property type="term" value="F:UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007049">
        <property type="term" value="P:cell cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008360">
        <property type="term" value="P:regulation of cell shape"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019277">
        <property type="term" value="P:UDP-N-acetylgalactosamine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01555">
        <property type="entry name" value="UdpNAET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.65.10.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00111">
        <property type="entry name" value="MurA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001986">
        <property type="entry name" value="Enolpyruvate_Tfrase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036968">
        <property type="entry name" value="Enolpyruvate_Tfrase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013792">
        <property type="entry name" value="RNA3'P_cycl/enolpyr_Trfase_a/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005750">
        <property type="entry name" value="UDP_GlcNAc_COvinyl_MurA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00275">
        <property type="entry name" value="EPSP_synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55205">
        <property type="entry name" value="SSF55205"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01072">
        <property type="entry name" value="murA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 7" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="1 7" id="KW-0132">Cell division</keyword>
    <keyword evidence="3 7" id="KW-0133">Cell shape</keyword>
    <keyword evidence="6 7" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 7" id="KW-0573">Peptidoglycan synthesis</keyword>
    <keyword evidence="7" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 7 9" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="EPSP_synthase" evidence="8">
        <location>
            <begin position="7"/>
            <end position="417"/>
        </location>
    </feature>
    <feature type="region of interest" description="Phosphoenolpyruvate binding" evidence="7">
        <location>
            <begin position="22"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="7">
        <location>
            <position position="126"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="102"/>
        </location>
        <ligand>
            <name>UDP-N-acetyl-alpha-D-glucosamine</name>
            <dbReference type="ChEBI" id="CHEBI:57705"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="316"/>
        </location>
        <ligand>
            <name>UDP-N-acetyl-alpha-D-glucosamine</name>
            <dbReference type="ChEBI" id="CHEBI:57705"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="338"/>
        </location>
        <ligand>
            <name>UDP-N-acetyl-alpha-D-glucosamine</name>
            <dbReference type="ChEBI" id="CHEBI:57705"/>
        </ligand>
    </feature>
    <feature type="modified residue" description="2-(S-cysteinyl)pyruvic acid O-phosphothioketal" evidence="7">
        <location>
            <position position="126"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00275"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ76166.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="429" mass="45568" checksum="C8953E9AF75BEA20" modified="2015-12-09" version="1">MDSIKVTGGAELNGIIPISGAKNAALPLMIASLLTDETLTLSNVPRLRDVAQLMQILSNHGVDYSVNGKRIGQDDLAGQTLNLTAREIVDTTAPYELVSKMRASFWVVGPLVARMHEAQVSLPGGCAIGTRPVDFFIQGLEALGADIEIEGGYVVVKAPGGLTGGRVEFPRVSVGATHTIMMAATLAKGETEIVNAAREPEVVDLARCLKAMGARIEGEGTSTIRIQGVPRLHGAHHAVVPDRIETGTYAMAVAMTGGDVFLQGARTELLESALDTLRQTGAEITATDEGLRVYRNGNGIQPADVTTEPFPGFPTDLQAQFMALMTKAGGKSRITETIFENRFMHVQELARLGAQIAIDGRTATVEGVSTLRGAPVMATDLRASVSLVIAGLSAEGETTVSRVYHLDRGFERLEDKLTRCGARIQRISG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AP31</accession>
    <name>A0A0M7AP31_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Inner membrane ABC transporter permease protein YcjP</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ycjP_2</name>
        <name evidence="7" type="ORF">LAX5112_04588</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000026">
        <property type="protein sequence ID" value="CTQ76417.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040450932.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000026.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04588"/>
    <dbReference type="EnsemblBacteria" id="CTQ76417">
        <property type="protein sequence ID" value="CTQ76417"/>
        <property type="gene ID" value="LAX5112_04588"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="71"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="108"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="141"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="184"/>
            <end position="207"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="213"/>
            <end position="233"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="240"/>
            <end position="261"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="72"/>
            <end position="262"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ76417.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="276" mass="30786" checksum="6245791E22C95673" modified="2015-12-09" version="1">MARAVSNNRKMINTAVAWLIGLLIFFPILWTILTSFKTEAQAIADPPIFLFFDWTLENYSVVQERSDYMRFLWNSIFLAGGSTILGLIIAVPAAWSMAFVPSKRTKDILLWMLSTKMLPAVGVLYPIYLLFIQLGLLDSRIGLTIVLMLINLPIIVWMLYTYFREIPGEILEAARMDGAGLKEELLYILTPMAIPGIASTMLLNFILAWNEAFWTLNLTAVNAAPLTAFIASYSSPEGLFFAKLSAASTMAIAPILILGWFSQKQLVRGLTFGAVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AP98</accession>
    <name>A0A0M7AP98_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04608</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000027">
        <property type="protein sequence ID" value="CTQ76487.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673795.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000027.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76487">
        <property type="protein sequence ID" value="CTQ76487"/>
        <property type="gene ID" value="LAX5112_04608"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ76487.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="294" mass="32543" checksum="431DC7F9A5D1C4F9" modified="2015-12-09" version="1">MTTSIEAAEQLAAKSTPNKLLVRLSTVCKALSANRGIDTNYVGATRKRWLAIHLALNMRSARKALGAVAPFARPSPTLEFQPDISGNRSDYLNDRQVIDLHFFRCMGHRMCEHQNGLAALQSDRFDIEEARKFAKTGGNAQKQLNALKLDRLHYANLFAFGAAAILSEQNKKLRTGSLNQATAIEAQITAKPPSNNANPKTWAEIFVAADLLKQLDIKVTGSAINEMRAVLFGWSKACQTRPDETLRTCRSVHRHLTGIEYPKKKSRKAARNTAAKSAVEPQSVPAPIWYQGMF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APR3</accession>
    <name>A0A0M7APR3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glycerate dehydrogenase</fullName>
            <ecNumber evidence="2">1.1.1.29</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">hprA</name>
        <name evidence="2" type="ORF">LAX5112_04584</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.1.1.29" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000026">
        <property type="protein sequence ID" value="CTQ76406.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04584"/>
    <dbReference type="EnsemblBacteria" id="CTQ76406">
        <property type="protein sequence ID" value="CTQ76406"/>
        <property type="gene ID" value="LAX5112_04584"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008465">
        <property type="term" value="F:glycerate dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006140">
        <property type="entry name" value="D-isomer_DH_NAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02826">
        <property type="entry name" value="2-Hacid_dh_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="2-Hacid_dh_C" evidence="1">
        <location>
            <begin position="4"/>
            <end position="151"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02826"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76406.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="192" mass="20887" checksum="835E4C526438C8B1" modified="2015-12-09" version="1">MGVGRTLRGRTLGLYGYGRIAKAVAGYAEAIGMNVQWWASDAGRERAIKDGARVAESREVFFNSSDIVSLHVRLKPETRGIITEADLANMQPRALLVNTSQSGLIATGVLEAEVARGRIFAAVDVFDQEPLRDRDNVLLTHSNVLPTPHVGYVTEDEFDLQFSDIFDQVIAYAAGAPIHMINPEAYAPSASL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQ29</accession>
    <name>A0A0M7AQ29_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Rhodocoxin reductase</fullName>
            <ecNumber evidence="3">1.18.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">thcD</name>
        <name evidence="3" type="ORF">LAX5112_04846</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.18.1.-" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000032">
        <property type="protein sequence ID" value="CTQ77235.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673993.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000032.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04846"/>
    <dbReference type="EnsemblBacteria" id="CTQ77235">
        <property type="protein sequence ID" value="CTQ77235"/>
        <property type="gene ID" value="LAX5112_04846"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.390.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023753">
        <property type="entry name" value="FAD/NAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016156">
        <property type="entry name" value="FAD/NAD-linked_Rdtase_dimer_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028202">
        <property type="entry name" value="Reductase_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07992">
        <property type="entry name" value="Pyr_redox_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14759">
        <property type="entry name" value="Reductase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55424">
        <property type="entry name" value="SSF55424"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Pyr_redox_2" evidence="1">
        <location>
            <begin position="4"/>
            <end position="301"/>
        </location>
    </feature>
    <feature type="domain" description="Reductase_C" evidence="2">
        <location>
            <begin position="320"/>
            <end position="386"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF14759"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ77235.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="394" mass="42468" checksum="A9684112338CB8C2" modified="2015-12-09" version="1">MQEEIVIVGAGQAGAQVAQSLRQGGFEGALRLIGDEAHPPYQRPPLSKKFLAGEIGAEGLWLRPPAFYTTNNIDHIPNTSVVGIDRAAKRVQLENGDTISYGKLVLATGTKARLLPIKGSDKDGVVTLRSIGDVDAIRDRLSKSRYLVIIGAGYIGLEVAAVARALDKDVCVIEAQDRPMKRVVSETVSGFFAKLHADNGVQLRLNTGIEALEGREGVESVKLNNGDSVLADLVLVAVGAEPNDQLATDAGLDTDNGILVDGAAQTSDPDIYAVGDCTRFHSGRYSRSVRMESVQNAIDQAKIAAQALLGQDVDYDPLPWFWSDQYEIKLQIAGLSEGYDKTVVVGDPAAKKFYVAYLKDNALIAVDSINSPRSHMMARRVIGETWRDDLLPEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQA7</accession>
    <name>A0A0M7AQA7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04872</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000033">
        <property type="protein sequence ID" value="CTQ77318.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77318">
        <property type="protein sequence ID" value="CTQ77318"/>
        <property type="gene ID" value="LAX5112_04872"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77318.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="57" mass="6087" checksum="C4256828B6810D2B" modified="2015-12-09" version="1">MKRAHRTAHARIWTVLGIALPLAFFTVLALRQTPPADRPAILIEAPANAAATGEGNQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARA7</accession>
    <name>A0A0M7ARA7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04998</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000038">
        <property type="protein sequence ID" value="CTQ77658.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008194408.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000038.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04998"/>
    <dbReference type="EnsemblBacteria" id="CTQ77658">
        <property type="protein sequence ID" value="CTQ77658"/>
        <property type="gene ID" value="LAX5112_04998"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009560">
        <property type="entry name" value="DUF1176"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06674">
        <property type="entry name" value="DUF1176"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809555" evidence="1">
        <location>
            <begin position="25"/>
            <end position="365"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77658.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="365" mass="39283" checksum="BF7B2E7995A8BECD" modified="2015-12-09" version="1">MTLRLFSAVTATLLALGIAGSAQAQPGRTAPVFDTWLVDCASTGACFSSSFTRNQSVWVDLRIVRDWRADAQPLLRLTTNTVLPQTGTLRFDVDGTTIESLPIEQLREIQAAVTSPPGFRPLGGEGFWYPTGAVTSTLLTALQTGQELTVHMPREGSAETVSVSIPLQGLKSGLLWLDNRQNRTGTASAIVSPGSEPPINAPHALPILAPEELPAEVSAIWHANRLCSSIDPTIFASLNAVRVPLEDGASLYIVPCGAPTAYNSPYVAIYAGKDGAARQVHVARMSESGPIATDLIYNARWVPADRQLISYFKGSGVGECGLWNRWVWNGTGLVLLEEASRKTCDNTEPDLSKWSNTWPLKNASK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARD8</accession>
    <name>A0A0M7ARD8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_05015</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000040">
        <property type="protein sequence ID" value="CTQ77688.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77688">
        <property type="protein sequence ID" value="CTQ77688"/>
        <property type="gene ID" value="LAX5112_05015"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ77688.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="30" mass="3384" checksum="AC3A3940E2FF489F" modified="2015-12-09" version="1">MIKLMREAVMTGFKEAMAMTQFSEAMAMTP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARR3</accession>
    <name>A0A0M7ARR3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Transport of quorum-sensing signal protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">tqsA_3</name>
        <name evidence="7" type="ORF">LAX5112_04967</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the autoinducer-2 exporter (AI-2E) (TC 2.A.86) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000037">
        <property type="protein sequence ID" value="CTQ77589.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674104.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000037.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77589">
        <property type="protein sequence ID" value="CTQ77589"/>
        <property type="gene ID" value="LAX5112_04967"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002549">
        <property type="entry name" value="AI-2E-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21716">
        <property type="entry name" value="PTHR21716"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01594">
        <property type="entry name" value="AI-2E_transport"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="5"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="29"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="61"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="135"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="201"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="234"/>
            <end position="254"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="261"/>
            <end position="279"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="299"/>
            <end position="324"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009773"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ77589.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="355" mass="38516" checksum="24429CF19E8DA552" modified="2015-12-09" version="1">MRSPLLTLTLTVFLISMVGWLLVVGRSLLLPFIIAIIVWYMINALSNVYRRIGYGNFHLPGFVAFPFALLTIFSVSTFVLDIVAVNLTQLAQDAPTYQRRLEELFTQAADLFHLNDPVELRDLFPDSVVPRMVTAGASVVTAIAGSASLVFIYVLFLLLEQSTFDRKFEKLFATPERAKAAFAIRAEINSSLMHYFTIKTAVSVATGVLTSLVLIAIGLPYAALFGFIAFVLNYIPTIGSLIGVIFPSLLAIVYYDTLGPFLIIATGLGLIQFSIGNLIEPRLMGANLNLSGLVIMLSLALWGAIWGVVGMVLCVPLTVMIVIVCSKIEAARPVAVLLSENGEIGDLPAATQPGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARX9</accession>
    <name>A0A0M7ARX9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Peptide chain release factor 1</fullName>
            <shortName evidence="5">RF-1</shortName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 7" type="primary">prfA</name>
        <name evidence="7" type="ORF">LAX5112_04825</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 5">Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="PTM">
        <text evidence="5">Methylated by PrmC. Methylation increases the termination efficiency of RF1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the prokaryotic/mitochondrial release factor family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000032">
        <property type="protein sequence ID" value="CTQ77176.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673982.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000032.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04825"/>
    <dbReference type="EnsemblBacteria" id="CTQ77176">
        <property type="protein sequence ID" value="CTQ77176"/>
        <property type="gene ID" value="LAX5112_04825"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016149">
        <property type="term" value="F:translation release factor activity, codon specific"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00093">
        <property type="entry name" value="Rel_fac_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005139">
        <property type="entry name" value="PCRF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000352">
        <property type="entry name" value="Pep_chain_release_fac_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045853">
        <property type="entry name" value="Pep_chain_release_fac_I_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004373">
        <property type="entry name" value="RF-1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03462">
        <property type="entry name" value="PCRF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00472">
        <property type="entry name" value="RF-1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00937">
        <property type="entry name" value="PCRF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75620">
        <property type="entry name" value="SSF75620"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00019">
        <property type="entry name" value="prfA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00745">
        <property type="entry name" value="RF_PROK_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 5" id="KW-0488">Methylation</keyword>
    <keyword evidence="4 5" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RF_PROK_I" evidence="6">
        <location>
            <begin position="226"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="modified residue" description="N5-methylglutamine" evidence="5">
        <location>
            <position position="233"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002986"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010835"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022481"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00093"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS00745"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ77176.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="357" mass="39686" checksum="9A951BF2DC551F96" modified="2015-12-09" version="1">MLARHKLDNLLDRFSELEHMMSANPDPASYVKLSREYAGLEPLVLKIRALVKAEEDLKGAEDLIEDPATDPEMRELAELERDELSENVERLTQDVRIGLLPKDEADTNDAILEVRAGTGGDEAALFAGDLFRMYQRYAELRGWKVEILSASEGEVGGFKEVIASVSGENVFARLKFESGVHRVQRVPATESGGRIHTSAATVAVLPQAENVDIDVQDSDLRIDTFRASGAGGQHVNTTDSAVRITHIPTGIVVAVQDERSQHKNKARAMQLLRARIYDEERERAASERTEARRLQVGSGDRSERIRTYNFPQGRVTDHRIGLTLYKLDQIIAGESLDEVIEALILDYQANLLASEEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASR7</accession>
    <name>A0A0M7ASR7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_05014</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000040">
        <property type="protein sequence ID" value="CTQ77687.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674137.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000040.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77687">
        <property type="protein sequence ID" value="CTQ77687"/>
        <property type="gene ID" value="LAX5112_05014"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77687.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="218" mass="23920" checksum="2995B047E2CC6D75" modified="2015-12-09" version="1">MIPQLSGGATQQLPRQQQSTSQEKAAARTERAEFGLDVKITASEGPLTLAVGEHALYTSEEWLEAKDDMNEASVALEMEKAYTFIRERLAEVEKMEPVPARELTGQEAATARDLFANADPFLVTETGQRSFRDGDTQYNFFPDGKVTVHQAGVPTSEEEKNFWLEDALKSLANLEKATGGLTLDELRANYEAASQRLDEIVDRAAATGTSGQIYDTVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ATA5</accession>
    <name>A0A0M7ATA5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Inner membrane ABC transporter permease protein YdcV</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ydcV_5</name>
        <name evidence="7" type="ORF">LAX5112_04780</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000030">
        <property type="protein sequence ID" value="CTQ77023.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451277.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000030.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04780"/>
    <dbReference type="EnsemblBacteria" id="CTQ77023">
        <property type="protein sequence ID" value="CTQ77023"/>
        <property type="gene ID" value="LAX5112_04780"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="21"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="84"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="115"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="151"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="200"/>
            <end position="226"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="246"/>
            <end position="271"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="80"/>
            <end position="268"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ77023.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="284" mass="31072" checksum="059F49FCDBDBC6A5" modified="2015-12-09" version="1">MSALPPYASPLQRTWFYTFRIFCGLIFFFLIFPILVILPLSFNAQDFFTFTKEMLALSPEGYSFKHYNDFFTNPDWQQALTNSVLIAPVATILATGFGTLAAIGLSQSHVPYKSAIMAILISPMIVPLIISAAGMYFFYSRIGLQGTYWGVVMAHAALGTPFVIITVTATLVGFDRSLVRAAASMGANPVTTFFKVQMPLIVPGVVSGALFAFITSFDEVVVVLFLGSAGQKTLPWQMFTGLREQISPTILAVASLMVAISIALLTVLELLRRRSERLRGLTPG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZMB5</accession>
    <name>A0A0M6ZMB5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Alanine--tRNA ligase</fullName>
            <ecNumber evidence="7">6.1.1.7</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">alaS_1</name>
        <name evidence="7" type="ORF">LAX5112_00113</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the class-II aminoacyl-tRNA synthetase family.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.7" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63915.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670146.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00113"/>
    <dbReference type="EnsemblBacteria" id="CTQ63915">
        <property type="protein sequence ID" value="CTQ63915"/>
        <property type="gene ID" value="LAX5112_00113"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004813">
        <property type="term" value="F:alanine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006419">
        <property type="term" value="P:alanyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018165">
        <property type="entry name" value="Ala-tRNA-synth_IIc_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018164">
        <property type="entry name" value="Ala-tRNA-synth_IIc_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018163">
        <property type="entry name" value="Thr/Ala-tRNA-synth_IIc_edit"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009000">
        <property type="entry name" value="Transl_B-barrel_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012947">
        <property type="entry name" value="tRNA_SAD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01411">
        <property type="entry name" value="tRNA-synt_2c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07973">
        <property type="entry name" value="tRNA_SAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00863">
        <property type="entry name" value="tRNA_SAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50447">
        <property type="entry name" value="SSF50447"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55186">
        <property type="entry name" value="SSF55186"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50860">
        <property type="entry name" value="AA_TRNA_LIGASE_II_ALA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="2 7" id="KW-0436">Ligase</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="AA_TRNA_LIGASE_II_ALA" evidence="6">
        <location>
            <begin position="1"/>
            <end position="238"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008226"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50860"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ63915.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="238" mass="25955" checksum="6DD8F0FF83A49AF2" modified="2015-12-09" version="1">MTTPLFRDDAYLRSCEADVVVVNERGGIVLDRTVFYATGGGQPGDTGYLELEDGTRIDIATTVYDADKKTIVHVPAEEQTLPTPGTKLTAHIDWARRYRLMRMHTALHLLSVALPFPVTGGQIGDGEGRLDFDMGETALDKEKVAAALNELAGGDHDVASEWITDEELDANPGLVKTMSVQPPRGAGRVRLVRIGRDIDLQPCGGTHVSRTSEIGPLELGKSEKKGKQNRRVRIRLAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZNV2</accession>
    <name>A0A0M6ZNV2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">CENP-V/GFA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_00112</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the Gfa family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63912.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670145.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ63912">
        <property type="protein sequence ID" value="CTQ63912"/>
        <property type="gene ID" value="LAX5112_00112"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016846">
        <property type="term" value="F:carbon-sulfur lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006913">
        <property type="entry name" value="CENP-V/GFA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011057">
        <property type="entry name" value="Mss4-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04828">
        <property type="entry name" value="GFA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51316">
        <property type="entry name" value="SSF51316"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51891">
        <property type="entry name" value="CENP_V_GFA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CENP-V/GFA" evidence="3">
        <location>
            <begin position="3"/>
            <end position="150"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005495"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51891"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ63912.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="162" mass="18262" checksum="4334AD9F4015B174" modified="2015-12-09" version="1">MKLSGSCHCGAIHFDVESKTPYPYMRCYCSVCRKTTGAGGYAINLMGDAGSLQIHDPHKVRKIYQAEFETGLSPAERSFCGQCGSHLWLWDPRWPELVHPLAAAIDTPLPKPPETVHILLESKPDWVDVAEGPDQGHFQEYPELSIEDWHKRHGLYENKDTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRM8</accession>
    <name>A0A0M6ZRM8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Glyoxalase-like_dom domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00204</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64174.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670205.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00204"/>
    <dbReference type="EnsemblBacteria" id="CTQ64174">
        <property type="protein sequence ID" value="CTQ64174"/>
        <property type="gene ID" value="LAX5112_00204"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.180.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029068">
        <property type="entry name" value="Glyas_Bleomycin-R_OHBP_Dase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025870">
        <property type="entry name" value="Glyoxalase-like_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13468">
        <property type="entry name" value="Glyoxalase_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54593">
        <property type="entry name" value="SSF54593"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glyoxalase-like_dom" evidence="1">
        <location>
            <begin position="5"/>
            <end position="190"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13468"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64174.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="274" mass="30016" checksum="60826F5F1347FA22" modified="2015-12-09" version="1">MVRGLDHVVMPVHDLEAAAAAFERLGFTASPENRHSWGTANRLIQLDGFFIEILSIADDSLITETQGSTFSFGGFNRAFLKKREGASMLVLDSVDPKIDRSDFERAGLQLYDPFSFERVANRPDGTTAQVGFDLTVVGDPESPEIGYFTCYNRFPENFWQPALQNHANGAQTVKAVYMLAKDPSDHHEFLGGFTGQREMRATSLGLELETARGQVVVLNPRAYRSLIGDKAADAVSGDLPQIAAFEVGCKGLKTRQVVPANDLFGLTLILSPTD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSB8</accession>
    <name>A0A0M6ZSB8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">D-hydantoinase/dihydropyrimidinase</fullName>
            <ecNumber evidence="4">3.5.2.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">dht</name>
        <name evidence="4" type="ORF">LAX5112_00256</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="PTM">
        <text evidence="2">Carbamylation allows a single lysine to coordinate two divalent metal cations.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the metallo-dependent hydrolases superfamily. Hydantoinase/dihydropyrimidinase family.</text>
    </comment>
    <dbReference type="EC" id="3.5.2.2" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64323.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670240.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00256"/>
    <dbReference type="EnsemblBacteria" id="CTQ64323">
        <property type="protein sequence ID" value="CTQ64323"/>
        <property type="gene ID" value="LAX5112_00256"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004157">
        <property type="term" value="F:dihydropyrimidinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd01314">
        <property type="entry name" value="D-HYD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006680">
        <property type="entry name" value="Amidohydro-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011778">
        <property type="entry name" value="Hydantoinase/dihydroPyrase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011059">
        <property type="entry name" value="Metal-dep_hydrolase_composite"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032466">
        <property type="entry name" value="Metal_Hydrolase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01979">
        <property type="entry name" value="Amidohydro_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51338">
        <property type="entry name" value="SSF51338"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51556">
        <property type="entry name" value="SSF51556"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02033">
        <property type="entry name" value="D-hydantoinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Amidohydro-rel" evidence="3">
        <location>
            <begin position="48"/>
            <end position="419"/>
        </location>
    </feature>
    <feature type="modified residue" description="N6-carboxylysine" evidence="2">
        <location>
            <position position="148"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR611778-50"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01979"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ64323.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="485" mass="52884" checksum="31F283D6534A732C" modified="2015-12-09" version="1">MASKVIKGGTVVTADLSYEADVKIEGGKIVEIGPNLSGDETLDAAGCYVMPGGIDPHTHLEMPFMGTFSSDNFDSGTRAALAGGTTMVVDFALPSPGQGLMEALQMWDNKSTMAHCDYSFHMAITWWGEQVFDEMETVVREKGINTFKHFMAYKGALMVNDDEMFASFQRCAELGALPLVHAENGDVVATLQQKLLAEGNNGPEAHAYSRPPEVEGEATNRAIMIADMAGVPVYIVHTSSEQAHEAIRRARQNGIRAYGEPLIQHLTLDDSEYKHSDWDHAARRVMSPPFRDKKHQDSLWAGLASGSLQVVATDHCAFTTDQKRTGIGDFTQIPNGTGGLEDRMPMLWTYGVGTGRLTPNEFVAVTSTNIAKILNIYPKKGAILVGADADIVVWDPEKEKTISASNQQSAIDYNVFEGKHVKGLPRYTLTRGRVAVEDGTVNPQQGHGEFVKREPFQAVNKALSTWKELTAPRKVERTGIPASGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSG0</accession>
    <name>A0A0M6ZSG0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Pyruvate dehydrogenase E1 component subunit beta</fullName>
            <ecNumber evidence="2">1.2.4.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">pdhB</name>
        <name evidence="2" type="ORF">LAX5112_00486</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.2.4.1" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65030.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670437.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00486"/>
    <dbReference type="EnsemblBacteria" id="CTQ65030">
        <property type="protein sequence ID" value="CTQ65030"/>
        <property type="gene ID" value="LAX5112_00486"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004739">
        <property type="term" value="F:pyruvate dehydrogenase (acetyl-transferring) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.920">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029061">
        <property type="entry name" value="THDP-binding"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009014">
        <property type="entry name" value="Transketo_C/PFOR_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005475">
        <property type="entry name" value="Transketolase-like_Pyr-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033248">
        <property type="entry name" value="Transketolase_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02779">
        <property type="entry name" value="Transket_pyr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02780">
        <property type="entry name" value="Transketolase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00861">
        <property type="entry name" value="Transket_pyr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52518">
        <property type="entry name" value="SSF52518"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52922">
        <property type="entry name" value="SSF52922"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Transket_pyr" evidence="1">
        <location>
            <begin position="5"/>
            <end position="180"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00861"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65030.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="332" mass="35859" checksum="0BE4B5B035724ADD" modified="2015-12-09" version="1">MTREITLSKAVNEAIAEEMRRDPTVFLLGEDVAEAGTPFKVLSGLVEEFGTGRVIDTPISEPGFMGMAVGAAMTGSRPIVDLMFGDFIYLVMDQLCNQAAKTHYMSGGKLKVPLVLRTNMGATRRSAAQHSQSLQAIVAHIPGLKVAMPSSAYEAKGLLKTAIRDDNPVVIFEDKLMYQDKALVPEEEYLIPFGQANVKREGRDITLVATSSMVQVAEEAADTLAKDGISAEIIDPRTIVPLDEETILYSVRKTSRAIVIDEGHQSYGVTAEIAARISEKAFYHLDAPVIRMGAMDVPVPFSPALEDLTVPTAAGVADNARKICRGELLHAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSL1</accession>
    <name>A0A0M6ZSL1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7 9">Purine nucleoside phosphorylase</fullName>
            <ecNumber evidence="6 9">2.4.2.1</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8 9">Inosine-guanosine phosphorylase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="12" type="primary">xapA</name>
        <name evidence="12" type="ORF">LAX5112_00562</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta-(deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. Cleaves guanosine, inosine, 2'-deoxyguanosine and 2'-deoxyinosine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>a purine 2'-deoxy-D-ribonucleoside + phosphate = 2-deoxy-alpha-D-ribose 1-phosphate + a purine nucleobase</text>
            <dbReference type="Rhea" id="RHEA:36431"/>
            <dbReference type="ChEBI" id="CHEBI:26386"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57259"/>
            <dbReference type="ChEBI" id="CHEBI:142361"/>
            <dbReference type="EC" id="2.4.2.1"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3 9">Purine metabolism; purine nucleoside salvage.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Homotrimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4 9">Belongs to the PNP/MTAP phosphorylase family.</text>
    </comment>
    <dbReference type="EC" id="2.4.2.1" evidence="6 9"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65252.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670497.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00562"/>
    <dbReference type="EnsemblBacteria" id="CTQ65252">
        <property type="protein sequence ID" value="CTQ65252"/>
        <property type="gene ID" value="LAX5112_00562"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00606"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004731">
        <property type="term" value="F:purine-nucleoside phosphorylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009116">
        <property type="term" value="P:nucleoside metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd09009">
        <property type="entry name" value="PNP-EcPNPII_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1580">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000845">
        <property type="entry name" value="Nucleoside_phosphorylase_d"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035994">
        <property type="entry name" value="Nucleoside_phosphorylase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011269">
        <property type="entry name" value="PUNP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011268">
        <property type="entry name" value="Purine_phosphorylase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11904">
        <property type="entry name" value="PTHR11904"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01048">
        <property type="entry name" value="PNP_UDP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000477">
        <property type="entry name" value="PurNPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53167">
        <property type="entry name" value="SSF53167"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01697">
        <property type="entry name" value="PNPH-PUNA-XAPA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01698">
        <property type="entry name" value="PUNP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 12" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9 12" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PNP_UDP_1" evidence="11">
        <location>
            <begin position="21"/>
            <end position="265"/>
        </location>
    </feature>
    <feature type="region of interest" description="Phosphate binding" evidence="10">
        <location>
            <begin position="79"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="28"/>
        </location>
        <ligand>
            <name>phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="59"/>
        </location>
        <ligand>
            <name>phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="111"/>
        </location>
        <ligand>
            <name>phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="188"/>
        </location>
        <ligand>
            <name>a purine D-ribonucleoside</name>
            <dbReference type="ChEBI" id="CHEBI:142355"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="207"/>
        </location>
        <ligand>
            <name>phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="230"/>
        </location>
        <ligand>
            <name>a purine D-ribonucleoside</name>
            <dbReference type="ChEBI" id="CHEBI:142355"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001173"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00002678"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005058"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00006751"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00011233"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00011886"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00013834"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00031036"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRNR" id="PIRNR000477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR000477-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF01048"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ65252.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="269" mass="28924" checksum="D853EDEEF1AB00A8" modified="2015-12-09" version="1">MSGYGRECADIVRAAREGSYKIGMILGSGLGTLAEEVEDAVRIPYAHLTEFPVSTVTSHSSELVAGTLAGVPVVILSGRAHYYEGGDPTVMRTPVETLKELGCEILLATNAAGSLREEVPPGSPMVISDHINWSGKNPLIGEEDEKRFLDMSAAYDQELREAMKKVAEETGDPVAEGVYMWFSGPSFETPAEIRLAKMLGADAVGMSTVPEVIMARFLGMRVAALSIITNYGAGMQTHALSHDETKSVALTGMERMKQLVRAFVKEVGQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZT78</accession>
    <name>A0A0M6ZT78_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">HAMP domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_00345</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64633.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670336.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00345"/>
    <dbReference type="EnsemblBacteria" id="CTQ64633">
        <property type="protein sequence ID" value="CTQ64633"/>
        <property type="gene ID" value="LAX5112_00345"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="41"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="307"/>
            <end position="327"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ64633.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="388" mass="41956" checksum="C9DAC15DDAC6D473" modified="2015-12-09" version="1">MDEEKRPAKDISAPGNASPAHSQHGAAIHSRQNRKPFRIPVGVALGLVFSLLLVAICGLIIAYMAAADRRIAGRLLDQQAAAILNANQAVLDKFFSEQDVLLRTIAVHAAAMQRHLNGADLEAFKALLPENAEFELGRSVMDDAPADALPDVAWPAFEWREGQAEAAKTAELDLGNGQRLFVHYPRAVFLDVARDMTWDSRQQVFLLSGRNNVIVVHGLQGVDYSATPETPLPLLKQMTETPLHQIWDAGQQAHIIDGQISGRLFPASGGVYTAIYTELDTGPADGWIIGTLYRADQFGEALDQTQVVLYAALAALVAGAALSFVVGRKLGRPLARLAEAAADLRKLEFHEEHRLPSSPLAELNDVNQAFNGSIGLSTPLPNTCRVSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZT89</accession>
    <name>A0A0M6ZT89_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">C4-dicarboxylate-binding periplasmic protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">dctP_2</name>
        <name evidence="4" type="ORF">LAX5112_00806</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the bacterial solute-binding protein 7 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65928.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670720.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00806"/>
    <dbReference type="EnsemblBacteria" id="CTQ65928">
        <property type="protein sequence ID" value="CTQ65928"/>
        <property type="gene ID" value="LAX5112_00806"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071702">
        <property type="term" value="P:organic substance transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.190.170">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018389">
        <property type="entry name" value="DctP_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038404">
        <property type="entry name" value="TRAP_DctP_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33376">
        <property type="entry name" value="PTHR33376"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03480">
        <property type="entry name" value="DctP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005808948" evidence="3">
        <location>
            <begin position="26"/>
            <end position="361"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ65928.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="361" mass="39168" checksum="50272BBFC539C6E7" modified="2015-12-09" version="1">MIGKLTRRSVIALAALSATAMPSFATETIKAVVIDGYPARAMWVKEFTNFFIPEVDKRLADKGNYKIDWQESYGGSIVKPKGVLEGVKLGLGDIGIVTTIFHSSKLPSQALSAVTPFIAPDARAVAKAVDEIAKEYPTMQKEFEAQNQVYLATGVVLDTYQVFSKEPINSLSDLSGSKVAGAGMNLRYLEGLDNAAGVRGGLTDFYNMLQTGLVDNAMLWPEAAKTFKIAEVAPYMLKADLGAVNSKTITVNKDYWDKLPDEVKEVLQDVAVAYRDHVAGVAMDRAEASRNAYVESGGTIVEMDPAERAQWAANMPNIAVEWAADLDTKGEPGSDMLKSYTAKLKEAGHSPVRDWSAELTQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTL9</accession>
    <name>A0A0M6ZTL9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Biopolymer transport protein ExbD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">LAX5112_00692</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cell membrane</location>
            <topology evidence="6">Single-pass type II membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the ExbD/TolR family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65602.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670634.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00692"/>
    <dbReference type="EnsemblBacteria" id="CTQ65602">
        <property type="protein sequence ID" value="CTQ65602"/>
        <property type="gene ID" value="LAX5112_00692"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015031">
        <property type="term" value="P:protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003400">
        <property type="entry name" value="ExbD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30558">
        <property type="entry name" value="PTHR30558"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02472">
        <property type="entry name" value="ExbD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0653">Protein transport</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005811"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003879"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ65602.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="128" mass="13568" checksum="7A87969D68CCA914" modified="2015-12-09" version="1">MRVEPLPKKHRAISLTPLVDVIFLLLLFFMLSSTFTQFGQVEIGAPAAAGGSETLPKAILMVEADRLRLNGTVVVQDDLAAEVSALTETGNDSLLVYIKGSSSTQRLVTVLSDLKSVSGLNVTVAGPK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTU9</accession>
    <name>A0A0M6ZTU9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative hydroxypyruvate reductase</fullName>
            <ecNumber evidence="3">1.1.1.81</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ttuD</name>
        <name evidence="3" type="ORF">LAX5112_00908</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.1.1.81" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66205.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670793.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00908"/>
    <dbReference type="EnsemblBacteria" id="CTQ66205">
        <property type="protein sequence ID" value="CTQ66205"/>
        <property type="gene ID" value="LAX5112_00908"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008887">
        <property type="term" value="F:glycerate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016618">
        <property type="term" value="F:hydroxypyruvate reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1480.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10180">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037035">
        <property type="entry name" value="GK-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038614">
        <property type="entry name" value="GK_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007835">
        <property type="entry name" value="MOFRL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025286">
        <property type="entry name" value="MOFRL_assoc_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039760">
        <property type="entry name" value="MOFRL_protein"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12227">
        <property type="entry name" value="PTHR12227"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13660">
        <property type="entry name" value="DUF4147"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05161">
        <property type="entry name" value="MOFRL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF4147" evidence="2">
        <location>
            <begin position="9"/>
            <end position="227"/>
        </location>
    </feature>
    <feature type="domain" description="MOFRL" evidence="1">
        <location>
            <begin position="307"/>
            <end position="411"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF05161"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13660"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ66205.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="420" mass="43171" checksum="EF4DB2C7F00D4CB6" modified="2015-12-09" version="1">MAANPQELLRALFERAVEVADPMKSLASQLPDKPDGRVVVIGAGKASARMAEAVEAEWGACEGLVITRYGYGRPTRGIEIVEAAHPVPDKAGQDATKRMLELLSDLDGNDFVLALISGGASALLTAPAGAISLEEKQAVNQALLASGAPIGQMNVVRKHLSWVKGGQLAAAAYPAKMVAMLLSDVPGDDPAEIGSGPTVGDGSTPEDARQILARWNIEVPVSVSEVLSGKTGVLPPDHESLGRVTNTIFAAPSQSLEAASSLAEKAGCDVEILGDALEGEARDVAATHADLALQRQKERGASERPLILLSGGELTVTRRGDGIGGPNAEYALALANSLTGAAGVHAIACDTDGVDGAAEVAGAIIGPDTPSRAAATGVSMSDALERNDAHEFFRAIGDQVVTGPTLTNVNDFRAIYIDGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUH0</accession>
    <name>A0A0M6ZUH0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Putative S-adenosylmethionine-dependent methyltransferase/MSMEI_2290</fullName>
            <ecNumber evidence="1">2.1.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00969</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.1.1.-" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66439.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ66439">
        <property type="protein sequence ID" value="CTQ66439"/>
        <property type="gene ID" value="LAX5112_00969"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ66439.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="292" mass="32158" checksum="8988525343A167C9" modified="2015-12-09" version="1">MTSIYDTLAELGVASKETQEVFATRTRDREDVIVYRDQLSGVIYIDGFYGGDEVYQEGDYRQSNEALIGKRDYEVTVDASRRVEAYRPFVTGKHIVEFGCGDGAFLHSVCNEAQSCCGVELQEDYVTALNAGGILCHKSLSALPDSSMDSALSFHVLEHLPEPAPILQELFRVLKPGGVMVAEVPHAGDVLLNQLNCDEFKAFTLWSQHLVLHTRDSLKRLLAASGFAEIVIEGVQRYPLSNHLGWLSKGRPGGHKSTLAAIDTSDLRISYEAALNRIDATDTLVAIVRKPV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUH7</accession>
    <name>A0A0M6ZUH7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Ribose operon repressor</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">rbsR</name>
        <name evidence="5" type="ORF">LAX5112_00783</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65861.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670703.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00783"/>
    <dbReference type="EnsemblBacteria" id="CTQ65861">
        <property type="protein sequence ID" value="CTQ65861"/>
        <property type="gene ID" value="LAX5112_00783"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01392">
        <property type="entry name" value="HTH_LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000843">
        <property type="entry name" value="HTH_LacI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046335">
        <property type="entry name" value="LacI/GalR-like_sensor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00356">
        <property type="entry name" value="LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13377">
        <property type="entry name" value="Peripla_BP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00354">
        <property type="entry name" value="HTH_LACI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50932">
        <property type="entry name" value="HTH_LACI_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH lacI-type" evidence="4">
        <location>
            <begin position="2"/>
            <end position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ65861.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="332" mass="36024" checksum="BB737A31D9BDFADF" modified="2015-12-09" version="1">MPTIKDVARKADVSVGTVSRVLAKNDTVKQPLKLRVQAAMDELGYKPNLAARALRTNSIDVIGLVVPDITKPFFAQLAKDIEKEAASRSHSVMLANSDDDLETEKIQIAALLDRSVRGVIVVATSDSNHPYEADVPIVSLDRRLGDHALVSTNHFDGSGQIADHLHKLGHRRIAYIAGPDTMDVARRRREGFVTRIKTLSRPDDPIKLTIHAGQFDYDSGEEVCRKILAETADSDDRPTAIAAASDQQAIGVLRAARDLKLDVPGDLSVTGFDDISLAALVVPRLTTIRQPTAALARSVIDRIFEPAKATGDEEISGDLVMRESTAALDRSD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVX1</accession>
    <name>A0A0M6ZVX1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01149</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66939.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01149"/>
    <dbReference type="EnsemblBacteria" id="CTQ66939">
        <property type="protein sequence ID" value="CTQ66939"/>
        <property type="gene ID" value="LAX5112_01149"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ66939.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="171" mass="19299" checksum="C214D142D2847BFA" modified="2015-12-09" version="1">MSYSNASGAGETPMIEIDLDVRDFSSNWANCDLVSSYVSRMVCHNRLDSMLFANLYSSALNELMETTFHRHGNNGKVVCRFKRRENGDRIEIDMPGSEDIARFYDDAVALTKRPDKDAIYLDRLFSAETPDKSLGLLELSVDYGAEFSLTRDQSNNRICLTADLVFEDKAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVX6</accession>
    <name>A0A0M6ZVX6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Adenylate cyclase 1</fullName>
            <ecNumber evidence="3">4.6.1.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">cyaA_4</name>
        <name evidence="3" type="ORF">LAX5112_00717</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="4.6.1.1" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65674.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670652.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00717"/>
    <dbReference type="EnsemblBacteria" id="CTQ65674">
        <property type="protein sequence ID" value="CTQ65674"/>
        <property type="gene ID" value="LAX5112_00717"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004016">
        <property type="term" value="F:adenylate cyclase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009190">
        <property type="term" value="P:cyclic nucleotide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035556">
        <property type="term" value="P:intracellular signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07302">
        <property type="entry name" value="CHD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1230">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001054">
        <property type="entry name" value="A/G_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007890">
        <property type="entry name" value="CHASE2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05226">
        <property type="entry name" value="CHASE2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00211">
        <property type="entry name" value="Guanylate_cyc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01080">
        <property type="entry name" value="CHASE2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00044">
        <property type="entry name" value="CYCc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50125">
        <property type="entry name" value="GUANYLATE_CYCLASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0456">Lyase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="287"/>
            <end position="308"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="313"/>
            <end position="332"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="338"/>
            <end position="359"/>
        </location>
    </feature>
    <feature type="domain" description="Guanylate cyclase" evidence="2">
        <location>
            <begin position="404"/>
            <end position="536"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ65674.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="650" mass="70017" checksum="9CE680A89DE65313" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZX13</accession>
    <name>A0A0M6ZX13_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">SOUL heme-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01019</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66580.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ66580">
        <property type="protein sequence ID" value="CTQ66580"/>
        <property type="gene ID" value="LAX5112_01019"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0110165">
        <property type="term" value="C:cellular anatomical entity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.80.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011256">
        <property type="entry name" value="Reg_factor_effector_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006917">
        <property type="entry name" value="SOUL_haem-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11220">
        <property type="entry name" value="PTHR11220"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04832">
        <property type="entry name" value="SOUL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55136">
        <property type="entry name" value="SSF55136"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ66580.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="220" mass="24291" checksum="98BCF8E2BF14E350" modified="2015-12-09" version="1">MMHTPQSFLRRKPGWLGVTGSAVVALLAILSSAAAALEQPSYKVLSADGPIEIRQYKDMAAAEVTVAGDRSAATRKAFRILFRYISGDNQGSNKIEMTAPVRQQAAPAEIAMTAPVTQKPVGNGEWRVAFYLPSEYTVRTAPQPDDNRIRIVNVKGKKVAAIRFSGIWTDRNFNRHLQTLEQHLSKNGLKVAGAPIFAYFNAPFTLPPFRRNEVQIPLSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZX70</accession>
    <name>A0A0M6ZX70_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01111</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66836.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ66836">
        <property type="protein sequence ID" value="CTQ66836"/>
        <property type="gene ID" value="LAX5112_01111"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ66836.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="75" mass="7852" checksum="2B12ED3F10DB99EC" modified="2015-12-09" version="1">MWTVALRPPCKALTKSASLALSRGHDIKTGIGSDARPGQLNAWCCPLASPAPNPYILSIHPSAFALPGLFLGARV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZY61</accession>
    <name>A0A0M6ZY61_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01280</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67231.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671112.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67231">
        <property type="protein sequence ID" value="CTQ67231"/>
        <property type="gene ID" value="LAX5112_01280"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="28"/>
            <end position="53"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67231.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="72" mass="7778" checksum="D508176681116728" modified="2015-12-09" version="1">MNKPFTPDPRVETLRDAITEANRFIRSATKAKDSLSSEPEGGNGNKAYAAAKRSSMDLTNALVAVRNPNGTR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYE0</accession>
    <name>A0A0M6ZYE0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Peptide-methionine (S)-S-oxide reductase</fullName>
            <ecNumber evidence="3">1.8.4.11</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">mrsA</name>
        <name evidence="6" type="ORF">LAX5112_01323</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>[thioredoxin]-disulfide + H2O + L-methionine = [thioredoxin]-dithiol + L-methionine (S)-S-oxide</text>
            <dbReference type="Rhea" id="RHEA:19993"/>
            <dbReference type="Rhea" id="RHEA-COMP:10698"/>
            <dbReference type="Rhea" id="RHEA-COMP:10700"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:50058"/>
            <dbReference type="ChEBI" id="CHEBI:57844"/>
            <dbReference type="ChEBI" id="CHEBI:58772"/>
            <dbReference type="EC" id="1.8.4.11"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>[thioredoxin]-disulfide + H2O + L-methionyl-[protein] = [thioredoxin]-dithiol + L-methionyl-(S)-S-oxide-[protein]</text>
            <dbReference type="Rhea" id="RHEA:14217"/>
            <dbReference type="Rhea" id="RHEA-COMP:10698"/>
            <dbReference type="Rhea" id="RHEA-COMP:10700"/>
            <dbReference type="Rhea" id="RHEA-COMP:12313"/>
            <dbReference type="Rhea" id="RHEA-COMP:12315"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16044"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:44120"/>
            <dbReference type="ChEBI" id="CHEBI:50058"/>
            <dbReference type="EC" id="1.8.4.11"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="1.8.4.11" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67311.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671143.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01323"/>
    <dbReference type="EnsemblBacteria" id="CTQ67311">
        <property type="protein sequence ID" value="CTQ67311"/>
        <property type="gene ID" value="LAX5112_01323"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033744">
        <property type="term" value="F:L-methionine:thioredoxin-disulfide S-oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008113">
        <property type="term" value="F:peptide-methionine (S)-S-oxide reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1060.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002569">
        <property type="entry name" value="Met_Sox_Rdtase_MsrA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036509">
        <property type="entry name" value="Met_Sox_Rdtase_MsrA_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01625">
        <property type="entry name" value="PMSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55068">
        <property type="entry name" value="SSF55068"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PMSR" evidence="5">
        <location>
            <begin position="5"/>
            <end position="138"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001063"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001497"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012502"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF01625"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ67311.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="165" mass="18612" checksum="8C7AC65EC0B2A211" modified="2015-12-09" version="1">MKLGLGGGCHWCTEAVFQTLAGISNVEQGFVRSDPPNHAWSEAVLVTFDPVALPMEVLIEVHLRTHSATSHHKMRGKYRSAVYTYDAGTGVRVAQILHDLQKHFEEPLVTKVLTLSAFKPSDERFQNYYLNGPERPFCKTYIDPKLNLLRRDYAAILRKNGEAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYN3</accession>
    <name>A0A0M6ZYN3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01235</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67150.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671073.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67150">
        <property type="protein sequence ID" value="CTQ67150"/>
        <property type="gene ID" value="LAX5112_01235"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67150.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="89" mass="9199" checksum="9F9F2B10153A97A6" modified="2015-12-09" version="1">MTDQTAVPVTDQAWVEVADGSEFVTIATQSLGGFLAMVATVQPPTEQDTGAAFYGKAGSPVSYSNLLTTDKVWVRAAVASMTVAVAKSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYN6</accession>
    <name>A0A0M6ZYN6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01377</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67411.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671181.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01377"/>
    <dbReference type="EnsemblBacteria" id="CTQ67411">
        <property type="protein sequence ID" value="CTQ67411"/>
        <property type="gene ID" value="LAX5112_01377"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021251">
        <property type="entry name" value="DUF2793"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10983">
        <property type="entry name" value="DUF2793"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67411.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="241" mass="24734" checksum="C8B45EA798DEEEDE" modified="2015-12-09" version="1">MSETLRLALPLLAAAQAQKHVTHNEALLTLDALSQPVVQSRGLTAPPAANEGDLYLVAPGASGDWAGRDGELAEWRNGAWAFHAPFEGLAIHVLAEGLDLKYLAGTWRDMGGPLSETRILARGSFGAQSEHRVIEAELSALSGAFVETGLIIPSRAIVFCVSTRTVTAVTGASSYDCGLSGETSKFGGSLGIAAGSSNLGVIGPTAFYAGTALRLTANGGAFSGGTVRLAVHCFFPVAPAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYU7</accession>
    <name>A0A0M6ZYU7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Surface antigen</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01364</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67386.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671172.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01364"/>
    <dbReference type="EnsemblBacteria" id="CTQ67386">
        <property type="protein sequence ID" value="CTQ67386"/>
        <property type="gene ID" value="LAX5112_01364"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032635">
        <property type="entry name" value="Anti_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016364">
        <property type="entry name" value="Surface_antigen_Rickettsia"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16998">
        <property type="entry name" value="17kDa_Anti_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002721">
        <property type="entry name" value="Surface_antigen_Rickettsia"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809195" evidence="1">
        <location>
            <begin position="24"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="domain" description="17kDa_Anti_2" evidence="2">
        <location>
            <begin position="44"/>
            <end position="143"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF16998"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ67386.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="145" mass="15238" checksum="2E961A84BA444564" modified="2015-12-09" version="1">MNLRSALCLLTATLLGGCSIASGANGVGGWGSSFGDPRGSVSGTEASAAISVLVNNEFGEALEPSDRRAAEQAQDRALRARGVGVSVAWQNDRTGRSGRVLPGPVYSVNETECREFTHEMVLQGRVLQARGTACEMNRGDWKVIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZ52</accession>
    <name>A0A0M6ZZ52_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Aspartate racemase</fullName>
            <ecNumber evidence="2">5.1.1.13</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01638</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the aspartate/glutamate racemases family.</text>
    </comment>
    <dbReference type="EC" id="5.1.1.13" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68108.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01638"/>
    <dbReference type="EnsemblBacteria" id="CTQ68108">
        <property type="protein sequence ID" value="CTQ68108"/>
        <property type="gene ID" value="LAX5112_01638"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047689">
        <property type="term" value="F:aspartate racemase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006807">
        <property type="term" value="P:nitrogen compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015942">
        <property type="entry name" value="Asp/Glu/hydantoin_racemase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001920">
        <property type="entry name" value="Asp/Glu_race"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033134">
        <property type="entry name" value="Asp/Glu_racemase_AS_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004380">
        <property type="entry name" value="Asp_race"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21198:SF7">
        <property type="entry name" value="PTHR21198:SF7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01177">
        <property type="entry name" value="Asp_Glu_race"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53681">
        <property type="entry name" value="SSF53681"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00035">
        <property type="entry name" value="asp_race"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00924">
        <property type="entry name" value="ASP_GLU_RACEMASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0413">Isomerase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007847"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68108.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="221" mass="24132" checksum="84DBC3B41F1EA1F0" modified="2015-12-09" version="1">MSWESTVTYYQLLNRMTRDRLGGLHSAKCLLWSFDFADVAKSQSDGDWARATRLMIDAAQNLERGGAECLVICTNTMHKMAGEVQAAVDIPLIHIADATAPAIKSAGSTAPLLLATAYTMEQDFYKGHLRDQHGIEVRIPEADDRAAVHRIIYEELCQGEVLDRSKTRYLDVVDRAVAAGADGVIFGCTEIGLLVSEVDFRVPAFNTTTLHAEAAVSFALG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0G0</accession>
    <name>A0A0M7A0G0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Propionyl-CoA carboxylase</fullName>
            <ecNumber evidence="4">6.4.1.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="primary">accA1_1</name>
        <name evidence="15" type="ORF">LAX5112_01773</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + hydrogencarbonate + propanoyl-CoA = (S)-methylmalonyl-CoA + ADP + H(+) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:23720"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17544"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57327"/>
            <dbReference type="ChEBI" id="CHEBI:57392"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.4.1.3"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="1">
            <dbReference type="Rhea" id="RHEA:23721"/>
        </physiologicalReaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>biotin</name>
            <dbReference type="ChEBI" id="CHEBI:57586"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="3">Metabolic intermediate metabolism; propanoyl-CoA degradation; succinyl-CoA from propanoyl-CoA: step 1/3.</text>
    </comment>
    <dbReference type="EC" id="6.4.1.3" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68528.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671500.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01773"/>
    <dbReference type="EnsemblBacteria" id="CTQ68528">
        <property type="protein sequence ID" value="CTQ68528"/>
        <property type="gene ID" value="LAX5112_01773"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00945">
        <property type="reaction ID" value="UER00908"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004658">
        <property type="term" value="F:propionyl-CoA carboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016042">
        <property type="term" value="P:lipid catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011761">
        <property type="entry name" value="ATP-grasp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005481">
        <property type="entry name" value="BC-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001882">
        <property type="entry name" value="Biotin_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011764">
        <property type="entry name" value="Biotin_carboxylation_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005482">
        <property type="entry name" value="Biotin_COase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000089">
        <property type="entry name" value="Biotin_lipoyl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005479">
        <property type="entry name" value="CbamoylP_synth_lsu-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041265">
        <property type="entry name" value="PCC_BT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016185">
        <property type="entry name" value="PreATP-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011054">
        <property type="entry name" value="Rudment_hybrid_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011053">
        <property type="entry name" value="Single_hybrid_motif"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02785">
        <property type="entry name" value="Biotin_carb_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00289">
        <property type="entry name" value="Biotin_carb_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00364">
        <property type="entry name" value="Biotin_lipoyl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02786">
        <property type="entry name" value="CPSase_L_D2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18140">
        <property type="entry name" value="PCC_BT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00878">
        <property type="entry name" value="Biotin_carb_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51230">
        <property type="entry name" value="SSF51230"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51246">
        <property type="entry name" value="SSF51246"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52440">
        <property type="entry name" value="SSF52440"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50975">
        <property type="entry name" value="ATP_GRASP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50979">
        <property type="entry name" value="BC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00188">
        <property type="entry name" value="BIOTIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50968">
        <property type="entry name" value="BIOTINYL_LIPOYL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00866">
        <property type="entry name" value="CPSASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00867">
        <property type="entry name" value="CPSASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7 11" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="10" id="KW-0092">Biotin</keyword>
    <keyword evidence="5" id="KW-0436">Ligase</keyword>
    <keyword evidence="9" id="KW-0442">Lipid degradation</keyword>
    <keyword evidence="9" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="8" id="KW-0460">Magnesium</keyword>
    <keyword evidence="6 11" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Biotin carboxylation" evidence="14">
        <location>
            <begin position="1"/>
            <end position="451"/>
        </location>
    </feature>
    <feature type="domain" description="ATP-grasp" evidence="13">
        <location>
            <begin position="120"/>
            <end position="317"/>
        </location>
    </feature>
    <feature type="domain" description="Lipoyl-binding" evidence="12">
        <location>
            <begin position="591"/>
            <end position="670"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000634"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001953"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005060"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00013050"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022963"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023267"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00409"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS50975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS50979"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="CTQ68528.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="670" mass="73245" checksum="441C286F8C0EBA51" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0H5</accession>
    <name>A0A0M7A0H5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Putative ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">LAX5112_01314</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67294.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01314"/>
    <dbReference type="EnsemblBacteria" id="CTQ67294">
        <property type="protein sequence ID" value="CTQ67294"/>
        <property type="gene ID" value="LAX5112_01314"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1560.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011527">
        <property type="entry name" value="ABC1_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036640">
        <property type="entry name" value="ABC1_TM_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00664">
        <property type="entry name" value="ABC_membrane"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90123">
        <property type="entry name" value="SSF90123"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50929">
        <property type="entry name" value="ABC_TM1F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="28"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="75"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="276"/>
            <end position="303"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="7">
        <location>
            <begin position="49"/>
            <end position="322"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="6">
        <location>
            <begin position="357"/>
            <end position="615"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ67294.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="871" mass="97339" checksum="F541F20A4F7D3596" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0K5</accession>
    <name>A0A0M7A0K5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">HTH-type transcriptional regulator YofA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yofA_2</name>
        <name evidence="3" type="ORF">LAX5112_01330</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67324.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01330"/>
    <dbReference type="EnsemblBacteria" id="CTQ67324">
        <property type="protein sequence ID" value="CTQ67324"/>
        <property type="gene ID" value="LAX5112_01330"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00039">
        <property type="entry name" value="HTHLYSR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="114"/>
            <end position="171"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ67324.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="409" mass="45306" checksum="2B1843BF4598C48A" modified="2015-12-09" version="1">MHIGEIGVVDPCFCCIRVRKRQKRGDIGCVSSGLKDDRFRINRYQSATMSGEGRRGLFAIGAKEFPVSDCDHGKGVRGHEKVSVDCDTHNIRSIGHDKNSSIADVSCAKMHTMEKWDDLKFVLAIAKAGNITKAARGLKVTHSTVSRRLASLEAELGTRLFERIPEGFLPTVAGQEALNVAGRVEREMLALDTSITAQDAELEGPLRITAPQLMFQVQLADIMKAFAEKHPRIQMEMIAANEILSLHRREADVAVRVTNRPDEALFGRLATRQKRTYYISRDHARQLGDSLAANPSNAEIGCLVFKWASQSVPKRILARFPNAYVSVMADDMIAAHAAARAGLGIVNMPCFLGDPDPDLMRVPGLEPEHYLDIWLLTHPELKNVARIRTFMRFAADAFAKKSHFYAGSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0S5</accession>
    <name>A0A0M7A0S5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Lysozyme M1</fullName>
            <ecNumber evidence="5">3.2.1.17</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">acm_1</name>
        <name evidence="5" type="ORF">LAX5112_01801</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the glycosyl hydrolase 25 family.</text>
    </comment>
    <dbReference type="EC" id="3.2.1.17" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68595.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671666.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01801"/>
    <dbReference type="EnsemblBacteria" id="CTQ68595">
        <property type="protein sequence ID" value="CTQ68595"/>
        <property type="gene ID" value="LAX5112_01801"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003796">
        <property type="term" value="F:lysozyme activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016998">
        <property type="term" value="P:cell wall macromolecule catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009253">
        <property type="term" value="P:peptidoglycan catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002053">
        <property type="entry name" value="Glyco_hydro_25"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018077">
        <property type="entry name" value="Glyco_hydro_fam25_subgr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01183">
        <property type="entry name" value="Glyco_hydro_25"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00641">
        <property type="entry name" value="Glyco_25"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51904">
        <property type="entry name" value="GLYCOSYL_HYDROL_F25_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="2 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010646"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ68595.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="236" mass="26355" checksum="FDCFD940925D90AD" modified="2015-12-09" version="1">MKFLQAVLRALFYIAVGGVISIAGAAYFFMNWEPDRDDFPVRGIDVSHHQGDIDWAKVASDDVAFAYIKASEGGDFRDRAFAANWQAASAASLPTGAYHFFSLCKDGASQARNFLAVLPDEPDMLAPVVDLEFEGNCARRPTTEELMREISAFVAAVEPIAGKRVIFYAPEEFYRMYLSGNGLNRRLWVRSIWHAPSYSSDWVLWQFHQRGTVDGISGSVDLNVLQKELSVDDIKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A152</accession>
    <name>A0A0M7A152_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative amino-acid-binding protein YxeM</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yxeM_1</name>
        <name evidence="3" type="ORF">LAX5112_01593</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67980.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671376.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01593"/>
    <dbReference type="EnsemblBacteria" id="CTQ67980">
        <property type="protein sequence ID" value="CTQ67980"/>
        <property type="gene ID" value="LAX5112_01593"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00062">
        <property type="entry name" value="PBPb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="domain" description="PBPb" evidence="2">
        <location>
            <begin position="33"/>
            <end position="259"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00062"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ67980.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="263" mass="28913" checksum="8F37FAD334BDBAE4" modified="2015-12-09" version="1">MQRAAIIPAIVMGFAIGLVSMPAASQECPRGGTLIAGAGDYRPYNIVEGEEVRGMDFEVIETILGKLGCDLVKVPLPWTRHLNALRNGTVDIATPVTKTPEREAFAYFSAPYIQADEVLFVRAENVDTYESLGDFFQNDNRLGVVRDYAYGGSFPALSEAYPHLIEMTDSLELNLKQLELGRVDAILGETYVVTSQIQSLGLSKVIKPTNAIVASEPNYIMFSKKSVSQDFVAAFSKELQILQENGEFDRITARYKDSDGAIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1R6</accession>
    <name>A0A0M7A1R6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Cystathionine beta-lyase</fullName>
            <ecNumber evidence="4">4.4.1.8</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">metC_2</name>
        <name evidence="4" type="ORF">LAX5112_01940</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 3">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the trans-sulfuration enzymes family.</text>
    </comment>
    <dbReference type="EC" id="4.4.1.8" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68935.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671683.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01940"/>
    <dbReference type="EnsemblBacteria" id="CTQ68935">
        <property type="protein sequence ID" value="CTQ68935"/>
        <property type="gene ID" value="LAX5112_01940"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004121">
        <property type="term" value="F:cystathionine beta-lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019346">
        <property type="term" value="P:transsulfuration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000277">
        <property type="entry name" value="Cys/Met-Metab_PyrdxlP-dep_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11808">
        <property type="entry name" value="PTHR11808"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01053">
        <property type="entry name" value="Cys_Met_Meta_PP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001434">
        <property type="entry name" value="CGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0456">Lyase</keyword>
    <keyword evidence="2 3" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="modified residue" description="N6-(pyridoxal phosphate)lysine" evidence="2">
        <location>
            <position position="205"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR001434-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU362118"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ68935.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="385" mass="40895" checksum="9BF1A1533FF12CBF" modified="2015-12-09" version="1">MSSHKPPLHADTLLAHGGGGFDAATGAVVPPIPVATTFVRDENYALISDGHLYSRDDNDLFRKTENLLATLENGAESRLFSSGMAAVAAVARVVKPGGTLMAQSGIYWGTTLFLREHCARNNIALVECDASDLATFSDELAITKPDLVWLEVPSNPYLKVADIEKAAALCKTAGALLAVDATAATPLILKPLTLGADLVMHSATKALNGHSDLLGGVITARDAKSEAWDFIKAERKMAGAVMGSFEAWLLLRGLRTLSLRVERMNANAQALADHLETHSKIEKVLYPGLPGHTDHTVAKAQMAGGYGSLMSVQTKGGKEEALKVTGALTLFQRATSLGGTESLIEHRRSIEGETSGIPGNLLRLSLGIEHIDDLIADFDQALKTI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A204</accession>
    <name>A0A0M7A204_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Ni_hydr_CYTB domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">yceJ_1</name>
        <name evidence="4" type="ORF">LAX5112_01982</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ69035.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671654.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01982"/>
    <dbReference type="EnsemblBacteria" id="CTQ69035">
        <property type="protein sequence ID" value="CTQ69035"/>
        <property type="gene ID" value="LAX5112_01982"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022904">
        <property type="term" value="P:respiratory electron transport chain"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011577">
        <property type="entry name" value="Cyt_b561_bac/Ni-Hgenase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016174">
        <property type="entry name" value="Di-haem_cyt_TM"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01292">
        <property type="entry name" value="Ni_hydr_CYTB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81342">
        <property type="entry name" value="SSF81342"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="54"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="91"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="153"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="domain" description="Ni_hydr_CYTB" evidence="3">
        <location>
            <begin position="9"/>
            <end position="186"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01292"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ69035.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="203" mass="22726" checksum="1B18FA227AC0C325" modified="2015-12-09" version="1">MYRNTTTGYGRIAIFFHWTMALLIIGMLAFGLYLKQLPQTDPNLFQLYQLHKSFGFVVLALAAFRLIWRLANPSPKLPAEMPALEKLAAHLGHIGLYVLIFAMPITGWFMVSASPWGIPTVVFNVLPIPHLPYPEALGTKEQAEAFFMILHEYGAYLLIALVVVHIAAALKHHFIAKDDTLKRMTSTTPAQNALESHSEKVKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A298</accession>
    <name>A0A0M7A298_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01564</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67904.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008193764.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01564"/>
    <dbReference type="EnsemblBacteria" id="CTQ67904">
        <property type="protein sequence ID" value="CTQ67904"/>
        <property type="gene ID" value="LAX5112_01564"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.790.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009945">
        <property type="entry name" value="ATPase_inh_sub_z"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038293">
        <property type="entry name" value="DUF1476_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07345">
        <property type="entry name" value="DUF1476"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF031780">
        <property type="entry name" value="UCP031780"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67904.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="107" mass="12342" checksum="3A799D7FACC633A5" modified="2015-12-09" version="1">MSTFDKREQGFENKFAHDEELRFKATARRNKLLGLWAAGLLGYEGAKVEEYAKEVVRADFEEPGDEDVFRKIRADFDANNVDQSDHQIRRTMDELMATAVDQLQNEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2C6</accession>
    <name>A0A0M7A2C6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">(S)-2-haloacid dehalogenase</fullName>
            <ecNumber evidence="2">3.8.1.2</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="2">2-haloalkanoic acid dehalogenase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="2">Halocarboxylic acid halidohydrolase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="2">L-2-haloacid dehalogenase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3" type="primary">hdl IVa</name>
        <name evidence="3" type="ORF">LAX5112_01549</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Catalyzes the hydrolytic dehalogenation of small (S)-2-haloalkanoic acids to yield the corresponding (R)-2-hydroxyalkanoic acids.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>an (S)-2-haloacid + H2O = a (2R)-2-hydroxycarboxylate + a halide anion + H(+)</text>
            <dbReference type="Rhea" id="RHEA:11192"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16042"/>
            <dbReference type="ChEBI" id="CHEBI:58314"/>
            <dbReference type="ChEBI" id="CHEBI:137405"/>
            <dbReference type="EC" id="3.8.1.2"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the HAD-like hydrolase superfamily. S-2-haloalkanoic acid dehalogenase family.</text>
    </comment>
    <dbReference type="EC" id="3.8.1.2" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67863.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671345.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01549"/>
    <dbReference type="EnsemblBacteria" id="CTQ67863">
        <property type="protein sequence ID" value="CTQ67863"/>
        <property type="gene ID" value="LAX5112_01549"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018784">
        <property type="term" value="F:(S)-2-haloacid dehalogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd02588">
        <property type="entry name" value="HAD_L2-DEX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.240">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006328">
        <property type="entry name" value="2-HAD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006439">
        <property type="entry name" value="HAD-SF_hydro_IA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041492">
        <property type="entry name" value="HAD_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023198">
        <property type="entry name" value="PGP-like_dom2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13419">
        <property type="entry name" value="HAD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00413">
        <property type="entry name" value="HADHALOGNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01493">
        <property type="entry name" value="HAD-SF-IA-v2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01428">
        <property type="entry name" value="HAD_type_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008106"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU368077"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ67863.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="220" mass="24520" checksum="A4B52CB669B8B8C6" modified="2015-12-09" version="1">MAHAAYVFDAYGTLFDVHAAVRKHAAKLGPDAQRLSSLWREKQLEYSWVRALMGQYKDFWELTQEGLDTAFALVPTADKSMKDDLLNAYWELDCYPEVPQVLTDLKATGAKIAILSNGSPAMLDAAAKAAGLTELFDEIFSVDELRTFKTNPQTYEMVTTHFRIYPEEVSFQSSNRWDVAGATAFGFRTVWMNRTGMPDEYTDLAPKAVLADLTGLAALG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2C9</accession>
    <name>A0A0M7A2C9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 5">30S ribosomal protein S8</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 7" type="primary">rpsH</name>
        <name evidence="7" type="ORF">LAX5112_01740</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Part of the 30S ribosomal subunit. Contacts proteins S5 and S12.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 5 6">Belongs to the universal ribosomal protein uS8 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68440.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_006936438.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01740"/>
    <dbReference type="EnsemblBacteria" id="CTQ68440">
        <property type="protein sequence ID" value="CTQ68440"/>
        <property type="gene ID" value="LAX5112_01740"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01302_B">
        <property type="entry name" value="Ribosomal_S8_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000630">
        <property type="entry name" value="Ribosomal_S8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035987">
        <property type="entry name" value="Ribosomal_S8_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11758">
        <property type="entry name" value="PTHR11758"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00410">
        <property type="entry name" value="Ribosomal_S8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56047">
        <property type="entry name" value="SSF56047"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00053">
        <property type="entry name" value="RIBOSOMAL_S8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5 6" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3 5 6" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="5" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="5" id="KW-0699">rRNA-binding</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00016791"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01302"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003660"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ68440.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="132" mass="14744" checksum="FFC03888520B7080" modified="2015-12-09" version="1">MAISDPLGDMLTRIRNAQMRRKNKVSSPNSKLRAHVLDVLAKEGYIRGYTTVEYEGGKSELEIELKYFDGEPVIRTIERVSKPGRRVYSSVKNIPHVSNGLGVSIISTPRGVMSDHQARDENVGGEVLCRVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2Y8</accession>
    <name>A0A0M7A2Y8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">PepSY domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01882</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68776.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671580.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ68776">
        <property type="protein sequence ID" value="CTQ68776"/>
        <property type="gene ID" value="LAX5112_01882"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025711">
        <property type="entry name" value="PepSY"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13670">
        <property type="entry name" value="PepSY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809415" description="PepSY domain-containing protein" evidence="1">
        <location>
            <begin position="27"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="domain" description="PepSY" evidence="2">
        <location>
            <begin position="11"/>
            <end position="87"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ68776.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="90" mass="9455" checksum="2D662AE47639D03E" modified="2015-12-09" version="1">MTNMKSWVAGAALGTAVMLAAGSALAAVAVGDTLGTKVSEIAAELEDKGYTIREIDVSRSKIEVEVTFDGADYEIDVDRTSGMVIKIEDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3A7</accession>
    <name>A0A0M7A3A7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">LIV-I protein H</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">livH_8</name>
        <name evidence="7" type="ORF">LAX5112_02155</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69548.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671808.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02155"/>
    <dbReference type="EnsemblBacteria" id="CTQ69548">
        <property type="protein sequence ID" value="CTQ69548"/>
        <property type="gene ID" value="LAX5112_02155"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001851">
        <property type="entry name" value="ABC_transp_permease"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02653">
        <property type="entry name" value="BPD_transp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="6"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="41"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="64"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="95"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="135"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="188"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="228"/>
            <end position="249"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="261"/>
            <end position="278"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ69548.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="287" mass="30190" checksum="02F86D4667B30882" modified="2015-12-09" version="1">MIWLDTIVQGVLLGGLYALFAAGLSLVFGIMRLVNLAHGDLIVMAAYLILVLVTLLGLDPFVATLIAAPILFGIGWLLQMHVLNRTLGTDILPPLLVTFGLSIVIQNALLEGFSADSQRLSVGPLETASLPLGPVTVGVMPLLTFLSAILVIVALNQLFYRTSLGRAFRATSDDATTASLMGIRPQNIFATATGIAMVVVTIAALYLGTRANFDPTIGPARLIYAFEAVIIGGLGSLWGTLAGGIIIGVAQTLGAAINPEWQILAGHIAFVIVLLLKPRGLFPRAVD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3P0</accession>
    <name>A0A0M7A3P0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">3-oxoacyl-[acyl-carrier-protein] reductase FabG</fullName>
            <ecNumber evidence="1">1.1.1.100</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">fabG_6</name>
        <name evidence="1" type="ORF">LAX5112_02039</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.1.1.100" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69237.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671724.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02039"/>
    <dbReference type="EnsemblBacteria" id="CTQ69237">
        <property type="protein sequence ID" value="CTQ69237"/>
        <property type="gene ID" value="LAX5112_02039"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004316">
        <property type="term" value="F:3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ69237.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="255" mass="27024" checksum="8B6796E9A466662F" modified="2015-12-09" version="1">MTETVAIIQGGTSGMGLATAKRLAARNVPLVLIGRNADKLSTTKAEIEAAYEVNVQTWQADVTDQKDVAQLVERIAGLQAPIGYLVNAAGAFSPKPFLDHTPEDYDLYHAFNRGTFQITQAVARKMAERAAGSIVNLGSMWAHQAVKATPSSAYSMAKAGLHALTQHLAMELGDQGIRVNAVAPAVVETPIYGAFIPEDQISQTLKDGFDAFHPIGRIGTADDVAATVDFLLSEQAGWVTGAVWDVDGGVMAGRC</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3Q9</accession>
    <name>A0A0M7A3Q9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative sterol carrier protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02024</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69211.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008190927.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02024"/>
    <dbReference type="EnsemblBacteria" id="CTQ69211">
        <property type="protein sequence ID" value="CTQ69211"/>
        <property type="gene ID" value="LAX5112_02024"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1050.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039543">
        <property type="entry name" value="POX18/UbiT/NSL-TP1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003033">
        <property type="entry name" value="SCP2_sterol-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036527">
        <property type="entry name" value="SCP2_sterol-bd_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10094">
        <property type="entry name" value="PTHR10094"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02036">
        <property type="entry name" value="SCP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55718">
        <property type="entry name" value="SSF55718"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SCP2" evidence="1">
        <location>
            <begin position="20"/>
            <end position="92"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02036"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69211.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="93" mass="9782" checksum="B25111BA4956A9A8" modified="2015-12-09" version="1">MSLEQLTNDIRDKVSGGGIEESVKFDLGEDGTIFLQGSEVSNEDADADCTIKMSAEDLSDMLSGDLNPTAAFMGGKMQVEGDMSVAMKLGSVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4F5</accession>
    <name>A0A0M7A4F5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Superfamily II helicase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02139</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69507.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671795.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02139"/>
    <dbReference type="EnsemblBacteria" id="CTQ69507">
        <property type="protein sequence ID" value="CTQ69507"/>
        <property type="gene ID" value="LAX5112_02139"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004386">
        <property type="term" value="F:helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0347">Helicase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="220"/>
            <end position="249"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="220"/>
            <end position="237"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69507.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="716" mass="78995" checksum="09FC108043658660" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4W0</accession>
    <name>A0A0M7A4W0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DsbC domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02366</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70118.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671985.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02366"/>
    <dbReference type="EnsemblBacteria" id="CTQ70118">
        <property type="protein sequence ID" value="CTQ70118"/>
        <property type="gene ID" value="LAX5112_02366"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028250">
        <property type="entry name" value="DsbDN"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11412">
        <property type="entry name" value="DsbC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809237" description="DsbC domain-containing protein" evidence="1">
        <location>
            <begin position="22"/>
            <end position="274"/>
        </location>
    </feature>
    <feature type="domain" description="DsbC" evidence="2">
        <location>
            <begin position="43"/>
            <end position="149"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF11412"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ70118.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="274" mass="29267" checksum="05B4188CD20B6001" modified="2015-12-09" version="1">MKSALALLFFLAITLPTAALAAASEWVTVKGGAVRLISAGPPENGTYWAGLEFQLEPGWHTYWRYPGEAGIPPQITWTAKSNIKDKTVLYPVPERYSDGFSDSIVYHDGIILPLKITPEDASKPAQISLELFFGVCKDICVPGEATLSLQLDPDARPDSLSAKLINRDLQAVPGIAPSGGLDIVSVTLVESDGKRLRIEAETGSAGAPDLFAAGPEGSYIALPKLAEGETGNPVWHLSTKGLKTTTSDSSLRLVLSDGNHALEHLSPIQPNWLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5B6</accession>
    <name>A0A0M7A5B6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Sulfurtransferase TusA</fullName>
            <ecNumber evidence="3">2.8.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">tusA</name>
        <name evidence="3" type="ORF">LAX5112_02246</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the sulfur carrier protein TusA family.</text>
    </comment>
    <dbReference type="EC" id="2.8.1.-" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69781.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671874.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02246"/>
    <dbReference type="EnsemblBacteria" id="CTQ69781">
        <property type="protein sequence ID" value="CTQ69781"/>
        <property type="gene ID" value="LAX5112_02246"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.110.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001455">
        <property type="entry name" value="TusA-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036868">
        <property type="entry name" value="TusA-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01206">
        <property type="entry name" value="TusA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64307">
        <property type="entry name" value="SSF64307"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01148">
        <property type="entry name" value="UPF0033"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="UPF0033" evidence="2">
        <location>
            <begin position="19"/>
            <end position="43"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS01148"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ69781.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="87" mass="9500" checksum="C82DB2DA54F80D73" modified="2015-12-09" version="1">MQGKQDAVNGVARVTENTLDLMGLKCPLPVLKTKKALSRLNAGAELTVQTTDPMAEIDIPHFCQEQGHTLVNKEKTETGHSFVIRKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5E7</accession>
    <name>A0A0M7A5E7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02460</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70308.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672056.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02460"/>
    <dbReference type="EnsemblBacteria" id="CTQ70308">
        <property type="protein sequence ID" value="CTQ70308"/>
        <property type="gene ID" value="LAX5112_02460"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016791">
        <property type="term" value="F:phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016311">
        <property type="term" value="P:dephosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.190.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029021">
        <property type="entry name" value="Prot-tyrosine_phosphatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016130">
        <property type="entry name" value="Tyr_Pase_AS"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52799">
        <property type="entry name" value="SSF52799"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00383">
        <property type="entry name" value="TYR_PHOSPHATASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ70308.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="169" mass="18276" checksum="D81F87B19698C94F" modified="2015-12-09" version="1">MLHVCSLSRLSETVEKTGAKSLVTLINAEMPVPTPPSISAERHLNLSFNDIPAPVKGLTPPGESHVEQLLAFVRAWDRTSPMVIHCWAGISRSTAGAYVTACALNPEADEYTMAATLRRHSPSATPNPRIVAMADRILNRDGRMIDAIRGIGRGANAFEGAPFEMPIFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5F6</accession>
    <name>A0A0M7A5F6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02277</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69847.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671890.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02277"/>
    <dbReference type="EnsemblBacteria" id="CTQ69847">
        <property type="protein sequence ID" value="CTQ69847"/>
        <property type="gene ID" value="LAX5112_02277"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038063">
        <property type="entry name" value="Transpep_catalytic_dom"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141523">
        <property type="entry name" value="SSF141523"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="334"/>
            <end position="376"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69847.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="410" mass="45303" checksum="5A9FBFE02D8078F3" modified="2015-12-09" version="1">MIFGRFSSSAENRQADHQRMYKRACTRVAAVLLAGVLVGCQADDFASGPNKHKAPVSASIKRKMADLNMPSTSPIMIRIFKEESELEVWKQTRTGKFKLLEEFEICKWSGKLGPKFKEGDRQAPEGFYEVTPALMNPNSSYHLAFNLGFPNRYDQAHGRTGSHLMVHGACSSRGCYAMTDEQVQDIYALARDSFKGGARSFQVQAFPFRMTPENLAKHYDSQHLAFWKMLKTGYDHFEVTNTPPAISVCEKKYVFDATPLVDGVPFRASAKCPAYEVSPRIAMAVAAKQNRDSEKFETIVARLDAREERKQRWEDRQSQIAEVLSFGDEGTEDPVAAASEAAPAETPPTAVSNAESPAENQPVEAAFAANNESRSSSTANFFKRWVPFGPKAAEAGVGPIATDVVPAQKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5H6</accession>
    <name>A0A0M7A5H6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Glycine dehydrogenase (aminomethyl-transferring)</fullName>
            <ecNumber evidence="2">1.4.4.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">gcvPB</name>
        <name evidence="8" type="ORF">LAX5112_02381</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>(R)-N(6)-lipoyl-L-lysyl-[glycine-cleavage complex H protein] + glycine + H(+) = (R)-N(6)-(S(8)-aminomethyldihydrolipoyl)-L-lysyl-[glycine-cleavage complex H protein] + CO2</text>
            <dbReference type="Rhea" id="RHEA:24304"/>
            <dbReference type="Rhea" id="RHEA-COMP:10494"/>
            <dbReference type="Rhea" id="RHEA-COMP:10495"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:57305"/>
            <dbReference type="ChEBI" id="CHEBI:83099"/>
            <dbReference type="ChEBI" id="CHEBI:83143"/>
            <dbReference type="EC" id="1.4.4.2"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="1.4.4.2" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70149.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671998.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02381"/>
    <dbReference type="EnsemblBacteria" id="CTQ70149">
        <property type="protein sequence ID" value="CTQ70149"/>
        <property type="gene ID" value="LAX5112_02381"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004375">
        <property type="term" value="F:glycine dehydrogenase (decarboxylating) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006546">
        <property type="term" value="P:glycine catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000192">
        <property type="entry name" value="Aminotrans_V_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020581">
        <property type="entry name" value="GDC_P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11773">
        <property type="entry name" value="PTHR11773"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00266">
        <property type="entry name" value="Aminotran_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 8" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aminotran_5" evidence="7">
        <location>
            <begin position="176"/>
            <end position="305"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="502"/>
            <end position="530"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003788"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00033655"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00266"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ70149.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="530" mass="57081" checksum="3E2888A48D16A37D" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6F2</accession>
    <name>A0A0M7A6F2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Acetyl-coenzyme A synthetase</fullName>
            <ecNumber evidence="4">6.2.1.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">acsA_1</name>
        <name evidence="4" type="ORF">LAX5112_02261</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="6.2.1.1" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69810.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671884.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02261"/>
    <dbReference type="EnsemblBacteria" id="CTQ69810">
        <property type="protein sequence ID" value="CTQ69810"/>
        <property type="gene ID" value="LAX5112_02261"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003987">
        <property type="term" value="F:acetate-CoA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12780">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025110">
        <property type="entry name" value="AMP-bd_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045851">
        <property type="entry name" value="AMP-bd_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020845">
        <property type="entry name" value="AMP-binding_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000873">
        <property type="entry name" value="AMP-dep_Synth/Lig"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042099">
        <property type="entry name" value="ANL_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00501">
        <property type="entry name" value="AMP-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13193">
        <property type="entry name" value="AMP-binding_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00455">
        <property type="entry name" value="AMP_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0007">Acetylation</keyword>
    <keyword evidence="4" id="KW-0436">Ligase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AMP-binding" evidence="2">
        <location>
            <begin position="32"/>
            <end position="440"/>
        </location>
    </feature>
    <feature type="domain" description="AMP-binding_C" evidence="3">
        <location>
            <begin position="450"/>
            <end position="528"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022990"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF13193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ69810.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="543" mass="59134" checksum="DEDE6DA5515704F6" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6F6</accession>
    <name>A0A0M7A6F6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Cyclopropane-fatty-acyl-phospholipid synthase</fullName>
            <ecNumber evidence="2">2.1.1.79</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">cfa_2</name>
        <name evidence="2" type="ORF">LAX5112_02071</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the CFA/CMAS family.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.79" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69323.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671745.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02071"/>
    <dbReference type="EnsemblBacteria" id="CTQ69323">
        <property type="protein sequence ID" value="CTQ69323"/>
        <property type="gene ID" value="LAX5112_02071"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008825">
        <property type="term" value="F:cyclopropane-fatty-acyl-phospholipid synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008610">
        <property type="term" value="P:lipid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003333">
        <property type="entry name" value="Mycolic_cyclopropane_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF003085">
        <property type="entry name" value="CMAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010815"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69323.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="406" mass="46072" checksum="6AAA1F1B61E347B8" modified="2015-12-09" version="1">MKLLSSLLRAFIKNGRMRVLDVSGGLHEFGSGENGPTVTIRLHDKKLYTSLFLNPELAAGEAYMDGTLTMEEGSTCYDFLFLFSINRAPLGAHPVQGLLRKSWKAFRRRQQANSVDRAKKQARHHYDLSTDLYRLFLDEGLNYSCAYYTSPDDSLEDAQAAKLTHLVAKLDLKPGMEVLEIGGGWGSLAIQMAKAGANVTSLNVSPEQVKIAEERVREAGVEDKVTFVLKDYREFEGQFDRVISVGMMEHVGIGHQDEYFAKVKECLTDNGFAVIHSIGRMTPPGTTGPFFRKYIFPGGYVPALSEVFASTERLGLWVCDAEILRLHYYYTCRDWRVRFLDKWQEAADLYDERFCRMWEFYLCAAELGFLHGSNMVMQLLLSKERDAVPIIRDFIVDNEREMNATG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6K5</accession>
    <name>A0A0M7A6K5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Cupin_2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02603</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70765.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672187.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02603"/>
    <dbReference type="EnsemblBacteria" id="CTQ70765">
        <property type="protein sequence ID" value="CTQ70765"/>
        <property type="gene ID" value="LAX5112_02603"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013096">
        <property type="entry name" value="Cupin_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07883">
        <property type="entry name" value="Cupin_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cupin_2" evidence="1">
        <location>
            <begin position="43"/>
            <end position="105"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70765.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="148" mass="15882" checksum="4803CCEAB5E28BB9" modified="2015-12-09" version="1">MQNGAGITASSDGLDSVSWNVVGHTYTPKVHSTNAFIWNAVVPAETFVPPHIHPTQDEWIVMLEGELEVEMGGQVHKAGPGDTVRMPMGEAHGIFNRSGKTVTCVFGVAPARKLFDLFGALNGVTDPEELVRLSALHEVDFLPPPDPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6R2</accession>
    <name>A0A0M7A6R2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Acetophenone carboxylase gamma subunit</fullName>
            <ecNumber evidence="3">6.4.1.8</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">apc3_1</name>
        <name evidence="3" type="ORF">LAX5112_02382</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="6.4.1.8" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70152.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02382"/>
    <dbReference type="EnsemblBacteria" id="CTQ70152">
        <property type="protein sequence ID" value="CTQ70152"/>
        <property type="gene ID" value="LAX5112_02382"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016874">
        <property type="term" value="F:ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008040">
        <property type="entry name" value="Hydant_A_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002821">
        <property type="entry name" value="Hydantoinase_A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045079">
        <property type="entry name" value="Oxoprolinase_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11365">
        <property type="entry name" value="PTHR11365"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05378">
        <property type="entry name" value="Hydant_A_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01968">
        <property type="entry name" value="Hydantoinase_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="SSF53067"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0436">Ligase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Hydant_A_N" evidence="2">
        <location>
            <begin position="5"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="domain" description="Hydantoinase_A" evidence="1">
        <location>
            <begin position="188"/>
            <end position="320"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF05378"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ70152.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="668" mass="70662" checksum="C7F0E500C974F07D" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A758</accession>
    <name>A0A0M7A758_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02164</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69563.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02164"/>
    <dbReference type="EnsemblBacteria" id="CTQ69563">
        <property type="protein sequence ID" value="CTQ69563"/>
        <property type="gene ID" value="LAX5112_02164"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035437">
        <property type="entry name" value="SNase_OB-fold_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50199">
        <property type="entry name" value="SSF50199"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809490" evidence="1">
        <location>
            <begin position="28"/>
            <end position="275"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69563.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="275" mass="29938" checksum="1444ED642243FCB6" modified="2015-12-09" version="1">MARWQRQLWTGAVVAAFSVFLATGAHAEFTSCVLENGVPVPVVETEEAGVFSDITGQQYHASDVLQISTSGLPRAGSSVNRSSFQALPIAPQNRWQMTPAMIVMNANSAPALLQKELLAAGKAIFMPQASFGACAKLLRSSEQAARRAGRGLWGQNRAAPVYWAGNPDLLLKAAGDYVIVQGRIVSLGKTPRTRYLNFGRYWKTDFTVTIARSEEDAIAMHLSEIGLSFEDLAQKAVEIRGVLDVKDGPLMAWSHPEQLVVVEQKRAGRDGQNRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A780</accession>
    <name>A0A0M7A780_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">LemA family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">LAX5112_02444</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the LemA family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70276.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672134.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02444"/>
    <dbReference type="EnsemblBacteria" id="CTQ70276">
        <property type="protein sequence ID" value="CTQ70276"/>
        <property type="gene ID" value="LAX5112_02444"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1440.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023353">
        <property type="entry name" value="LemA-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007156">
        <property type="entry name" value="MamQ_LemA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34478">
        <property type="entry name" value="PTHR34478"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04011">
        <property type="entry name" value="LemA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF140478">
        <property type="entry name" value="SSF140478"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008854"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ70276.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="185" mass="20481" checksum="D6718E7BABB5F0BE" modified="2015-12-09" version="1">MTTWFVLALLIALSVFAILLYNALVKKRQMVEEGWSGIDVQLKRRANLIPNLVETVKAYASHEKEALENVTRLRTDAAAVSGSDIAGRAKVEGALTQALGRLFAVAEDYPDLKASQNFSDLHNSLDEIENAIQMARRYYNGAVRGLNVAVESFPSNLIAGQFGFQKAEYFEIEDAAERAVPKVEF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7C6</accession>
    <name>A0A0M7A7C6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">phoR_1</name>
        <name evidence="6" type="ORF">LAX5112_02535</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70511.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672108.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02535"/>
    <dbReference type="EnsemblBacteria" id="CTQ70511">
        <property type="protein sequence ID" value="CTQ70511"/>
        <property type="gene ID" value="LAX5112_02535"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="27"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="5">
        <location>
            <begin position="217"/>
            <end position="438"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ70511.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="438" mass="48677" checksum="BDBE1D349979EEC3" modified="2015-12-09" version="1">MTVSQPPFEDSPQISPAETPRRRLRDARWALLASAVILTGLVVVYEIPVWVGLLCFTATLAATLSIPRNSASRRLKINAQRRMRRMWPGTDMKVTVDALPTPCFVADARGITRYVNARAMEIYPGAKPGDPLSFSLRAPSLLEAFDRACSNGTAERINWIEKVPTETWLEAYIAPIHEPGPQEGQTSSRKPAFVLVVVQDQTENRRLERMRTDFVANASHELRTPLASLTGFVETLQGPARDDAEARDRFLSIMLDQAGRMRRLIDDILSLSRIELRAHVRPQTSVDLCEIVRHTNDALGPLARDMKMTIRLDLPETPVMISGDRDELIQVTENLVENALKYGSTGEAVDVSLTPKQTGEGETAWELAVRDYGEGIAPEHLPRLTERFYRVDVDSSRAMKGTGLGLAIVKHILTRHRARLDVESAPGKGATFKVIISG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7I8</accession>
    <name>A0A0M7A7I8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02406</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70200.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672020.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02406"/>
    <dbReference type="EnsemblBacteria" id="CTQ70200">
        <property type="protein sequence ID" value="CTQ70200"/>
        <property type="gene ID" value="LAX5112_02406"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010593">
        <property type="entry name" value="DUF1159"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007922">
        <property type="entry name" value="DUF721/UPF0232"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05258">
        <property type="entry name" value="DciA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF032064">
        <property type="entry name" value="UCP032064"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ70200.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="152" mass="16927" checksum="E4BF80CB36849448" modified="2015-12-09" version="1">MTPACKKRGFASIDIIASWADIVGERYGTRVQPDRLIWPRQPELSDPERPPQPATLVVHTDGPTALMLSHDSPQVIERINTFYGWAAIGRIKIQQKPVAVKPASTRKALRPLTRSEEQQLDAKLETVENDRLREALKKLGAQVIARNADTAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A821</accession>
    <name>A0A0M7A821_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Making large colonies protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">mlc_1</name>
        <name evidence="3" type="ORF">LAX5112_02692</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ROK (NagC/XylR) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71029.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672250.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02692"/>
    <dbReference type="EnsemblBacteria" id="CTQ71029">
        <property type="protein sequence ID" value="CTQ71029"/>
        <property type="gene ID" value="LAX5112_02692"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000835">
        <property type="entry name" value="HTH_MarR-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000600">
        <property type="entry name" value="ROK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18964">
        <property type="entry name" value="PTHR18964"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13463">
        <property type="entry name" value="HTH_27"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00480">
        <property type="entry name" value="ROK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="SSF53067"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH marR-type" evidence="2">
        <location>
            <begin position="19"/>
            <end position="72"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13463"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ71029.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="439" mass="47056" checksum="77B90671737F6116" modified="2015-12-09" version="1">MDEIRKSGRGSNSVQLRRYNERIVLQILRRAGEASKAELARAVQLTNAAIGAIIQTLIEEGLIVEAGKRHDGSRGQPATILKLAPRGAFSFGVRLDRTSLETVLMDFSGQIINRRTHEMILPEPAKALTILTDDLEQLRENLSEGEQDRITGIGLAQPFNLGAWLHELGLPEAHFKDWEDYDLASALEEETGLPVFSENDGTAAAVAELFYGVGRQNDNFLYLFLGPAIGGGLVMNGDVVRGVSGNSGDVAMIPVPPSKLPTANAPRQEWDLLLARASLVALARHMSPDNFSELSRIDLRQAIEEADDKAREWTEDCVSALAVALRSAFAILDMPLVVLDSDLGNDFNTSFAEAMASAVADAAPESRTSPQMATGSFGQDAGAVGAASLPQFFNFSPRTAILTGGRSLGPAGSGRSEDRAGFPARAARLGSHLATPNRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8L9</accession>
    <name>A0A0M7A8L9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Phospho-N-acetylmuramoyl-pentapeptide-transferase</fullName>
            <ecNumber evidence="9">2.7.8.13</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">UDP-MurNAc-pentapeptide phosphotransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9 10" type="primary">mraY</name>
        <name evidence="10" type="ORF">LAX5112_02612</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Catalyzes the initial step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan: transfers peptidoglycan precursor phospho-MurNAc-pentapeptide from UDP-MurNAc-pentapeptide onto the lipid carrier undecaprenyl phosphate, yielding undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide, known as lipid I.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>di-trans,octa-cis-undecaprenyl phosphate + UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-gamma-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine = di-trans-octa-cis-undecaprenyl diphospho-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine + UMP</text>
            <dbReference type="Rhea" id="RHEA:28386"/>
            <dbReference type="ChEBI" id="CHEBI:57865"/>
            <dbReference type="ChEBI" id="CHEBI:60392"/>
            <dbReference type="ChEBI" id="CHEBI:61386"/>
            <dbReference type="ChEBI" id="CHEBI:61387"/>
            <dbReference type="EC" id="2.7.8.13"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="9">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="9">Cell wall biogenesis; peptidoglycan biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cell membrane</location>
            <topology evidence="9">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the glycosyltransferase 4 family. MraY subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.7.8.13" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70792.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672194.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02612"/>
    <dbReference type="EnsemblBacteria" id="CTQ70792">
        <property type="protein sequence ID" value="CTQ70792"/>
        <property type="gene ID" value="LAX5112_02612"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00219"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008963">
        <property type="term" value="F:phospho-N-acetylmuramoyl-pentapeptide-transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051992">
        <property type="term" value="F:UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007049">
        <property type="term" value="P:cell cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008360">
        <property type="term" value="P:regulation of cell shape"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06852">
        <property type="entry name" value="GT_MraY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00038">
        <property type="entry name" value="MraY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000715">
        <property type="entry name" value="Glycosyl_transferase_4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003524">
        <property type="entry name" value="PNAcMuramoyl-5peptid_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018480">
        <property type="entry name" value="PNAcMuramoyl-5peptid_Trfase_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22926">
        <property type="entry name" value="PTHR22926"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00953">
        <property type="entry name" value="Glycos_transf_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10555">
        <property type="entry name" value="MraY_sig1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00445">
        <property type="entry name" value="mraY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01347">
        <property type="entry name" value="MRAY_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01348">
        <property type="entry name" value="MRAY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 9" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="3 9" id="KW-0132">Cell division</keyword>
    <keyword evidence="9" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="9" id="KW-0133">Cell shape</keyword>
    <keyword evidence="9" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="9" id="KW-0460">Magnesium</keyword>
    <keyword evidence="7 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-0573">Peptidoglycan synthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 9 10" id="KW-0808">Transferase</keyword>
    <keyword evidence="5 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 9" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="20"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="74"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="97"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="134"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="168"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="199"/>
            <end position="219"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="239"/>
            <end position="256"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="263"/>
            <end position="282"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="288"/>
            <end position="311"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="338"/>
            <end position="357"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005583"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00038"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ70792.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="360" mass="38302" checksum="0F67D3BA24CA94FA" modified="2015-12-09" version="1">MFYFLGQFADQVSALNVFRYITFRTGGAIMTALFFVFLFGPKIIASLRIRQGHGQPIRADGPESHLSKKGTPTMGGLMILSGALVAALLWADLSNPYVWVVIGVTVGFGMIGFYDDYLKVTKSSHKGFGGKARLGLEFLIAAIAAFTVTVLDTTAFSGALTFPFFKDFTLNLGLIFIPFAAFVMVGAGNAVNLTDGLDGLAIVPVMIACASFGLIAYLSGNAVFANYLQIHHVAGTGELAVICGAVIGAGLGFLWFNAPPAAIFMGDTGSLALGGMIGAIAVATKHEIVLAIIGGLFVLEAVSVIVQVMSFKLTGKRVFRMAPIHHHFEIQGWTESQVVIRFWIISVVLALIGLATLKLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A980</accession>
    <name>A0A0M7A980_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Methyltransferase</fullName>
            <ecNumber evidence="8">2.1.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">dpnA</name>
        <name evidence="12" type="ORF">LAX5112_02398</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>a 2'-deoxyadenosine in DNA + S-adenosyl-L-methionine = an N(6)-methyl-2'-deoxyadenosine in DNA + H(+) + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:15197"/>
            <dbReference type="Rhea" id="RHEA-COMP:12418"/>
            <dbReference type="Rhea" id="RHEA-COMP:12419"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:90615"/>
            <dbReference type="ChEBI" id="CHEBI:90616"/>
            <dbReference type="EC" id="2.1.1.72"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the N(4)/N(6)-methyltransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.-" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70184.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02398"/>
    <dbReference type="EnsemblBacteria" id="CTQ70184">
        <property type="protein sequence ID" value="CTQ70184"/>
        <property type="gene ID" value="LAX5112_02398"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008170">
        <property type="term" value="F:N-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009007">
        <property type="term" value="F:site-specific DNA-methyltransferase (adenine-specific) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002941">
        <property type="entry name" value="DNA_methylase_N4/N6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002052">
        <property type="entry name" value="DNA_methylase_N6_adenine_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040843">
        <property type="entry name" value="RAMA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001091">
        <property type="entry name" value="RM_Methyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01555">
        <property type="entry name" value="N6_N4_Mtase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18755">
        <property type="entry name" value="RAMA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00508">
        <property type="entry name" value="S21N4MTFRASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00092">
        <property type="entry name" value="N6_MTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0235">DNA replication</keyword>
    <keyword evidence="7" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="3 12" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="4 12" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N6_N4_Mtase" evidence="10">
        <location>
            <begin position="46"/>
            <end position="266"/>
        </location>
    </feature>
    <feature type="domain" description="RAMA" evidence="11">
        <location>
            <begin position="277"/>
            <end position="378"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001279"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006594"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU362026"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF01555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF18755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ70184.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="380" mass="42249" checksum="AA5A5D14C6F8E2E1" modified="2015-12-09" version="1">MRVLRTGVSPEAPQSTSSKEADASWLNTILKGDCVAALEKMPSRSVDLVFADPPYNLQLGGDLHRPDQSKVDACDDHWDQFESFEAYDAFTRAWLLAARRVMKTDGSLYVIGSYHNIFRVGAILQDLGFWIMNDIVWLKSNPMPNFRGKRFTNAHETMIWATKSKDAKPTFNYDALKTFNEDLQMRSDWHLPLCTGAERLKGKDGQKVHPTQKPEALLYRVLTASSKPGDVVLDPFFGTGTTGAVARKLGRNYVGVEREQDYIDAATARIAAIQPGDEKALEMQQGKRAQKRIPFGTLLENGMLEPGTELTCSKGKHLAVVRADGSLKSGGHTGSIHKVGALVQGQEACNGWTFWHTKEGSKKSPIDELRKEIRSRLQAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9R3</accession>
    <name>A0A0M7A9R3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Apolipoprotein N-acyltransferase</fullName>
            <shortName evidence="9">ALP N-acyltransferase</shortName>
            <ecNumber evidence="9">2.3.1.269</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9 11" type="primary">lnt</name>
        <name evidence="11" type="ORF">LAX5112_02795</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Catalyzes the phospholipid dependent N-acylation of the N-terminal cysteine of apolipoprotein, the last step in lipoprotein maturation.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>a glycerophospholipid + N-terminal S-1,2-diacyl-sn-glyceryl-L-cysteinyl-[lipoprotein] = a 2-acyl-sn-glycero-3-phospholipid + H(+) + N-acyl-S-1,2-diacyl-sn-glyceryl-L-cysteinyl-[lipoprotein]</text>
            <dbReference type="Rhea" id="RHEA:48228"/>
            <dbReference type="Rhea" id="RHEA-COMP:14681"/>
            <dbReference type="Rhea" id="RHEA-COMP:14684"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:136912"/>
            <dbReference type="ChEBI" id="CHEBI:140656"/>
            <dbReference type="ChEBI" id="CHEBI:140657"/>
            <dbReference type="ChEBI" id="CHEBI:140660"/>
            <dbReference type="EC" id="2.3.1.269"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="9">Protein modification; lipoprotein biosynthesis (N-acyl transfer).</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cell membrane</location>
            <topology evidence="9">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the CN hydrolase family. Apolipoprotein N-acyltransferase subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.269" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71361.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02795"/>
    <dbReference type="EnsemblBacteria" id="CTQ71361">
        <property type="protein sequence ID" value="CTQ71361"/>
        <property type="gene ID" value="LAX5112_02795"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00666"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016410">
        <property type="term" value="F:N-acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042158">
        <property type="term" value="P:lipoprotein biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd07571">
        <property type="entry name" value="ALP_N-acyl_transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01148">
        <property type="entry name" value="Lnt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004563">
        <property type="entry name" value="Apolipo_AcylTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003010">
        <property type="entry name" value="C-N_Hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036526">
        <property type="entry name" value="C-N_Hydrolase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045378">
        <property type="entry name" value="LNT_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00795">
        <property type="entry name" value="CN_hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20154">
        <property type="entry name" value="LNT_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56317">
        <property type="entry name" value="SSF56317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00546">
        <property type="entry name" value="lnt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50263">
        <property type="entry name" value="CN_HYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 9 11" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="3 9" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="11" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="7 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 9 11" id="KW-0808">Transferase</keyword>
    <keyword evidence="5 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 9" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="76"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="108"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="143"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="186"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="213"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="506"/>
            <end position="528"/>
        </location>
    </feature>
    <feature type="domain" description="CN hydrolase" evidence="10">
        <location>
            <begin position="251"/>
            <end position="500"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01148"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50263"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ71361.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="538" mass="58950" checksum="E5D71579B35664E8" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAN7</accession>
    <name>A0A0M7AAN7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Pentalenene oxygenase</fullName>
            <ecNumber evidence="2">1.14.13.133</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ptlI</name>
        <name evidence="2" type="ORF">LAX5112_02976</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the cytochrome P450 family.</text>
    </comment>
    <dbReference type="EC" id="1.14.13.133" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71929.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02976"/>
    <dbReference type="EnsemblBacteria" id="CTQ71929">
        <property type="protein sequence ID" value="CTQ71929"/>
        <property type="gene ID" value="LAX5112_02976"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
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        <property type="term" value="F:monooxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016705">
        <property type="term" value="F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001128">
        <property type="entry name" value="Cyt_P450"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017972">
        <property type="entry name" value="Cyt_P450_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002401">
        <property type="entry name" value="Cyt_P450_E_grp-I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036396">
        <property type="entry name" value="Cyt_P450_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00067">
        <property type="entry name" value="p450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00463">
        <property type="entry name" value="EP450I"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00385">
        <property type="entry name" value="P450"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48264">
        <property type="entry name" value="SSF48264"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00086">
        <property type="entry name" value="CYTOCHROME_P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0349">Heme</keyword>
    <keyword evidence="1" id="KW-0408">Iron</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="1" id="KW-0503">Monooxygenase</keyword>
    <keyword evidence="1 2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU000461"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71929.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="460" mass="51206" checksum="DC35782F75B25E1C" modified="2015-12-09" version="1">MAAVETYIPPRPSRLPPVLALLRTVWHGDGDLLSLLPGAAFSMAAGELGYSRRSIKLFNDPELVRQILLDPEGIFPKSDLMVGALEPLIGDSIFVSDGAKWRRQRAMIDPAFSKMRLTHAFGAMVGAVDDYVARLKESAARDEVLSLDRIMSELTADIICRTVFSTSLDTGISRDVFDDFAVFERGVAQVKIWRLITDPAWADIPQSEEVLAACKRIRHHLGSLIDTHMGLDAEKYDDIASAVISARDSETGEPFTRDELIDQLGVFFLAGHETTASALTWAFYLLAMCPDVLRRLRAEVDETTDGDALSFEATRALGYTRAVFRETLRLYPPITFLPRVAMQGTRIGKYKVRKGALLMISPWTLQRHGDYWPDPDRFDPDRFLPPREQEVVQGAYIPFGAGPHTCVGAGFAAVESALILARLTREFDFLPENADAVRPVARLTTRPAEQIYVQLKSHGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAZ0</accession>
    <name>A0A0M7AAZ0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF1244 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03137</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72315.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672605.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03137"/>
    <dbReference type="EnsemblBacteria" id="CTQ72315">
        <property type="protein sequence ID" value="CTQ72315"/>
        <property type="gene ID" value="LAX5112_03137"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3340.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023163">
        <property type="entry name" value="SMc04008-like_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036810">
        <property type="entry name" value="SMc04008-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06844">
        <property type="entry name" value="DUF1244"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF158757">
        <property type="entry name" value="SSF158757"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF1244" evidence="1">
        <location>
            <begin position="27"/>
            <end position="93"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF06844"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72315.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="96" mass="10951" checksum="E123A73C41E21F81" modified="2015-12-09" version="1">MDEQTKIELEAAVFRRLVEHLRGRTDVQNIDMMNLAGFCRNCLSNWYADAAAEKDMSLDKDAAREIVYGMPYGDWKAKYQTEATAAQKAAFDKNKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AB51</accession>
    <name>A0A0M7AB51_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Quinol dehydrogenase membrane component</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">LAX5112_03051</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72099.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03051"/>
    <dbReference type="EnsemblBacteria" id="CTQ72099">
        <property type="protein sequence ID" value="CTQ72099"/>
        <property type="gene ID" value="LAX5112_03051"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017896">
        <property type="entry name" value="4Fe4S_Fe-S-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017900">
        <property type="entry name" value="4Fe4S_Fe_S_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014116">
        <property type="entry name" value="Cyt_c_oxidase_cbb3_FixG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032879">
        <property type="entry name" value="FixG_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013783">
        <property type="entry name" value="Ig-like_fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13746">
        <property type="entry name" value="Fer4_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12801">
        <property type="entry name" value="Fer4_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11614">
        <property type="entry name" value="FixG_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02745">
        <property type="entry name" value="ccoG_rdxA_fixG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00198">
        <property type="entry name" value="4FE4S_FER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51379">
        <property type="entry name" value="4FE4S_FER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0408">Iron</keyword>
    <keyword evidence="3" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="32"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="88"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="162"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="198"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="346"/>
            <end position="364"/>
        </location>
    </feature>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="5">
        <location>
            <begin position="262"/>
            <end position="291"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51379"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ72099.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="488" mass="55613" checksum="99F6B2F131DA4F0E" modified="2015-12-09" version="1">MSTDTETHEGGHDDDEWFASAKKIYPMATHGLFRRIKWALLFITLGIYYFLPFIRYDRGPNAPNQAVLVDMDNARGYFFFIEIWPQEVYYLTGLLIIAAVTLFLMNAVAGRIWCGYLCPQTVWTDLFLWVERKIEGDRRERIALDREPWSASKVGKRATKHFFWLMIAWWTGGAWVLYFNDAPTLVWQLLTFQAPMVAYMWIGILTATTYLLAGFMREQVCIYMCPWPRIQAALTDEKALNVTYRWDRGEPRGSLKHNKGLEAQGLPAGDCIDCYQCFQVCPTGVDIRKGPQLDCIQCGLCIDACDNIMTKVGKPTGLIAYDTDENIERRIEGKEPVYEIVRVRTVIYAAVIAVVGIIMLAALLTRDFADISVLHDRNPVYVEQSDGSVRNGYTVRLSNKRRHDRHFMLHVEGMPPNTQVEAVGVTETFAGRPIVQVGPDTTREIRVLVTSPPWEKMPHSTPVTFRITESVMGEVITAKDTFKAPDPD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABB9</accession>
    <name>A0A0M7ABB9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Dehydrosqualene synthase</fullName>
            <ecNumber evidence="2">2.5.1.96</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">crtM</name>
        <name evidence="2" type="ORF">LAX5112_02973</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.5.1.96" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71921.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672479.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02973"/>
    <dbReference type="EnsemblBacteria" id="CTQ71921">
        <property type="protein sequence ID" value="CTQ71921"/>
        <property type="gene ID" value="LAX5112_02973"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004311">
        <property type="term" value="F:farnesyltranstransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016117">
        <property type="term" value="P:carotenoid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="CDD" id="cd00683">
        <property type="entry name" value="Trans_IPPS_HH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.600.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008949">
        <property type="entry name" value="Isoprenoid_synthase_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002060">
        <property type="entry name" value="Squ/phyt_synthse"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019845">
        <property type="entry name" value="Squalene/phytoene_synthase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044843">
        <property type="entry name" value="Trans_IPPS_bact-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033904">
        <property type="entry name" value="Trans_IPPS_HH"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00494">
        <property type="entry name" value="SQS_PSY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDG01212">
        <property type="entry name" value="Phytoene_synthase_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48576">
        <property type="entry name" value="SSF48576"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01044">
        <property type="entry name" value="SQUALEN_PHYTOEN_SYN_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01045">
        <property type="entry name" value="SQUALEN_PHYTOEN_SYN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71921.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="394" mass="43444" checksum="A11131AB650890AC" modified="2015-12-09" version="1">MSDITPDNLESFVPFATTTSRQRARAAQASGSLSHQADLRECAAAIRKGSKSFHLASLILPAETRKAALSLYAFCRHSDDLIDDPRADRTALEQLKDRLDLVYRGTPAPYACDRAFARTVQAYGIPKCVPDALLDGFAMDLGERHYKTIAQVKDYATCVAATVGLMMSLVMRVGDKDALARAADLGIAMQLTNIARDVGEDARNGRLYLPEDWMRDAGLDPEAFLASPKFSPELREVVLRLLAEAAHHYELGHAGIAALPENCRHAIRTAALVYQEIGTEIAVNNYDSVTRRAHTRKIKKLSLLLKARLPQLEQSNAAHLYMQRPADPSAAHLVSACANSFETHARLRKAANASVADDSNMEWVLGVMIKLQAESRAHHRSQKLAMQRRSQDSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABZ3</accession>
    <name>A0A0M7ABZ3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">CENP-V/GFA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_03167</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the Gfa family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72399.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451028.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03167"/>
    <dbReference type="EnsemblBacteria" id="CTQ72399">
        <property type="protein sequence ID" value="CTQ72399"/>
        <property type="gene ID" value="LAX5112_03167"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016846">
        <property type="term" value="F:carbon-sulfur lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006913">
        <property type="entry name" value="CENP-V/GFA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011057">
        <property type="entry name" value="Mss4-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04828">
        <property type="entry name" value="GFA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51316">
        <property type="entry name" value="SSF51316"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51891">
        <property type="entry name" value="CENP_V_GFA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CENP-V/GFA" evidence="3">
        <location>
            <begin position="2"/>
            <end position="116"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005495"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51891"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ72399.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="127" mass="14306" checksum="FCA073FB24E3E4D8" modified="2015-12-09" version="1">MLKGRCDCGKVRFEVPEVRKTVTICHCGQCRRSSGHTWASTHAPFEELQFTTDEGLTWYESSDFAKRGFCKFCGSSLFYRMNTEDGIGIAAGCLESPTGLEIGKHIFVKDKGDYYDITDDAPQIQKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AD52</accession>
    <name>A0A0M7AD52_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Putative two-component response-regulatory protein YehT</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_03226</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72561.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672654.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03226"/>
    <dbReference type="EnsemblBacteria" id="CTQ72561">
        <property type="protein sequence ID" value="CTQ72561"/>
        <property type="gene ID" value="LAX5112_03226"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007492">
        <property type="entry name" value="LytTR_DNA-bd_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04397">
        <property type="entry name" value="LytTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00850">
        <property type="entry name" value="LytTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50930">
        <property type="entry name" value="HTH_LYTTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809248" evidence="2">
        <location>
            <begin position="22"/>
            <end position="298"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="37"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="68"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="domain" description="HTH LytTR-type" evidence="3">
        <location>
            <begin position="193"/>
            <end position="283"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50930"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ72561.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="298" mass="32766" checksum="E56E3139DDD72004" modified="2015-12-09" version="1">MTRHGSLTLFGLTLAAAGLLAANQQTRPEGWPVIGVYGYWLVRIGIESTLFIAFLQLLSLLPRIANHTLWAICLAALASYIPFVLSVTALDIVLGLPELDATTLGEAGSAIRLGAFLQELVYLLDNHIFLCAVLSIPMVLQACWIPAQLYPPIAKQSGPADMLTVERSGLAITSPDNAPTKTSFLESLSPPFTDRILRAEAQEHYVKLVGPNDTQMVLYRFSDILRELPEKTGMQVHRSHWIAHEAIQQVHKEGNNTRLVLKDGTQIPVSRRYVSTVRAWAKQNLGQPTADVAAQINK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADB3</accession>
    <name>A0A0M7ADB3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Taurine import ATP-binding protein TauB</fullName>
            <ecNumber evidence="6">3.6.3.36</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">tauB_2</name>
        <name evidence="6" type="ORF">LAX5112_03342</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.36" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72869.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008189247.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03342"/>
    <dbReference type="EnsemblBacteria" id="CTQ72869">
        <property type="protein sequence ID" value="CTQ72869"/>
        <property type="gene ID" value="LAX5112_03342"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="5"/>
            <end position="243"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="41"/>
            <end position="48"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ72869.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="263" mass="28777" checksum="4F9736468DA10942" modified="2015-12-09" version="1">MTGFVDLRDVRLTYGGAADGTLALDGLTMSVKKGEFAAVVGPSGCGKSTLMKLATGLIAPQNGTIEVAGHEVDGPVSVAGMAFQNPSMLPWRSSLANVMLPLEIVQPHRSKFRSEKQAYTAKAEALLELVGLKGFGDKYPWQLSGGMQQRANLCRALIHDPALLMLDEPFGALDAFTREELWQVMRDLHAEKGFTTILVTHDLREAVFLADKVFVMSARPGTIIREREVPFERPRPIELTYESAFNDIVHELRDLIANARAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEC4</accession>
    <name>A0A0M7AEC4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03298</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72782.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72782">
        <property type="protein sequence ID" value="CTQ72782"/>
        <property type="gene ID" value="LAX5112_03298"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ72782.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="38" mass="4434" checksum="D2CECB4808C07CE5" modified="2015-12-09" version="1">METAEKNRKDSQNRVLNFESLSESLPQIWLLLTNAPFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEY4</accession>
    <name>A0A0M7AEY4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Ornithine/acetylornithine aminotransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03397</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72992.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03397"/>
    <dbReference type="EnsemblBacteria" id="CTQ72992">
        <property type="protein sequence ID" value="CTQ72992"/>
        <property type="gene ID" value="LAX5112_03397"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008483">
        <property type="term" value="F:transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033186">
        <property type="entry name" value="HerA_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05872">
        <property type="entry name" value="DUF853"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="DUF853" evidence="2">
        <location>
            <begin position="21"/>
            <end position="523"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="436"/>
            <end position="499"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="436"/>
            <end position="495"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF05872"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ72992.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="527" mass="58269" checksum="02EE076576B684E3" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEY6</accession>
    <name>A0A0M7AEY6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03287</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72760.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672713.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72760">
        <property type="protein sequence ID" value="CTQ72760"/>
        <property type="gene ID" value="LAX5112_03287"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ72760.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="109" mass="11943" checksum="7680B43CA229B98E" modified="2015-12-09" version="1">MFIENLKDPKAAKLLSSDIAKLQGLLDDLKSLRAGAYPSHDTLCNAPFLDDYRVITREIAALSGDVNGHPTISGTNEPMVSSPLFVVLKDIGAARTLSRWYRLGERASR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AF59</accession>
    <name>A0A0M7AF59_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">NADH-quinone oxidoreductase subunit I</fullName>
            <ecNumber evidence="7">7.1.1.-</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">NADH dehydrogenase I subunit I</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">NDH-1 subunit I</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7 9" type="primary">nuoI</name>
        <name evidence="9" type="ORF">LAX5112_03481</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>a quinone + 5 H(+)(in) + NADH = a quinol + 4 H(+)(out) + NAD(+)</text>
            <dbReference type="Rhea" id="RHEA:57888"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:24646"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:132124"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="7">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
        <text evidence="7">Binds 2 [4Fe-4S] clusters per subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cell membrane</location>
            <topology evidence="7">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the complex I 23 kDa subunit family.</text>
    </comment>
    <dbReference type="EC" id="7.1.1.-" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73267.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008193406.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03481"/>
    <dbReference type="EnsemblBacteria" id="CTQ73267">
        <property type="protein sequence ID" value="CTQ73267"/>
        <property type="gene ID" value="LAX5112_03481"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050136">
        <property type="term" value="F:NADH dehydrogenase (quinone) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048038">
        <property type="term" value="F:quinone binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01351">
        <property type="entry name" value="NDH1_NuoI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017896">
        <property type="entry name" value="4Fe4S_Fe-S-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017900">
        <property type="entry name" value="4Fe4S_Fe_S_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010226">
        <property type="entry name" value="NADH_quinone_OxRdtase_chainI"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10849">
        <property type="entry name" value="PTHR10849"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12838">
        <property type="entry name" value="Fer4_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01971">
        <property type="entry name" value="NuoI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00198">
        <property type="entry name" value="4FE4S_FER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51379">
        <property type="entry name" value="4FE4S_FER_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 7" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="7" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 7" id="KW-0408">Iron</keyword>
    <keyword evidence="5 7" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="7" id="KW-0472">Membrane</keyword>
    <keyword evidence="2 7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-0520">NAD</keyword>
    <keyword evidence="9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-0874">Quinone</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <keyword evidence="7" id="KW-1278">Translocase</keyword>
    <keyword evidence="6 7" id="KW-0830">Ubiquinone</keyword>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="8">
        <location>
            <begin position="51"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="8">
        <location>
            <begin position="92"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="61"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="64"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="67"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="71"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="101"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="104"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="107"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="111"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>1</label>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023075"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01351"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51379"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ73267.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="161" mass="18701" checksum="CB07F05A0028B468" modified="2015-12-09" version="1">MVGQTVKSLFLQEFVSAFFLAMRYFFKPKPTVNYPFEKGPVSPRFRGEHALRRYPNGEERCIACKLCEAICPAQAITIEAGPRRNDGTRRTTRYDIDMVKCIYCGFCQEACPVDAIVEGPNFEFATETREELYYDKEKLLANGDRWEREIARNIEMDAPYR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFA2</accession>
    <name>A0A0M7AFA2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03671</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73825.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673010.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03671"/>
    <dbReference type="EnsemblBacteria" id="CTQ73825">
        <property type="protein sequence ID" value="CTQ73825"/>
        <property type="gene ID" value="LAX5112_03671"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="80"/>
            <end position="98"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73825.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="108" mass="12233" checksum="C28BCAA1F62B2311" modified="2015-12-09" version="1">MISIVKFLLRVLGFGLLAIAIVVGIADASRSIAESQIMFKPLGQLWFEMSPETLNLSQAVIQRYVHPIVWDPMLQTVLTWPAWAVFAGVGVLFLLMGARRQKRRFRYA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFJ3</accession>
    <name>A0A0M7AFJ3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Polynucleotide kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03524</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73381.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672894.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03524"/>
    <dbReference type="EnsemblBacteria" id="CTQ73381">
        <property type="protein sequence ID" value="CTQ73381"/>
        <property type="gene ID" value="LAX5112_03524"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0418">Kinase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ73381.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="159" mass="17544" checksum="E2C16CC9592B3E91" modified="2015-12-09" version="1">MTPGHLHILCGKIASGKSTLAGNLSRQPATVLISEDTWLAELFGPEMSTIRDYVRVSARLRAVMEPHVIGLLEGGVSVVLDFPANTPETRVWMRRVSENSGSDHTLHYLNVSNEICKERLRARNASGGHPFSVSDEQFEAVTKYFVPPGPDEGFNVLER</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AG53</accession>
    <name>A0A0M7AG53_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Sporulation initiation inhibitor protein soj</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">soj_1</name>
        <name evidence="2" type="ORF">LAX5112_03771</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74135.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673092.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03771"/>
    <dbReference type="EnsemblBacteria" id="CTQ74135">
        <property type="protein sequence ID" value="CTQ74135"/>
        <property type="gene ID" value="LAX5112_03771"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025669">
        <property type="entry name" value="AAA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13614">
        <property type="entry name" value="AAA_31"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA_31" evidence="1">
        <location>
            <begin position="9"/>
            <end position="191"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74135.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="274" mass="29797" checksum="3263ECCCB30777EE" modified="2015-12-09" version="1">MNILPEMPRVLALANQKGGVGKTTTAINLGTALAAIGEKVLVIDLDPQGNASTGLGIEHRDRGLSTYEILSGDCAMDEAIRETAVQRLWVAPSTMDLLGLELEIASTSDRAFRLRNAIENLTHSRLFKEIGFTYILVDCPPSLNLLTINALSASHSILVPLQCEFFALEGLSQLLSTVEQVKSALNSELSIHGIVLTMYDSRNNLSSQVVADVRETMGEAVYDTIIPRNVRISEAPSYGKPALLYDLKCAGSQAYLRLASEIIQRERQLRSVAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AG76</accession>
    <name>A0A0M7AG76_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Kynurenine formamidase</fullName>
            <ecNumber evidence="1">3.5.1.9</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">kynB</name>
        <name evidence="1" type="ORF">LAX5112_03686</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.5.1.9" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ73899.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673031.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03686"/>
    <dbReference type="EnsemblBacteria" id="CTQ73899">
        <property type="protein sequence ID" value="CTQ73899"/>
        <property type="gene ID" value="LAX5112_03686"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004061">
        <property type="term" value="F:arylformamidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019441">
        <property type="term" value="P:tryptophan catabolic process to kynurenine"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.30.50">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007325">
        <property type="entry name" value="KFase/CYL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037175">
        <property type="entry name" value="KFase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006311">
        <property type="entry name" value="TAT_signal"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31118">
        <property type="entry name" value="PTHR31118"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04199">
        <property type="entry name" value="Cyclase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF102198">
        <property type="entry name" value="SSF102198"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ73899.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="273" mass="28844" checksum="971A67E9BE17E80A" modified="2015-12-09" version="1">MCDLCVIKSVKEKMLSRRDVFRAAAAGTGVAAATSIAGTLPAMAQTPAQVLDLTHELSEDFPTFGGEPGYRVEKIFDFAKDGYNLYSLSIDEHSGTHLDAPLHFSADGQSVAEIPVDKLVTPLCIIDIKERAADNPDAQVTPEDLKAWVAAHGDIPNGACVAMNSGWSAHASSDMFRNADANGVMHFPGFHIEAVQMLMEEADVAGLAVDSLSLDHGISKDFGAHYAWLPSGRWGLECIAKLDALPPSGATLIVGAPKNRGGTGGPSRVMAMV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AH65</accession>
    <name>A0A0M7AH65_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Deacetylases, including yeast histone deacetylase and acetoin utilization protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_03718</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ73987.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03718"/>
    <dbReference type="EnsemblBacteria" id="CTQ73987">
        <property type="protein sequence ID" value="CTQ73987"/>
        <property type="gene ID" value="LAX5112_03718"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012683">
        <property type="entry name" value="CHP02302_TM"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13779">
        <property type="entry name" value="DUF4175"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02302">
        <property type="entry name" value="aProt_lowcomp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="48"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="73"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="169"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="669"/>
            <end position="699"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="736"/>
            <end position="768"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="785"/>
            <end position="825"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="528"/>
            <end position="579"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="752"/>
            <end position="766"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ73987.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="863" mass="96470" checksum="C464BF4E359B5DDC" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIA8</accession>
    <name>A0A0M7AIA8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Multidrug transporter MdtA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">mdtA_3</name>
        <name evidence="5" type="ORF">LAX5112_03923</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74619.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451898.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03923"/>
    <dbReference type="EnsemblBacteria" id="CTQ74619">
        <property type="protein sequence ID" value="CTQ74619"/>
        <property type="gene ID" value="LAX5112_03923"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032317">
        <property type="entry name" value="HlyD_D23"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006143">
        <property type="entry name" value="RND_pump_MFP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16576">
        <property type="entry name" value="HlyD_D23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01730">
        <property type="entry name" value="RND_mfp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809465" evidence="3">
        <location>
            <begin position="24"/>
            <end position="364"/>
        </location>
    </feature>
    <feature type="domain" description="HlyD_D23" evidence="4">
        <location>
            <begin position="71"/>
            <end position="275"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="105"/>
            <end position="132"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF16576"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ74619.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="364" mass="39443" checksum="930B5B7916695AAD" modified="2015-12-09" version="1">MLALLKTPAARVAAIVLSAGLLAACQDDAIDPIAEAEAKLHAAPRPAKIFTVSDQLGLLERRFAGRVAAVQTVDLSFQVAGRIVELPVLESQQAKKGDLIARLDTADYDRALREATINVEQAKRELDRLATLRDRNVIAVSAFDAQQDKHDLAVEALKEAKLDLEYSELRAPFDGIVSLRLIDNFTTVSVGTPVVRMHDVSEIQVDINVAEALFGRVRDTEVVSIEAKFPAYGDKYFPLIYREHSSQVDDVTQTYRVSLAMPRKGADQLYPGMTASVRVKFLPEGLSLGEMFLIPTGSVAVDGDGQSYVWIYDDGSDAVSKRKVEVGTVMGDYIPVSSGLGAGEDIVAAGAAFLSDGQIVRPLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJ03</accession>
    <name>A0A0M7AJ03_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Nitrogen regulatory protein</fullName>
            <ecNumber evidence="2">2.7.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ptsN</name>
        <name evidence="2" type="ORF">LAX5112_03644</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.7.1.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73743.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672987.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03644"/>
    <dbReference type="EnsemblBacteria" id="CTQ73743">
        <property type="protein sequence ID" value="CTQ73743"/>
        <property type="gene ID" value="LAX5112_03644"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008982">
        <property type="term" value="F:protein-N(PI)-phosphohistidine-sugar phosphotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009401">
        <property type="term" value="P:phosphoenolpyruvate-dependent sugar phosphotransferase system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00211">
        <property type="entry name" value="PTS_IIA_fru"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.930.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016152">
        <property type="entry name" value="PTrfase/Anion_transptr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002178">
        <property type="entry name" value="PTS_EIIA_type-2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006320">
        <property type="entry name" value="PTS_Nitro_regul"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00359">
        <property type="entry name" value="PTS_EIIA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55804">
        <property type="entry name" value="SSF55804"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01419">
        <property type="entry name" value="nitro_reg_IIA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51094">
        <property type="entry name" value="PTS_EIIA_TYPE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00372">
        <property type="entry name" value="PTS_EIIA_TYPE_2_HIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PTS EIIA type-2" evidence="1">
        <location>
            <begin position="5"/>
            <end position="148"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51094"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73743.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="155" mass="16657" checksum="5FC7B06E23F07239" modified="2015-12-09" version="1">MDLSDLLSKDAVISKLKAKSKKQAIQELAAKAAELTGLSEREVFDTLLQRERLGSTGVGQGIAIPHGKLIRLDRLVGVFARLEKPVDFDSLDEEPVDLVFLLLAPEGAGADHLKALARIARQLRDATVTEGIRSAAEADDIYELVTQPIASSNAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJD6</accession>
    <name>A0A0M7AJD6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">UPF0145 protein LAX5112_03684</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03684</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the UPF0145 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ73893.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673029.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03684"/>
    <dbReference type="EnsemblBacteria" id="CTQ73893">
        <property type="protein sequence ID" value="CTQ73893"/>
        <property type="gene ID" value="LAX5112_03684"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00338">
        <property type="entry name" value="UPF0145"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002765">
        <property type="entry name" value="UPF0145"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035439">
        <property type="entry name" value="UPF0145_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34068">
        <property type="entry name" value="PTHR34068"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01906">
        <property type="entry name" value="YbjQ_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF117782">
        <property type="entry name" value="SSF117782"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010751"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00338"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ73893.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="105" mass="11126" checksum="DE25E96AD3F64A62" modified="2015-12-09" version="1">MLVTTTPTIQGKDLDYKGLVTGEAILGANLFKDIFAGIRDIVGGRSAAYEEELAKARQIAVEEMCQQAQRLGGNAVIGVDIDYETVGQNGSMLMVSATGTAVTMR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJS0</accession>
    <name>A0A0M7AJS0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Peptidyl-prolyl cis-trans isomerase SurA</fullName>
            <ecNumber evidence="3">5.2.1.8</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">surA</name>
        <name evidence="3" type="ORF">LAX5112_03876</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="5.2.1.8" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74480.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_050776213.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03876"/>
    <dbReference type="EnsemblBacteria" id="CTQ74480">
        <property type="protein sequence ID" value="CTQ74480"/>
        <property type="gene ID" value="LAX5112_03876"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003755">
        <property type="term" value="F:peptidyl-prolyl cis-trans isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015391">
        <property type="entry name" value="SurA_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027304">
        <property type="entry name" value="Trigger_fact/SurA_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09312">
        <property type="entry name" value="SurA_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF109998">
        <property type="entry name" value="SSF109998"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0413">Isomerase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809407" evidence="1">
        <location>
            <begin position="27"/>
            <end position="306"/>
        </location>
    </feature>
    <feature type="domain" description="SurA_N" evidence="2">
        <location>
            <begin position="28"/>
            <end position="134"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF09312"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ74480.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="306" mass="33959" checksum="82F9E509BB8444A4" modified="2015-12-09" version="1">MRNRFVILSALVALLLAAPIAPSADAAIKVIVNDVPITDYDITQRARLITLTLRKSASVARREAVQELIDDQVKVGEATRMGMSVSDSEVDNAYANIARNVKLTPARLTQALGQGGVRAETLKKRLRAQLIWGKLVRARFSGGVDVDESDIIAALRKTDEEDRATSIEYDLQRVIVVVPKNSSNGFKSQRRREIAQMRKAVSSCEDMGSVLGQYKEVVVQPIGRRLETEIPPNIIDQVKKLGPGKLTDPNPTPVGFEMIAICGKREIQSDIAMRTKLENELRAKEGESQARRLLMDAKRRSTIIYR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJZ0</accession>
    <name>A0A0M7AJZ0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Membrane fusogenic activity</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04143</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75199.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008191654.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04143"/>
    <dbReference type="EnsemblBacteria" id="CTQ75199">
        <property type="protein sequence ID" value="CTQ75199"/>
        <property type="gene ID" value="LAX5112_04143"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007475">
        <property type="entry name" value="UbiK"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04380">
        <property type="entry name" value="BMFP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="53"/>
            <end position="80"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75199.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="88" mass="9762" checksum="40882FDA3D26A135" modified="2015-12-09" version="1">MTQGPNRLLDDFAKLMTDAAGVAQGARREVETAFRAQAERFLSDMDLVSREEHEAVKEMAVRALDRLDEVEERLAALEGTGEKAPDKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AK37</accession>
    <name>A0A0M7AK37_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative enzyme related to lactoylglutathione lyase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03913</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74590.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673215.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03913"/>
    <dbReference type="EnsemblBacteria" id="CTQ74590">
        <property type="protein sequence ID" value="CTQ74590"/>
        <property type="gene ID" value="LAX5112_03913"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.180.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029068">
        <property type="entry name" value="Glyas_Bleomycin-R_OHBP_Dase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004360">
        <property type="entry name" value="Glyas_Fos-R_dOase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037523">
        <property type="entry name" value="VOC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00903">
        <property type="entry name" value="Glyoxalase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54593">
        <property type="entry name" value="SSF54593"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51819">
        <property type="entry name" value="VOC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="VOC" evidence="1">
        <location>
            <begin position="1"/>
            <end position="123"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51819"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74590.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="127" mass="13795" checksum="A5DC69353ACEB21B" modified="2015-12-09" version="1">MLSGVCIGTNDMAKAAEFYDAVFATIGMTPEFQGEHERGYAETDGRVTVFIVTPYNNKPATFGNGTQFIFHAADKDGVRAFHSAALENGGTDEGAPGPRDYHPDYYGAYIRDPDGNKLHISISLNDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AK99</accession>
    <name>A0A0M7AK99_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative peptidase</fullName>
            <ecNumber evidence="3">3.4.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03990</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.4.-.-" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74826.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673282.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03990"/>
    <dbReference type="EnsemblBacteria" id="CTQ74826">
        <property type="protein sequence ID" value="CTQ74826"/>
        <property type="gene ID" value="LAX5112_03990"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.350.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029149">
        <property type="entry name" value="Creatin/AminoP/Spt16_NTD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036005">
        <property type="entry name" value="Creatinase/aminopeptidase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000587">
        <property type="entry name" value="Creatinase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000994">
        <property type="entry name" value="Pept_M24"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01321">
        <property type="entry name" value="Creatinase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00557">
        <property type="entry name" value="Peptidase_M24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53092">
        <property type="entry name" value="SSF53092"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55920">
        <property type="entry name" value="SSF55920"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Creatinase_N" evidence="2">
        <location>
            <begin position="14"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_M24" evidence="1">
        <location>
            <begin position="163"/>
            <end position="360"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00557"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01321"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ74826.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="378" mass="41262" checksum="D0EE1E2BB01CDBE4" modified="2015-12-09" version="1">MSEAVFPVTEFEYRADRAQRLMREQGLDALLFTTEAEVRYFTGFRTLFWQSPARPWFCILSRTGKPIAIIPHIGAHLMASTWVDDIRTFAAPHPTDEGVGLLSDALKPYAVVGMPMGRESSLRMPLLDFERVKANLPGAEFRDASALVQAVRRIKSETEIAIHREICQIASRSFESARALFHEGQSLKEAFRSFKIDLLERGADDVPYLVGGAGPGGYGDVISPPTDAPLNAGDVLMLDTGAVKNGYFCDFDRNFAIGHASNAVRQAHRKLVEAANSAAAIARPGKTCADLFNAMTDVLGQSDCDVGRMGHGLGIQLTETPSLTAFDTTVLQERMVLTLEPGLDLGQGKMMVHEENIVIRDGAPEFLSTPADPDIPVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKA0</accession>
    <name>A0A0M7AKA0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">LIV-I protein F</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">livF_11</name>
        <name evidence="6" type="ORF">LAX5112_04292</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000022">
        <property type="protein sequence ID" value="CTQ75585.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673524.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000022.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04292"/>
    <dbReference type="EnsemblBacteria" id="CTQ75585">
        <property type="protein sequence ID" value="CTQ75585"/>
        <property type="gene ID" value="LAX5112_04292"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="5"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="37"/>
            <end position="44"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ75585.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="229" mass="24384" checksum="9C0E6828336E5024" modified="2015-12-09" version="1">MSALLALSNVTASYGPSQALFDVSLSIGEGQVVALMGRNGMGKSTTVKTICGMLPSGGEIRFKDKVIGGLPSHKVARLGVGLVPEGRRCFADLSVEENLTAAARPGTWDFAKVAELFPRLAERRNQKAASLSGGEQQMLAIGRALMTNPILVILDEATEGLAPIIRQEIWAAISHLKNSSGLSILLVDKSLKELQQVADQGVILERGRTVWSGRMADLDAETGEKYLGI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKB9</accession>
    <name>A0A0M7AKB9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04075</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ74991.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008196338.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74991">
        <property type="protein sequence ID" value="CTQ74991"/>
        <property type="gene ID" value="LAX5112_04075"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="59"/>
            <end position="123"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74991.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="126" mass="15141" checksum="0F89AA2D55F1F473" modified="2015-12-09" version="1">MARNSREIERMFKMQEQILKLSSWILQDLDSQAHKLNEKERRILLALSNGDLAQHDRFIANAAERLRRIIEEMARITAAREKVNAEFERQRHMLKTMSERLAVMRGEEQRANDERELQEYLDRRYG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKE6</accession>
    <name>A0A0M7AKE6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 8">Flagellar motor switch protein FliN</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">fliN_3</name>
        <name evidence="11" type="ORF">LAX5112_04201</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cell membrane</location>
            <topology evidence="8">Peripheral membrane protein</topology>
            <orientation evidence="8">Cytoplasmic side</orientation>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="8">Bacterial flagellum basal body</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
            <orientation evidence="1">Cytoplasmic side</orientation>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the FliN/MopA/SpaO family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75359.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008192134.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04201"/>
    <dbReference type="EnsemblBacteria" id="CTQ75359">
        <property type="protein sequence ID" value="CTQ75359"/>
        <property type="gene ID" value="LAX5112_04201"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009425">
        <property type="term" value="C:bacterial-type flagellum basal body"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003774">
        <property type="term" value="F:cytoskeletal motor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071973">
        <property type="term" value="P:bacterial-type flagellum-dependent cell motility"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006935">
        <property type="term" value="P:chemotaxis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.330.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012826">
        <property type="entry name" value="FliN"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001543">
        <property type="entry name" value="FliN-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001172">
        <property type="entry name" value="FliN_T3SS_HrcQb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036429">
        <property type="entry name" value="SpoA-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01052">
        <property type="entry name" value="FliMN_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00956">
        <property type="entry name" value="FLGMOTORFLIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101801">
        <property type="entry name" value="SSF101801"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02480">
        <property type="entry name" value="fliN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0975">Bacterial flagellum</keyword>
    <keyword evidence="4 8" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="11" id="KW-0966">Cell projection</keyword>
    <keyword evidence="5 8" id="KW-0145">Chemotaxis</keyword>
    <keyword evidence="11" id="KW-0969">Cilium</keyword>
    <keyword evidence="6 8" id="KW-0283">Flagellar rotation</keyword>
    <keyword evidence="11" id="KW-0282">Flagellum</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FliMN_C" evidence="10">
        <location>
            <begin position="37"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004287"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009226"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00021897"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022500"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022779"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU362074"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF01052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ75359.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="111" mass="12189" checksum="035C5FD574481FEE" modified="2015-12-09" version="1">MSDEQDTNIPLDELEAPDRAGEQEEIPHPQSAADLEAVFDVPVRISAVLGHSKMHVSDLLKLASGTVLELDRKVGEAIDIYVNDRLVARGEVVLVEDKLGVTMTEIIKTDR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKG4</accession>
    <name>A0A0M7AKG4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 6">Flagellar P-ring protein</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5 6">Basal body P-ring protein</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="primary">flgI_2</name>
        <name evidence="6" type="synonym">flgI</name>
        <name evidence="7" type="ORF">LAX5112_04096</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 6">Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">The basal body constitutes a major portion of the flagellar organelle and consists of four rings (L,P,S, and M) mounted on a central rod.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 6">Bacterial flagellum basal body</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the FlgI family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ75041.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673360.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04096"/>
    <dbReference type="EnsemblBacteria" id="CTQ75041">
        <property type="protein sequence ID" value="CTQ75041"/>
        <property type="gene ID" value="LAX5112_04096"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009428">
        <property type="term" value="C:bacterial-type flagellum basal body, distal rod, P ring"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030288">
        <property type="term" value="C:outer membrane-bounded periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005198">
        <property type="term" value="F:structural molecule activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071973">
        <property type="term" value="P:bacterial-type flagellum-dependent cell motility"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00416">
        <property type="entry name" value="FlgI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001782">
        <property type="entry name" value="Flag_FlgI"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30381">
        <property type="entry name" value="PTHR30381"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02119">
        <property type="entry name" value="FlgI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01010">
        <property type="entry name" value="FLGPRINGFLGI"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6" id="KW-0975">Bacterial flagellum</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="6">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5008992016" description="Flagellar P-ring protein" evidence="6">
        <location>
            <begin position="20"/>
            <end position="365"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002591"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00019515"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023143"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00032344"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00416"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ75041.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="365" mass="38633" checksum="9430071001857FDF" modified="2015-12-09" version="1" precursor="true">MFRMFICLLAVLTAVPATAMVRIKDIATLQGVRDNQLVGYGLVIGLKGSGDTLRNSPFTEQSLQSMLDSLGVNVRDTRLRTRNVAAVVVTAEMPSFIGKGSSIDISVSSLGDATSLAGGTLVATPLLGADGQIYAVAQGPVAVSGFAELGAAESLTQGIPTVGRIPNGGLIERNLPAKFSQIPDLVLELSNPDFKTAIRITDAINRYTRERYGVRVATERDYRSVDLTPPPKVSLTRFIAEIESIRVRPDQSAKVVIDERTGTVVIGKDVQISTVAITHGNLTVRISEAPEVSQPAPFSQGETVVVPRTYVDAQETGGRLAVVGGTDLPTLVRGLNRIGLRPTGIIAILQAIKTAGALQAELVVQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKN7</accession>
    <name>A0A0M7AKN7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">3-isopropylmalate dehydratase</fullName>
            <ecNumber evidence="5">4.2.1.33</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="primary">leuC_2</name>
        <name evidence="15" type="ORF">LAX5112_04329</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>(2R,3S)-3-isopropylmalate = (2S)-2-isopropylmalate</text>
            <dbReference type="Rhea" id="RHEA:32287"/>
            <dbReference type="ChEBI" id="CHEBI:1178"/>
            <dbReference type="ChEBI" id="CHEBI:35121"/>
            <dbReference type="EC" id="4.2.1.33"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="4">Amino-acid biosynthesis; L-leucine biosynthesis; L-leucine from 3-methyl-2-oxobutanoate: step 2/4.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.33" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000022">
        <property type="protein sequence ID" value="CTQ75688.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673548.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000022.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04329"/>
    <dbReference type="EnsemblBacteria" id="CTQ75688">
        <property type="protein sequence ID" value="CTQ75688"/>
        <property type="gene ID" value="LAX5112_04329"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00048">
        <property type="reaction ID" value="UER00071"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003861">
        <property type="term" value="F:3-isopropylmalate dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009098">
        <property type="term" value="P:leucine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd01583">
        <property type="entry name" value="IPMI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.499.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004430">
        <property type="entry name" value="3-IsopropMal_deHydase_lsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015931">
        <property type="entry name" value="Acnase/IPM_dHydase_lsu_aba_1/3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001030">
        <property type="entry name" value="Acoase/IPM_deHydtase_lsu_aba"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018136">
        <property type="entry name" value="Aconitase_4Fe-4S_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036008">
        <property type="entry name" value="Aconitase_4Fe-4S_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033941">
        <property type="entry name" value="IPMI_cat"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00330">
        <property type="entry name" value="Aconitase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00415">
        <property type="entry name" value="ACONITASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53732">
        <property type="entry name" value="SSF53732"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00170">
        <property type="entry name" value="leuC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00450">
        <property type="entry name" value="ACONITASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01244">
        <property type="entry name" value="ACONITASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="8" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="13" id="KW-0100">Branched-chain amino acid biosynthesis</keyword>
    <keyword evidence="10" id="KW-0408">Iron</keyword>
    <keyword evidence="11" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="6" id="KW-0432">Leucine biosynthesis</keyword>
    <keyword evidence="12 15" id="KW-0456">Lyase</keyword>
    <keyword evidence="9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aconitase" evidence="14">
        <location>
            <begin position="9"/>
            <end position="454"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00002695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00004729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00011998"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022430"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF00330"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="CTQ75688.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="468" mass="49756" checksum="15A3D651461A8A71" modified="2015-12-09" version="1">MTAATTLLDKLWSLHEVLTREDGTSLLWVDRHLVHEGSHHAFAKLAERGAAVAEPALTFAVVDHYAPTRHREHIADPKIRRMIETLRSNATQHSLRLFDLMDPAQGIVHVVGPEQGLTLPGLLVNCGDSHTSTHGAFGALAFGIGATEVAHVLATQTVWQKKPAAMRIVVDGKLAEGISAKDIALNWIAKLGSDGARGHAIEYAGSAIRDLSMEGRMTLCNLSIEGGGRFGMVAPDDTTFSYIKGRPFAPNGAAFEKAQEKWQKLRSNEDAVFAKDVSLAAEEIAPTVTWGTSPEQALPVSATLPDPSRLSEEKQKAARDALDYMGLAAGRPIEGTPVDQVFLGSCTNGRIEDLRAAAAVLAGRAVKVPGLVSPGSALVRHQAEQEGLDQIFRKAGLEWSASGCSMCVGMNGDIVAPGKRCASSTNRNFRGRQGPGARTHLMSPAMVAAAAVTGTITDVRPLLKGRAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKX6</accession>
    <name>A0A0M7AKX6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Ornithine cyclodeaminase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03813</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ornithine cyclodeaminase/mu-crystallin family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74254.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673121.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03813"/>
    <dbReference type="EnsemblBacteria" id="CTQ74254">
        <property type="protein sequence ID" value="CTQ74254"/>
        <property type="gene ID" value="LAX5112_03813"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1780.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003462">
        <property type="entry name" value="ODC_Mu_crystall"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023401">
        <property type="entry name" value="ODC_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13812">
        <property type="entry name" value="PTHR13812"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02423">
        <property type="entry name" value="OCD_Mu_crystall"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008903"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74254.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="362" mass="39790" checksum="083F6AFB25E91B36" modified="2015-12-09" version="1">MTETLHNPNPSDLAYVPFVSVDNMMRNVRAIGAETFMRGVADYIEQDFRRWESFDKKPRIPAHAPQGVIELMPASDDEYFGFKYVNGHPGNTRTGMQTVTGFGVLSQMSTGYPVLFTEMTILTALRTAANSALAAKYLAPKNSKTMAIIGNGAQSDFQCLAFKDMLGITDIRAYDIEPAASLRLARNLAHSGLNVTICKTPEDAIEGAEIITTVTADKRYATILTDNMVGSGVHINAIGGDCPGKTELHKDILLRSDIFVELPEQTREEGELQQLDADHPVTELWKVYAGKAEGRTSDTQITLFDSVGFAIEDFSALRYVNDLLPRTGHFEKLDLLADPDDPRDLYGMVLRSDASNGDDRAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALF3</accession>
    <name>A0A0M7ALF3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04256</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75487.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673489.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000021.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75487">
        <property type="protein sequence ID" value="CTQ75487"/>
        <property type="gene ID" value="LAX5112_04256"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="58"/>
            <end position="80"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75487.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="80" mass="9438" checksum="719911ADB1E39586" modified="2015-12-09" version="1">MSDTTDGECPKDSTAKYVDMNFKVKEHERQRYKLVATLLKMSMVELLRVSFREYVEKKGILPSDPPEKKKKKKKKQKKMS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALT4</accession>
    <name>A0A0M7ALT4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Peptidase Do</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04215</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75402.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04215"/>
    <dbReference type="EnsemblBacteria" id="CTQ75402">
        <property type="protein sequence ID" value="CTQ75402"/>
        <property type="gene ID" value="LAX5112_04215"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd14727">
        <property type="entry name" value="ChanN-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.42.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007314">
        <property type="entry name" value="Cofac_haem-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001478">
        <property type="entry name" value="PDZ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041489">
        <property type="entry name" value="PDZ_6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036034">
        <property type="entry name" value="PDZ_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04187">
        <property type="entry name" value="Cofac_haem_bdg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17820">
        <property type="entry name" value="PDZ_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00228">
        <property type="entry name" value="PDZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50156">
        <property type="entry name" value="SSF50156"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50106">
        <property type="entry name" value="PDZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PDZ" evidence="1">
        <location>
            <begin position="327"/>
            <end position="411"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50106"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75402.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="430" mass="46383" checksum="5B1A07ED4083AFB4" modified="2015-12-09" version="1">MVSLKDPLKRPRQPVFVAAVAGFGLLALIGLVDNPGARAAAEPQTTGTALEPELCRDVGRWIDPEAQNRLTNRDVLAGAARSQFVLLGETHTSKEDHLWQLQTLAGLYALTPELVIGFEAFPRSVQPVLDDWSAGKLSEEDFLRQTKWAEVWGYDADLYIPLFEFARQNRIPMIALNVDRNLISRVGRNGWDGVPEDAREGITTPAAALPDYARKLASVYLAAAAHRRDASEDAQTVEDVLETDGFQNFVDAQLTWDRAMAEALAQSAEANPNAVVVGIAGRGHVERGFGIPHQLTDLGVSTVTSLVPVDRERACTGLEPDLADAFFLVEERDNNAPVPTRPRLGVAIQPGPDGGLLLSEVVAGSIAEAADLTAGDIVLSAAGAELKTPSDLVDIIQRQAPGTWLPLDVDRNGELLSLIAKFPSDRDSVQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALY6</accession>
    <name>A0A0M7ALY6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Making large colonies protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">mlc_2</name>
        <name evidence="2" type="ORF">LAX5112_04487</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ROK (NagC/XylR) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ76148.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451258.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000024.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04487"/>
    <dbReference type="EnsemblBacteria" id="CTQ76148">
        <property type="protein sequence ID" value="CTQ76148"/>
        <property type="gene ID" value="LAX5112_04487"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000600">
        <property type="entry name" value="ROK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18964">
        <property type="entry name" value="PTHR18964"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00480">
        <property type="entry name" value="ROK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="SSF53067"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01125">
        <property type="entry name" value="ROK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76148.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="413" mass="44971" checksum="42CCD4041AE61D06" modified="2015-12-09" version="1">MTRKADRDQIRRQNRSIVLQALRRNGPTARIDLGKITRLSPATVTAITSDLLDQKLIISVESDEPKSHQARGRPRTLLRLNPEAAYTVCIRLSVNTMDLSLVDFAGTIASSLRTQYDSATADADSFPPVLISAIRQFIADAGISEAQVQEIGVAAQGVVETEVGLVAWSPAFSGRKIPVVAPLHQAFGADCYISNDTNMITEALHWSDPERYSGTFTVIMLDYGVGMGLYLDNHLFSGASGTAAEFGHANHIPDGALCRCGKKGCLEAYLSDYALVRSASQLPEDTDPADIKAGVEGLEKLIETADAGDENARKAFHKAGRVLGYGLARVIALIDPKRIVLTGAAMRAYTFMEKGVWEGLKDALVEDLRNNFTLDVMPWNEDFIRTGLVAQSMERLDMDFLGAQVKAPRREAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AM36</accession>
    <name>A0A0M7AM36_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Aminopyrimidine aminohydrolase</fullName>
            <ecNumber evidence="1">3.5.99.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">tenA_2</name>
        <name evidence="5" type="ORF">LAX5112_03994</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway. Thus, catalyzes the conversion of 4-amino-5-aminomethyl-2-methylpyrimidine to 4-amino-5-hydroxymethyl-2-methylpyrimidine (HMP).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>4-amino-5-aminomethyl-2-methylpyrimidine + H2O = 4-amino-5-hydroxymethyl-2-methylpyrimidine + NH4(+)</text>
            <dbReference type="Rhea" id="RHEA:31799"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16892"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="ChEBI" id="CHEBI:63416"/>
            <dbReference type="EC" id="3.5.99.2"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>H2O + thiamine = 4-amino-5-hydroxymethyl-2-methylpyrimidine + 5-(2-hydroxyethyl)-4-methylthiazole + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17509"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16892"/>
            <dbReference type="ChEBI" id="CHEBI:17957"/>
            <dbReference type="ChEBI" id="CHEBI:18385"/>
            <dbReference type="EC" id="3.5.99.2"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1">Cofactor biosynthesis; thiamine diphosphate biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the TenA family.</text>
    </comment>
    <dbReference type="EC" id="3.5.99.2" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74833.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673286.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03994"/>
    <dbReference type="EnsemblBacteria" id="CTQ74833">
        <property type="protein sequence ID" value="CTQ74833"/>
        <property type="gene ID" value="LAX5112_03994"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00060"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050334">
        <property type="term" value="F:thiaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009228">
        <property type="term" value="P:thiamine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009229">
        <property type="term" value="P:thiamine diphosphate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.910.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016084">
        <property type="entry name" value="Haem_Oase-like_multi-hlx"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026285">
        <property type="entry name" value="TenA_E"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004305">
        <property type="entry name" value="Thiaminase-2/PQQC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03070">
        <property type="entry name" value="TENA_THI-4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF003170">
        <property type="entry name" value="Pet18p"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48613">
        <property type="entry name" value="SSF48613"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0784">Thiamine biosynthesis</keyword>
    <feature type="domain" description="TENA_THI-4" evidence="4">
        <location>
            <begin position="27"/>
            <end position="233"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="2">
        <location>
            <position position="224"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="62"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="100"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="154"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRNR" id="PIRNR003170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR003170-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR003170-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF03070"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ74833.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="246" mass="27195" checksum="499545252B406375" modified="2015-12-09" version="1">MPEAFSGSFQDFLTTKNDARFTDWLAARAEPHWSAATGHAFTRAIGDGTMPDDAYVRYLIEDYTFITDLASTLGYLVAKAPSMRSKARLSGFLALLTSEENDYFLRSFETLGVSPSVYETAAQGPVTRAFADLLLTSSGKGTYAEGLACLLCAEWSYLSWGLREAQKPRPQHFYLAEWIDLHAVEGFESFVNWIREEMDAVGGALGAGEQERLAEIFTRMSMLETAFFDAAWTGEATLPADLAVRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMA4</accession>
    <name>A0A0M7AMA4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Alpha-xylosidase</fullName>
            <ecNumber evidence="4">3.2.1.177</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">yicI</name>
        <name evidence="4" type="ORF">LAX5112_04288</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the glycosyl hydrolase 31 family.</text>
    </comment>
    <dbReference type="EC" id="3.2.1.177" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000022">
        <property type="protein sequence ID" value="CTQ75572.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673521.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000022.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04288"/>
    <dbReference type="EnsemblBacteria" id="CTQ75572">
        <property type="protein sequence ID" value="CTQ75572"/>
        <property type="gene ID" value="LAX5112_04288"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061634">
        <property type="term" value="F:alpha-D-xyloside xylohydrolase"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030246">
        <property type="term" value="F:carbohydrate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1180">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011013">
        <property type="entry name" value="Gal_mutarotase_sf_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000322">
        <property type="entry name" value="Glyco_hydro_31"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025887">
        <property type="entry name" value="Glyco_hydro_31_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013780">
        <property type="entry name" value="Glyco_hydro_b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13802">
        <property type="entry name" value="Gal_mutarotas_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01055">
        <property type="entry name" value="Glyco_hydro_31"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF74650">
        <property type="entry name" value="SSF74650"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 4" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="2 4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Gal_mutarotas_2" evidence="3">
        <location>
            <begin position="147"/>
            <end position="215"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU361185"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF13802"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ75572.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="792" mass="89898" checksum="015E82802C8978BE" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMD5</accession>
    <name>A0A0M7AMD5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04209</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75390.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673450.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000021.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75390">
        <property type="protein sequence ID" value="CTQ75390"/>
        <property type="gene ID" value="LAX5112_04209"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="416"/>
            <end position="468"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="440"/>
            <end position="463"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75390.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="649" mass="68030" checksum="ADBE53A5B97609B4" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AML7</accession>
    <name>A0A0M7AML7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">3-oxoadipate enol-lactonase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04350</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75761.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673572.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000023.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75761">
        <property type="protein sequence ID" value="CTQ75761"/>
        <property type="gene ID" value="LAX5112_04350"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022742">
        <property type="entry name" value="Hydrolase_4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12146">
        <property type="entry name" value="Hydrolase_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Hydrolase_4" evidence="1">
        <location>
            <begin position="88"/>
            <end position="185"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75761.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="291" mass="33225" checksum="1ECE363E47EB0E7B" modified="2015-12-09" version="1">MFGNMVSDMMVKPHQSPMFDNPAFYGLDYEQVEFKTSDEITLRGWLIKGSTDKVIVQSHFGVQCNRAGYCPKGKGIIKPWKSNISFLRQAKYLAENGYSVLMYDLRGHGQSETGPIPWVTWGPEEAKDVIAAVDYIMARDEYKNANIGLLSICMGAASTTYAYGLDHGLADRPNIKAMIAVQPLLYDYFLDAFGMPSFLRRAGGKVTKDRIGYELGERSFLDDTHKVNVPTLVVQNQNDPWTNLDMVNKYYDGLTCEKDMMWLDIEKNRFAAYDYLGREPEKIMGWFERYL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AN86</accession>
    <name>A0A0M7AN86_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Phage portal protein, HK97 family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04393</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75876.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673610.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000023.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04393"/>
    <dbReference type="EnsemblBacteria" id="CTQ75876">
        <property type="protein sequence ID" value="CTQ75876"/>
        <property type="gene ID" value="LAX5112_04393"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006944">
        <property type="entry name" value="Phage/GTA_portal"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006427">
        <property type="entry name" value="Portal_HK97"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04860">
        <property type="entry name" value="Phage_portal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01537">
        <property type="entry name" value="portal_HK97"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ75876.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="404" mass="43717" checksum="8D5030B431ED0AA2" modified="2015-12-09" version="1">MRLKKALESLWGVDTAAELEEKASRTGPLLAIQGTAQPVWSPRDYAALAREGFAKNPVVHRAVRLLSETAAAVPLLLFEGDKELSEHPLLALLARPNAHETGADFLEALYGYLLVSGNAYLEQVPVEGVPRELYALRPDRVKVVPGPHGWPEAFDYTAAGRTVRLPAEAEDGEEAAPVRHLKLFHPLNDHYGFAPVEAAQMALDIHNAAASWNKALLDNAARPSGALIYGAGDALNLTSDQFDRLKAELEDGYQGARNAGRPLLLEGGLDWKPMGLTPKDMDFIEAKNQAAREIALAFGVPPMLLGIPGDNTYANYQEAGRALWRGAVLPLVRRTAGHFASWLGPAFGQGLRLEPDLDAIEALSSEREALWRRVGAAAFLSDDEKRQAVGYGARGSTLGEAQDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANF9</accession>
    <name>A0A0M7ANF9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Regulatory ATPase RavA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_04185</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75323.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673426.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04185"/>
    <dbReference type="EnsemblBacteria" id="CTQ75323">
        <property type="protein sequence ID" value="CTQ75323"/>
        <property type="gene ID" value="LAX5112_04185"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011703">
        <property type="entry name" value="ATPase_AAA-3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041628">
        <property type="entry name" value="ChlI/MoxR_AAA_lid"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07726">
        <property type="entry name" value="AAA_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17863">
        <property type="entry name" value="AAA_lid_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA_3" evidence="1">
        <location>
            <begin position="58"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="domain" description="AAA_lid_2" evidence="2">
        <location>
            <begin position="269"/>
            <end position="333"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07726"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF17863"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ75323.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="339" mass="36960" checksum="42B2A87D622D9AF7" modified="2015-12-09" version="1">MSVVSPANPSEEDLAAVAESAERAVERILEVKADIAKIIFGQENVVEQTLVTILAGGHGLLVGVPGLAKTKLVETLGTVLGLDARRIQFTPDLMPSDILGAEVMEQDTSGGRSFRFIPGPVFSQLLMADEINRASPRTQSALLQAMQEYHVTVAGHPHDLPRPFHVLATQNPLEQEGTYPLPEAQLDRFLMQIDVQYPDLEAERRILLETTGAEQTTAHSAITAQELMEFQQLVRRMPVGESVVESILRLVRSARPGDSDENSDLTKLIAWGPGPRASQALMLTVRARALVDGRLAPSVDDVLALAEPILQHRMALTFAARADGHTVRDVIQRVKETIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APH2</accession>
    <name>A0A0M7APH2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04707</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000028">
        <property type="protein sequence ID" value="CTQ76779.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76779">
        <property type="protein sequence ID" value="CTQ76779"/>
        <property type="gene ID" value="LAX5112_04707"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ76779.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="133" mass="15088" checksum="875A78C039D59A03" modified="2015-12-09" version="1">MPGNCRSIRRCLRLTFDHLMNADLQIHICSRRVPAIEYKVALVGGHHGDIGGHLFLVRQDSGNEFNALGILFCCIGGDSRWIEDQRRLALSRNVKCQRAVGQKLRPRVRCFGFNNSDCICRPRHPRHPGDEIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQ55</accession>
    <name>A0A0M7AQ55_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Tail protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04410</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75923.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04410"/>
    <dbReference type="EnsemblBacteria" id="CTQ75923">
        <property type="protein sequence ID" value="CTQ75923"/>
        <property type="gene ID" value="LAX5112_04410"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="317"/>
            <end position="384"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75923.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="384" mass="40162" checksum="2FE90B7B7CE1209D" modified="2015-12-09" version="1">MAHWKTHWKVLVNGQDMTISMRPFLIDITVTDKEGSASDTCALTLDDTGGQLALPSEGASLLVFLNGVLVFSGVVDTVRSSGSRGGGRLLRVSAKGFDSRGKIKQPMQIHQDDGTIGDFLKKLGNKVGLDVKVDPGFASIARTYLAADGESFLHVGQRLARELGATFKIRNTQAVFAKRGVDAGLPAVTGRAGAKQPGNVINWDIAPFAGRRSFTKAKVQYFDREAAEFKTEEVDIDLDRGLPEAVNFVRSKAADKSQAKDIAEARKREAEREGGEGSVLLDLTPEAQAEAMFALKGARPGVDGTYRIVTVTHKADRNGGSTTALELKQPGGGAGKDSRKSKNAPDTPIGAQGTSGAGGADGAAGGGSGLNLDNVGSGLGDGPE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQL2</accession>
    <name>A0A0M7AQL2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_04681</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000028">
        <property type="protein sequence ID" value="CTQ76706.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673862.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000028.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04681"/>
    <dbReference type="EnsemblBacteria" id="CTQ76706">
        <property type="protein sequence ID" value="CTQ76706"/>
        <property type="gene ID" value="LAX5112_04681"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.600">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1610">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010621">
        <property type="entry name" value="DUF1214"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037049">
        <property type="entry name" value="DUF1214_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010679">
        <property type="entry name" value="DUF1254"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037050">
        <property type="entry name" value="DUF1254_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06742">
        <property type="entry name" value="DUF1214"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06863">
        <property type="entry name" value="DUF1254"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809530" evidence="1">
        <location>
            <begin position="23"/>
            <end position="522"/>
        </location>
    </feature>
    <feature type="domain" description="DUF1254" evidence="3">
        <location>
            <begin position="107"/>
            <end position="219"/>
        </location>
    </feature>
    <feature type="domain" description="DUF1214" evidence="2">
        <location>
            <begin position="389"/>
            <end position="498"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF06742"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF06863"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ76706.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="522" mass="59020" checksum="DC58988F4CA30C97" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AR07</accession>
    <name>A0A0M7AR07_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Putative MscS family protein YfkC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">yfkC</name>
        <name evidence="11" type="ORF">LAX5112_04530</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the MscS (TC 1.A.23) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000025">
        <property type="protein sequence ID" value="CTQ76233.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673720.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000025.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04530"/>
    <dbReference type="EnsemblBacteria" id="CTQ76233">
        <property type="protein sequence ID" value="CTQ76233"/>
        <property type="gene ID" value="LAX5112_04530"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008381">
        <property type="term" value="F:mechanosensitive ion channel activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010920">
        <property type="entry name" value="LSM_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006685">
        <property type="entry name" value="MscS_channel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011066">
        <property type="entry name" value="MscS_channel_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011014">
        <property type="entry name" value="MscS_channel_TM-2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023408">
        <property type="entry name" value="MscS_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045276">
        <property type="entry name" value="YbiO_bact"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30460">
        <property type="entry name" value="PTHR30460"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00924">
        <property type="entry name" value="MS_channel"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50182">
        <property type="entry name" value="SSF50182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82689">
        <property type="entry name" value="SSF82689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82861">
        <property type="entry name" value="SSF82861"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10" id="KW-0732">Signal</keyword>
    <keyword evidence="6" id="KW-0346">Stress response</keyword>
    <keyword evidence="4 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 9" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="10">
        <location>
            <begin position="1"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809598" evidence="10">
        <location>
            <begin position="33"/>
            <end position="784"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="121"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="169"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="208"/>
            <end position="227"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="248"/>
            <end position="269"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="281"/>
            <end position="302"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="323"/>
            <end position="348"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="360"/>
            <end position="379"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="441"/>
            <end position="460"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="466"/>
            <end position="486"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="525"/>
            <end position="544"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="550"/>
            <end position="572"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="49"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="402"/>
            <end position="422"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008017"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ76233.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="784" mass="84351" checksum="D4ABDE812577412D" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AR38</accession>
    <name>A0A0M7AR38_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Ribosomal-protein-alanine acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04446</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ76044.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673652.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000024.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76044">
        <property type="protein sequence ID" value="CTQ76044"/>
        <property type="gene ID" value="LAX5112_04446"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="1"/>
            <end position="149"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76044.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="149" mass="16285" checksum="EE5430975FBA4479" modified="2015-12-09" version="1">MKIRPAVPDDVSAVRACAEEAYAPYIVTIGRKPAPMIADFETQIGAGQVHVAEDETGSLLGFIVFFPMADHMFLENVAVVLAAAGRGIGKALISHCEAKARSLGLSTICLYTNEKMTANLRIYPRLGYTESGRRTEDGFNRVYFKKTII</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ART4</accession>
    <name>A0A0M7ART4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transglutaminase-like superfamily protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04977</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000037">
        <property type="protein sequence ID" value="CTQ77609.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674112.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000037.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77609">
        <property type="protein sequence ID" value="CTQ77609"/>
        <property type="gene ID" value="LAX5112_04977"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002931">
        <property type="entry name" value="Transglutaminase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01841">
        <property type="entry name" value="Transglut_core"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="SSF54001"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TGc" evidence="1">
        <location>
            <begin position="104"/>
            <end position="195"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01841"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77609.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="282" mass="30315" checksum="FFD8AE4DBAB5915D" modified="2015-12-09" version="1">MSIFVNVTIQPDQELGRKLLVPAGIPTPHQTPVSFKVEGGTVELSGEVSTGQMAALISPDEGTPVTVSYAYTDSGSGYPEPMFQPRLNRFTRAANELVDDVRGLVDHSKDGHAAIEAIVNAVAEKFHYGHPEVRFNDGLDEVPYISCGLTEGSCVDINTYLIACLRAAGLEAGYVYGYFFPEEKNGTCVDGHCWVVTRHQGVVLEWDIAHHLKLGTREICCGLNPKPGHRVATAHSMGLSFPTLGIHETKLLGEPAWVASDGKLASADLDIRCSIADEAVAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARV7</accession>
    <name>A0A0M7ARV7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative inner membrane transporter yiJE</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yijE_2</name>
        <name evidence="3" type="ORF">LAX5112_04848</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000032">
        <property type="protein sequence ID" value="CTQ77241.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77241">
        <property type="protein sequence ID" value="CTQ77241"/>
        <property type="gene ID" value="LAX5112_04848"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000620">
        <property type="entry name" value="EamA_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00892">
        <property type="entry name" value="EamA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="36"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="67"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="93"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="124"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="148"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="180"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="212"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="246"/>
            <end position="262"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="268"/>
            <end position="287"/>
        </location>
    </feature>
    <feature type="domain" description="EamA" evidence="2">
        <location>
            <begin position="12"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="domain" description="EamA" evidence="2">
        <location>
            <begin position="154"/>
            <end position="285"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ77241.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="291" mass="31264" checksum="6339E6468F42E27B" modified="2015-12-09" version="1">MAYLAKIAPSLFVLLWSTGFIGSKLGAPYIEPMAFLTVRFAAVLPILFILGLFWVKSWPKDKKAIGHCIVTGMLVHGIYLGGVFWAIKQGMPAGASAIIVGLQPVLTAIFAVGMIGEVISRKHWISMAIGLSGLGLVLGPRFDLAGSGITLVTISVVFFSVIAISVGTVYQKRFVPNTDLLAATFWQYVGALLVTTPLSLFETWQITWSGELIVALAWLVLVLSIGAIMLLMLLIRQGAVSQVASLFYLVPVATAIESYFLFGETLSMIQIAGMALVVGAVLMIRTAPKRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ATB5</accession>
    <name>A0A0M7ATB5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04713</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000029">
        <property type="protein sequence ID" value="CTQ76814.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04713"/>
    <dbReference type="EnsemblBacteria" id="CTQ76814">
        <property type="protein sequence ID" value="CTQ76814"/>
        <property type="gene ID" value="LAX5112_04713"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016884">
        <property type="term" value="F:carbon-nitrogen ligase activity, with glutamine as amido-N-donor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.410">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1510.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003789">
        <property type="entry name" value="Asn/Gln_tRNA_amidoTrase-B-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023168">
        <property type="entry name" value="GatB_Yqey_C_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019004">
        <property type="entry name" value="YqeY/Aim41"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042184">
        <property type="entry name" value="YqeY/Aim41_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR28055">
        <property type="entry name" value="PTHR28055"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09424">
        <property type="entry name" value="YqeY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89095">
        <property type="entry name" value="SSF89095"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="152"/>
            <end position="174"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76814.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="174" mass="19557" checksum="2375CC6D029C0681" modified="2015-12-09" version="1">MRDVMRDRINAALRAAQDAGDKRRCATLRLVQTAVKDRESAARENGKDGINGDEVIDILQKMVRQRDESAADFENSGKLDLAEQERTEQAIIREFLPEQLNEDEVRSACEETVREIEAHGLRDIGRCMNELKSRYPGQMDFVQASCVMRDMLRNGNNDNAGSEPVSEVDGKSAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZP46</accession>
    <name>A0A0M6ZP46_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="12">Chemotaxis protein MotA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">motA</name>
        <name evidence="12" type="ORF">LAX5112_00188</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the MotA family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64127.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008197164.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00188"/>
    <dbReference type="EnsemblBacteria" id="CTQ64127">
        <property type="protein sequence ID" value="CTQ64127"/>
        <property type="gene ID" value="LAX5112_00188"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0097588">
        <property type="term" value="P:archaeal or bacterial-type flagellum-dependent cell motility"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006811">
        <property type="term" value="P:ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000540">
        <property type="entry name" value="Flag_MotA_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022522">
        <property type="entry name" value="Flagellar_motor_stator_MotA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002898">
        <property type="entry name" value="MotA_ExbB_proton_chnl"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30433:SF4">
        <property type="entry name" value="PTHR30433:SF4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01618">
        <property type="entry name" value="MotA_ExbB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03818">
        <property type="entry name" value="MotA1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01307">
        <property type="entry name" value="MOTA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6" id="KW-0283">Flagellar rotation</keyword>
    <keyword evidence="8" id="KW-0406">Ion transport</keyword>
    <keyword evidence="9 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 10" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="29"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="168"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="197"/>
            <end position="220"/>
        </location>
    </feature>
    <feature type="domain" description="MotA_ExbB" evidence="11">
        <location>
            <begin position="135"/>
            <end position="231"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008038"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022779"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF01618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ64127.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="297" mass="31835" checksum="378990FDE8B776FC" modified="2015-12-09" version="1">MTIIIGLIIGAASLIGGFAAMGGKVLVLWQPWELVIILGVAIGAFIVANPVKVILGTTVAVSDALRNAVPSKRDYLDVLALLYGLMRELRAKGRNAVEPHIEDPSTSPIFQKYPSVLRDANMTTFICDYFRLIIVGNARAHEIEALVDEEIQTIHRDQMKPYHAMSSVADALPAIGIIAAVLGVIKAMGAIDQSPQLLGSLIGAALVGTFIGILFSYSLFGPLAAKIKSVRETRLRNYIVVKQTLLAFMNGADPQIALEHGRKTISGYDRPTIDEVENETMRAGGAETSTADLQGAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPN3</accession>
    <name>A0A0M6ZPN3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Taurine transporter subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_00254</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64317.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00254"/>
    <dbReference type="EnsemblBacteria" id="CTQ64317">
        <property type="protein sequence ID" value="CTQ64317"/>
        <property type="gene ID" value="LAX5112_00254"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="23"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="103"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="152"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="239"/>
            <end position="260"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="272"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="103"/>
            <end position="296"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ64317.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="307" mass="32947" checksum="1A9B502DCBDDBCA4" modified="2015-12-09" version="1">MSDTALAAPRSTNPFAGLMSGTLGPVLVVVLAILAIWYIAAVSLNTPFQQDMYERANQTDVPMSQLVRDTLAQERPVLPAPHQVIVEIWNTTVEKKITSKRSLIYHSGITLSSTLLGFLIGTLLGILLAVGIVHSRVLDKSLMPWVISSQTIPILAIAPMIIVVLNAVGISGLLPKAMISTYLSFFPVTVGMVKGLRSPEVIHMDLMHTYSATRLQAFWKLRLPYAVPYLFTSMKIGMAASLVGAIVGELPTGAIAGLGARLLAGSYYGQTVQIWSALLMAAFLAGTLVALIGVFEKLTLKRMGMAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPQ7</accession>
    <name>A0A0M6ZPQ7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Spermidine/putrescine import ATP-binding protein PotA</fullName>
            <ecNumber evidence="9">7.6.2.11</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">potA_1</name>
        <name evidence="9" type="synonym">potA</name>
        <name evidence="11" type="ORF">LAX5112_00381</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.</text>
    </comment>
    <comment type="subunit">
        <text evidence="9">The complex is composed of two ATP-binding proteins (PotA), two transmembrane proteins (PotB and PotC) and a solute-binding protein (PotD).</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.</text>
    </comment>
    <dbReference type="EC" id="7.6.2.11" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64728.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670535.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ64728">
        <property type="protein sequence ID" value="CTQ64728"/>
        <property type="gene ID" value="LAX5112_00381"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015417">
        <property type="term" value="F:ABC-type polyamine transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008995">
        <property type="entry name" value="Mo/tungstate-bd_C_term_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005893">
        <property type="entry name" value="Sp_pt_ABC_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013611">
        <property type="entry name" value="Transp-assoc_OB_typ2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08402">
        <property type="entry name" value="TOBE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50331">
        <property type="entry name" value="SSF50331"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01187">
        <property type="entry name" value="potA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 8 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 9" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="11" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="4 8 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 9" id="KW-1278">Translocase</keyword>
    <keyword evidence="2 9" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ABC transporter" evidence="10">
        <location>
            <begin position="25"/>
            <end position="255"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="57"/>
            <end position="64"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU364083"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ64728.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="385" mass="43114" checksum="18C04B9BC3762873" modified="2015-12-09" version="1">MAKKTIGPVRREFVPWEDPEQKPFIEFRNVTKKFGDFVAVNNLSLKIYKREFFALLGGSGCGKTTLMRMLAGFETPTSGEIFLDGEDLSGIPPFRRPSNMMFQSYALFPHMSVEKNIAFGLEQDNLPKTEIDDRVAEMLRLTKLEQFAKRKPHQLSGGQRQRVALARSLAKRPKVLLLDEPLGALDRKLREETQFELMALQEDLKMTFLIVTHDQEEAMTVADRIAVMDRGELVQVATPSEIYEAPNSKFVADFIGDVNLIEAKVLEKGDNGTRMQAAVGDFAIDTEQTTSASVGDTVWYAIRPEKMRIAQGQPESSVTNQIGGIVWDIAYLGDVSIFHAKVGEGDHDILRATKANISRMVENPITWDENVILTFDRDAGVILTG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPT5</accession>
    <name>A0A0M6ZPT5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="18">Siroheme synthase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="18" type="primary">cysG_1</name>
        <name evidence="18" type="ORF">LAX5112_00394</name>
    </gene>
    <organism evidence="18 19">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="19" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="19">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>NAD(+) + precorrin-2 = 2 H(+) + NADH + sirohydrochlorin</text>
            <dbReference type="Rhea" id="RHEA:15613"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:58351"/>
            <dbReference type="ChEBI" id="CHEBI:58827"/>
            <dbReference type="EC" id="1.3.1.76"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="13">Porphyrin-containing compound metabolism; siroheme biosynthesis; precorrin-2 from uroporphyrinogen III: step 1/1.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2">Porphyrin-containing compound metabolism; siroheme biosynthesis; sirohydrochlorin from precorrin-2: step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 15">Belongs to the precorrin methyltransferase family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64765.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670370.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00394"/>
    <dbReference type="EnsemblBacteria" id="CTQ64765">
        <property type="protein sequence ID" value="CTQ64765"/>
        <property type="gene ID" value="LAX5112_00394"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00262">
        <property type="reaction ID" value="UER00211"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043115">
        <property type="term" value="F:precorrin-2 dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051266">
        <property type="term" value="F:sirohydrochlorin ferrochelatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004851">
        <property type="term" value="F:uroporphyrin-III C-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009236">
        <property type="term" value="P:cobalamin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019354">
        <property type="term" value="P:siroheme biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd11642">
        <property type="entry name" value="SUMT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.210">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.950.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1010.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000878">
        <property type="entry name" value="4pyrrol_Mease"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035996">
        <property type="entry name" value="4pyrrol_Methylase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014777">
        <property type="entry name" value="4pyrrole_Mease_sub1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014776">
        <property type="entry name" value="4pyrrole_Mease_sub2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006366">
        <property type="entry name" value="CobA/CysG_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037115">
        <property type="entry name" value="Sirohaem_synt_dimer_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012409">
        <property type="entry name" value="Sirohaem_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019478">
        <property type="entry name" value="Sirohaem_synthase_dimer_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006367">
        <property type="entry name" value="Sirohaem_synthase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003043">
        <property type="entry name" value="Uropor_MeTrfase_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10414">
        <property type="entry name" value="CysG_dimeriser"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00590">
        <property type="entry name" value="TP_methylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF036426">
        <property type="entry name" value="Sirohaem_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53790">
        <property type="entry name" value="SSF53790"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01469">
        <property type="entry name" value="cobA_cysG_Cterm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01470">
        <property type="entry name" value="cysG_Nterm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00839">
        <property type="entry name" value="SUMT_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00840">
        <property type="entry name" value="SUMT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0169">Cobalamin biosynthesis</keyword>
    <keyword evidence="10" id="KW-0456">Lyase</keyword>
    <keyword evidence="5 15" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="12" id="KW-0511">Multifunctional enzyme</keyword>
    <keyword evidence="9" id="KW-0520">NAD</keyword>
    <keyword evidence="8" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="11" id="KW-0627">Porphyrin biosynthesis</keyword>
    <keyword evidence="19" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="6 15" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="CysG_dimeriser" evidence="17">
        <location>
            <begin position="168"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="domain" description="TP_methylase" evidence="16">
        <location>
            <begin position="235"/>
            <end position="445"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="14">
        <location>
            <position position="265"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="14">
        <location>
            <position position="287"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001156"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005010"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005879"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022573"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023268"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00025705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="PIRSR" id="PIRSR036426-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="RuleBase" id="RU003960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="Pfam" id="PF00590"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="Pfam" id="PF10414"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="EMBL" id="CTQ64765.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="487" mass="51198" checksum="0FFBA25D7295C1DC" modified="2015-12-09" version="1">MASRRSQTEKARKKPEDRLDVFPAFMKVAGRRVVVVGHGGEAAAKVRLLGETNADIVVIGQGIDHELQSAVDQFSATHIAENFKPKHLTDAAMVFSAREDWDLDKAVIDAARIMGVPANAVDKPEICDFYTGALVNRAPIAVAITSTGVGPVLARHIRARIEGMLPRSTGALARLAESFRDAAAKVISDGNLRRNFWARFFSGSVATNVYAGKADVARAEAQRLLNSMAGEPGFVWLVGAGPGAEDLLTLRAQRLLQEADVIVHDDLVPADVVAMGRRDAERISVGKRKGAHSVPQSEICDLLVKLGSEGLKVVRLKAGDPMIFGRAAEEMEALRAGGIGFEIVPGVTAAFAAAASAQIPLTLRGVASNLVFATGHNAKSETLPDWAGLALKGATVAVYMGRTVAASVADRLIGAGMTPSTPVAVIENAAHPDERQFAGDLSELAVLSNRAEIDGPVLIVIGEAVGHAALEQAEPLAPQLVRAVAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQP4</accession>
    <name>A0A0M6ZQP4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">3-keto-5-aminohexanoate cleavage enzyme</fullName>
            <ecNumber evidence="1">2.-.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">kce_1</name>
        <name evidence="1" type="ORF">LAX5112_00495</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.-.-.-" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65058.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670446.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00495"/>
    <dbReference type="EnsemblBacteria" id="CTQ65058">
        <property type="protein sequence ID" value="CTQ65058"/>
        <property type="gene ID" value="LAX5112_00495"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019475">
        <property type="term" value="P:L-lysine catabolic process to acetate"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008567">
        <property type="entry name" value="KCE_family"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37418">
        <property type="entry name" value="PTHR37418"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05853">
        <property type="entry name" value="BKACE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ65058.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="309" mass="33737" checksum="85A5B58677185E47" modified="2015-12-09" version="1">MTDKILITCAITGSIHTPTMSPHLPVTADDIADQAIGAAHAGAAILHLHARDPETGRPSAKAEDFFAFLPKIRAGSGAVLNLTTGGSATMPLEERLDGPLRAEPEMCSLNMGTMNFALYPMAARHDHWKFDWEKPFLENTDDLVFKNTPRDIAHVLNELGEKRGARFEFECYDVSHLYMLRHFADRGLVKPPFFIQFVFGVLGGMGADPENLQHMKRMADKLFGTDYLFSVLAAGRQQIPFATMAASMGGHVRVGLEDNLFIAKGQLATSNAEQVVKIRGIVEALGRIVATPNDARAMLGLKGMAETAF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZR34</accession>
    <name>A0A0M6ZR34_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00367</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64691.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ64691">
        <property type="protein sequence ID" value="CTQ64691"/>
        <property type="gene ID" value="LAX5112_00367"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="41"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64691.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="171" mass="18139" checksum="7377EA9021AF6648" modified="2015-12-09" version="1">MAKERLGLWGRLIRLPGNLLLALINATAVLIIVACVLAIFVMNKVEETGTRVAGAVTGATLARLQVTPAEFKNNLESLDARLSEIAERLNDRGEVSDAALRRQLSELNANLVGLRQAADGIRSAGPDITAAAFDKAGDLLTDSLYTLRGCGVPTNVVIQEDADMSAPRSSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZS08</accession>
    <name>A0A0M6ZS08_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">D-hydantoinase</fullName>
            <ecNumber evidence="4">3.5.2.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">hyuA</name>
        <name evidence="4" type="ORF">LAX5112_00658</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="PTM">
        <text evidence="2">Carbamylation allows a single lysine to coordinate two divalent metal cations.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the metallo-dependent hydrolases superfamily. Hydantoinase/dihydropyrimidinase family.</text>
    </comment>
    <dbReference type="EC" id="3.5.2.-" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65508.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670608.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00658"/>
    <dbReference type="EnsemblBacteria" id="CTQ65508">
        <property type="protein sequence ID" value="CTQ65508"/>
        <property type="gene ID" value="LAX5112_00658"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016810">
        <property type="term" value="F:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006680">
        <property type="entry name" value="Amidohydro-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011778">
        <property type="entry name" value="Hydantoinase/dihydroPyrase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011059">
        <property type="entry name" value="Metal-dep_hydrolase_composite"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032466">
        <property type="entry name" value="Metal_Hydrolase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01979">
        <property type="entry name" value="Amidohydro_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51338">
        <property type="entry name" value="SSF51338"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51556">
        <property type="entry name" value="SSF51556"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02033">
        <property type="entry name" value="D-hydantoinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Amidohydro-rel" evidence="3">
        <location>
            <begin position="53"/>
            <end position="438"/>
        </location>
    </feature>
    <feature type="modified residue" description="N6-carboxylysine" evidence="2">
        <location>
            <position position="154"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR611778-50"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01979"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ65508.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="460" mass="49812" checksum="B62243CAB6BA5D48" modified="2015-12-09" version="1">MTAPVYDTVIRNGVLGDSHGHADGDIAIVNGRIAATGHELPKGNTEIDAQGRLVLPGGVDTHCHIEQLSGAGVMNADTFETATRSALHGGTTTTVSFAAQHPGMRIRDVLMDYSRLAAAGAMTDYAFHMIVADTASDNVDDLKTAIADGHRSIKIFTTYDKVRLQDNEILTTLRTARDAGALVCVHAENDAMIRDATATLLAEGKTAPRYHAQSHPRLAEIEAIERMCRFSEFTGARVMIFHISTKEGVEIVRNAKARGANIHAETCTHYLFQTEEILDRPDSAKFLCSPPQRLKEDQDALWAALGQELELVTSDHAPYRMDESGKFRHGSDAPFPKIANGQPGLELRLPLLFDAMVSSGRGGLAKFVELTSAAPARIFGLKTKGSLGIGKDADLVIWNPERTHKLPDALHDNVGYNPFAGAVLTGFPETVLRRGEIVVDNGELLTWPGTGRHLDMAAVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="39" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZS54</accession>
    <name>A0A0M6ZS54_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Lipoyl synthase</fullName>
            <ecNumber evidence="6">2.8.1.8</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Lip-syn</fullName>
            <shortName evidence="6">LS</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">Lipoate synthase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">Lipoic acid synthase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">Sulfur insertion protein LipA</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6 9" type="primary">lipA</name>
        <name evidence="9" type="ORF">LAX5112_00233</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 6">
            <text>[[Fe-S] cluster scaffold protein carrying a second [4Fe-4S](2+) cluster] + 4 H(+) + N(6)-octanoyl-L-lysyl-[protein] + 2 oxidized [2Fe-2S]-[ferredoxin] + 2 S-adenosyl-L-methionine = (R)-N(6)-dihydrolipoyl-L-lysyl-[protein] + 2 5'-deoxyadenosine + [[Fe-S] cluster scaffold protein] + 4 Fe(3+) + 2 hydrogen sulfide + 2 L-methionine + 2 reduced [2Fe-2S]-[ferredoxin]</text>
            <dbReference type="Rhea" id="RHEA:16585"/>
            <dbReference type="Rhea" id="RHEA-COMP:9928"/>
            <dbReference type="Rhea" id="RHEA-COMP:10000"/>
            <dbReference type="Rhea" id="RHEA-COMP:10001"/>
            <dbReference type="Rhea" id="RHEA-COMP:10475"/>
            <dbReference type="Rhea" id="RHEA-COMP:14568"/>
            <dbReference type="Rhea" id="RHEA-COMP:14569"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17319"/>
            <dbReference type="ChEBI" id="CHEBI:29034"/>
            <dbReference type="ChEBI" id="CHEBI:29919"/>
            <dbReference type="ChEBI" id="CHEBI:33722"/>
            <dbReference type="ChEBI" id="CHEBI:33737"/>
            <dbReference type="ChEBI" id="CHEBI:33738"/>
            <dbReference type="ChEBI" id="CHEBI:57844"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:78809"/>
            <dbReference type="ChEBI" id="CHEBI:83100"/>
            <dbReference type="EC" id="2.8.1.8"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
        <text evidence="6">Binds 2 [4Fe-4S] clusters per subunit. One cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.</text>
    </comment>
    <comment type="pathway">
        <text evidence="6">Protein modification; protein lipoylation via endogenous pathway; protein N(6)-(lipoyl)lysine from octanoyl-[acyl-carrier-protein]: step 2/2.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the radical SAM superfamily. Lipoyl synthase family.</text>
    </comment>
    <dbReference type="EC" id="2.8.1.8" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64253.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008195126.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00233"/>
    <dbReference type="EnsemblBacteria" id="CTQ64253">
        <property type="protein sequence ID" value="CTQ64253"/>
        <property type="gene ID" value="LAX5112_00233"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00538">
        <property type="reaction ID" value="UER00593"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016992">
        <property type="term" value="F:lipoate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102552">
        <property type="term" value="F:lipoyl synthase activity (acting on glycine-cleavage complex H protein"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102553">
        <property type="term" value="F:lipoyl synthase activity (acting on pyruvate dehydrogenase E2 protein)"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009249">
        <property type="term" value="P:protein lipoylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00206">
        <property type="entry name" value="Lipoyl_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006638">
        <property type="entry name" value="Elp3/MiaB/NifB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031691">
        <property type="entry name" value="LIAS_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003698">
        <property type="entry name" value="Lipoyl_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007197">
        <property type="entry name" value="rSAM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10949">
        <property type="entry name" value="PTHR10949"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16881">
        <property type="entry name" value="LIAS_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04055">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005963">
        <property type="entry name" value="Lipoyl_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDF00271">
        <property type="entry name" value="lipoyl_synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00029">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00729">
        <property type="entry name" value="Elp3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00510">
        <property type="entry name" value="lipA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51918">
        <property type="entry name" value="RADICAL_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 6" id="KW-0408">Iron</keyword>
    <keyword evidence="5 6" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="3 6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="6 9" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Radical SAM core" evidence="8">
        <location>
            <begin position="77"/>
            <end position="293"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="11"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="65"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="70"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="76"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="91"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>2</label>
            <note>4Fe-4S-S-AdoMet</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="95"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>2</label>
            <note>4Fe-4S-S-AdoMet</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="98"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>2</label>
            <note>4Fe-4S-S-AdoMet</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="304"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>1</label>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001264"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00206"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ64253.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="324" mass="36149" checksum="D689C0BD95478555" modified="2015-12-09" version="1">MVTIVDTLNRPKDPSEARPRHPEKAHRPDNPVQRKPKWIRVKAPTSPVYKETHNTVRQNNLVTVCEEAGCPNIGECWSKKHASFMILGDTCTRACAFCNVRTGMPGPIDPKEPQGVADAVATMGLEHVVVTSVDRDDLDDGGARHFADVIQAIRKTSPSTTVEVLTPDFLRKDGAIEIVVEARPDVFNHNLETVPSKYLKVRPGARYFHSIRLLQKVKELDPEMFTKSGIMVGLGEERNEVLQLMDDLRAADVDFLTIGQYLQPSKKHHPVMSFVTPEEFKGYERIAYAKGFLKVSASPLTRSSHHAGEDFADLRAARKAKLGH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSH8</accession>
    <name>A0A0M6ZSH8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Bifunctional tRNA (Mnm(5)s(2)U34)-methyltransferase/FAD-dependent cmnm(5)s(2)U34 oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00492</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65050.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670443.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00492"/>
    <dbReference type="EnsemblBacteria" id="CTQ65050">
        <property type="protein sequence ID" value="CTQ65050"/>
        <property type="gene ID" value="LAX5112_00492"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006076">
        <property type="entry name" value="FAD-dep_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01266">
        <property type="entry name" value="DAO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="DAO" evidence="1">
        <location>
            <begin position="6"/>
            <end position="344"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01266"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65050.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="366" mass="38747" checksum="4A61A70AABA36112" modified="2015-12-09" version="1">MTTRSDFLIIGGGIAGAGAAARLAPSASVTLLEMEDALGRHATGRSAAIFIRNYGNATLRALNAASEPVLETPEGLSDHSLLTPRGEMLIATEEELDDFRAYLAGAEGMEVLSPEEAVALFPLLRPQTIAAAAIERAAKDIDVDRLLQGFVRLARRNNARIVTNAPANRICKKGGLWQVETAAGTYAAPVLINAAGAWADVIADRAGVSKIGLQPMRRSAALIPPPDGLDITSWPLVASASESWYCKPDAGKFMVSPADEDPVEPHDAWADDMVLAEGLHRFEQAVTMEVTRVEHSWAGLRSFVKDRTPAAGFAPDADGFFWLAGQGGYGVQTAPALSQLTADLCLGNDPALSPDVVAALDPMRLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZST0</accession>
    <name>A0A0M6ZST0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">D-malate degradation protein R</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">dmlR_2</name>
        <name evidence="3" type="ORF">LAX5112_00763</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65805.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670686.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00763"/>
    <dbReference type="EnsemblBacteria" id="CTQ65805">
        <property type="protein sequence ID" value="CTQ65805"/>
        <property type="gene ID" value="LAX5112_00763"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ65805.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="305" mass="34008" checksum="0502E0D3F9E96B95" modified="2015-12-09" version="1">MAYLESLRVFTRVVELGSITAGGRDLRMTPAVASKRIKELEKHLGARLFNRTTRSLTPTEVGTVFYEHAVKALESINDAEAAVASFSDMPRGVLRVTAPLGAGRRIISPLVPKFVEQFPATEVHMRLSDRKVDIMSDGLDVAFFIGTPEDSNLKLRKIADCPRVLCAAPGYLEKHGTPQSPDDLLTGAHNCLLLRYPHSPEYFWVLETKEGPRKLQVSGKFDADHSDVLTDWALSGYGIVNKPRFDVAERLRKGDLIEILTDTPPPPIIFGCLYPHRRLQDPKIRHFVDFVIKHADLSDRATAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZT12</accession>
    <name>A0A0M6ZT12_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Gcv operon activator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">gcvA_3</name>
        <name evidence="4" type="ORF">LAX5112_00600</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65361.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670524.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00600"/>
    <dbReference type="EnsemblBacteria" id="CTQ65361">
        <property type="protein sequence ID" value="CTQ65361"/>
        <property type="gene ID" value="LAX5112_00600"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="3">
        <location>
            <begin position="7"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="292"/>
            <end position="311"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ65361.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="311" mass="33811" checksum="E136512473EF9F18" modified="2015-12-09" version="1">MKTLNQVHLSGLRAVEAVGRLGSVKAAADMLGVTVGAVSQQIQKTEAQLGVQLFERKNRLLVPTPHLQAMQPHLTSGISSFSTAVAITQRGREDALTISVAPVFAGKWLVWHLKHFNKLHPGIRVRVEATVDLADPNTSDVDLCIRVGHGPYPDVNAEKLLNQRVFPVCSPALAEQIKRPEDIGKLPIIRDPGQMFTWKTWLDLFDLDESILQDGPSFSDGSLCMDAAIAGQGVFLAWETLAVYAVNSGQVIAPFPERPATGLGYWLISGKNVPRTRAKDAFGSWLTSELQRSIGRPKGSDVAPAQRQGPD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZT41</accession>
    <name>A0A0M6ZT41_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">ABC-type uncharacterized transport system, permease component</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_00565</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65260.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008194548.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00565"/>
    <dbReference type="EnsemblBacteria" id="CTQ65260">
        <property type="protein sequence ID" value="CTQ65260"/>
        <property type="gene ID" value="LAX5112_00565"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001851">
        <property type="entry name" value="ABC_transp_permease"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02653">
        <property type="entry name" value="BPD_transp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="12"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="55"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="90"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="114"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="142"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="195"/>
            <end position="220"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="232"/>
            <end position="256"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="276"/>
            <end position="293"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="300"/>
            <end position="317"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="329"/>
            <end position="349"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ65260.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="368" mass="39496" checksum="1F70727B3651BDFC" modified="2015-12-09" version="1">MSGGQLPRWVDYGLIPFLNLAAAFLVSGLVVILIGENPIDAVKVLLWGSLGYTEGFGYTLFYATNFIFTGLAVAVAFHAGLFNIGGEGQAYLGGLGVAIACLALDHYVPWYVTLPFAIIGSALMGAAWAFIPAWLQATRGSHVVITTIMFNFIAASLMVYLLNGFLKKPGSMQNETRTFEDGGRLPFLNDIFPSFGFGFAPVNLALFVALAACVLVWLLIWRTKLGFEIRSFGANASAAVYAGISPVRITVVTMLISGGLAGMMAINEIMGSQHRLLIDFVTGYGFVGIAVALMGRAHPVGILLASILFGMLYQGGAELSFEMPNITRDMIIVIQGLVILFAGALEHMFRPAITRIFMPSRAQTAQEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZT72</accession>
    <name>A0A0M6ZT72_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">1,2-phenylacetyl-CoA monooxygenase, subunit B</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">paaB</name>
        <name evidence="1" type="ORF">LAX5112_00799</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65908.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040450973.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00799"/>
    <dbReference type="EnsemblBacteria" id="CTQ65908">
        <property type="protein sequence ID" value="CTQ65908"/>
        <property type="gene ID" value="LAX5112_00799"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004497">
        <property type="term" value="F:monooxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.520">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009359">
        <property type="entry name" value="PaaB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038693">
        <property type="entry name" value="PaaB_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06243">
        <property type="entry name" value="PaaB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF030200">
        <property type="entry name" value="PaaB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02157">
        <property type="entry name" value="PA_CoA_Oxy2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0503">Monooxygenase</keyword>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ65908.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="95" mass="10880" checksum="5C49A152B8EF58CC" modified="2015-12-09" version="1">MSKKEWPLWEVFIRGQHGLNHRHVGSLHAPDAEMAINHARDVYTRRKEGVSIWVVPSKEITASSPSEKGPLFDPAESKTYRHPTFFDIPEEVGKM</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZT90</accession>
    <name>A0A0M6ZT90_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00833</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65999.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00833"/>
    <dbReference type="EnsemblBacteria" id="CTQ65999">
        <property type="protein sequence ID" value="CTQ65999"/>
        <property type="gene ID" value="LAX5112_00833"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809262" evidence="1">
        <location>
            <begin position="29"/>
            <end position="129"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65999.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="129" mass="14418" checksum="5ECBB68EBD6853F7" modified="2015-12-09" version="1">MRRLNVAGALVGSALLAGLSALPTPGTAAELIMVEQPGCSWCMVWNEEIGVAYPKTDEGKRAPLRRVDITDGWPEDLDNIQRERLTPTFILLEDGEEIARLRGYPGEHFFWPLLSDMLEQLEEHRKSGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTC0</accession>
    <name>A0A0M6ZTC0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00593</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65340.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670520.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ65340">
        <property type="protein sequence ID" value="CTQ65340"/>
        <property type="gene ID" value="LAX5112_00593"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65340.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="196" mass="20124" checksum="941BF6D71486A6F0" modified="2015-12-09" version="1">MQISIETTTQSTSLLSASFQGSGNPSAKPETEDGKPGQPPKDTAVSLLEAASQKAEEDAVVIAALREAVEDGKEGDDDEKDGALATVEDYQKTAGQLKSALGEDGSVSSASVAYESATISTTTIEAEIDGETLSAQFVSFERVSFNSETGLSVRSANASTIEGEFDNGSFSYQSAAVSELYAGTGSQVSNLAGLTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTM8</accession>
    <name>A0A0M6ZTM8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">UPF0178 protein LAX5112_00401</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_00401</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the UPF0178 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64783.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670378.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00401"/>
    <dbReference type="EnsemblBacteria" id="CTQ64783">
        <property type="protein sequence ID" value="CTQ64783"/>
        <property type="gene ID" value="LAX5112_00401"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00489">
        <property type="entry name" value="UPF0178"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003791">
        <property type="entry name" value="UPF0178"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35146">
        <property type="entry name" value="PTHR35146"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02639">
        <property type="entry name" value="DUF188"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008522"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00489"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ64783.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="152" mass="16836" checksum="3A76885182601453" modified="2015-12-09" version="1">MTVLYVDADACPVKDETIRVGERHKVRVVFVSNSWMRLPEGDLIERVVVPEGPDEADNWIADHSGPGDVVITADVPLAARCVKTGAQVLSPNGKPFREDAIGMRLAMRDLNTHLREIGEIREGGPSFTKEDRSRFLNQLETVMRAAKRQTGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZU00</accession>
    <name>A0A0M6ZU00_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00722</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65691.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ65691">
        <property type="protein sequence ID" value="CTQ65691"/>
        <property type="gene ID" value="LAX5112_00722"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="47"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="78"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="110"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="137"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="163"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="261"/>
            <end position="289"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="296"/>
            <end position="313"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="319"/>
            <end position="340"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="352"/>
            <end position="370"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="390"/>
            <end position="417"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="424"/>
            <end position="449"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="455"/>
            <end position="475"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65691.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="481" mass="52720" checksum="0290791DC9EF1128" modified="2015-12-09" version="1">MGSVAGVVGGFLLIGLPVAGHILTPLIAIPMALVLSVLLANYAPRTALISVIIALLFQNFFVSMVSSNLSGPDEFKIIRGYNFVILVSIWSAFFASYWTRFRGQNRSIDLIMNLTFGAVGLVFFYFLIGIVQNPTPAVIYLRNILTPILIFQIALITFWRFDFGLTVPLFIVGSIFLLMGYIELIFREDWLYFTGGENYWELDMRSARLSLEWDEEARETGFVMLGFLDAFRVDLFNTPLLDGLDLRVTRLMGPNMHAISYSYAVAFLLVFALFRGSVIMALLLFPLLVFANAKGALILFILVLGAWFAFKLFGARMSLGVTGFVLALYAVAGIVVGLQIGDFHVLGFMGGLYNFLGFPFGHGIGVGGNLGTDFSQLDWPAYQAAGRTPVAIESAVGVLLYQMGPAAFFLLGVYIWLGWQTLRVASFTGASLHIAASFALLTVLVNGIFQEEALFSPLALGLLISLNGMVLGQAIRKGFVP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUC5</accession>
    <name>A0A0M6ZUC5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Acetylpolyamine aminohydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">aphA_1</name>
        <name evidence="3" type="ORF">LAX5112_00493</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the histone deacetylase family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65053.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670444.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00493"/>
    <dbReference type="EnsemblBacteria" id="CTQ65053">
        <property type="protein sequence ID" value="CTQ65053"/>
        <property type="gene ID" value="LAX5112_00493"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.800.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000286">
        <property type="entry name" value="His_deacetylse"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023801">
        <property type="entry name" value="His_deacetylse_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037138">
        <property type="entry name" value="His_deacetylse_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023696">
        <property type="entry name" value="Ureohydrolase_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00850">
        <property type="entry name" value="Hist_deacetyl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01270">
        <property type="entry name" value="HDASUPER"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52768">
        <property type="entry name" value="SSF52768"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Hist_deacetyl" evidence="2">
        <location>
            <begin position="27"/>
            <end position="335"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ65053.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="340" mass="36727" checksum="24A88A5A84065A82" modified="2015-12-09" version="1">MKAIFDDRQWIHDPKHFMANGTRLPNPEQPRRIEVLQAGAKAAGCGFQTPEDHGLGPIAALHSPEYLVFLQTIHDRWSRIENASDEVIPNVHPDRRTASYPRSAVGQAGYHQADTSCPIAAGTWKAAYWSAQSAISGADLMLAGDQSAYVLSRPPGHHAFGDLAGGFCFLNNSGIAAERLLKAGKRPAILDVDVHHGNGTQGIFYERGDVLTVSIHADPERFYPFFWGHAHERGEGLGRGANLNLPLERGTGDDEYLKTLDTALERIHAFGTDVLVVALGLDAYEKDPLKGLAITTPGFSRIGAAIAGLGLPTLFVQEGGYLADELGHNLTSFLTGFETA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVJ2</accession>
    <name>A0A0M6ZVJ2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">2-dehydro-3-deoxygluconokinase</fullName>
            <ecNumber evidence="2">2.7.1.45</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">kdgK_1</name>
        <name evidence="2" type="ORF">LAX5112_00647</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.7.1.45" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65483.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670599.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00647"/>
    <dbReference type="EnsemblBacteria" id="CTQ65483">
        <property type="protein sequence ID" value="CTQ65483"/>
        <property type="gene ID" value="LAX5112_00647"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008673">
        <property type="term" value="F:2-dehydro-3-deoxygluconokinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1190.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011611">
        <property type="entry name" value="PfkB_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029056">
        <property type="entry name" value="Ribokinase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00294">
        <property type="entry name" value="PfkB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53613">
        <property type="entry name" value="SSF53613"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PfkB" evidence="1">
        <location>
            <begin position="4"/>
            <end position="288"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65483.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="296" mass="31342" checksum="F210139BB01224DE" modified="2015-12-09" version="1">MVDILCIGEPLYELNEQPDGSFLPGCGGDVSNVCIAAARQQAYVGLIANIGADTFGEKLQETWRHEGVSTKYVTSKLGEDTGIYFVQHDATGHKFLYRRKDSAASRLTRDDIPQSAIAEASLVYASGISLAVSGDLRDATRHAIEVAVANGRTVVFDPNLRIALWSLDEARAVTHEVMKHCDIALPGLDDARALTGHTSPEEIVRFYHSLGARIVALTLGADGVAVSRGDGVKTIPGETVKTVDATGAGDCFNGVFMAAWLRSEDAVEAAAIANRAAAHSTTAYGAVTAPHMTLSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWC2</accession>
    <name>A0A0M6ZWC2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Heme A synthase</fullName>
            <shortName evidence="7">HAS</shortName>
            <ecNumber evidence="7">1.17.99.9</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Cytochrome aa3-controlling protein</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7 8" type="primary">ctaA</name>
        <name evidence="8" type="ORF">LAX5112_01006</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Catalyzes the conversion of heme O to heme A by two successive hydroxylations of the methyl group at C8. The first hydroxylation forms heme I, the second hydroxylation results in an unstable dihydroxymethyl group, which spontaneously dehydrates, resulting in the formyl group of heme A.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>2 A + Fe(II)-heme o + H2O = 2 AH2 + Fe(II)-heme a</text>
            <dbReference type="Rhea" id="RHEA:63388"/>
            <dbReference type="ChEBI" id="CHEBI:13193"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:17499"/>
            <dbReference type="ChEBI" id="CHEBI:60530"/>
            <dbReference type="ChEBI" id="CHEBI:61715"/>
            <dbReference type="EC" id="1.17.99.9"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="7">
            <name>heme b</name>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="7">Porphyrin-containing compound metabolism; heme A biosynthesis; heme A from heme O: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Interacts with CtaB.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cell membrane</location>
            <topology evidence="7">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the COX15/CtaA family. Type 2 subfamily.</text>
    </comment>
    <dbReference type="EC" id="1.17.99.9" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66541.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01006"/>
    <dbReference type="EnsemblBacteria" id="CTQ66541">
        <property type="protein sequence ID" value="CTQ66541"/>
        <property type="gene ID" value="LAX5112_01006"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00269">
        <property type="reaction ID" value="UER00713"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016653">
        <property type="term" value="F:oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006784">
        <property type="term" value="P:heme A biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01665">
        <property type="entry name" value="HemeA_synth_type2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003780">
        <property type="entry name" value="COX15/CtaA_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023754">
        <property type="entry name" value="HemeA_Synthase_type2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23289">
        <property type="entry name" value="PTHR23289"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02628">
        <property type="entry name" value="COX15-CtaA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 7" id="KW-0350">Heme biosynthesis</keyword>
    <keyword evidence="7" id="KW-0408">Iron</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4 7 8" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="30"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="113"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="143"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="174"/>
            <end position="193"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="214"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="279"/>
            <end position="297"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="309"/>
            <end position="329"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="341"/>
            <end position="363"/>
        </location>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="7">
        <location>
            <position position="277"/>
        </location>
        <ligand>
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="7">
        <location>
            <position position="347"/>
        </location>
        <ligand>
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023133"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01665"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ66541.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="373" mass="41987" checksum="EE52791C01BE3D51" modified="2015-12-09" version="1">MSADSLGTAGQAQDAKDREFIRSSRAMIRWWLYGVCFLILVMVVVGGATRLTESGLSITEWKPIHGVIPPLTEAEWQEELDKYRQIPEYQLINKGMSLDEFKFIFWWEWGHRLLGRVIGVAFFVPMVVFWASGRVEPWLKPRLVGGLVLGGLQGFVGWWMVASGLVERTDVSQYRLATHLTLAFIIFAYLFWIARRLAPHAAPPADTRSALLPVGWVFTSLLFLQLFFGGLVAGLNAGFTYNTWPLMDGQMIPSGLLMQSPVWLNFFENVLTVQFQHRMVAYLLGAAAIFLVWRTCVVTDAKRIRLPAFHLAAFVFLQMVFGIVTLLGFGNYTGELSMHQLGVALVHQGFAVFVIAATIDYMAALKGQYPIRN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWH0</accession>
    <name>A0A0M6ZWH0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01220</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67119.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67119">
        <property type="protein sequence ID" value="CTQ67119"/>
        <property type="gene ID" value="LAX5112_01220"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="45"/>
            <end position="61"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67119.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="62" mass="6679" checksum="67F6E7F2F11B7EF5" modified="2015-12-09" version="1">MILPTVLLILAALCAIGAIRALLNTVFKVNAFGGRSRARSLRDMVLYLALTTLMITAASMTR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWS5</accession>
    <name>A0A0M6ZWS5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">RecT family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01271</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67215.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671104.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67215">
        <property type="protein sequence ID" value="CTQ67215"/>
        <property type="gene ID" value="LAX5112_01271"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006259">
        <property type="term" value="P:DNA metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018330">
        <property type="entry name" value="RecT_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03837">
        <property type="entry name" value="RecT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="237"/>
            <end position="282"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67215.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="332" mass="35871" checksum="FD7DB424F54B4C1C" modified="2015-12-09" version="1">MNQIATQKQQAISTTHVGIGSEHGAKIAPQNLAEVVRFAEVMCKADIALPKHLRGNAGACMAVALQAMEWDMSPFAVASKSYAVNGQIAYEAQLIAAVVNSRSGIQGRLKYSYEGEGDNLVCTVTGKLDGEEYAYTSPPFGKITPKNSPLWKTDPEQQLGYYSSRAWARRYTPEVLLGVYDREEVQAYQGPDQAKDVTPKMPLAERLAAANAADSGEGFSQEHVEAETAEYTEIEGQPDQSFGTDAGQTSAPAEDAPGDDGLPSEDAPGAPDAEAQPVDDYIDQLRSMPTEKAVQELTNDFRADIEHMPAADQKRANQARAKRLMEIAEEAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZX40</accession>
    <name>A0A0M6ZX40_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">LAX5112_01327</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67319.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01327"/>
    <dbReference type="EnsemblBacteria" id="CTQ67319">
        <property type="protein sequence ID" value="CTQ67319"/>
        <property type="gene ID" value="LAX5112_01327"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007318">
        <property type="entry name" value="Phopholipid_MeTrfase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04191">
        <property type="entry name" value="PEMT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="9"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="37"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="89"/>
            <end position="118"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ67319.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="150" mass="16775" checksum="D4C9431BF5CE08E8" modified="2015-12-09" version="1">MELKVPPPIVFLVCLGLLYAGHIVLPFASVAPPFNTPIALIIILIGGLLGAQAVLAFIKAKTTVHPMHPEEASALVTSGFYRISRNPMYLGLLLFLLAAGIYWGTLTLIVVGPLFIWYMTEFQIKPEETRLADKFGEDYRDYLTKVRRWI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXA6</accession>
    <name>A0A0M6ZXA6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Type VI secretion protein IcmF</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">LAX5112_01135</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66901.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670990.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01135"/>
    <dbReference type="EnsemblBacteria" id="CTQ66901">
        <property type="protein sequence ID" value="CTQ66901"/>
        <property type="gene ID" value="LAX5112_01135"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009612">
        <property type="entry name" value="IcmF-related"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025743">
        <property type="entry name" value="IcmF-related_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010623">
        <property type="entry name" value="IcmF_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017731">
        <property type="entry name" value="TssM1-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06761">
        <property type="entry name" value="IcmF-related"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14331">
        <property type="entry name" value="IcmF-related_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06744">
        <property type="entry name" value="IcmF_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03348">
        <property type="entry name" value="VI_IcmF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="12"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="50"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="446"/>
            <end position="469"/>
        </location>
    </feature>
    <feature type="domain" description="IcmF-related_N" evidence="5">
        <location>
            <begin position="200"/>
            <end position="455"/>
        </location>
    </feature>
    <feature type="domain" description="IcmF-related" evidence="4">
        <location>
            <begin position="505"/>
            <end position="805"/>
        </location>
    </feature>
    <feature type="domain" description="IcmF_C" evidence="3">
        <location>
            <begin position="1064"/>
            <end position="1154"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="471"/>
            <end position="501"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF06744"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF06761"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF14331"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ66901.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="1204" mass="133564" checksum="161A66147E5C3577" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXV0</accession>
    <name>A0A0M6ZXV0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Non-haem bromoperoxidase BPO-A2</fullName>
            <ecNumber evidence="2">1.11.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">bpoA2</name>
        <name evidence="2" type="ORF">LAX5112_01462</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.11.1.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67638.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671282.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67638">
        <property type="protein sequence ID" value="CTQ67638"/>
        <property type="gene ID" value="LAX5112_01462"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004601">
        <property type="term" value="F:peroxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022742">
        <property type="entry name" value="Hydrolase_4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12146">
        <property type="entry name" value="Hydrolase_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-0575">Peroxidase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Hydrolase_4" evidence="1">
        <location>
            <begin position="28"/>
            <end position="272"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67638.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="294" mass="31888" checksum="767B77FBC464E0F3" modified="2015-12-09" version="1">MSAKRIEFKGAEENALIADQYGTGGQPVILLHGGGQTRHSWAAAAERIAALGHVVFSVDQRGHGESAWVPSGNYMFVHFAQDLVALCRQVIAKHGAKPVVVGASLGGFAGMLAEGAEAPGNQAALVLVDITPRVDMDGVYKILGFMGDRVEEGFGTVEEAADAIARYLPNRSRPKDLSGLSKNLRLHSDGRYRWHWDPAFLKVREHSDEEITKRVQAGMIEAAENLKVPVLLLRGRNSELVSMAHVEEFLDCVPHAKFTDIQDAGHMVAGDKNDVFAQAVEEFLTDLKAEALIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXW5</accession>
    <name>A0A0M6ZXW5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Methylmalonyl-CoA decarboxylase</fullName>
            <ecNumber evidence="3">4.1.1.41</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">scpB_2</name>
        <name evidence="3" type="ORF">LAX5112_01461</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the enoyl-CoA hydratase/isomerase family.</text>
    </comment>
    <dbReference type="EC" id="4.1.1.41" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67635.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671281.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01461"/>
    <dbReference type="EnsemblBacteria" id="CTQ67635">
        <property type="protein sequence ID" value="CTQ67635"/>
        <property type="gene ID" value="LAX5112_01461"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.12.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029045">
        <property type="entry name" value="ClpP/crotonase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018376">
        <property type="entry name" value="Enoyl-CoA_hyd/isom_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001753">
        <property type="entry name" value="Enoyl-CoA_hydra/iso"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014748">
        <property type="entry name" value="Enoyl-CoA_hydra_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00378">
        <property type="entry name" value="ECH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52096">
        <property type="entry name" value="SSF52096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00166">
        <property type="entry name" value="ENOYL_COA_HYDRATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0456">Lyase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005254"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU003707"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ67635.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="271" mass="28391" checksum="368F7B0D0D3ABB52" modified="2015-12-09" version="1">MTSDQSPSQSEDTNPFLCVSGQIVELILNAPDRKNALPLAGWARIPELLEPLRDNAGLRALIVRGAGGKAFCAGADIAEFEAVRSTADKAAHYDAVNVAAFRALKTLPVPVVAAIEGPCLGGGLGLALACDLRIASDTAFFSIPAARLGLAYPPDAVADLIEAVSPSNAKKLLFTAEHLSADNALQIGLIDEVHEAGALDDRISELCRHFEQNAPLSLKAAKTTINLLASASAAADLSAAQTMARTCVDSADYAEGCRAFLEKRKPVFKGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZY64</accession>
    <name>A0A0M6ZY64_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">Threonine--tRNA ligase</fullName>
            <ecNumber evidence="13">6.1.1.3</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="13">Threonyl-tRNA synthetase</fullName>
            <shortName evidence="13">ThrRS</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="13 16" type="primary">thrS</name>
        <name evidence="16" type="ORF">LAX5112_01443</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="17" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 13">
            <text>ATP + L-threonine + tRNA(Thr) = AMP + diphosphate + H(+) + L-threonyl-tRNA(Thr)</text>
            <dbReference type="Rhea" id="RHEA:24624"/>
            <dbReference type="Rhea" id="RHEA-COMP:9670"/>
            <dbReference type="Rhea" id="RHEA-COMP:9704"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57926"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78534"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.3"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="13">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="13">Binds 1 zinc ion per subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2 13">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="13">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="13">Belongs to the class-II aminoacyl-tRNA synthetase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.3" evidence="13"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67589.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671268.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01443"/>
    <dbReference type="EnsemblBacteria" id="CTQ67589">
        <property type="protein sequence ID" value="CTQ67589"/>
        <property type="gene ID" value="LAX5112_01443"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004829">
        <property type="term" value="F:threonine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006435">
        <property type="term" value="P:threonyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00771">
        <property type="entry name" value="ThrRS_core"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.930.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.800">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00184">
        <property type="entry name" value="Thr_tRNA_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002314">
        <property type="entry name" value="aa-tRNA-synt_IIb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006195">
        <property type="entry name" value="aa-tRNA-synth_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045864">
        <property type="entry name" value="aa-tRNA-synth_II/BPL/LPL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004154">
        <property type="entry name" value="Anticodon-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036621">
        <property type="entry name" value="Anticodon-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012675">
        <property type="entry name" value="Beta-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004095">
        <property type="entry name" value="TGS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012676">
        <property type="entry name" value="TGS-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002320">
        <property type="entry name" value="Thr-tRNA-ligase_IIa"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018163">
        <property type="entry name" value="Thr/Ala-tRNA-synth_IIc_edit"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033728">
        <property type="entry name" value="ThrRS_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012947">
        <property type="entry name" value="tRNA_SAD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11451">
        <property type="entry name" value="PTHR11451"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03129">
        <property type="entry name" value="HGTP_anticodon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02824">
        <property type="entry name" value="TGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00587">
        <property type="entry name" value="tRNA-synt_2b"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07973">
        <property type="entry name" value="tRNA_SAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01047">
        <property type="entry name" value="TRNASYNTHTHR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00863">
        <property type="entry name" value="tRNA_SAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55186">
        <property type="entry name" value="SSF55186"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55681">
        <property type="entry name" value="SSF55681"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81271">
        <property type="entry name" value="SSF81271"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00418">
        <property type="entry name" value="thrS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50862">
        <property type="entry name" value="AA_TRNA_LIGASE_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51880">
        <property type="entry name" value="TGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="12 13" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="9 13" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 13" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 13 16" id="KW-0436">Ligase</keyword>
    <keyword evidence="6 13" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7 13" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11 13" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10 13" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="4 13" id="KW-0820">tRNA-binding</keyword>
    <keyword evidence="8 13" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="TGS" evidence="15">
        <location>
            <begin position="1"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="domain" description="AA_TRNA_LIGASE_II" evidence="14">
        <location>
            <begin position="269"/>
            <end position="552"/>
        </location>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="346"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <note>catalytic</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="397"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <note>catalytic</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="529"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <note>catalytic</note>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000070"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00184"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS50862"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS51880"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="CTQ67589.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="656" mass="74993" checksum="6CBB67B54A461157" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZY90</accession>
    <name>A0A0M6ZY90_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Aminomethyltransferase</fullName>
            <ecNumber evidence="6">2.1.2.10</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">gcvT_6</name>
        <name evidence="6" type="ORF">LAX5112_00992</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the GcvT family.</text>
    </comment>
    <dbReference type="EC" id="2.1.2.10" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66504.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670899.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00992"/>
    <dbReference type="EnsemblBacteria" id="CTQ66504">
        <property type="protein sequence ID" value="CTQ66504"/>
        <property type="gene ID" value="LAX5112_00992"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004047">
        <property type="term" value="F:aminomethyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1360.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006076">
        <property type="entry name" value="FAD-dep_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032503">
        <property type="entry name" value="FAO_M"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013977">
        <property type="entry name" value="GCV_T_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006222">
        <property type="entry name" value="GCV_T_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029043">
        <property type="entry name" value="GcvT/YgfZ_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027266">
        <property type="entry name" value="TrmE/GcvT_dom1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01266">
        <property type="entry name" value="DAO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16350">
        <property type="entry name" value="FAO_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01571">
        <property type="entry name" value="GCV_T"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08669">
        <property type="entry name" value="GCV_T_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101790">
        <property type="entry name" value="SSF101790"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="DAO" evidence="2">
        <location>
            <begin position="6"/>
            <end position="364"/>
        </location>
    </feature>
    <feature type="domain" description="FAO_M" evidence="5">
        <location>
            <begin position="368"/>
            <end position="421"/>
        </location>
    </feature>
    <feature type="domain" description="GCV_T" evidence="3">
        <location>
            <begin position="431"/>
            <end position="699"/>
        </location>
    </feature>
    <feature type="domain" description="GCV_T_C" evidence="4">
        <location>
            <begin position="724"/>
            <end position="803"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008609"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01266"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01571"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF08669"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF16350"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ66504.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="811" mass="89106" checksum="D8F3D3D9085896F8" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYH9</accession>
    <name>A0A0M6ZYH9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01275</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67222.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671108.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01275"/>
    <dbReference type="EnsemblBacteria" id="CTQ67222">
        <property type="protein sequence ID" value="CTQ67222"/>
        <property type="gene ID" value="LAX5112_01275"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00085">
        <property type="entry name" value="HNHc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003615">
        <property type="entry name" value="HNH_nuc"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="85"/>
            <end position="125"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67222.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="125" mass="14383" checksum="6ED9870A252F7FBC" modified="2015-12-09" version="1">MPNIDNPLGGRSVEEWIGKTPDTPAPQRVKDRVFIRHKGRCHRTGRRIHVTDKWDTDHVKALGLGGENRESNLAPILRDEAHKEKTAEEVTMMRKADRMRRKHNGTWPKSKASIQSRGFPKTRDV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYR4</accession>
    <name>A0A0M6ZYR4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative enoyl-CoA hydratase echA8</fullName>
            <ecNumber evidence="3">4.2.1.17</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">echA8_3</name>
        <name evidence="3" type="ORF">LAX5112_01049</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="4.2.1.17" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66664.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670933.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01049"/>
    <dbReference type="EnsemblBacteria" id="CTQ66664">
        <property type="protein sequence ID" value="CTQ66664"/>
        <property type="gene ID" value="LAX5112_01049"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003860">
        <property type="term" value="F:3-hydroxyisobutyryl-CoA hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004300">
        <property type="term" value="F:enoyl-CoA hydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029045">
        <property type="entry name" value="ClpP/crotonase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045004">
        <property type="entry name" value="ECH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032259">
        <property type="entry name" value="HIBYL-CoA-H"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43176">
        <property type="entry name" value="PTHR43176"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16113">
        <property type="entry name" value="ECH_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52096">
        <property type="entry name" value="SSF52096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0456">Lyase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ECH_2" evidence="2">
        <location>
            <begin position="13"/>
            <end position="333"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF16113"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ66664.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="343" mass="36850" checksum="78882A93AA2C49E0" modified="2015-12-09" version="1">MSDILFEKRGKAGFVTLNRPKALNALTHPMCSALAAQLTEWAEDPDVAHVVITGAGEKAFCAGGDIRSIYDARMAGEMDGLAEFFKEEYLLNAQIKAYPKPYIALINGIVMGGGVGVSAHGSHRVGTEKTMFAMPETGIGFFPDVGGTYFLPRMPKKTGVYCALSAGRLKQGDALATGVLTHAIKETDLPAIEAELAENSDVDAVLSRYAVGVEPGPLMAAADTIERCFSESSVDAILAKLDGSGDEFALKAAQAIRQKSPTSVLIAFEQMQRGGELSFNECMKLEYRIVSEILKGSEFYEGVRAVLVDKDQDPKWSPPSLDQVDKEDLAAYFREPAGGDLPL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZF2</accession>
    <name>A0A0M6ZZF2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01387</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67430.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671190.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01387"/>
    <dbReference type="EnsemblBacteria" id="CTQ67430">
        <property type="protein sequence ID" value="CTQ67430"/>
        <property type="gene ID" value="LAX5112_01387"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021508">
        <property type="entry name" value="Gp17-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11367">
        <property type="entry name" value="DUF3168"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67430.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="138" mass="14727" checksum="D21E3C189B6DDB6C" modified="2015-12-09" version="1">MSLSGVQTALRAGLFSLLKADGVLSGLLGPDRIFETPPRADAFPYLVLESMETRPLLTEIGEGMVHTLALSVFSRKLSRDEAAQAAGRAAEVLMTGPVSLTGNRLVNLTLTSVLSRKLRDGRGYRASSSLRAVTEPLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A008</accession>
    <name>A0A0M7A008_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01231</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67143.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671069.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67143">
        <property type="protein sequence ID" value="CTQ67143"/>
        <property type="gene ID" value="LAX5112_01231"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67143.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="80" mass="9083" checksum="3703F4C15A5697EC" modified="2015-12-09" version="1">MSDDLEKRLKAMEMAIHSQTVAMRHMAQDVRELSEAIEAIALQLFKRDDVERIPDETEAERLLGDVLEQFSAGRGPDATR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0E5</accession>
    <name>A0A0M7A0E5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Proteasome endopeptidase complex, archaeal, beta subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01765</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68508.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671494.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01765"/>
    <dbReference type="EnsemblBacteria" id="CTQ68508">
        <property type="protein sequence ID" value="CTQ68508"/>
        <property type="gene ID" value="LAX5112_01765"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005839">
        <property type="term" value="C:proteasome core complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051603">
        <property type="term" value="P:proteolysis involved in protein catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029055">
        <property type="entry name" value="Ntn_hydrolases_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001353">
        <property type="entry name" value="Proteasome_sua/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016545">
        <property type="entry name" value="UCP009120_prtse"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00227">
        <property type="entry name" value="Proteasome"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF009120">
        <property type="entry name" value="UCP009120_prtse"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56235">
        <property type="entry name" value="SSF56235"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0647">Proteasome</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ68508.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="243" mass="27060" checksum="3D88EC97733A2D9B" modified="2015-12-09" version="1">MTYCVGIKLDRGLVLAADTRTNAGIDNIASFKKLHVWEKTGERVITLLSSGNLAVTQAVVSLLCEHADNSSDERTTVMTAKTMFQVARLVGSAIREVKAIDGEALAANADNFYVSFILGGQIKGEEPRLFQVYAAGNFIEVADDTPFLQIGEHKYGKPILDRVTRKNMRLGEAAKMILLSFDSTLRSNLSVGMPIDMLLYNTDSFNTDRQIRIQQDNPYFQKLSHGWSEKLREGFADLEEFDV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="35" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0I9</accession>
    <name>A0A0M7A0I9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Ketol-acid reductoisomerase (NADP(+))</fullName>
            <shortName evidence="9">KARI</shortName>
            <ecNumber evidence="9">1.1.1.86</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">Acetohydroxy-acid isomeroreductase</fullName>
            <shortName evidence="9">AHIR</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="9">Alpha-keto-beta-hydroxylacyl reductoisomerase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9 13" type="primary">ilvC</name>
        <name evidence="13" type="ORF">LAX5112_01599</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 9">Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>(2R)-2,3-dihydroxy-3-methylbutanoate + NADP(+) = (2S)-2-acetolactate + H(+) + NADPH</text>
            <dbReference type="Rhea" id="RHEA:22068"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:49072"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="ChEBI" id="CHEBI:58476"/>
            <dbReference type="EC" id="1.1.1.86"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>(2R,3R)-2,3-dihydroxy-3-methylpentanoate + NADP(+) = (S)-2-ethyl-2-hydroxy-3-oxobutanoate + H(+) + NADPH</text>
            <dbReference type="Rhea" id="RHEA:13493"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:49256"/>
            <dbReference type="ChEBI" id="CHEBI:49258"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="EC" id="1.1.1.86"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="9">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="9">Binds 2 magnesium ions per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="3 9">Amino-acid biosynthesis; L-isoleucine biosynthesis; L-isoleucine from 2-oxobutanoate: step 2/4.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2 9">Amino-acid biosynthesis; L-valine biosynthesis; L-valine from pyruvate: step 2/4.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4 9 10">Belongs to the ketol-acid reductoisomerase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.86" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67996.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008194118.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01599"/>
    <dbReference type="EnsemblBacteria" id="CTQ67996">
        <property type="protein sequence ID" value="CTQ67996"/>
        <property type="gene ID" value="LAX5112_01599"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00047">
        <property type="reaction ID" value="UER00056"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00049">
        <property type="reaction ID" value="UER00060"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004455">
        <property type="term" value="F:ketol-acid reductoisomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050661">
        <property type="term" value="F:NADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009097">
        <property type="term" value="P:isoleucine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009099">
        <property type="term" value="P:valine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00435">
        <property type="entry name" value="IlvC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008927">
        <property type="entry name" value="6-PGluconate_DH-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013023">
        <property type="entry name" value="KARI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000506">
        <property type="entry name" value="KARI_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013116">
        <property type="entry name" value="KARI_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014359">
        <property type="entry name" value="KARI_prok"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21371">
        <property type="entry name" value="PTHR21371"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01450">
        <property type="entry name" value="IlvC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07991">
        <property type="entry name" value="IlvN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000116">
        <property type="entry name" value="IlvC_gammaproteo"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48179">
        <property type="entry name" value="SSF48179"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00465">
        <property type="entry name" value="ilvC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51851">
        <property type="entry name" value="KARI_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51850">
        <property type="entry name" value="KARI_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 9 10" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="8 9 10" id="KW-0100">Branched-chain amino acid biosynthesis</keyword>
    <keyword evidence="13" id="KW-0413">Isomerase</keyword>
    <keyword evidence="7 9 10" id="KW-0460">Magnesium</keyword>
    <keyword evidence="6 9 10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-0521">NADP</keyword>
    <keyword evidence="9 10 13" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="KARI N-terminal Rossmann" evidence="11">
        <location>
            <begin position="1"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="domain" description="KARI C-terminal knotted" evidence="12">
        <location>
            <begin position="183"/>
            <end position="328"/>
        </location>
    </feature>
    <feature type="active site" evidence="9">
        <location>
            <position position="108"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="24"/>
            <end position="27"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="48"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="51"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="53"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="134"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9 10">
        <location>
            <position position="191"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9 10">
        <location>
            <position position="195"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9 10">
        <location>
            <position position="227"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9 10">
        <location>
            <position position="231"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9 10">
        <location>
            <position position="252"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004864"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00010318"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00435"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01198"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS51850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS51851"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="CTQ67996.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="339" mass="36866" checksum="AD94D4B85636D7C8" modified="2015-12-09" version="1">MRVYYDRDADLNLIKSKKVAVIGYGSQGRAHAMNLKDSGQKEIVVALRAGSTTALKAEADGFKVMTVAEAAAWADLMMMATPDELQADIYKDHIADNIRDGAAIAFAHGLNVHFGLIEPKSTVDVLMVAPKGPGHTVRGEYQKGGGVPCLIAVHQDASGNAHDLGLSYACGVGGGRSGIIETTFKEECETDLFGEQAVLCGGLVELIRAGFETLVEAGYAPEMAYFECLHEVKLIVDLIYEGGIANMNYSISNTAEWGEYVTGPRIVTPETKAEMKRVLEDIQNGKFTSDWMQEYRAGAAKFKATRRLNDAHQIEEVGEKLRGMMPWIKSNALVDKTKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A134</accession>
    <name>A0A0M7A134_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Dipeptide-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">dppA_1</name>
        <name evidence="5" type="ORF">LAX5112_01409</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the bacterial solute-binding protein 5 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67514.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671242.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01409"/>
    <dbReference type="EnsemblBacteria" id="CTQ67514">
        <property type="protein sequence ID" value="CTQ67514"/>
        <property type="gene ID" value="LAX5112_01409"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030288">
        <property type="term" value="C:outer membrane-bounded periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030678">
        <property type="entry name" value="Peptide/Ni-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039424">
        <property type="entry name" value="SBP_5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000914">
        <property type="entry name" value="SBP_5_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006311">
        <property type="entry name" value="TAT_signal"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30290">
        <property type="entry name" value="PTHR30290"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00496">
        <property type="entry name" value="SBP_bac_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002741">
        <property type="entry name" value="MppA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0574">Periplasm</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SBP_bac_5" evidence="4">
        <location>
            <begin position="102"/>
            <end position="446"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ67514.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="536" mass="58946" checksum="3CC10CB46B617253" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1B0</accession>
    <name>A0A0M7A1B0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">HTH-type transcriptional regulator LrpC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">lrpC</name>
        <name evidence="5" type="ORF">LAX5112_01445</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67594.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671270.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01445"/>
    <dbReference type="EnsemblBacteria" id="CTQ67594">
        <property type="protein sequence ID" value="CTQ67594"/>
        <property type="gene ID" value="LAX5112_01445"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000485">
        <property type="entry name" value="AsnC-type_HTH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019888">
        <property type="entry name" value="Tscrpt_reg_AsnC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019887">
        <property type="entry name" value="Tscrpt_reg_AsnC/Lrp_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019885">
        <property type="entry name" value="Tscrpt_reg_HTH_AsnC-type_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01037">
        <property type="entry name" value="AsnC_trans_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00033">
        <property type="entry name" value="HTHASNC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00344">
        <property type="entry name" value="HTH_ASNC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00519">
        <property type="entry name" value="HTH_ASNC_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50956">
        <property type="entry name" value="HTH_ASNC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH asnC-type" evidence="4">
        <location>
            <begin position="1"/>
            <end position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50956"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ67594.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="144" mass="16192" checksum="F78E5CBD70BDF9DB" modified="2015-12-09" version="1">MDAQDREILKILIEDGRCSIKDIAVKVGLSSPSVSDRLRRLQECGVIRSFTADVDPRALGYGLQAITRVRPLPGKLHIVRELLQEIPEVVECDKVTGDDCFVVRLVIREIEELDSILERITDKAETSTSIVKSQPVPRRVPLEF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1B8</accession>
    <name>A0A0M7A1B8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">GTP cyclohydrolase 1</fullName>
            <ecNumber evidence="8">3.5.4.16</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">GTP cyclohydrolase I</fullName>
            <shortName evidence="8">GTP-CH-I</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8 10" type="primary">folE</name>
        <name evidence="10" type="ORF">LAX5112_01449</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 8">
            <text>GTP + H2O = 7,8-dihydroneopterin 3'-triphosphate + formate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17473"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15740"/>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
            <dbReference type="ChEBI" id="CHEBI:58462"/>
            <dbReference type="EC" id="3.5.4.16"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 8">Cofactor biosynthesis; 7,8-dihydroneopterin triphosphate biosynthesis; 7,8-dihydroneopterin triphosphate from GTP: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="8">Homopolymer.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Toroid-shaped homodecamer, composed of two pentamers of five dimers.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 8">Belongs to the GTP cyclohydrolase I family.</text>
    </comment>
    <dbReference type="EC" id="3.5.4.16" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67604.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671275.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01449"/>
    <dbReference type="EnsemblBacteria" id="CTQ67604">
        <property type="protein sequence ID" value="CTQ67604"/>
        <property type="gene ID" value="LAX5112_01449"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00848">
        <property type="reaction ID" value="UER00151"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003934">
        <property type="term" value="F:GTP cyclohydrolase I activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035998">
        <property type="term" value="P:7,8-dihydroneopterin 3'-triphosphate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006730">
        <property type="term" value="P:one-carbon metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046654">
        <property type="term" value="P:tetrahydrofolate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.286.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1130.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00223">
        <property type="entry name" value="FolE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043133">
        <property type="entry name" value="GTP-CH-I_C/QueF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043134">
        <property type="entry name" value="GTP-CH-I_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001474">
        <property type="entry name" value="GTP_CycHdrlase_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018234">
        <property type="entry name" value="GTP_CycHdrlase_I_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020602">
        <property type="entry name" value="GTP_CycHdrlase_I_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11109">
        <property type="entry name" value="PTHR11109"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01227">
        <property type="entry name" value="GTP_cyclohydroI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00063">
        <property type="entry name" value="folE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00859">
        <property type="entry name" value="GTP_CYCLOHYDROL_1_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00860">
        <property type="entry name" value="GTP_CYCLOHYDROL_1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 8" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="6 8 10" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5 8" id="KW-0554">One-carbon metabolism</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="GTP_cyclohydroI" evidence="9">
        <location>
            <begin position="29"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="99"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="102"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="170"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005080"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022563"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00223"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF01227"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ67604.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="208" mass="23139" checksum="F0AA3D91AABC1E63" modified="2015-12-09" version="1">MDAVLKPVGKTFERKTPDQLQRPSREEAEAAVRTILAWTGDDPDREGLLDTPKRVVKAITQLYGGYFEDPAEHLERTFEDVGGYQDIVLVRGIPFHSHCEHHMLPFVGEAHIAYYPAEGVVGLSKLARVVDIFAKRLQTQENLTSQIASTIDDALAPRGLAVMMEAEHQCMTMRGVQKPGVSTITTQFTGIFEDDPAEQAKFMTLVRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1P5</accession>
    <name>A0A0M7A1P5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">UPF0173 metal-dependent hydrolase LAX5112_01872</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01872</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UPF0173 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68749.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01872"/>
    <dbReference type="EnsemblBacteria" id="CTQ68749">
        <property type="protein sequence ID" value="CTQ68749"/>
        <property type="gene ID" value="LAX5112_01872"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.15.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00457">
        <property type="entry name" value="UPF0173"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001279">
        <property type="entry name" value="Metallo-B-lactamas"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036866">
        <property type="entry name" value="RibonucZ/Hydroxyglut_hydro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022877">
        <property type="entry name" value="UPF0173"/>
    </dbReference>
    <dbReference type="SMART" id="SM00849">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56281">
        <property type="entry name" value="SSF56281"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lactamase_B" evidence="2">
        <location>
            <begin position="9"/>
            <end position="200"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00457"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ68749.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="236" mass="25587" checksum="770711D6659B325A" modified="2015-12-09" version="1">MGMKLTWYGHSAFKLETGAATILFDPFLTGNPMFPDATTPEEATQGATHIILTHGHDDHIGDSIDILKETGAQLTANFEICMWATRQGIENINPMNSGGMVDTGPFRVGMVRADHSSSKQSDGEAIYLGNPHGIIVEVPGQKVLYHMGDTDIFSDMALINEIYQPKIGLVPVGDRFTMGGKTAAMACQRFFKFDTIVPCHYGTFPILDQNTDAFLTAMGDHSGKVAAMAPGDFIEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A200</accession>
    <name>A0A0M7A200_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01693</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68320.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008190971.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ68320">
        <property type="protein sequence ID" value="CTQ68320"/>
        <property type="gene ID" value="LAX5112_01693"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ68320.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="67" mass="7430" checksum="0A291AB9DB14D72A" modified="2015-12-09" version="1">MKPLQKPTLTGICDQMASHDWTEAELDELVDPKLGIITGFQEVLEDLEVLRQVDLGATPPALSVQKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="33" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A285</accession>
    <name>A0A0M7A285_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Sulfate/thiosulfate import ATP-binding protein CysA</fullName>
            <ecNumber evidence="11">3.6.3.25</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">cysA_3</name>
        <name evidence="11" type="ORF">LAX5112_02019</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.25" evidence="11"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69198.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671713.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02019"/>
    <dbReference type="EnsemblBacteria" id="CTQ69198">
        <property type="protein sequence ID" value="CTQ69198"/>
        <property type="gene ID" value="LAX5112_02019"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015412">
        <property type="term" value="F:ABC-type molybdate transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008995">
        <property type="entry name" value="Mo/tungstate-bd_C_term_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011868">
        <property type="entry name" value="ModC_ABC_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004606">
        <property type="entry name" value="Mop_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005116">
        <property type="entry name" value="Transp-assoc_OB_typ1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03459">
        <property type="entry name" value="TOBE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50331">
        <property type="entry name" value="SSF50331"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02142">
        <property type="entry name" value="modC_ABC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51866">
        <property type="entry name" value="MOP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7 11" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="11" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4 8" id="KW-0500">Molybdenum</keyword>
    <keyword evidence="5 7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ABC transporter" evidence="9">
        <location>
            <begin position="1"/>
            <end position="231"/>
        </location>
    </feature>
    <feature type="domain" description="Mop" evidence="10">
        <location>
            <begin position="291"/>
            <end position="357"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="30"/>
            <end position="37"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022505"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01213"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51866"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ69198.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="363" mass="38912" checksum="5C0C87C01E44CD6B" modified="2015-12-09" version="1">MLDVDIKGQVGALPLTARFKSEGGVTSLFGQSGAGKTSLTNMIAGLIRPVSGRITVNGTPLFDADKNINLAVQDRRIGHVFQDARLFPHMSVRSNLSYARWAGRRKATRSMDEVVQLLGLQPLLSRKPATLSGGERQRVAIGRALLSDPRLLIMDEPLANLDQARRNDILPYLDRLCAEAGIPILYVSHSIEEVARLSQTLVILSDGQTPAYGPVAEMLARTDLGKATGRHEAGALLEGTVSHTDSAWGLTHINIGGATIQIPDLGAAPGEPIRLRIRARDVALATEVPKGLSIRNRLGGTIRSISEESGPYAEILCSVGEQMIRARITRASVADLGLQVGKTVTVLIKSVAIDKRQRAPVPG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2D0</accession>
    <name>A0A0M7A2D0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 11">Error-prone DNA polymerase</fullName>
            <ecNumber evidence="2 11">2.7.7.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11 13" type="primary">dnaE2</name>
        <name evidence="13" type="ORF">LAX5112_02043</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11">DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>a 2'-deoxyribonucleoside 5'-triphosphate + DNA(n) = diphosphate + DNA(n+1)</text>
            <dbReference type="Rhea" id="RHEA:22508"/>
            <dbReference type="Rhea" id="RHEA-COMP:17339"/>
            <dbReference type="Rhea" id="RHEA-COMP:17340"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:61560"/>
            <dbReference type="ChEBI" id="CHEBI:173112"/>
            <dbReference type="EC" id="2.7.7.7"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="11">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 11">Belongs to the DNA polymerase type-C family. DnaE2 subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.7" evidence="2 11"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69248.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671728.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02043"/>
    <dbReference type="EnsemblBacteria" id="CTQ69248">
        <property type="protein sequence ID" value="CTQ69248"/>
        <property type="gene ID" value="LAX5112_02043"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008408">
        <property type="term" value="F:3'-5' exonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003887">
        <property type="term" value="F:DNA-directed DNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01902">
        <property type="entry name" value="DNApol_error_prone"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011708">
        <property type="entry name" value="DNA_pol3_alpha_NTPase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040982">
        <property type="entry name" value="DNA_pol3_finger"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023073">
        <property type="entry name" value="DNA_pol_error_prone"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029460">
        <property type="entry name" value="DNAPol_HHH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004365">
        <property type="entry name" value="NA-bd_OB_tRNA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003141">
        <property type="entry name" value="Pol/His_phosphatase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016195">
        <property type="entry name" value="Pol/histidinol_Pase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004805">
        <property type="entry name" value="PolC_alpha"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32294">
        <property type="entry name" value="PTHR32294"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32294:SF4">
        <property type="entry name" value="PTHR32294:SF4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07733">
        <property type="entry name" value="DNA_pol3_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17657">
        <property type="entry name" value="DNA_pol3_finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14579">
        <property type="entry name" value="HHH_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01336">
        <property type="entry name" value="tRNA_anti-codon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00481">
        <property type="entry name" value="POLIIIAc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89550">
        <property type="entry name" value="SSF89550"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00594">
        <property type="entry name" value="polc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7 11" id="KW-0227">DNA damage</keyword>
    <keyword evidence="9 11" id="KW-0234">DNA repair</keyword>
    <keyword evidence="6 11" id="KW-0235">DNA replication</keyword>
    <keyword evidence="8 11" id="KW-0239">DNA-directed DNA polymerase</keyword>
    <keyword evidence="5 11 13" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 11 13" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="POLIIIAc" evidence="12">
        <location>
            <begin position="14"/>
            <end position="81"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007391"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00017273"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00024632"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01902"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="SMART" id="SM00481"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="CTQ69248.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="1130" mass="125980" checksum="B95D5A229CC6866D" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3V6</accession>
    <name>A0A0M7A3V6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">HTH-type transcriptional regulator GltC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">gltC_4</name>
        <name evidence="3" type="ORF">LAX5112_02161</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69559.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671813.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02161"/>
    <dbReference type="EnsemblBacteria" id="CTQ69559">
        <property type="protein sequence ID" value="CTQ69559"/>
        <property type="gene ID" value="LAX5112_02161"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00039">
        <property type="entry name" value="HTHLYSR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="60"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ69559.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="316" mass="34678" checksum="5251931F249A392F" modified="2015-12-09" version="1">MKLDERHLIQLAAVVQTGSVTGGADLLGMTQPAVSRTLSTLEKRLGEPLFFKGQRPLQPTPLARALADQGNAMLSASRKASETVQFFREGKAGSVRVGGTPFFMDALISSMTAEFQNSFPEIRVDQSYGYVRDLREAIHADRIDLAICPIDILGEGSGLVFEEILPGRNVVACSVLHPLLNKRKPTARELLEYPWVAPPEGSPLYADLHSILLSLGATEIKIRYSGGSLASVINYMTRTNALTVLPHSVVFAYRKDRTLTALPFKIPHPDRALGILRSADAPYLPAVDKYSKHIVTGFKDLRHLIKRHEDAVVWGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3W4</accession>
    <name>A0A0M7A3W4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 5">50S ribosomal protein L29</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 6" type="primary">rpmC</name>
        <name evidence="6" type="ORF">LAX5112_01734</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the universal ribosomal protein uL29 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68423.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008191932.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01734"/>
    <dbReference type="EnsemblBacteria" id="CTQ68423">
        <property type="protein sequence ID" value="CTQ68423"/>
        <property type="gene ID" value="LAX5112_01734"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.310">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00374">
        <property type="entry name" value="Ribosomal_L29"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001854">
        <property type="entry name" value="Ribosomal_L29/L35"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036049">
        <property type="entry name" value="Ribosomal_L29/L35_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018254">
        <property type="entry name" value="Ribosomal_L29_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00831">
        <property type="entry name" value="Ribosomal_L29"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46561">
        <property type="entry name" value="SSF46561"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00012">
        <property type="entry name" value="L29"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00579">
        <property type="entry name" value="RIBOSOMAL_L29"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3 5 6" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009254"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00021211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00374"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ68423.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="66" mass="7716" checksum="A4878CF877DB6EB5" modified="2015-12-09" version="1">MKATDVRAKTLDELRSELEGLKKEQFNLRFQKATGQLENTARVRQIRRDIARIQTIMREKRVSATA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A500</accession>
    <name>A0A0M7A500_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01889</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68793.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ68793">
        <property type="protein sequence ID" value="CTQ68793"/>
        <property type="gene ID" value="LAX5112_01889"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ68793.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="306" mass="32330" checksum="0C1B61EF86089887" modified="2015-12-09" version="1">MTVYKRTGAHLGLLLMLICGIGLAALERPLSKPAFAQATEAADMVLGIGICPPWRTQSVEVCRNSVQTVLEAFSERLSLSEARLHLMLNEGASADSLKKTVTALANTLGPEDRLIIYANIPSISNTAAEADLPSGQVLQLWADEKPESTELAIETGTWISAPAFAAMLHTVPAGQVILILDTSNSDTIDPDLLETHATNLDARPEALVTSAGAGQMANYSADRTIALFAKHLAASLSSTEGTFADVIKMAAAGTRQAAIPICVALREKQSDSQINEKDCTQVPEVHDPAGILSTIAVPPLPEQEAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A535</accession>
    <name>A0A0M7A535_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">AMP nucleosidase</fullName>
            <ecNumber evidence="1">3.2.2.4</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1 5" type="primary">amn</name>
        <name evidence="5" type="ORF">LAX5112_02400</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Catalyzes the hydrolysis of the N-glycosidic bond of AMP to form adenine and ribose 5-phosphate. Involved in regulation of AMP concentrations.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>AMP + H2O = adenine + D-ribose 5-phosphate</text>
            <dbReference type="Rhea" id="RHEA:20129"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16708"/>
            <dbReference type="ChEBI" id="CHEBI:78346"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="3.2.2.4"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the AMP nucleosidase family.</text>
    </comment>
    <dbReference type="EC" id="3.2.2.4" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70188.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672017.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02400"/>
    <dbReference type="EnsemblBacteria" id="CTQ70188">
        <property type="protein sequence ID" value="CTQ70188"/>
        <property type="gene ID" value="LAX5112_02400"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008714">
        <property type="term" value="F:AMP nucleosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044209">
        <property type="term" value="P:AMP salvage"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009116">
        <property type="term" value="P:nucleoside metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1730.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1580">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01932">
        <property type="entry name" value="AMP_nucleosidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037109">
        <property type="entry name" value="AMP_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011271">
        <property type="entry name" value="AMP_nucleosidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018953">
        <property type="entry name" value="AMP_nucleoside_Pase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000845">
        <property type="entry name" value="Nucleoside_phosphorylase_d"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035994">
        <property type="entry name" value="Nucleoside_phosphorylase_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43691:SF6">
        <property type="entry name" value="PTHR43691:SF6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10423">
        <property type="entry name" value="AMNp_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01048">
        <property type="entry name" value="PNP_UDP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53167">
        <property type="entry name" value="SSF53167"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01717">
        <property type="entry name" value="AMP-nucleosdse"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="1 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AMNp_N" evidence="4">
        <location>
            <begin position="32"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="domain" description="PNP_UDP_1" evidence="3">
        <location>
            <begin position="286"/>
            <end position="449"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01048"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF10423"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ70188.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="503" mass="56436" checksum="94CEB35F5492A79C" modified="2015-12-09" version="1">MTNSIHRAFQQPPRPTRLAPSHPLQVFSDPKEAVERLIEIFEANTAFLRKHFQALLDGDEPEHRVRAFYPQVQIVTDSHIRHDSRLSYGFVSGPGRHVATITRPDLFRHYLETQLSLLMKNHEVPVLVGDSDTPIPLHFAFYDGTHVEGGAAAASLDRPLADVFDLPDLTVMDDSIANGTYEPVDGEMPLASFTAPRVDYSLHRLQHYTATAVEHFQNYVLFTNYQFYIDEFCRMSQDYLADSDSGYEAFVGPGNLLTKAGETTPCSGTEPAKLPQMPAYHLKRADGSGITMVNIGVGPSNAKTITDHVAVLRPHVWLMLGHCAGLRNSQTLGDYVLAHGYVRDDNVLNQDLPIWVPIPPLAEVQVALEDAVAEITGYDGYDLKRVMRTGTVVSLDNRNWELWDQPELVKRFSQSRAIALDMESATIAANGFRFRVPYGTLLCISDKPLHGELKLPGMATDFYKRQVAQHLEIGIRSLEKMRQMPADRLHSRKLRSFAETAFQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5A7</accession>
    <name>A0A0M7A5A7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02440</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70268.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672042.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02440"/>
    <dbReference type="EnsemblBacteria" id="CTQ70268">
        <property type="protein sequence ID" value="CTQ70268"/>
        <property type="gene ID" value="LAX5112_02440"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="21"/>
            <end position="40"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70268.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="204" mass="21889" checksum="E81AB5157ADEDCE0" modified="2015-12-09" version="1">MYNAPQPKLEDLPSNRQLGRMSVVAAIGAVAIGVMVYLPAEYGIDPTGVGSVLGLTEMGEIKQQLAKEAAEDEKLHGSQDSSSLIDGVLGLFVSSAHAQDAWKDVVTFTLEPGAYTEIKATMEKGTTLTYAWMADGGRINFDLHAHAGGENVTYEKGRGETSGAGSFETPFAGDHGWFWRNRDKSAVTVTLQMRGDYSGIVRSD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5F7</accession>
    <name>A0A0M7A5F7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Demethylmenaquinone methyltransferase</fullName>
            <ecNumber evidence="2">2.1.1.163</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ubiE_4</name>
        <name evidence="2" type="ORF">LAX5112_02465</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.1.1.163" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70318.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672059.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02465"/>
    <dbReference type="EnsemblBacteria" id="CTQ70318">
        <property type="protein sequence ID" value="CTQ70318"/>
        <property type="gene ID" value="LAX5112_02465"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043770">
        <property type="term" value="F:demethylmenaquinone methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102094">
        <property type="term" value="F:S-adenosylmethionine:2-demethylmenaquinol methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102955">
        <property type="term" value="F:S-adenosylmethionine:2-demethylmenaquinol-7 methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102027">
        <property type="term" value="F:S-adenosylmethionine:2-demethylquinol-8 methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041698">
        <property type="entry name" value="Methyltransf_25"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13649">
        <property type="entry name" value="Methyltransf_25"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Methyltransf_25" evidence="1">
        <location>
            <begin position="48"/>
            <end position="148"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13649"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70318.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="217" mass="24194" checksum="21321EDB3E960094" modified="2015-12-09" version="1">MSHTADTASLMDAVYRNQRHIYDLTRKYYLLGRDQLIRDLAPPVGSAVLELGCGTGRNLIAAAKRYPKARFYGLDISEQMLETARANIEKAGLTDRIILVCGDASDPAAAKPLGITQFERVFFSYTLSMMPIWREALAAGLAHLAPQGRIHIVDFGQQEGLPVWFKALLMKWLASFHVTPRADLQEKLQKLAHGNGATCSYKPIYRGYAVMAELRKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5R3</accession>
    <name>A0A0M7A5R3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">cAMP regulatory protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">crp</name>
        <name evidence="4" type="ORF">LAX5112_02292</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ69941.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008195708.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02292"/>
    <dbReference type="EnsemblBacteria" id="CTQ69941">
        <property type="protein sequence ID" value="CTQ69941"/>
        <property type="gene ID" value="LAX5112_02292"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00038">
        <property type="entry name" value="CAP_ED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018490">
        <property type="entry name" value="cNMP-bd-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018488">
        <property type="entry name" value="cNMP-bd_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000595">
        <property type="entry name" value="cNMP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012318">
        <property type="entry name" value="HTH_CRP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00027">
        <property type="entry name" value="cNMP_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13545">
        <property type="entry name" value="HTH_Crp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00100">
        <property type="entry name" value="cNMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00419">
        <property type="entry name" value="HTH_CRP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51206">
        <property type="entry name" value="SSF51206"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00889">
        <property type="entry name" value="CNMP_BINDING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50042">
        <property type="entry name" value="CNMP_BINDING_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51063">
        <property type="entry name" value="HTH_CRP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cyclic nucleotide-binding" evidence="2">
        <location>
            <begin position="13"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="domain" description="HTH crp-type" evidence="3">
        <location>
            <begin position="147"/>
            <end position="221"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51063"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ69941.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="229" mass="24832" checksum="337B70F0494B3D79" modified="2015-12-09" version="1">MAKIDDFLKNSFSLQGLDSELALGLSKLARPIKMAANATLFENGDPGNGCYAVLEGSLKVSILSVDGDEQLLAVLGPGDLVGELALLDGRPRSATVSVLKEAQLAFIEKSAFERFADENPAVYRHMLSIVGKRLRHANDVLAARSFLPLPGRVAQTLLQLAETFGKPLDDGRVLIHYKLSQADIANMAGAARENVSRVLNDWKRSGTISRISGYYCLEQVDFLEQASTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5X7</accession>
    <name>A0A0M7A5X7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">(R)-specific enoyl-CoA hydratase</fullName>
            <ecNumber evidence="2">4.2.1.119</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">phaJ_3</name>
        <name evidence="2" type="ORF">LAX5112_02322</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="4.2.1.119" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70017.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02322"/>
    <dbReference type="EnsemblBacteria" id="CTQ70017">
        <property type="protein sequence ID" value="CTQ70017"/>
        <property type="gene ID" value="LAX5112_02322"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005835">
        <property type="term" value="C:fatty acid synthase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004312">
        <property type="term" value="F:fatty acid synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006633">
        <property type="term" value="P:fatty acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003965">
        <property type="entry name" value="Fatty_acid_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029069">
        <property type="entry name" value="HotDog_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002539">
        <property type="entry name" value="MaoC-like_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01575">
        <property type="entry name" value="MaoC_dehydratas"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01483">
        <property type="entry name" value="FASYNTHASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54637">
        <property type="entry name" value="SSF54637"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MaoC-like" evidence="1">
        <location>
            <begin position="22"/>
            <end position="114"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01575"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70017.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="148" mass="16169" checksum="D95E7483A0D38E7F" modified="2015-12-09" version="1">MLELQKLCFEDLTVGMTEELVKHVSSSDVVGFAEVSGDRNPIHLSEHFAARTPFKTRIAHGLYTASLISAVLGTRLPGPGAIYLSQTLNFKAPVKIGDDVTVTVRVEELMERGNRARLSCICSVDDTVVLEGEALVKVPSKTEDRSRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A756</accession>
    <name>A0A0M7A756_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02434</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70256.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008193716.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70256">
        <property type="protein sequence ID" value="CTQ70256"/>
        <property type="gene ID" value="LAX5112_02434"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ70256.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="61" mass="6482" checksum="BB05A6C1A23B8092" modified="2015-12-09" version="1">MTELIGAAALAVGGYWIVQRIKRKMANVEAQISKAAAKADPAGRGEKLVLDPVSGKYRPQS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A762</accession>
    <name>A0A0M7A762_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02680</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70995.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008190802.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70995">
        <property type="protein sequence ID" value="CTQ70995"/>
        <property type="gene ID" value="LAX5112_02680"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809310" evidence="1">
        <location>
            <begin position="22"/>
            <end position="89"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70995.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="89" mass="8194" checksum="D6B686063268AB10" modified="2015-12-09" version="1">MKKLFLVAATAALLVGCQSSSQTDRALVGGGLGAATGAVIGAATGGGAGAALAGAAIGGAGGAVVGAATAPKNCVAYDQYGNPYRVVCP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7P8</accession>
    <name>A0A0M7A7P8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02436</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70260.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70260">
        <property type="protein sequence ID" value="CTQ70260"/>
        <property type="gene ID" value="LAX5112_02436"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ70260.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="196" mass="22236" checksum="A51B206E9CAD9CCF" modified="2015-12-09" version="1">MDASSAGTETRTSKTFGAGRDLGVYMTLVDDRLNILSVFDDLRYDRSDADIMSPGMRTHAVQQLKPHGFKQTSGSALHNKADDVFCYIPKPQVLGASPFDVLRYTPKRERDYYILTPTQTACQIIDTYSFDEALEKVSALIQKQPINLYRLMDYLERKPVHETIREALGHFKFIQRKAVQSEPLKRRKALGSGLFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A858</accession>
    <name>A0A0M7A858_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 5">Ferric uptake regulation protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">fur_1</name>
        <name evidence="5" type="synonym">fur</name>
        <name evidence="6" type="ORF">LAX5112_02789</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Acts as a global negative controlling element, employing Fe(2+) as a cofactor to bind the operator of the repressed genes.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the Fur family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71345.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008197213.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02789"/>
    <dbReference type="EnsemblBacteria" id="CTQ71345">
        <property type="protein sequence ID" value="CTQ71345"/>
        <property type="gene ID" value="LAX5112_02789"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd07153">
        <property type="entry name" value="Fur_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1490.190">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002481">
        <property type="entry name" value="FUR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043135">
        <property type="entry name" value="Fur_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33202">
        <property type="entry name" value="PTHR33202"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01475">
        <property type="entry name" value="FUR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0408">Iron</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0678">Repressor</keyword>
    <keyword evidence="5" id="KW-0804">Transcription</keyword>
    <keyword evidence="5" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="4 5" id="KW-0862">Zinc</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002997"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007957"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00020910"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU364037"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ71345.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="149" mass="17268" checksum="D0648DBE1E036BFF" modified="2015-12-09" version="1">MTDERTLSLVELCVQKGMRMTEQRRVIASVIEQASEEHPDVEELYRRSVAIDPKISISTVYRTVKLFEDAGMVERHDFRDGRSRYETVPDEHHDHLIDLRSGQVIEFRNEEIEALQEFIAKKLGYKLVDHRLELYGVPIDPKKGGDTDG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A916</accession>
    <name>A0A0M7A916_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02719</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71107.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02719"/>
    <dbReference type="EnsemblBacteria" id="CTQ71107">
        <property type="protein sequence ID" value="CTQ71107"/>
        <property type="gene ID" value="LAX5112_02719"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035402">
        <property type="entry name" value="DUF1611-N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035086">
        <property type="entry name" value="DUF1611_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011669">
        <property type="entry name" value="UCP026760"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR40690">
        <property type="entry name" value="PTHR40690"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07755">
        <property type="entry name" value="DUF1611"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17396">
        <property type="entry name" value="DUF1611_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF026760">
        <property type="entry name" value="UCP026760"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF1611_N" evidence="2">
        <location>
            <begin position="46"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="domain" description="DUF1611" evidence="1">
        <location>
            <begin position="136"/>
            <end position="332"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF17396"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ71107.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="342" mass="36031" checksum="A28B4BB21B2AFC1A" modified="2015-12-09" version="1">MKALPMEIARPYLLFLGDVPDALAAKTATGIVDWRKDWCVGQVRLDGCAADTGLKDMSISEGSAAGAKTMVIGAVNAGGRLPDHWVDSVVEALNAGLDVASGLHVKLGDVPVIQEAAAKNGRQLHDVRHNSMTFATGKGIKRPGKRILTVGTDCSVGKKYTALAMDKAMNERGYTSSFCATGQTGVFISGRGLSLDAVVADFIAGAAEWLSPATEEDHWQVVEGQGSLFHPSFAGVTLGLLHGSQPDGFIVCHEPTRSKMRGVETPLPTVDQVIDMTIQCGKLTNPGIRCVGIAVNTQALDDDEALALLAKLGERHGLPATDPIRYGMEAVVDKVSAEFGTP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A953</accession>
    <name>A0A0M7A953_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02675</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70982.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70982">
        <property type="protein sequence ID" value="CTQ70982"/>
        <property type="gene ID" value="LAX5112_02675"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809335" evidence="1">
        <location>
            <begin position="25"/>
            <end position="111"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70982.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="111" mass="12607" checksum="0208EA0BD96249AD" modified="2015-12-09" version="1">MRYPNSVKVMVLAAAVLGAGPAFGSSMTKACYEKVHQPAVYKNIKRTIMTHRAHTRWEYQTINGRQVLCKVHRPAVYQTVVQNTLIQPARTVLKRVSARDCTQNARIYSNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9H6</accession>
    <name>A0A0M7A9H6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Putative ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">LAX5112_02721</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71112.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040450825.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02721"/>
    <dbReference type="EnsemblBacteria" id="CTQ71112">
        <property type="protein sequence ID" value="CTQ71112"/>
        <property type="gene ID" value="LAX5112_02721"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="24"/>
            <end position="261"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="56"/>
            <end position="63"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ71112.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="269" mass="29529" checksum="24745CB8522FE16E" modified="2015-12-09" version="1">MAVSDIDQPERKLTPVTEHSENILSVRDITVGFGSKIILQDLDLDVHRGEVLGFVGGSGTGKSVLMRTILGLTPRRAGRISVFGHDLSSASDKTRRMIERRWGVLFQQGALFSSLTVKQNIQVPMREHLKLSQRLMDELATLKLELVGLPQDAADKLPSELSGGMVKRASLARALALDPDLVFLDEPTSGLDPIGAAAFDSLIGNLSSTLDLTVYMVTHDLDSLHSICDRIAVLGQKRVLAIGPMEDMMKNDDPWIKSYFRGARALRRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9I1</accession>
    <name>A0A0M7A9I1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">23S rRNA (Uracil(1939)-C(5))-methyltransferase RlmD</fullName>
            <ecNumber evidence="6">2.1.1.190</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">rlmD</name>
        <name evidence="6" type="ORF">LAX5112_02492</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="4">Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.190" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70393.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672076.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02492"/>
    <dbReference type="EnsemblBacteria" id="CTQ70393">
        <property type="protein sequence ID" value="CTQ70393"/>
        <property type="gene ID" value="LAX5112_02492"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008173">
        <property type="term" value="F:RNA methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006396">
        <property type="term" value="P:RNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030390">
        <property type="entry name" value="MeTrfase_TrmA_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010280">
        <property type="entry name" value="U5_MeTrfase_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11061">
        <property type="entry name" value="PTHR11061"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05958">
        <property type="entry name" value="tRNA_U5-meth_tr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51687">
        <property type="entry name" value="SAM_MT_RNA_M5U"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01230">
        <property type="entry name" value="TRMA_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 4 6" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="2 4 6" id="KW-0808">Transferase</keyword>
    <feature type="active site" evidence="5">
        <location>
            <position position="367"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="4">
        <location>
            <position position="367"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="246"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="273"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="293"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="341"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01024"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ70393.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="410" mass="43682" checksum="8EE957D703BB76DA" modified="2015-12-09" version="1">MTETRLEITELGHRGDGIAFTGTGPVYVAGGLPGETVEAEIQNGRAQNPDYLSQSPDRIEPVCRHYAACGGCSVQHLAEAPYLSWKRNLVEKALKTQGIDAEVAQTIAATEGGRRRAAFTATRAGRAVLLGYHEKASHKLVDISECPVLDPSITNALKGLKSLAADLVPKKGELRITVLSTTSGLDVAFDKADKAYDRKIPALSQKTVELDLARLSVNGEVLLEVRPPLLDMGGTGLVPPPGGFTQATLAAEQALSELVVAGVAKAKTVADLFSGVGTFALRLARTANVHAVEGDSAAIAALDRSLRKPQGLKKVTFEKRDLFRRPLVPEELEPFAAVVFDPPRAGAQAQAEMLAKSKVKTIVAVSCNPATLARDLRILIDGGYALHTVTPVDQFHFSPHIEAVAVLKRE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9T3</accession>
    <name>A0A0M7A9T3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 9 10">Translation initiation factor IF-2</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9 13" type="primary">infB</name>
        <name evidence="13" type="ORF">LAX5112_02802</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9 10">One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 9 10">Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71381.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672344.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02802"/>
    <dbReference type="EnsemblBacteria" id="CTQ71381">
        <property type="protein sequence ID" value="CTQ71381"/>
        <property type="gene ID" value="LAX5112_02802"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003743">
        <property type="term" value="F:translation initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd03702">
        <property type="entry name" value="IF2_mtIF2_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10050">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00100_B">
        <property type="entry name" value="IF_2_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013575">
        <property type="entry name" value="IF2_assoc_dom_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044145">
        <property type="entry name" value="IF2_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006847">
        <property type="entry name" value="IF2_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005225">
        <property type="entry name" value="Small_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000795">
        <property type="entry name" value="T_Tr_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000178">
        <property type="entry name" value="TF_IF2_bacterial-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015760">
        <property type="entry name" value="TIF_IF2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023115">
        <property type="entry name" value="TIF_IF2_dom3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036925">
        <property type="entry name" value="TIF_IF2_dom3_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009000">
        <property type="entry name" value="Transl_B-barrel_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43381">
        <property type="entry name" value="PTHR43381"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00009">
        <property type="entry name" value="GTP_EFTU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11987">
        <property type="entry name" value="IF-2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08364">
        <property type="entry name" value="IF2_assoc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04760">
        <property type="entry name" value="IF2_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50447">
        <property type="entry name" value="SSF50447"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52156">
        <property type="entry name" value="SSF52156"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00487">
        <property type="entry name" value="IF-2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00231">
        <property type="entry name" value="small_GTP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51722">
        <property type="entry name" value="G_TR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01176">
        <property type="entry name" value="IF2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="8 9" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="5 9 10" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="6 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7 9 10" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tr-type G" evidence="12">
        <location>
            <begin position="410"/>
            <end position="577"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="1"/>
            <end position="321"/>
        </location>
    </feature>
    <feature type="region of interest" description="G-domain" evidence="9">
        <location>
            <begin position="413"/>
            <end position="561"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="11">
        <location>
            <begin position="120"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="11">
        <location>
            <begin position="204"/>
            <end position="251"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="11">
        <location>
            <begin position="303"/>
            <end position="321"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="419"/>
            <end position="426"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="465"/>
            <end position="469"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="519"/>
            <end position="522"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007733"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00020675"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022540"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00100"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU000644"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS51722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="CTQ71381.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="912" mass="98825" checksum="26A8EFE3F967FDFA" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AA92</accession>
    <name>A0A0M7AA92_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Peptide methionine sulfoxide reductase MsrA</fullName>
            <shortName evidence="4">Protein-methionine-S-oxide reductase</shortName>
            <ecNumber evidence="4">1.8.4.11</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">Peptide-methionine (S)-S-oxide reductase</fullName>
            <shortName evidence="4">Peptide Met(O) reductase</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="primary">msrA2</name>
        <name evidence="4" type="synonym">msrA</name>
        <name evidence="7" type="ORF">LAX5112_02857</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 4">
            <text>[thioredoxin]-disulfide + H2O + L-methionine = [thioredoxin]-dithiol + L-methionine (S)-S-oxide</text>
            <dbReference type="Rhea" id="RHEA:19993"/>
            <dbReference type="Rhea" id="RHEA-COMP:10698"/>
            <dbReference type="Rhea" id="RHEA-COMP:10700"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:50058"/>
            <dbReference type="ChEBI" id="CHEBI:57844"/>
            <dbReference type="ChEBI" id="CHEBI:58772"/>
            <dbReference type="EC" id="1.8.4.11"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2 4">
            <text>[thioredoxin]-disulfide + H2O + L-methionyl-[protein] = [thioredoxin]-dithiol + L-methionyl-(S)-S-oxide-[protein]</text>
            <dbReference type="Rhea" id="RHEA:14217"/>
            <dbReference type="Rhea" id="RHEA-COMP:10698"/>
            <dbReference type="Rhea" id="RHEA-COMP:10700"/>
            <dbReference type="Rhea" id="RHEA-COMP:12313"/>
            <dbReference type="Rhea" id="RHEA-COMP:12315"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16044"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:44120"/>
            <dbReference type="ChEBI" id="CHEBI:50058"/>
            <dbReference type="EC" id="1.8.4.11"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the MsrA Met sulfoxide reductase family.</text>
    </comment>
    <dbReference type="EC" id="1.8.4.11" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71537.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672379.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02857"/>
    <dbReference type="EnsemblBacteria" id="CTQ71537">
        <property type="protein sequence ID" value="CTQ71537"/>
        <property type="gene ID" value="LAX5112_02857"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033744">
        <property type="term" value="F:L-methionine:thioredoxin-disulfide S-oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008113">
        <property type="term" value="F:peptide-methionine (S)-S-oxide reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1060.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01401">
        <property type="entry name" value="MsrA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002569">
        <property type="entry name" value="Met_Sox_Rdtase_MsrA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036509">
        <property type="entry name" value="Met_Sox_Rdtase_MsrA_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01625">
        <property type="entry name" value="PMSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55068">
        <property type="entry name" value="SSF55068"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00401">
        <property type="entry name" value="msrA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 7" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="5">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809229" description="Peptide methionine sulfoxide reductase MsrA" evidence="5">
        <location>
            <begin position="25"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="domain" description="PMSR" evidence="6">
        <location>
            <begin position="26"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="active site" evidence="4">
        <location>
            <position position="33"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001063"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001497"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01401"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF01625"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ71537.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="214" mass="23435" checksum="2557DA71523A8030" modified="2015-12-09" version="1">MKRLAPLALVTLMTGAAYTVPANAETAVFAGGCFWCVESDLEQLPGVRDVVSGYAGGTTQNPTYKNYERGGHREVVQVDFDETKISYGELLAIFLRTVDVTDSGGQFCDRGFGYATAIHPLNAAQQKAAKQEVAKAEKALGRKVVTPIEDAAIFWPAEDYHQGYYKSNQRTLTRFGYVTRADAYKGYRKACGRDARVKQVWGSEAFRGLPQAGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAI5</accession>
    <name>A0A0M7AAI5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Leucine/isoleucine/valine transporter permease subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">LAX5112_03062</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72118.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672535.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03062"/>
    <dbReference type="EnsemblBacteria" id="CTQ72118">
        <property type="protein sequence ID" value="CTQ72118"/>
        <property type="gene ID" value="LAX5112_03062"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015658">
        <property type="term" value="F:branched-chain amino acid transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06581">
        <property type="entry name" value="TM_PBP1_LivM_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001851">
        <property type="entry name" value="ABC_transp_permease"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017778">
        <property type="entry name" value="ABC_transptr_urea_perm_UrtC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043428">
        <property type="entry name" value="LivM-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30482">
        <property type="entry name" value="PTHR30482"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30482:SF4">
        <property type="entry name" value="PTHR30482:SF4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02653">
        <property type="entry name" value="BPD_transp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03408">
        <property type="entry name" value="urea_trans_UrtC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="54"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="130"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="160"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="208"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="259"/>
            <end position="277"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="297"/>
            <end position="320"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="332"/>
            <end position="349"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="368"/>
            <end position="410"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ72118.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="410" mass="43943" checksum="9E3AD05AA085D510" modified="2015-12-09" version="1">MMTSFLFRAMDARAGIFLALLAAVILLVPAGNLLVPESSPFHVPTYAVALMGKYLTYALLALSVDLVWGFCGILSLGHAAFFALGGYAMGMYLMRQIGSRGVYGDPILPDFMVFLNWDALPWFWYGFDMFWFAALMVVLVPGALAFVFGWFAFRSRVTGVYLSIITQALTYALLLAFFRNDMGFGGNNGLTDFKDILGFDIQADTTRAALFAASGIALGLCYIICRAITRSKLGKVLVAVRDAESRTRFLGYRVEHYKLFVWTISAMMAGIAGALYVPQVGIINPGEFAPANSIEVVIWVAVGGRGTLVGAILGAVLVNFAKTWFTAVLPDIWLFALGGLFVVVTLFLPKGIVGTISQGWTALKQRKVSASAESGSGTPPTAPPQSPAAPANIAGPGKGKPLSSEPQPAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="31" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAM9</accession>
    <name>A0A0M7AAM9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 10 11">Chromosomal replication initiator protein DnaA</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="primary">dnaA_2</name>
        <name evidence="10" type="synonym">dnaA</name>
        <name evidence="15" type="ORF">LAX5112_02766</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9 10 11">Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'-TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 10">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 10 12">Belongs to the DnaA family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71280.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672322.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02766"/>
    <dbReference type="EnsemblBacteria" id="CTQ71280">
        <property type="protein sequence ID" value="CTQ71280"/>
        <property type="gene ID" value="LAX5112_02766"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003688">
        <property type="term" value="F:DNA replication origin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006270">
        <property type="term" value="P:DNA replication initiation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006275">
        <property type="term" value="P:regulation of DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd06571">
        <property type="entry name" value="Bac_DnaA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1750.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.180">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00377">
        <property type="entry name" value="DnaA_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001957">
        <property type="entry name" value="Chromosome_initiator_DnaA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020591">
        <property type="entry name" value="Chromosome_initiator_DnaA-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018312">
        <property type="entry name" value="Chromosome_initiator_DnaA_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013317">
        <property type="entry name" value="DnaA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013159">
        <property type="entry name" value="DnaA_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024633">
        <property type="entry name" value="DnaA_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038454">
        <property type="entry name" value="DnaA_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010921">
        <property type="entry name" value="Trp_repressor/repl_initiator"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30050:SF2">
        <property type="entry name" value="PTHR30050:SF2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00308">
        <property type="entry name" value="Bac_DnaA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08299">
        <property type="entry name" value="Bac_DnaA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11638">
        <property type="entry name" value="DnaA_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00051">
        <property type="entry name" value="DNAA"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00760">
        <property type="entry name" value="Bac_DnaA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48295">
        <property type="entry name" value="SSF48295"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00362">
        <property type="entry name" value="DnaA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01008">
        <property type="entry name" value="DNAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 10 11" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 10" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 10 11" id="KW-0235">DNA replication</keyword>
    <keyword evidence="8 10 11" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6 10 11" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA" evidence="13">
        <location>
            <begin position="186"/>
            <end position="315"/>
        </location>
    </feature>
    <feature type="domain" description="Bac_DnaA_C" evidence="14">
        <location>
            <begin position="400"/>
            <end position="469"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <begin position="194"/>
            <end position="201"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006583"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00018893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00024640"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00377"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU000577"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU004227"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="SMART" id="SM00760"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="CTQ71280.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="492" mass="54897" checksum="973C1A27E98804A0" modified="2015-12-09" version="1">MQVQEAGGSEQWTRVKKQLRAELGDDVFTSWFARVDLEEHQDGTVRLSVPTRFLKQWIQNNYNERLMGLWQRECDNVHRIELTVRGAIRPRQVTAVQPSLPAGAAGAQNGSIEARSENLGDATHVTRAQAATAAVGRGDSASDSTRDVLQGAALDPKYTFETFVEGDSNNLALAAARQVASGGAVTFNPLYLHASVGLGKTHLMQAVASKVRNSGRKVLYLTAEHFMYKFVAALKSQSALAFKDNLRTIDLLLIDDMQFLHGKQVQQEFCHTLNALIDGARQVIVAADRPPSDLDTLDDRVRSRLSGGLVVGIQEPDFVLRRSILVSRVEAAHKSYPQFDVPDSVLDYIARHVASSGRDLEGALNRLIAHNQLTNQPITQEMAEMTLRDLVRSSEPRRVKIEDIQRVVSKHYNVTKADLLSARRTRTIVRPRQIAMYLAKVMTPRSLPEIGRRFGNRDHTTVLHAVRKIEEMARADYALAQEIELLKRMLDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AB13</accession>
    <name>A0A0M7AB13_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Putative diguanylate cyclase YdaM</fullName>
            <ecNumber evidence="4">2.7.7.65</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">ydaM_2</name>
        <name evidence="4" type="ORF">LAX5112_02896</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.7.7.65" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71652.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672407.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02896"/>
    <dbReference type="EnsemblBacteria" id="CTQ71652">
        <property type="protein sequence ID" value="CTQ71652"/>
        <property type="gene ID" value="LAX5112_02896"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052621">
        <property type="term" value="F:diguanylate cyclase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd01949">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00130">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.450.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003018">
        <property type="entry name" value="GAF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029016">
        <property type="entry name" value="GAF-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000160">
        <property type="entry name" value="GGDEF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000014">
        <property type="entry name" value="PAS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000700">
        <property type="entry name" value="PAS-assoc_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035965">
        <property type="entry name" value="PAS-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013656">
        <property type="entry name" value="PAS_4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013655">
        <property type="entry name" value="PAS_fold_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01590">
        <property type="entry name" value="GAF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00990">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08447">
        <property type="entry name" value="PAS_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08448">
        <property type="entry name" value="PAS_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00065">
        <property type="entry name" value="GAF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00267">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00091">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55785">
        <property type="entry name" value="SSF55785"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00254">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00229">
        <property type="entry name" value="sensory_box"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50887">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50113">
        <property type="entry name" value="PAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50112">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PAC" evidence="2">
        <location>
            <begin position="261"/>
            <end position="312"/>
        </location>
    </feature>
    <feature type="domain" description="PAS" evidence="1">
        <location>
            <begin position="313"/>
            <end position="363"/>
        </location>
    </feature>
    <feature type="domain" description="GGDEF" evidence="3">
        <location>
            <begin position="731"/>
            <end position="865"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50112"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50113"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ71652.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="877" mass="97069" checksum="B998E37FB0DFA216" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AB36</accession>
    <name>A0A0M7AB36_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03155</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72365.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008193508.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03155"/>
    <dbReference type="EnsemblBacteria" id="CTQ72365">
        <property type="protein sequence ID" value="CTQ72365"/>
        <property type="gene ID" value="LAX5112_03155"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.280.50">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007420">
        <property type="entry name" value="DUF465"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038444">
        <property type="entry name" value="DUF465_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04325">
        <property type="entry name" value="DUF465"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="3"/>
            <end position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72365.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="65" mass="7529" checksum="3811DD850CB65BC8" modified="2015-12-09" version="1">MDTEALRVELAQLRQEHRDLDVAVEALAATPNHDALQLQRLKKKKLMIKDRIMVLEDQLRPDIIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AB53</accession>
    <name>A0A0M7AB53_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Putative cobalamin binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02943</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71831.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672458.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02943"/>
    <dbReference type="EnsemblBacteria" id="CTQ71831">
        <property type="protein sequence ID" value="CTQ71831"/>
        <property type="gene ID" value="LAX5112_02943"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031419">
        <property type="term" value="F:cobalamin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036724">
        <property type="entry name" value="Cobalamin-bd_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52242">
        <property type="entry name" value="SSF52242"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ71831.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="341" mass="37420" checksum="7877C61755960EE4" modified="2015-12-09" version="1">MTPFRKAREADREMRMNGTTELPIETVAARRIEPADGNIYVSDQANMVKTSRLNSGEQETLRNLIQGPVAAMAAEQLSGLLDAGLETDIRYKSVIAEMYERILAPDARIKDHLAFLDGEVRSSFKSNGNPVALPPTAMKVMLLEAVARELGKNWSCDAASFIDVTIASARLQAIAQALTTEAARDRSGSTAPFAVIFLPVDEQHSLMSYLTGALFQALGWQQQVVPHESLSEFEFAKVVTQADVVCIAWSTTYLKSNAIQLINNIRLYSSHKKLPIIAGGAATLDFINPLVEMGVDCICDSALSAVKTAESFYNLEKINHFAAQEGRDAKRRKSSIDRHSQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AB57</accession>
    <name>A0A0M7AB57_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02634</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70864.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70864">
        <property type="protein sequence ID" value="CTQ70864"/>
        <property type="gene ID" value="LAX5112_02634"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ70864.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="123" mass="14259" checksum="682DA568CA4EE188" modified="2015-12-09" version="1">MARYYVSVTGLRLKSWFHAVRFWRHAIPSFNQAKAAEGNILTDTRTVRGVHHTLTVWTSETAMKRYLYRGAHRQAIKAFPLIATGSTCGYHADDIPSWQEALEYWERHGRDYETPMTDSTRSP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AB83</accession>
    <name>A0A0M7AB83_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02679</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70993.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672241.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70993">
        <property type="protein sequence ID" value="CTQ70993"/>
        <property type="gene ID" value="LAX5112_02679"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ70993.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="90" mass="8532" checksum="1F3A9B627B4BC22C" modified="2015-12-09" version="1">MKPAIALLSLTLLLAGCVNTESQRDRMLIGAGLGAATGATIGAAAGSTGGAALAGAALGAIGGGLIGVVTSPRNCIARDPEGTPYTVPCP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABB8</accession>
    <name>A0A0M7ABB8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">EIIAB-Man</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">manX</name>
        <name evidence="4" type="ORF">LAX5112_02911</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71696.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008193884.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02911"/>
    <dbReference type="EnsemblBacteria" id="CTQ71696">
        <property type="protein sequence ID" value="CTQ71696"/>
        <property type="gene ID" value="LAX5112_02911"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009401">
        <property type="term" value="P:phosphoenolpyruvate-dependent sugar phosphotransferase system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00006">
        <property type="entry name" value="PTS_IIA_man"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.510">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004701">
        <property type="entry name" value="PTS_EIIA_man-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036662">
        <property type="entry name" value="PTS_EIIA_man-typ_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033887">
        <property type="entry name" value="PTS_IIA_man"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03610">
        <property type="entry name" value="EIIA-man"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53062">
        <property type="entry name" value="SSF53062"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51096">
        <property type="entry name" value="PTS_EIIA_TYPE_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PTS EIIA type-4" evidence="3">
        <location>
            <begin position="1"/>
            <end position="123"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51096"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ71696.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="134" mass="14208" checksum="6ECB01AD6DD497C8" modified="2015-12-09" version="1">MIGLVLVTHGRLAEEFKAALEHVVGPQEQVETISIGPDDDMEQRRQDILAAVDAANTGKGVVLLTDMFGGTPSNLAISVMDSKSVEVVAGVNLPMLIKLASVRADRELPQAVDEARQAGQKYISVASQVLSGQN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABQ0</accession>
    <name>A0A0M7ABQ0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Sensory transduction protein regX3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">regX3</name>
        <name evidence="3" type="ORF">LAX5112_03039</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72077.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672523.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03039"/>
    <dbReference type="EnsemblBacteria" id="CTQ72077">
        <property type="protein sequence ID" value="CTQ72077"/>
        <property type="gene ID" value="LAX5112_03039"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039420">
        <property type="entry name" value="WalR-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48111">
        <property type="entry name" value="PTHR48111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="2">
        <location>
            <begin position="2"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="1">
        <location>
            <position position="51"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ72077.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="113" mass="12062" checksum="ABC6EC718C08A909" modified="2015-12-09" version="1">MIVHIVEDDRAVADALYIVLGELGYLPTVYSDGETFLAEATVSAKDIVLLDLGLPGMSGVDVAHQLNSRASAPRIIAISGKTRAGLNRHLRDLPDMPLLRKPLSMEALAEAVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AC23</accession>
    <name>A0A0M7AC23_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Glyceraldehyde-3-phosphate dehydrogenase</fullName>
            <ecNumber evidence="8">1.2.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">gap_2</name>
        <name evidence="10" type="ORF">LAX5112_03178</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 7">Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.2.1.-" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72429.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672701.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03178"/>
    <dbReference type="EnsemblBacteria" id="CTQ72429">
        <property type="protein sequence ID" value="CTQ72429"/>
        <property type="gene ID" value="LAX5112_03178"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050661">
        <property type="term" value="F:NADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016620">
        <property type="term" value="F:oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006006">
        <property type="term" value="P:glucose metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020831">
        <property type="entry name" value="GlycerAld/Erythrose_P_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020830">
        <property type="entry name" value="GlycerAld_3-P_DH_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020829">
        <property type="entry name" value="GlycerAld_3-P_DH_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020828">
        <property type="entry name" value="GlycerAld_3-P_DH_NAD(P)-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006424">
        <property type="entry name" value="Glyceraldehyde-3-P_DH_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43148">
        <property type="entry name" value="PTHR43148"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02800">
        <property type="entry name" value="Gp_dh_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00044">
        <property type="entry name" value="Gp_dh_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000149">
        <property type="entry name" value="GAP_DH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00078">
        <property type="entry name" value="G3PDHDRGNASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM00846">
        <property type="entry name" value="Gp_dh_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01534">
        <property type="entry name" value="GAPDH-I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00071">
        <property type="entry name" value="GAPDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0520">NAD</keyword>
    <keyword evidence="5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="2 8 10" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Gp_dh_N" evidence="9">
        <location>
            <begin position="3"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="region of interest" description="Glyceraldehyde 3-phosphate binding" evidence="4">
        <location>
            <begin position="153"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="region of interest" description="Glyceraldehyde 3-phosphate binding" evidence="4">
        <location>
            <begin position="212"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="3">
        <location>
            <position position="154"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="12"/>
            <end position="13"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="36"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="81"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="123"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="184"/>
        </location>
        <ligand>
            <name>D-glyceraldehyde 3-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:59776"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="235"/>
        </location>
        <ligand>
            <name>D-glyceraldehyde 3-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:59776"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="317"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="site" description="Activates thiol group during catalysis" evidence="6">
        <location>
            <position position="181"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007406"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR000149-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR000149-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR000149-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR000149-4"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU000397"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU361160"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="SMART" id="SM00846"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ72429.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="336" mass="35764" checksum="3AEFCAC68645B626" modified="2015-12-09" version="1">MVTKVAINGFGRIGRNILRAIVESGRTDIEVVGINDLGPVETNAHLLRYDSVHGKFPATVTVDGDTISIDGGKPIRVTAIRDPKDLPWGELGVDIAMECTGIFNSKDKAAAHLDAGAKRVLVSAPASGADKTIVYGVNHDTLTAEDLVVSNASCTTNCLAPVAKVLHDSVGIEKGMMTTIHSYTGDQPTLDTMHKDLYRARAAAMSMIPTSTGAAKAVGLVLPELNGKLDGFAMRVPTPNVSVVDLKFIAKRETTVEEINAAVKAAAGGALKGVLGYTEDKNVSVDFNHDPHSSIYHMDQTKVMDGTMVSVLSWYDNEWGFSNRMADTAIAMAKLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACD9</accession>
    <name>A0A0M7ACD9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system</fullName>
            <ecNumber evidence="2">2.3.1.12</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">acoC_1</name>
        <name evidence="2" type="ORF">LAX5112_03132</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.3.1.12" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72301.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672602.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72301">
        <property type="protein sequence ID" value="CTQ72301"/>
        <property type="gene ID" value="LAX5112_03132"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004742">
        <property type="term" value="F:dihydrolipoyllysine-residue acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000073">
        <property type="entry name" value="AB_hydrolase_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12697">
        <property type="entry name" value="Abhydrolase_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00111">
        <property type="entry name" value="ABHYDROLASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="AB hydrolase-1" evidence="1">
        <location>
            <begin position="61"/>
            <end position="306"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12697"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72301.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="327" mass="35420" checksum="356559B7929EFEA4" modified="2015-12-09" version="1">MLSVLLAILVVFASLAGYSALRFHQIRRSIRPDGEMCTVDGVQLHYHFFSAENGSPDTPTLVFLHGASGNAYDSQLAFLKPLKGRYPLLFVDRPGLGFSGAIPDGKNSPARQAELIEGLLRELGIDQCIAIGHSLGASVTAALGLRAPDRICGLAFLAPATHPWPGGVAWYYHVAAAPVIGWLFCRILTLPVAEYLAPRSIRHVFHPEPQPESYNQATRLPLLFLPDAFRSNATDIARLKPHVTAQSKDYGDLEQPAVILTGTEDTVVWPSIHSEGLLRDLPNAELVVLEGAGHMPHHTRTEAIVEVLDQLVLRVGKAAVSEGRSSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACE1</accession>
    <name>A0A0M7ACE1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Aliphatic amidase expression-regulating protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">amiC_1</name>
        <name evidence="1" type="ORF">LAX5112_03064</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72122.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03064"/>
    <dbReference type="EnsemblBacteria" id="CTQ72122">
        <property type="protein sequence ID" value="CTQ72122"/>
        <property type="gene ID" value="LAX5112_03064"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd06355">
        <property type="entry name" value="PBP1_FmdD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017777">
        <property type="entry name" value="ABC_urea-bd_UrtA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03407">
        <property type="entry name" value="urea_ABC_UrtA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ72122.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="427" mass="46100" checksum="DC7F74E3FAAFA9ED" modified="2015-12-09" version="1">MTKTFKQLMLGGLMASTMIGGAAAEETIKVGILHSLSGTMAISETTLKDAMLMLIEEQNKKGGILGKKLEAVVVDPASDWPLFAEKARELIEVNGVDAVFGCWTSVSRKSVLPVFEELNSLLFYPVQYEGEESQRNVFYTGAAPNQQAIPAVDYLMNEEGVERWVLAGTDYVYPRTTNKILEAYLKSKGVAEEDIMINYTPFGHSDWQTIVSDIKGFGSAGKKTAVVSTINGDANVPFYKELGNAGIKAEDIPVVAFSVGEEELAGLDTAPLVGHLAAWNYFQSADTDANAEFIETWQAFVGDEERVTNDPMEAHYIGFNMWVEAVTKAGTTDPDAVIDAIVGVSVPNLTGGYSAMMPNHHITKPVLIGEIQDDGQFETVWETSGLVVGDAWSDYLDGSKDLIADWRAPLSCGNFNTATGKCGGSGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADK8</accession>
    <name>A0A0M7ADK8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DNA-directed DNA polymerase</fullName>
            <ecNumber evidence="1">2.7.7.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">dnaE1</name>
        <name evidence="8" type="ORF">LAX5112_03466</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>a 2'-deoxyribonucleoside 5'-triphosphate + DNA(n) = diphosphate + DNA(n+1)</text>
            <dbReference type="Rhea" id="RHEA:22508"/>
            <dbReference type="Rhea" id="RHEA-COMP:17339"/>
            <dbReference type="Rhea" id="RHEA-COMP:17340"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:61560"/>
            <dbReference type="ChEBI" id="CHEBI:173112"/>
            <dbReference type="EC" id="2.7.7.7"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.7.7" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73225.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672860.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03466"/>
    <dbReference type="EnsemblBacteria" id="CTQ73225">
        <property type="protein sequence ID" value="CTQ73225"/>
        <property type="gene ID" value="LAX5112_03466"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008408">
        <property type="term" value="F:3'-5' exonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003887">
        <property type="term" value="F:DNA-directed DNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.1600">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011708">
        <property type="entry name" value="DNA_pol3_alpha_NTPase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041931">
        <property type="entry name" value="DNA_pol3_alpha_thumb_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040982">
        <property type="entry name" value="DNA_pol3_finger"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029460">
        <property type="entry name" value="DNAPol_HHH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004013">
        <property type="entry name" value="PHP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003141">
        <property type="entry name" value="Pol/His_phosphatase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016195">
        <property type="entry name" value="Pol/histidinol_Pase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004805">
        <property type="entry name" value="PolC_alpha"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32294">
        <property type="entry name" value="PTHR32294"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07733">
        <property type="entry name" value="DNA_pol3_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17657">
        <property type="entry name" value="DNA_pol3_finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14579">
        <property type="entry name" value="HHH_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02811">
        <property type="entry name" value="PHP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00481">
        <property type="entry name" value="POLIIIAc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89550">
        <property type="entry name" value="SSF89550"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00594">
        <property type="entry name" value="polc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0235">DNA replication</keyword>
    <keyword evidence="5" id="KW-0239">DNA-directed DNA polymerase</keyword>
    <keyword evidence="3 8" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 8" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="POLIIIAc" evidence="7">
        <location>
            <begin position="25"/>
            <end position="92"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00024632"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="SMART" id="SM00481"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ73225.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="1164" mass="128751" checksum="30F971A6922F566F" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AE47</accession>
    <name>A0A0M7AE47_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DNA binding domain, excisionase family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03443</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73159.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672849.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ73159">
        <property type="protein sequence ID" value="CTQ73159"/>
        <property type="gene ID" value="LAX5112_03443"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009061">
        <property type="entry name" value="DNA-bd_dom_put_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041657">
        <property type="entry name" value="HTH_17"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010093">
        <property type="entry name" value="SinI_DNA-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12728">
        <property type="entry name" value="HTH_17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46955">
        <property type="entry name" value="SSF46955"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01764">
        <property type="entry name" value="excise"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH_17" evidence="1">
        <location>
            <begin position="6"/>
            <end position="55"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12728"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73159.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="63" mass="7353" checksum="3FED020AF712969E" modified="2015-12-09" version="1">MLSKPFLTTHEIAELLKVREPTVRTWIHQEELRAVKLGREFRVAVKDLEAFVNAHATRAPSWK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEA7</accession>
    <name>A0A0M7AEA7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03288</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72762.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672714.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72762">
        <property type="protein sequence ID" value="CTQ72762"/>
        <property type="gene ID" value="LAX5112_03288"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="252"/>
            <end position="288"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="295"/>
            <end position="314"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="264"/>
            <end position="279"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72762.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="314" mass="34281" checksum="BCA0FAADE2245C69" modified="2015-12-09" version="1">MHNQIPVSSTSGTHFGSQGAYAPETANLPIELRESVDTALQECFDKIYCSDELLGNKLTQVKGPLDSLSKRHGILLEEAIAHAFVATAGDRYEVQKQVGVKISREAMSLVESNQLAKLEGLNLPIDNTHGKKAMIDIVVFDHETGDLHVISVKRGGGAQGGSEARNARPDLMAAGLMLKNHTLRKGLPVLAVRQVLVDWYGRSGIVGRPTVTRTTVDEYFGIPISGFVEAMSAYMSSSIAQRMMPRLMTAIGGTSQMTDRPTENESRPPLRERGDASDNVHVRTNPTVRHTLAECLSDLPPRRQGRQMRRVGSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEM5</accession>
    <name>A0A0M7AEM5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Gamma-butyrobetaine dioxygenase</fullName>
            <ecNumber evidence="9">1.14.11.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">LAX5112_03348</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Fe(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29033"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the gamma-BBH/TMLD family.</text>
    </comment>
    <dbReference type="EC" id="1.14.11.1" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72882.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672762.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03348"/>
    <dbReference type="EnsemblBacteria" id="CTQ72882">
        <property type="protein sequence ID" value="CTQ72882"/>
        <property type="gene ID" value="LAX5112_03348"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008336">
        <property type="term" value="F:gamma-butyrobetaine dioxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.2020.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.130.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010376">
        <property type="entry name" value="GBBH-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038492">
        <property type="entry name" value="GBBH-like_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042098">
        <property type="entry name" value="TauD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003819">
        <property type="entry name" value="TauD/TfdA-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06155">
        <property type="entry name" value="GBBH-like_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02668">
        <property type="entry name" value="TauD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 9" id="KW-0223">Dioxygenase</keyword>
    <keyword evidence="6" id="KW-0408">Iron</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5 9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GBBH-like_N" evidence="8">
        <location>
            <begin position="5"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="domain" description="TauD" evidence="7">
        <location>
            <begin position="138"/>
            <end position="354"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001954"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008654"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022964"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF02668"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF06155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ72882.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="369" mass="41673" checksum="40A49E10E8F26301" modified="2015-12-09" version="1">MTSITLRGSDRVLNVAWADGTSADFPFLWLRDNCPSGFHPQTHEREFDLTGIPVTLGVLSAELDGEAIRIEWEGEEHQSRFDADWLKAHRPGIGLKDPANIPPTLWRGDFQPADLPRIRAADLMNDDEALLWFLIETKKTGLAIVDGMADDREAGMAAAKRIGFLRETNFGVTFEVRSMPNPNNLAYTSHALPLHTDLANQELPPGFQFLHCLANDAEGGGSTFCDGFAIAEDLRQNDPEAFELLSKTPVPFRFHDDSYDIRRHQTVIDLDAFGNLQELHFNAHLAGVFDLAADKMEAYYRAYRKIMQMTRSSDYVITTRLEGGEMVIFDNRRVLHGRAAFDPNTGYRHLRGCYVDRGEFDSRIRVLSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="32" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHB7</accession>
    <name>A0A0M7AHB7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Regulatory protein of adaptative response</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">ada_2</name>
        <name evidence="9" type="ORF">LAX5112_03595</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>a 4-O-methyl-thymidine in DNA + L-cysteinyl-[protein] = a thymidine in DNA + S-methyl-L-cysteinyl-[protein]</text>
            <dbReference type="Rhea" id="RHEA:53428"/>
            <dbReference type="Rhea" id="RHEA-COMP:10131"/>
            <dbReference type="Rhea" id="RHEA-COMP:10132"/>
            <dbReference type="Rhea" id="RHEA-COMP:13555"/>
            <dbReference type="Rhea" id="RHEA-COMP:13556"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:82612"/>
            <dbReference type="ChEBI" id="CHEBI:137386"/>
            <dbReference type="ChEBI" id="CHEBI:137387"/>
            <dbReference type="EC" id="2.1.1.63"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>a 6-O-methyl-2'-deoxyguanosine in DNA + L-cysteinyl-[protein] = a 2'-deoxyguanosine in DNA + S-methyl-L-cysteinyl-[protein]</text>
            <dbReference type="Rhea" id="RHEA:24000"/>
            <dbReference type="Rhea" id="RHEA-COMP:10131"/>
            <dbReference type="Rhea" id="RHEA-COMP:10132"/>
            <dbReference type="Rhea" id="RHEA-COMP:11367"/>
            <dbReference type="Rhea" id="RHEA-COMP:11368"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:82612"/>
            <dbReference type="ChEBI" id="CHEBI:85445"/>
            <dbReference type="ChEBI" id="CHEBI:85448"/>
            <dbReference type="EC" id="2.1.1.63"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="7">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="7">Binds 1 zinc ion per subunit.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73610.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672951.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03595"/>
    <dbReference type="EnsemblBacteria" id="CTQ73610">
        <property type="protein sequence ID" value="CTQ73610"/>
        <property type="gene ID" value="LAX5112_03595"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003908">
        <property type="term" value="F:methylated-DNA-[protein]-cysteine S-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06445">
        <property type="entry name" value="ATase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035451">
        <property type="entry name" value="Ada-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004026">
        <property type="entry name" value="Ada_DNA_repair_Zn-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016221">
        <property type="entry name" value="Bifunct_regulatory_prot_Ada"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001497">
        <property type="entry name" value="MethylDNA_cys_MeTrfase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014048">
        <property type="entry name" value="MethylDNA_cys_MeTrfase_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036217">
        <property type="entry name" value="MethylDNA_cys_MeTrfase_DNAb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036631">
        <property type="entry name" value="MGMT_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02805">
        <property type="entry name" value="Ada_Zn_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01035">
        <property type="entry name" value="DNA_binding_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000409">
        <property type="entry name" value="Ada"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46767">
        <property type="entry name" value="SSF46767"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53155">
        <property type="entry name" value="SSF53155"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57884">
        <property type="entry name" value="SSF57884"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00589">
        <property type="entry name" value="ogt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00374">
        <property type="entry name" value="MGMT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0227">DNA damage</keyword>
    <keyword evidence="5" id="KW-0234">DNA repair</keyword>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="7" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="8">
        <location>
            <begin position="107"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile; methyl group acceptor from methylphosphotriester" evidence="6">
        <location>
            <position position="37"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile; methyl group acceptor from either O6-methylguanine or O4-methylthymine" evidence="6">
        <location>
            <position position="318"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="37"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="41"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="68"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="71"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001286"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001596"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR000409-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR000409-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ73610.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="353" mass="39057" checksum="131D82D32791B9C3" modified="2015-12-09" version="1">MLKIRPDFDTLYGALLNRDPSYDGRMFVCVASTGIFCRLTCPARKPKRENCTFHETVAECIDAGFRPCKRCKPTTPEASADPVIKALISELERRPAYRWGEPDLHRMGLDPSTVRRSFKRHFGMTFLEMARQRRLQEGFSALADGGKVIEAQVSAGFDSASAFREAFAKTLGQAPGAFSTDPLLKADWVSTPLGPMIAIADQSQLHLLEFLDRKALPTEVKKLQRNANGSLGFGRTKIIDQIQDELTGFFEGRKAVFETPLALHGTPFTRDVWRELLKIPAGGIRSYSEVAQALGRPEAVRAVARANGANQIAVVIPCHRVMGADGSLTGYGGGLWRKQKLIELERSYRLADS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AK88</accession>
    <name>A0A0M7AK88_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Polyol:NADP oxidoreductase</fullName>
            <ecNumber evidence="3">1.1.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">por</name>
        <name evidence="3" type="ORF">LAX5112_04289</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.1.1.-" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000022">
        <property type="protein sequence ID" value="CTQ75575.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673522.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000022.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04289"/>
    <dbReference type="EnsemblBacteria" id="CTQ75575">
        <property type="protein sequence ID" value="CTQ75575"/>
        <property type="gene ID" value="LAX5112_04289"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1040.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008927">
        <property type="entry name" value="6-PGluconate_DH-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013328">
        <property type="entry name" value="6PGD_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000669">
        <property type="entry name" value="Mannitol_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013118">
        <property type="entry name" value="Mannitol_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013131">
        <property type="entry name" value="Mannitol_DH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01232">
        <property type="entry name" value="Mannitol_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08125">
        <property type="entry name" value="Mannitol_dh_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00084">
        <property type="entry name" value="MTLDHDRGNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48179">
        <property type="entry name" value="SSF48179"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Mannitol_dh" evidence="1">
        <location>
            <begin position="18"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="domain" description="Mannitol_dh_C" evidence="2">
        <location>
            <begin position="207"/>
            <end position="447"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01232"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF08125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ75575.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="475" mass="51541" checksum="FE16D5E278D64E6D" modified="2015-12-09" version="1">MSVNLSLPDYDRSLLKTRVFHIGFGAFAKAHTAVFQDELLCQSKSDWGMAVARLNSGADELSALDKASGLFTIGEMSDDALALRQVGAVIKTLHPNRDGIDALIAQICEPDLHVVTLTITEKGYGLTRGRLDLENAGIAADLKQPTDPKTAIGLLVEGLRLRSQRKLPGLTILSCDNLPANGKLCGTAVLEFAEKLDPELKDWIFENCRFPCSMVDRITPAMTEASFEKLAGALGTSDPNGILCEPFKQWVIEDSFAGEKPNWDLAGARFVPDVEPYEDIKLRMLNGSHSFLAYLGALAGKETIADCMADPVFKTATQNLMMGEQAPTLSVPGGFDISAYGDELIARFSNQALRHRTTQIASDGSQKLPQRLLAPIRRHIEADRPWPMSALAVAGWMRYCRGTSETGADLPVNDPHASRISELVAGSDDEDYVLNMMLLAGIFGSDLPAEPAFVKQVSHAYKTLKHDGVRAALAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKB2</accession>
    <name>A0A0M7AKB2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Isoquinoline 1-oxidoreductase subunit alpha</fullName>
            <ecNumber evidence="3">1.3.99.16</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">iorA_2</name>
        <name evidence="3" type="ORF">LAX5112_04021</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.3.99.16" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74882.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451073.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04021"/>
    <dbReference type="EnsemblBacteria" id="CTQ74882">
        <property type="protein sequence ID" value="CTQ74882"/>
        <property type="gene ID" value="LAX5112_04021"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051537">
        <property type="term" value="F:2 iron, 2 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047121">
        <property type="term" value="F:isoquinoline 1-oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00207">
        <property type="entry name" value="fer2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002888">
        <property type="entry name" value="2Fe-2S-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036884">
        <property type="entry name" value="2Fe-2S-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036010">
        <property type="entry name" value="2Fe-2S_ferredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001041">
        <property type="entry name" value="2Fe-2S_ferredoxin-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006058">
        <property type="entry name" value="2Fe2S_fd_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012675">
        <property type="entry name" value="Beta-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00111">
        <property type="entry name" value="Fer2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01799">
        <property type="entry name" value="Fer2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47741">
        <property type="entry name" value="SSF47741"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54292">
        <property type="entry name" value="SSF54292"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00197">
        <property type="entry name" value="2FE2S_FER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51085">
        <property type="entry name" value="2FE2S_FER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="2Fe-2S ferredoxin-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ74882.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="153" mass="16240" checksum="846764A2991C1C55" modified="2015-12-09" version="1">MSVTLKINGETRTLDADPESPLLWALRDELGMTGTKFGCGIASCGACTVHWDGMPIRSCQTMVGDLEGAEITTIEGVNGKAAKAVQEAWNELDVPQCGYCQSGQIMAATALLTDTPKPTDEDIDAAMDGNVCRCATYARIRKAIHAAADKMEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKN0</accession>
    <name>A0A0M7AKN0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">2,3-dimethylmalate lyase</fullName>
            <ecNumber evidence="1">4.1.3.32</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">Dml_2</name>
        <name evidence="1" type="ORF">LAX5112_04335</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="4.1.3.32" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000022">
        <property type="protein sequence ID" value="CTQ75705.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673553.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000022.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04335"/>
    <dbReference type="EnsemblBacteria" id="CTQ75705">
        <property type="protein sequence ID" value="CTQ75705"/>
        <property type="gene ID" value="LAX5112_04335"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047529">
        <property type="term" value="F:2,3-dimethylmalate lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd00377">
        <property type="entry name" value="ICL_PEPM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039556">
        <property type="entry name" value="ICL/PEPM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018523">
        <property type="entry name" value="Isocitrate_lyase_ph_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015813">
        <property type="entry name" value="Pyrv/PenolPyrv_Kinase-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040442">
        <property type="entry name" value="Pyrv_Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51621">
        <property type="entry name" value="SSF51621"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00161">
        <property type="entry name" value="ISOCITRATE_LYASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0456">Lyase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ75705.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="288" mass="30534" checksum="9C2CFD0815BF2DEE" modified="2015-12-09" version="1">MSLKKRLQQNEIVIAPGVYDGLTASLAEAAGFEALYLSGAAVAYTRLGRPDIGLSSFTEMADTMALIADRTDLPVIIDADTGFGNALNAQRTMRLYERAGATALQVEDQTYPKRCGHLADKSLIPAAEMAGKVRAMADARASEETLIIARTDAIAVEGFQAAIDRAGAYLEAGADILFIEAPQSREQLTEVATQFAGRVPLLANMVEGGATPISGASDLEAQGYSIVIFPGGIVRALAKTAQEYYASLHANGSNRPFKDRMFDFDGLNGVIGTADMLAKGSSYDPSNR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKX8</accession>
    <name>A0A0M7AKX8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative NUDIX hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04183</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75317.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008193118.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04183"/>
    <dbReference type="EnsemblBacteria" id="CTQ75317">
        <property type="protein sequence ID" value="CTQ75317"/>
        <property type="gene ID" value="LAX5112_04183"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010945">
        <property type="term" value="F:CoA pyrophosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03426">
        <property type="entry name" value="CoAse"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045121">
        <property type="entry name" value="CoAse"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015797">
        <property type="entry name" value="NUDIX_hydrolase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000086">
        <property type="entry name" value="NUDIX_hydrolase_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12992">
        <property type="entry name" value="PTHR12992"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00293">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55811">
        <property type="entry name" value="SSF55811"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51462">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nudix hydrolase" evidence="1">
        <location>
            <begin position="54"/>
            <end position="185"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51462"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75317.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="216" mass="23766" checksum="627AF37CA5B2D01B" modified="2015-12-09" version="1">MTASTDTSATNLTDWSQHLEERLALAASVPTDRETGDHILNPDVGPYAFWKGPPRDAAVLIGIRNTAAGPSVVLTQRTPHLKSHAGQVAFPGGKIDPDDNGPVEAALREAQEEIGLDPAQAQPLGHLAPYLTGSGYRVTPIVAEVRDPVQFVPNPDEVEDVFEVPFEFLMNPANHQKLSREWQGKRRYFYAMPFAGRHIWGVTAGIIRSLYDTVYR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALD2</accession>
    <name>A0A0M7ALD2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="11">D-alanyl-D-alanine carboxypeptidase DacF</fullName>
            <ecNumber evidence="11">3.4.16.4</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">dacF</name>
        <name evidence="11" type="ORF">LAX5112_03914</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 8">Belongs to the peptidase S11 family.</text>
    </comment>
    <dbReference type="EC" id="3.4.16.4" evidence="11"/>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74593.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03914"/>
    <dbReference type="EnsemblBacteria" id="CTQ74593">
        <property type="protein sequence ID" value="CTQ74593"/>
        <property type="gene ID" value="LAX5112_03914"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009002">
        <property type="term" value="F:serine-type D-Ala-D-Ala carboxypeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008360">
        <property type="term" value="P:regulation of cell shape"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.710.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012338">
        <property type="entry name" value="Beta-lactam/transpept-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018044">
        <property type="entry name" value="Peptidase_S11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001967">
        <property type="entry name" value="Peptidase_S11_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00768">
        <property type="entry name" value="Peptidase_S11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00725">
        <property type="entry name" value="DADACBPTASE1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56601">
        <property type="entry name" value="SSF56601"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11" id="KW-0121">Carboxypeptidase</keyword>
    <keyword evidence="3" id="KW-0133">Cell shape</keyword>
    <keyword evidence="5" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="11" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0573">Peptidoglycan synthesis</keyword>
    <keyword evidence="11" id="KW-0645">Protease</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="domain" description="Peptidase_S11" evidence="10">
        <location>
            <begin position="36"/>
            <end position="253"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="365"/>
            <end position="385"/>
        </location>
    </feature>
    <feature type="active site" description="Acyl-ester intermediate" evidence="6">
        <location>
            <position position="61"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="6">
        <location>
            <position position="64"/>
        </location>
    </feature>
    <feature type="active site" evidence="6">
        <location>
            <position position="121"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="223"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007164"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR618044-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR618044-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU004016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF00768"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ74593.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="385" mass="41136" checksum="6275AD2131C2F984" modified="2015-12-09" version="1">MLRFTAIITVLAGLLLGSFSGIGAGVAQEHETLTTPSLVVDLDTGAVLHAEAAGHPWYPASTAKLMTALITFQALERGDVDLSTPVILSHNAMDQSAAYAGLKVGNAMTLEDALYAVLVGSANEVAVALAETVAGTEAAFVDLMNAQADRLGLTATHFTNPNGLFDQKQTVSARDLAVLGRDLFQVYPDYRRMFRTAAVTIDDKELISYNELITRYPGTLGLKTGFVCSAGRNIVAIAERDGKRLLAVVLGATTGRERSERTAKLFDDAFAGNLTANGQALAELPNASETQPEDMRMRLCSNETAVYETGQNRRYPMGLPGAPSYLKDPVSAPTYSFQTWFVPQPEFVPVPSAKPVQAVELMTTPQSSGAKVEIVPPSKPTLPRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMD3</accession>
    <name>A0A0M7AMD3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Acyl-CoA dehydrogenase</fullName>
            <ecNumber evidence="9">1.3.99.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">acdA_2</name>
        <name evidence="9" type="ORF">LAX5112_04298</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 5">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the acyl-CoA dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.3.99.-" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000022">
        <property type="protein sequence ID" value="CTQ75602.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673528.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000022.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04298"/>
    <dbReference type="EnsemblBacteria" id="CTQ75602">
        <property type="protein sequence ID" value="CTQ75602"/>
        <property type="gene ID" value="LAX5112_04298"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016627">
        <property type="term" value="F:oxidoreductase activity, acting on the CH-CH group of donors"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.540.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006091">
        <property type="entry name" value="Acyl-CoA_Oxase/DH_mid-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046373">
        <property type="entry name" value="Acyl-CoA_Oxase/DH_mid-dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036250">
        <property type="entry name" value="AcylCo_DH-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009075">
        <property type="entry name" value="AcylCo_DH/oxidase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013786">
        <property type="entry name" value="AcylCoA_DH/ox_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037069">
        <property type="entry name" value="AcylCoA_DH/ox_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009100">
        <property type="entry name" value="AcylCoA_DH/oxidase_NM_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00441">
        <property type="entry name" value="Acyl-CoA_dh_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02770">
        <property type="entry name" value="Acyl-CoA_dh_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02771">
        <property type="entry name" value="Acyl-CoA_dh_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47203">
        <property type="entry name" value="SSF47203"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56645">
        <property type="entry name" value="SSF56645"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0274">FAD</keyword>
    <keyword evidence="3 5" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="5 9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Acyl-CoA_dh_N" evidence="8">
        <location>
            <begin position="15"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="domain" description="Acyl-CoA_dh_M" evidence="7">
        <location>
            <begin position="122"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="domain" description="Acyl-CoA_dh_1" evidence="6">
        <location>
            <begin position="227"/>
            <end position="376"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009347"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU362125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00441"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF02770"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF02771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ75602.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="389" mass="41580" checksum="77F6FF31DA0337AA" modified="2015-12-09" version="1">MADKSFLSWPFFEDRHRTLAAELEDFAKGFQVDHSDTDQACRSLVKAMGAAGWLQPTASEDGAPLDVRTLCLSREILARHDGLADFALAMQGLGTGALSLFGTAEQKAVWLPKTRSGEAISAFALTEPQSGSDVANSTMTATDDGDSYVLNGEKTWISNGGIADVYTLFARTGEAPGAKGLSAFVVTPDRQGFEVTERLDTIAPHPLATLRFTDCRIKKSDLIGNPGDGFKIAMSVLDIFRSTVAAAALGFARRALDEALERVSTRQIQGAPLADLQMVQGHIADMALDVDAAALLIYRAAWAKDSGAPRVTREAAMAKLFATEQAQQVIDKAVQLHGGDGVRSGETVEKLYREIRALRIYEGATDVQKIVIARQTLGAFAADSANQGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMY3</accession>
    <name>A0A0M7AMY3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Leucine/isoleucine/valine transporter permease subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_04294</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000022">
        <property type="protein sequence ID" value="CTQ75590.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673526.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000022.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04294"/>
    <dbReference type="EnsemblBacteria" id="CTQ75590">
        <property type="protein sequence ID" value="CTQ75590"/>
        <property type="gene ID" value="LAX5112_04294"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015658">
        <property type="term" value="F:branched-chain amino acid transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06581">
        <property type="entry name" value="TM_PBP1_LivM_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001851">
        <property type="entry name" value="ABC_transp_permease"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043428">
        <property type="entry name" value="LivM-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30482">
        <property type="entry name" value="PTHR30482"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02653">
        <property type="entry name" value="BPD_transp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="36"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="63"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="100"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="126"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="169"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="223"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="261"/>
            <end position="285"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="297"/>
            <end position="320"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ75590.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="327" mass="35154" checksum="CB9F6198EA87D44A" modified="2015-12-09" version="1">MTRETMFNSAALAALALVPLWAHFSGEPFTVTLATRAVILALAAVGLHIALGLGGLVSLGHAVFFGIGGYAMGILAHHAQTYTPLMEWPFVIEGTKSMPVIWLVAVILSSVVAYFIGLLSLRTSGVYFIMITLAFGQMFFFFAISWSAYGGEDGLSIYVRNGFPGVNTLVPIQFYGLCFVILAAVMFFAARLQRSPFGLALNAARQVPDRVETVGLNPMRLRLVAFVLSGAITGLAGALFADLNRFVSPTMFSWQMSGELIIFIILGGLGRLYGPVVGAVVFVALEHILGDLSDYWHIYLGVLLLGVVLFARGGIIGMLLGREVAHD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANW0</accession>
    <name>A0A0M7ANW0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04710</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000029">
        <property type="protein sequence ID" value="CTQ76805.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76805">
        <property type="protein sequence ID" value="CTQ76805"/>
        <property type="gene ID" value="LAX5112_04710"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="20"/>
            <end position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76805.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="159" mass="17640" checksum="375DF9292E1E9F92" modified="2015-12-09" version="1">MLALLPRSEAPPRQVLLVELPLPPRERAPAKRAREVLPALPQPIPHPQVADALENPQPESTPPDRAGSGKRQRRLQTRCGGQLRAFRDAFPECREWSNGSPCHARQTGALSLSLLIKKPGRNVPGFYQVIAKADQLSRNDRSLRERLGCFSFRSALASI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANZ8</accession>
    <name>A0A0M7ANZ8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">D-malate degradation protein R</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">dmlR_13</name>
        <name evidence="3" type="ORF">LAX5112_04723</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000029">
        <property type="protein sequence ID" value="CTQ76845.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673895.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000029.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04723"/>
    <dbReference type="EnsemblBacteria" id="CTQ76845">
        <property type="protein sequence ID" value="CTQ76845"/>
        <property type="gene ID" value="LAX5112_04723"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00039">
        <property type="entry name" value="HTHLYSR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ76845.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="298" mass="33639" checksum="55E6E94560AE0566" modified="2015-12-09" version="1">MDWDKLRIFHAAAQAGSFTHAGDTLHMSQSAVSRQVSALEHDLGVPLFHRHARGLLLTEQGELLYRTAGDVLMKLEAVQSRLKDSKDKPSGVLKVTTTVGLGSTWLASRIRSFTDLYPDVELQLIFDNDELDLSMREADVAIRLRQPTQPDLIQRKLFTVHFHVFASPEYIQRFGSPSSIEDIDDHRIITFGEQAPAYLRSMNWLVTAGRVDGKPRQSVLQVNNIIAIKRAVQTGAGIAMLPDYIIDSGRNLVPVLEDQEDKVPSFDTYFVYPSELKNTARVTAFREFLLKNAQNWVY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AP15</accession>
    <name>A0A0M7AP15_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04731</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000029">
        <property type="protein sequence ID" value="CTQ76868.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76868">
        <property type="protein sequence ID" value="CTQ76868"/>
        <property type="gene ID" value="LAX5112_04731"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="35"/>
            <end position="57"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76868.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="64" mass="6991" checksum="57068A867F355C8D" modified="2015-12-09" version="1">MAVLLPLWQRLLITVAAMFAVSFVVSLLWSSLLGWAIPGYVSGVVGGVTALPVWEFLKRIRPGH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AP71</accession>
    <name>A0A0M7AP71_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04221</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75414.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75414">
        <property type="protein sequence ID" value="CTQ75414"/>
        <property type="gene ID" value="LAX5112_04221"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ75414.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="35" mass="4014" checksum="3DED0EE87AAADD4E" modified="2015-12-09" version="1">MELGAAVLCRYRTVEMRLSLLSQDNLNNLIQVSDF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AP84</accession>
    <name>A0A0M7AP84_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04678</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000028">
        <property type="protein sequence ID" value="CTQ76699.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76699">
        <property type="protein sequence ID" value="CTQ76699"/>
        <property type="gene ID" value="LAX5112_04678"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809496" evidence="1">
        <location>
            <begin position="26"/>
            <end position="359"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76699.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="359" mass="40203" checksum="02A5FE6B5C1FEBA6" modified="2015-12-09" version="1">MGQRAIKVISMFLAAHLGLSGIASACAFHNYKPTKTMVDWLLHSDTVALARPNTENAFKYSVSAIYRGSDVATEIPFLIDSSTRRTLAENPNDGVLFGFNNGGVWRRIGYMNTQYRKIAETVLTRAEEWRSAEFHPERFAFFANYQDHPDRTIRYLALQEIDRVPYKLLRTMNVRLSERELMRSLKTMSEINYRSINVLLLGLKGTDTARSYVSQQMLRLAKSDLTSELGAVATALVELEGDKGVETLERLYLNNRTHSLTKLEVIIEALAIHNEIGTEEVRQAIARVLADFLSLRPNAAAIVARQFSSRQDWSFGPKLKALLASPAPMTASSRLIASVYVAQARANRDNAGTKGEISQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APF2</accession>
    <name>A0A0M7APF2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Acyl-CoA dehydrogenase</fullName>
            <ecNumber evidence="9">1.3.99.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">mmgC_5</name>
        <name evidence="9" type="ORF">LAX5112_04320</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 5">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the acyl-CoA dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.3.99.-" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000022">
        <property type="protein sequence ID" value="CTQ75663.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673542.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000022.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04320"/>
    <dbReference type="EnsemblBacteria" id="CTQ75663">
        <property type="protein sequence ID" value="CTQ75663"/>
        <property type="gene ID" value="LAX5112_04320"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003995">
        <property type="term" value="F:acyl-CoA dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.540.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006089">
        <property type="entry name" value="Acyl-CoA_DH_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006091">
        <property type="entry name" value="Acyl-CoA_Oxase/DH_mid-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046373">
        <property type="entry name" value="Acyl-CoA_Oxase/DH_mid-dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036250">
        <property type="entry name" value="AcylCo_DH-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009075">
        <property type="entry name" value="AcylCo_DH/oxidase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013786">
        <property type="entry name" value="AcylCoA_DH/ox_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037069">
        <property type="entry name" value="AcylCoA_DH/ox_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009100">
        <property type="entry name" value="AcylCoA_DH/oxidase_NM_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00441">
        <property type="entry name" value="Acyl-CoA_dh_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02770">
        <property type="entry name" value="Acyl-CoA_dh_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02771">
        <property type="entry name" value="Acyl-CoA_dh_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47203">
        <property type="entry name" value="SSF47203"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56645">
        <property type="entry name" value="SSF56645"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00072">
        <property type="entry name" value="ACYL_COA_DH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00073">
        <property type="entry name" value="ACYL_COA_DH_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0274">FAD</keyword>
    <keyword evidence="3 5" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="5 9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Acyl-CoA_dh_N" evidence="8">
        <location>
            <begin position="6"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="domain" description="Acyl-CoA_dh_M" evidence="7">
        <location>
            <begin position="121"/>
            <end position="220"/>
        </location>
    </feature>
    <feature type="domain" description="Acyl-CoA_dh_1" evidence="6">
        <location>
            <begin position="233"/>
            <end position="380"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009347"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU362125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00441"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF02770"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF02771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ75663.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="386" mass="43318" checksum="E79377DB616DDAF6" modified="2015-12-09" version="1">MHFGLTDEQEMIVSTVRSFVENEIYPHEEMVEKTGQVPHELGEELKQKCIDLGFYACNFPESVGGAGLGHLDFTLVERELGRGSMALNHFFGRPQNILMACEGEQKEKYLLPAVRGEKMDALAMTEPDAGSDVRGMKCQAVRDDGDWVINGSKHFISGAEHADFFIVFVATGVDETPKGPKKRITCFLVDRGTPGFEVRDGYNSVSHKGYKNYILYFDQCRLPDAQVLGEVDGGFEVMNEWLYATRLTVAAMSVGRARRCFDYAVNYAAERKQFGQSIAKFQGVSFQVADMITEIDAADWLTLAGAWRLDQGLPANRDIASAKVYATEMLARVTDTTLQIFGGMGLMDDFPIERFWRDARVERIWDGTSEIQRHIISRDIFRPLGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APT8</accession>
    <name>A0A0M7APT8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Inner membrane protein YiaV</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">yiaV_4</name>
        <name evidence="4" type="ORF">LAX5112_04666</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000028">
        <property type="protein sequence ID" value="CTQ76667.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04666"/>
    <dbReference type="EnsemblBacteria" id="CTQ76667">
        <property type="protein sequence ID" value="CTQ76667"/>
        <property type="gene ID" value="LAX5112_04666"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032317">
        <property type="entry name" value="HlyD_D23"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16576">
        <property type="entry name" value="HlyD_D23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="31"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="domain" description="HlyD_D23" evidence="3">
        <location>
            <begin position="63"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="104"/>
            <end position="155"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF16576"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ76667.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="317" mass="34974" checksum="11C8838B53AD1122" modified="2015-12-09" version="1">MIMAMIAAYLVLLHLLFNVFKVVKASGRNQIIVTIAGCIGIFMFWYVVTYNQPQSNQLLVYRTTVQMVPRVAGRVIEVNVERNTPIKKGDVLFKLDPRAYQYKLDRLNAELELAKIRLNQATILAERNSGPLVDVQRREAEVNSLEAQVDSAELDLAETVVYAPSNGYVTAMLLQPGFVATQFRPALTFIDTDNVFLGAAFKQQSLQLAQVGDPAEIALDRYPGRIFAGTVSRITEASGSGILAANSPVPTFTEQGTPHARFFVQFKLDNADLAQSLPPGASGAAAIYSSKGIQQTSMIRRVAIRFYTFFNYILPDG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQ71</accession>
    <name>A0A0M7AQ71_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">L-fuculose phosphate aldolase</fullName>
            <ecNumber evidence="2">4.1.2.17</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">fucA_2</name>
        <name evidence="2" type="ORF">LAX5112_04582</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="4.1.2.17" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000026">
        <property type="protein sequence ID" value="CTQ76400.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673771.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000026.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04582"/>
    <dbReference type="EnsemblBacteria" id="CTQ76400">
        <property type="protein sequence ID" value="CTQ76400"/>
        <property type="gene ID" value="LAX5112_04582"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008738">
        <property type="term" value="F:L-fuculose-phosphate aldolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.225.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001303">
        <property type="entry name" value="Aldolase_II/adducin_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036409">
        <property type="entry name" value="Aldolase_II/adducin_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00596">
        <property type="entry name" value="Aldolase_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01007">
        <property type="entry name" value="Aldolase_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53639">
        <property type="entry name" value="SSF53639"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aldolase_II" evidence="1">
        <location>
            <begin position="9"/>
            <end position="188"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM01007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76400.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="215" mass="22925" checksum="F0FD88CEA8AE97CB" modified="2015-12-09" version="1">MSAITKAREQITVMAKSLYDRGLTHGSTGNISMRLDDGTYLVTPTGSSMGFLDPARISHLSETWALLSGDVPTKEIPLHTAFYETRGATGAVVHLHSCHSVALSLLPEIDQDNVLPPLTAYGIMLLGKVKLLPFFVPGDTAMGSAIRGLAGKRSAVILANHGPCVAAKNLEAAVYAMEELEATAKLALLLRGTSPSLLAPEQISQIVTRFDVDWT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQD8</accession>
    <name>A0A0M7AQD8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04727</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000029">
        <property type="protein sequence ID" value="CTQ76857.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673899.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000029.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76857">
        <property type="protein sequence ID" value="CTQ76857"/>
        <property type="gene ID" value="LAX5112_04727"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10600">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021866">
        <property type="entry name" value="SpoIIAA-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038396">
        <property type="entry name" value="SpoIIAA-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036513">
        <property type="entry name" value="STAS_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11964">
        <property type="entry name" value="SpoIIAA-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52091">
        <property type="entry name" value="SSF52091"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ76857.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="122" mass="13651" checksum="723293412ABA4677" modified="2015-12-09" version="1">MLAIEKQEEDRVFVHLCGPLNADLMQAGLEDLIEAAEDLTNGTMLYVIDDFEWPTAGALAVELKMMPDLLRLLGKFRKCAVLCDAGWIRKVAEIEGMLIPGLEIKSFVSKDREAAENWLTRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AR94</accession>
    <name>A0A0M7AR94_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Ribose import ATP-binding protein RbsA</fullName>
            <ecNumber evidence="5">3.6.3.17</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">rbsA_5</name>
        <name evidence="5" type="ORF">LAX5112_04556</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.6.3.17" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000026">
        <property type="protein sequence ID" value="CTQ76323.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673751.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000026.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04556"/>
    <dbReference type="EnsemblBacteria" id="CTQ76323">
        <property type="protein sequence ID" value="CTQ76323"/>
        <property type="gene ID" value="LAX5112_04556"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="9"/>
            <end position="249"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="41"/>
            <end position="48"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ76323.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="262" mass="28245" checksum="78E547FF2D4058B5" modified="2015-12-09" version="1">MTASHAPIIQMQGIEKHFGSVIALAGVSVDIYPGECHCLLGDNGAGKSTFIKTMSGVHKPTKGEILFEGRPMHFSDPRDAISAGIATVYQDLAMIPLMSVSRNFFMGNEPIRRLGPLKLFDHDYANRVTMEEMRKMGINLRGPDQAVGTLSGGERQTVAIARAVHFGAKVLILDEPTSALGVRQTANVLATIDKVRKQDIAVVFITHNVRHALAVGDRFTVLNRGKTLGTAQRGQITPDELQDMMAGGQELVALEDSLGGTV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AS58</accession>
    <name>A0A0M7AS58_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Translation initiation factor IF-3</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">infC</name>
        <name evidence="7" type="ORF">LAX5112_04854</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Monomer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the IF-3 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000032">
        <property type="protein sequence ID" value="CTQ77256.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04854"/>
    <dbReference type="EnsemblBacteria" id="CTQ77256">
        <property type="protein sequence ID" value="CTQ77256"/>
        <property type="gene ID" value="LAX5112_04854"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003743">
        <property type="term" value="F:translation initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036788">
        <property type="entry name" value="T_IF-3_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036787">
        <property type="entry name" value="T_IF-3_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019813">
        <property type="entry name" value="Translation_initiation_fac3_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001288">
        <property type="entry name" value="Translation_initiation_fac_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019815">
        <property type="entry name" value="Translation_initiation_fac_3_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019814">
        <property type="entry name" value="Translation_initiation_fac_3_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10938">
        <property type="entry name" value="PTHR10938"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00707">
        <property type="entry name" value="IF3_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05198">
        <property type="entry name" value="IF3_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54364">
        <property type="entry name" value="SSF54364"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55200">
        <property type="entry name" value="SSF55200"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00168">
        <property type="entry name" value="infC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00938">
        <property type="entry name" value="IF3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 4 7" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="3 4" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="IF3_N" evidence="6">
        <location>
            <begin position="2"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="domain" description="IF3_C" evidence="5">
        <location>
            <begin position="45"/>
            <end position="129"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005439"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022540"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU000646"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00707"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF05198"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ77256.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="131" mass="15251" checksum="6F2EFFBB6EBD718D" modified="2015-12-09" version="1">MDAGLDLVEIQPNANPPVCKILDYGRYKYQAQKKAAEARKKQKTVEIKEIKMRPNIDTHDYEVKMKNMLRFFNDGDKVKVTLRFRGREMAHQDLGMKLLHKVRDETSEIAKVESHPKLEGRQMVMVLAPIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASD9</accession>
    <name>A0A0M7ASD9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Bifunctional protein aas</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">aas</name>
        <name evidence="4" type="ORF">LAX5112_04607</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000027">
        <property type="protein sequence ID" value="CTQ76484.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04607"/>
    <dbReference type="EnsemblBacteria" id="CTQ76484">
        <property type="protein sequence ID" value="CTQ76484"/>
        <property type="gene ID" value="LAX5112_04607"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016746">
        <property type="term" value="F:acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12780">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045851">
        <property type="entry name" value="AMP-bd_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020845">
        <property type="entry name" value="AMP-binding_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000873">
        <property type="entry name" value="AMP-dep_Synth/Lig"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042099">
        <property type="entry name" value="ANL_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002123">
        <property type="entry name" value="Plipid/glycerol_acylTrfase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01553">
        <property type="entry name" value="Acyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00501">
        <property type="entry name" value="AMP-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00563">
        <property type="entry name" value="PlsC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00455">
        <property type="entry name" value="AMP_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="33"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="104"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="138"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="168"/>
            <end position="186"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="225"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="258"/>
            <end position="278"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="285"/>
            <end position="307"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="327"/>
            <end position="352"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="364"/>
            <end position="385"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="391"/>
            <end position="412"/>
        </location>
    </feature>
    <feature type="domain" description="PlsC" evidence="3">
        <location>
            <begin position="449"/>
            <end position="559"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00563"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ76484.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="1131" mass="120580" checksum="45205E268DC22604" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASK8</accession>
    <name>A0A0M7ASK8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Lipopolysaccharide 1,2-N-acetylglucosaminetransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_04925</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000035">
        <property type="protein sequence ID" value="CTQ77491.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674068.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000035.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04925"/>
    <dbReference type="EnsemblBacteria" id="CTQ77491">
        <property type="protein sequence ID" value="CTQ77491"/>
        <property type="gene ID" value="LAX5112_04925"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016757">
        <property type="term" value="F:glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001296">
        <property type="entry name" value="Glyco_trans_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028098">
        <property type="entry name" value="Glyco_trans_4-like_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13439">
        <property type="entry name" value="Glyco_transf_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00534">
        <property type="entry name" value="Glycos_transf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glyco_trans_4-like_N" evidence="2">
        <location>
            <begin position="15"/>
            <end position="219"/>
        </location>
    </feature>
    <feature type="domain" description="Glycos_transf_1" evidence="1">
        <location>
            <begin position="235"/>
            <end position="387"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00534"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13439"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ77491.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="413" mass="45683" checksum="68A69E0CD1D55BC0" modified="2015-12-09" version="1">MKVLHLAHNHPAFHAGGTEIFAKELSAELEKSSGVSSTFLAAALKQHRRPHPGTSFAMEQEHAADFVITGGHFTPVSLSQSDTYGFLNELARLLSDLQPDIVHIHHVLLFGIETFAVIRNALPDAKIVMTLHDYYLICANDGLMRTTQGRLCETASPTKCSRCISSETEVTMALREQTVRTALRVVDEFVAPSEFLKSVFVKWGLRADKIRVIHNGYPLSTIETPAQETISPSYDFGFFGHLNEAKGAKVFLEACQRLQDQTHGALNAAVYGSDRFAPDSQKEALAELKTALGAKVSFFGDYERRSVVRLMQSVRWVVVPSVWWENDPLTVQEAKIARRPILCSDIGGMAERVVPGKDGYHFRSGDAGALASLMQEIISGSRSLEKTEDTSTAMPGCVEAYREVYRDVLNDRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASL6</accession>
    <name>A0A0M7ASL6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">DUF1232 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_04852</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000032">
        <property type="protein sequence ID" value="CTQ77250.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451057.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000032.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04852"/>
    <dbReference type="EnsemblBacteria" id="CTQ77250">
        <property type="protein sequence ID" value="CTQ77250"/>
        <property type="gene ID" value="LAX5112_04852"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010652">
        <property type="entry name" value="DUF1232"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016983">
        <property type="entry name" value="UCP031804"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06803">
        <property type="entry name" value="DUF1232"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF031804">
        <property type="entry name" value="UCP031804"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="domain" description="DUF1232" evidence="6">
        <location>
            <begin position="65"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF06803"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ77250.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="126" mass="13796" checksum="DA225441833BAEE0" modified="2015-12-09" version="1">MTSSSPFEDLGFDPEILGPEEEQNETVRQKLLKTARKAARQIPFMEDVVAGYYCALDPATPTKVRGTLLAALAYFVLPLDVVPDFILGVGFGDDATVLMAAISMIRAHIRPDHYQAARDALEDGEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASV5</accession>
    <name>A0A0M7ASV5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_04729</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000029">
        <property type="protein sequence ID" value="CTQ76863.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76863">
        <property type="protein sequence ID" value="CTQ76863"/>
        <property type="gene ID" value="LAX5112_04729"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809704" evidence="2">
        <location>
            <begin position="30"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="65"/>
            <end position="105"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ76863.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="105" mass="11229" checksum="3286CF8E7CD75B8C" modified="2015-12-09" version="1">MLLMARTVLSAFGATIVSAGLLFSGGSVAEAQSVQPRGVIQPGTTLGPSAQQQLNQNLNRQQNNFSTQQRIDSNNRLNRTQQINRNNTRTNTPSSCPGANSACQN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASV9</accession>
    <name>A0A0M7ASV9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">26 kDa periplasmic immunogenic protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04968</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000037">
        <property type="protein sequence ID" value="CTQ77591.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674105.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000037.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04968"/>
    <dbReference type="EnsemblBacteria" id="CTQ77591">
        <property type="protein sequence ID" value="CTQ77591"/>
        <property type="gene ID" value="LAX5112_04968"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007497">
        <property type="entry name" value="DUF541"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04402">
        <property type="entry name" value="SIMPL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809924" evidence="1">
        <location>
            <begin position="38"/>
            <end position="254"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77591.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="254" mass="26891" checksum="8EE8C57D1DC7C0B8" modified="2015-12-09" version="1">MQQFIQSSIGKLPKISRNAFFAAAFTVASLAATPAYADENAALTGTITMDGRGTVSVAPDMAVITARVVTISKTAADALAGNTSDLAKVIQQIKAAGIEAKDIQTSGFAIYPRYERVTDNSNRQPNITGYEVRNGVEINVRDLTKLGDLLTGVVDSGANSVDGIRFQVSDPDEKLDEARKRAVQEAKHKASIFAEAAGVELGGIVSISETGIQMPRPVMMRAEGMMMAKADAVPIEAGEETISASVTIQWQIAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AVJ2</accession>
    <name>A0A0M7AVJ2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Monomeric sarcosine oxidase</fullName>
            <ecNumber evidence="3">1.5.3.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">soxA</name>
        <name evidence="3" type="ORF">LAX5112_04975</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <dbReference type="EC" id="1.5.3.1" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000037">
        <property type="protein sequence ID" value="CTQ77604.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674111.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000037.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04975"/>
    <dbReference type="EnsemblBacteria" id="CTQ77604">
        <property type="protein sequence ID" value="CTQ77604"/>
        <property type="gene ID" value="LAX5112_04975"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008115">
        <property type="term" value="F:sarcosine oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006076">
        <property type="entry name" value="FAD-dep_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045170">
        <property type="entry name" value="MTOX"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10961">
        <property type="entry name" value="PTHR10961"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01266">
        <property type="entry name" value="DAO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DAO" evidence="2">
        <location>
            <begin position="3"/>
            <end position="347"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01266"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ77604.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="365" mass="39379" checksum="CDFE19E6AD6F9808" modified="2015-12-09" version="1">MSVIIVGAGVSGLSTAWALTKRSVSVTLIEQGPIPNPLSASGDQHRIIRRAYGGHGGYQRRIGDAYAAWDEMWADIGQKHLVETGFLLLSQIEGDGGDEYRTGLIDGGYPFDDMSAKETAARFPFIDADTIRWGAHSDEGGVLLCQKIASDLRDWLLEKGTDIRENTRVVSVDAEAGSVSLADGSVLHADHVIVTAGAWTLGLFPKFKTSLTTYRTAVVYLTPPEDLKAAWAAGPAILDPGGTIDGYVLPPVPGTGLKFGAGIHKYTAEPDQDRFAKAGEGETLRDYFSPPFGRIKEYNVDDVVTCAYTFTSDEHFFCTTEGKVTVVSACSGHGYKFGAVVGQKLADGFQSKDMDMARIWLEARD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPR9</accession>
    <name>A0A0M6ZPR9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative esterase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00268</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64357.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670250.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00268"/>
    <dbReference type="EnsemblBacteria" id="CTQ64357">
        <property type="protein sequence ID" value="CTQ64357"/>
        <property type="gene ID" value="LAX5112_00268"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008236">
        <property type="term" value="F:serine-type peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001375">
        <property type="entry name" value="Peptidase_S9"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00326">
        <property type="entry name" value="Peptidase_S9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidase_S9" evidence="1">
        <location>
            <begin position="88"/>
            <end position="222"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00326"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64357.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="253" mass="26670" checksum="E06B8B5C53EE3FCE" modified="2015-12-09" version="1">MTTINHHIIDRGDGAAVELFQAHPIGSGEPAGAILFVHGNQGGQLTGARELVNRGTLNRFAVAMNVTAAAVSQPGFGASDGPCDFCGPNTQDAIIAALNALKNQPSIDPGRIVLYGHSRGAVAAGMVAARYDGLRAVILSSGVYDLNAFHMDCADGLRIAIETEAGQSAQAFHARSALFHADKITTETLLLHGRHDDRVLVEQAEAFSVALENSGGKVALEVLECGHRLPAKTLKDVVEPFLKEVLSAKHLMH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQZ7</accession>
    <name>A0A0M6ZQZ7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00359</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64672.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008193842.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00359"/>
    <dbReference type="EnsemblBacteria" id="CTQ64672">
        <property type="protein sequence ID" value="CTQ64672"/>
        <property type="gene ID" value="LAX5112_00359"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ64672.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="126" mass="14432" checksum="A46D929BF79EBAAD" modified="2015-12-09" version="1">MSDFPALKKIRLNLARTKEFPQGSARHGYEFTAPLDETGHIDAGLWKKERDHCRVRRFWGDEVEEIGHLIHRPGGSWAFHYDIDGDDDDEAGYRFGTHAFTPGEYVSIKDEDGDLHTFQVVTVQSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRW5</accession>
    <name>A0A0M6ZRW5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Putative HTH-type transcriptional regulator YbbH</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">ybbH_2</name>
        <name evidence="4" type="ORF">LAX5112_00653</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65495.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00653"/>
    <dbReference type="EnsemblBacteria" id="CTQ65495">
        <property type="protein sequence ID" value="CTQ65495"/>
        <property type="gene ID" value="LAX5112_00653"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0097367">
        <property type="term" value="F:carbohydrate derivative binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901135">
        <property type="term" value="P:carbohydrate derivative metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd05013">
        <property type="entry name" value="SIS_RpiR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000281">
        <property type="entry name" value="HTH_RpiR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035472">
        <property type="entry name" value="RpiR-like_SIS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001347">
        <property type="entry name" value="SIS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046348">
        <property type="entry name" value="SIS_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01418">
        <property type="entry name" value="HTH_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01380">
        <property type="entry name" value="SIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53697">
        <property type="entry name" value="SSF53697"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51071">
        <property type="entry name" value="HTH_RPIR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51464">
        <property type="entry name" value="SIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH rpiR-type" evidence="2">
        <location>
            <begin position="32"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="domain" description="SIS" evidence="3">
        <location>
            <begin position="153"/>
            <end position="293"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51071"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ65495.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="320" mass="34146" checksum="1759EACB39898EE9" modified="2015-12-09" version="1">MSNDPEVTLETETPDAPDAPMRPPQKGGPGVFDVLSALNNLDGNFAAQEQRVATYVKNHLDAISNMTIGDLANHCKVSKPTVIRFCRSLGCSGFRDFKLRLVQNLAVSAQYMSANSIPDVPDTNTAIDQVIGALYASVDTLRKQVDADMLDATKDVILNTRQILFAGIGGGSSMITQEAANRFFRLGIPSFHVSDSYLLQMRAATLGPGDTLFLVSASGEADAIVGAAEIANGYGATTICITKPNTRLAAAAKIQILIDVPEDRAIFKPTASRYVHLVVIDALATAVAQEAADTTKENLRRIRASLTAYHGRTGPQPLGD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSF3</accession>
    <name>A0A0M6ZSF3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Type IV pilus biogenesis and competence protein PilQ</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">pilQ</name>
        <name evidence="4" type="ORF">LAX5112_00541</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the bacterial secretin family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65192.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00541"/>
    <dbReference type="EnsemblBacteria" id="CTQ65192">
        <property type="protein sequence ID" value="CTQ65192"/>
        <property type="gene ID" value="LAX5112_00541"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009306">
        <property type="term" value="P:protein secretion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007055">
        <property type="entry name" value="BON_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001775">
        <property type="entry name" value="GspD/PilQ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032789">
        <property type="entry name" value="T2SS-T3SS_pil_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004846">
        <property type="entry name" value="T2SS/T3SS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04972">
        <property type="entry name" value="BON"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00263">
        <property type="entry name" value="Secretin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13629">
        <property type="entry name" value="T2SS-T3SS_pil_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00811">
        <property type="entry name" value="BCTERIALGSPD"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50914">
        <property type="entry name" value="BON"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="21"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="domain" description="BON" evidence="3">
        <location>
            <begin position="125"/>
            <end position="197"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU004003"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50914"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ65192.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="483" mass="51496" checksum="F2DE21CE40D70B65" modified="2015-12-09" version="1">MKNNTEHSVHVDRKSIRRSGLRFCAFAAVMGFVSFMAPASWSQEAFPSQIHVAAGERATDRILNVGIGRSVVINLAEDAADVLVSNPQIADAVLRTPRRIFVLGNTAGQARLVLFGRSGRELASFDIRVEKDTSDITRIIRRLIPGTSVQAESINGKVVLSGTAKSTLEAQQAADIAAKFQGDETGSAIVNLIAVSGSDQVHLKVTVAEVERSIIKQLGVSFQANLGAGNFFPFGSNFPNFNVNPSIVNQATGGVTFSSGTSSLTAQVEALQRDGVIRTLAEPTLTATSGENASFLAGGEFPIPIAQEDNQISVEFKKFGVGLDFTPIVLTGGRISLRVKTEVSELSNEGAVSAGGITISALKVRRAESTMELPSGGTLVMAGLLEESYQQAVEGVPGLMQIPVLGALFKSRDFLKQQTELAVFVTPYVVKPVAAQKMVRPDKNLFAPSDAEAIFLNRLNKIFNPAGEQAQGTYHGQVGFIYK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSY9</accession>
    <name>A0A0M6ZSY9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Phosphate acetyltransferase</fullName>
            <ecNumber evidence="3">2.3.1.8</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">pta</name>
        <name evidence="3" type="ORF">LAX5112_00548</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.3.1.8" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65210.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670486.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00548"/>
    <dbReference type="EnsemblBacteria" id="CTQ65210">
        <property type="protein sequence ID" value="CTQ65210"/>
        <property type="gene ID" value="LAX5112_00548"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008959">
        <property type="term" value="F:phosphate acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029069">
        <property type="entry name" value="HotDog_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002539">
        <property type="entry name" value="MaoC-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002505">
        <property type="entry name" value="PTA_PTB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01575">
        <property type="entry name" value="MaoC_dehydratas"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01515">
        <property type="entry name" value="PTA_PTB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54637">
        <property type="entry name" value="SSF54637"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="MaoC-like" evidence="2">
        <location>
            <begin position="20"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="domain" description="PTA_PTB" evidence="1">
        <location>
            <begin position="237"/>
            <end position="447"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01515"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01575"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ65210.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="470" mass="50328" checksum="C70635DC093851EE" modified="2015-12-09" version="1">MATNKTYDQIKVGDTAEIVRECSSNDLLVFAHASGNRNPIHLPDTDWTGDGQIDKPVAPAMWIGGLASAVLGNILPGPGTMYKAQSFRFLGRAAVGDKLTVRVTVTEKKPNNIIMFDMTVLNETGQSLVEGEAEVIAPTETIEFDSSDIPALLVQRHRHFNRMIELAKTLPALPTAVVAPDDPNSLEGALMAAREGLIEPILIGAKDRVIKAAEELNETLDGYEFIDIEDESEAAGRAVQMVHESRVKAIMKGHLHTDHLLHHVVKKDGGLRTKRRISHVFVMDIPGRKTPVLISDAAINISPDLNTKVDITQNAIDAALSLGLQSPRVGILSAIETVNPAIPSSLDAAVLSKMAERGQIKGGIVDGPLAMDNAIDVQAARTKGITSLVAGHAEVLIVPNLESGNMLAKELTFIAHAEAAGLVIGAKVPVMLTSRADDGRARLASCALALLFTHWKENSAPAGIFDREED</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="31" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTL6</accession>
    <name>A0A0M6ZTL6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Transcriptional regulatory protein tctD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">tctD_1</name>
        <name evidence="5" type="ORF">LAX5112_00858</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66068.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670759.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00858"/>
    <dbReference type="EnsemblBacteria" id="CTQ66068">
        <property type="protein sequence ID" value="CTQ66068"/>
        <property type="gene ID" value="LAX5112_00858"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00383">
        <property type="entry name" value="trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001867">
        <property type="entry name" value="OmpR/PhoB-type_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039420">
        <property type="entry name" value="WalR-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48111">
        <property type="entry name" value="PTHR48111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00486">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00862">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51755">
        <property type="entry name" value="OMPR_PHOB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="1" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="3">
        <location>
            <begin position="2"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="domain" description="OmpR/PhoB-type" evidence="4">
        <location>
            <begin position="124"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="OmpR/PhoB-type" evidence="2">
        <location>
            <begin position="124"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="1">
        <location>
            <position position="51"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ66068.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="223" mass="25402" checksum="CB9BA6BFE94CEBC8" modified="2015-12-09" version="1">MRLLLVEDTFDMAEAIMIRLDRSGIACDLAKTLEEARSLLDVQRYDVIVLDLNLPDGLGTDLLKELRLKSDRTPVLVLTAEFSVDDRVSTLNSGADDYLVKPFDHRELEARIQALYRREQGDKAEELAIGDLTFNATARVVRLKEVPVNLTRREFSLLELFIRNRGKVLSKERLFEGIFSFQDTDVSMNALELYVARLRKKLSGSSVVIETQRGLGYKLEVHD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTQ9</accession>
    <name>A0A0M6ZTQ9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Crotonyl-CoA reductase</fullName>
            <ecNumber evidence="2">1.3.1.86</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ccr</name>
        <name evidence="2" type="ORF">LAX5112_00640</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.3.1.86" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65470.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670595.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00640"/>
    <dbReference type="EnsemblBacteria" id="CTQ65470">
        <property type="protein sequence ID" value="CTQ65470"/>
        <property type="gene ID" value="LAX5112_00640"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013149">
        <property type="entry name" value="ADH-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013154">
        <property type="entry name" value="ADH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011032">
        <property type="entry name" value="GroES-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020843">
        <property type="entry name" value="PKS_ER"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08240">
        <property type="entry name" value="ADH_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00107">
        <property type="entry name" value="ADH_zinc_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00829">
        <property type="entry name" value="PKS_ER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50129">
        <property type="entry name" value="SSF50129"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PKS_ER" evidence="1">
        <location>
            <begin position="16"/>
            <end position="362"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65470.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="364" mass="38556" checksum="4152D0C3767E8922" modified="2015-12-09" version="1">MSIPATMKAMVLEGHGGLDKIVWHEDWPTPEPGDGEVLIKVGACGLNNTDVNTRSGWYSKTVSEATTGGVYQEVAEEDPTWGGRPITFPRIQGADTVGTVVALGEGVSEGLLNKRVMVDCWLRDWSDPDNMDKTGYFGSECNGGFAEYTVVDARNVGTIDSELSDAELATFSCSYTTAEGMLSRANVGAEDTVLVTGASGGVGSALVQLAKRRGATVIALASPAKHPEVKALCADHVLDRAPADLKAALKSATGKDMVSVVADIVGGAYWGTLIDVLKRGGRYTCSGAIAGPIVELDLRTFYLRDLTFTGSTVIATHIFPDVVGYIERGEIRPALAATYPLKDFHAAQTAFIEKKHTGNIVVTP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTU6</accession>
    <name>A0A0M6ZTU6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Hydrogenase maturation protease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00891</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase A31 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66158.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00891"/>
    <dbReference type="EnsemblBacteria" id="CTQ66158">
        <property type="protein sequence ID" value="CTQ66158"/>
        <property type="gene ID" value="LAX5112_00891"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008047">
        <property type="term" value="F:enzyme activator activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008233">
        <property type="term" value="F:peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1450">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023430">
        <property type="entry name" value="Pept_HybD-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000671">
        <property type="entry name" value="Peptidase_A31"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30302">
        <property type="entry name" value="PTHR30302"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53163">
        <property type="entry name" value="SSF53163"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00072">
        <property type="entry name" value="hydrog_prot"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0645">Protease</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006814"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66158.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="146" mass="15383" checksum="14D3B57AD048C2A8" modified="2015-12-09" version="1">MLLIGYGNPGRGDDGLGPAFSDSMAARDLTSWTIDTDYQLVAEHAFDVSGHELVVFADAEIGSAEPFSFREIKPGAPEVLGSHSLVPETVLSLCETLYGVAPTAFVLGISGVEYGEVKEGLSDQAAANLTKAQVFFLDWAGKLSTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZU27</accession>
    <name>A0A0M6ZU27_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative peptidase</fullName>
            <ecNumber evidence="2">3.4.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00484</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.4.-.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65024.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670435.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00484"/>
    <dbReference type="EnsemblBacteria" id="CTQ65024">
        <property type="protein sequence ID" value="CTQ65024"/>
        <property type="gene ID" value="LAX5112_00484"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.350.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029149">
        <property type="entry name" value="Creatin/AminoP/Spt16_NTD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036005">
        <property type="entry name" value="Creatinase/aminopeptidase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000994">
        <property type="entry name" value="Pept_M24"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00557">
        <property type="entry name" value="Peptidase_M24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55920">
        <property type="entry name" value="SSF55920"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidase_M24" evidence="1">
        <location>
            <begin position="205"/>
            <end position="412"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00557"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65024.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="432" mass="48892" checksum="DF8A0EF4A61BE9E6" modified="2015-12-09" version="1">MTRALMPNMLTPQDLEPNWEWRDRLPAWGHTSVDFERRVDHDRLRRYRLARTRQSLQNSPAGSLLLFDVNNIRYVSATKIGEWERDKMCRFCLLTGDDSPYVWDFGSAAVHHQRYSDWLEPDHCLAGVVGMRGTIPPEFGLMRKYAKMIAQLIKDAGMADMPVGVDYAETAMFHALQEEGIKVVDGQQIMLAAREIKNWDEIQLLTQAAAMVDGVYHMIYEELKPGVRENDIVALSNKLLYEMGSDDVEAINAISGERCNPHPHNFTDRLIRPGDQCFFDILQSYQGYRTCYYRTFNVGRATPAQNDAYVKAREWIDASIAMIKPGVTTDKVAEVWPTAESLGFPNEDAAFGLQFGHGLGLALHERPIISRAVSLEHPMEIKTGMVFALETYCPATDGYSAARIEEEVVVTETGCEVISLFPAEDLPIANRY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUS3</accession>
    <name>A0A0M6ZUS3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative enoyl-CoA hydratase echA8</fullName>
            <ecNumber evidence="2">4.2.1.17</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">echA8_2</name>
        <name evidence="2" type="ORF">LAX5112_01000</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the enoyl-CoA hydratase/isomerase family.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.17" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66525.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670906.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01000"/>
    <dbReference type="EnsemblBacteria" id="CTQ66525">
        <property type="protein sequence ID" value="CTQ66525"/>
        <property type="gene ID" value="LAX5112_01000"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004300">
        <property type="term" value="F:enoyl-CoA hydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.12.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029045">
        <property type="entry name" value="ClpP/crotonase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001753">
        <property type="entry name" value="Enoyl-CoA_hydra/iso"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014748">
        <property type="entry name" value="Enoyl-CoA_hydra_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00378">
        <property type="entry name" value="ECH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52096">
        <property type="entry name" value="SSF52096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005254"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66525.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="273" mass="29572" checksum="28EAB2F60C114A70" modified="2015-12-09" version="1">MTDAAANDMAEKPILATLLHEGVYRIVMQRPERMNALSSEMMGALSEELTKAAENPDVRVVLLGAEGKVFCAGHDLKELTGARAEADGGKATYERIMRQCSDLMQQIVRLPKPVIAVVTGVATAAGCQLVASCDLAIATDTATFCTPGVNIGLFCSTPMVALSRNVAPKQAMEMLLTGESIDASTAKDFGLINRIVPRDYLEQVVQKYAESIASKSAHTVKIGKEAFYRQLEMPLSEAYDFAAETMVGNMMARDAEEGINAFLQKRKPEWTDS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVD0</accession>
    <name>A0A0M6ZVD0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Sulfur oxidation protein SoxY</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_00837</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66010.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670741.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00837"/>
    <dbReference type="EnsemblBacteria" id="CTQ66010">
        <property type="protein sequence ID" value="CTQ66010"/>
        <property type="gene ID" value="LAX5112_00837"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.2470">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032711">
        <property type="entry name" value="SoxY"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038162">
        <property type="entry name" value="SoxY_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016568">
        <property type="entry name" value="Sulphur_oxidation_SoxY"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006311">
        <property type="entry name" value="TAT_signal"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13501">
        <property type="entry name" value="SoxY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF010312">
        <property type="entry name" value="Sulphur_oxidation_SoxY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR04488">
        <property type="entry name" value="SoxY_true_GGCGG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809126" evidence="1">
        <location>
            <begin position="29"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="domain" description="SoxY" evidence="2">
        <location>
            <begin position="38"/>
            <end position="147"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ66010.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="149" mass="15273" checksum="10C570952E4A4789" modified="2015-12-09" version="1">MTITRRQALAMTAGAAAFLTFAPRVSFAATPDTDAAIKEFTGGATPTEGTVSLDTPEIAENGNTVPVGVTVDSPMTSDNYVESVLILADGNPNPAVATFHFSAMSGAAEAKTRIRLAKTQNVIAVAKMSDGSTFMDTKEVKVTIGGCGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVI1</accession>
    <name>A0A0M6ZVI1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Proclavaminate amidinohydrolase</fullName>
            <ecNumber evidence="2">3.5.3.22</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">pah_1</name>
        <name evidence="2" type="ORF">LAX5112_00667</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the arginase family.</text>
    </comment>
    <dbReference type="EC" id="3.5.3.22" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65534.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670615.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00667"/>
    <dbReference type="EnsemblBacteria" id="CTQ65534">
        <property type="protein sequence ID" value="CTQ65534"/>
        <property type="gene ID" value="LAX5112_00667"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033972">
        <property type="term" value="F:proclavaminate amidinohydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006035">
        <property type="entry name" value="Ureohydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023696">
        <property type="entry name" value="Ureohydrolase_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11358">
        <property type="entry name" value="PTHR11358"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00491">
        <property type="entry name" value="Arginase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00116">
        <property type="entry name" value="ARGINASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52768">
        <property type="entry name" value="SSF52768"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51409">
        <property type="entry name" value="ARGINASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00742"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65534.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="412" mass="45030" checksum="DF0B2AB9352F6084" modified="2015-12-09" version="1">MSIFRPDGPSTRQRAAGLLERAKTERHHHPDFDKLQLRGWKAAEKEGMLPSAAWEKERAWALRMGLTGSDSLTDKSIPTFARGELPHYAGINTFLKAPYIEDVTQVGAYDAAVIGIPFDGGTTYRPGTRFGPQGVRKISALYTPYNYEMGVDLREQMTLCDVGDIFTIPANIEKTFDQITRAVSHVASSGALPIMIGGDHSIGFPCVRGIAQCTSKRIGIVHFDRHIDIQEKDLDERMHTTPWFHATDLVNVPAVNLVQIGIGGWQVPREGVEVARERNTNIFTMRDVEELGLAETAARALELAWKDADAVYISFDIDSVDCGFVPGTGWPEPGGFLPREALELVSLVAKEGICGLEVVEVSPPYDCSDITALLATRVIVDVLGTLVSHGKMGSHKSIIDKPVSIPAGPDVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZW29</accession>
    <name>A0A0M6ZW29_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Bacterial extracellular solute-binding proteins, family 3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_00976</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66461.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00976"/>
    <dbReference type="EnsemblBacteria" id="CTQ66461">
        <property type="protein sequence ID" value="CTQ66461"/>
        <property type="gene ID" value="LAX5112_00976"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809146" evidence="2">
        <location>
            <begin position="46"/>
            <end position="284"/>
        </location>
    </feature>
    <feature type="domain" description="PBPb" evidence="3">
        <location>
            <begin position="56"/>
            <end position="277"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00497"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ66461.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="284" mass="31970" checksum="E1BF4A557A5CD2AC" modified="2015-12-09" version="1">MVRNSGYMCPNCNTPFRSWTWIFRLPGVLLTAFLMLAGGQGSAQAAERCDTIRVNGTVDWYPVIMRSSDTGLASGVLPATMVELGRRVGIDVIFQPITPFKRQLVQLENGSLDAVLGAYWTKERAEKFQYSSSVLDDEVAIFVLKGKEFPLSKRSDLVGRLGIRPFGGSYGEDFDQYAREHLAMQEIAPVPTDFRRDMLAMLLNENADYAVLGRFHGLKIIEEGEGADQLIDLEWPVVSNGVHILFSRKSPCAHLFDRFEEQLKKLWAEGWIESVLADYRRPGQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWD3</accession>
    <name>A0A0M6ZWD3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Glycerophosphoryl diester phosphodiesterase</fullName>
            <ecNumber evidence="3">3.1.4.46</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">glpQ</name>
        <name evidence="3" type="ORF">LAX5112_01022</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.4.46" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66587.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670916.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01022"/>
    <dbReference type="EnsemblBacteria" id="CTQ66587">
        <property type="protein sequence ID" value="CTQ66587"/>
        <property type="gene ID" value="LAX5112_01022"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008889">
        <property type="term" value="F:glycerophosphodiester phosphodiesterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006629">
        <property type="term" value="P:lipid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.190">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030395">
        <property type="entry name" value="GP_PDE_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017946">
        <property type="entry name" value="PLC-like_Pdiesterase_TIM-brl"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03009">
        <property type="entry name" value="GDPD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51695">
        <property type="entry name" value="SSF51695"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51704">
        <property type="entry name" value="GP_PDE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809014" evidence="1">
        <location>
            <begin position="22"/>
            <end position="399"/>
        </location>
    </feature>
    <feature type="domain" description="GP-PDE" evidence="2">
        <location>
            <begin position="58"/>
            <end position="393"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51704"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ66587.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="399" mass="43253" checksum="C1EF8C46AA88C5DD" modified="2015-12-09" version="1">MRFTKAASIAALAMLSTPAIADTIELGPRPYYLIDQMAEGPLKEKLEACIGLPLKKTDFSIGHRGAPLQFPEHTVESYKAAALMGAGIMECDVTFTKDKELVCRHAQNDLHTTTDILATDLAGKCTKGFSPADGSTKASAECRTSDLTLAEFKTLNGKMDAADRSATTVEAYMDGTAGWRTDLYATKGTLMTHAESIALFKDLGVKFTPELKSPSVDMPFDGFSQEDYAQKLIDEYKAAGIPASDVFPQSFNLDDVLYWIENEPDFGKQAVYLDGRRDLNPSDPSTFSPSMDELKAKGVNYIAPPLWVLVTLDEGEITASAYARAANEAGLNLITWTLERSGPLTTGGGWYFQTVKDAIDGDGRVYEVVDVLAKDAGVVGLFSDWPATTTFYASCMGLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWN0</accession>
    <name>A0A0M6ZWN0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF6362 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01245</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67168.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671081.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67168">
        <property type="protein sequence ID" value="CTQ67168"/>
        <property type="gene ID" value="LAX5112_01245"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045942">
        <property type="entry name" value="DUF6362"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19889">
        <property type="entry name" value="DUF6362"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF6362" evidence="1">
        <location>
            <begin position="61"/>
            <end position="137"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF19889"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67168.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="176" mass="19803" checksum="054F4AAD486F2745" modified="2015-12-09" version="1">MTLAELESLILDRLLEAQVCMKALRVTGVRPGLPSTFWPETETNESERWHVVKDQIISGIKTDDPLKPRRAPPPAAAISRMEETWGWLAGIRNENSRKAVAIKVFAWVHKESTSTLARNMGINRVTLNRRYNAGMEELMARFCKTSVLPDPADEDLVHHFRPNQAMSNRNIAASAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXX8</accession>
    <name>A0A0M6ZXX8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Zinc-finger domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01464</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67645.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671446.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01464"/>
    <dbReference type="EnsemblBacteria" id="CTQ67645">
        <property type="protein sequence ID" value="CTQ67645"/>
        <property type="gene ID" value="LAX5112_01464"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019401">
        <property type="entry name" value="Znf_CHCC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10276">
        <property type="entry name" value="zf-CHCC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0862">Zinc</keyword>
    <keyword evidence="2" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="zf-CHCC" evidence="1">
        <location>
            <begin position="23"/>
            <end position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF10276"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67645.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="81" mass="8831" checksum="F74467A525587BFD" modified="2015-12-09" version="1">MADQVVPHFQNTSGHDSIAIGAKEFMCIGAHPPFDHPHVFLDMGSEKEVVCPYCSTLYKYDATLASNESSPSDCTWVPEAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYL0</accession>
    <name>A0A0M6ZYL0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative enzyme related to lactoylglutathione lyase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01375</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67407.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671179.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01375"/>
    <dbReference type="EnsemblBacteria" id="CTQ67407">
        <property type="protein sequence ID" value="CTQ67407"/>
        <property type="gene ID" value="LAX5112_01375"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.180.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029068">
        <property type="entry name" value="Glyas_Bleomycin-R_OHBP_Dase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004360">
        <property type="entry name" value="Glyas_Fos-R_dOase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037523">
        <property type="entry name" value="VOC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00903">
        <property type="entry name" value="Glyoxalase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54593">
        <property type="entry name" value="SSF54593"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51819">
        <property type="entry name" value="VOC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="VOC" evidence="1">
        <location>
            <begin position="7"/>
            <end position="124"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51819"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67407.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="126" mass="13662" checksum="E1AF356477570E3C" modified="2015-12-09" version="1">MTFKPQHFNVWMEIPVSDLDKAIVFYNNVFQTELNLVTDMGPNPFAMFPTSEENGVAGHLYPGTPAEKGTGPTIHIACPDTLEETMERFAKAGGEVISDPIPIPAGRFAYGIDPDGNSIGMFAVNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYP4</accession>
    <name>A0A0M6ZYP4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Murein L,D-transpeptidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">LAX5112_01045</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Cell wall biogenesis; peptidoglycan biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the YkuD family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66653.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008193457.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01045"/>
    <dbReference type="EnsemblBacteria" id="CTQ66653">
        <property type="protein sequence ID" value="CTQ66653"/>
        <property type="gene ID" value="LAX5112_01045"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00219"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071972">
        <property type="term" value="F:peptidoglycan L,D-transpeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd16913">
        <property type="entry name" value="YkuD_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.101.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.440.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005490">
        <property type="entry name" value="LD_TPept_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002477">
        <property type="entry name" value="Peptidoglycan-bd-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036365">
        <property type="entry name" value="PGBD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036366">
        <property type="entry name" value="PGBDSf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038063">
        <property type="entry name" value="Transpep_catalytic_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01471">
        <property type="entry name" value="PG_binding_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03734">
        <property type="entry name" value="YkuD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141523">
        <property type="entry name" value="SSF141523"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47090">
        <property type="entry name" value="SSF47090"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PG_binding_1" evidence="4">
        <location>
            <begin position="91"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="domain" description="YkuD" evidence="5">
        <location>
            <begin position="175"/>
            <end position="343"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004752"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF01471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF03734"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ66653.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="408" mass="46229" checksum="5DE25C8AD55C61EB" modified="2015-12-09" version="1">MLLGLAAPVVVTGAASAQQSFRTAGQDLEWADSFDIATDNITEVKSYAPTLSPTTVDYIGAAITRYQSIVQMGGWGTVSTGGKALRIGMKDPRVVQVRQRLIISGDLEQQAGLSDTFDSYVDAALRRFQLRHGLIPDGVMGESTVEALNIPAYVRLRQLETNLVRVRSMSGNLGDRYVMVNIPAAEIEAVEDGRVRSRHTAVVGKIDRQTPILNSKIYELNFNPYWTVPVSIIRKDLIPKMKEDPEYLSRNKIRIFNWRDNQEVAWQQIDWNTDEATQYRFTQDPGQENSLGSVRINFHNKHQVYLHDTPSKTLFGEDYRFHSSGCVRVQNVRELVTWLLQSTTPDWDRTKVDSVIRTGEREDVKLKRSIPLYMTYVTAWANADGVVHFREDIYNRDDLSGTGEQARL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYR0</accession>
    <name>A0A0M6ZYR0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">L-methionine gamma-lyase</fullName>
            <ecNumber evidence="4">4.4.1.11</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">mdeA_2</name>
        <name evidence="8" type="ORF">LAX5112_01581</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>H2O + L-methionine = 2-oxobutanoate + methanethiol + NH4(+)</text>
            <dbReference type="Rhea" id="RHEA:23800"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16007"/>
            <dbReference type="ChEBI" id="CHEBI:16763"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="ChEBI" id="CHEBI:57844"/>
            <dbReference type="EC" id="4.4.1.11"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 7">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the trans-sulfuration enzymes family. L-methionine gamma-lyase subfamily.</text>
    </comment>
    <dbReference type="EC" id="4.4.1.11" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67948.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671367.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01581"/>
    <dbReference type="EnsemblBacteria" id="CTQ67948">
        <property type="protein sequence ID" value="CTQ67948"/>
        <property type="gene ID" value="LAX5112_01581"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018826">
        <property type="term" value="F:methionine gamma-lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019346">
        <property type="term" value="P:transsulfuration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00614">
        <property type="entry name" value="CGS_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000277">
        <property type="entry name" value="Cys/Met-Metab_PyrdxlP-dep_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006237">
        <property type="entry name" value="L-Met_gamma_lys"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11808">
        <property type="entry name" value="PTHR11808"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01053">
        <property type="entry name" value="Cys_Met_Meta_PP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001434">
        <property type="entry name" value="CGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01328">
        <property type="entry name" value="met_gam_lyase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00868">
        <property type="entry name" value="CYS_MET_METAB_PP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0456">Lyase</keyword>
    <keyword evidence="6 7" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="modified residue" description="N6-(pyridoxal phosphate)lysine" evidence="6">
        <location>
            <position position="209"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000271"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008667"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012222"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00019040"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR001434-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU362118"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ67948.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="401" mass="42838" checksum="BC353725E780C4CC" modified="2015-12-09" version="1">MTDHLKGFATRAIHHAYDPLQNEGALTPPLHLTSTFAFESAEAGGEMFSGERAGHIYSRISNPTLDLLERRIALLEGAEAGLALSSGMGAITAALWTLLSPGDEIIVDKTLYGCTFAYMHHGLSKFGITVTHVDLTEPDNLVPAISGKTRVVYFETPANPNMRLVDIAAVSKIAHQAGATVVVDNTYATPYLTRPIELGADLVLHSATKYLGGHGDVVAGLIAGRAEQVQEIRLVGMKDMTGAVMAPFNAMLILRGLKTLALRMDRHCASAQPVAEWLEAHPAVGEVYFPGLTSFAQHDLAKRQMAKPGAMIAFELKGGLDAGRDMMNRLQMIGRAVSLGDAETLIQHPATMTHSTYTPEERAAHGITDGLIRLSVGLEDLDDILEDLAQALSGVPASMAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZN7</accession>
    <name>A0A0M6ZZN7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF6456 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01513</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67771.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671320.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01513"/>
    <dbReference type="EnsemblBacteria" id="CTQ67771">
        <property type="protein sequence ID" value="CTQ67771"/>
        <property type="gene ID" value="LAX5112_01513"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045599">
        <property type="entry name" value="DUF6456"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20057">
        <property type="entry name" value="DUF6456"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF6456" evidence="1">
        <location>
            <begin position="122"/>
            <end position="256"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF20057"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67771.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="275" mass="30061" checksum="0EE196DAA51C4E06" modified="2015-12-09" version="1">MTFLSDNSADRRARVRLLHSLSSKGSEVVQECSSGQSTWVLVRDFKTRSTCWSDQLIEAALSAGVLKRVGQSTCRISPEGRAALRRALSGSEDIAVQHREIRSVPCDGENANETGKRPATAKVNLSESPLARLAARKKKNGQPLLKPEEVRAGERLRADFTFASMMPTVGQGWRTERVSVSARGSGLKDLNDDVLSARQRVETVLQSLEPVLAGVLVDVCCHLKGLEKVEAERGWPARCAKIILQIALSALADRYGERTQAPSRSSRVRSWSSAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A094</accession>
    <name>A0A0M7A094_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">UDP-glucose 4-epimerase</fullName>
            <ecNumber evidence="3">5.1.3.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">galE_1</name>
        <name evidence="3" type="ORF">LAX5112_01561</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the NAD(P)-dependent epimerase/dehydratase family.</text>
    </comment>
    <dbReference type="EC" id="5.1.3.2" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67896.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671353.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01561"/>
    <dbReference type="EnsemblBacteria" id="CTQ67896">
        <property type="protein sequence ID" value="CTQ67896"/>
        <property type="gene ID" value="LAX5112_01561"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003978">
        <property type="term" value="F:UDP-glucose 4-epimerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001509">
        <property type="entry name" value="Epimerase_deHydtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01370">
        <property type="entry name" value="Epimerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0413">Isomerase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Epimerase" evidence="2">
        <location>
            <begin position="5"/>
            <end position="217"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007637"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ67896.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="324" mass="35759" checksum="4D974F02CD590031" modified="2015-12-09" version="1">MSRAVVFGGAGFIGSHLLLSLKESGKFEELVSVDLVAPRVPVETVDYKIADIRRPLPVDLCQVPDVIFNLAAVHRTPGHETHEYYETNVAGATHICEFARALSVKKIVFTSSIAVYGPDEAPKEETTPTAPQSAYGWSKLLAEQIQQSWQQEAPDRKLVISRPAVVFGAGENGNFTRLAGALKKGFFLYPGRKDTIKACGYVDELIRSFDFMLGQEEGQSLYNFCYPYPYTIEEICQSFERAGGLSQPRGVVPLPLMKLASLPFEILNAFGIRNGINRARIQKLVVSTNIVPAKLKSSGYVFETNLDTALKNWRATSLTDDGFT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0V3</accession>
    <name>A0A0M7A0V3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Proclavaminate amidinohydrolase</fullName>
            <ecNumber evidence="5">3.5.3.22</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">pah_3</name>
        <name evidence="5" type="ORF">LAX5112_01812</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the arginase family. Agmatinase subfamily.</text>
    </comment>
    <dbReference type="EC" id="3.5.3.22" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68625.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01812"/>
    <dbReference type="EnsemblBacteria" id="CTQ68625">
        <property type="protein sequence ID" value="CTQ68625"/>
        <property type="gene ID" value="LAX5112_01812"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033972">
        <property type="term" value="F:proclavaminate amidinohydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901564">
        <property type="term" value="P:organonitrogen compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005925">
        <property type="entry name" value="Agmatinase-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006035">
        <property type="entry name" value="Ureohydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023696">
        <property type="entry name" value="Ureohydrolase_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020855">
        <property type="entry name" value="Ureohydrolase_Mn_BS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11358">
        <property type="entry name" value="PTHR11358"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00491">
        <property type="entry name" value="Arginase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF036979">
        <property type="entry name" value="Arginase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00116">
        <property type="entry name" value="ARGINASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52768">
        <property type="entry name" value="SSF52768"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01230">
        <property type="entry name" value="agmatinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01053">
        <property type="entry name" value="ARGINASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51409">
        <property type="entry name" value="ARGINASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009227"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003684"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ68625.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="364" mass="39594" checksum="1CA404F975B007D5" modified="2015-12-09" version="1">MGRRGRPRTGQIRSHLTGSSLFMFNQTSFAPAASLWELFMSDPFFQPVSGFDLPRFAGVPTFMRLPHVELDNPRLPEVQIGLIGAPWDGGTTNRPGPRHGPRQLRDASTMIRAQNGDTGVRPFELVNCADLGDVGPNPASVEDSLHRMTTYYDEVLDAGVVPLTAGGDHLCSLPILRAIANKHGPVGMIHFDSHTDLFKSYFGGMQYTHGTPFRRAVEEELLDPKRVVQIGIRGTAYDFEDRDFAESVGIRVFAIEEYFARGVQDVLAEAKEIAGQGATYVSYDIDFVDPAFAPGTGTPEVGGPNSFEALQVARMLDGVNIVGADLVEVSPPFDQSGGTAFLGVSIMFELLCNMALNLKGAEQE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1D7</accession>
    <name>A0A0M7A1D7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01627</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68080.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ68080">
        <property type="protein sequence ID" value="CTQ68080"/>
        <property type="gene ID" value="LAX5112_01627"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="167"/>
            <end position="186"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="233"/>
            <end position="253"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="289"/>
            <end position="310"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68080.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="406" mass="45735" checksum="BF95730B4129DD4B" modified="2015-12-09" version="1">MKFLNNLLSNKMIRLAVSSIVILFGFSGIVSIYSFSKLGKNEQESRIYASTDYKNLNTSLDLLMSELGRLQTIRSTDINNQEHNEIKNELKNLQVETVNRIIGDLNPIKIEKDENLNKINFIALHSVSPQTGVNAIAEVSFSHSVRAEDNDTSTNISLGSISYDYEIPILSAGASIFIAFLLYFYYPGSKIIQNESNLPNPYNFDKSATEKIISIEIYKLEVTAKETYNRATILLVGGIIMAFVGIVVFYTTANPTNLEIPSSNNFLLPKDFEGAASNKNLQIDIKTHLIANIRPIGMLIFIEAIAWFLLRQYRISVEDYKIISRIYRGRVNTLLSLKILRESKSKNADTIIAAALTKEDISERLNKNQTTEALEAMKIAEPNPVFELFNKILPTSPRRTDTKESQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1F6</accession>
    <name>A0A0M7A1F6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 5">50S ribosomal protein L3</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 7" type="primary">rplC</name>
        <name evidence="7" type="ORF">LAX5112_01726</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Part of the 50S ribosomal subunit. Forms a cluster with proteins L14 and L19.</text>
    </comment>
    <comment type="PTM">
        <text evidence="5">Methylated by PrmB.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the universal ribosomal protein uL3 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68401.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671479.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01726"/>
    <dbReference type="EnsemblBacteria" id="CTQ68401">
        <property type="protein sequence ID" value="CTQ68401"/>
        <property type="gene ID" value="LAX5112_01726"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01325_B">
        <property type="entry name" value="Ribosomal_L3_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000597">
        <property type="entry name" value="Ribosomal_L3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019927">
        <property type="entry name" value="Ribosomal_L3_bac/org-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009000">
        <property type="entry name" value="Transl_B-barrel_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11229">
        <property type="entry name" value="PTHR11229"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00297">
        <property type="entry name" value="Ribosomal_L3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50447">
        <property type="entry name" value="SSF50447"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03625">
        <property type="entry name" value="L3_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0488">Methylation</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3 5 7" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="5" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="5" id="KW-0699">rRNA-binding</keyword>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="133"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="133"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="modified residue" description="N5-methylglutamine" evidence="5">
        <location>
            <position position="151"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006540"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00019301"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01325"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ68401.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="236" mass="25180" checksum="62618A0A602F3B7B" modified="2015-12-09" version="1">MRSGVIAQKVGMTRIYNDAGEHVPVTVLRLENCQVVAHRTDEKNGYNALQLGAGTRKVKNTPKALRGHFAVAKVEPKRTVVEFRVSADNMIDVGAEITADHYVEGQFVDVTGTSIGKGFAGVMKRHNFGGGRASHGNSISHRSHGSTGQCQDPGRVFKGKKMAGHMGDARVTTQNLKVVRTDVERGLIMVEGSVPGAKGGWIQVRDAIKKALPENVPVPGAFKASEAAEAAGKESE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1M1</accession>
    <name>A0A0M7A1M1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 9">Flagellar biosynthetic protein FliQ</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">fliQ_1</name>
        <name evidence="9" type="synonym">fliQ</name>
        <name evidence="10" type="ORF">LAX5112_01665</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Role in flagellar biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cell membrane</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="9">Bacterial flagellum basal body</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the FliQ/MopD/SpaQ family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68180.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671429.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01665"/>
    <dbReference type="EnsemblBacteria" id="CTQ68180">
        <property type="protein sequence ID" value="CTQ68180"/>
        <property type="gene ID" value="LAX5112_01665"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009425">
        <property type="term" value="C:bacterial-type flagellum basal body"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044780">
        <property type="term" value="P:bacterial-type flagellum assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009306">
        <property type="term" value="P:protein secretion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002191">
        <property type="entry name" value="Bac_export_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006305">
        <property type="entry name" value="FliQ"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34040">
        <property type="entry name" value="PTHR34040"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01313">
        <property type="entry name" value="Bac_export_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004669">
        <property type="entry name" value="FliQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00952">
        <property type="entry name" value="TYPE3IMQPROT"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01402">
        <property type="entry name" value="fliQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 9" id="KW-0975">Bacterial flagellum</keyword>
    <keyword evidence="4 9" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="10" id="KW-0966">Cell projection</keyword>
    <keyword evidence="10" id="KW-0969">Cilium</keyword>
    <keyword evidence="10" id="KW-0282">Flagellum</keyword>
    <keyword evidence="7 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 9" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="12"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="50"/>
            <end position="69"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006156"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00021718"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023143"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU364090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ68180.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="90" mass="9749" checksum="1CA30E803C4D1A54" modified="2015-12-09" version="1">MTGPEVLDLARYAVWAMILIAGPTMVIGLLVGVIIALFQALTQIQEMTLVFVPKILAIFVTLLLSLPFMSQVLEGFMAEIAEMILATSPV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1S7</accession>
    <name>A0A0M7A1S7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="13">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">mcpB_1</name>
        <name evidence="13" type="ORF">LAX5112_01782</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the methyl-accepting chemotaxis (MCP) protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68551.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671508.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ68551">
        <property type="protein sequence ID" value="CTQ68551"/>
        <property type="gene ID" value="LAX5112_01782"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033479">
        <property type="entry name" value="dCache_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004089">
        <property type="entry name" value="MCPsignal_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029151">
        <property type="entry name" value="Sensor-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000727">
        <property type="entry name" value="T_SNARE_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02743">
        <property type="entry name" value="dCache_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00015">
        <property type="entry name" value="MCPsignal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00283">
        <property type="entry name" value="MA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103190">
        <property type="entry name" value="SSF103190"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50111">
        <property type="entry name" value="CHEMOTAXIS_TRANSDUC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50192">
        <property type="entry name" value="T_SNARE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 8" id="KW-0807">Transducer</keyword>
    <keyword evidence="3 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 9" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="25"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="294"/>
            <end position="313"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="12">
        <location>
            <begin position="315"/>
            <end position="368"/>
        </location>
    </feature>
    <feature type="domain" description="Methyl-accepting transducer" evidence="10">
        <location>
            <begin position="408"/>
            <end position="630"/>
        </location>
    </feature>
    <feature type="domain" description="T-SNARE coiled-coil homology" evidence="11">
        <location>
            <begin position="560"/>
            <end position="622"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023224"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00029447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="CTQ68551.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="664" mass="70006" checksum="1A53409F8A7179CE" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A241</accession>
    <name>A0A0M7A241_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">LAX5112_01931</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the glycosyltransferase 87 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68909.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ68909">
        <property type="protein sequence ID" value="CTQ68909"/>
        <property type="gene ID" value="LAX5112_01931"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016758">
        <property type="term" value="F:hexosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018584">
        <property type="entry name" value="GT87"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09594">
        <property type="entry name" value="GT87"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="28"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="126"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="166"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="194"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="229"/>
            <end position="257"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="278"/>
            <end position="307"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="319"/>
            <end position="339"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="351"/>
            <end position="369"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="381"/>
            <end position="401"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="412"/>
            <end position="433"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="416"/>
            <end position="433"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00024033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ68909.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="433" mass="47933" checksum="C87E5F701BEB0DF8" modified="2015-12-09" version="1">MSYFMVIAAQWQASYLRFLNTGPLCNKFGGPIFFTVWLVAGILTLVFLFGVDHGLLEFDKGIAEIGAEDFAAFYRGGQLALNGAAATAYDPVVFAELFSHENKGLLFLNPPHAFLFFEPLANLPYAVARGIIIVLNLSAILGLVYILRLKLGAAPYVFTLFSCGSYFSFSVLQISPIIIFLVIYALIHHQRQPVLSALALAIATIKPQLGVLIPFFLISARSWTTLTYATVSTLFLFVLSVAFYGFIVWTAFFVSLVDGPHAVQFEDMIASMIGIRHSLSIFGASGATMLLFQLLVTLCCSVLVWYSVRNFPEKQALPIVVFLMCIAAPSFLLYDWLLLSSAMLLALGVQSRWSALLQILAGMLLLAPYTQALLRLRGSDAMILFSLFVPFLMIGVCWLYIRELPSKKHVTRDANAAPRRQSSLPRNEVFSTQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2Z1</accession>
    <name>A0A0M7A2Z1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">15-cis-phytoene desaturase</fullName>
            <ecNumber evidence="1">1.3.5.5</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">pds</name>
        <name evidence="1" type="ORF">LAX5112_01836</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.3.5.5" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68670.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671549.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01836"/>
    <dbReference type="EnsemblBacteria" id="CTQ68670">
        <property type="protein sequence ID" value="CTQ68670"/>
        <property type="gene ID" value="LAX5112_01836"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ68670.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="313" mass="33711" checksum="48681CC43EBFADFC" modified="2015-12-09" version="1">MTEPVHIGIIGAGMTGLSCARILKDAGHTPVILDKGRGVGGRLAARRAENGLQFDHGAQYITAKTEEFQKLIQSLMSVDAAGEWDMGERTGFVGVPSMNALAKALVSDLDIRRQVQVSSVTETEGHWSLAIGEETLVFDRLIITAPAPQTMALLGTGHPLSKQIAHVRLLPCWTLMAAFGDVAGALPASHRDPDAPLAWIANEKTKPGRTDRNAFVAQASSDWSKDHLELDKAAASDLMLNELCKKLDLDQSKVIHADAHRWRYAKVGIPLGEPYLSNASKTLFLGGDWCLDARVEAAFQSGTAIAETLLSEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A307</accession>
    <name>A0A0M7A307_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Signal recognition particle protein</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">Fifty-four homolog</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8 11" type="primary">ffh</name>
        <name evidence="11" type="ORF">LAX5112_02047</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components.</text>
    </comment>
    <comment type="subunit">
        <text evidence="8">Part of the signal recognition particle protein translocation system, which is composed of SRP and FtsY. SRP is a ribonucleoprotein composed of Ffh and a 4.5S RNA molecule.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
            <orientation evidence="1">Cytoplasmic side</orientation>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="8">Cytoplasm</location>
        </subcellularLocation>
        <text evidence="8">The SRP-RNC complex is targeted to the cytoplasmic membrane.</text>
    </comment>
    <comment type="domain">
        <text evidence="8">Composed of three domains: the N-terminal N domain, which is responsible for interactions with the ribosome, the central G domain, which binds GTP, and the C-terminal M domain, which binds the RNA and the signal sequence of the RNC.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the GTP-binding SRP family. SRP54 subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69259.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671730.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02047"/>
    <dbReference type="EnsemblBacteria" id="CTQ69259">
        <property type="protein sequence ID" value="CTQ69259"/>
        <property type="gene ID" value="LAX5112_02047"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048500">
        <property type="term" value="C:signal recognition particle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008312">
        <property type="term" value="F:7S RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006614">
        <property type="term" value="P:SRP-dependent cotranslational protein targeting to membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00306">
        <property type="entry name" value="SRP54"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036891">
        <property type="entry name" value="Signal_recog_part_SRP54_M_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013822">
        <property type="entry name" value="Signal_recog_particl_SRP54_hlx"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004125">
        <property type="entry name" value="Signal_recog_particle_SRP54_M"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004780">
        <property type="entry name" value="SRP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022941">
        <property type="entry name" value="SRP54"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000897">
        <property type="entry name" value="SRP54_GTPase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042101">
        <property type="entry name" value="SRP54_N_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11564">
        <property type="entry name" value="PTHR11564"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11564:SF7">
        <property type="entry name" value="PTHR11564:SF7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00448">
        <property type="entry name" value="SRP54"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02881">
        <property type="entry name" value="SRP54_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02978">
        <property type="entry name" value="SRP_SPB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00962">
        <property type="entry name" value="SRP54"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00963">
        <property type="entry name" value="SRP54_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47446">
        <property type="entry name" value="SSF47446"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00959">
        <property type="entry name" value="ffh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00300">
        <property type="entry name" value="SRP54"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 8" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="3 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 8" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="4 8" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="6 8" id="KW-0733">Signal recognition particle</keyword>
    <feature type="domain" description="SRP54" evidence="10">
        <location>
            <begin position="269"/>
            <end position="282"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="461"/>
            <end position="511"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="9">
        <location>
            <begin position="482"/>
            <end position="496"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="107"/>
            <end position="114"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="190"/>
            <end position="194"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="248"/>
            <end position="251"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004515"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005450"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023135"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS00300"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ69259.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="511" mass="54380" checksum="3B9432E09E766F26" modified="2015-12-09" version="1">MFESLSDRLSGVFDKLTGRGALSENDVNEAMREIRRALIEADVALPIVRSFTDKVRHRAVGAEVVKSVTPGQMVVKIVHDQLIEMLGEDAQPIDLNAPAPVAIMMVGLQGSGKTTTTAKIARRFTQRDKRKVLMASLDTRRPAAQEQLKILGEQNDVDTLPIIEGQGPVEIASRAMSAAKLGGYDVVLLDTAGRIHIDEPLMVEMAEVKAAANPHEIILVADSLTGQDAVNLAQSFDERVGITGIALTRMDGDGRGGAALSMQAVTGKPVKLIGTGEKSDALEDFHPKRIADRILGMGDIVSLVEKAAEAIDAEQAAKMAKKMQKGHFDLEDLAEQLKQMEKLGGMSGMMGMLPGVGKMKKQIDAAGLDDKMFKRQVAIIQSMTPTERKKPDLLKASRKKRIAAGSGVQVAEVNKLLKMHRQMADMMKKMGKGKGMLGKLMGGMGGGMPDVDPQQLEEMAKSGQMPSGMDLPKGLPGGMPGLGGPGLPPGLPGLGGPKMPGLPGMGKGKKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A330</accession>
    <name>A0A0M7A330_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">XapX domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02125</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69468.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008188779.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02125"/>
    <dbReference type="EnsemblBacteria" id="CTQ69468">
        <property type="protein sequence ID" value="CTQ69468"/>
        <property type="gene ID" value="LAX5112_02125"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009872">
        <property type="entry name" value="DUF1427"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020017">
        <property type="entry name" value="XapX_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07235">
        <property type="entry name" value="DUF1427"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03510">
        <property type="entry name" value="XapX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="32"/>
            <end position="51"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69468.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="86" mass="8901" checksum="07E4A535C682D106" modified="2015-12-09" version="1">MTWQPYVLSLAAGIGIGVIYGLIAVRSPAPPIIALLGLLGMLAGEAAVQWVRGHNDVLSNCLHSKSFSVAKSDNATAKDTPPSSNT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A360</accession>
    <name>A0A0M7A360_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Bacterial regulatory proteins, tetR family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01932</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68912.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671623.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01932"/>
    <dbReference type="EnsemblBacteria" id="CTQ68912">
        <property type="protein sequence ID" value="CTQ68912"/>
        <property type="gene ID" value="LAX5112_01932"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00440">
        <property type="entry name" value="TetR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50977">
        <property type="entry name" value="HTH_TETR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH tetR-type" evidence="2">
        <location>
            <begin position="13"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="1">
        <location>
            <begin position="36"/>
            <end position="55"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ68912.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="213" mass="24166" checksum="CBDA3FDB25D0C672" modified="2015-12-09" version="1">MNTDLISKTSGWRGSRDIWVQAAYEALLDGGIDAVKVMPLADRLGLSRTSFYGHFSNRQDLLDALITLWQTKNTGNLVQQTEAYAETVTEAMLNIFDLWLMPELFDSRLEFAVRNWAHTDPQLAKLLNEADQVRVEALEALFLRFGDAPQYASVRANTVYQTQIGYISMKEDGPSEPLEPRLARMPHYAEIFTGKPVSDPEIARFRARHPIGY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="31" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3Z5</accession>
    <name>A0A0M7A3Z5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Cytochrome c biogenesis ATP-binding export protein CcmA</fullName>
            <ecNumber evidence="7">3.6.3.41</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ccmA</name>
        <name evidence="7" type="ORF">LAX5112_02252</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.41" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69795.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02252"/>
    <dbReference type="EnsemblBacteria" id="CTQ69795">
        <property type="protein sequence ID" value="CTQ69795"/>
        <property type="gene ID" value="LAX5112_02252"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015439">
        <property type="term" value="F:ABC-type heme transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017004">
        <property type="term" value="P:cytochrome complex assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005895">
        <property type="entry name" value="ABC_transptr_haem_export_CcmA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43499">
        <property type="entry name" value="PTHR43499"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01189">
        <property type="entry name" value="ccmA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5 7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0201">Cytochrome c-type biogenesis</keyword>
    <keyword evidence="7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="6">
        <location>
            <begin position="1"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="19"/>
            <end position="26"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022748"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ69795.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="204" mass="21960" checksum="9EE814EC1AFE5765" modified="2015-12-09" version="1">MFQNLSFTLSQGTALVVTGANGIGKSSLLRTLAGLVALAGGTIRFDGGEDDRPAHEHAHYFGHQDSVKPALSVLENLEFWQSFTAPTAATGFTGELRKPMEALELLGIGHTAHLPAAYLSAGQKRRLSLSRLLVTSRPIWLMDEPTSALDRNSEALLLSLMNGHLETGGLIITATHTELVLAKIQTLHLEAAQPAEQVLEEDFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4D8</accession>
    <name>A0A0M7A4D8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Phi X174 lysis protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02303</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ69965.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671938.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ69965">
        <property type="protein sequence ID" value="CTQ69965"/>
        <property type="gene ID" value="LAX5112_02303"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007236">
        <property type="entry name" value="SlyX"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04102">
        <property type="entry name" value="SlyX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="9"/>
            <end position="57"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69965.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="70" mass="8015" checksum="1A64DECD886013B3" modified="2015-12-09" version="1">MSAEFNNRLEKLEIDLAHAAHTIDELNGVVVEQGKQIDQLTRKLLNMTDQVEELIENVLPGHQIEKPPHY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4T5</accession>
    <name>A0A0M7A4T5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02137</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69502.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671793.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ69502">
        <property type="protein sequence ID" value="CTQ69502"/>
        <property type="gene ID" value="LAX5112_02137"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ69502.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="74" mass="7999" checksum="88B3337F74AA27A9" modified="2015-12-09" version="1">MRPPKTSIFIPALQQFIQFAQAICGKELPPAESISSTLSGCGAVEVWAIPKDPEPGLDRVLIARIDLEGHPSCR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A596</accession>
    <name>A0A0M7A596_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Inner membrane protein YhaI</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yhaI_2</name>
        <name evidence="2" type="ORF">LAX5112_02180</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69606.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ69606">
        <property type="protein sequence ID" value="CTQ69606"/>
        <property type="gene ID" value="LAX5112_02180"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008523">
        <property type="entry name" value="DUF805"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34980">
        <property type="entry name" value="PTHR34980"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05656">
        <property type="entry name" value="DUF805"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="24"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="62"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="92"/>
            <end position="111"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69606.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="130" mass="14453" checksum="4A5A270764E186A6" modified="2015-12-09" version="1">MIEAVQTVLRKYAVFSGRASRSEYWWWILFVVIVSIVSQIIDGAVVAPALGFQAFEEGAGQPLSMLVSLALLLPGLGVAVRRLHDIDRSGWWFLLILVPIVGFLILLYWFVQPGTKGDNQYGEAPLQYAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6A3</accession>
    <name>A0A0M7A6A3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Threonylcarbamoyladenosine tRNA methylthiotransferase MtaB</fullName>
            <ecNumber evidence="11">2.-.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">mtaB</name>
        <name evidence="11" type="ORF">LAX5112_02007</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <dbReference type="EC" id="2.-.-.-" evidence="11"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69164.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671704.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02007"/>
    <dbReference type="EnsemblBacteria" id="CTQ69164">
        <property type="protein sequence ID" value="CTQ69164"/>
        <property type="gene ID" value="LAX5112_02007"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035596">
        <property type="term" value="F:methylthiotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006400">
        <property type="term" value="P:tRNA modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12160">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.30.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006638">
        <property type="entry name" value="Elp3/MiaB/NifB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005839">
        <property type="entry name" value="Methylthiotransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020612">
        <property type="entry name" value="Methylthiotransferase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013848">
        <property type="entry name" value="Methylthiotransferase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038135">
        <property type="entry name" value="Methylthiotransferase_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006467">
        <property type="entry name" value="MiaB-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007197">
        <property type="entry name" value="rSAM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023404">
        <property type="entry name" value="rSAM_horseshoe"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002792">
        <property type="entry name" value="TRAM_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04055">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00919">
        <property type="entry name" value="UPF0004"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDG01061">
        <property type="entry name" value="methylthiotransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00029">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00729">
        <property type="entry name" value="Elp3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01579">
        <property type="entry name" value="MiaB-like-C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00089">
        <property type="entry name" value="TIGR00089"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51449">
        <property type="entry name" value="MTTASE_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01278">
        <property type="entry name" value="MTTASE_RADICAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51918">
        <property type="entry name" value="RADICAL_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50926">
        <property type="entry name" value="TRAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="6" id="KW-0408">Iron</keyword>
    <keyword evidence="7" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="3 11" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="MTTase N-terminal" evidence="9">
        <location>
            <begin position="1"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="domain" description="Radical SAM core" evidence="10">
        <location>
            <begin position="132"/>
            <end position="362"/>
        </location>
    </feature>
    <feature type="domain" description="TRAM" evidence="8">
        <location>
            <begin position="365"/>
            <end position="419"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50926"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51449"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ69164.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="422" mass="46588" checksum="0F700B12D255E322" modified="2015-12-09" version="1">MTIDVVTFGCRLNSYESEVMKREAEAAGLKNAILINTCAVTNEAVRQARQAVRKAKRDNPDAKVIVTGCAAQTETDTFSEMDEVDLVLGNTEKLERKSYADVAAFGISETEKVRVNDIMSVEETAGHLIDGLTGRARAFVQVQNGCDHRCTFCIIPYGRGNSRSVPMGVVIDQIKRLVDNGYNEIVLTGVDITSYGADLPGEPKLGTLTAKILKMVPDFKRLRLSSIDSIEADEDLMQVITDDHRLMPHFHLSLQAGDDMILKRMKRRHLRADTIKFCEDVRKMRPDVVFGADIIAGFPTETEEMFLNSLKIVDECGLTHLHVFPFSPRPGTPAARMPQLPRNIVKERGARLREKGAQVLAQHLAMEVGKVRPVLIEKEGLGRTEQFTQVELAGGTAGDIVETRIIGHTGRHLLGEALSKAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6N3</accession>
    <name>A0A0M7A6N3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">UDP-N-acetylmuramoylalanine--D-glutamate ligase</fullName>
            <ecNumber evidence="9">6.3.2.9</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">D-glutamic acid-adding enzyme</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="9">UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9 11" type="primary">murD</name>
        <name evidence="11" type="ORF">LAX5112_02613</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>ATP + D-glutamate + UDP-N-acetyl-alpha-D-muramoyl-L-alanine = ADP + H(+) + phosphate + UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamate</text>
            <dbReference type="Rhea" id="RHEA:16429"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29986"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:83898"/>
            <dbReference type="ChEBI" id="CHEBI:83900"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.2.9"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 9">Cell wall biogenesis; peptidoglycan biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the MurCDEF family.</text>
    </comment>
    <dbReference type="EC" id="6.3.2.9" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70795.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672195.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02613"/>
    <dbReference type="EnsemblBacteria" id="CTQ70795">
        <property type="protein sequence ID" value="CTQ70795"/>
        <property type="gene ID" value="LAX5112_02613"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00219"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004326">
        <property type="term" value="F:tetrahydrofolylpolyglutamate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008764">
        <property type="term" value="F:UDP-N-acetylmuramoylalanine-D-glutamate ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007049">
        <property type="term" value="P:cell cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008360">
        <property type="term" value="P:regulation of cell shape"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1190.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.190.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00639">
        <property type="entry name" value="MurD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018109">
        <property type="entry name" value="Folylpolyglutamate_synth_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036565">
        <property type="entry name" value="Mur-like_cat_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036615">
        <property type="entry name" value="Mur_ligase_C_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013221">
        <property type="entry name" value="Mur_ligase_cen"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005762">
        <property type="entry name" value="MurD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08245">
        <property type="entry name" value="Mur_ligase_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53244">
        <property type="entry name" value="SSF53244"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53623">
        <property type="entry name" value="SSF53623"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01087">
        <property type="entry name" value="murD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01011">
        <property type="entry name" value="FOLYLPOLYGLU_SYNT_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7 9" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="4 9" id="KW-0132">Cell division</keyword>
    <keyword evidence="5 9" id="KW-0133">Cell shape</keyword>
    <keyword evidence="8 9" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="3 9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="9 11" id="KW-0436">Ligase</keyword>
    <keyword evidence="9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6 9" id="KW-0573">Peptidoglycan synthesis</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Mur_ligase_M" evidence="10">
        <location>
            <begin position="119"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="121"/>
            <end position="127"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004752"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00639"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF08245"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ70795.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="466" mass="49117" checksum="55F1E4F53A9EBBAF" modified="2015-12-09" version="1">MIEVTTFEDQTVALFGLGGSGLATAKALQAGGANVVCFDDNETRVAEAAAAGLKTQDLKTLDWSGVSALVLAPGVPLTHPVPHWSVDLARNAEVEVIGDVELFCREHRRLCPEAPFIAITGTNGKSTTTALIAHLLRELGLDVQMGGNIGTPVLELEAPRPGRHYVVECSSYQIDLAPTLDPTVGIHMNLSPDHLDRHGTLENYAAIKERLVAGAKVAIVGVDDGLSSMIADRLELARKPVCRIAGERELTAGIYAHNGRLIEAHDGAQTEVALLMGIDSLRGDHNAQNAAAAFACLRALEIPADKIAAAMKSFPGLHHRMEIVARTGRTLFINDSKATNADAAARALASFDRIYWIAGGRAKAGGISSLDEYFSNIAKAFLIGEAAEEFAKTLDGHVPYAVSGTLTQAVRDAAAEAAEDGAEEIAILLSPACASFDQYANFELRGAAFVDAVRALPGGGNTQEVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6R3</accession>
    <name>A0A0M7A6R3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative oxidoreductase</fullName>
            <ecNumber evidence="2">1.-.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02601</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the short-chain dehydrogenases/reductases (SDR) family.</text>
    </comment>
    <dbReference type="EC" id="1.-.-.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70758.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672185.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02601"/>
    <dbReference type="EnsemblBacteria" id="CTQ70758">
        <property type="protein sequence ID" value="CTQ70758"/>
        <property type="gene ID" value="LAX5112_02601"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00106">
        <property type="entry name" value="adh_short"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU000363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70758.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="242" mass="25914" checksum="1E90F70EAE2530FE" modified="2015-12-09" version="1">MSTEKTIVITGGGIGLGAQLTRLYGHAGHRVIICGRTESALRAAEDHGKVHSFCLDLTDPGDRRRFVEGIYDLDRPIDLLINNAGIQQAVDFSIGSGSPELIEAELAINLQAPIELTADLLPLLKQASSARIAFVTSALGRVPKQSTPVYCATKAGLSAFARSLRYQLEKTGIGVTDIVPDLLRTRMAAGREQSALSALDAAQTIVRGLSAGQDEIRLGRVPVLYTLHRFLPSVAYKLLKAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A703</accession>
    <name>A0A0M7A703_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">DNA helicase</fullName>
            <ecNumber evidence="3">3.6.4.12</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">uvrD</name>
        <name evidence="10" type="ORF">LAX5112_02632</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + H2O = ADP + H(+) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="3.6.4.12"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the helicase family. UvrD subfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.12" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70858.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672208.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02632"/>
    <dbReference type="EnsemblBacteria" id="CTQ70858">
        <property type="protein sequence ID" value="CTQ70858"/>
        <property type="gene ID" value="LAX5112_02632"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003678">
        <property type="term" value="F:DNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.160">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013986">
        <property type="entry name" value="DExx_box_DNA_helicase_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014017">
        <property type="entry name" value="DNA_helicase_UvrD-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000212">
        <property type="entry name" value="DNA_helicase_UvrD/REP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014016">
        <property type="entry name" value="UvrD-like_ATP-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11070">
        <property type="entry name" value="PTHR11070"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00580">
        <property type="entry name" value="UvrD-helicase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13361">
        <property type="entry name" value="UvrD_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51198">
        <property type="entry name" value="UVRD_HELICASE_ATP_BIND"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51217">
        <property type="entry name" value="UVRD_HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6 10" id="KW-0347">Helicase</keyword>
    <keyword evidence="6 10" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="UvrD-like helicase ATP-binding" evidence="8">
        <location>
            <begin position="60"/>
            <end position="341"/>
        </location>
    </feature>
    <feature type="domain" description="UvrD-like helicase C-terminal" evidence="9">
        <location>
            <begin position="342"/>
            <end position="611"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="718"/>
            <end position="758"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="7">
        <location>
            <begin position="23"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="7">
        <location>
            <begin position="718"/>
            <end position="757"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="81"/>
            <end position="88"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001665"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009922"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012551"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00560"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51198"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51217"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ70858.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="822" mass="92120" checksum="923C5C0862173459" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7K8</accession>
    <name>A0A0M7A7K8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Ribonuclease HII</fullName>
            <shortName evidence="11">RNase HII</shortName>
            <ecNumber evidence="11">3.1.26.4</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11 14" type="primary">rnhB</name>
        <name evidence="14" type="ORF">LAX5112_02416</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3 11 12">Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>Endonucleolytic cleavage to 5'-phosphomonoester.</text>
            <dbReference type="EC" id="3.1.26.4"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="11">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
        <cofactor evidence="11">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="11">Manganese or magnesium. Binds 1 divalent metal ion per monomer in the absence of substrate. May bind a second metal ion after substrate binding.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="11">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 11 12">Belongs to the RNase HII family.</text>
    </comment>
    <dbReference type="EC" id="3.1.26.4" evidence="11"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70220.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672027.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02416"/>
    <dbReference type="EnsemblBacteria" id="CTQ70220">
        <property type="protein sequence ID" value="CTQ70220"/>
        <property type="gene ID" value="LAX5112_02416"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030145">
        <property type="term" value="F:manganese ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004523">
        <property type="term" value="F:RNA-DNA hybrid ribonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006401">
        <property type="term" value="P:RNA catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd07182">
        <property type="entry name" value="RNase_HII_bacteria_HII_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00052_B">
        <property type="entry name" value="RNase_HII_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022898">
        <property type="entry name" value="RNase_HII"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001352">
        <property type="entry name" value="RNase_HII/HIII"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024567">
        <property type="entry name" value="RNase_HII/HIII_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10954">
        <property type="entry name" value="PTHR10954"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10954:SF18">
        <property type="entry name" value="PTHR10954:SF18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01351">
        <property type="entry name" value="RNase_HII"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 11" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="8 11 12" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="9 11 12" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="10 11" id="KW-0464">Manganese</keyword>
    <keyword evidence="7 11" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6 11 12" id="KW-0540">Nuclease</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RNase_HII" evidence="13">
        <location>
            <begin position="33"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="36"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="37"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="127"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000077"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00007383"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022759"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU003515"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF01351"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="CTQ70220.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="218" mass="23292" checksum="7DF9CE202A81FE66" modified="2015-12-09" version="1">MTKTPSLFDLAFPDNPDQKIEKKHAKSYDGLLCGVDEAGRGPWAGPVVTAAVILDYANVPAGLNDSKKLTEAKRESLFGEILKTSWVCAASASPATVDKLNIRTATLRAMVRAVNGLPRVPQYVLIDGRDVPPGLAQPGQALIKGDGRCLCVAAASIVAKVLRDRMMIALEPEFPGYGFAQHKGYGVPAHQAALDTLGPTEHHRMSFKPVRLAAAIPE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7N6</accession>
    <name>A0A0M7A7N6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Ankyrin repeat protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02504</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70426.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02504"/>
    <dbReference type="EnsemblBacteria" id="CTQ70426">
        <property type="protein sequence ID" value="CTQ70426"/>
        <property type="gene ID" value="LAX5112_02504"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
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        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002110">
        <property type="entry name" value="Ankyrin_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036770">
        <property type="entry name" value="Ankyrin_rpt-contain_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12796">
        <property type="entry name" value="Ank_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00248">
        <property type="entry name" value="ANK"/>
        <property type="match status" value="7"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48403">
        <property type="entry name" value="SSF48403"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50088">
        <property type="entry name" value="ANK_REPEAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0040">ANK repeat</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="repeat" description="ANK" evidence="1">
        <location>
            <begin position="298"/>
            <end position="330"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="38"/>
            <end position="55"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ70426.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="565" mass="61097" checksum="AF54A14161DC350D" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7P3</accession>
    <name>A0A0M7A7P3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Ferric reductase like transmembrane component</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_02194</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69644.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671835.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02194"/>
    <dbReference type="EnsemblBacteria" id="CTQ69644">
        <property type="protein sequence ID" value="CTQ69644"/>
        <property type="gene ID" value="LAX5112_02194"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013130">
        <property type="entry name" value="Fe3_Rdtase_TM_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01794">
        <property type="entry name" value="Ferric_reduct"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="39"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="76"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="114"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="domain" description="Ferric oxidoreductase" evidence="6">
        <location>
            <begin position="44"/>
            <end position="156"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF01794"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ69644.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="211" mass="22485" checksum="26988A4D65A318DA" modified="2015-12-09" version="1">MKPFQKAVLWGLIGAVVIAPLLAAASSPLLAWRDPVYIASGFAGILAMALLVLQPLLAGGLLPGVSLAKSRAVHRWAGTLLVLMVVLHVGGLWVTSPPDVVDALLFRSPTPFSAWGVIAMWCIFAAGLVAVLRRRLRWRPKTWQKIHSTLALGVVIGGAAHAFLIEGTMEPVTKAILCVAAVVVTLKAIRDLRIWSGRAIANPNTRTGSVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7Q3</accession>
    <name>A0A0M7A7Q3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02199</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69654.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ69654">
        <property type="protein sequence ID" value="CTQ69654"/>
        <property type="gene ID" value="LAX5112_02199"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ69654.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="125" mass="14423" checksum="8CEABCCAB418F48C" modified="2015-12-09" version="1">MGMDNLMELKEFRDYWRNSEDYKRENYGNDTVEYDVIAVYDFGKSPGKIVFNSLMKVCLQPGFNDGRVDLDEAPHASVEDYHLTFYPKFQEYEFDQNTGDFIITGASDKMGGDYVVTISPAMQKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7W1</accession>
    <name>A0A0M7A7W1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02753</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71245.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672313.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02753"/>
    <dbReference type="EnsemblBacteria" id="CTQ71245">
        <property type="protein sequence ID" value="CTQ71245"/>
        <property type="gene ID" value="LAX5112_02753"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025489">
        <property type="entry name" value="DUF4381"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14316">
        <property type="entry name" value="DUF4381"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="35"/>
            <end position="55"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71245.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="156" mass="17234" checksum="4DEFA5C6F0EBDF75" modified="2015-12-09" version="1">MKDDWTGLNLAELIDLLEPVPEPTPVSMMPQTAGWLWLGAILLVMLGICFWKLLLWRRKTAYRRGALAELATCPNNPQRLAELLRRTALSAYTRQDVAALHGSEWLAFLDRAYGGTGFSNGPGKAVAEAPYKKAGDSNDLKTLIRTWIKTHKGAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8K8</accession>
    <name>A0A0M7A8K8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Peptidoglycan synthase FtsI</fullName>
            <ecNumber evidence="5">2.4.1.129</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ftsI</name>
        <name evidence="5" type="ORF">LAX5112_02609</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.4.1.129" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70782.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672191.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02609"/>
    <dbReference type="EnsemblBacteria" id="CTQ70782">
        <property type="protein sequence ID" value="CTQ70782"/>
        <property type="gene ID" value="LAX5112_02609"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008658">
        <property type="term" value="F:penicillin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008955">
        <property type="term" value="F:peptidoglycan glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.710.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012338">
        <property type="entry name" value="Beta-lactam/transpept-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005311">
        <property type="entry name" value="PBP_dimer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036138">
        <property type="entry name" value="PBP_dimer_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001460">
        <property type="entry name" value="PCN-bd_Tpept"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03717">
        <property type="entry name" value="PBP_dimer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00905">
        <property type="entry name" value="Transpeptidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56519">
        <property type="entry name" value="SSF56519"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56601">
        <property type="entry name" value="SSF56601"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="1 2" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="34"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="domain" description="PBP_dimer" evidence="4">
        <location>
            <begin position="74"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="domain" description="Transpeptidase" evidence="3">
        <location>
            <begin position="248"/>
            <end position="532"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00905"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF03717"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ70782.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="570" mass="62057" checksum="95D2151197C9607D" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8W5</accession>
    <name>A0A0M7A8W5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Phospholipid N-methyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_02780</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71319.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672332.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02780"/>
    <dbReference type="EnsemblBacteria" id="CTQ71319">
        <property type="protein sequence ID" value="CTQ71319"/>
        <property type="gene ID" value="LAX5112_02780"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001737">
        <property type="entry name" value="KsgA/Erm"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11727">
        <property type="entry name" value="PTHR11727"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00398">
        <property type="entry name" value="RrnaAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 4" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="2 4" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ71319.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="219" mass="24220" checksum="0896474E57CC46C8" modified="2015-12-09" version="1">MKRIGIKREAIRDKLEKADAVRMKVLDEVKFIRSWAQNPLRTGAVAPSGPELASKMVSFLILRPHSKVVELGPGTGVVTKALFDAGFSNRDLNLIEYSTDFCEHLGGRYPGLPVLQGDAYALRQTLSKPGGFLHGAAEDDLILDGIVSSLPLLNRPEICRRAFLEEALQLLKPGAPLIQFSYGLAAPVKPLTRSVSVYSSEWIWKNLPPARVWVYRKAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8W8</accession>
    <name>A0A0M7A8W8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02877</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71595.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ71595">
        <property type="protein sequence ID" value="CTQ71595"/>
        <property type="gene ID" value="LAX5112_02877"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809331" evidence="1">
        <location>
            <begin position="24"/>
            <end position="143"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71595.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="143" mass="15909" checksum="C5294C94E76C13BD" modified="2015-12-09" version="1">MQRTLLAIAFVAGLAVLSLPAQAQTGSGTERIYCPIPEDGVWVNPDAAPKEISRVEVESRCENEQVFVRARAFTSCIPRDCKWGWTKGELRSDGAVRVLLIGFLSSKDMTLKAFGDLLDVRVVNILNDLSEPNETKVYNLRRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8X1</accession>
    <name>A0A0M7A8X1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">RHH_4 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02643</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70892.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672216.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70892">
        <property type="protein sequence ID" value="CTQ70892"/>
        <property type="gene ID" value="LAX5112_02643"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3990.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027373">
        <property type="entry name" value="RHH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038268">
        <property type="entry name" value="RHH_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13467">
        <property type="entry name" value="RHH_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RHH_4" evidence="1">
        <location>
            <begin position="16"/>
            <end position="83"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13467"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70892.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="119" mass="13501" checksum="3C0B11D7ABDD7E75" modified="2015-12-09" version="1">MCKLFVEAATELWQCRARSLRIDGMVTSVRLENFFWKVLEELAERDGMNVVQLITRLHNESIAAGHDLGNFTSFLRVCCGRYLALQLSGDVPTDKSQTISGLNVDEILKSEARQIPDWN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8Y3</accession>
    <name>A0A0M7A8Y3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Outer membrane flp protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">fadL_1</name>
        <name evidence="9" type="ORF">LAX5112_02710</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell outer membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the OmpP1/FadL family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71081.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672265.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02710"/>
    <dbReference type="EnsemblBacteria" id="CTQ71081">
        <property type="protein sequence ID" value="CTQ71081"/>
        <property type="gene ID" value="LAX5112_02710"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009279">
        <property type="term" value="C:cell outer membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005017">
        <property type="entry name" value="OMPP1/FadL/TodX"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35093">
        <property type="entry name" value="PTHR35093"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03349">
        <property type="entry name" value="Toluene_X"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0998">Cell outer membrane</keyword>
    <keyword evidence="6" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-0732">Signal</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <feature type="signal peptide" evidence="8">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809208" evidence="8">
        <location>
            <begin position="24"/>
            <end position="437"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004571"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023237"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ71081.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="437" mass="46430" checksum="15250E5C488CBA29" modified="2015-12-09" version="1">MRATKKIVLMTSTAIAASIVASAASAGGFALREQSAYYQGTSFAGNGTSSSSISSMFWNPATITSMDGKINFEAHNAFIIPKADITGSNTVPNSLTSPTGLITTSFDTGDIGHDAWIPASYASYNLNDQVYLGVAINGAFGLSTKPNDSNWTGAGYNRSSKIFSINLNPVVGYKINEMFSVAIGPQIQYADVRLTNASFSPTIPGATLFPGQQLDGDGVGVGLTAGVTIKPTATTEIGIGYRSAIFTDIDGTIAAPNPANPFTTAVTDVKTVLATPDMITLSAKQSITDDIRVLGTFEWTNWSRLKEPQITADATGATVTTLPFNYNDGYYLAVGGEYDFNDKLTLRAGAAYEWSPIDDKIRSARLPDNDRIWLSAGASYVFNEHFSFDLGYTHIFGTDTDLNLVPGHQDYSASKGSLTGSVDSSVDILTASVRIKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A988</accession>
    <name>A0A0M7A988_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Ribose transport system permease protein RbsC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">rbsC_3</name>
        <name evidence="8" type="ORF">LAX5112_02690</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71022.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672249.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02690"/>
    <dbReference type="EnsemblBacteria" id="CTQ71022">
        <property type="protein sequence ID" value="CTQ71022"/>
        <property type="gene ID" value="LAX5112_02690"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001851">
        <property type="entry name" value="ABC_transp_permease"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02653">
        <property type="entry name" value="BPD_transp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="49"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="83"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="130"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="200"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="256"/>
            <end position="274"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="311"/>
            <end position="330"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="336"/>
            <end position="355"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ71022.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="360" mass="38166" checksum="61D6A6B9B3D2C567" modified="2015-12-09" version="1">MTSETKTDRGPAEFEAAASQGPQSVAEFDDHHQSIGQKIQHTLHQTPSLVPLIVLLLSVLIFGLLLGSKFFSPFAMTLILQQVQIVGIVAAAQSIVILTAGIDLSVGAIMVLSSVVMGQFTFRYGLPVEVAIAAGLICGTICGYINGFLVAVVKLPPFIVTLGMWQIVLATNFLYSANETIRSQDISEQAPLLQFFGNKVAIGGAIFTYGVIFMVLLVLVLAYVLRQTAWGRHVYAIGDDPEAAQLSGVQVKKVQISVYMLSGLICAFAGWAMIGRIGSVSPTTGQLANIESITAVVIGGISLFGGRGSILGTLFGALIVGVFTLGLRLLGADAQWTYLLIGLLIIAAVAVDQWIRKVSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AA36</accession>
    <name>A0A0M7AA36_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Histone deacetylase-like amidohydrolase</fullName>
            <ecNumber evidence="3">3.5.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">hdaH_2</name>
        <name evidence="3" type="ORF">LAX5112_03004</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the histone deacetylase family.</text>
    </comment>
    <dbReference type="EC" id="3.5.1.-" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72005.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03004"/>
    <dbReference type="EnsemblBacteria" id="CTQ72005">
        <property type="protein sequence ID" value="CTQ72005"/>
        <property type="gene ID" value="LAX5112_03004"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004407">
        <property type="term" value="F:histone deacetylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016575">
        <property type="term" value="P:histone deacetylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd09993">
        <property type="entry name" value="HDAC_classIV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.800.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044150">
        <property type="entry name" value="HDAC_classIV"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000286">
        <property type="entry name" value="His_deacetylse"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023801">
        <property type="entry name" value="His_deacetylse_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037138">
        <property type="entry name" value="His_deacetylse_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023696">
        <property type="entry name" value="Ureohydrolase_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00850">
        <property type="entry name" value="Hist_deacetyl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01270">
        <property type="entry name" value="HDASUPER"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52768">
        <property type="entry name" value="SSF52768"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Hist_deacetyl" evidence="2">
        <location>
            <begin position="41"/>
            <end position="298"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ72005.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="330" mass="36202" checksum="3FA203822947191C" modified="2015-12-09" version="1">MAVMWLFGQAVLSIFEQMTLPIVHHPAYCADLPANHRFPMDKFRAVAELIRAEGLLGNGDFYRPRPAPFEWVALAHDPVYVDQVFNAEVPEKIAREIGFPMRADIALRARCATGGSVLTGYLALEHGLACNTAGGSHHARRAHGAGFCVFNDVAVALKVLQADGAIGKALVIDLDVHQGDGTADIFSGDPDIVTFSMHSAKNYPVRKVPSHLDVALPDAMEDGAYLAALQEVLPDLLRQKVWDLVFYNAGVDPYFEDRLGRLALSRDGLKARDRYVIETVRSLGIPLAGVLGGGYSNDIDELADRHVTLHRTALSIWEAERRSERTSFFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAI3</accession>
    <name>A0A0M7AAI3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Primosomal protein N'</fullName>
            <ecNumber evidence="9">3.6.4.-</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">ATP-dependent helicase PriA</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9 11" type="primary">priA</name>
        <name evidence="11" type="ORF">LAX5112_02889</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA.</text>
    </comment>
    <comment type="subunit">
        <text evidence="9">Component of the primosome.</text>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the helicase family. PriA subfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.-" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71631.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672403.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02889"/>
    <dbReference type="EnsemblBacteria" id="CTQ71631">
        <property type="protein sequence ID" value="CTQ71631"/>
        <property type="gene ID" value="LAX5112_02889"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990077">
        <property type="term" value="C:primosome complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003678">
        <property type="term" value="F:DNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006269">
        <property type="term" value="P:DNA replication, synthesis of RNA primer"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006268">
        <property type="term" value="P:DNA unwinding involved in DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1440.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00983">
        <property type="entry name" value="PriA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006935">
        <property type="entry name" value="Helicase/UvrB_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005259">
        <property type="entry name" value="PriA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041222">
        <property type="entry name" value="PriA_3primeBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042115">
        <property type="entry name" value="PriA_3primeBD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041236">
        <property type="entry name" value="PriA_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040498">
        <property type="entry name" value="PriA_CRR"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17764">
        <property type="entry name" value="PriA_3primeBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18074">
        <property type="entry name" value="PriA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18319">
        <property type="entry name" value="PriA_CRR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04851">
        <property type="entry name" value="ResIII"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00595">
        <property type="entry name" value="priA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 9" id="KW-0235">DNA replication</keyword>
    <keyword evidence="8 9" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6 9" id="KW-0347">Helicase</keyword>
    <keyword evidence="5 9 11" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3 9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="1 9" id="KW-0639">Primosome</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0862">Zinc</keyword>
    <keyword evidence="9" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="10">
        <location>
            <begin position="212"/>
            <end position="378"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="C4-type" evidence="9">
        <location>
            <begin position="439"/>
            <end position="451"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="C4-type" evidence="9">
        <location>
            <begin position="466"/>
            <end position="482"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022515"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00983"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ71631.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="731" mass="79568" checksum="E8602BACCFDD28C7" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAR0</accession>
    <name>A0A0M7AAR0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Peptidase propeptide and YPEB domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_02846</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71506.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672371.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ71506">
        <property type="protein sequence ID" value="CTQ71506"/>
        <property type="gene ID" value="LAX5112_02846"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025711">
        <property type="entry name" value="PepSY"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03413">
        <property type="entry name" value="PepSY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809238" evidence="2">
        <location>
            <begin position="26"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="domain" description="PepSY" evidence="3">
        <location>
            <begin position="35"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="87"/>
            <end position="113"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF03413"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ71506.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="113" mass="11864" checksum="03433D86B79F882D" modified="2015-12-09" version="1">MNMKIIAGTVVAGTVLATGAVGAVAAQTATSPTALTEAQAIEIALKEVPGTVQETEFEREDGKEIFEIEIVTADGVEMEVEIDAASGTVLEIEQDDDYDDDDDYKKGGNKRAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AB95</accession>
    <name>A0A0M7AB95_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Lauroyl/myristoyl acyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">LAX5112_02904</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71676.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672412.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ71676">
        <property type="protein sequence ID" value="CTQ71676"/>
        <property type="gene ID" value="LAX5112_02904"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016746">
        <property type="term" value="F:acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009247">
        <property type="term" value="P:glycolipid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004960">
        <property type="entry name" value="LipA_acyltrans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03279">
        <property type="entry name" value="Lip_A_acyltrans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5 6" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="2" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="1" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022519"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ71676.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="314" mass="35745" checksum="EE22DDADB3AD7283" modified="2015-12-09" version="1">MQNVLQTRWRIDCEKRRSPRGNIDVHRLLGDWFDDAEWRRDLSRIPSRQRRVMLSEIGRDMFVDNIGNYAKELRWNMELVDWVWTDEQRRSLALDHARLLFASLSDSIDFASRTFPQTELDVSGAEHVLDPSETGRGVILVSVFQTHPGYAFVSPPLRDRKIGVIRKAPGGSASLTLDGLPKSVAELPASTAAVRPLLKLLNEGSVTAAYCDYIYEGSGTIEAPMFGAWVSVSRSLLKIARQTNAAIVPMAVARDLDLSKELVRVEFFPDLTDGDSRRFQLSDLSFRLGIALECLIRRYPVQWRLWNTLRDRLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABN7</accession>
    <name>A0A0M7ABN7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">ATP-dependent DNA helicase RecQ</fullName>
            <ecNumber evidence="4">3.6.4.12</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">recQ_2</name>
        <name evidence="4" type="ORF">LAX5112_03019</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.6.4.12" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72041.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672509.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03019"/>
    <dbReference type="EnsemblBacteria" id="CTQ72041">
        <property type="protein sequence ID" value="CTQ72041"/>
        <property type="gene ID" value="LAX5112_03019"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003678">
        <property type="term" value="F:DNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016818">
        <property type="term" value="F:hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013701">
        <property type="entry name" value="DEAD/DEAH_assoc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026362">
        <property type="entry name" value="DEXH_lig_assoc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017170">
        <property type="entry name" value="Lhr-like_ATP-dep_RNA_helic_prd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045628">
        <property type="entry name" value="Lhr_WH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08494">
        <property type="entry name" value="DEAD_assoc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19306">
        <property type="entry name" value="Lhr_WH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF037307">
        <property type="entry name" value="Lhr-like_helic_prd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR04121">
        <property type="entry name" value="DEXH_lig_assoc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0347">Helicase</keyword>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="2">
        <location>
            <begin position="29"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase C-terminal" evidence="3">
        <location>
            <begin position="249"/>
            <end position="399"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="105"/>
            <end position="127"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ72041.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="833" mass="92031" checksum="EA76E7CF9A497CE5" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACR9</accession>
    <name>A0A0M7ACR9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DUF6460 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03006</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72010.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008188590.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03006"/>
    <dbReference type="EnsemblBacteria" id="CTQ72010">
        <property type="protein sequence ID" value="CTQ72010"/>
        <property type="gene ID" value="LAX5112_03006"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045594">
        <property type="entry name" value="DUF6460"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20061">
        <property type="entry name" value="DUF6460"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="21"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="60"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="domain" description="DUF6460" evidence="2">
        <location>
            <begin position="53"/>
            <end position="88"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF20061"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ72010.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="91" mass="9982" checksum="FC3E8DD2A234F7F6" modified="2015-12-09" version="1">MSDNNLNRFMGGSPGQVVLRLVFLSFVVGIILAALNLNPIDLVHMAIEFVERLWNMGFHALGRLGGYLVAGAVVVIPIWILLRLLAVGKNR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AD35</accession>
    <name>A0A0M7AD35_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">cheA</name>
        <name evidence="10" type="ORF">LAX5112_03221</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72547.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672649.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03221"/>
    <dbReference type="EnsemblBacteria" id="CTQ72547">
        <property type="protein sequence ID" value="CTQ72547"/>
        <property type="gene ID" value="LAX5112_03221"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006935">
        <property type="term" value="P:chemotaxis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00088">
        <property type="entry name" value="HPT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.560">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.160">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004105">
        <property type="entry name" value="CheA-like_dim"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037006">
        <property type="entry name" value="CheA-like_homodim_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036061">
        <property type="entry name" value="CheW-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002545">
        <property type="entry name" value="CheW-lke_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036641">
        <property type="entry name" value="HPT_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008207">
        <property type="entry name" value="Sig_transdc_His_kin_Hpt_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01584">
        <property type="entry name" value="CheW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02895">
        <property type="entry name" value="H-kinase_dim"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01627">
        <property type="entry name" value="Hpt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00260">
        <property type="entry name" value="CheW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01231">
        <property type="entry name" value="H-kinase_dim"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00073">
        <property type="entry name" value="HPT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47226">
        <property type="entry name" value="SSF47226"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50341">
        <property type="entry name" value="SSF50341"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50851">
        <property type="entry name" value="CHEW"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50894">
        <property type="entry name" value="HPT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="HPt" evidence="9">
        <location>
            <begin position="1"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="6">
        <location>
            <begin position="242"/>
            <end position="492"/>
        </location>
    </feature>
    <feature type="domain" description="CheW-like" evidence="8">
        <location>
            <begin position="494"/>
            <end position="636"/>
        </location>
    </feature>
    <feature type="domain" description="CheW-like" evidence="8">
        <location>
            <begin position="663"/>
            <end position="791"/>
        </location>
    </feature>
    <feature type="domain" description="Response regulatory" evidence="7">
        <location>
            <begin position="807"/>
            <end position="924"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="135"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="189"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="218"/>
            <end position="232"/>
        </location>
    </feature>
    <feature type="modified residue" description="Phosphohistidine" evidence="3">
        <location>
            <position position="44"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="4">
        <location>
            <position position="857"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50851"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50894"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ72547.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="931" mass="101235" checksum="17124B0FCCC88C89" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AD62</accession>
    <name>A0A0M7AD62_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Flagellum-specific ATP synthase</fullName>
            <ecNumber evidence="4">7.1.2.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">yscN</name>
        <name evidence="13" type="ORF">LAX5112_03229</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Probable catalytic subunit of a protein translocase for flagellum-specific export, or a proton translocase involved in local circuits at the flagellum.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the ATPase alpha/beta chains family.</text>
    </comment>
    <dbReference type="EC" id="7.1.2.2" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72571.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672656.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03229"/>
    <dbReference type="EnsemblBacteria" id="CTQ72571">
        <property type="protein sequence ID" value="CTQ72571"/>
        <property type="gene ID" value="LAX5112_03229"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009288">
        <property type="term" value="C:bacterial-type flagellum"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030257">
        <property type="term" value="C:type III protein secretion system complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046933">
        <property type="term" value="F:proton-transporting ATP synthase activity, rotational mechanism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046961">
        <property type="term" value="F:proton-transporting ATPase activity, rotational mechanism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044781">
        <property type="term" value="P:bacterial-type flagellum organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030254">
        <property type="term" value="P:protein secretion by the type III secretion system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020003">
        <property type="entry name" value="ATPase_a/bsu_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000194">
        <property type="entry name" value="ATPase_F1/V1/A1_a/bsu_nucl-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005714">
        <property type="entry name" value="ATPase_T3SS_FliI/YscN"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022426">
        <property type="entry name" value="FliI_clade3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040627">
        <property type="entry name" value="T3SS_ATPase_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00006">
        <property type="entry name" value="ATP-synt_ab"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18269">
        <property type="entry name" value="T3SS_ATPase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03498">
        <property type="entry name" value="FliI_clade3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01026">
        <property type="entry name" value="fliI_yscN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00152">
        <property type="entry name" value="ATPASE_ALPHA_BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1005">Bacterial flagellum biogenesis</keyword>
    <keyword evidence="10" id="KW-1006">Bacterial flagellum protein export</keyword>
    <keyword evidence="13" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="8" id="KW-0653">Protein transport</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-1278">Translocase</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="domain" description="AAA" evidence="12">
        <location>
            <begin position="157"/>
            <end position="341"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="113"/>
            <end position="139"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003290"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012473"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00020580"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022795"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023225"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="CTQ72571.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="441" mass="47623" checksum="F05FF35E91242405" modified="2015-12-09" version="1">MKALFAEIDSLMATEIYGRVAAVQGLLVEIAGPIHEMSVGSRLLIDSGEDNPQVPAEVVGFREGHALCMPFSGLEGVRMGCKAVITSRESVVHPSNAWLGRVINALGEPIDGKGPLPNGGLPRKLRSAPPPASERARVGPPLDLGVRALNTFVTCCEGQRMGIFAGSGVGKSVLMSMLARNTQCDTAVIGLIGERGREVQEFIEDDLGEEGLARSVVVVATSDESVLMRRQAAYLAMTVAEHFRDEGDKVLCMMDSVTRFAMAQREIGLSIGEPPTSKGYTPTVFTELPRLLERAGPGKSGSGSITGLFTVLVEGDNHNEPVADAVRGILDGHVVMERGIAERGRYPAINVLKSVSRTMPRCVPPEQQPVLRKAKQLLSTYTDMEELIRLGAYRRGSDPTVDEAIYRFGPIDDFLNQGKDESTTLFEGYVQLANLLEMTQE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="36" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADU1</accession>
    <name>A0A0M7ADU1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7 8">Lon protease</fullName>
            <ecNumber evidence="7 8">3.4.21.53</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">ATP-dependent protease La</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7 17" type="primary">lon</name>
        <name evidence="17" type="ORF">LAX5112_03500</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="18" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="18">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7 8 11">
            <text>Hydrolysis of proteins in presence of ATP.</text>
            <dbReference type="EC" id="3.4.21.53"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="7 8">Homohexamer. Organized in a ring with a central cavity.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 7 8">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="induction">
        <text evidence="7">By heat shock.</text>
    </comment>
    <comment type="similarity">
        <text evidence="7 8 11 12">Belongs to the peptidase S16 family.</text>
    </comment>
    <dbReference type="EC" id="3.4.21.53" evidence="7 8"/>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73315.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672918.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03500"/>
    <dbReference type="EnsemblBacteria" id="CTQ73315">
        <property type="protein sequence ID" value="CTQ73315"/>
        <property type="gene ID" value="LAX5112_03500"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004176">
        <property type="term" value="F:ATP-dependent peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004252">
        <property type="term" value="F:serine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034605">
        <property type="term" value="P:cellular response to heat"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006515">
        <property type="term" value="P:protein quality control for misfolded or incompletely synthesized proteins"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.130.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01973">
        <property type="entry name" value="lon_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003959">
        <property type="entry name" value="ATPase_AAA_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027543">
        <property type="entry name" value="Lon_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004815">
        <property type="entry name" value="Lon_bac/euk-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008269">
        <property type="entry name" value="Lon_proteolytic"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027065">
        <property type="entry name" value="Lon_Prtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003111">
        <property type="entry name" value="Lon_prtase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046336">
        <property type="entry name" value="Lon_prtase_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008268">
        <property type="entry name" value="Peptidase_S16_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015947">
        <property type="entry name" value="PUA-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014721">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold_subgr"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10046">
        <property type="entry name" value="PTHR10046"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00004">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05362">
        <property type="entry name" value="Lon_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02190">
        <property type="entry name" value="LON_substr_bdg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001174">
        <property type="entry name" value="Lon_proteas"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00464">
        <property type="entry name" value="LON"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="SSF54211"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88697">
        <property type="entry name" value="SSF88697"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00763">
        <property type="entry name" value="lon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51787">
        <property type="entry name" value="LON_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51786">
        <property type="entry name" value="LON_PROTEOLYTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01046">
        <property type="entry name" value="LON_SER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="evidence at transcript level"/>
    <keyword evidence="5 7 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="13" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="7 8" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7 8 11" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3 7 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="2 7 8" id="KW-0645">Protease</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7 8" id="KW-0720">Serine protease</keyword>
    <keyword evidence="6 7" id="KW-0346">Stress response</keyword>
    <feature type="domain" description="Lon N-terminal" evidence="16">
        <location>
            <begin position="17"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="domain" description="Lon proteolytic" evidence="15">
        <location>
            <begin position="597"/>
            <end position="778"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="14">
        <location>
            <begin position="788"/>
            <end position="809"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="13">
        <location>
            <begin position="196"/>
            <end position="277"/>
        </location>
    </feature>
    <feature type="active site" evidence="7 9 11">
        <location>
            <position position="684"/>
        </location>
    </feature>
    <feature type="active site" evidence="7 9 11">
        <location>
            <position position="727"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7 10">
        <location>
            <begin position="362"/>
            <end position="369"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01973"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRNR" id="PIRNR001174"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR001174-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR001174-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01122"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU000591"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS51786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="PROSITE" id="PS51787"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="CTQ73315.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="809" mass="89710" checksum="A74D7E152CED351F" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEE7</accession>
    <name>A0A0M7AEE7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative transposase OrfB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03295</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72776.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72776">
        <property type="protein sequence ID" value="CTQ72776"/>
        <property type="gene ID" value="LAX5112_03295"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001584">
        <property type="entry name" value="Integrase_cat-core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13683">
        <property type="entry name" value="rve_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50994">
        <property type="entry name" value="INTEGRASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Integrase catalytic" evidence="1">
        <location>
            <begin position="1"/>
            <end position="152"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50994"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72776.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="158" mass="18340" checksum="D9EDB0A19610794B" modified="2015-12-09" version="1">MDFVHDQLATGRKIRVLTVIDTYSRYVPALDPRFSYRGEDVVRTLETVCTRIGYPKTIRVDQVSEFISWDLDLWAYQKGVTLDFFRPGKPTDNAFIEAFNGRFRAECRNAHWFLSLADAAEKLEDWRKDYNEHRPHIAIGNKVPKDLMKSEHAASPCS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEV5</accession>
    <name>A0A0M7AEV5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Methanethiol S-methyltransferase</fullName>
            <ecNumber evidence="5">2.1.1.334</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">LAX5112_03386</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Catalyzes the methylation of methanethiol (MeSH) to yield dimethylsulphide (DMS).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>methanethiol + S-adenosyl-L-methionine = dimethyl sulfide + H(+) + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:50428"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16007"/>
            <dbReference type="ChEBI" id="CHEBI:17437"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="EC" id="2.1.1.334"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Membrane</location>
            <topology evidence="3">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the nurim family.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.334" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72962.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03386"/>
    <dbReference type="EnsemblBacteria" id="CTQ72962">
        <property type="protein sequence ID" value="CTQ72962"/>
        <property type="gene ID" value="LAX5112_03386"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033580">
        <property type="entry name" value="Nurim-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31040">
        <property type="entry name" value="PTHR31040"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 9" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="30"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="69"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="109"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="135"/>
            <end position="158"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000602"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00002096"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00010631"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012149"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ72962.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="271" mass="30168" checksum="49B8C62E521B68A4" modified="2015-12-09" version="1">MMLVDLRPLKRLLRLVAGLLSVPPGRGRIALAYIYGLACHTLFAAAVLAMIAAMFFGMSRSFGAVPDPWRYLANAVLLLQFPLTHSVLLSARGRKWLSALAPSGHGKTLATTTYAIIASLQLLLLFAFWTPSGVIWWQADGGVFWLLCGLYTLSWLLLIKASYDAGAEVQSGALGWMSLAQNIRPIFPDMPETGLFRIIRQPIYVSFALTTWTVPVWTPDQLAVASFLTAYCLFAPMLKERRFASQFGDRFLQYKAAVPYIFPNVTRRSKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFH0</accession>
    <name>A0A0M7AFH0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Alcohol dehydrogenase</fullName>
            <ecNumber evidence="4">1.1.1.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">adh</name>
        <name evidence="4" type="ORF">LAX5112_03442</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the zinc-containing alcohol dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.1" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73156.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672848.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03442"/>
    <dbReference type="EnsemblBacteria" id="CTQ73156">
        <property type="protein sequence ID" value="CTQ73156"/>
        <property type="gene ID" value="LAX5112_03442"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004022">
        <property type="term" value="F:alcohol dehydrogenase (NAD+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013149">
        <property type="entry name" value="ADH-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013154">
        <property type="entry name" value="ADH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002328">
        <property type="entry name" value="ADH_Zn_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011032">
        <property type="entry name" value="GroES-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020843">
        <property type="entry name" value="PKS_ER"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08240">
        <property type="entry name" value="ADH_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00107">
        <property type="entry name" value="ADH_zinc_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00829">
        <property type="entry name" value="PKS_ER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50129">
        <property type="entry name" value="SSF50129"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00059">
        <property type="entry name" value="ADH_ZINC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="1 4" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="PKS_ER" evidence="3">
        <location>
            <begin position="11"/>
            <end position="337"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU361277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ73156.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="339" mass="35514" checksum="73F402ED6817C0AC" modified="2015-12-09" version="1">MPKMKAAVVTGFGKPLEIREVEKPGAREGHVVVKIEASGVCHTDLHAAKGDWPVKPEPPFIPGHEGVGYVAEVGRGVTSVKEGDRVGVPWLHHACGHCNSCITGWETLCRTDPQYTGYTVNGGFAEYVEADPAYVGHIPDGVDFAPAAPILCAGVTVYKGLKECDLRPGKSVVISGVGGLGHLAVQYAKAMGLHVIAVDVADDKLKLASDLGAEVTVNARTQDPVEELTRLGGADGVLVTAVSNSAFAQAVGMLAPGGTMSLVGLPPGDFPLNIFDVVLNRKTIRGSIVGTRADLAESLAFAAEGKVASHYATETLDNINDIFGRMEQGKIDGRIVMTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AH84</accession>
    <name>A0A0M7AH84_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03427</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73113.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03427"/>
    <dbReference type="EnsemblBacteria" id="CTQ73113">
        <property type="protein sequence ID" value="CTQ73113"/>
        <property type="gene ID" value="LAX5112_03427"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.190.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042100">
        <property type="entry name" value="Bug_dom1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809653" evidence="1">
        <location>
            <begin position="29"/>
            <end position="368"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73113.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="368" mass="39582" checksum="1F8D7185D926A864" modified="2015-12-09" version="1">MVLKKLTQRLALSVAFATCALAPSQVLAEGLDLTGKTVEWVIPFSETGGSAKWANFYAPLLSEALPGQPTVVVKFMPGAGSTKGANWFQGQEYSDSDGTLIFGSSGSTQFPYLLGDPRVRYEYKDWNVVLASGTGGVAYLPPDLAEKMNGNDASALRETDFIYGSQGATRLDLVPLLAWEMLGLNVEPVFGIKGRGDGRLMFERGEANIDYQTSSSYLKGVTPLVEAGTAVPMMSWGALDDEGNIVRDPTFPDMPTFKEVCEATDGCETSGEKWDAWKAFFIAGFPAQKMVFLPNGASEDAINTYAKAFEAVKARGDFAEISAGRLGKYPQMTGAKADAALKSATEVPTSAKEFIVGWLQDRYGVSLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHA7</accession>
    <name>A0A0M7AHA7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Acetolactate synthase</fullName>
            <ecNumber evidence="6">2.2.1.6</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">alsS</name>
        <name evidence="6" type="ORF">LAX5112_03592</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the TPP enzyme family.</text>
    </comment>
    <dbReference type="EC" id="2.2.1.6" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73600.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672948.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03592"/>
    <dbReference type="EnsemblBacteria" id="CTQ73600">
        <property type="protein sequence ID" value="CTQ73600"/>
        <property type="gene ID" value="LAX5112_03592"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003984">
        <property type="term" value="F:acetolactate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030976">
        <property type="term" value="F:thiamine pyrophosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044281">
        <property type="term" value="P:small molecule metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029035">
        <property type="entry name" value="DHS-like_NAD/FAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029061">
        <property type="entry name" value="THDP-binding"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012000">
        <property type="entry name" value="Thiamin_PyroP_enz_cen_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012001">
        <property type="entry name" value="Thiamin_PyroP_enz_TPP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045229">
        <property type="entry name" value="TPP_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011766">
        <property type="entry name" value="TPP_enzyme-bd_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18968">
        <property type="entry name" value="PTHR18968"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02775">
        <property type="entry name" value="TPP_enzyme_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00205">
        <property type="entry name" value="TPP_enzyme_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02776">
        <property type="entry name" value="TPP_enzyme_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52467">
        <property type="entry name" value="SSF52467"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52518">
        <property type="entry name" value="SSF52518"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0786">Thiamine pyrophosphate</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="TPP_enzyme_N" evidence="5">
        <location>
            <begin position="3"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="domain" description="TPP_enzyme_M" evidence="3">
        <location>
            <begin position="190"/>
            <end position="299"/>
        </location>
    </feature>
    <feature type="domain" description="TPP_enzyme_C" evidence="4">
        <location>
            <begin position="381"/>
            <end position="526"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007812"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU362132"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00205"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF02775"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF02776"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ73600.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="538" mass="56787" checksum="ED68508F74B4FFF5" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHA9</accession>
    <name>A0A0M7AHA9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Precorrin-3B C(17)-methyltransferase</fullName>
            <ecNumber evidence="8">2.1.1.131</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">cobJ</name>
        <name evidence="8" type="ORF">LAX5112_03657</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Cofactor biosynthesis; adenosylcobalamin biosynthesis.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.131" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73786.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673000.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03657"/>
    <dbReference type="EnsemblBacteria" id="CTQ73786">
        <property type="protein sequence ID" value="CTQ73786"/>
        <property type="gene ID" value="LAX5112_03657"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00148"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030789">
        <property type="term" value="F:precorrin-3B C17-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009236">
        <property type="term" value="P:cobalamin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd11646">
        <property type="entry name" value="Precorrin_3B_C17_MT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.180">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.950.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1010.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000878">
        <property type="entry name" value="4pyrrol_Mease"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035996">
        <property type="entry name" value="4pyrrol_Methylase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014777">
        <property type="entry name" value="4pyrrole_Mease_sub1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014776">
        <property type="entry name" value="4pyrrole_Mease_sub2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021744">
        <property type="entry name" value="CbiG_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006363">
        <property type="entry name" value="Cbl_synth_CobJ/CibH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002750">
        <property type="entry name" value="CobE/GbiG_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036518">
        <property type="entry name" value="CobE/GbiG_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038029">
        <property type="entry name" value="GbiG_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01890">
        <property type="entry name" value="CbiG_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11760">
        <property type="entry name" value="CbiG_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00590">
        <property type="entry name" value="TP_methylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF159664">
        <property type="entry name" value="SSF159664"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF159672">
        <property type="entry name" value="SSF159672"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53790">
        <property type="entry name" value="SSF53790"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01466">
        <property type="entry name" value="cobJ_cbiH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 8" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="3 8" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="CbiG_N" evidence="7">
        <location>
            <begin position="50"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="domain" description="CbiG_C" evidence="6">
        <location>
            <begin position="210"/>
            <end position="328"/>
        </location>
    </feature>
    <feature type="domain" description="TP_methylase" evidence="5">
        <location>
            <begin position="347"/>
            <end position="562"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004953"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00590"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF01890"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF11760"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ73786.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="614" mass="64790" checksum="DD28629E725BD938" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="31" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHN4</accession>
    <name>A0A0M7AHN4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">3-isopropylmalate dehydratase large subunit</fullName>
            <ecNumber evidence="12">4.2.1.33</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="12">Alpha-IPM isomerase</fullName>
            <shortName evidence="12">IPMI</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="12">Isopropylmalate isomerase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="14" type="primary">leuC_1</name>
        <name evidence="12" type="synonym">leuC</name>
        <name evidence="14" type="ORF">LAX5112_03759</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2 12">Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 12">
            <text>(2R,3S)-3-isopropylmalate = (2S)-2-isopropylmalate</text>
            <dbReference type="Rhea" id="RHEA:32287"/>
            <dbReference type="ChEBI" id="CHEBI:1178"/>
            <dbReference type="ChEBI" id="CHEBI:35121"/>
            <dbReference type="EC" id="4.2.1.33"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="12">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
        <text evidence="12">Binds 1 [4Fe-4S] cluster per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="3 12">Amino-acid biosynthesis; L-leucine biosynthesis; L-leucine from 3-methyl-2-oxobutanoate: step 2/4.</text>
    </comment>
    <comment type="subunit">
        <text evidence="12">Heterodimer of LeuC and LeuD.</text>
    </comment>
    <comment type="similarity">
        <text evidence="12">Belongs to the aconitase/IPM isomerase family. LeuC type 1 subfamily.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.33" evidence="12"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74101.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673080.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03759"/>
    <dbReference type="EnsemblBacteria" id="CTQ74101">
        <property type="protein sequence ID" value="CTQ74101"/>
        <property type="gene ID" value="LAX5112_03759"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00048">
        <property type="reaction ID" value="UER00071"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003861">
        <property type="term" value="F:3-isopropylmalate dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009098">
        <property type="term" value="P:leucine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01583">
        <property type="entry name" value="IPMI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.499.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01026">
        <property type="entry name" value="LeuC_type1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004430">
        <property type="entry name" value="3-IsopropMal_deHydase_lsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015931">
        <property type="entry name" value="Acnase/IPM_dHydase_lsu_aba_1/3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001030">
        <property type="entry name" value="Acoase/IPM_deHydtase_lsu_aba"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018136">
        <property type="entry name" value="Aconitase_4Fe-4S_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036008">
        <property type="entry name" value="Aconitase_4Fe-4S_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033941">
        <property type="entry name" value="IPMI_cat"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00330">
        <property type="entry name" value="Aconitase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00415">
        <property type="entry name" value="ACONITASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53732">
        <property type="entry name" value="SSF53732"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00170">
        <property type="entry name" value="leuC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00450">
        <property type="entry name" value="ACONITASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01244">
        <property type="entry name" value="ACONITASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 12" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="6 12" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="11 12" id="KW-0100">Branched-chain amino acid biosynthesis</keyword>
    <keyword evidence="8 12" id="KW-0408">Iron</keyword>
    <keyword evidence="9 12" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="4 12" id="KW-0432">Leucine biosynthesis</keyword>
    <keyword evidence="10 12 14" id="KW-0456">Lyase</keyword>
    <keyword evidence="7 12" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aconitase" evidence="13">
        <location>
            <begin position="9"/>
            <end position="459"/>
        </location>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="349"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="409"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="412"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00002695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022430"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01026"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF00330"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="CTQ74101.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="470" mass="50736" checksum="9A3C05A90F1DFCFD" modified="2015-12-09" version="1">MAKARTLYDKIWDDHAVDMQPDGTGLLYIDRHLVHEVTSPQAFEGLRMTGRKVRQPGKTLAVVDHNVPTTDRRHGIDDPESALQVETLAKNAAEFGVEYYSELDMRQGVVHIVGPEQGFTLPGMTIVCGDSHTSTHGAFGSLAHGIGTSEVEHVLATQTLIQKKAKNMLVKVNGQIPAGVTAKDIVLAIIGKIGTAGGTGYVIEYAGEAIESLSIEGRMTVCNMSIEGGARAGLIAPDEKTFEYIKGRPKAPKGDDWDKALAYWKTLHTDADAYFDKVIELDAANLPPIVSWGSSPEDVVSVEGIVPDPQEIEDENRRQSKFRALDYMGLEPGTKITDIKIDRAFIGSCTNGRIEDLRAAAAVIGNHKVASHVSAMVVPGSGLVKEQAEEEGLDVIFKEAGFEWREPGCSMCLAMNADKLAPGERCASTSNRNFEGRQGHKGRTHLVSPAMAAAAAIAGHFVDIRDWTAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AI08</accession>
    <name>A0A0M7AI08_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">3-oxoadipate enol-lactonase 2</fullName>
            <ecNumber evidence="2">3.1.1.24</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">catD_1</name>
        <name evidence="2" type="ORF">LAX5112_03952</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.1.24" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74728.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673253.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03952"/>
    <dbReference type="EnsemblBacteria" id="CTQ74728">
        <property type="protein sequence ID" value="CTQ74728"/>
        <property type="gene ID" value="LAX5112_03952"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047570">
        <property type="term" value="F:3-oxoadipate enol-lactonase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042952">
        <property type="term" value="P:beta-ketoadipate pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000073">
        <property type="entry name" value="AB_hydrolase_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026968">
        <property type="entry name" value="PcaD/CatD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00561">
        <property type="entry name" value="Abhydrolase_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00111">
        <property type="entry name" value="ABHYDROLASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02427">
        <property type="entry name" value="protocat_pcaD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AB hydrolase-1" evidence="1">
        <location>
            <begin position="23"/>
            <end position="128"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00561"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74728.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="266" mass="28928" checksum="E9CB67AA117604E1" modified="2015-12-09" version="1">MRIARLTNADIHWREDGDPNGAPVVFANSLGTDLRLWDKVIDRLPEAGYRYIRFDKRGHGLSSCPSDAYSMTDLVIDLEELLDHIGVSQFSLVGLSIGGMIGQLLAHRQPDRMTRLILACTAAKMGTADMWQARITAVRKGGVESIADAVLDRWFSGPFRHSGECIAWRSMLSRTPAEGYIGCSEALAVTDLTATTSELTLPVLGLAGSEDLASPPAQVKATTDLIRGSRFVELAGAGHLPCVEQADVFTAHLQNFLKESAHVRQV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJ21</accession>
    <name>A0A0M7AJ21_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Esterase, PHB depolymerase family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03590</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73594.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03590"/>
    <dbReference type="EnsemblBacteria" id="CTQ73594">
        <property type="protein sequence ID" value="CTQ73594"/>
        <property type="gene ID" value="LAX5112_03590"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003140">
        <property type="entry name" value="PLipase/COase/thioEstase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02230">
        <property type="entry name" value="Abhydrolase_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809386" evidence="1">
        <location>
            <begin position="24"/>
            <end position="277"/>
        </location>
    </feature>
    <feature type="domain" description="Abhydrolase_2" evidence="2">
        <location>
            <begin position="126"/>
            <end position="193"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02230"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ73594.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="277" mass="30713" checksum="5AD7A07BE2310847" modified="2015-12-09" version="1">MTQKRKWVLGLAVAAAMSPPAFASETSCGGETPCTLSDGAYYVHVPEERDPSKPLGAILYLHGHRGKAVNALKNESFKRMADDLGVAFVAVQGVNGTWSFPTAPRNLRDEPVFFDSVLEDLSKRFGVDRERTMLTGFSSGGFMTWYLACEQSERFSGYAPIAGAFWEPLPKDCPTEPPYLFHVHGTTDTVVPLEGRWLGGGQWKQGDVFESFDIWRNQTGLSETAPETFTDGALSCERWKPVTGLLELCLHDGGHSVRAEWIERAWSLLSNMRGWES</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJK4</accession>
    <name>A0A0M7AJK4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">3-keto-5-aminohexanoate cleavage enzyme</fullName>
            <ecNumber evidence="1">2.-.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">kce_3</name>
        <name evidence="1" type="ORF">LAX5112_03956</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.-.-.-" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74741.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673257.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03956"/>
    <dbReference type="EnsemblBacteria" id="CTQ74741">
        <property type="protein sequence ID" value="CTQ74741"/>
        <property type="gene ID" value="LAX5112_03956"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019475">
        <property type="term" value="P:L-lysine catabolic process to acetate"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008567">
        <property type="entry name" value="KCE_family"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37418">
        <property type="entry name" value="PTHR37418"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05853">
        <property type="entry name" value="BKACE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ74741.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="278" mass="30585" checksum="30110D10F07D7EC3" modified="2015-12-09" version="1">MSKPCIICVAITGSLPTKENNPAVPVTVAEQVESTHEAFEAGATICHAHVRNEDQSPSSDPEKFARLKEGLEKHCPGMIIQFSTGGRSGAGKARGGMLPLKPDMASLSVGSNNFPTRVYENPPDLVDWLAAEMRTYTIKPEIEAFDLSHIHQAAAMNKDGRIPGRLYIQFVMGVKNAMPVDKDVFDYYIKTVERLVPDAEWCAAGIGRHQLTINEWSIAAGGHTRTGLEDNIRLDKDRLAPSNAALVKRAVELCEKYDRPVADWQKAREILRIPLKAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJM6</accession>
    <name>A0A0M7AJM6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Flagellar M-ring protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="primary">fliF_2</name>
        <name evidence="14" type="ORF">LAX5112_04204</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">The M ring may be actively involved in energy transduction.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 9">Bacterial flagellum basal body</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 9">Belongs to the FliF family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75365.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04204"/>
    <dbReference type="EnsemblBacteria" id="CTQ75365">
        <property type="protein sequence ID" value="CTQ75365"/>
        <property type="gene ID" value="LAX5112_04204"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009431">
        <property type="term" value="C:bacterial-type flagellum basal body, MS ring"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003774">
        <property type="term" value="F:cytoskeletal motor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071973">
        <property type="term" value="P:bacterial-type flagellum-dependent cell motility"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045851">
        <property type="entry name" value="AMP-bd_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013556">
        <property type="entry name" value="Flag_M-ring_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000067">
        <property type="entry name" value="FlgMring_FliF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006182">
        <property type="entry name" value="FliF_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043427">
        <property type="entry name" value="YscJ/FliF"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30046">
        <property type="entry name" value="PTHR30046"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30046:SF0">
        <property type="entry name" value="PTHR30046:SF0"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01514">
        <property type="entry name" value="YscJ_FliF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08345">
        <property type="entry name" value="YscJ_FliF_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004862">
        <property type="entry name" value="FliF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01009">
        <property type="entry name" value="FLGMRINGFLIF"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00206">
        <property type="entry name" value="fliF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 9" id="KW-0975">Bacterial flagellum</keyword>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="14" id="KW-0966">Cell projection</keyword>
    <keyword evidence="14" id="KW-0969">Cilium</keyword>
    <keyword evidence="14" id="KW-0282">Flagellum</keyword>
    <keyword evidence="7 11" id="KW-0472">Membrane</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 11" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 11" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="417"/>
            <end position="436"/>
        </location>
    </feature>
    <feature type="domain" description="YscJ_FliF" evidence="12">
        <location>
            <begin position="20"/>
            <end position="193"/>
        </location>
    </feature>
    <feature type="domain" description="YscJ_FliF_C" evidence="13">
        <location>
            <begin position="227"/>
            <end position="389"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="251"/>
            <end position="307"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007971"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023143"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRNR" id="PIRNR004862"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF01514"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF08345"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="CTQ75365.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="520" mass="56915" checksum="439DF8991E29BFD8" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AK72</accession>
    <name>A0A0M7AK72_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03999</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74842.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673291.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03999"/>
    <dbReference type="EnsemblBacteria" id="CTQ74842">
        <property type="protein sequence ID" value="CTQ74842"/>
        <property type="gene ID" value="LAX5112_03999"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011322">
        <property type="entry name" value="N-reg_PII-like_a/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015867">
        <property type="entry name" value="N-reg_PII/ATP_PRibTrfase_C"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54913">
        <property type="entry name" value="SSF54913"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74842.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="103" mass="11315" checksum="74AA5CE6FD72AB05" modified="2015-12-09" version="1">MEMKQAKRVEITIEAPMETRLTNALDRAGVTGYTILPVLGGSGRSGRWSREGQVSRAGGMVSIICIIRPERLDELLEAAFGVVERHIGVVCVSDCQVLRAERF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKA3</accession>
    <name>A0A0M7AKA3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Beta-glucuronidase</fullName>
            <ecNumber evidence="7">3.2.1.31</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">uidA</name>
        <name evidence="7" type="ORF">LAX5112_04283</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the glycosyl hydrolase 2 family.</text>
    </comment>
    <dbReference type="EC" id="3.2.1.31" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000022">
        <property type="protein sequence ID" value="CTQ75558.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673518.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000022.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04283"/>
    <dbReference type="EnsemblBacteria" id="CTQ75558">
        <property type="protein sequence ID" value="CTQ75558"/>
        <property type="gene ID" value="LAX5112_04283"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004566">
        <property type="term" value="F:beta-glucuronidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016052">
        <property type="term" value="P:carbohydrate catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036156">
        <property type="entry name" value="Beta-gal/glucu_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008979">
        <property type="entry name" value="Galactose-bd-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006101">
        <property type="entry name" value="Glyco_hydro_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023232">
        <property type="entry name" value="Glyco_hydro_2_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006103">
        <property type="entry name" value="Glyco_hydro_2_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006102">
        <property type="entry name" value="Glyco_hydro_2_Ig-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006104">
        <property type="entry name" value="Glyco_hydro_2_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013783">
        <property type="entry name" value="Ig-like_fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00703">
        <property type="entry name" value="Glyco_hydro_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02836">
        <property type="entry name" value="Glyco_hydro_2_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02837">
        <property type="entry name" value="Glyco_hydro_2_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00132">
        <property type="entry name" value="GLHYDRLASE2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49303">
        <property type="entry name" value="SSF49303"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49785">
        <property type="entry name" value="SSF49785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00608">
        <property type="entry name" value="GLYCOSYL_HYDROL_F2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 7" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="2 7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glyco_hydro_2_N" evidence="6">
        <location>
            <begin position="43"/>
            <end position="207"/>
        </location>
    </feature>
    <feature type="domain" description="Glyco_hydro_2" evidence="4">
        <location>
            <begin position="269"/>
            <end position="300"/>
        </location>
    </feature>
    <feature type="domain" description="Glyco_hydro_2_C" evidence="5">
        <location>
            <begin position="305"/>
            <end position="596"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007401"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00703"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF02836"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF02837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ75558.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="607" mass="69006" checksum="12E52B0BC26A8D9B" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKL0</accession>
    <name>A0A0M7AKL0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04070</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ74982.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74982">
        <property type="protein sequence ID" value="CTQ74982"/>
        <property type="gene ID" value="LAX5112_04070"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ74982.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="53" mass="6069" checksum="EB7A51B7408F04DF" modified="2015-12-09" version="1">MALIPIPVRSYLPVMLEKKRANVIVRATRIERFAEGRKTACGTEKTPLRRVEC</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKL8</accession>
    <name>A0A0M7AKL8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Teichoic acids export ATP-binding protein TagH</fullName>
            <ecNumber evidence="6">3.6.3.40</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">tagH</name>
        <name evidence="6" type="ORF">LAX5112_04228</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.40" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75429.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04228"/>
    <dbReference type="EnsemblBacteria" id="CTQ75429">
        <property type="protein sequence ID" value="CTQ75429"/>
        <property type="gene ID" value="LAX5112_04228"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd03220">
        <property type="entry name" value="ABC_KpsT_Wzt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd10147">
        <property type="entry name" value="Wzt_C-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015860">
        <property type="entry name" value="ABC_transpr_TagH-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029439">
        <property type="entry name" value="Wzt_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14524">
        <property type="entry name" value="Wzt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="25"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="62"/>
            <end position="69"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ75429.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="451" mass="49972" checksum="B164CF16C23C6B77" modified="2015-12-09" version="1">MSSDEVMLEISNLAKFYTIYERPEDRLKQMLWRGRKKYFREFWALSDVSFKVSKGETLGLLGRNGAGKSTLLQIVTGTLEASAGTVKRHGRIAALLELGAGFNPEFTGSENVYLAASILGLTEEEIEDRYEDIINFAGIGDFIGQPVKLYSSGMYARLAFAVAAHVDADILIIDEILSVGDAAFTQKCMRFINRFKEHGTILFVTHDIAAATKLCDRAVWLEGGRVKEIGPAKDVCRHYMAGINSANDEQGTFQISSRSGEAEKEEPEEIKPQVVVDPRDELLRNSEYANQIKVFDFDPGAEWSGHKGAEIVDVCVVDQEGTRKTVVYGGEVVTLRVTAKAINEIGMPIIGFYIKDRLGQNLFGDNTFLTLKDQDATIKPGKDMVANFTFQLPYLHAGDFSVTVAIAEGTEADHIQHHWIDDAMFLSVPTSHFSHGLMGVPMLDIKVESNR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKP0</accession>
    <name>A0A0M7AKP0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">NUDIX domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03971</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74780.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673311.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03971"/>
    <dbReference type="EnsemblBacteria" id="CTQ74780">
        <property type="protein sequence ID" value="CTQ74780"/>
        <property type="gene ID" value="LAX5112_03971"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015797">
        <property type="entry name" value="NUDIX_hydrolase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020084">
        <property type="entry name" value="NUDIX_hydrolase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000086">
        <property type="entry name" value="NUDIX_hydrolase_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00293">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55811">
        <property type="entry name" value="SSF55811"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51462">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00893">
        <property type="entry name" value="NUDIX_BOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nudix hydrolase" evidence="2">
        <location>
            <begin position="1"/>
            <end position="146"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51462"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ74780.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="158" mass="17892" checksum="21E958F7679C73BB" modified="2015-12-09" version="1">MKIFHKAYVYLTCGPELLVFEEADNPRPDLQVPGGTLDPGESYLQGAIREFSEETGLTLDIALESFADQDHFIDNVPGILDGLHRRRHFHGTIPEKPADEWEHFEMTPSAGGAPIRFRLFWVDLFSEEAPPETRFFEGFGAQLEALRSRMEGQINGSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="33" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AL13</accession>
    <name>A0A0M7AL13_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Queuine tRNA-ribosyltransferase</fullName>
            <ecNumber evidence="4">2.4.2.29</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">Guanine insertion enzyme</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="4">tRNA-guanine transglycosylase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="4 6" type="primary">tgt</name>
        <name evidence="6" type="ORF">LAX5112_04031</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2-cyclopenten-1-yl)amino)methyl)-7-deazaguanosine).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>7-aminomethyl-7-carbaguanine + guanosine(34) in tRNA = 7-aminomethyl-7-carbaguanosine(34) in tRNA + guanine</text>
            <dbReference type="Rhea" id="RHEA:24104"/>
            <dbReference type="Rhea" id="RHEA-COMP:10341"/>
            <dbReference type="Rhea" id="RHEA-COMP:10342"/>
            <dbReference type="ChEBI" id="CHEBI:16235"/>
            <dbReference type="ChEBI" id="CHEBI:58703"/>
            <dbReference type="ChEBI" id="CHEBI:74269"/>
            <dbReference type="ChEBI" id="CHEBI:82833"/>
            <dbReference type="EC" id="2.4.2.29"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="4">tRNA modification; tRNA-queuosine biosynthesis.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Homodimer. Within each dimer, one monomer is responsible for RNA recognition and catalysis, while the other monomer binds to the replacement base PreQ1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the queuine tRNA-ribosyltransferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.4.2.29" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ74910.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673322.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04031"/>
    <dbReference type="EnsemblBacteria" id="CTQ74910">
        <property type="protein sequence ID" value="CTQ74910"/>
        <property type="gene ID" value="LAX5112_04031"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00392"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008479">
        <property type="term" value="F:queuine tRNA-ribosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008616">
        <property type="term" value="P:queuosine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0101030">
        <property type="term" value="P:tRNA-guanine transglycosylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.105">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00168">
        <property type="entry name" value="Q_tRNA_Tgt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004803">
        <property type="entry name" value="TGT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036511">
        <property type="entry name" value="TGT-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002616">
        <property type="entry name" value="tRNA_ribo_trans-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01702">
        <property type="entry name" value="TGT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51713">
        <property type="entry name" value="SSF51713"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00430">
        <property type="entry name" value="Q_tRNA_tgt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00449">
        <property type="entry name" value="tgt_general"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 4 6" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="4" id="KW-0671">Queuosine biosynthesis</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4 6" id="KW-0808">Transferase</keyword>
    <keyword evidence="3 4" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="TGT" evidence="5">
        <location>
            <begin position="18"/>
            <end position="374"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="4">
        <location>
            <begin position="95"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="region of interest" description="RNA binding" evidence="4">
        <location>
            <begin position="254"/>
            <end position="260"/>
        </location>
    </feature>
    <feature type="region of interest" description="RNA binding; important for wobble base 34 recognition" evidence="4">
        <location>
            <begin position="278"/>
            <end position="282"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="4">
        <location>
            <position position="95"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="4">
        <location>
            <position position="273"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="149"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="196"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="223"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00168"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF01702"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ74910.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="382" mass="42845" checksum="F50868F1B038FF5D" modified="2015-12-09" version="1">MTETKKFGFKLITTDGMARRGEINTPHGVVHTPAFMPVGTQATVKAMFTDHVRETGADVVLGNTYHLMLRPTAERVDRLGGLHKFMNWPHTILTDSGGFQVMSLAQLRKLDEDGVRFQSHIDGSKHHLTPERSVEIQGLLGSDIQMQLDECIKLPSPREEVQRAMELSLRWAERSRTQFEKMRGPGKGQGLYGIVQGGDVPELRIRSAEELAKLPMEGYSVGGLAVGEPQEVMLKMLDITTPVMPVDKPRYLMGVGTPDDLLESVKRGIDQFDCVMPTRAGRHGLAYTRFGKVNLKNARHQDDPRPLDEESACPATSTYSRAYLHHLFRAGEALSGMLLTWNNIAYYQTLMQGMRDAIEESRFEEFYAKTKEDWARGDIAAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AL47</accession>
    <name>A0A0M7AL47_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative acetyltransferase, GNAT superfamily</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04119</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75126.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673384.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04119"/>
    <dbReference type="EnsemblBacteria" id="CTQ75126">
        <property type="protein sequence ID" value="CTQ75126"/>
        <property type="gene ID" value="LAX5112_04119"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016890">
        <property type="entry name" value="UCP028520"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF028520">
        <property type="entry name" value="UCP028520"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="9"/>
            <end position="166"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75126.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="171" mass="18783" checksum="D4FC1E19C2855726" modified="2015-12-09" version="1">MTTTSNPTANVRPFRPGDLSCLLPLNNAAVPAVNELSAEELLDLIGQSLVCLVAEIDEEPVGFLLSISDGADYASANYRWLSKNVSNFSYTDRICVDETRRGLKIGEKLYKALFDHLKDTGRSFVCEVNSRPPNPGSLRFHQRLGFEEIGTADHGEKAVVFLRKDPLGAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AL62</accession>
    <name>A0A0M7AL62_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">UvrABC system protein A</fullName>
            <shortName evidence="13">UvrA protein</shortName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="13">Excinuclease ABC subunit A</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="13 16" type="primary">uvrA</name>
        <name evidence="16" type="ORF">LAX5112_04058</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="17" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="13">The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.</text>
    </comment>
    <comment type="subunit">
        <text evidence="13">Forms a heterotetramer with UvrB during the search for lesions.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="13">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="13">Belongs to the ABC transporter superfamily. UvrA family.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ74960.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673343.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04058"/>
    <dbReference type="EnsemblBacteria" id="CTQ74960">
        <property type="protein sequence ID" value="CTQ74960"/>
        <property type="gene ID" value="LAX5112_04058"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009380">
        <property type="term" value="C:excinuclease repair complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009381">
        <property type="term" value="F:excinuclease ABC activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006289">
        <property type="term" value="P:nucleotide-excision repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009432">
        <property type="term" value="P:SOS response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00205">
        <property type="entry name" value="UvrA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004602">
        <property type="entry name" value="UvrA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041552">
        <property type="entry name" value="UvrA_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041102">
        <property type="entry name" value="UvrA_inter"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17755">
        <property type="entry name" value="UvrA_DNA-bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17760">
        <property type="entry name" value="UvrA_inter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00630">
        <property type="entry name" value="uvra"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 13 14" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 13" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 13" id="KW-0227">DNA damage</keyword>
    <keyword evidence="6 13" id="KW-0228">DNA excision</keyword>
    <keyword evidence="12 13" id="KW-0234">DNA repair</keyword>
    <keyword evidence="11 13" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="10 13" id="KW-0267">Excision nuclease</keyword>
    <keyword evidence="2 13" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4 13 14" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 13" id="KW-0677">Repeat</keyword>
    <keyword evidence="13" id="KW-0742">SOS response</keyword>
    <keyword evidence="8 13" id="KW-0862">Zinc</keyword>
    <keyword evidence="7 13" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="ABC transporter" evidence="15">
        <location>
            <begin position="626"/>
            <end position="960"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="C4-type" evidence="13">
        <location>
            <begin position="763"/>
            <end position="789"/>
        </location>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <begin position="47"/>
            <end position="54"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13 14">
        <location>
            <begin position="664"/>
            <end position="671"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022769"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022881"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00205"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="CTQ74960.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="975" mass="107354" checksum="5986ACFB8ECC5AD5" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALC7</accession>
    <name>A0A0M7ALC7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Spore cortex-lytic enzyme</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04411</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75925.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75925">
        <property type="protein sequence ID" value="CTQ75925"/>
        <property type="gene ID" value="LAX5112_04411"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.101.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009045">
        <property type="entry name" value="Hedgehog_sig/DD-Pept_Zn-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002477">
        <property type="entry name" value="Peptidoglycan-bd-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036365">
        <property type="entry name" value="PGBD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036366">
        <property type="entry name" value="PGBDSf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01471">
        <property type="entry name" value="PG_binding_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47090">
        <property type="entry name" value="SSF47090"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55166">
        <property type="entry name" value="SSF55166"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PG_binding_1" evidence="1">
        <location>
            <begin position="5"/>
            <end position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75925.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="238" mass="27379" checksum="FE77A0DC6D6332E4" modified="2015-12-09" version="1">MSFKKWLQSRLTSHGFACGGIDGEIGPVTLYALRSFQKANNLPVTGQADKATVEALRRTSSSVAFEEKGFIPDRDKQEPDDGRKGYWPRQKDVAAFYGDVGTRQTQIEVPWTMRLAWDKNVRIRKMTLHEEVAPSAVRVFEKLRGMYSDREIKALGLDLFGGSLNVRRMRGGSRYSMHSWGIAIDFDPERNRLSWKRPQARLSLDDVIPYWQAWEAEGWLSLGRVRNFDWMHVQAARL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALW3</accession>
    <name>A0A0M7ALW3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04472</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ76115.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76115">
        <property type="protein sequence ID" value="CTQ76115"/>
        <property type="gene ID" value="LAX5112_04472"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="27"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76115.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="33" mass="3746" checksum="9342EDBB99BC1864" modified="2015-12-09" version="1">MLIGDPVDTFMNLGTFAFIGFLAWVLMRKTPKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AM07</accession>
    <name>A0A0M7AM07_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Post-segregation antitoxin (Ccd killing mechanism protein) encoded by the F plasmid</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04249</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75472.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673483.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000021.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75472">
        <property type="protein sequence ID" value="CTQ75472"/>
        <property type="gene ID" value="LAX5112_04249"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009956">
        <property type="entry name" value="Post-segregation_anti-tox_CcdA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07362">
        <property type="entry name" value="CcdA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-1277">Toxin-antitoxin system</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022649"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75472.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="77" mass="8430" checksum="0CE7B7E045CE5C0F" modified="2015-12-09" version="1">MASHPARNPTDLTIDPVLVQSAKQLGINISQAAEKGIRSAVSRSMADQWRQENQSALKSSNKFVEEHGLPLAKSQLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMJ6</accession>
    <name>A0A0M7AMJ6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Sporulation initiation inhibitor protein soj</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">soj_2</name>
        <name evidence="2" type="ORF">LAX5112_04238</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75450.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04238"/>
    <dbReference type="EnsemblBacteria" id="CTQ75450">
        <property type="protein sequence ID" value="CTQ75450"/>
        <property type="gene ID" value="LAX5112_04238"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025669">
        <property type="entry name" value="AAA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017818">
        <property type="entry name" value="Plasmid_partition_RepA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13614">
        <property type="entry name" value="AAA_31"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03453">
        <property type="entry name" value="partition_RepA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA_31" evidence="1">
        <location>
            <begin position="115"/>
            <end position="292"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75450.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="405" mass="44386" checksum="2DB5EF7D0510B9A5" modified="2015-12-09" version="1">MMAADQQIAKDAEQLSVQLGELRARLFPPSSLKVMRSFTSGEAAKLIGVSDGYLRQLALSGDGPSPATDDRGRRSYTLADINALRSHLASQHEPGSTKARSYVRHRDPERGEHCQVIAVTNFKGGSGKTTTSTHLAQYLAIRGYRVLAVDLDPQASLSSLFGYQPELDLTGNDTIYGAIRYDAERVPLDQVIRKTYVDGLDLVPGNLELQEFEHTTPQYLASRPAGSDPQELFFARVQTALKSVEDNYDVVVLDCPPQLGYLTLGALCAASSVIVTVHPQMLDVASMSQFLFMTSDLLSVVREAGGTLNFDFLRYLVTRYEPQDGPQTQIAGFLRAQFGERVLTAPMVKSTAISDAGLTKQTLYEVGRENFTRATYDRAMESLTAVNSEIETLMLTAWGRAEAGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AN04</accession>
    <name>A0A0M7AN04_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Putative ketoacyl reductase</fullName>
            <ecNumber evidence="1">1.3.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">actIII</name>
        <name evidence="1" type="ORF">LAX5112_04301</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.3.1.-" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000022">
        <property type="protein sequence ID" value="CTQ75610.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673531.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000022.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04301"/>
    <dbReference type="EnsemblBacteria" id="CTQ75610">
        <property type="protein sequence ID" value="CTQ75610"/>
        <property type="gene ID" value="LAX5112_04301"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ75610.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="247" mass="25650" checksum="313DC3851E738D03" modified="2015-12-09" version="1">MRLAGKHVIVTGGGSGAGAEIAHAFETAGAKVTIMGRNAEKLETQNLPYQVCDVSDPAAIKPAFDAARQEQGPISVVVANAGATESVPFAKMSPEAFNANLAVNLTGVAFSFQAALSDMMNAGWGRMIAIASTAGLKGYPYVSGYCAAKHGVVGLTRSLSVELARTGITVNAICPGFLETPMLERSIDNIVKKTSMEREAAAGTLRKINPQNRFVQPREVAESALWLCSDGAASVNGHALSLSGGEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AN63</accession>
    <name>A0A0M7AN63_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Carnitine catabolism transcriptional activator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">cdhR_8</name>
        <name evidence="2" type="ORF">LAX5112_04319</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000022">
        <property type="protein sequence ID" value="CTQ75660.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75660">
        <property type="protein sequence ID" value="CTQ75660"/>
        <property type="gene ID" value="LAX5112_04319"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002818">
        <property type="entry name" value="DJ-1/PfpI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01965">
        <property type="entry name" value="DJ-1_PfpI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="SSF52317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="1">
        <location>
            <begin position="221"/>
            <end position="317"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75660.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="317" mass="35296" checksum="CA02C659792EE7DE" modified="2015-12-09" version="1">MQILIKTKDEKVSQGRSICVLLFDNFSNHCLANAVEPFRAANTIARKELYSWQHVSVEGGTVTSSSGLPVETLKWQQAPPGGDYLFVMPSYGFKAFSTPKLHQILRAARARFKLIGGLDTGAWMLAAAGVLEDARVTIHWDEFAGFSETFPDVDVVEDRFVLEDRIATCGGASTTFELMLEIIKKDHSPLFALEVAALFMHGSAGERPDLLPVRSGDGLMREATALMRRNIETPLAIPTVAGRLKVDQRLLETRFRSEFGMTPLAVYKSIRLREARRLVQSTDLNIAEIAVRCGYQNASAMTRAYRLEFGSPPRQER</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AN69</accession>
    <name>A0A0M7AN69_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">5-deoxy-glucuronate isomerase</fullName>
            <ecNumber evidence="2">5.3.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">iolB</name>
        <name evidence="2" type="ORF">LAX5112_04565</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="5.3.1.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000026">
        <property type="protein sequence ID" value="CTQ76349.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673759.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000026.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04565"/>
    <dbReference type="EnsemblBacteria" id="CTQ76349">
        <property type="protein sequence ID" value="CTQ76349"/>
        <property type="gene ID" value="LAX5112_04565"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008880">
        <property type="term" value="F:glucuronate isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019310">
        <property type="term" value="P:inositol catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024203">
        <property type="entry name" value="Deoxy-glucuronate_isom_IolB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021120">
        <property type="entry name" value="KduI/IolB_isomerase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR39193">
        <property type="entry name" value="PTHR39193"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04962">
        <property type="entry name" value="KduI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF036628">
        <property type="entry name" value="IolB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 2" id="KW-0413">Isomerase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76349.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="280" mass="31473" checksum="9527C989F2C10F3C" modified="2015-12-09" version="1">MHIAPHDNQNKPIVDIDNPTVPLNYFNIVKLQKGEAFHYQVPGYETCIVPATGTVTVEVEGLTFDKLGNRGEDVWDGEPEGVYIPVGAKVTIICTSDETETFIAGAKYDKVLEPFDVRVDGIDLVQYGSDDTKTHRKIKHILGQKQHGKVGRLLVSELFTVGQGGWSGFPAHKHDTDRLPHETRHDETYNFRFRPKHGSGVQILQREEGVPGEAYQLMDGSTFMIDKGYHPCAVMPGYEMYYFTILGGLSQRSLVQYFQPTHAYQIETIPGIKDMVAKFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AN83</accession>
    <name>A0A0M7AN83_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Tripartite tricarboxylate transporter TctA family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04643</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000027">
        <property type="protein sequence ID" value="CTQ76585.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673826.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000027.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04643"/>
    <dbReference type="EnsemblBacteria" id="CTQ76585">
        <property type="protein sequence ID" value="CTQ76585"/>
        <property type="gene ID" value="LAX5112_04643"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002823">
        <property type="entry name" value="DUF112_TM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009936">
        <property type="entry name" value="DUF1468"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01970">
        <property type="entry name" value="TctA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07331">
        <property type="entry name" value="TctB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="55"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="102"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="132"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="160"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="193"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="254"/>
            <end position="275"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="350"/>
            <end position="377"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="383"/>
            <end position="403"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="410"/>
            <end position="428"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="469"/>
            <end position="486"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="512"/>
            <end position="530"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="542"/>
            <end position="564"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="585"/>
            <end position="612"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="624"/>
            <end position="646"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76585.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="651" mass="67298" checksum="736B1D4986C660B4" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANQ9</accession>
    <name>A0A0M7ANQ9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 5">dTDP-glucose 4,6-dehydratase</fullName>
            <ecNumber evidence="4 5">4.2.1.46</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">rffG</name>
        <name evidence="7" type="ORF">LAX5112_04225</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 5">
            <text>dTDP-alpha-D-glucose = dTDP-4-dehydro-6-deoxy-alpha-D-glucose + H2O</text>
            <dbReference type="Rhea" id="RHEA:17221"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:57477"/>
            <dbReference type="ChEBI" id="CHEBI:57649"/>
            <dbReference type="EC" id="4.2.1.46"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 5">
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="3 5">Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.46" evidence="4 5"/>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75423.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673462.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000021.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04225"/>
    <dbReference type="EnsemblBacteria" id="CTQ75423">
        <property type="protein sequence ID" value="CTQ75423"/>
        <property type="gene ID" value="LAX5112_04225"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008460">
        <property type="term" value="F:dTDP-glucose 4,6-dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009225">
        <property type="term" value="P:nucleotide-sugar metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd05246">
        <property type="entry name" value="dTDP_GD_SDR_e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005888">
        <property type="entry name" value="dTDP_Gluc_deHydtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016040">
        <property type="entry name" value="NAD(P)-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16363">
        <property type="entry name" value="GDP_Man_Dehyd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01181">
        <property type="entry name" value="dTDP_gluc_dehyt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 7" id="KW-0456">Lyase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NAD(P)-bd_dom" evidence="6">
        <location>
            <begin position="5"/>
            <end position="322"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001539"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001911"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008178"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011990"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU004473"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF16363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ75423.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="350" mass="39106" checksum="01E6CDC1974E705C" modified="2015-12-09" version="1">MTRVIVTGGAGFIGSAVVRHLVRNVGAEVLTIDKLTYAGNLDSLREVDNAPNHKFLKEDICAGPEMIQAVAEFQPDYIMHLAAESHVDRSITGAAEFVQTNVVGTMAMLEAARAYWNSLEGEKKDSFRFLHVSTDEVYGSLGDDGLFKETTPYDPSSPYSASKAASDHLAIAWHRTYGLPVVLSNCSNNYGPYHFPEKLIPLMILNALDGKPLPIYGTGMNVRDWLYVDDHAKALYTIVSKGRLGEKYNVGGRNERTNLEVVKTICAILDKHSPKTAPHDRLITYVEDRPGHDARYAIDATKLETELGWRAEENFDTGIEKTIKWYLENDWWWGPLRNKVYSGTRLGLVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANU1</accession>
    <name>A0A0M7ANU1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Site-specific recombinase XerD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_04398</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75890.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75890">
        <property type="protein sequence ID" value="CTQ75890"/>
        <property type="gene ID" value="LAX5112_04398"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.130">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.443.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011010">
        <property type="entry name" value="DNA_brk_join_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013762">
        <property type="entry name" value="Integrase-like_cat_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002104">
        <property type="entry name" value="Integrase_catalytic"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010998">
        <property type="entry name" value="Integrase_recombinase_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00589">
        <property type="entry name" value="Phage_integrase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56349">
        <property type="entry name" value="SSF56349"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51898">
        <property type="entry name" value="TYR_RECOMBINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tyr recombinase" evidence="3">
        <location>
            <begin position="166"/>
            <end position="343"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ75890.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="350" mass="39607" checksum="201989BF90101560" modified="2015-12-09" version="1">MAAMPKRRLPHLRREKSRHGRVKWFFRLGDGPRIRLPDEYDLDPGSEFMKAYHVALTGSDAPEKPRSRYPQNTLGWLLDQYEQSAKFAALATATRQSYGYQIKAIKGKSGSVRLIDITERSIRRAREARASTPNAANAFLKVMKVAFAWGMESGLLDDVINRDPAKEVKRIDIKTEGHHTWTIEEIERYEARWALGTMERLALDLLACTGLRREDVYQIGRQHIKGGEIHVRTSKTGGWIYLPVLPALQDSIDATKTGELTLLLNTKGQPHLNGKAFGKWFGKACERAKVPGRAHGMRKAAATLAAERGATVHQMMAIFGWDSERMAIHYTRKANRKKIGLEHGELLDRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANU9</accession>
    <name>A0A0M7ANU9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">RNA polymerase sigma factor RpoD</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Sigma-70</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="primary">sigA</name>
        <name evidence="6" type="synonym">rpoD</name>
        <name evidence="11" type="ORF">LAX5112_04711</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Interacts transiently with the RNA polymerase catalytic core.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the sigma-70 factor family. RpoD/SigA subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000029">
        <property type="protein sequence ID" value="CTQ76808.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673890.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000029.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04711"/>
    <dbReference type="EnsemblBacteria" id="CTQ76808">
        <property type="protein sequence ID" value="CTQ76808"/>
        <property type="gene ID" value="LAX5112_04711"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016987">
        <property type="term" value="F:sigma factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006352">
        <property type="term" value="P:DNA-templated transcription, initiation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.220.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00963">
        <property type="entry name" value="Sigma70_RpoD_SigA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014284">
        <property type="entry name" value="RNA_pol_sigma-70_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000943">
        <property type="entry name" value="RNA_pol_sigma70"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009042">
        <property type="entry name" value="RNA_pol_sigma70_r1_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007627">
        <property type="entry name" value="RNA_pol_sigma70_r2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007624">
        <property type="entry name" value="RNA_pol_sigma70_r3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007630">
        <property type="entry name" value="RNA_pol_sigma70_r4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007631">
        <property type="entry name" value="RNA_pol_sigma_70_non-ess"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007127">
        <property type="entry name" value="RNA_pol_sigma_70_r1_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042189">
        <property type="entry name" value="RNA_pol_sigma_70_r1_1_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013325">
        <property type="entry name" value="RNA_pol_sigma_r2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013324">
        <property type="entry name" value="RNA_pol_sigma_r3/r4-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012760">
        <property type="entry name" value="RNA_pol_sigma_RpoD_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028630">
        <property type="entry name" value="Sigma70_RpoD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04546">
        <property type="entry name" value="Sigma70_ner"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03979">
        <property type="entry name" value="Sigma70_r1_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00140">
        <property type="entry name" value="Sigma70_r1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04542">
        <property type="entry name" value="Sigma70_r2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04539">
        <property type="entry name" value="Sigma70_r3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04545">
        <property type="entry name" value="Sigma70_r4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00046">
        <property type="entry name" value="SIGMA70FCT"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88659">
        <property type="entry name" value="SSF88659"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88946">
        <property type="entry name" value="SSF88946"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02393">
        <property type="entry name" value="RpoD_Cterm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02937">
        <property type="entry name" value="sigma70-ECF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00715">
        <property type="entry name" value="SIGMA70_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00716">
        <property type="entry name" value="SIGMA70_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="1 6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0731">Sigma factor</keyword>
    <keyword evidence="5 6" id="KW-0804">Transcription</keyword>
    <keyword evidence="2 6" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="RNA_pol_sigma70" evidence="9">
        <location>
            <begin position="457"/>
            <end position="470"/>
        </location>
    </feature>
    <feature type="domain" description="RNA_pol_sigma70" evidence="10">
        <location>
            <begin position="626"/>
            <end position="652"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="6">
        <location>
            <begin position="627"/>
            <end position="646"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="191"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="region of interest" description="Sigma-70 factor domain-2" evidence="6">
        <location>
            <begin position="433"/>
            <end position="503"/>
        </location>
    </feature>
    <feature type="region of interest" description="Sigma-70 factor domain-3" evidence="6">
        <location>
            <begin position="512"/>
            <end position="588"/>
        </location>
    </feature>
    <feature type="region of interest" description="Sigma-70 factor domain-4" evidence="6">
        <location>
            <begin position="601"/>
            <end position="654"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="7">
        <location>
            <begin position="384"/>
            <end position="439"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="Interaction with polymerase core subunit RpoC" evidence="6">
        <location>
            <begin position="457"/>
            <end position="460"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="8">
        <location>
            <begin position="226"/>
            <end position="244"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023082"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00963"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS00715"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS00716"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ76808.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="667" mass="75585" checksum="20E6ED9DA3D8B892" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APF3</accession>
    <name>A0A0M7APF3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Transcriptional regulatory protein OmpR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">ompR_3</name>
        <name evidence="6" type="ORF">LAX5112_04626</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000027">
        <property type="protein sequence ID" value="CTQ76537.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04626"/>
    <dbReference type="EnsemblBacteria" id="CTQ76537">
        <property type="protein sequence ID" value="CTQ76537"/>
        <property type="gene ID" value="LAX5112_04626"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00383">
        <property type="entry name" value="trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001867">
        <property type="entry name" value="OmpR/PhoB-type_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016032">
        <property type="entry name" value="Sig_transdc_resp-reg_C-effctor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039420">
        <property type="entry name" value="WalR-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48111">
        <property type="entry name" value="PTHR48111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00486">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00862">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46894">
        <property type="entry name" value="SSF46894"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51755">
        <property type="entry name" value="OMPR_PHOB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="4">
        <location>
            <begin position="36"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="domain" description="OmpR/PhoB-type" evidence="5">
        <location>
            <begin position="160"/>
            <end position="260"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="OmpR/PhoB-type" evidence="3">
        <location>
            <begin position="160"/>
            <end position="260"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="2">
        <location>
            <position position="85"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ76537.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="267" mass="30115" checksum="F2005AEFEAE448E5" modified="2015-12-09" version="1">MRRYLSICVKLCICVILLAQLMSLSHNKRMQSDTSKILIVDDDPDIREMLSELLEEEGFRTQSVSDPVSIDTAIAQFEPDLILLDLMLPTESGLTICQRLRTKIATPIIMVTAKASEIDRVVGLEIGADDYITKPFSKRELIARVRAVLRRGAHELAVQPSMFAFKDLLIDLDSRTLKTLAGELIPLTSAEFDLLACFVGAPQKVLSRDHLLRTVLRRKSDLFDRSVDTLVSRLRKKIERPEDDEKLIATIRQQGYLFTPKVQPAAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APM2</accession>
    <name>A0A0M7APM2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Neu5Ac-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">siaP_2</name>
        <name evidence="4" type="ORF">LAX5112_04576</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the bacterial solute-binding protein 7 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000026">
        <property type="protein sequence ID" value="CTQ76382.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673768.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000026.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04576"/>
    <dbReference type="EnsemblBacteria" id="CTQ76382">
        <property type="protein sequence ID" value="CTQ76382"/>
        <property type="gene ID" value="LAX5112_04576"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030288">
        <property type="term" value="C:outer membrane-bounded periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071702">
        <property type="term" value="P:organic substance transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.190.170">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018389">
        <property type="entry name" value="DctP_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004682">
        <property type="entry name" value="TRAP_DctP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038404">
        <property type="entry name" value="TRAP_DctP_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33376">
        <property type="entry name" value="PTHR33376"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03480">
        <property type="entry name" value="DctP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006470">
        <property type="entry name" value="DctB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00787">
        <property type="entry name" value="dctP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809517" evidence="3">
        <location>
            <begin position="27"/>
            <end position="337"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ76382.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="337" mass="37061" checksum="FF83F993E452A843" modified="2015-12-09" version="1">MLEKKFLSRLMAGVAVAAVGLSSAHAAEKLRFSHTDNPGGSRQAAAELFAEKVAEYTDGRYEVQIYPSGQLANDPKAIELLQLGGIDFTVSATGSYATHLPSLNLTAMPFLVDTYEQGWELYDNSEWLQGEFQKLPEKGFRVLSTWEAGFRSFTTNEPLTSPKDAESMKMRVFPNDMIRWSMEAIGFQTVVMPITDVYLAIQQGIVNGQENPVDTIRSLRFYEVAPNITLTRHVYSPLPLTVAEKTWQSFSEEDQAAVLNAATESATFSRQLVQSSVDSQLTEMQEAGAVVSVPEIGPFREAVQSVYAKAKDVYGTEAVDNILGDAAVIREALPAQN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APR7</accession>
    <name>A0A0M7APR7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">1,2-epoxyphenylacetyl-CoA isomerase</fullName>
            <ecNumber evidence="3">5.3.3.18</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">paaG_3</name>
        <name evidence="3" type="ORF">LAX5112_04299</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the enoyl-CoA hydratase/isomerase family.</text>
    </comment>
    <dbReference type="EC" id="5.3.3.18" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000022">
        <property type="protein sequence ID" value="CTQ75604.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673529.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000022.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04299"/>
    <dbReference type="EnsemblBacteria" id="CTQ75604">
        <property type="protein sequence ID" value="CTQ75604"/>
        <property type="gene ID" value="LAX5112_04299"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.12.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029045">
        <property type="entry name" value="ClpP/crotonase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018376">
        <property type="entry name" value="Enoyl-CoA_hyd/isom_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001753">
        <property type="entry name" value="Enoyl-CoA_hydra/iso"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014748">
        <property type="entry name" value="Enoyl-CoA_hydra_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00378">
        <property type="entry name" value="ECH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52096">
        <property type="entry name" value="SSF52096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00166">
        <property type="entry name" value="ENOYL_COA_HYDRATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0413">Isomerase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005254"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU003707"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ75604.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="266" mass="28926" checksum="BE01A9D6E4D0B976" modified="2015-12-09" version="1">MTDAPKHFNLSVDGGIARVSLNRPERKNPLTFESYAELRDWFRDLVYRDDIHAVVFLPNGGNFSSGGDVHDIIGPLTRMSMKELLAFTRMTGDLVKAIVNCGKPVIAAIDGVCVGAGAIIAMASDLRFATPDAKTAFLFTRVGLAGCDMGACAILPRIIGQGRAAELLYTGRSMSADEGERWGFFNRLVDANSLENEAVTFAEGIVAGPNFAHMMTKTMLAQEWSMSIEQAIEAEAQAQAICMQTGDFERAYNAFVNKEKPVFEGN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQC4</accession>
    <name>A0A0M7AQC4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Dipeptide-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">dppA_4</name>
        <name evidence="6" type="ORF">LAX5112_04805</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the bacterial solute-binding protein 5 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000031">
        <property type="protein sequence ID" value="CTQ77109.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673964.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000031.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04805"/>
    <dbReference type="EnsemblBacteria" id="CTQ77109">
        <property type="protein sequence ID" value="CTQ77109"/>
        <property type="gene ID" value="LAX5112_04805"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030288">
        <property type="term" value="C:outer membrane-bounded periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030678">
        <property type="entry name" value="Peptide/Ni-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039424">
        <property type="entry name" value="SBP_5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000914">
        <property type="entry name" value="SBP_5_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30290">
        <property type="entry name" value="PTHR30290"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00496">
        <property type="entry name" value="SBP_bac_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002741">
        <property type="entry name" value="MppA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0574">Periplasm</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809523" evidence="4">
        <location>
            <begin position="24"/>
            <end position="527"/>
        </location>
    </feature>
    <feature type="domain" description="SBP_bac_5" evidence="5">
        <location>
            <begin position="66"/>
            <end position="441"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ77109.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="527" mass="58589" checksum="F8B304E333AC7376" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AR70</accession>
    <name>A0A0M7AR70_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Ribonuclease PH</fullName>
            <shortName evidence="4">RNase PH</shortName>
            <ecNumber evidence="4">2.7.7.56</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">tRNA nucleotidyltransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="4 7" type="primary">rph</name>
        <name evidence="7" type="ORF">LAX5112_04819</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>phosphate + tRNA(n+1) = a ribonucleoside 5'-diphosphate + tRNA(n)</text>
            <dbReference type="Rhea" id="RHEA:10628"/>
            <dbReference type="Rhea" id="RHEA-COMP:17343"/>
            <dbReference type="Rhea" id="RHEA-COMP:17344"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57930"/>
            <dbReference type="ChEBI" id="CHEBI:173114"/>
            <dbReference type="EC" id="2.7.7.56"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="4">Homohexameric ring arranged as a trimer of dimers.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the RNase PH family.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.56" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000031">
        <property type="protein sequence ID" value="CTQ77147.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04819"/>
    <dbReference type="EnsemblBacteria" id="CTQ77147">
        <property type="protein sequence ID" value="CTQ77147"/>
        <property type="gene ID" value="LAX5112_04819"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000175">
        <property type="term" value="F:3'-5'-exoribonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009022">
        <property type="term" value="F:tRNA nucleotidyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016075">
        <property type="term" value="P:rRNA catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006364">
        <property type="term" value="P:rRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008033">
        <property type="term" value="P:tRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd11362">
        <property type="entry name" value="RNase_PH_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00564">
        <property type="entry name" value="RNase_PH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001247">
        <property type="entry name" value="ExoRNase_PH_dom1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015847">
        <property type="entry name" value="ExoRNase_PH_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036345">
        <property type="entry name" value="ExoRNase_PH_dom2_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027408">
        <property type="entry name" value="PNPase/RNase_PH_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002381">
        <property type="entry name" value="RNase_PH_bac-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018336">
        <property type="entry name" value="RNase_PH_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01138">
        <property type="entry name" value="RNase_PH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03725">
        <property type="entry name" value="RNase_PH_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="SSF54211"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55666">
        <property type="entry name" value="SSF55666"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01966">
        <property type="entry name" value="RNasePH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01277">
        <property type="entry name" value="RIBONUCLEASE_PH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="1 4" id="KW-0698">rRNA processing</keyword>
    <keyword evidence="4 7" id="KW-0808">Transferase</keyword>
    <keyword evidence="3 4" id="KW-0819">tRNA processing</keyword>
    <keyword evidence="2 4" id="KW-0820">tRNA-binding</keyword>
    <feature type="domain" description="RNase_PH" evidence="5">
        <location>
            <begin position="46"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="domain" description="RNase_PH_C" evidence="6">
        <location>
            <begin position="195"/>
            <end position="259"/>
        </location>
    </feature>
    <feature type="region of interest" description="Phosphate (substrate) binding" evidence="4">
        <location>
            <begin position="160"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="122"/>
        </location>
        <ligand>
            <name>phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <note>substrate</note>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00564"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF01138"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF03725"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ77147.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="273" mass="29726" checksum="23D05224FEAEC9A7" modified="2015-12-09" version="1">MVKLGLYGAGKWGLKGREQTRRTFEFCLDNGLKGRAMRPSKRAADELRAVTLERGVSKHAEGSCLVKFGDTHVLCTASLEERVPPWLRGQNKGWVTAEYGMLPRATGSRMRREASAGKQSGRTQEIQRLIGRSLRAVVDLRALGEVQISVDCDVIQADGGTRTAAITGAWVALRDCVEWMKARDMVSGDVLTDHIAAISCGIYESTPVLDLDYDEDSTAETDANFVMTGSGGIVEIQGTAEGKPFSEDEFGQLMNLAKAGITRLVDLQKMAIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARN6</accession>
    <name>A0A0M7ARN6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Methylenetetrahydrofolate reductase</fullName>
            <ecNumber evidence="10">1.5.1.20</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">metF</name>
        <name evidence="11" type="ORF">LAX5112_04534</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="2 10">
            <text>(6S)-5-methyl-5,6,7,8-tetrahydrofolate + NAD(+) = (6R)-5,10-methylene-5,6,7,8-tetrahydrofolate + H(+) + NADH</text>
            <dbReference type="Rhea" id="RHEA:19821"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15636"/>
            <dbReference type="ChEBI" id="CHEBI:18608"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="EC" id="1.5.1.20"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 10">
            <text>(6S)-5-methyl-5,6,7,8-tetrahydrofolate + NADP(+) = (6R)-5,10-methylene-5,6,7,8-tetrahydrofolate + H(+) + NADPH</text>
            <dbReference type="Rhea" id="RHEA:19817"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15636"/>
            <dbReference type="ChEBI" id="CHEBI:18608"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="EC" id="1.5.1.20"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="3 10">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="4 10">One-carbon metabolism; tetrahydrofolate interconversion.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5 10">Belongs to the methylenetetrahydrofolate reductase family.</text>
    </comment>
    <dbReference type="EC" id="1.5.1.20" evidence="10"/>
    <dbReference type="EMBL" id="CXWD01000025">
        <property type="protein sequence ID" value="CTQ76244.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673725.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000025.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04534"/>
    <dbReference type="EnsemblBacteria" id="CTQ76244">
        <property type="protein sequence ID" value="CTQ76244"/>
        <property type="gene ID" value="LAX5112_04534"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00193"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0106312">
        <property type="term" value="F:methylenetetrahydrofolate reductase NADH activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0106313">
        <property type="term" value="F:methylenetetrahydrofolate reductase NADPH activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009086">
        <property type="term" value="P:methionine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035999">
        <property type="term" value="P:tetrahydrofolate interconversion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd00537">
        <property type="entry name" value="MTHFR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029041">
        <property type="entry name" value="FAD-linked_oxidoreductase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003171">
        <property type="entry name" value="Mehydrof_redctse-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004620">
        <property type="entry name" value="MTHF_reductase_bac"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02219">
        <property type="entry name" value="MTHFR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51730">
        <property type="entry name" value="SSF51730"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00676">
        <property type="entry name" value="fadh2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 10" id="KW-0274">FAD</keyword>
    <keyword evidence="6 10" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="9" id="KW-0520">NAD</keyword>
    <keyword evidence="8 10 11" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000431"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001287"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00004777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00006743"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU003862"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ76244.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="303" mass="33481" checksum="27753675486E4B55" modified="2015-12-09" version="1">MTVLSSRLSRGVIKTPITASFEFFPPKSEKMGETLWETVQRLAPLNPSFVSVTYGAGGSTRERTHKTVERILNETDLAPAAHLTCVGSPKAEVDAIVKDYWDLGVRHLVALRGDPLAGIGAVYEPHPEGYAYATDLVEGIKKIANFDVSVSGYPEKHPESGSWQKEIDNLKRKVDAGADRIITQYFFDNDLFDDYLDRIAAAGINIPVIPGILPIHNFEQTMVFSAKCGTSIPEWVARRFACLQNDPETRKLVGVAIACEQVMDLVDRGLTDFHFYTMNRADLTYAICHMLGMGQQGTEKVAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASD6</accession>
    <name>A0A0M7ASD6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04955</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000037">
        <property type="protein sequence ID" value="CTQ77567.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674095.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000037.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77567">
        <property type="protein sequence ID" value="CTQ77567"/>
        <property type="gene ID" value="LAX5112_04955"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ77567.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="79" mass="8605" checksum="E15C31786B0BD405" modified="2015-12-09" version="1">MTATRWEVEQLADGITMVISSLGPIDHMVEMSIVETQNGTFTYEALKGRETLSEGVAPTLPAAIRAAENAARRALFRIV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ATR5</accession>
    <name>A0A0M7ATR5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative symporter YjmB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yjmB</name>
        <name evidence="3" type="ORF">LAX5112_04994</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the sodium:galactoside symporter (TC 2.A.2) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000038">
        <property type="protein sequence ID" value="CTQ77650.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04994"/>
    <dbReference type="EnsemblBacteria" id="CTQ77650">
        <property type="protein sequence ID" value="CTQ77650"/>
        <property type="gene ID" value="LAX5112_04994"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015293">
        <property type="term" value="F:symporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008643">
        <property type="term" value="P:carbohydrate transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039672">
        <property type="entry name" value="MFS_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11328">
        <property type="entry name" value="PTHR11328"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="32"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="57"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="99"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="126"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="168"/>
            <end position="188"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="194"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="244"/>
            <end position="267"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="279"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="308"/>
            <end position="324"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="330"/>
            <end position="350"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="371"/>
            <end position="399"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="411"/>
            <end position="435"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ77650.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="447" mass="48153" checksum="6FDE2CAD418503B7" modified="2015-12-09" version="1">MTISEQTATETGRTVNLATSGQTSGRITTRSILVYGALAFPLSFAGLPIYLHAPDFYAVTLGQSLASLGVVLLALRLIDAFQDPFIGSISDRLHLHRPKILAVGTVMLGVGFWMLFHPLTSAPLPWFALSVLICTTGFSIVTINLQTLGGLWESRPQDRTRITGGREALGLLGLLAAAITPTLLTQWAGQEQAFHYLTVAYLPLLVVGLLLLLSWMKSAELSAPKQAHHRPNWLSLLKDRWRSVFFSLVLLNTFASAIPAVLVLFYVRDRLGAEPYTGLFLLIYFLSGTASMPLWIKLASKFGKIRAWQLSLGLSIVTFIWAVFLGRGDIAAYAIVCTLSGLALGADLALPPAILADHIDADDRQTDASRLFSLMALLSKTSLAAATGLALPILGVLGYVPGGDMTPRLDWVLSLTYAALPCALKLAALGGLIWAQDILTKNKSAVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AU84</accession>
    <name>A0A0M7AU84_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Patatin-like phospholipase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">LAX5112_04881</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000033">
        <property type="protein sequence ID" value="CTQ77343.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77343">
        <property type="protein sequence ID" value="CTQ77343"/>
        <property type="gene ID" value="LAX5112_04881"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016042">
        <property type="term" value="P:lipid catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016035">
        <property type="entry name" value="Acyl_Trfase/lysoPLipase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002641">
        <property type="entry name" value="PNPLA_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01734">
        <property type="entry name" value="Patatin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52151">
        <property type="entry name" value="SSF52151"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51635">
        <property type="entry name" value="PNPLA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0442">Lipid degradation</keyword>
    <keyword evidence="1 2" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PNPLA" evidence="4">
        <location>
            <begin position="80"/>
            <end position="275"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="383"/>
            <end position="412"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="GXGXXG" evidence="2">
        <location>
            <begin position="84"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="2">
        <location>
            <position position="115"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="2">
        <location>
            <position position="262"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01161"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51635"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ77343.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="412" mass="44836" checksum="CCFB51509BE1DCDF" modified="2015-12-09" version="1">MRFLFVLAVSIVVASCAPNRPPALPTDYSDSVMPWGVVDTDADPPAVVLPGRRINSLPSSASVVKDLRRGRSGSYEYPVLSISGGGSHGAWGAGFLKGWSETGTRPDFRVVTAMSVGALLATPAFLGPEYDRILTRFFVEGKQSEFYRVGPGSIIGGLLGSGHFADNTPGLKLLNELLDDTVIDAVAREYRNGRRLYVSTANFDNNRWTLWDLGAIAASGEPDRYHRYRQVILAAIAVPAAFPPVYFPVEVAGKTYGQMHLDAGTNFVFFGSFMTGTDAAALAEANLQVDVEPVVYALMNTQREPNLAANPSGAPLDLAGRAYQRIGRFASYAALDRLWVYATERDAEVRIAYIPDDLPIPFDVFEFPQPQMSELFDEGRRSAAGYPFLNRPPDLPPPPSDAEKSHVNGRVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AVM3</accession>
    <name>A0A0M7AVM3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04986</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000038">
        <property type="protein sequence ID" value="CTQ77634.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040450891.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000038.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77634">
        <property type="protein sequence ID" value="CTQ77634"/>
        <property type="gene ID" value="LAX5112_04986"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="32"/>
            <end position="52"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77634.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="69" mass="7715" checksum="F3B17B13B9244BF4" modified="2015-12-09" version="1">MPKRMDKDSLFKAVPQTPVTKAEITKKAAQDLAHAETEARRIKTEKLKKARLEQEVSRLAEAGSKPKGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZM83</accession>
    <name>A0A0M6ZM83_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Undecaprenyl pyrophosphate phosphatase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_00097</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63868.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670136.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00097"/>
    <dbReference type="EnsemblBacteria" id="CTQ63868">
        <property type="protein sequence ID" value="CTQ63868"/>
        <property type="gene ID" value="LAX5112_00097"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036938">
        <property type="entry name" value="P_Acid_Pase_2/haloperoxi_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000326">
        <property type="entry name" value="P_Acid_Pase_2/haloperoxidase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01569">
        <property type="entry name" value="PAP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00014">
        <property type="entry name" value="acidPPc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48317">
        <property type="entry name" value="SSF48317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="48"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="91"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="120"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="177"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="225"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="domain" description="acidPPc" evidence="2">
        <location>
            <begin position="130"/>
            <end position="240"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ63868.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="298" mass="32964" checksum="1886C7D03EB9DFAA" modified="2015-12-09" version="1">MSSNSRIKWVLERMRGNARRAMILYSNRKERGTAQLRTLPPGQRPQDILAVLLLTVGVAVVAFDAPTYPWLNSLPNEYRTAFRSFTDLGKADWILISTGVPCLFLLALDAGRYAFRIRMAIGAVFTYAAFVFYTVAASGIVVLIIKWSLGRARPKLYEEFGPVHFDFLAFHGKFTSFPSGHSTTVAALATALCFIFPAYRWLIVVSAFWLAFSRVMAGAHYPSDVIAGTLLGMTFTFFTVRAMARRRIGFHIAENGNIVPNMTAISAKASARAVWQVLRGQRGAQRIVPGRAAASEAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZNB1</accession>
    <name>A0A0M6ZNB1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00084</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63837.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00084"/>
    <dbReference type="EnsemblBacteria" id="CTQ63837">
        <property type="protein sequence ID" value="CTQ63837"/>
        <property type="gene ID" value="LAX5112_00084"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ63837.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="270" mass="30397" checksum="2189254933EADD45" modified="2015-12-09" version="1">MFFFLCIPQPCPTLDKGWEKSGGTAFAWAKQGKMFSDQKHQTTLEVAAATAVVKALIMGAGLTVRESSDFGLFEETIRKTEDKYLMEDFSPRFFDLHGSTAFWIGAYDERGNVVSVQAAKVEDLQDRSLAEHWQQQQRRIFVDPNPQARFGNDHAHDAYFLRGKIVYHGNLWLRRDVRGKGLAEPLTQLGFLVALLKWSPDYLYGLMAASAAEKGFGIRVGYRRFVPRGTHWELPPGHIRPDDWLVYSTRSDLIGLARTIAATGGVADPE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZP59</accession>
    <name>A0A0M6ZP59_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Heme-based aerotactic transducer HemAT</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">hemAT_1</name>
        <name evidence="4" type="ORF">LAX5112_00108</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63900.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670142.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ63900">
        <property type="protein sequence ID" value="CTQ63900"/>
        <property type="gene ID" value="LAX5112_00108"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019825">
        <property type="term" value="F:oxygen binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004888">
        <property type="term" value="F:transmembrane signaling receptor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006935">
        <property type="term" value="P:chemotaxis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01068">
        <property type="entry name" value="globin_sensor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.490.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004090">
        <property type="entry name" value="Chemotax_Me-accpt_rcpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009050">
        <property type="entry name" value="Globin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044398">
        <property type="entry name" value="Globin-sensor_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012292">
        <property type="entry name" value="Globin/Proto"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004089">
        <property type="entry name" value="MCPsignal_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039379">
        <property type="entry name" value="Protoglobin_sensor_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00015">
        <property type="entry name" value="MCPsignal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11563">
        <property type="entry name" value="Protoglobin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00260">
        <property type="entry name" value="CHEMTRNSDUCR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00283">
        <property type="entry name" value="MA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46458">
        <property type="entry name" value="SSF46458"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50111">
        <property type="entry name" value="CHEMOTAXIS_TRANSDUC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0807">Transducer</keyword>
    <feature type="domain" description="Methyl-accepting transducer" evidence="3">
        <location>
            <begin position="162"/>
            <end position="412"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="202"/>
            <end position="222"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ63900.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="444" mass="48174" checksum="7DC16DF1889BA782" modified="2015-12-09" version="1">MSETDFDHRLKFAEIDSKTISALKKTWPVIQPALDDLLAGFYAHIKAEPHMAKMVGDQQPRLVGAQKSHWEKLFLSGFDKDYQESINRIGHIHCRIGLEPRWYIAGYKFVLTRLHRHLVKKYRTSFTDLGDVLEHVTAAVLFDMDLAISTYEEQLLLERAEQANKLNRAIEQFREKIEKPLKDADEGARIVTSEAAQLESVSRDAQDQISSAETVSKDSSDSVQTVAAATEELSSSIQEISKQIVGASRIASEASAGTERSSDQVASLAGAAQKIGDVVGLIQAIAEQTNLLALNATIEAARAGDAGKGFAVVAAEVKELAQQTAKATEEISQQVSEIQESTDGAVGSIQSIAEVVKQLDEMTSSIAAAVEEQGAATQEISHSVQTVANGAQTLEENIEGVGHAVVATDRAAVNFKTAADRMNTSVYVISDEIKNFFETLRTGT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPQ8</accession>
    <name>A0A0M6ZPQ8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 8">Pyruvate dehydrogenase E1 component subunit beta</fullName>
            <ecNumber evidence="4 8">1.2.4.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">bfmBAB</name>
        <name evidence="11" type="ORF">LAX5112_00226</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>(R)-N(6)-lipoyl-L-lysyl-[dihydrolipoyllysine-residue acetyltransferase] + H(+) + pyruvate = (R)-N(6)-(S(8)-acetyldihydrolipoyl)-L-lysyl-[dihydrolipoyllysine-residue acetyltransferase] + CO2</text>
            <dbReference type="Rhea" id="RHEA:19189"/>
            <dbReference type="Rhea" id="RHEA-COMP:10480"/>
            <dbReference type="Rhea" id="RHEA-COMP:10481"/>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:83099"/>
            <dbReference type="ChEBI" id="CHEBI:83111"/>
            <dbReference type="EC" id="1.2.4.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>(R)-lipoate</name>
            <dbReference type="ChEBI" id="CHEBI:83088"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 8">
            <name>thiamine diphosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58937"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="3">Heterodimer of an alpha and a beta chain.</text>
    </comment>
    <dbReference type="EC" id="1.2.4.1" evidence="4 8"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64232.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670222.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00226"/>
    <dbReference type="EnsemblBacteria" id="CTQ64232">
        <property type="protein sequence ID" value="CTQ64232"/>
        <property type="gene ID" value="LAX5112_00226"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004739">
        <property type="term" value="F:pyruvate dehydrogenase (acetyl-transferring) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006086">
        <property type="term" value="P:acetyl-CoA biosynthetic process from pyruvate"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.920">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003016">
        <property type="entry name" value="2-oxoA_DH_lipoyl-BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000089">
        <property type="entry name" value="Biotin_lipoyl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027110">
        <property type="entry name" value="PDHB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011053">
        <property type="entry name" value="Single_hybrid_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029061">
        <property type="entry name" value="THDP-binding"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009014">
        <property type="entry name" value="Transketo_C/PFOR_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005475">
        <property type="entry name" value="Transketolase-like_Pyr-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033248">
        <property type="entry name" value="Transketolase_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11624">
        <property type="entry name" value="PTHR11624"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00364">
        <property type="entry name" value="Biotin_lipoyl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02779">
        <property type="entry name" value="Transket_pyr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02780">
        <property type="entry name" value="Transketolase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00861">
        <property type="entry name" value="Transket_pyr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51230">
        <property type="entry name" value="SSF51230"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52518">
        <property type="entry name" value="SSF52518"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52922">
        <property type="entry name" value="SSF52922"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50968">
        <property type="entry name" value="BIOTINYL_LIPOYL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00189">
        <property type="entry name" value="LIPOYL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0450">Lipoyl</keyword>
    <keyword evidence="8 11" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7 8" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0786">Thiamine pyrophosphate</keyword>
    <feature type="domain" description="Lipoyl-binding" evidence="10">
        <location>
            <begin position="2"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="109"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="9">
        <location>
            <begin position="112"/>
            <end position="126"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001938"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001964"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011870"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012281"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00016138"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022823"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023317"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU364074"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ64232.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="464" mass="48773" checksum="A26B55CCB441D67A" modified="2015-12-09" version="1">MPIDILMPALSPTMEEGKLAKWLKAEGDTVSAGDVIAEIETDKATMEVEAVDEGTLGKILVAEGTDNVKVNEKIAILLGEGEDASAADAAASAPAADAAPAAAAAPAAPSPAVASAPTPQAPAPETAEDPEIPAGTSMKSSTVREALRDAMAEEMRRDGDVFVMGEEVAEYQGAYKITQGLLDEFGEKRVIDTPITEHGFAGLGVGAAMAGLKPIVEFMTFNFAMQAIDQIINSAAKTLYMSGGQMGAPMVFRGPNGAAARVGAQHSQDYAAWYAHVPGLKVIQPYSAADAKGLLKAAIRDPNPVIFLENEILYGHSFEIPDMDDFVLPIGKAKIERGGTDVTLVSWGIGMTYAMKAAEELAGMGISAEVVNLRTIRPLDIDTVLASVRKTGRVVTVEEAFPMCSVSSEIAFQVQEKAFDYLDAPILRVTGKDVPMPYAANLEKLALPNVGEVIDAVKAVTYTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQ93</accession>
    <name>A0A0M6ZQ93_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00439</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64898.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ64898">
        <property type="protein sequence ID" value="CTQ64898"/>
        <property type="gene ID" value="LAX5112_00439"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ64898.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="111" mass="12364" checksum="7C4B091C2EB83370" modified="2015-12-09" version="1">MRAHKPSVCLIWGRYEEWNIYRQLVMQNAALACPMIPVAMHKKASNASEIGQKLMRCQKARVRVQVHAALENIRKLQNAAFGTLPASNKNKADVGLTKSRPLAGVQAKPPF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQP9</accession>
    <name>A0A0M6ZQP9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00050</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63743.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670110.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ63743">
        <property type="protein sequence ID" value="CTQ63743"/>
        <property type="gene ID" value="LAX5112_00050"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="44"/>
            <end position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ63743.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="63" mass="7355" checksum="68481D290B214D6E" modified="2015-12-09" version="1">MRTQNELAPYFREIDRRTDRALEGVREVRKSAKLRALPAEPKPWFINTGFLVLLTFFVALFAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQS9</accession>
    <name>A0A0M6ZQS9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Cytochrome c class I</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">LAX5112_00334</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64602.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670330.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00334"/>
    <dbReference type="EnsemblBacteria" id="CTQ64602">
        <property type="protein sequence ID" value="CTQ64602"/>
        <property type="gene ID" value="LAX5112_00334"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.760.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009056">
        <property type="entry name" value="Cyt_c-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036909">
        <property type="entry name" value="Cyt_c-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002327">
        <property type="entry name" value="Cyt_c_1A/1B"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11961">
        <property type="entry name" value="PTHR11961"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00034">
        <property type="entry name" value="Cytochrom_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00604">
        <property type="entry name" value="CYTCHRMECIAB"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46626">
        <property type="entry name" value="SSF46626"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51007">
        <property type="entry name" value="CYTC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 5" id="KW-0349">Heme</keyword>
    <keyword evidence="4 5" id="KW-0408">Iron</keyword>
    <keyword evidence="3 5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="6">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005808901" evidence="6">
        <location>
            <begin position="20"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="domain" description="Cytochrome c" evidence="7">
        <location>
            <begin position="23"/>
            <end position="126"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00433"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ64602.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="132" mass="14185" checksum="CF79CE6C102FB54D" modified="2015-12-09" version="1">MKRMLMIAGTALIAFTAQASAEGDPAKGEKVFKKCAACHAVGEGAKNKVGPQLNGVVGRAWGTIDGYKYSATLKEGADEGRVWDVETLDAYLLKPRDVIPKGRMAFAGLRKDEDRADVIAYLSQYSEDGTTN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQT3</accession>
    <name>A0A0M6ZQT3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7 17">Phosphatidylcholine synthase</fullName>
            <shortName evidence="17">PC synthase</shortName>
            <shortName evidence="17">PCS</shortName>
            <ecNumber evidence="6 17">2.7.8.24</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="16 17">CDP-diglyceride-choline O-phosphatidyltransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="19" type="primary">pcs</name>
        <name evidence="19" type="ORF">LAX5112_00309</name>
    </gene>
    <organism evidence="19 20">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="20" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="20">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="17">Condenses choline with CDP-diglyceride to produce phosphatidylcholine and CMP.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 17">
            <text>a CDP-1,2-diacyl-sn-glycerol + choline = a 1,2-diacyl-sn-glycero-3-phosphocholine + CMP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:14597"/>
            <dbReference type="ChEBI" id="CHEBI:15354"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57643"/>
            <dbReference type="ChEBI" id="CHEBI:58332"/>
            <dbReference type="ChEBI" id="CHEBI:60377"/>
            <dbReference type="EC" id="2.7.8.24"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 17">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4 17">Cell inner membrane</location>
            <topology evidence="4 17">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="3">Membrane</location>
            <topology evidence="3">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5 17">Belongs to the CDP-alcohol phosphatidyltransferase class-I family.</text>
    </comment>
    <dbReference type="EC" id="2.7.8.24" evidence="6 17"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64470.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670284.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00309"/>
    <dbReference type="EnsemblBacteria" id="CTQ64470">
        <property type="protein sequence ID" value="CTQ64470"/>
        <property type="gene ID" value="LAX5112_00309"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050520">
        <property type="term" value="F:phosphatidylcholine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008654">
        <property type="term" value="P:phospholipid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.1760">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043130">
        <property type="entry name" value="CDP-OH_PTrfase_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026027">
        <property type="entry name" value="PcS"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000851">
        <property type="entry name" value="PcS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 17" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="17" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8 17" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="13 17" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="15 17" id="KW-0464">Manganese</keyword>
    <keyword evidence="14 17 18" id="KW-0472">Membrane</keyword>
    <keyword evidence="17" id="KW-0594">Phospholipid biosynthesis</keyword>
    <keyword evidence="17" id="KW-1208">Phospholipid metabolism</keyword>
    <keyword evidence="20" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10 17 19" id="KW-0808">Transferase</keyword>
    <keyword evidence="11 18" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="12 18" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="18">
        <location>
            <begin position="16"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="18">
        <location>
            <begin position="44"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="18">
        <location>
            <begin position="82"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="18">
        <location>
            <begin position="106"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="18">
        <location>
            <begin position="143"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="18">
        <location>
            <begin position="184"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="18">
        <location>
            <begin position="210"/>
            <end position="230"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000958"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00010441"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00013195"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00015623"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022519"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00033321"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="PIRNR" id="PIRNR000851"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="EMBL" id="CTQ64470.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="238" mass="25980" checksum="1CAB8CF92F0CD299" modified="2015-12-09" version="1">MTDVTPGKVAPEPALFLIHILTASGAPIALIALLAGAQGKWDEMFAWLGLALFVDGIDGPLARKYNIAERLPRWSGASLDFVIDYATYVFLPAFALSWSLMLSSPWNWICGGLVVFTGALYFADNGMKTPDGSFKGFPAGWNMVVFGLMVLSPSEAFTIAAVIVCCVLTFAPIRFVHPVRVKRWRWLTLPVTLVWMALAALAIWDGMVLSTWVAGLFTAASLYLFSVSAVQQLIDRVD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZR58</accession>
    <name>A0A0M6ZR58_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Protein-L-isoaspartate O-methyltransferase</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">L-isoaspartyl protein carboxyl methyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="3">Protein L-isoaspartyl methyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="4">Protein-beta-aspartate methyltransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6" type="primary">pcm_1</name>
        <name evidence="6" type="ORF">LAX5112_00142</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the methyltransferase superfamily. L-isoaspartyl/D-aspartyl protein methyltransferase family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63994.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008189680.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00142"/>
    <dbReference type="EnsemblBacteria" id="CTQ63994">
        <property type="protein sequence ID" value="CTQ63994"/>
        <property type="gene ID" value="LAX5112_00142"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004719">
        <property type="term" value="F:protein-L-isoaspartate (D-aspartate) O-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000682">
        <property type="entry name" value="PCMT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11579">
        <property type="entry name" value="PTHR11579"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005369"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00013346"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00030757"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00031323"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00031350"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ63994.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="220" mass="23208" checksum="ACE5BB099FA8FA1E" modified="2015-12-09" version="1">MTDFNQSRRKMVDNQLRTNDVTDHQILDAMEVVPRERFVPASKRAVAYIDEDLPIGASGSGRYLMKPHIFGKLIQLAQISADDIVLVIGAGSGYSTAVAAKLAASVVALEENADLARDAGDLLVDLGTENAVVVEGPLVDGYAAEGPYDVILIDGAVEVLSEALLKQLKSDGRLVVIEGQGGAGVAKLYQKSGEVVSGRFAFNASAALLPGFAQAAEFTF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZR59</accession>
    <name>A0A0M6ZR59_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7 9">Cytidine deaminase</fullName>
            <ecNumber evidence="6 9">3.5.4.5</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8 9">Cytidine aminohydrolase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="primary">cdd</name>
        <name evidence="11" type="ORF">LAX5112_00563</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4 9">This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2 9">
            <text>2'-deoxycytidine + H(+) + H2O = 2'-deoxyuridine + NH4(+)</text>
            <dbReference type="Rhea" id="RHEA:13433"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15698"/>
            <dbReference type="ChEBI" id="CHEBI:16450"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="EC" id="3.5.4.5"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 9">
            <text>cytidine + H(+) + H2O = NH4(+) + uridine</text>
            <dbReference type="Rhea" id="RHEA:16069"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16704"/>
            <dbReference type="ChEBI" id="CHEBI:17562"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="EC" id="3.5.4.5"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="3 9">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="5 9">Belongs to the cytidine and deoxycytidylate deaminase family.</text>
    </comment>
    <dbReference type="EC" id="3.5.4.5" evidence="6 9"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65255.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008188579.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00563"/>
    <dbReference type="EnsemblBacteria" id="CTQ65255">
        <property type="protein sequence ID" value="CTQ65255"/>
        <property type="gene ID" value="LAX5112_00563"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004126">
        <property type="term" value="F:cytidine deaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047844">
        <property type="term" value="F:deoxycytidine deaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002125">
        <property type="entry name" value="CMP_dCMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006262">
        <property type="entry name" value="Cyt_deam_tetra"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016193">
        <property type="entry name" value="Cytidine_deaminase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00383">
        <property type="entry name" value="dCMP_cyt_deam_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53927">
        <property type="entry name" value="SSF53927"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01354">
        <property type="entry name" value="cyt_deam_tetra"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51747">
        <property type="entry name" value="CYT_DCMP_DEAMINASES_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 11" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="CMP/dCMP-type deaminase" evidence="10">
        <location>
            <begin position="2"/>
            <end position="128"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000393"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00000631"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00003949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00006576"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00012783"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00018266"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00032005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU364006"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51747"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ65255.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="132" mass="14135" checksum="3D43140391514925" modified="2015-12-09" version="1">MSDLDKLFEAAKAVREKAYAPYSNFLVGAAFRTPDGAIFTGCNVENASYPVSVCAEGGAASAMIAAGYREIEEAVVIGDAALCTPCGMCRQRFAEFGTENLVVHVADLDGIRRSFTLDELLPAAFELEDKKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRK6</accession>
    <name>A0A0M6ZRK6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Bicarbonate transport system permease protein CmpB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">cmpB</name>
        <name evidence="7" type="ORF">LAX5112_00437</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64892.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670398.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00437"/>
    <dbReference type="EnsemblBacteria" id="CTQ64892">
        <property type="protein sequence ID" value="CTQ64892"/>
        <property type="gene ID" value="LAX5112_00437"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="62"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="160"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="201"/>
            <end position="219"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="225"/>
            <end position="247"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="282"/>
            <end position="305"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="325"/>
            <end position="343"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="153"/>
            <end position="347"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ64892.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="360" mass="39149" checksum="2B50A2731F443DBB" modified="2015-12-09" version="1">MANADTASSPDLARAARKEKLFTSINKAGGWLDALGFSWLVPLLKIAAGDSPKEQMGELKRVLVIPLIGILAFLAMWAALAPQVQTSLGAVPGPAQVWAQTINLWEDHVREREKADAFYERQDARNAKFAAEGKTDRIKHRNYTGKPTYIDQIGTSLKTVGLGFLIATIIAVPLGIASGLSRTFNGAINPLIQIFKPVSPLAWLPIVTMIISATYANPYDWLSKSLLISAVTVTLCSMWPTLINTALGVASVDKDLMNVGRVLQLPTWKTITKLVLPSSLPLIFTGLRLSLGVGWMVLIAAEMLAQNPGLGKFVWDEFQNGSSQSLAKIMVAVLTIGLIGFMLDRLMFALQRAFTFSANR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSP4</accession>
    <name>A0A0M6ZSP4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Xanthine dehydrogenase accessory protein XdhC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_00303</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64453.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670279.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00303"/>
    <dbReference type="EnsemblBacteria" id="CTQ64453">
        <property type="protein sequence ID" value="CTQ64453"/>
        <property type="gene ID" value="LAX5112_00303"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014308">
        <property type="entry name" value="Xanthine_DH_XdhC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003777">
        <property type="entry name" value="XdhC_CoxI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027051">
        <property type="entry name" value="XdhC_Rossmann_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13478">
        <property type="entry name" value="XdhC_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02625">
        <property type="entry name" value="XdhC_CoxI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02964">
        <property type="entry name" value="xanthine_xdhC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="XdhC_CoxI" evidence="1">
        <location>
            <begin position="14"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="domain" description="XdhC_C" evidence="2">
        <location>
            <begin position="167"/>
            <end position="307"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02625"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ64453.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="329" mass="34863" checksum="A997598C3B1A3C30" modified="2015-12-09" version="1">MKVWGHIANCLKSSGACALVTVAETGGSTPREPGARMIVRADGGFFGTIGGGTLEFEVIRQAAKAASSKTAGFELQTVSLGPDLGQCCGGRAKIAIEVFVSEQLETADRLALEESKPYPFVTHAIIDNGSVREREVADQVSENAFEIVDVNGKELLIEQFGETRRTLYLFGAGHVGKALVLALAPLPFSIVWIDSRAEQFPSAVPANVTKVCISDPAKALADAPDGAFVLAMTHSHGLDEEIMARALLAQRFEYSGVIGSKTKRARFLKRLKIRGLSDSVLSTLVCPVGVTTIKSKHPAAIAAGIVVDLIARDEACYQQAAASGMLAHK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUJ0</accession>
    <name>A0A0M6ZUJ0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase</fullName>
            <ecNumber evidence="9">2.3.1.117</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">Tetrahydrodipicolinate N-succinyltransferase</fullName>
            <shortName evidence="9">THDP succinyltransferase</shortName>
            <shortName evidence="9">THP succinyltransferase</shortName>
            <shortName evidence="9">Tetrahydropicolinate succinylase</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9 11" type="primary">dapD</name>
        <name evidence="11" type="ORF">LAX5112_00518</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>(S)-2,3,4,5-tetrahydrodipicolinate + H2O + succinyl-CoA = (S)-2-succinylamino-6-oxoheptanedioate + CoA</text>
            <dbReference type="Rhea" id="RHEA:17325"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15685"/>
            <dbReference type="ChEBI" id="CHEBI:16845"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57292"/>
            <dbReference type="EC" id="2.3.1.117"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="9">Amino-acid biosynthesis; L-lysine biosynthesis via DAP pathway; LL-2,6-diaminopimelate from (S)-tetrahydrodipicolinate (succinylase route): step 1/3.</text>
    </comment>
    <comment type="subunit">
        <text evidence="9">Homotrimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 9">Belongs to the transferase hexapeptide repeat family.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.117" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65123.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670464.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00518"/>
    <dbReference type="EnsemblBacteria" id="CTQ65123">
        <property type="protein sequence ID" value="CTQ65123"/>
        <property type="gene ID" value="LAX5112_00518"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00034">
        <property type="reaction ID" value="UER00019"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008666">
        <property type="term" value="F:2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019877">
        <property type="term" value="P:diaminopimelate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009089">
        <property type="term" value="P:lysine biosynthetic process via diaminopimelate"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.166.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00811">
        <property type="entry name" value="DapD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005664">
        <property type="entry name" value="DapD_Trfase_Hexpep_rpt_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001451">
        <property type="entry name" value="Hexapep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018357">
        <property type="entry name" value="Hexapep_transf_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023180">
        <property type="entry name" value="THP_succinylTrfase_dom1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037133">
        <property type="entry name" value="THP_succinylTrfase_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011004">
        <property type="entry name" value="Trimer_LpxA-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00132">
        <property type="entry name" value="Hexapep"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14602">
        <property type="entry name" value="Hexapep_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14805">
        <property type="entry name" value="THDPS_N_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51161">
        <property type="entry name" value="SSF51161"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00965">
        <property type="entry name" value="dapD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00101">
        <property type="entry name" value="HEXAPEP_TRANSFERASES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 9 11" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="3 9" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="2 9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 9" id="KW-0220">Diaminopimelate biosynthesis</keyword>
    <keyword evidence="7 9" id="KW-0457">Lysine biosynthesis</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 9" id="KW-0677">Repeat</keyword>
    <keyword evidence="4 9 11" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="THDPS_N_2" evidence="10">
        <location>
            <begin position="8"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="109"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="146"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022915"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023154"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00811"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF14805"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ65123.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="283" mass="30154" checksum="5B9388CEB0C2F447" modified="2015-12-09" version="1">MTHDLAALSKIIDAAFEDSASIDIHTTGDVRNAVETTLNLLDRGQLRVAEKKDGGWVVNQWAKKAVLLSFRLNPMDVIKGGPGDATWWDKVPSKFDGWRGLDFEDAGFRAVPNCTVRRSAFIGKGVVLMPSFVNLGAYVDEGTMVDTWATVGSCAQIGKNVHLSGGVGIGGVLEPLQAGPVIIEDNCFIGARSEVVEGCIVREGSVLGMGVFIGKSTKIVNRMTGEITYGEVPPYSVVVAGSMPSANTMGNGVAAPHLYCAVIVKTVDEKTRSKTAINELLRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVN6</accession>
    <name>A0A0M6ZVN6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Cell division inhibitor MinD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">minD_2</name>
        <name evidence="2" type="ORF">LAX5112_01116</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66849.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670976.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01116"/>
    <dbReference type="EnsemblBacteria" id="CTQ66849">
        <property type="protein sequence ID" value="CTQ66849"/>
        <property type="gene ID" value="LAX5112_01116"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025669">
        <property type="entry name" value="AAA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13614">
        <property type="entry name" value="AAA_31"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="2" id="KW-0132">Cell division</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA_31" evidence="1">
        <location>
            <begin position="2"/>
            <end position="176"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66849.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="257" mass="28245" checksum="EDEF13370F69D8D9" modified="2015-12-09" version="1">MTKIISTHSYRGGTGKSNVTANIAASLALRGHKVGIVDTDIQSPGIHTLFHVDLNTVTHTLNNYLWGYCGIKDTVLDITNGVKGPDGKPSITGQGKVFFIPSSIKTGDIARIVKEMYDVEALNRGFMEFCDTMDLDYLLIDTHPGVNEETLLSIAVSDTLLLILRPDIQDYQGTAVTLELARKLEVPQLFLIVNKALETFDFQDLSQRIFSNYRTPVAAVLPLSTDLIQIGSTGLIRTLHPDHAFTRSIETIADSIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZW23</accession>
    <name>A0A0M6ZW23_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">General stress protein 14</fullName>
            <ecNumber evidence="2">1.6.99.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ywrO</name>
        <name evidence="2" type="ORF">LAX5112_00928</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.6.99.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66260.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670811.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00928"/>
    <dbReference type="EnsemblBacteria" id="CTQ66260">
        <property type="protein sequence ID" value="CTQ66260"/>
        <property type="gene ID" value="LAX5112_00928"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.360">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003680">
        <property type="entry name" value="Flavodoxin_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029039">
        <property type="entry name" value="Flavoprotein-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02525">
        <property type="entry name" value="Flavodoxin_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52218">
        <property type="entry name" value="SSF52218"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Flavodoxin_2" evidence="1">
        <location>
            <begin position="3"/>
            <end position="170"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66260.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="205" mass="23120" checksum="DE4F021D50A52C1D" modified="2015-12-09" version="1">MAKVLVLYAHPRPDRSEINQPLFETAKGVQGVTAVDLYAEYPDFDIRVDVEQERLRTHDIIIFQHPFYWYSAPSIMKEWQDLVLEHGFAYGLHGKALVGKSFMNVTTAGAKPEAYSADGLNHSDIRSLLAPFEKTADLCGMRFLAPFIMFGAGRALEENRLNVHRNAYDDLLKAMVADRFDLEKAAKAKQISDVLDDFILKGEAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZW36</accession>
    <name>A0A0M6ZW36_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Glutathione reductase</fullName>
            <shortName evidence="11">GRase</shortName>
            <ecNumber evidence="11">1.8.1.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="primary">garB</name>
        <name evidence="14" type="ORF">LAX5112_00962</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11">Maintains high levels of reduced glutathione.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 11">
            <text>2 glutathione + NADP(+) = glutathione disulfide + H(+) + NADPH</text>
            <dbReference type="Rhea" id="RHEA:11740"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:57925"/>
            <dbReference type="ChEBI" id="CHEBI:58297"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="EC" id="1.8.1.7"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="8">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
        <text evidence="8">Binds 1 FAD per subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 10">Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.</text>
    </comment>
    <dbReference type="EC" id="1.8.1.7" evidence="11"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66422.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670880.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00962"/>
    <dbReference type="EnsemblBacteria" id="CTQ66422">
        <property type="protein sequence ID" value="CTQ66422"/>
        <property type="gene ID" value="LAX5112_00962"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004362">
        <property type="term" value="F:glutathione-disulfide reductase (NADPH) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050661">
        <property type="term" value="F:NADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045454">
        <property type="term" value="P:cell redox homeostasis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006749">
        <property type="term" value="P:glutathione metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.390.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023753">
        <property type="entry name" value="FAD/NAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016156">
        <property type="entry name" value="FAD/NAD-linked_Rdtase_dimer_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006324">
        <property type="entry name" value="GSHR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001100">
        <property type="entry name" value="Pyr_nuc-diS_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004099">
        <property type="entry name" value="Pyr_nucl-diS_OxRdtase_dimer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012999">
        <property type="entry name" value="Pyr_OxRdtase_I_AS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07992">
        <property type="entry name" value="Pyr_redox_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02852">
        <property type="entry name" value="Pyr_redox_dim"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000350">
        <property type="entry name" value="Mercury_reductase_MerA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55424">
        <property type="entry name" value="SSF55424"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01424">
        <property type="entry name" value="gluta_reduc_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00076">
        <property type="entry name" value="PYRIDINE_REDOX_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 8 10" id="KW-0274">FAD</keyword>
    <keyword evidence="3 10" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="8" id="KW-0520">NAD</keyword>
    <keyword evidence="11" id="KW-0521">NADP</keyword>
    <keyword evidence="8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5 10 14" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6 10" id="KW-0676">Redox-active center</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Pyr_redox_2" evidence="13">
        <location>
            <begin position="6"/>
            <end position="321"/>
        </location>
    </feature>
    <feature type="domain" description="Pyr_redox_dim" evidence="12">
        <location>
            <begin position="341"/>
            <end position="449"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="7">
        <location>
            <position position="439"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="52"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="177"/>
            <end position="184"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="265"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="306"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="disulfide bond" description="Redox-active" evidence="9">
        <location>
            <begin position="43"/>
            <end position="48"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000669"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007532"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR000350-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR000350-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR000350-4"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU003691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU365040"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF02852"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF07992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="CTQ66422.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="458" mass="49826" checksum="A7EFA979CBE27406" modified="2015-12-09" version="1">MSDFDYDLFVIGGGSGGVRAARIAATHGARVGIAEEYRYGGTCVIRGCVPKKLFVYASKFSEEFEDAEGFGWSVGERSFAWDKLIAAKDQEITRLEGIYRRNLDNTGVEIHDSRAVIEDAHTIRLLSTGQTITAKYILVAVGASPNVDNSLPGGEHVITSNEAFHLSELPNRVVVAGGGYIAVEFAGIFNGLGVDTTLIYRGPEILRGFDMDLRRTVREEMEKKGIKVVLNDTFSSIEKQSDGSLIGRTKGGENMFADQIMFAIGRNPHTRDLGLEKAGVETDAVGAIKVNKDSRTSIESIYAVGDVTNRANLTPVAIREGHAFADTVFGNKPWTVDHSLIATAVFSQPEMGTVGLTQEQALERTPNLDIYKSSFRPMKHTLSGRDEKMLMKMIVDADSQKVLGVHIVGPDAGELAQVLGITLEMGATKADFDRTIAVHPTAAEELVTMREPTERLRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZW49</accession>
    <name>A0A0M6ZW49_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">HTH-type transcriptional regulator PuuR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">puuR</name>
        <name evidence="2" type="ORF">LAX5112_00984</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66481.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670895.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00984"/>
    <dbReference type="EnsemblBacteria" id="CTQ66481">
        <property type="protein sequence ID" value="CTQ66481"/>
        <property type="gene ID" value="LAX5112_00984"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01381">
        <property type="entry name" value="HTH_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00530">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="1">
        <location>
            <begin position="14"/>
            <end position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66481.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="186" mass="20074" checksum="D05DF82BC555D5B4" modified="2015-12-09" version="1">MTDSDILSRLPERLKKARRAQGLSLEAVEKLSGVSRSMVSQIERGESNPTVATLLNLTRALNVDFAGLLGEEAVEDRVEIVKVSQTPALDRAGDGCKIRILSAPQDAGRFEVYELIFTDGGKLESKPHERGTREQLIAEEGALKVMSGVATGTIEKGDTARYAADVAHTIEAVDGPARAILMVVRF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWD5</accession>
    <name>A0A0M6ZWD5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Cytosine deaminase</fullName>
            <ecNumber evidence="2">3.5.4.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">codA_2</name>
        <name evidence="2" type="ORF">LAX5112_00773</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.5.4.1" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65834.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670696.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00773"/>
    <dbReference type="EnsemblBacteria" id="CTQ65834">
        <property type="protein sequence ID" value="CTQ65834"/>
        <property type="gene ID" value="LAX5112_00773"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102480">
        <property type="term" value="F:5-fluorocytosine deaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004131">
        <property type="term" value="F:cytosine deaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013108">
        <property type="entry name" value="Amidohydro_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011059">
        <property type="entry name" value="Metal-dep_hydrolase_composite"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032466">
        <property type="entry name" value="Metal_Hydrolase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07969">
        <property type="entry name" value="Amidohydro_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51338">
        <property type="entry name" value="SSF51338"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51556">
        <property type="entry name" value="SSF51556"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Amidohydro_3" evidence="1">
        <location>
            <begin position="41"/>
            <end position="401"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07969"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65834.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="430" mass="47083" checksum="C23D10EACFD144B4" modified="2015-12-09" version="1">MSFDLLVKNANLPDGRTGIDIACQDGRIVAVEAGITADAAEVIDATAKLVSPPFVDSHFHMDATLSLGLPRMNQSGTLLEGIALWGELKEILTVDAVVERALKYCDLAVSQGLLAIRTHVDVCDDKLTGVQGLLEVREKVKDYIDLQLVAFPQDGLYRSPSAETNLLKALDMGVDIVGGIPHFERTMDDGAKSVRRLCEIAAERGLMVDMHCDETDDPMSRHIETLAYETQRLGLQGQVAGSHLTSMHSMDNYYVSKLLPLIAEAEVHAIANPLINITLQGRHDTYPKRRGQTRVPEMRSYGINVAFGHDCVMDPWYSMGSGDMLEVASMGLHVAQMTSREEIRYSYDCVTSHPAKAMGLEGYGLEKGCKADFVLLQARDTIEAIRLKAARLAVIKSGKVIATSEPRQTRLAIEGRPGLVNPADYAPKEH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWE4</accession>
    <name>A0A0M6ZWE4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Cysteine--tRNA ligase</fullName>
            <ecNumber evidence="11">6.1.1.16</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="11">Cysteinyl-tRNA synthetase</fullName>
            <shortName evidence="11">CysRS</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11 13" type="primary">cysS</name>
        <name evidence="13" type="ORF">LAX5112_00943</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 11">
            <text>ATP + L-cysteine + tRNA(Cys) = AMP + diphosphate + L-cysteinyl-tRNA(Cys)</text>
            <dbReference type="Rhea" id="RHEA:17773"/>
            <dbReference type="Rhea" id="RHEA-COMP:9661"/>
            <dbReference type="Rhea" id="RHEA-COMP:9679"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:35235"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78517"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.16"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="11">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="11">Binds 1 zinc ion per subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3 11">Monomer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="11">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 11">Belongs to the class-I aminoacyl-tRNA synthetase family.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.16" evidence="11"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66370.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670866.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00943"/>
    <dbReference type="EnsemblBacteria" id="CTQ66370">
        <property type="protein sequence ID" value="CTQ66370"/>
        <property type="gene ID" value="LAX5112_00943"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004817">
        <property type="term" value="F:cysteine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006423">
        <property type="term" value="P:cysteinyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00672">
        <property type="entry name" value="CysRS_core"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00041">
        <property type="entry name" value="Cys_tRNA_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015803">
        <property type="entry name" value="Cys-tRNA-ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015273">
        <property type="entry name" value="Cys-tRNA-synt_Ia_DALR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024909">
        <property type="entry name" value="Cys-tRNA/MSH_ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032678">
        <property type="entry name" value="tRNA-synt_1_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009080">
        <property type="entry name" value="tRNAsynth_Ia_anticodon-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10890">
        <property type="entry name" value="PTHR10890"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09190">
        <property type="entry name" value="DALR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01406">
        <property type="entry name" value="tRNA-synt_1e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00983">
        <property type="entry name" value="TRNASYNTHCYS"/>
    </dbReference>
    <dbReference type="SMART" id="SM00840">
        <property type="entry name" value="DALR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47323">
        <property type="entry name" value="SSF47323"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00435">
        <property type="entry name" value="cysS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10 11" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="8 11" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="11" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 11 13" id="KW-0436">Ligase</keyword>
    <keyword evidence="5 11" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6 11" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9 11" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 11" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="DALR_2" evidence="12">
        <location>
            <begin position="364"/>
            <end position="415"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="'HIGH' region" evidence="11">
        <location>
            <begin position="43"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="'KMSKS' region" evidence="11">
        <location>
            <begin position="291"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="41"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="233"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="258"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="262"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="294"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001080"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005594"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011245"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00041"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="SMART" id="SM00840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="CTQ66370.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="475" mass="52424" checksum="E4F910AB63776D12" modified="2015-12-09" version="1">MSAADPAKSGTFKGLKLTNTLTRQKEDFCAIDDSNVRLYVCGPTVYDFAHIGNARPAIVFDVLYRLLRHLYGAEHVTYARNITDVDDKINARALRDYPDMPLNEAIALVTKKTADQYQKDVAALGCLEPTVQPRATEHIDGMVKMIEQLIEKGHAYVAETPEGGEVLFDTVSMPNYGGLSKRKLDEQIAGARIAVDSHKKNPGDFVLWKLSSPEEPGWDSPWGRGRPGWHIECSVMSEHHLGKVFDIHGGGLDLIFPHHENEIAQSRCAHGTKTMSNYWVHNGFVQIEGKKMSKSEGNFFTIRELLETENFGGRKWPGEVLRLAMLMTHYKEPIDFSVRKLEEAENLLGKWPDLVETDAAPVADVLDAMNDDLNTAAAIQALHGLAGEANKDPHKLAEFSASAALLGLKPVAADMSGIDETAIATAITARLEALNGKNWAEADRIRDELASQGIALKDSKDSETGARVTTWELKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWE7</accession>
    <name>A0A0M6ZWE7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01204</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67078.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671043.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67078">
        <property type="protein sequence ID" value="CTQ67078"/>
        <property type="gene ID" value="LAX5112_01204"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809011" evidence="2">
        <location>
            <begin position="22"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="31"/>
            <end position="50"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ67078.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="162" mass="17781" checksum="85E9F0C688087F81" modified="2015-12-09" version="1">MIRFAFAALMALVLFPLPALAQTTVDFSPVIDQVISGVFAVVSFGVLWLGRQAIGAFQERTGIEIDEQFARRLDDALWKAVDFGRTKAYETAKKRSEINVRNEAIANALNYAMDAVPDTLNYFDIDQARLVDMIEARLGIDLDEDGDIGGAPTTDPNIKPAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWT6</accession>
    <name>A0A0M6ZWT6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01277</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67225.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671109.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67225">
        <property type="protein sequence ID" value="CTQ67225"/>
        <property type="gene ID" value="LAX5112_01277"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67225.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="72" mass="7651" checksum="A1984E1E0D3CF5EF" modified="2015-12-09" version="1">MASYIANNQSRDNVTIMLSRAEAEALNDLAGSAFDDTGHKMNGQKRAAAQRALDALGASTNTSARRAGYFDT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWU3</accession>
    <name>A0A0M6ZWU3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01048</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66662.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008194069.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01048"/>
    <dbReference type="EnsemblBacteria" id="CTQ66662">
        <property type="protein sequence ID" value="CTQ66662"/>
        <property type="gene ID" value="LAX5112_01048"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046161">
        <property type="entry name" value="DUF6163"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19660">
        <property type="entry name" value="DUF6163"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="51"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="85"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="113"/>
            <end position="130"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66662.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="139" mass="16173" checksum="2B86CDCC015AF5FD" modified="2015-12-09" version="1">MITSFQDLFYSRPPWSTVLIWYLRAMALLLMGGGVIYWARIIGIVEWRGMWFWEMPIAIQGAVVFFAVLDLVAAIGLWLTVSWGTVMWIFRCLCQIVMHTAFSDLYGRRPYEIAFYLLTILIFAGLTYLMRRENRTAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWW3</accession>
    <name>A0A0M6ZWW3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">EamA-like transporter family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01295</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67258.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01295"/>
    <dbReference type="EnsemblBacteria" id="CTQ67258">
        <property type="protein sequence ID" value="CTQ67258"/>
        <property type="gene ID" value="LAX5112_01295"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="9"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="38"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="71"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="97"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="123"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="153"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="182"/>
            <end position="199"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="219"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="246"/>
            <end position="266"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67258.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="310" mass="33222" checksum="81C52ECD757E87CB" modified="2015-12-09" version="1">MTKFNTEHLAMVAVAMSGLAWGLFWIPLRALDDHGISGVWAIVLFYLLPTLLLMPVILLRTQHLLQGGWSLHIAGIFAGVALVLYAGSLVFTDIVRALLFYYLTPLWSTLLARIVIGEAITRARWGTIGLALIGLLLILRIDAGSGGALRPGDWMGLASGLVWAIAAVWMKSDTNGNSLDFALSYFIWGSVAALALTLLPHGGSTPPPDWQAIRAVLPWIVPVILLLVIPPALAVMWGATVLSPGVLAILFMTEISAGTLTAAYWANEPFGIREIAGVALITSAGIFEPALKACRSKVLKSRLIKTAQVP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXI7</accession>
    <name>A0A0M6ZXI7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Acyl-CoA dehydrogenase</fullName>
            <ecNumber evidence="9">1.3.99.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">mmgC_1</name>
        <name evidence="9" type="ORF">LAX5112_01176</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 5">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the acyl-CoA dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.3.99.-" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67007.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671021.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01176"/>
    <dbReference type="EnsemblBacteria" id="CTQ67007">
        <property type="protein sequence ID" value="CTQ67007"/>
        <property type="gene ID" value="LAX5112_01176"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016627">
        <property type="term" value="F:oxidoreductase activity, acting on the CH-CH group of donors"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.540.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006091">
        <property type="entry name" value="Acyl-CoA_Oxase/DH_mid-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046373">
        <property type="entry name" value="Acyl-CoA_Oxase/DH_mid-dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036250">
        <property type="entry name" value="AcylCo_DH-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009075">
        <property type="entry name" value="AcylCo_DH/oxidase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013786">
        <property type="entry name" value="AcylCoA_DH/ox_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037069">
        <property type="entry name" value="AcylCoA_DH/ox_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009100">
        <property type="entry name" value="AcylCoA_DH/oxidase_NM_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00441">
        <property type="entry name" value="Acyl-CoA_dh_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02770">
        <property type="entry name" value="Acyl-CoA_dh_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02771">
        <property type="entry name" value="Acyl-CoA_dh_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47203">
        <property type="entry name" value="SSF47203"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56645">
        <property type="entry name" value="SSF56645"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0274">FAD</keyword>
    <keyword evidence="3 5" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="5 9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Acyl-CoA_dh_N" evidence="8">
        <location>
            <begin position="6"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="domain" description="Acyl-CoA_dh_M" evidence="7">
        <location>
            <begin position="125"/>
            <end position="219"/>
        </location>
    </feature>
    <feature type="domain" description="Acyl-CoA_dh_1" evidence="6">
        <location>
            <begin position="231"/>
            <end position="396"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009347"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU362125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00441"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF02770"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF02771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ67007.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="398" mass="43803" checksum="FD099271B59A7A99" modified="2015-12-09" version="1">MDLSYTPEEEAFRAEVRAFLSEKLPRHLSEKVRLGKRLTKSDMVSWHAILNAQGWLAPNWPKEYGGAAWDAVQRMIFEEEACLAHAPRIVPFGLSMLAPVLMAFGSEEQRQHYLPRILSGEDWWCQGYSEPGAGSDLAALKTRAVRDGDHYVVNGQKTWTTLGQHANWIFCLVRTDADAKKQEGISFLLIDMNTPGVTVRPIVLIDGEAEVNEVFFDDVRVPVENLVGEENKGWTYAKYLLTHERTNIAGVGFSNAALATLKHVAANTKSGGKPLDQNPYFAARMAQAEIDLMAMATTNLRVVSAAAKGQAPGPESSMLKIKGTVIRQELSSLLRRAAGPDAMPFLPDYLDGGDNVPAEGPEHAPAAAPNYFNMRKLSIFGGSNEIQRTIITKAILQL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZY45</accession>
    <name>A0A0M6ZY45_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01269</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67211.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67211">
        <property type="protein sequence ID" value="CTQ67211"/>
        <property type="gene ID" value="LAX5112_01269"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67211.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="58" mass="6631" checksum="0860D17B4D7C8934" modified="2015-12-09" version="1">MSKQQTYPEALRALNRAVYDTIGACRDTTEWPDVDRQFLRELATKTDRMVDDIAGKGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZY77</accession>
    <name>A0A0M6ZY77_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DUF1214 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01503</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67745.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01503"/>
    <dbReference type="EnsemblBacteria" id="CTQ67745">
        <property type="protein sequence ID" value="CTQ67745"/>
        <property type="gene ID" value="LAX5112_01503"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.600">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010621">
        <property type="entry name" value="DUF1214"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037049">
        <property type="entry name" value="DUF1214_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012038">
        <property type="entry name" value="UCP009471"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06742">
        <property type="entry name" value="DUF1214"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF009471">
        <property type="entry name" value="UCP009471"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="37"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="domain" description="DUF1214" evidence="2">
        <location>
            <begin position="104"/>
            <end position="206"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF06742"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ67745.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="228" mass="24502" checksum="4FF9ECD29DA2ACAE" modified="2015-12-09" version="1">MKQQSMRHAPGHVESGWHKELLPRAIRPERPHPLRTLVFLTSIIILGALIGVSSAYILIEREEPLDSISVGAWKAYPTAGTPDADPYSVAIYTRGGYIPLASGEGLSLTARTDSSGQALDPACSYRITGRTPTARLWTLTAVDGHGRLQQTMPGRTHLDSQNLLRRGDGSFDITASAQIKSGNWLPLPTNPAPGSGLRFVLRLYDAPVTTGAALDGVSVPDIDRISCP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZY80</accession>
    <name>A0A0M6ZY80_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Hypoxic response protein 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">hrp1_1</name>
        <name evidence="3" type="ORF">LAX5112_01451</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67609.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008190618.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01451"/>
    <dbReference type="EnsemblBacteria" id="CTQ67609">
        <property type="protein sequence ID" value="CTQ67609"/>
        <property type="gene ID" value="LAX5112_01451"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd04623">
        <property type="entry name" value="CBS_pair_bac_euk"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.580.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000644">
        <property type="entry name" value="CBS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046342">
        <property type="entry name" value="CBS_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044725">
        <property type="entry name" value="CBSX3_CBS_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00571">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00116">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54631">
        <property type="entry name" value="SSF54631"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51371">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0129">CBS domain</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CBS" evidence="2">
        <location>
            <begin position="7"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="domain" description="CBS" evidence="2">
        <location>
            <begin position="76"/>
            <end position="134"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00703"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51371"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ67609.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="143" mass="15459" checksum="D936D6D7E4DC11BC" modified="2015-12-09" version="1">MTVAAIMKTKGHDTITADKSAPVSEIAEILAKNKIGAVVLCDGDRHIEGIVSERDVVRLVGLQGASALSQPVSSIMTKDVMTCTEMDAANEVMGRMNRGRFRHMPVVEDGKLIGVISIGDVVKHKIAQVEHEAEQMRSYITTT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYF1</accession>
    <name>A0A0M6ZYF1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01343</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67347.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671158.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67347">
        <property type="protein sequence ID" value="CTQ67347"/>
        <property type="gene ID" value="LAX5112_01343"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="70"/>
            <end position="90"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67347.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="330" mass="36192" checksum="6134CBACA0D04F6B" modified="2015-12-09" version="1">MSDAETTQKAQIQSDTKHVYFYLPRISENESDVPDNIDLGAIFRLGGYCELEEKANGIEEDTEHYYPKKHIEDEGGAGSEDVYEKAAGPSPQSSHGILLACDGRMLVKAGEKYYMQTGDQNIDVEGDYELETTGKIDLSAEGTVKIESGTNQSITLDAGSETGTIYIQGKEQQTKILGHSYELITENSYEVVHANRYEFFAGGKVEMVTGGCLEMNLAAICSISLSAALEMNLLINIEIATIEVFFKKVEFDIAEMKVVVPATKAEITELETHMTALGTRISDVQADVTPLQTKTSEIEVAARELKTDLGEFKMSTTNAMVAMSNMIVNM</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYP5</accession>
    <name>A0A0M6ZYP5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01395</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67447.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671196.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67447">
        <property type="protein sequence ID" value="CTQ67447"/>
        <property type="gene ID" value="LAX5112_01395"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67447.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="104" mass="11435" checksum="7E80F3A905588BBE" modified="2015-12-09" version="1">MTSAIEQGIEEFIQKHEQQSVFNGAVTSPGNHIYSVVAGKRGANGIIFILIVQSYSPIPINLHNDYAEFYDQNGTKASGAVEFSSTINRQTGNTFNSTTYIIFQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYQ2</accession>
    <name>A0A0M6ZYQ2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">HEPN_AbiU2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01246</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67170.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671082.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67170">
        <property type="protein sequence ID" value="CTQ67170"/>
        <property type="gene ID" value="LAX5112_01246"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040704">
        <property type="entry name" value="HEPN_AbiU2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18734">
        <property type="entry name" value="HEPN_AbiU2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HEPN_AbiU2" evidence="2">
        <location>
            <begin position="55"/>
            <end position="250"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="273"/>
            <end position="301"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="275"/>
            <end position="301"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF18734"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ67170.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="301" mass="34865" checksum="1AE4FBF742212FC4" modified="2015-12-09" version="1">MKLKEIWSVLLSWACKHLTRLARKCDRRPWDGWTPEQRLDRAKEVTRKCVDLINLNIALNEANKVIAYSQDFRDQINLPQSKAGHALSLLVDTSLHYEFIRLSALWDSAAENQYSIPTIVELIAPKEVQRLIVDAMPGGLPGNFSQKDEQSQQYWLKKSDEAKAERQAEARVILKKRIKQVRQMTGDRDLRGFRQLRNQHLAHALERLKNVDPSKKLPAILGKETELLSKTCEILDDLYGVVNGSGFTSEKAYRDMWRPRIEELWLNCRFDVPTPDEPPRARSVEERLQKLKEVDPKEGDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZE3</accession>
    <name>A0A0M6ZZE3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01382</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67420.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451743.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67420">
        <property type="protein sequence ID" value="CTQ67420"/>
        <property type="gene ID" value="LAX5112_01382"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.280.50">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007420">
        <property type="entry name" value="DUF465"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038444">
        <property type="entry name" value="DUF465_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04325">
        <property type="entry name" value="DUF465"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67420.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="84" mass="9390" checksum="E4570F85552951BA" modified="2015-12-09" version="1">MSHVPHELHEEFPDAADALHTLKTTDAHFARLAEEYHTINREVHRIETDVTPASDEVLEDLKKKRLHLKDQIAAMLAAAANAGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZH1</accession>
    <name>A0A0M6ZZH1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Alanine--tRNA ligase</fullName>
            <ecNumber evidence="11">6.1.1.7</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="11">Alanyl-tRNA synthetase</fullName>
            <shortName evidence="11">AlaRS</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="14" type="primary">alaS_2</name>
        <name evidence="11" type="synonym">alaS</name>
        <name evidence="14" type="ORF">LAX5112_01641</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11">Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="11">
            <text>ATP + L-alanine + tRNA(Ala) = AMP + diphosphate + L-alanyl-tRNA(Ala)</text>
            <dbReference type="Rhea" id="RHEA:12540"/>
            <dbReference type="Rhea" id="RHEA-COMP:9657"/>
            <dbReference type="Rhea" id="RHEA-COMP:9923"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57972"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78497"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.7"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="11">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="11">Binds 1 zinc ion per subunit.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="11">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="domain">
        <text evidence="11">Consists of three domains; the N-terminal catalytic domain, the editing domain and the C-terminal C-Ala domain. The editing domain removes incorrectly charged amino acids, while the C-Ala domain, along with tRNA(Ala), serves as a bridge to cooperatively bring together the editing and aminoacylation centers thus stimulating deacylation of misacylated tRNAs.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 11">Belongs to the class-II aminoacyl-tRNA synthetase family.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.7" evidence="11"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68115.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671409.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01641"/>
    <dbReference type="EnsemblBacteria" id="CTQ68115">
        <property type="protein sequence ID" value="CTQ68115"/>
        <property type="gene ID" value="LAX5112_01641"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004813">
        <property type="term" value="F:alanine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006419">
        <property type="term" value="P:alanyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.930.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00036_B">
        <property type="entry name" value="Ala_tRNA_synth_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045864">
        <property type="entry name" value="aa-tRNA-synth_II/BPL/LPL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002318">
        <property type="entry name" value="Ala-tRNA-lgiase_IIc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018162">
        <property type="entry name" value="Ala-tRNA-ligase_IIc_anticod-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018165">
        <property type="entry name" value="Ala-tRNA-synth_IIc_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018164">
        <property type="entry name" value="Ala-tRNA-synth_IIc_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023033">
        <property type="entry name" value="Ala_tRNA_ligase_euk/bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003156">
        <property type="entry name" value="DHHA1_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018163">
        <property type="entry name" value="Thr/Ala-tRNA-synth_IIc_edit"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009000">
        <property type="entry name" value="Transl_B-barrel_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012947">
        <property type="entry name" value="tRNA_SAD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02272">
        <property type="entry name" value="DHHA1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01411">
        <property type="entry name" value="tRNA-synt_2c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07973">
        <property type="entry name" value="tRNA_SAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00980">
        <property type="entry name" value="TRNASYNTHALA"/>
    </dbReference>
    <dbReference type="SMART" id="SM00863">
        <property type="entry name" value="tRNA_SAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101353">
        <property type="entry name" value="SSF101353"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50447">
        <property type="entry name" value="SSF50447"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55186">
        <property type="entry name" value="SSF55186"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55681">
        <property type="entry name" value="SSF55681"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00344">
        <property type="entry name" value="alaS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50860">
        <property type="entry name" value="AA_TRNA_LIGASE_II_ALA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10 11" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="7 11" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="11" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 11 14" id="KW-0436">Ligase</keyword>
    <keyword evidence="4 11" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5 11" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9 11" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 11" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="2 11" id="KW-0820">tRNA-binding</keyword>
    <keyword evidence="6 11" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="AA_TRNA_LIGASE_II_ALA" evidence="13">
        <location>
            <begin position="2"/>
            <end position="718"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="12">
        <location>
            <begin position="850"/>
            <end position="872"/>
        </location>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="563"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="567"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="675"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="679"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008226"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00036"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS50860"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="CTQ68115.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="885" mass="95650" checksum="2BDE696C36399B40" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZL3</accession>
    <name>A0A0M6ZZL3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Rhomboid family protease GlpG</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">LAX5112_01452</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67612.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01452"/>
    <dbReference type="EnsemblBacteria" id="CTQ67612">
        <property type="protein sequence ID" value="CTQ67612"/>
        <property type="gene ID" value="LAX5112_01452"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004252">
        <property type="term" value="F:serine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1540.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022764">
        <property type="entry name" value="Peptidase_S54_rhomboid_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035952">
        <property type="entry name" value="Rhomboid-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01694">
        <property type="entry name" value="Rhomboid"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF144091">
        <property type="entry name" value="SSF144091"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-0645">Protease</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="32"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="90"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="129"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="155"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="207"/>
            <end position="226"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="232"/>
            <end position="251"/>
        </location>
    </feature>
    <feature type="domain" description="Rhomboid" evidence="7">
        <location>
            <begin position="88"/>
            <end position="249"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF01694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ67612.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="260" mass="28797" checksum="817080A16DBC44CC" modified="2015-12-09" version="1">MNVYQFDEERKRRDEETKQREREQRPSEPPALNLPAAIIWLSVALIAIHVVRTFVIPTGWNNMMLYFLAFWPVKYTALSSLQAMDLASSIWAFVSYSFLHGGAMHLTFNLLWMAIFGSAVVRRFGLGRFLAFSALCSVGGAFAHLATHWGESAPMIGASAAISGHMAAAIRFVFEMGGPLGVFRRSDRGAYFVPAQPLSECFRNQQVLVFVGVWFGLNIFFGLTSGGQAGSIAWQAHIGGFVAGLALFPLFDPVPQRRGW</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZY3</accession>
    <name>A0A0M6ZZY3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DNA-binding transcriptional repressor MarR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01704</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68348.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ68348">
        <property type="protein sequence ID" value="CTQ68348"/>
        <property type="gene ID" value="LAX5112_01704"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000835">
        <property type="entry name" value="HTH_MarR-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12802">
        <property type="entry name" value="MarR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00598">
        <property type="entry name" value="HTHMARR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00347">
        <property type="entry name" value="HTH_MARR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50995">
        <property type="entry name" value="HTH_MARR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH marR-type" evidence="1">
        <location>
            <begin position="15"/>
            <end position="152"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68348.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="166" mass="17993" checksum="835767A146618F16" modified="2015-12-09" version="1">MNTSLDDIDFREMGRLCLGHSVRQTANLLTRHFNRYLAPLGLEITQAQLMAVIASGDALSSSDIARYLGIDRSTLARNLKPLEAAGLIERHKLGGRKVASRLTERGVTLTAEVHAAWEQAQRDLTNELGAETADAIRGHLSGLRKTVRALETVAKKPPARPGGTSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A061</accession>
    <name>A0A0M7A061_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">50S ribosomal protein L7/L12</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4 7" type="primary">rplL</name>
        <name evidence="7" type="ORF">LAX5112_01716</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Homodimer. Part of the ribosomal stalk of the 50S ribosomal subunit. Forms a multimeric L10(L12)X complex, where L10 forms an elongated spine to which 2 to 4 L12 dimers bind in a sequential fashion. Binds GTP-bound translation factors.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the bacterial ribosomal protein bL12 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68375.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008197256.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01716"/>
    <dbReference type="EnsemblBacteria" id="CTQ68375">
        <property type="protein sequence ID" value="CTQ68375"/>
        <property type="gene ID" value="LAX5112_01716"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00387">
        <property type="entry name" value="Ribosomal_L7_L12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.710">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1390.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00368">
        <property type="entry name" value="Ribosomal_L7_L12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000206">
        <property type="entry name" value="Ribosomal_L7/12"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014719">
        <property type="entry name" value="Ribosomal_L7/12_C/ClpS-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013823">
        <property type="entry name" value="Ribosomal_L7/L12_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008932">
        <property type="entry name" value="Ribosomal_L7/L12_oligo"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036235">
        <property type="entry name" value="Ribosomal_L7/L12_oligo_N_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45987">
        <property type="entry name" value="PTHR45987"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00542">
        <property type="entry name" value="Ribosomal_L12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16320">
        <property type="entry name" value="Ribosomal_L12_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48300">
        <property type="entry name" value="SSF48300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54736">
        <property type="entry name" value="SSF54736"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00855">
        <property type="entry name" value="L12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4 7" id="KW-0689">Ribosomal protein</keyword>
    <feature type="domain" description="Ribosomal_L12_N" evidence="6">
        <location>
            <begin position="4"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="domain" description="Ribosomal_L12" evidence="5">
        <location>
            <begin position="58"/>
            <end position="124"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007197"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00368"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00542"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF16320"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ68375.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="124" mass="12860" checksum="E0FBA62B5EEDB719" modified="2015-12-09" version="1">MADLEKLVEELSALTVMEAAELSKLLEEKWGVSAAAPVAVAAAAGGGEAAAAEEKTEFDVVLASAGDKKINVIKEVRAITGLGLKEAKELVESAPKAVKEAVSKDEAEELKKKLEEAGASVELK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0Y2</accession>
    <name>A0A0M7A0Y2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Putative oxidoreductase/MSMEI_2347</fullName>
            <ecNumber evidence="5">1.-.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">LAX5112_01821</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.-.-.-" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68645.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671669.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01821"/>
    <dbReference type="EnsemblBacteria" id="CTQ68645">
        <property type="protein sequence ID" value="CTQ68645"/>
        <property type="gene ID" value="LAX5112_01821"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020471">
        <property type="entry name" value="AKR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018170">
        <property type="entry name" value="Aldo/ket_reductase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023210">
        <property type="entry name" value="NADP_OxRdtase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036812">
        <property type="entry name" value="NADP_OxRdtase_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43827">
        <property type="entry name" value="PTHR43827"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00248">
        <property type="entry name" value="Aldo_ket_red"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000097">
        <property type="entry name" value="AKR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00069">
        <property type="entry name" value="ALDKETRDTASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51430">
        <property type="entry name" value="SSF51430"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00062">
        <property type="entry name" value="ALDOKETO_REDUCTASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00063">
        <property type="entry name" value="ALDOKETO_REDUCTASE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aldo_ket_red" evidence="4">
        <location>
            <begin position="14"/>
            <end position="193"/>
        </location>
    </feature>
    <feature type="domain" description="Aldo_ket_red" evidence="4">
        <location>
            <begin position="197"/>
            <end position="256"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="1">
        <location>
            <position position="47"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="105"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="site" description="Lowers pKa of active site Tyr" evidence="3">
        <location>
            <position position="72"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRSR" id="PIRSR000097-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR000097-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR000097-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00248"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ68645.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="275" mass="30464" checksum="1CCB69D3CF835F50" modified="2015-12-09" version="1">MIFRSIRDVSIPAIGLGTWDLRGSQCAQTVSFALQNGYSHVDTAAYYENESEVGDGIRASNMNRSDLFLTTKVWWDQLAADAFRTSAETSLRKLQTDYVDLLLVHWPNSDIPLAETIGALVEAKTRGLARSIGVSNFPSALLRQAQDLAGGQLVTNQVEYHPFLSQRTLLQATQDLGMALTAYCPIVKGRVDQEGLFRDLAEKYGKSPVQITLRWHVQQPNVIAIPKSSNPDRLKANIEIFDFELDSDEMAQISALGSPEGRLINAAWGPVWDPE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A110</accession>
    <name>A0A0M7A110_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Dihydroorotase</fullName>
            <ecNumber evidence="2">3.5.2.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">pyrC_1</name>
        <name evidence="2" type="ORF">LAX5112_01865</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.5.2.3" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68728.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671568.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01865"/>
    <dbReference type="EnsemblBacteria" id="CTQ68728">
        <property type="protein sequence ID" value="CTQ68728"/>
        <property type="gene ID" value="LAX5112_01865"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004151">
        <property type="term" value="F:dihydroorotase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006221">
        <property type="term" value="P:pyrimidine nucleotide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01317">
        <property type="entry name" value="DHOase_IIa"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006680">
        <property type="entry name" value="Amidohydro-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004722">
        <property type="entry name" value="DHOase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011059">
        <property type="entry name" value="Metal-dep_hydrolase_composite"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032466">
        <property type="entry name" value="Metal_Hydrolase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01979">
        <property type="entry name" value="Amidohydro_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51338">
        <property type="entry name" value="SSF51338"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51556">
        <property type="entry name" value="SSF51556"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Amidohydro-rel" evidence="1">
        <location>
            <begin position="62"/>
            <end position="429"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01979"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68728.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="433" mass="46077" checksum="0EBC7D5F9BCA4504" modified="2015-12-09" version="1">MALDTPKPLVLSNARVLDPARDLDAPGSIIIADGTILAAGPEAANQGAPYGAELIDCKGAIACPGLIDMCVSVGEPGAEHRETLASASEAAAAGGITTICTMPDTDPVIDDPALVDFIHRRARDTASVNVLPLAALTKGLAGVEMTEIGLLKEAGAVAFSNGHKSVQNPQILRRIMTYARDFDALVIHHTEDPALAGGVMNAGLYASWKGLSGVPREAEIIMLERDLRLVGMSKGKYHANLISTSESADIIRTGKDRGLNITAGISINHLTHNENDIGAYRTFFKMSPPLRDEDDRQAMIAAIADGTIDIICSNHDPQDVETKRHPWAEAEDGAIGLETLLAASLRLYHAEQVDLKTLLAAMTCNPADRLGLETGRLSKGAPADVTVFDLDRPWVLEKSAIRSRSKNSPFEDARFSGRVMRTVVGGKTVFAHG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1A6</accession>
    <name>A0A0M7A1A6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">TRAP transporter solute receptor, TAXI family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01814</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68629.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671533.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01814"/>
    <dbReference type="EnsemblBacteria" id="CTQ68629">
        <property type="protein sequence ID" value="CTQ68629"/>
        <property type="gene ID" value="LAX5112_01814"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011852">
        <property type="entry name" value="TRAP_TAXI"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42941">
        <property type="entry name" value="PTHR42941"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16868">
        <property type="entry name" value="NMT1_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02122">
        <property type="entry name" value="TRAP_TAXI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0675">Receptor</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809390" evidence="1">
        <location>
            <begin position="24"/>
            <end position="318"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68629.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="318" mass="33799" checksum="E7C140DBD4FF4422" modified="2015-12-09" version="1">MKSGLLKLAIGLSLSFGAVQAQAETRITYKSAKSTSSYYQMGVQIAEAVKEGSNGELIVTVEESQGSVQNVMEARARGGDYVFTTPPVLVRLAQGGKAMFEGKGDPKFDEIRALFPIPSLTMHFVMSEKSGVTDFAGMEGKTILLGKGSFGAREGEKYLKLFGLEGKVDLAEVELSNAVAALKNGQIDGFVTAGSWPAPNVIEAAASTGVNVISLSDDQIAQSKRAKLVIPAGTYAGQSEDITTTSLPVVAFTTTAMDDDTAYALTKTFWEQKAKMGEGAAWWNGVDQGLMENITGKIHPGAVRYYQEAGIDLTDAQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1K4</accession>
    <name>A0A0M7A1K4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Protein translocase subunit SecY</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">secY</name>
        <name evidence="11" type="ORF">LAX5112_01746</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.</text>
    </comment>
    <comment type="subunit">
        <text evidence="9">Component of the Sec protein translocase complex. Heterotrimer consisting of SecY, SecE and SecG subunits. The heterotrimers can form oligomers, although 1 heterotrimer is thought to be able to translocate proteins. Interacts with the ribosome. Interacts with SecDF, and other proteins may be involved. Interacts with SecA.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cell membrane</location>
            <topology evidence="9">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 9 10">Belongs to the SecY/SEC61-alpha family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68457.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008193531.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01746"/>
    <dbReference type="EnsemblBacteria" id="CTQ68457">
        <property type="protein sequence ID" value="CTQ68457"/>
        <property type="gene ID" value="LAX5112_01746"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0065002">
        <property type="term" value="P:intracellular protein transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006605">
        <property type="term" value="P:protein targeting"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043952">
        <property type="term" value="P:protein transport by the Sec complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3370.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01465">
        <property type="entry name" value="SecY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026593">
        <property type="entry name" value="SecY"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002208">
        <property type="entry name" value="SecY/SEC61-alpha"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030659">
        <property type="entry name" value="SecY_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023201">
        <property type="entry name" value="SecY_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10906">
        <property type="entry name" value="PTHR10906"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00344">
        <property type="entry name" value="SecY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004557">
        <property type="entry name" value="SecY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103491">
        <property type="entry name" value="SSF103491"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00967">
        <property type="entry name" value="3a0501s007"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00756">
        <property type="entry name" value="SECY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="5 9" id="KW-0653">Protein transport</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 9" id="KW-0811">Translocation</keyword>
    <keyword evidence="4 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3 9" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="27"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="123"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="155"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="187"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="216"/>
            <end position="237"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="275"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="316"/>
            <end position="337"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="369"/>
            <end position="391"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="397"/>
            <end position="417"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005751"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023010"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01465"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU004349"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ68457.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="443" mass="48026" checksum="43D30BC8844773E1" modified="2015-12-09" version="1">MASAAEQLASNLNFSAFAKAEELKKRIWFTLGALLVYRLGTYIPMPGINPEAFAQAFNQAQSGIIGMFNMFAGGAVERMAIFALGIMPYISASIIMQLMTTVVPSLEQLKKEGEQGRKVINQYTRYGTVVLAAFQAYGIAVGLEGATNVVTDPGWFFRASTVITLVGGTMFLMWLGEQITSRGIGNGISLIIFAGIVAGLPSAIVQTLELGRQGSLATGIILAVILLAIVVIAFIVFMERAQRRLLIQYPKRQMGNRMFEGNTSFLPLKLNTAGVIPPIFASSLLLVPATISGFNAGGGNEWLTTITALLGHGQPLFMVFYAAMIIFFCFFYTAIVFNPSDTADNLKKHGGFIPGIRPGERTAQYIDFVLTRITVVGAIYITIVCLLPEFLISATGVPFYFGGTSLLIVVSVTMDTVSQIQGHLLAHQYEGLVKKSKLRGKRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1W1</accession>
    <name>A0A0M7A1W1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 5">30S ribosomal protein S13</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 8" type="primary">rpsM</name>
        <name evidence="8" type="ORF">LAX5112_01748</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Part of the 30S ribosomal subunit. Forms a loose heterodimer with protein S19. Forms two bridges to the 50S subunit in the 70S ribosome.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 5 6">Belongs to the universal ribosomal protein uS13 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68462.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040452236.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01748"/>
    <dbReference type="EnsemblBacteria" id="CTQ68462">
        <property type="protein sequence ID" value="CTQ68462"/>
        <property type="gene ID" value="LAX5112_01748"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.910.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01315">
        <property type="entry name" value="Ribosomal_S13_S18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027437">
        <property type="entry name" value="30s_Rbsml_prot_S13_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001892">
        <property type="entry name" value="Ribosomal_S13"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010979">
        <property type="entry name" value="Ribosomal_S13-like_H2TH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019980">
        <property type="entry name" value="Ribosomal_S13_bac-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018269">
        <property type="entry name" value="Ribosomal_S13_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10871:SF1">
        <property type="entry name" value="PTHR10871:SF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00416">
        <property type="entry name" value="Ribosomal_S13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002134">
        <property type="entry name" value="Ribosomal_S13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46946">
        <property type="entry name" value="SSF46946"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03631">
        <property type="entry name" value="uS13_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00646">
        <property type="entry name" value="RIBOSOMAL_S13_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50159">
        <property type="entry name" value="RIBOSOMAL_S13_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 5 6" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 5 6" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="5" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="5" id="KW-0699">rRNA-binding</keyword>
    <keyword evidence="5" id="KW-0820">tRNA-binding</keyword>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="95"/>
            <end position="122"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008080"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00029533"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003830"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ68462.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="122" mass="13830" checksum="BC36F78A08F53562" modified="2015-12-09" version="1">MARIAGVNIPTNKRVVIALQYIHGIGAKFAQEIVEKNSIDAARRVNELSDAEVLQIRETIDRDYMVEGDLRRETAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKPIAGKKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A236</accession>
    <name>A0A0M7A236_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Peptidoglycan lytic exotransglycosylase</fullName>
            <ecNumber evidence="2">4.2.2.n1</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Murein hydrolase A</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="primary">mltA</name>
        <name evidence="7" type="ORF">LAX5112_02001</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>Exolytic cleavage of the (1-&gt;4)-beta-glycosidic linkage between N-acetylmuramic acid (MurNAc) and N-acetylglucosamine (GlcNAc) residues in peptidoglycan, from either the reducing or the non-reducing ends of the peptidoglycan chains, with concomitant formation of a 1,6-anhydrobond in the MurNAc residue.</text>
            <dbReference type="EC" id="4.2.2.n1"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="4.2.2.n1" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69148.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671699.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02001"/>
    <dbReference type="EnsemblBacteria" id="CTQ69148">
        <property type="protein sequence ID" value="CTQ69148"/>
        <property type="gene ID" value="LAX5112_02001"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019867">
        <property type="term" value="C:outer membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004553">
        <property type="term" value="F:hydrolase activity, hydrolyzing O-glycosyl compounds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009254">
        <property type="term" value="P:peptidoglycan turnover"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd14485">
        <property type="entry name" value="mltA_like_LT_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010611">
        <property type="entry name" value="3D_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026044">
        <property type="entry name" value="MltA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034654">
        <property type="entry name" value="MltA_3D"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005300">
        <property type="entry name" value="MltA_B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036908">
        <property type="entry name" value="RlpA-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30124">
        <property type="entry name" value="PTHR30124"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06725">
        <property type="entry name" value="3D"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03562">
        <property type="entry name" value="MltA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF019422">
        <property type="entry name" value="MltA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00925">
        <property type="entry name" value="MltA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50685">
        <property type="entry name" value="SSF50685"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="3 7" id="KW-0456">Lyase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MltA" evidence="6">
        <location>
            <begin position="97"/>
            <end position="254"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001420"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012587"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00030918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM00925"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ69148.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="363" mass="39570" checksum="109E2039AB79137E" modified="2015-12-09" version="1">MAQGPIQSADLTPVQFADLIGWSTDQHADALVAFKRFCGSGAPSAANRGPFQLSKDHRNALCKAAQASKDARSFFETHFEPFQVREPGFVTGYFEPEVAGSREKTAEFNVPLLKKPDGLVHVPAKARPSGWPRHLTHGRKINGQVTEMPDRGAIMDGALDGEDLELVWLRSPIDAYFIHVQGSARLKLSDGTTMRVGYAGKTGHPYTGIARLLVQRGEGSPEDFTMSGLRRWLEQNPDERNLLFKENQSYIFFREVTEAATNEGPIGAAGLPLVPGRSLAIDDSAMPYGMPVFVSAEFEDLQRPGKQYRRLMVADDTGSAIKGQSRGDIFVGSGDDAGRIAGEIRHGATFTVLLPRRSTGLGN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2T8</accession>
    <name>A0A0M7A2T8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02092</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69378.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02092"/>
    <dbReference type="EnsemblBacteria" id="CTQ69378">
        <property type="protein sequence ID" value="CTQ69378"/>
        <property type="gene ID" value="LAX5112_02092"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809413" evidence="1">
        <location>
            <begin position="23"/>
            <end position="139"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69378.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="139" mass="14393" checksum="B2A91425C8653123" modified="2015-12-09" version="1">MKYLLSAVAAGMIFAAGMTAQAQTVGFADAIKILAGSCGSDIDKYCKSATLANNGIGQCLDQNQAKVSQKCNADRVVVANLIAERLAAQKAAPDLCARDATQFCKGVKPGAGHILRCLLKAQPSVSAKCNTAIDLAGYR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3C7</accession>
    <name>A0A0M7A3C7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">RNA polymerase-binding transcription factor CarD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">carD</name>
        <name evidence="3" type="ORF">LAX5112_02167</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69568.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008196212.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02167"/>
    <dbReference type="EnsemblBacteria" id="CTQ69568">
        <property type="protein sequence ID" value="CTQ69568"/>
        <property type="gene ID" value="LAX5112_02167"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.1290">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036101">
        <property type="entry name" value="CarD-like/TRCF_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003711">
        <property type="entry name" value="CarD-like/TRCF_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042215">
        <property type="entry name" value="CarD-like_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02559">
        <property type="entry name" value="CarD_CdnL_TRCF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01058">
        <property type="entry name" value="CarD_TRCF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141259">
        <property type="entry name" value="SSF141259"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CarD_TRCF" evidence="2">
        <location>
            <begin position="13"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="179"/>
            <end position="199"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM01058"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ69568.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="199" mass="21807" checksum="A06EFB04D760E144" modified="2015-12-09" version="1">MATNTKKTAQRQGFKTGEYIVYPAHGVGQITAIEEQNVAGHSLELLVIVFEQDKMTLRVPVAKIASVGMRKLGDPAAVKKALETVQGRPRIKRTMWSRRAQEYEAKINSGDLIAISEVVRDLFRSESQPEQSYSERQLYEAALDRMAREIAAVNKCSETEAIKEIEQNLAKSPSRIKAAAAAAAAAEGDEDGDDTEEAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3H9</accession>
    <name>A0A0M7A3H9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Neu5Ac permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">siaT_15</name>
        <name evidence="5" type="ORF">LAX5112_02114</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69439.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451113.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02114"/>
    <dbReference type="EnsemblBacteria" id="CTQ69439">
        <property type="protein sequence ID" value="CTQ69439"/>
        <property type="gene ID" value="LAX5112_02114"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010656">
        <property type="entry name" value="DctM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004681">
        <property type="entry name" value="TRAP_DctM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33362">
        <property type="entry name" value="PTHR33362"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06808">
        <property type="entry name" value="DctM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006066">
        <property type="entry name" value="HI0050"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00786">
        <property type="entry name" value="dctM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="21"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="61"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="149"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="185"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="227"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="260"/>
            <end position="279"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="291"/>
            <end position="312"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="332"/>
            <end position="360"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="372"/>
            <end position="393"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="413"/>
            <end position="438"/>
        </location>
    </feature>
    <feature type="domain" description="DctM" evidence="4">
        <location>
            <begin position="22"/>
            <end position="433"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF06808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ69439.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="443" mass="46373" checksum="ABF45E689E980AE4" modified="2015-12-09" version="1">MLWQHMQPQTIELGWDFYGPVLLFVLLVALAVPVWAAIGAAASLMLVWSGALPLSLVGEKLFSGIDAFALTAVPLFILTGDALVRTGLSRKFLDVAEALTQFAKGGFGSATVLVCGMFAAISGSDAAGAAAVGRMTIDRLVESGYPRPYACALVAAGACTGILIPPSIAYIIIGLVLGISASTLFLAAVIPGIAILVSILATNIIMNRLYGWEGGGNISMGEYFSQLWVAIKSGWYAFIVPIIIFYGIFSGRLTPTEAGATAVVVTIAMGFILGTMRLSDFPAMLVSSAKVNGVIIPIIAFSIPLAEALAIIGVPQGFVAVATGISDEPWVLIMMMILVLIAAGCVMETTPNIVILAPILKPLADNIGMNEIQFCIMMITALGVGFITPPLGLNLFVVSGLTGESILKIAARAIPFVLFMLAVTLLIAYVPAISTTLLPEIYK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A550</accession>
    <name>A0A0M7A550_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Hemolysin IA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">apxIA_1</name>
        <name evidence="1" type="ORF">LAX5112_01870</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68744.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671571.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01870"/>
    <dbReference type="EnsemblBacteria" id="CTQ68744">
        <property type="protein sequence ID" value="CTQ68744"/>
        <property type="gene ID" value="LAX5112_01870"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.150.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043708">
        <property type="entry name" value="DUF5648"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018511">
        <property type="entry name" value="Hemolysin-typ_Ca-bd_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001343">
        <property type="entry name" value="Hemolysn_Ca-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011049">
        <property type="entry name" value="Serralysin-like_metalloprot_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18885">
        <property type="entry name" value="DUF5648"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00353">
        <property type="entry name" value="HemolysinCabind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51120">
        <property type="entry name" value="SSF51120"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00330">
        <property type="entry name" value="HEMOLYSIN_CALCIUM"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ68744.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="487" mass="52735" checksum="3CDF67A444FA6DBB" modified="2015-12-09" version="1">MTNLSSEEIFKVLLGTEHAGNTATVYRVSFAVPNSLLGQSQGGNNSGFSFGIVQLDAGSNSFAQSAFTLILQTARDTGSLTSSQFTHLSQYVGASRPDLNPGLSSTYAADRAFLNDTIFGQQYARDIVDQYSQLYIESSLLPTLTTFLDTMEDRWGTGTAFNSNHPDYASALAMITSIANRFGSIRETTAHFLDTEPSSLAVVKARFDQLAATTVVEPEDWDLVLIGAELWQSTFGTTNGDDILQGTAGHDSLFGGNGNDQLTGGLGDDVLDGGNGTDTVVFSGTREQYAVFAGSDGRIMVADTVANRDGRDFAANFETIQFSGATLDITTALIEPSDTDNSAFQIYRFYNSDTGAHFFTSSVEERNAVIETLPSFVYEGNSYDSNVSADDGTAVYRFYNADTGVHFYTASEAERDTVLDQLPSYSLEGISYFASPDDSNGGQALYRFYNTSNGTHFYTVSEAERDAIIQTLGHYSYEGIAYFVEFA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5Z3</accession>
    <name>A0A0M7A5Z3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Suppressor of F exclusion of phage T7</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">fxsA</name>
        <name evidence="3" type="ORF">LAX5112_02003</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69153.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671700.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02003"/>
    <dbReference type="EnsemblBacteria" id="CTQ69153">
        <property type="protein sequence ID" value="CTQ69153"/>
        <property type="gene ID" value="LAX5112_02003"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007313">
        <property type="entry name" value="FxsA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35335">
        <property type="entry name" value="PTHR35335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04186">
        <property type="entry name" value="FxsA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="5"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="29"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="76"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="130"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="130"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="149"/>
            <end position="173"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ69153.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="173" mass="18617" checksum="5DB6AE7DEEEC06EE" modified="2015-12-09" version="1">MGLYIIAGIILLPLIEISVFIWVGELLGVLPTILLTVLTAMAGTLMLRQQGLSLLMRMQKELDGGRAPGNEVMQGAMIVLASILLLIPGFVTDAIGLLLFIPPVRESLAKFIIARSNVVIMEGGTMRPRNEDGVVDLDADDWKETDHGPDAGSQTSGQPRISPWNDGSEKPNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A717</accession>
    <name>A0A0M7A717_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">(2R)-sulfolactate sulfo-lyase subunit beta</fullName>
            <ecNumber evidence="4">4.4.1.24</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">suyB</name>
        <name evidence="4" type="ORF">LAX5112_02109</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UxaA family.</text>
    </comment>
    <dbReference type="EC" id="4.4.1.24" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69424.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671772.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02109"/>
    <dbReference type="EnsemblBacteria" id="CTQ69424">
        <property type="protein sequence ID" value="CTQ69424"/>
        <property type="gene ID" value="LAX5112_02109"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034010">
        <property type="term" value="F:sulfolactate sulfo-lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007392">
        <property type="entry name" value="Gal/Altron_deHydtase_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04295">
        <property type="entry name" value="GD_AH_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 4" id="KW-0456">Lyase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GD_AH_C" evidence="3">
        <location>
            <begin position="9"/>
            <end position="390"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010986"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF04295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ69424.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="393" mass="42814" checksum="5BF7C558A30CABE0" modified="2015-12-09" version="1">MSTKYSNMTVKAYRRENGRVGVRNHVLILPVDDISNAACEAVANNVKGTLAIPHAYGRLQFGEDLELHFRTMIGTGANPNVAAVVVIGIEPGWTKRIADGIRETGKPVAEFSIEQNGDFETIRRASWAAKDFVHKTSEYQREECSISELWVSTKCGESDTTTGLGSCPTVGNMYDKLLPEGITGFFGETSEITGAEHICQKRAINEEVGERWYKMWKAYQDDVIFAHQTDDLSDSQPTKGNIEGGLTTIEEKALGNLEKIGRTSQYIDILDPAEAPKSGNGLYFMDSSSAAAECVTLMAAGGAVIHTFPTGQGNVVGNPIVPVVKITANPRTVRTMSEHVDVDVSGILRREMTIDEAGDALIEMICRTANGRNTAAEALGHREFSMTKLYRSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A718</accession>
    <name>A0A0M7A718_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02327</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70030.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70030">
        <property type="protein sequence ID" value="CTQ70030"/>
        <property type="gene ID" value="LAX5112_02327"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ70030.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="119" mass="13046" checksum="E929FCDDC245E337" modified="2015-12-09" version="1">MRPSRGCRGEGLNRAGSCRFFCDLNEGQLQAATQSLVRAIVEVRFAVAPGICRYHVGIDPRRTVHKNAEAGGVPRVGDAIPTLTGSEFDWLRFTHGRILDLAGMQRPKQRLANMQAIAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A725</accession>
    <name>A0A0M7A725_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">1-deoxy-D-xylulose-5-phosphate synthase</fullName>
            <ecNumber evidence="10">2.2.1.7</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10">1-deoxyxylulose-5-phosphate synthase</fullName>
            <shortName evidence="10">DXP synthase</shortName>
            <shortName evidence="10">DXPS</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="12" type="primary">dxs_1</name>
        <name evidence="10" type="synonym">dxs</name>
        <name evidence="12" type="ORF">LAX5112_02499</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>D-glyceraldehyde 3-phosphate + H(+) + pyruvate = 1-deoxy-D-xylulose 5-phosphate + CO2</text>
            <dbReference type="Rhea" id="RHEA:12605"/>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:57792"/>
            <dbReference type="ChEBI" id="CHEBI:59776"/>
            <dbReference type="EC" id="2.2.1.7"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="10">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="10">Binds 1 Mg(2+) ion per subunit.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="10">
            <name>thiamine diphosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58937"/>
        </cofactor>
        <text evidence="10">Binds 1 thiamine pyrophosphate per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="1 10">Metabolic intermediate biosynthesis; 1-deoxy-D-xylulose 5-phosphate biosynthesis; 1-deoxy-D-xylulose 5-phosphate from D-glyceraldehyde 3-phosphate and pyruvate: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3 10">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 10">Belongs to the transketolase family. DXPS subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.2.1.7" evidence="10"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70411.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672081.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02499"/>
    <dbReference type="EnsemblBacteria" id="CTQ70411">
        <property type="protein sequence ID" value="CTQ70411"/>
        <property type="gene ID" value="LAX5112_02499"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00064">
        <property type="reaction ID" value="UER00091"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008661">
        <property type="term" value="F:1-deoxy-D-xylulose-5-phosphate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030976">
        <property type="term" value="F:thiamine pyrophosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052865">
        <property type="term" value="P:1-deoxy-D-xylulose 5-phosphate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016114">
        <property type="term" value="P:terpenoid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009228">
        <property type="term" value="P:thiamine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd02007">
        <property type="entry name" value="TPP_DXS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.920">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00315">
        <property type="entry name" value="DXP_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005477">
        <property type="entry name" value="Dxylulose-5-P_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029061">
        <property type="entry name" value="THDP-binding"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009014">
        <property type="entry name" value="Transketo_C/PFOR_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005475">
        <property type="entry name" value="Transketolase-like_Pyr-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020826">
        <property type="entry name" value="Transketolase_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033248">
        <property type="entry name" value="Transketolase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005474">
        <property type="entry name" value="Transketolase_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43322">
        <property type="entry name" value="PTHR43322"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13292">
        <property type="entry name" value="DXP_synthase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02779">
        <property type="entry name" value="Transket_pyr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02780">
        <property type="entry name" value="Transketolase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00861">
        <property type="entry name" value="Transket_pyr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52518">
        <property type="entry name" value="SSF52518"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52922">
        <property type="entry name" value="SSF52922"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00204">
        <property type="entry name" value="dxs"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00801">
        <property type="entry name" value="TRANSKETOLASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00802">
        <property type="entry name" value="TRANSKETOLASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 10" id="KW-0414">Isoprene biosynthesis</keyword>
    <keyword evidence="6 10" id="KW-0460">Magnesium</keyword>
    <keyword evidence="5 10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 10" id="KW-0784">Thiamine biosynthesis</keyword>
    <keyword evidence="8 10" id="KW-0786">Thiamine pyrophosphate</keyword>
    <keyword evidence="4 10 12" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="TRANSKETOLASE_1" evidence="11">
        <location>
            <begin position="49"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="region of interest" description="Thiamine pyrophosphate binding" evidence="10">
        <location>
            <begin position="134"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="region of interest" description="Thiamine pyrophosphate binding" evidence="10">
        <location>
            <begin position="166"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="93"/>
        </location>
        <ligand>
            <name>thiamine diphosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58937"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="165"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="194"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="303"/>
        </location>
        <ligand>
            <name>thiamine diphosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58937"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="385"/>
        </location>
        <ligand>
            <name>thiamine diphosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58937"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011081"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS00801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ70411.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="653" mass="69638" checksum="8D354F17E8D94EEE" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7N5</accession>
    <name>A0A0M7A7N5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">D-galactonate dehydratase</fullName>
            <ecNumber evidence="2">4.2.1.6</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">dgoD_1</name>
        <name evidence="2" type="ORF">LAX5112_02517</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="4.2.1.6" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70462.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02517"/>
    <dbReference type="EnsemblBacteria" id="CTQ70462">
        <property type="protein sequence ID" value="CTQ70462"/>
        <property type="gene ID" value="LAX5112_02517"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008869">
        <property type="term" value="F:galactonate dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.390.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036849">
        <property type="entry name" value="Enolase-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029017">
        <property type="entry name" value="Enolase-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029065">
        <property type="entry name" value="Enolase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013342">
        <property type="entry name" value="Mandelate_racemase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034593">
        <property type="entry name" value="Mandelate_racemase_DgoD-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013341">
        <property type="entry name" value="Mandelate_racemase_N_dom"/>
    </dbReference>
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        <property type="entry name" value="PTHR48080"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13378">
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02746">
        <property type="entry name" value="MR_MLE_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00922">
        <property type="entry name" value="MR_MLE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51604">
        <property type="entry name" value="SSF51604"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54826">
        <property type="entry name" value="SSF54826"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MR_MLE" evidence="1">
        <location>
            <begin position="150"/>
            <end position="260"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00922"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70462.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="403" mass="44256" checksum="E1497BD1BE60F4D1" modified="2015-12-09" version="1">MRLSDIETFVVGNPPPRHGGRYFIFVKLVTACGITGYGEIYNATFGPDLVAKMAEDVFARQFAGEDPHHIEKLWHKTYGAGYTQRPDVTVMGVLSGLEMACWDIIGKAAGKPAYELLGGKVHERLRSYTYLYPTDGDVYPDPDKPNVYNDADMAAEAAAKAVDQGFTAVKFDPAGAYTIYDGHQPSLEDLERSEAFCKQIREAVGTKADLLFGTHGQFTVSGAKRLARRLEAYDPLWFEEPIPPEKPEDMAEVARYTSIPVATGERLCTKYEFSRVLETGAASILQMNLGRVGGLLEAKKIAAMAECHSAQIAPHLYCGPLVALANIQLATCSPNFLVLESIRTFDGFFADLLKTPIRWENGYIIPSQEPGLGHDLNEDVARAIPYTGSDLHLGFQETPALPL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8G6</accession>
    <name>A0A0M7A8G6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Mg-chelatase subunit ChlD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_02742</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71169.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672291.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02742"/>
    <dbReference type="EnsemblBacteria" id="CTQ71169">
        <property type="protein sequence ID" value="CTQ71169"/>
        <property type="gene ID" value="LAX5112_02742"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003959">
        <property type="entry name" value="ATPase_AAA_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00004">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA" evidence="3">
        <location>
            <begin position="25"/>
            <end position="183"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ71169.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="281" mass="32276" checksum="1F199EFAF9990C2A" modified="2015-12-09" version="1">MRFEGTESYIATEDLRVAVNAAVALERPLLVKGEPGTGKTVLAEQVAQALNAPLIEWHVKSTTKAQQGLYEYDAVSRLRDSQLGDERVKDINNYIRKGKLWDAFVAPEKPVLLIDEIDKADIEFPNDLLLELDRMEFHVYETGETVRAKQRPVVIITSNNEKDLPDAFLRRCFFHFIKFPDAETMTEIVEVHFPGIKQRLLNEALRMFFEVRDVPGLKKKPSTSELIDWIKLLLNEDIDPETLRQQDSGKLIPPLHGALLKNEQDVHLFERLAFMARRERG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8M6</accession>
    <name>A0A0M7A8M6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02843</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71495.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672368.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ71495">
        <property type="protein sequence ID" value="CTQ71495"/>
        <property type="gene ID" value="LAX5112_02843"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="35"/>
            <end position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71495.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="78" mass="7978" checksum="C5FFBF7E31A7201B" modified="2015-12-09" version="1">MKSILEKTTATFAGAIVVLVGCVMAGLGFTVIAFLALFALAAYGLALIAAPFLAMAQKQAESTEPQDIDMPSDAQTAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9J2</accession>
    <name>A0A0M7A9J2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 10">L-aspartate oxidase</fullName>
            <ecNumber evidence="4 10">1.4.3.16</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">nadB</name>
        <name evidence="13" type="ORF">LAX5112_02453</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Catalyzes the oxidation of L-aspartate to iminoaspartate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>L-aspartate + O2 = H2O2 + iminosuccinate</text>
            <dbReference type="Rhea" id="RHEA:25876"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:16240"/>
            <dbReference type="ChEBI" id="CHEBI:29991"/>
            <dbReference type="ChEBI" id="CHEBI:77875"/>
            <dbReference type="EC" id="1.4.3.16"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="9">
            <dbReference type="Rhea" id="RHEA:25877"/>
        </physiologicalReaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 10">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="2 10">Cofactor biosynthesis; NAD(+) biosynthesis; iminoaspartate from L-aspartate (oxidase route): step 1/1.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="10">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 10">Belongs to the FAD-dependent oxidoreductase 2 family. NadB subfamily.</text>
    </comment>
    <dbReference type="EC" id="1.4.3.16" evidence="4 10"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70294.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02453"/>
    <dbReference type="EnsemblBacteria" id="CTQ70294">
        <property type="protein sequence ID" value="CTQ70294"/>
        <property type="gene ID" value="LAX5112_02453"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00253">
        <property type="reaction ID" value="UER00326"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008734">
        <property type="term" value="F:L-aspartate oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044318">
        <property type="term" value="F:L-aspartate:fumarate oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009435">
        <property type="term" value="P:NAD biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.700.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003953">
        <property type="entry name" value="FAD-binding_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037099">
        <property type="entry name" value="Fum_R/Succ_DH_flav-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015939">
        <property type="entry name" value="Fum_Rdtase/Succ_DH_flav-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005288">
        <property type="entry name" value="NadB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027477">
        <property type="entry name" value="Succ_DH/fumarate_Rdtase_cat_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42716">
        <property type="entry name" value="PTHR42716"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00890">
        <property type="entry name" value="FAD_binding_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02910">
        <property type="entry name" value="Succ_DH_flav_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46977">
        <property type="entry name" value="SSF46977"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56425">
        <property type="entry name" value="SSF56425"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00551">
        <property type="entry name" value="nadB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0274">FAD</keyword>
    <keyword evidence="5 10" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8 10 13" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6 10" id="KW-0662">Pyridine nucleotide biosynthesis</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FAD_binding_2" evidence="11">
        <location>
            <begin position="19"/>
            <end position="389"/>
        </location>
    </feature>
    <feature type="domain" description="Succ_DH_flav_C" evidence="12">
        <location>
            <begin position="474"/>
            <end position="509"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004950"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008562"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012173"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022642"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00029281"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU362049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF00890"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF02910"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="CTQ70294.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="534" mass="56821" checksum="F47E350488262AC9" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9L6</accession>
    <name>A0A0M7A9L6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Alpha-ketoglutarate-dependent dioxygenase AlkB</fullName>
            <ecNumber evidence="7">1.14.11.33</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">alkB</name>
        <name evidence="7" type="ORF">LAX5112_02776</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Fe(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29033"/>
        </cofactor>
    </comment>
    <dbReference type="EC" id="1.14.11.33" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71307.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672328.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02776"/>
    <dbReference type="EnsemblBacteria" id="CTQ71307">
        <property type="protein sequence ID" value="CTQ71307"/>
        <property type="gene ID" value="LAX5112_02776"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035516">
        <property type="term" value="F:oxidative DNA demethylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.590">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004574">
        <property type="entry name" value="Alkb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027450">
        <property type="entry name" value="AlkB-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037151">
        <property type="entry name" value="AlkB-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005123">
        <property type="entry name" value="Oxoglu/Fe-dep_dioxygenase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR16557">
        <property type="entry name" value="PTHR16557"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13532">
        <property type="entry name" value="2OG-FeII_Oxy_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51471">
        <property type="entry name" value="FE2OG_OXY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 7" id="KW-0223">Dioxygenase</keyword>
    <keyword evidence="2" id="KW-0227">DNA damage</keyword>
    <keyword evidence="5" id="KW-0234">DNA repair</keyword>
    <keyword evidence="4 7" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Fe2OG dioxygenase" evidence="6">
        <location>
            <begin position="104"/>
            <end position="205"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001954"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022964"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ71307.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="207" mass="22607" checksum="0F162AD485CD9384" modified="2015-12-09" version="1">MQTIAINGLTGLKYLPQCFDKTAQEDLLADVREVVATAPLFQPVMPNTGKPFSVRMSNCGPLGWVSDINGYRYQPNHPETGLMWPAIPARLLELWKAVAPDAPEPEACLINFYEPTARMGLHQDRDEAMFEAPVVSVSLGDTATFRVGGTNRKDPTKSFRLSSGDVVVLGGDARLAYHGIDRILSGTSKLLKNGGRINLTLRRVTAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9N2</accession>
    <name>A0A0M7A9N2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Flagellar basal body protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">flgE_1</name>
        <name evidence="7" type="ORF">LAX5112_02743</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 4">Bacterial flagellum basal body</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 4">Belongs to the flagella basal body rod proteins family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71172.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672292.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02743"/>
    <dbReference type="EnsemblBacteria" id="CTQ71172">
        <property type="protein sequence ID" value="CTQ71172"/>
        <property type="gene ID" value="LAX5112_02743"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009425">
        <property type="term" value="C:bacterial-type flagellum basal body"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001444">
        <property type="entry name" value="Flag_bb_rod_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020013">
        <property type="entry name" value="Flagellar_FlgE/F/G"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010930">
        <property type="entry name" value="Flg_bb/hook_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037925">
        <property type="entry name" value="FlgE/F/G-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00460">
        <property type="entry name" value="Flg_bb_rod"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06429">
        <property type="entry name" value="Flg_bbr_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF117143">
        <property type="entry name" value="SSF117143"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03506">
        <property type="entry name" value="FlgEFG_subfam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0975">Bacterial flagellum</keyword>
    <keyword evidence="7" id="KW-0966">Cell projection</keyword>
    <keyword evidence="7" id="KW-0969">Cilium</keyword>
    <keyword evidence="7" id="KW-0282">Flagellum</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Flg_bb_rod" evidence="5">
        <location>
            <begin position="7"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="domain" description="Flg_bbr_C" evidence="6">
        <location>
            <begin position="402"/>
            <end position="475"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009677"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023143"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU362116"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00460"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF06429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ71172.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="477" mass="48900" checksum="263A490255252CA4" modified="2015-12-09" version="1">MGIYGAINSAVSGLSAQATALENISGNVANSQTVGFKRLDTTFSDLVSGGGSTQADQVSGTTYATSRATNTIGGDISSNDVDTYMAINGEGYFVVTQAADFVDGSTTFADDSFYTRAGDFEVNKEGYFVNQSGYYLKGFPLDPTTGNPVGDNPSVIQINSQPLAANSTTTVNYQASLPRVPATTNYDPNTADSELLNDGANGAPGPNLGATEIGDTGTLEADFLASSITGGSVTAYNSNGSEVPLNVRWAKVDNTAGAEVWSMYIDTGGETGTSYYKVGDVTFDGTGQVNTIATTGATAGLGVTTDGTSSFTLDEITVGGVTAGTAGNAADSITISFANGSLTQFADPDGIATSVNLSQNGYAAGELTNIAIDESGRVIASYSNNQTRAVYEIPLATFQAEQNLRRVDGAAFAATSDSGDADLSGGGAVISNALELSNADIADEFSKLIITQQAYSANSRIVTSADEMLDSALNMVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9P4</accession>
    <name>A0A0M7A9P4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02954</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71865.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672467.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02954"/>
    <dbReference type="EnsemblBacteria" id="CTQ71865">
        <property type="protein sequence ID" value="CTQ71865"/>
        <property type="gene ID" value="LAX5112_02954"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ71865.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="101" mass="11268" checksum="D37396968508FCFE" modified="2015-12-09" version="1">MNAIFNLMSRKETVSCTVEINNTFDQLGAHLRLDNGVVVHPGDEVLVHGAPVSIPYGESQSFQREATIRRAGPLERAWTRATGDLEMMELCEFSFTERALS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAG9</accession>
    <name>A0A0M7AAG9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 6">2,3-bisphosphoglycerate-dependent phosphoglycerate mutase</fullName>
            <shortName evidence="5">BPG-dependent PGAM</shortName>
            <shortName evidence="5">PGAM</shortName>
            <shortName evidence="5">Phosphoglyceromutase</shortName>
            <shortName evidence="5">dPGM</shortName>
            <ecNumber evidence="5 6">5.4.2.11</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 7" type="primary">gpmA</name>
        <name evidence="7" type="ORF">LAX5112_02811</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5 6">Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5 6">
            <text>(2R)-2-phosphoglycerate = (2R)-3-phosphoglycerate</text>
            <dbReference type="Rhea" id="RHEA:15901"/>
            <dbReference type="ChEBI" id="CHEBI:58272"/>
            <dbReference type="ChEBI" id="CHEBI:58289"/>
            <dbReference type="EC" id="5.4.2.11"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="5 6">Carbohydrate degradation; glycolysis; pyruvate from D-glyceraldehyde 3-phosphate: step 3/5.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the phosphoglycerate mutase family. BPG-dependent PGAM subfamily.</text>
    </comment>
    <dbReference type="EC" id="5.4.2.11" evidence="5 6"/>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71406.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672350.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02811"/>
    <dbReference type="EnsemblBacteria" id="CTQ71406">
        <property type="protein sequence ID" value="CTQ71406"/>
        <property type="gene ID" value="LAX5112_02811"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00109">
        <property type="reaction ID" value="UER00186"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046538">
        <property type="term" value="F:2,3-bisphosphoglycerate-dependent phosphoglycerate mutase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006094">
        <property type="term" value="P:gluconeogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006096">
        <property type="term" value="P:glycolytic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd07067">
        <property type="entry name" value="HP_PGM_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1240">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01039">
        <property type="entry name" value="PGAM_GpmA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013078">
        <property type="entry name" value="His_Pase_superF_clade-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029033">
        <property type="entry name" value="His_PPase_superfam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001345">
        <property type="entry name" value="PG/BPGM_mutase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005952">
        <property type="entry name" value="Phosphogly_mut1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11931">
        <property type="entry name" value="PTHR11931"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00300">
        <property type="entry name" value="His_Phos_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00855">
        <property type="entry name" value="PGAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53254">
        <property type="entry name" value="SSF53254"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01258">
        <property type="entry name" value="pgm_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00175">
        <property type="entry name" value="PG_MUTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 5" id="KW-0312">Gluconeogenesis</keyword>
    <keyword evidence="3 5" id="KW-0324">Glycolysis</keyword>
    <keyword evidence="4 5 7" id="KW-0413">Isomerase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Substrate binding" evidence="5">
        <location>
            <begin position="9"/>
            <end position="16"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="5">
        <location>
            <begin position="22"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="5">
        <location>
            <begin position="88"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="5">
        <location>
            <begin position="115"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="5">
        <location>
            <begin position="159"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="active site" description="Tele-phosphohistidine intermediate" evidence="5">
        <location>
            <position position="10"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor/acceptor" evidence="5">
        <location>
            <position position="88"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="61"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="99"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="site" description="Transition state stabilizer" evidence="5">
        <location>
            <position position="158"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006717"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023152"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01039"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU004512"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ71406.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="206" mass="23174" checksum="545A344529B8CC9E" modified="2015-12-09" version="1">MERLLVLVRHGQSEWNLKNLFTGWKDPGLTDQGVAEAHKAGEQLRDLKLNFDLAFTSVLSRAQKTLGIILEELDQTGLETFKDQALNERDYGDLTGMNKDEAREKFGEEQVHSWRRSYDIPPPGGESLKMTAERVLPYYKAEILPRVLSGKRTIVAAHGNSLRSLIMELEGLSPEEILKRELGTGTPIIYRLDEDGKVISVQDLAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAN3</accession>
    <name>A0A0M7AAN3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Succinate dehydrogenase cytochrome b556 subunit</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="primary">sdhC</name>
        <name evidence="15" type="ORF">LAX5112_02836</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Membrane-anchoring subunit of succinate dehydrogenase (SDH).</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="13">
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </cofactor>
        <text evidence="13">The heme is bound between the two transmembrane subunits.</text>
    </comment>
    <comment type="subunit">
        <text evidence="12">Part of an enzyme complex containing four subunits: a flavoprotein, an iron-sulfur protein, plus two membrane-anchoring proteins, SdhC and SdhD. The complex can form homotrimers.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the cytochrome b560 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71476.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672365.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02836"/>
    <dbReference type="EnsemblBacteria" id="CTQ71476">
        <property type="protein sequence ID" value="CTQ71476"/>
        <property type="gene ID" value="LAX5112_02836"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045281">
        <property type="term" value="C:succinate dehydrogenase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000104">
        <property type="term" value="F:succinate dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006099">
        <property type="term" value="P:tricarboxylic acid cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1300.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034804">
        <property type="entry name" value="SQR/QFR_C/D"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018495">
        <property type="entry name" value="Succ_DH_cyt_bsu_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014314">
        <property type="entry name" value="Succ_DH_cytb556"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000701">
        <property type="entry name" value="SuccDH_FuR_B_TM-su"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10978">
        <property type="entry name" value="PTHR10978"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01127">
        <property type="entry name" value="Sdh_cyt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000178">
        <property type="entry name" value="SDH_cyt_b560"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81343">
        <property type="entry name" value="SSF81343"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02970">
        <property type="entry name" value="succ_dehyd_cytB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01000">
        <property type="entry name" value="SDH_CYT_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01001">
        <property type="entry name" value="SDH_CYT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0249">Electron transport</keyword>
    <keyword evidence="5 13" id="KW-0349">Heme</keyword>
    <keyword evidence="10 13" id="KW-0408">Iron</keyword>
    <keyword evidence="11 14" id="KW-0472">Membrane</keyword>
    <keyword evidence="7 13" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 14" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 14" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="8" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="37"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="65"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="108"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="13">
        <location>
            <position position="85"/>
        </location>
        <ligand>
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
            <note>ligand shared with second transmembrane subunit</note>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004050"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00020076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00025912"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="PIRSR" id="PIRSR000178-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="CTQ71476.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="132" mass="14715" checksum="E994296145CEA0FB" modified="2015-12-09" version="1">MSNADLRGNRPLSPHLQIYKPILTMVMSILHRITGAALYFGTILLAWWLIAAAAGPAYFDFVNAIYGSIIGRLVLFGFTWALVHHMLGGIRHFIWDMGAGFEKNAREWLAKATIIGSVSLTLILWIIGYAVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABE4</accession>
    <name>A0A0M7ABE4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Oxygen sensor histidine kinase NreB</fullName>
            <ecNumber evidence="8">2.7.13.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">nreB</name>
        <name evidence="8" type="ORF">LAX5112_03095</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72199.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672692.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03095"/>
    <dbReference type="EnsemblBacteria" id="CTQ72199">
        <property type="protein sequence ID" value="CTQ72199"/>
        <property type="gene ID" value="LAX5112_03095"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046983">
        <property type="term" value="F:protein dimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033480">
        <property type="entry name" value="sCache_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011712">
        <property type="entry name" value="Sig_transdc_His_kin_sub3_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017171">
        <property type="entry name" value="Sig_transdc_His_kinase_MctS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07730">
        <property type="entry name" value="HisKA_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17200">
        <property type="entry name" value="sCache_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF037314">
        <property type="entry name" value="STHK_MctS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01049">
        <property type="entry name" value="Cache_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8" id="KW-0418">Kinase</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0808">Transferase</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="203"/>
            <end position="226"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="7">
        <location>
            <begin position="253"/>
            <end position="447"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ72199.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="453" mass="50147" checksum="BBF82D82265C0C91" modified="2015-12-09" version="1">MTFKTKLLLITILPLIAVSLLIGGVSYYQSSALIDAETRSVETRILAAKRQEIRNYVSLALTSIEQIYENEPDGRLAAQAEVKEILKNLTFDYDGYFFVYTQDGTNVVHPKLPQLVGNNWWDLQDKTGDFVIQNLIKAAQQGGGFHQYVWHKPSTGTVEEKLGYAILLDKWGWMLGTGLYTDDIAKEIAAIRADFARSIRQTLFVIFLITLAAIIIVGTLIAAVRFSEQRFADTRLKALTNRILEVQEQERKRVSTELHDSISQLLVSVRYGLELIHSEANQNADLQAQAAKCLNIIDGTIAEVRRISRDLRPSVLDDMGLAAALGSLGKEFQAQSGITVNVEAERCHARLSEGAKTSLYRVVQECMTNVARHAEAGEVNISLTVGARTLKLRVEDDGIGLPYPLPKTGGLGFRNMRERIETYGGKLSLSRGKFGGTQIDVEMPLDNATAMAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABI1</accession>
    <name>A0A0M7ABI1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03005</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72007.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672502.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72007">
        <property type="protein sequence ID" value="CTQ72007"/>
        <property type="gene ID" value="LAX5112_03005"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="187"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="187"/>
            <end position="206"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72007.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="349" mass="37401" checksum="84466AA7F02C5379" modified="2015-12-09" version="1">MSVFSIVSNSSQQQFSLRPQSNGLGLQRSVRTAETLLDQIGNTASPLTEEEQKAAQGLLEDFKGAVETSVSMSRALQDNKDALREERLARMEARIEQLKELLRFATPEQAKRLLKELKQISKDFSSAANGLKKAAGELGGGSSSSQSATANAVNSVISSTLTRPAQPPTASNQVAVGSSAVQAVTAERLSEPAVTNTDTGTPSEYTGIKDGNAPGHGPKTREDQTEALKAGVFAYAEQQAKSETAHKDSRIAGMRDEQDRLRKVGDDIEMLAKWLEALAEKDDETEDDLDEIRDELKAGRDDLNDPELVETLSPRAIEAGTTASQFQETVVTGSSIGVTTPVVQTNVVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABV8</accession>
    <name>A0A0M7ABV8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">phoR_3</name>
        <name evidence="9" type="ORF">LAX5112_02909</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71690.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672414.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02909"/>
    <dbReference type="EnsemblBacteria" id="CTQ71690">
        <property type="protein sequence ID" value="CTQ71690"/>
        <property type="gene ID" value="LAX5112_02909"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025908">
        <property type="entry name" value="Sensor_TM1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025919">
        <property type="entry name" value="Stimulus_sens_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13755">
        <property type="entry name" value="Sensor_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13756">
        <property type="entry name" value="Stimulus_sens_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0418">Kinase</keyword>
    <keyword evidence="6" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 9" id="KW-0808">Transferase</keyword>
    <keyword evidence="6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="57"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="295"/>
            <end position="315"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="8">
        <location>
            <begin position="312"/>
            <end position="368"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="7">
        <location>
            <begin position="376"/>
            <end position="605"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ71690.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="607" mass="66837" checksum="343FCF80FB8EB423" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACC9</accession>
    <name>A0A0M7ACC9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Protease production enhancer protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">degU_1</name>
        <name evidence="5" type="ORF">LAX5112_03033</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72066.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03033"/>
    <dbReference type="EnsemblBacteria" id="CTQ72066">
        <property type="protein sequence ID" value="CTQ72066"/>
        <property type="gene ID" value="LAX5112_03033"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008233">
        <property type="term" value="F:peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06170">
        <property type="entry name" value="LuxR_C_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016032">
        <property type="entry name" value="Sig_transdc_resp-reg_C-effctor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000792">
        <property type="entry name" value="Tscrpt_reg_LuxR_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00196">
        <property type="entry name" value="GerE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00038">
        <property type="entry name" value="HTHLUXR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00421">
        <property type="entry name" value="HTH_LUXR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46894">
        <property type="entry name" value="SSF46894"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00622">
        <property type="entry name" value="HTH_LUXR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50043">
        <property type="entry name" value="HTH_LUXR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="5" id="KW-0645">Protease</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="4">
        <location>
            <begin position="7"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="domain" description="HTH luxR-type" evidence="3">
        <location>
            <begin position="145"/>
            <end position="210"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="2">
        <location>
            <position position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ72066.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="226" mass="24416" checksum="AA5BD63770160586" modified="2015-12-09" version="1">MSAPSYRFVIADDHPLFRGALRQTLEAQYPQASIVEAGALEDVTSLLEKDGEVDLILLDLTMPGMRGFSGLMYLRAQHTGVPVVVVSANEDPQAIRKAMEFGSSGFIPKSHGIEVIREAIAEVMLGNVWTPPDVDLSADDGSGDLVQRLSTLTPQQVRVLMMLSEGLLNKQIAYELSVSEATVKAHVSAILQKLGVESRTQAVIAASKIEAGQWQMNGETVETPDV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACN2</accession>
    <name>A0A0M7ACN2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Cyn operon transcriptional activator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">cynR</name>
        <name evidence="3" type="ORF">LAX5112_02991</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71970.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02991"/>
    <dbReference type="EnsemblBacteria" id="CTQ71970">
        <property type="protein sequence ID" value="CTQ71970"/>
        <property type="gene ID" value="LAX5112_02991"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00039">
        <property type="entry name" value="HTHLYSR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="8"/>
            <end position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ71970.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="296" mass="31696" checksum="25041F2E745920FF" modified="2015-12-09" version="1">MPSDSQDLPLAMVRALRIIGETGSVSEAARALGISQPAVSKGIAQLEKRFGLDLLIRGARPLGLTEEGQALAAFARQADLLQDKALRHLQDVRRDKIGTVRLGSFGSSASFHILPRLLGAFGRKFPGIDVEILEFPDADLETVLRSGGVDAAILADPHKEDLDIFPLVSDELVALVQDNHPLAVRSTVRAEDLCRDPFILTKGGSAPLVEKWFAAAGQTPKVAHTILQVNSILALVNAGLGVSIIAKLALPSEPAGVKVLTLTPAPPRSIILARIDKASRSRAAQTFWQFCESTWT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACU1</accession>
    <name>A0A0M7ACU1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Holliday junction ATP-dependent DNA helicase RuvA</fullName>
            <ecNumber evidence="8">3.6.4.12</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8 11" type="primary">ruvA</name>
        <name evidence="11" type="ORF">LAX5112_03188</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>ATP + H2O = ADP + H(+) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="3.6.4.12"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="8">Forms a complex with RuvB.</text>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the RuvA family.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.12" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72457.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008196538.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03188"/>
    <dbReference type="EnsemblBacteria" id="CTQ72457">
        <property type="protein sequence ID" value="CTQ72457"/>
        <property type="gene ID" value="LAX5112_03188"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009379">
        <property type="term" value="C:Holliday junction helicase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009378">
        <property type="term" value="F:four-way junction helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009432">
        <property type="term" value="P:SOS response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd14332">
        <property type="entry name" value="UBA_RuvA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00031">
        <property type="entry name" value="DNA_helic_RuvA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013849">
        <property type="entry name" value="DNA_helicase_Holl-junc_RuvA_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000085">
        <property type="entry name" value="RuvA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010994">
        <property type="entry name" value="RuvA_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011114">
        <property type="entry name" value="RuvA_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036267">
        <property type="entry name" value="RuvA_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07499">
        <property type="entry name" value="RuvA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01330">
        <property type="entry name" value="RuvA_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46929">
        <property type="entry name" value="SSF46929"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47781">
        <property type="entry name" value="SSF47781"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00084">
        <property type="entry name" value="ruvA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8" id="KW-0227">DNA damage</keyword>
    <keyword evidence="6 8" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="8" id="KW-0234">DNA repair</keyword>
    <keyword evidence="5 8" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="3 8 11" id="KW-0347">Helicase</keyword>
    <keyword evidence="2 8 11" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 8" id="KW-0742">SOS response</keyword>
    <feature type="domain" description="RuvA_N" evidence="9">
        <location>
            <begin position="1"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="domain" description="RuvA_C" evidence="10">
        <location>
            <begin position="158"/>
            <end position="203"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023236"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00031"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF01330"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF07499"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ72457.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="205" mass="21473" checksum="5ECD8FCB57A8B9F2" modified="2015-12-09" version="1">MIGKLKGTIDSYGEDHVILDVHGVGYQVHCPSRILQALPRAGEAAVLFIETIVREDMIRLYGFAAEAEREWFRILMTVQGVGAKVALGILGILKASEVANAIALGDKATISRAPGVGKRVAERILSELKDKAPGLASIDQDTIAVSQTVADNVAARPVAEAVSALTNLGYGQPQASAAVAKAMQSAGEDATTETLIRLGLKELAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACU7</accession>
    <name>A0A0M7ACU7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Peptide chain release factor 3</fullName>
            <shortName evidence="6">RF-3</shortName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6 8" type="primary">prfC</name>
        <name evidence="8" type="ORF">LAX5112_03379</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72945.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672785.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03379"/>
    <dbReference type="EnsemblBacteria" id="CTQ72945">
        <property type="protein sequence ID" value="CTQ72945"/>
        <property type="gene ID" value="LAX5112_03379"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016149">
        <property type="term" value="F:translation release factor activity, codon specific"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006449">
        <property type="term" value="P:regulation of translational termination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd04169">
        <property type="entry name" value="RF3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.3280">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00072">
        <property type="entry name" value="Rel_fac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035647">
        <property type="entry name" value="EFG_III/V"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004161">
        <property type="entry name" value="EFTu-like_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031157">
        <property type="entry name" value="G_TR_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004548">
        <property type="entry name" value="PrfC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032090">
        <property type="entry name" value="RF3_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038467">
        <property type="entry name" value="RF3_dom_3_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041732">
        <property type="entry name" value="RF3_GTP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005225">
        <property type="entry name" value="Small_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000795">
        <property type="entry name" value="T_Tr_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009000">
        <property type="entry name" value="Transl_B-barrel_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43556">
        <property type="entry name" value="PTHR43556"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00009">
        <property type="entry name" value="GTP_EFTU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03144">
        <property type="entry name" value="GTP_EFTU_D2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16658">
        <property type="entry name" value="RF3_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00315">
        <property type="entry name" value="ELONGATNFCT"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50447">
        <property type="entry name" value="SSF50447"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54980">
        <property type="entry name" value="SSF54980"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00503">
        <property type="entry name" value="prfC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00231">
        <property type="entry name" value="small_GTP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00301">
        <property type="entry name" value="G_TR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51722">
        <property type="entry name" value="G_TR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 6" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4 6" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tr-type G" evidence="7">
        <location>
            <begin position="10"/>
            <end position="279"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="19"/>
            <end position="26"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="87"/>
            <end position="91"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009978"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ72945.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="532" mass="59411" checksum="257CF615AC793D2B" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AD73</accession>
    <name>A0A0M7AD73_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Glycine betaine transporter OpuD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">opuD_2</name>
        <name evidence="7" type="ORF">LAX5112_03082</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72170.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008193376.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03082"/>
    <dbReference type="EnsemblBacteria" id="CTQ72170">
        <property type="protein sequence ID" value="CTQ72170"/>
        <property type="gene ID" value="LAX5112_03082"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071705">
        <property type="term" value="P:nitrogen compound transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000060">
        <property type="entry name" value="BCCT_transptr"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30047">
        <property type="entry name" value="PTHR30047"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02028">
        <property type="entry name" value="BCCT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00842">
        <property type="entry name" value="bcct"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="46"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="85"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="120"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="190"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="229"/>
            <end position="254"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="274"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="307"/>
            <end position="327"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="391"/>
            <end position="418"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="438"/>
            <end position="465"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="492"/>
            <end position="511"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="517"/>
            <end position="537"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ72170.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="545" mass="58928" checksum="6BBB3A8DA86A8C41" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AE19</accession>
    <name>A0A0M7AE19_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">ABC transporter, substrate-binding protein, aliphatic sulfonates family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03343</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72871.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03343"/>
    <dbReference type="EnsemblBacteria" id="CTQ72871">
        <property type="protein sequence ID" value="CTQ72871"/>
        <property type="gene ID" value="LAX5112_03343"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009228">
        <property type="term" value="P:thiamine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027939">
        <property type="entry name" value="NMT1/THI5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015168">
        <property type="entry name" value="SsuA/THI5"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31528">
        <property type="entry name" value="PTHR31528"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09084">
        <property type="entry name" value="NMT1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809264" evidence="1">
        <location>
            <begin position="21"/>
            <end position="336"/>
        </location>
    </feature>
    <feature type="domain" description="NMT1" evidence="2">
        <location>
            <begin position="37"/>
            <end position="252"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF09084"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ72871.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="336" mass="35812" checksum="6B6275B28513EC5D" modified="2015-12-09" version="1">MRLLTGVALALALTSSTALSATDIKFTLDWKFEGPAAPFFIALDKGYFADEDLNVTIDTGAGSRESIPRVATGTYDMGFGDINALIKVLDDQPDLKVKAVMMAYETPPFAVIGRKSQGVTEDPKSLEGKTLGAPPPDAAFGQWPAFVDVTGIDTSGIKIESVGFPVREPMLAQGQVDAIFGFSFSSVINLKAQGVPEDDISLILMGENGLGLYGNVVITNTDFAEENPEAVKGFLKALTKGYLDAIADPAAAIPYVMKRNEILDEAVEIERLTMAVEGSIATPAVKENGFGGVDVDKLTKSMEYLQGSMGVSATPPAPERVFDASYLPPKEERMVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AE25</accession>
    <name>A0A0M7AE25_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">HTH-type transcriptional activator CmpR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">cmpR_3</name>
        <name evidence="3" type="ORF">LAX5112_03508</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73338.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672883.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03508"/>
    <dbReference type="EnsemblBacteria" id="CTQ73338">
        <property type="protein sequence ID" value="CTQ73338"/>
        <property type="gene ID" value="LAX5112_03508"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00039">
        <property type="entry name" value="HTHLYSR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="5"/>
            <end position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ73338.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="301" mass="34053" checksum="4B9F8C82CA01587F" modified="2015-12-09" version="1">MNASPSPYQIKAFTYVARERSFSRAAQTLNVTQSSVTQHVAKLENLMGTQLFIRRREGLELTRAGIELFSITDRLATLDQLVTEKVNDYNALTDGSIRLIANAPRPAMPIIARYGELYPKVQIDFTLYDWTTAMTLLNERQVDMAIVTEPQENPALVTHELRRSKYMVHMRADHRLAKEPVLSLVDLQTETLVLPEDGSLTQRVANRKIKKHDLTFQRILKTTTFPMVKEALLHGLGVGLLLENSLYPSDNLVAIPVHEMPEEYRDCVVIPRDKKDLRLIQSFLGVCIDGLVSAPQTSARN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEL4</accession>
    <name>A0A0M7AEL4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">D-malate degradation protein R</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">dmlR_8</name>
        <name evidence="3" type="ORF">LAX5112_03089</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72183.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672575.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72183">
        <property type="protein sequence ID" value="CTQ72183"/>
        <property type="gene ID" value="LAX5112_03089"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ72183.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="304" mass="34275" checksum="5A5610215C27C408" modified="2015-12-09" version="1">MDALTRMRCFIQVVDSKGFSAAARDMGRSKALVSKYVSELEDELGVRLLNRTTRQVSMTEVGESYYKEASEILQRIDDLQASVQSSQQEIRGRLRVSAPRSMGDKLLNAAMMEFLAQHPDVVLDLRLEDRFVDLVEEGFDIAVRVTQLEDSSLIARKIAPFRTVICASPELLAKVGVPNTPADLADRPCIIDTNYRYKQNWAFGSQGERQMVTVKGPVEVNSAEAVCEAALQGLGFIRMPLFFVSEYINEGRLKIVLAEHEEPMRGIYAVYPHRRHLTVKVRALVDFLVSWYAARSRAEVRTEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEY3</accession>
    <name>A0A0M7AEY3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 11">Lipid-A-disaccharide synthase</fullName>
            <ecNumber evidence="3 11">2.4.1.182</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11 12" type="primary">lpxB</name>
        <name evidence="12" type="ORF">LAX5112_03451</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 11">Condensation of UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10 11">
            <text>a lipid X + a UDP-2-N,3-O-bis[(3R)-3-hydroxyacyl]-alpha-D-glucosamine = a lipid A disaccharide + H(+) + UDP</text>
            <dbReference type="Rhea" id="RHEA:67828"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:58223"/>
            <dbReference type="ChEBI" id="CHEBI:137748"/>
            <dbReference type="ChEBI" id="CHEBI:176338"/>
            <dbReference type="ChEBI" id="CHEBI:176343"/>
            <dbReference type="EC" id="2.4.1.182"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="11">Bacterial outer membrane biogenesis; LPS lipid A biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 11">Belongs to the LpxB family.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.182" evidence="3 11"/>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73181.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03451"/>
    <dbReference type="EnsemblBacteria" id="CTQ73181">
        <property type="protein sequence ID" value="CTQ73181"/>
        <property type="gene ID" value="LAX5112_03451"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00973"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008915">
        <property type="term" value="F:lipid-A-disaccharide synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009245">
        <property type="term" value="P:lipid A biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00392">
        <property type="entry name" value="LpxB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003835">
        <property type="entry name" value="Glyco_trans_19"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30372">
        <property type="entry name" value="PTHR30372"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02684">
        <property type="entry name" value="LpxB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00215">
        <property type="entry name" value="lpxB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 11 12" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="6 11" id="KW-0441">Lipid A biosynthesis</keyword>
    <keyword evidence="5 11" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="9 11" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 11 12" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002056"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007868"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012687"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00020902"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022556"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00029342"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00392"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ73181.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="398" mass="43103" checksum="7613231B78C286D3" modified="2015-12-09" version="1">MTTPMASAMPTVCIVAGEESGDQLGSELIKALNEKLGPRVRYCGVGGERMTSLGLTSFFDMSDVSVMGLSAVLARLPLIIKRVYQTVDAAIAARPDVLIIIDSPDFTHNVAKRVRKRAPHIPVVGYVSPSVWAWRPGRAKKMSVYVDELLALLPFEPAVHNKLGGPRTHYVGHPLSENADLLRPSEGERAPLDADEKVLVVLPGSRGSEITRLLDVFGETVARLKADMPEVRVVLPAVAHLENRIRQGVANWQVQPEIVTGLDAKRAAFRSAHAALAASGTVSLELALAGVPMVVAYKVDWFFRRLNDLNKIFKFASVDSFVLPNIILGTKAIPEFLNDEVQPDVLASLLTSYLTDSPERAAQVAELGRLDDVMRLPDGYSQSAAAADVVIGCLSKNN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AF11</accession>
    <name>A0A0M7AF11_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Phenylacetate-coenzyme A ligase</fullName>
            <ecNumber evidence="4">6.2.1.30</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_03107</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="6.2.1.30" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72234.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672586.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03107"/>
    <dbReference type="EnsemblBacteria" id="CTQ72234">
        <property type="protein sequence ID" value="CTQ72234"/>
        <property type="gene ID" value="LAX5112_03107"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047475">
        <property type="term" value="F:phenylacetate-CoA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12780">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045851">
        <property type="entry name" value="AMP-bd_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028154">
        <property type="entry name" value="AMP-dep_Lig_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000873">
        <property type="entry name" value="AMP-dep_Synth/Lig"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042099">
        <property type="entry name" value="ANL_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00501">
        <property type="entry name" value="AMP-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14535">
        <property type="entry name" value="AMP-binding_C_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0436">Ligase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AMP-binding" evidence="2">
        <location>
            <begin position="124"/>
            <end position="277"/>
        </location>
    </feature>
    <feature type="domain" description="AMP-binding_C_2" evidence="3">
        <location>
            <begin position="326"/>
            <end position="401"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF14535"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ72234.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="412" mass="43986" checksum="FC6FB6CDD72AE8E6" modified="2015-12-09" version="1">MSNQPYEAREQQSPAQREQDLFARLPEQLHGAMQSAPGWAAQLDGIDAHSVTDRAALAKLPVLRKSEMLEKQKSAPPFGGFLSQNGVAAARVFMSPGPIWEPQAPGLDPWNGARALHAAGFKAGDTVLNAFSYHLTPGGFILDQAAIAMGCSVFPAGVGNTDMQVEAVEVLQPTGFTGTPDYLKVLLDRGAEQGRDMSSIKVALVSGGALFPALREEYASKGISVAQCYATADLGVIAYETEAREGMVVNEDYIVEIVRPGTGEPVADGEVGELVVTNFNPLYPLIRFGTGDLSMVMPGQSPCGRTNMRLAGWMGRADQRTKIKGMFVDPSQIAQILSNHPEVKKARLSVSRAGASDAMKLSVETEVMGNGLAERVADTLRDVTRLKGDVELVSPGTLPNDGKVIADERDYG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AF44</accession>
    <name>A0A0M7AF44_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Endoglucanase</fullName>
            <ecNumber evidence="5">3.2.1.4</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">egl</name>
        <name evidence="5" type="ORF">LAX5112_03650</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the glycosyl hydrolase 5 (cellulase A) family.</text>
    </comment>
    <dbReference type="EC" id="3.2.1.4" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73765.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03650"/>
    <dbReference type="EnsemblBacteria" id="CTQ73765">
        <property type="protein sequence ID" value="CTQ73765"/>
        <property type="gene ID" value="LAX5112_03650"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008810">
        <property type="term" value="F:cellulase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071704">
        <property type="term" value="P:organic substance metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001547">
        <property type="entry name" value="Glyco_hydro_5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00150">
        <property type="entry name" value="Cellulase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 2 5" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="2 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809281" evidence="3">
        <location>
            <begin position="27"/>
            <end position="352"/>
        </location>
    </feature>
    <feature type="domain" description="Cellulase" evidence="4">
        <location>
            <begin position="41"/>
            <end position="308"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU361153"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00150"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ73765.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="352" mass="38391" checksum="292B2EE3B492FEA5" modified="2015-12-09" version="1">MKALSAIAANAALSFLILISAFTATGAQERTCLRGVNIAGAEFGGYEGPYGESYIYPSDATLTWAASRQMTTIRLPFRWERLQPKLHSALDPAELARLKQTVAKAKQHDLTIILDPHNFAEYRDVKIGQGSVTVEAFADFWRKLGSEFSGDPRVLYLLMNEPESVTATTWFKAAQAAMLAIRGVGADNLVLVPGTIWTGASHWFDDQPGGSNAEIFKGIADPANNFAFDIHQYLDADFSGRNATCPRTGDALKALEAVTKWMRQYGYQAHLGEFGGTASHDCLDGLAQVAAYINDQSDVWIGWTAWAAGDWWGDYALSLQPQDSIDTLQMTVLERFMTVSDGSRAICGAASN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AF93</accession>
    <name>A0A0M7AF93_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative iron-regulated membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03667</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73815.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673008.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03667"/>
    <dbReference type="EnsemblBacteria" id="CTQ73815">
        <property type="protein sequence ID" value="CTQ73815"/>
        <property type="gene ID" value="LAX5112_03667"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005625">
        <property type="entry name" value="PepSY-ass_TM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34219">
        <property type="entry name" value="PTHR34219"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03929">
        <property type="entry name" value="PepSY_TM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="24"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="154"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="203"/>
            <end position="224"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="380"/>
            <end position="403"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="428"/>
            <end position="456"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73815.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="468" mass="51231" checksum="CA674F906643AB36" modified="2015-12-09" version="1">MSDISHDIRSASAPNAFYRAAWRWHFYAGLFVVPFLMILAVTGMMMMFIGYINGRDGEKITVPVPQNAQMISVSEQARQALKHHPNGVVVEWLKGRAANNVSVFRIKADGVQSMVAVDPYTGDVVESWERRKGWYDFADGIHSNLLLGTPGDRLLEIAAGLSIVLVVTGLYLWWPRDRTFVQSVVPNMKARGRDFWKGLHSSVGIFVSVVLLAFLITGMAWTGIWGSKIVQAWNTFPAEKWNNVPLSDSTHAAMNHGPVGEVPWALEQTPMPASGSASGVSGTPEGAPVTFDSIADVAAAIGFNARYRISYPQGDTGVWTINQDTMSSDAEDPFSDRTVHIDQYTGKILASVGFADYSLAAKAMAVGIPLHMGLVGLWNLALNTLACLSVIFLCVSGVVMWWMRRPKGAALRIIAPKTPKNMPHWRGAMILMLFLSLAFPLAGVTLLTVLALDYVLVKRIPVLRKAFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFC0</accession>
    <name>A0A0M7AFC0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative oxidoreductase</fullName>
            <ecNumber evidence="2">1.-.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03588</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the short-chain dehydrogenases/reductases (SDR) family.</text>
    </comment>
    <dbReference type="EC" id="1.-.-.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73589.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008189443.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03588"/>
    <dbReference type="EnsemblBacteria" id="CTQ73589">
        <property type="protein sequence ID" value="CTQ73589"/>
        <property type="gene ID" value="LAX5112_03588"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00106">
        <property type="entry name" value="adh_short"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU000363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73589.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="253" mass="26220" checksum="625368D50FD86138" modified="2015-12-09" version="1">MFDLKGQVALVTGASRGIGEAGARNLAKYGAKVVLAARSSGSITKIAEEICSDGGEAVAVTCDVAVYADVEKAVQTAIDTFGGIDILVNNAGIIEPISRIESSDPEAWGQVIDINVKGVYHGIRAVAPHMLAKGSGTIVNISSGAAVSALEGWSQYCSSKAAALSLTRCSDKEFGEKGVRVVGLSPGTVATKMQVDIKASGINPVSQLDPSVHIPAEWVGETICWLCTPAGDTYRGIDCSLRDEDVRKAVGLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFN6</accession>
    <name>A0A0M7AFN6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Gamma-glutamylcyclotransferase</fullName>
            <ecNumber evidence="1">4.3.2.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03710</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>glutathione = 5-oxo-L-proline + L-cysteinylglycine</text>
            <dbReference type="Rhea" id="RHEA:47724"/>
            <dbReference type="ChEBI" id="CHEBI:57925"/>
            <dbReference type="ChEBI" id="CHEBI:58402"/>
            <dbReference type="ChEBI" id="CHEBI:61694"/>
            <dbReference type="EC" id="4.3.2.7"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the gamma-glutamylcyclotransferase family.</text>
    </comment>
    <dbReference type="EC" id="4.3.2.7" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ73965.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673131.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03710"/>
    <dbReference type="EnsemblBacteria" id="CTQ73965">
        <property type="protein sequence ID" value="CTQ73965"/>
        <property type="gene ID" value="LAX5112_03710"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003839">
        <property type="term" value="F:gamma-glutamylcyclotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061928">
        <property type="term" value="F:glutathione specific gamma-glutamylcyclotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006751">
        <property type="term" value="P:glutathione catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd06661">
        <property type="entry name" value="GGCT_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006840">
        <property type="entry name" value="ChaC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013024">
        <property type="entry name" value="GGCT-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036568">
        <property type="entry name" value="GGCT-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12192">
        <property type="entry name" value="PTHR12192"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04752">
        <property type="entry name" value="ChaC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF110857">
        <property type="entry name" value="SSF110857"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU363081"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73965.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="176" mass="19617" checksum="40BDF56EAC3B4CA4" modified="2015-12-09" version="1">MSDFWVFGYGSLMWNPGFDHLHAEPALLHGAHRSLCVYSWVHRGTEARPGLVFGLDNGGTCRGMAYQVATKNWPTTLEYLRAREQTTMVYKEHWHNISLDSGQKVEALVYMVDHGHPQYAGALPLEKQLEIVNGAVGKSGPNPEYVINTAAHLDEMQITDTGLTWLAGQLKSIVKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AG73</accession>
    <name>A0A0M7AG73_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 8 9">Uroporphyrinogen decarboxylase</fullName>
            <shortName evidence="8">UPD</shortName>
            <shortName evidence="8">URO-D</shortName>
            <ecNumber evidence="4 8 9">4.1.1.37</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8 12" type="primary">hemE</name>
        <name evidence="12" type="ORF">LAX5112_03778</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8 9">
            <text>4 H(+) + uroporphyrinogen III = 4 CO2 + coproporphyrinogen III</text>
            <dbReference type="Rhea" id="RHEA:19865"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:57308"/>
            <dbReference type="ChEBI" id="CHEBI:57309"/>
            <dbReference type="EC" id="4.1.1.37"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1 8 9">Porphyrin-containing compound metabolism; protoporphyrin-IX biosynthesis; coproporphyrinogen-III from 5-aminolevulinate: step 4/4.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3 8">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 8 10">Belongs to the uroporphyrinogen decarboxylase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="4.1.1.37" evidence="4 8 9"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74155.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673096.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03778"/>
    <dbReference type="EnsemblBacteria" id="CTQ74155">
        <property type="protein sequence ID" value="CTQ74155"/>
        <property type="gene ID" value="LAX5112_03778"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00251">
        <property type="reaction ID" value="UER00321"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004853">
        <property type="term" value="F:uroporphyrinogen decarboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006782">
        <property type="term" value="P:protoporphyrinogen IX biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd00717">
        <property type="entry name" value="URO-D"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.210">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00218">
        <property type="entry name" value="URO_D"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038071">
        <property type="entry name" value="UROD/MetE-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006361">
        <property type="entry name" value="Uroporphyrinogen_deCO2ase_HemE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000257">
        <property type="entry name" value="Uroporphyrinogen_deCOase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01208">
        <property type="entry name" value="URO-D"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51726">
        <property type="entry name" value="SSF51726"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01464">
        <property type="entry name" value="hemE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00906">
        <property type="entry name" value="UROD_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 8 9" id="KW-0210">Decarboxylase</keyword>
    <keyword evidence="6 8 9" id="KW-0456">Lyase</keyword>
    <keyword evidence="7 8 9" id="KW-0627">Porphyrin biosynthesis</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Uroporphyrinogen_deCOase" evidence="11">
        <location>
            <begin position="21"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="8">
        <location>
            <begin position="26"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="76"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="151"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="206"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="321"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="site" description="Transition state stabilizer" evidence="8">
        <location>
            <position position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004804"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009935"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022793"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00218"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU000554"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU004169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS00906"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ74155.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="342" mass="37985" checksum="98E4EBA2241826AE" modified="2015-12-09" version="1">MKSKDRAVMRVLSGEKIWPPPIWMMRQAGRYLPEYREVRAKAKNFLDFCYTPDLATEVTLQPIRRYGFDASILFSDIFVVPDAIGYPVRFEEGRGPVLEPLSADLIDRLEQDRAEDHLKPVIETVSRLRAELPEETTLLGFCGACWTVACYSVAGHTTQDQVAARVGAYKDPDLMQRFIDELVTASISYLIRQLDAGADALQIFDTWAGVLDDAGFQRWCIEPTRKIVDGVKAARPDAKIIGFPKASSARMQAYIKGTGVDAVGFDWTAPDPLALEIQKQVPIQGNLDPMRLVAGGKALEDGVQHILKTFDKGPFIFNLGHGVTPDADPDNVARMVEMVKQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGG7</accession>
    <name>A0A0M7AGG7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Spectinomycin tetracycline efflux pump</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">stp_2</name>
        <name evidence="7" type="ORF">LAX5112_03329</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72843.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672747.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72843">
        <property type="protein sequence ID" value="CTQ72843"/>
        <property type="gene ID" value="LAX5112_03329"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004638">
        <property type="entry name" value="EmrB-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00711">
        <property type="entry name" value="efflux_EmrB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="49"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="79"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="109"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="136"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="167"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="199"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="230"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="269"/>
            <end position="288"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="300"/>
            <end position="322"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="334"/>
            <end position="353"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="359"/>
            <end position="378"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="399"/>
            <end position="419"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="425"/>
            <end position="445"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="6">
        <location>
            <begin position="13"/>
            <end position="449"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ72843.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="453" mass="47405" checksum="AE2EAEC79D5A7ADB" modified="2015-12-09" version="1">MTGLSEHNRRRGLVFAMGGLGGLVMLDETVLGVSLPAIQTDLGLSATTAHWILNAYMLAFTCFAAIGGKAIDLFGLRPALIASCSLFAAACLIAGFADNAALLITMRVVQGLCAAIMFPITFAAATLTFESDERGRALGVLGATATLFLAAGPLIGGVLTDLLSWRWVFWINIPVVGTAGVLACMLWRAPDAKSARPDIDRIGLILLLVGLTALIFGLMEGPDAGWGTRLIYLSLAGGIVGLSAFVIWEVRQASPLIDVRLFQSPAFTAGVLVFLLTQMSKIVVAVLVPQYLQLDLSYSALWAGAATVIAVLPIPFLSAPAGTIADKSGSRRPVLGGLIVLIAANLCIGAAMLLDNYLYLAPFLLIWGIALPFAMIPAGRITANAVPAEKQGEVSGLLITFRLIGATLGVTLGSVFLAIGAGFPAVFWTVGVIFVGCTAFCWLAIRPEQQATS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGH9</accession>
    <name>A0A0M7AGH9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 15">Undecaprenyl-diphosphatase</fullName>
            <ecNumber evidence="4 15">3.6.1.27</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="14 15">Bacitracin resistance protein</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="13 15">Undecaprenyl pyrophosphate phosphatase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="15 16" type="primary">uppP</name>
        <name evidence="16" type="ORF">LAX5112_03629</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="17" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="15">Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 15">
            <text>di-trans,octa-cis-undecaprenyl diphosphate + H2O = di-trans,octa-cis-undecaprenyl phosphate + H(+) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:28094"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58405"/>
            <dbReference type="ChEBI" id="CHEBI:60392"/>
            <dbReference type="EC" id="3.6.1.27"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="15">Cell membrane</location>
            <topology evidence="15">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="miscellaneous">
        <text evidence="15">Bacitracin is thought to be involved in the inhibition of peptidoglycan synthesis by sequestering undecaprenyl diphosphate, thereby reducing the pool of lipid carrier available.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 15">Belongs to the UppP family.</text>
    </comment>
    <dbReference type="EC" id="3.6.1.27" evidence="4 15"/>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73701.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451386.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03629"/>
    <dbReference type="EnsemblBacteria" id="CTQ73701">
        <property type="protein sequence ID" value="CTQ73701"/>
        <property type="gene ID" value="LAX5112_03629"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050380">
        <property type="term" value="F:undecaprenyl-diphosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016311">
        <property type="term" value="P:dephosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008360">
        <property type="term" value="P:regulation of cell shape"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="term" value="P:response to antibiotic"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01006">
        <property type="entry name" value="Undec_diphosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="UppP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30622">
        <property type="entry name" value="PTHR30622"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02673">
        <property type="entry name" value="BacA"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="undec_PP_bacA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="12 15" id="KW-0046">Antibiotic resistance</keyword>
    <keyword evidence="7" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="6 15" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="15" id="KW-0133">Cell shape</keyword>
    <keyword evidence="15" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="9 15 16" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="11 15" id="KW-0472">Membrane</keyword>
    <keyword evidence="15" id="KW-0573">Peptidoglycan synthesis</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 15" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="10 15" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="48"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="82"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="109"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="217"/>
            <end position="238"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="250"/>
            <end position="267"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
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        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
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        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
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        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
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        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022519"/>
        </source>
    </evidence>
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        <source>
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        </source>
    </evidence>
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        <source>
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        </source>
    </evidence>
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        <source>
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        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
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        <source>
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        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00032707"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00032932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01006"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="CTQ73701.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="268" mass="28884" checksum="73E7E2A434DBE52C" modified="2015-12-09" version="1">MDGQTIVNALILGVVEGLTEFIPVSSTGHLLLIGHFLGFESTGKTFEVLIQLGAILAILSVYSARLWQLATSLPSDATSRRFVFGILIAFLPAAVIGVMAHGFIKEVLFETPALVCTTLLVGGIILLWIDRLELSPKYTNVMDYPLSLCLKIGFCQCLAMVPGVSRSGATIAGSLLMGTDKRSAAEFSFFLAMPTMAGAFAYDLYKNRNVISTDDVVLISIGFVASFIAGFFVVKGLLDFVSRHGFAPFAWWRIFVGLAGFAGLYFLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGL3</accession>
    <name>A0A0M7AGL3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">ABC-type transporter ATP-binding protein EcsA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">ecsA</name>
        <name evidence="6" type="ORF">LAX5112_03516</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73360.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672889.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03516"/>
    <dbReference type="EnsemblBacteria" id="CTQ73360">
        <property type="protein sequence ID" value="CTQ73360"/>
        <property type="gene ID" value="LAX5112_03516"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="ABC_TRANSPORTER_1"/>
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    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="6"/>
            <end position="238"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="40"/>
            <end position="47"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ73360.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="265" mass="28222" checksum="2520E5842D5B0EAA" modified="2015-12-09" version="1">MPSTSAAALEVLNLHKRFNEPAVDDLSLTVRSGEFYALLGPNGAGKTTTLRMVAGLLQADAGAVKICGIDAFADPIAAKKVLAWVPDDPMVYDKLTPLEYLEFVAGLWDMPPDFARFKADSLLDSLGLGAHASERCGGFSKGMRQKVALAGALIHEPRLIILDEPLTGLDASSARQVKRVLSGLVAHGVSIIMTTHILEVAERMADRIGIIARGRLVAEGTLEELRERANADGNTLEDIFLEIVGGEAGSEPPAQEATGFHEKVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AH24</accession>
    <name>A0A0M7AH24_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Bicarbonate transporter BicA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">bicA</name>
        <name evidence="3" type="ORF">LAX5112_03418</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ73053.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03418"/>
    <dbReference type="EnsemblBacteria" id="CTQ73053">
        <property type="protein sequence ID" value="CTQ73053"/>
        <property type="gene ID" value="LAX5112_03418"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015116">
        <property type="term" value="F:sulfate transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011547">
        <property type="entry name" value="SLC26A/SulP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002645">
        <property type="entry name" value="STAS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036513">
        <property type="entry name" value="STAS_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01740">
        <property type="entry name" value="STAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00916">
        <property type="entry name" value="Sulfate_transp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52091">
        <property type="entry name" value="SSF52091"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50801">
        <property type="entry name" value="STAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="25"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="51"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="96"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="126"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="164"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="188"/>
            <end position="207"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="239"/>
            <end position="263"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="313"/>
            <end position="333"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="339"/>
            <end position="358"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="370"/>
            <end position="401"/>
        </location>
    </feature>
    <feature type="domain" description="STAS" evidence="2">
        <location>
            <begin position="416"/>
            <end position="527"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ73053.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="527" mass="55469" checksum="433CB9CB8938110E" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AH66</accession>
    <name>A0A0M7AH66_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative Fe-S protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03866</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74448.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673174.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03866"/>
    <dbReference type="EnsemblBacteria" id="CTQ74448">
        <property type="protein sequence ID" value="CTQ74448"/>
        <property type="gene ID" value="LAX5112_03866"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030151">
        <property type="term" value="F:molybdenum ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005302">
        <property type="entry name" value="MoCF_Sase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005303">
        <property type="entry name" value="MOSC_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011037">
        <property type="entry name" value="Pyrv_Knase-like_insert_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03473">
        <property type="entry name" value="MOSC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03476">
        <property type="entry name" value="MOSC_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50800">
        <property type="entry name" value="SSF50800"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51340">
        <property type="entry name" value="MOSC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MOSC" evidence="1">
        <location>
            <begin position="81"/>
            <end position="228"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51340"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74448.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="244" mass="26992" checksum="73A9F59CD3C28C4E" modified="2015-12-09" version="1">MNIQSIWRFPVKSLLGEPLNAAFIDDRGLIGDRAYALADASGKLGSGKSTSHFQRIDNLLFLRAETQANEVHIGLPGEKLEPISSRDLPHRLSDFLGQPVTIVEDQDATHFDDGAVHIIMSSEVKALQARSPHLDFDPRRFRANLLLNTPDHMSAEDLLGRVLTIGDVRLKITHPTERCVMVTAKQDGLSSEPLILKAISQGFDVNFGLYASVLKPGRIEVGQEVEVSAEAGWRQNMKPRDFGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="31" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AH76</accession>
    <name>A0A0M7AH76_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="9 11">Acyl carrier protein</fullName>
            <shortName evidence="9">ACP</shortName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9 13" type="primary">acpP</name>
        <name evidence="13" type="ORF">LAX5112_03869</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 9 11">Carrier of the growing fatty acid chain in fatty acid biosynthesis.</text>
    </comment>
    <comment type="pathway">
        <text evidence="8">Glycolipid biosynthesis; KDO(2)-lipid A biosynthesis.</text>
    </comment>
    <comment type="pathway">
        <text evidence="9 11">Lipid metabolism; fatty acid biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="PTM">
        <text evidence="9">4'-phosphopantetheine is transferred from CoA to a specific serine of apo-ACP by AcpS. This modification is essential for activity because fatty acids are bound in thioester linkage to the sulfhydryl of the prosthetic group.</text>
    </comment>
    <comment type="PTM">
        <text evidence="11">4'-phosphopantetheine is transferred from CoA to a specific serine of apo-ACP by acpS.</text>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the acyl carrier protein (ACP) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74458.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008194310.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03869"/>
    <dbReference type="EnsemblBacteria" id="CTQ74458">
        <property type="protein sequence ID" value="CTQ74458"/>
        <property type="gene ID" value="LAX5112_03869"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00094"/>
    <dbReference type="UniPathway" id="UPA00360"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000036">
        <property type="term" value="F:acyl carrier activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031177">
        <property type="term" value="F:phosphopantetheine binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0036104">
        <property type="term" value="P:Kdo2-lipid A biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1200.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01217">
        <property type="entry name" value="Acyl_carrier"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036736">
        <property type="entry name" value="ACP-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003231">
        <property type="entry name" value="Acyl_carrier"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020806">
        <property type="entry name" value="PKS_PP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009081">
        <property type="entry name" value="PP-bd_ACP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006162">
        <property type="entry name" value="Ppantetheine_attach_site"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20863">
        <property type="entry name" value="PTHR20863"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00550">
        <property type="entry name" value="PP-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00823">
        <property type="entry name" value="PKS_PP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47336">
        <property type="entry name" value="SSF47336"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00517">
        <property type="entry name" value="acyl_carrier"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50075">
        <property type="entry name" value="CARRIER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00012">
        <property type="entry name" value="PHOSPHOPANTETHEINE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7 9" id="KW-0275">Fatty acid biosynthesis</keyword>
    <keyword evidence="5 9" id="KW-0276">Fatty acid metabolism</keyword>
    <keyword evidence="3 9" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="6 9" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="2 9 10" id="KW-0596">Phosphopantetheine</keyword>
    <keyword evidence="4 9" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Carrier" evidence="12">
        <location>
            <begin position="2"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="modified residue" description="O-(pantetheine 4'-phosphoryl)serine" evidence="9 10">
        <location>
            <position position="37"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022450"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022832"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023160"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00024328"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01217"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00258"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU003545"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50075"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="CTQ74458.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="77" mass="8267" checksum="C8E61F96F0A1BD90" modified="2015-12-09" version="1">MSDIADRVKKIVVEHLGVDAEKVVEGASFIDDLGADSLDTVELVMAFEEEFGVEIPDTAAETILTVGDAVKFLEANK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AI19</accession>
    <name>A0A0M7AI19_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">YHYH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03892</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74529.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03892"/>
    <dbReference type="EnsemblBacteria" id="CTQ74529">
        <property type="protein sequence ID" value="CTQ74529"/>
        <property type="gene ID" value="LAX5112_03892"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005247">
        <property type="entry name" value="YbhB_YbcL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025924">
        <property type="entry name" value="YHYH_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30289">
        <property type="entry name" value="PTHR30289"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14240">
        <property type="entry name" value="YHYH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="YHYH" evidence="2">
        <location>
            <begin position="52"/>
            <end position="243"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="299"/>
            <end position="337"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF14240"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ74529.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="337" mass="36386" checksum="72AC97E271330FA3" modified="2015-12-09" version="1">MELLVPEAEASADITVDGNSRRIRANGYPIKKPGAFPNRNNPHSISKKNYNLKIPLNPRKTGRATNAQGSVFGIAINGVVMDPGTAEYWQNNRRSGWNYEALGGACKLGLDTYNAHVQPDGTYHYHGIPTGVLASEGGRAVPALIGWAADGFPIYGPYGYSKPEQTSSVKKLKSSYRIKSGTRPSGPGGRYNGKFTQDWAYVAGAGDLDQCNGRVAVTPEYPNGTYHYVLTDSFPYIPRCWMGAPDSSFKRLKRRADVQSDEAESQFAALAADIATNRPTIGFTAMSDNSEEALTLIQAQGGHRPRFLQGGHRPPPPGAGPRQGQRRQGGRSPCSGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJ10</accession>
    <name>A0A0M7AJ10_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03926</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74627.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008194317.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74627">
        <property type="protein sequence ID" value="CTQ74627"/>
        <property type="gene ID" value="LAX5112_03926"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.280.50">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007420">
        <property type="entry name" value="DUF465"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038444">
        <property type="entry name" value="DUF465_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04325">
        <property type="entry name" value="DUF465"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ74627.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="60" mass="7239" checksum="D6AAD4A07EB242D5" modified="2015-12-09" version="1">MYARLKSLQSQHGTLDNLIQREEQHPYPDVEHIRSLKKFKLRLRDEIQRVERTLRPAQTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJ98</accession>
    <name>A0A0M7AJ98_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Gamma-glutamyl phosphate reductase</fullName>
            <shortName evidence="7">GPR</shortName>
            <ecNumber evidence="7">1.2.1.41</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Glutamate-5-semialdehyde dehydrogenase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">Glutamyl-gamma-semialdehyde dehydrogenase</fullName>
            <shortName evidence="7">GSA dehydrogenase</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7 9" type="primary">proA</name>
        <name evidence="9" type="ORF">LAX5112_03616</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>L-glutamate 5-semialdehyde + NADP(+) + phosphate = H(+) + L-glutamyl 5-phosphate + NADPH</text>
            <dbReference type="Rhea" id="RHEA:19541"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58066"/>
            <dbReference type="ChEBI" id="CHEBI:58274"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="EC" id="1.2.1.41"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 7">Amino-acid biosynthesis; L-proline biosynthesis; L-glutamate 5-semialdehyde from L-glutamate: step 2/2.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the gamma-glutamyl phosphate reductase family.</text>
    </comment>
    <dbReference type="EC" id="1.2.1.41" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73664.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672968.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03616"/>
    <dbReference type="EnsemblBacteria" id="CTQ73664">
        <property type="protein sequence ID" value="CTQ73664"/>
        <property type="gene ID" value="LAX5112_03616"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00098">
        <property type="reaction ID" value="UER00360"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004350">
        <property type="term" value="F:glutamate-5-semialdehyde dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050661">
        <property type="term" value="F:NADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055129">
        <property type="term" value="P:L-proline biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd07079">
        <property type="entry name" value="ALDH_F18-19_ProA-GPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.309.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.605.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00412">
        <property type="entry name" value="ProA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016161">
        <property type="entry name" value="Ald_DH/histidinol_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016163">
        <property type="entry name" value="Ald_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016162">
        <property type="entry name" value="Ald_DH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015590">
        <property type="entry name" value="Aldehyde_DH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020593">
        <property type="entry name" value="G-glutamylP_reductase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012134">
        <property type="entry name" value="Glu-5-SA_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000965">
        <property type="entry name" value="GPR_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00171">
        <property type="entry name" value="Aldedh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000151">
        <property type="entry name" value="GPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53720">
        <property type="entry name" value="SSF53720"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00407">
        <property type="entry name" value="proA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01223">
        <property type="entry name" value="PROA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 7" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 7" id="KW-0521">NADP</keyword>
    <keyword evidence="6 7 9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4 7" id="KW-0641">Proline biosynthesis</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aldedh" evidence="8">
        <location>
            <begin position="11"/>
            <end position="290"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000979"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004985"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022650"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00412"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ73664.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="426" mass="44870" checksum="561668F897B7812F" modified="2015-12-09" version="1">MLDKVEALSTEALMAKIGTRARAAGRVLANAPTKAKNTALIAMAKAVRAATSEILEGNAKDVEAMKANGQTAAFLDRGTLTEERVEAIAKALEDIVALDDPVGSVIAAWERPNGLKIERVRTPLGVIGVIYESRPNVTADAGALCLKAGNAVVLRGGSDTVNSNKAIHAAMQNGLSEAGLPEDAIQIVPVTDRAAVGEMLRGLNGNLDVIVPRGGRSLVERVQTEARVPVFAHLEGLVHIFVDKAADLEKAVSIVTNSKLRRTGICGALETLLVHKDVAESHLPAILHALNADDCEIRGDAEVQSIGAGVLEASEEDWSTEYLDKILSAMIVPDLDAAIAHIAKYGSNHTDCIITEDQAAADRFQAEVDSAIVLHNASTQFADGGEFGMGAEIGIATGRMHARGPVGVEQLTSFKYKVHGTGQIRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AK11</accession>
    <name>A0A0M7AK11_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04026</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74891.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74891">
        <property type="protein sequence ID" value="CTQ74891"/>
        <property type="gene ID" value="LAX5112_04026"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ74891.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="119" mass="13307" checksum="655CF916BE06A3AC" modified="2015-12-09" version="1">MGNRIGAGFFGDLDQALGNQRTGNRGAEQVDAFINGIGPEHRKDEVTNEFFAQVINIDFLDAHHLGFFARRLQLFSLTEICREGHYFAAEFGLQPFQNDGRVEAAGVGQHDFLDVTIRH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKD8</accession>
    <name>A0A0M7AKD8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Acetyltransferase (GNAT) family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04196</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75349.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673434.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04196"/>
    <dbReference type="EnsemblBacteria" id="CTQ75349">
        <property type="protein sequence ID" value="CTQ75349"/>
        <property type="gene ID" value="LAX5112_04196"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="46"/>
            <end position="197"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75349.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="204" mass="22633" checksum="02A742C5684E9C9F" modified="2015-12-09" version="1">MPNPILNLDGYTEVPDTKIAVVVTYLEMTERPSEALAPQRSDVSLKAWSSPTASEYKALFREVGEEWIWFGRLIKPDAELEALLSEPARENFLPLRAGKAVGTLELNYADPENVELAYFGLVPSAIGGGVGRWLMAQAVEMAWSRPETKRLWLHTCTADSPQALKFYQSCSFKPYKRAIEVADDPRGLGLYASETAPHVPCLMG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AL83</accession>
    <name>A0A0M7AL83_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03897</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74543.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673202.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03897"/>
    <dbReference type="EnsemblBacteria" id="CTQ74543">
        <property type="protein sequence ID" value="CTQ74543"/>
        <property type="gene ID" value="LAX5112_03897"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009325">
        <property type="entry name" value="DUF983"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06170">
        <property type="entry name" value="DUF983"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="57"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="83"/>
            <end position="102"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74543.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="141" mass="15491" checksum="B41BB8E4F18FAAC1" modified="2015-12-09" version="1">MSTQHQWPKLPPLQTGIRGRCPRCGEGKIFDGFLTMAKGCKVCGLDYSFADPADGPAFFVICFGCIPAVAFGIWLEIAFTAPYWVHLITTLPLILLTCIPMLRPLKGWLIASQYFYKAQEGRLVTADDAEPDTNSTSNATS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMC6</accession>
    <name>A0A0M7AMC6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">DnaK suppressor protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">dksA_2</name>
        <name evidence="6" type="ORF">LAX5112_04043</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ74933.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673332.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04043"/>
    <dbReference type="EnsemblBacteria" id="CTQ74933">
        <property type="protein sequence ID" value="CTQ74933"/>
        <property type="gene ID" value="LAX5112_04043"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000962">
        <property type="entry name" value="Znf_DskA_TraR"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01258">
        <property type="entry name" value="zf-dskA_traR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51128">
        <property type="entry name" value="ZF_DKSA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <keyword evidence="2" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="DksA C4-type" evidence="5">
        <location>
            <begin position="39"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="dksA C4-type" evidence="4">
        <location>
            <begin position="82"/>
            <end position="106"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00510"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ74933.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="108" mass="11932" checksum="99EBABFE09765B60" modified="2015-12-09" version="1">MNDTAVRETLVRLKAELESFSEISEDARAPVMLDQQAVGRLSRMGALQGQAMAQASERQRRADIQRIEAALKRLDEGEYGYCAQCGEDIAAKRLKVDPAAAFCIRCAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMW8</accession>
    <name>A0A0M7AMW8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Gcv operon activator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">gcvA_12</name>
        <name evidence="3" type="ORF">LAX5112_04532</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000025">
        <property type="protein sequence ID" value="CTQ76239.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673723.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000025.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04532"/>
    <dbReference type="EnsemblBacteria" id="CTQ76239">
        <property type="protein sequence ID" value="CTQ76239"/>
        <property type="gene ID" value="LAX5112_04532"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="5"/>
            <end position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ76239.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="292" mass="31969" checksum="1C03185F6090464C" modified="2015-12-09" version="1">MKRLPPLNALPALEATARLGSMSAAADELGRTHGAISKQLAHLAEQAGVALFRKDGQGVALTPEGETFAKAVGGSLQEIEAAWRGLTQLADSPTLDIGISATFAMRWLMPRLPRFYQRYPDAQVNFRMTGKHWLPEEQMDAILTWDRLRWQFGGRTDIEILGDVAFGIVHAPGLCVELKERVLTVKNRCIQELPGDVWNAYQTLAGVEVVSETTTAYPHTFLVIEAALAGLGAALVEKRIVAEELADGRLVAPFGFTLIEDGFGAIVSQRKRPKRLARAFLGWLREEAAAAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AN75</accession>
    <name>A0A0M7AN75_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Alpha/beta hydrolase family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04104</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ75064.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673382.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04104"/>
    <dbReference type="EnsemblBacteria" id="CTQ75064">
        <property type="protein sequence ID" value="CTQ75064"/>
        <property type="gene ID" value="LAX5112_04104"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013094">
        <property type="entry name" value="AB_hydrolase_3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07859">
        <property type="entry name" value="Abhydrolase_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Abhydrolase_3" evidence="1">
        <location>
            <begin position="70"/>
            <end position="192"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07859"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75064.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="268" mass="30024" checksum="1BD2F69BF61C5E98" modified="2015-12-09" version="1">MTTSPDFDWNDAYENGAYIENAQSYPGRWADEALDFRSGWIKKDIDIIYGDTDRQRLDLFHSEDKSKGLLIFVHGGYWRRFDKSYWSHLARGALRSGWSVCLPSYELAPNVRIPQITAQIGRALNKAARRVEGPIRLSGHSAGGHLVSRMICEDTPLNPEVLERIEKVVSISGLHDLRPLMKTSMNDDFLLTDADAVKESAALQAPAKDCPVTAWVGGDERPEFIRQSQLLAEAWDSAKVFVDEGKHHFDVIEGLIDPASPLTSELLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANF2</accession>
    <name>A0A0M7ANF2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Homocysteine S-methyltransferase</fullName>
            <ecNumber evidence="6">2.1.1.10</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">mmuM</name>
        <name evidence="6" type="ORF">LAX5112_04507</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="3">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="3">Binds 1 zinc ion per subunit.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.10" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000025">
        <property type="protein sequence ID" value="CTQ76187.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673707.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000025.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04507"/>
    <dbReference type="EnsemblBacteria" id="CTQ76187">
        <property type="protein sequence ID" value="CTQ76187"/>
        <property type="gene ID" value="LAX5112_04507"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047150">
        <property type="term" value="F:betaine-homocysteine S-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009086">
        <property type="term" value="P:methionine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017226">
        <property type="entry name" value="Betaine-hCys_S-MeTrfase_BHMT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003726">
        <property type="entry name" value="HCY_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036589">
        <property type="entry name" value="HCY_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02574">
        <property type="entry name" value="S-methyl_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF037505">
        <property type="entry name" value="Betaine_HMT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82282">
        <property type="entry name" value="SSF82282"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50970">
        <property type="entry name" value="HCY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="1 4 6" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4 6" id="KW-0808">Transferase</keyword>
    <keyword evidence="3 4" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Hcy-binding" evidence="5">
        <location>
            <begin position="1"/>
            <end position="290"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3 4">
        <location>
            <position position="202"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3 4">
        <location>
            <position position="275"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3 4">
        <location>
            <position position="276"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR037505-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00333"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ76187.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="294" mass="31420" checksum="E1BB8A501ECEAA9E" modified="2015-12-09" version="1">MSNITILDGGMGQELVHRSGRVPSGLWSCELMMERPDLVRAIHDDFFAAGAHVATVNSYTLHRDRLRPNGLDDQFERLHHLACDLACQSRDAHGSGLVAGCLGPLGWSYSHDGAPSEDQSIDLYDEICRVQKDHVDLFVIETIASVAQARASLTAALRHDKPVWIALTVDDGDGGALRSGEPLQEVVEVVKDLGPEAVLINCSVPEAVTRGMAVLGPSGLKTGAYANGFTAIKPEFLKKGSSVSKLAARTDMTPEVYAGHGADWIDLGATIVGGCCEVSPSHIAELSRRFNPAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANR2</accession>
    <name>A0A0M7ANR2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">L-cystine-binding protein TcyA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">tcyA_3</name>
        <name evidence="4" type="ORF">LAX5112_04387</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75860.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673604.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000023.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04387"/>
    <dbReference type="EnsemblBacteria" id="CTQ75860">
        <property type="protein sequence ID" value="CTQ75860"/>
        <property type="gene ID" value="LAX5112_04387"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00062">
        <property type="entry name" value="PBPb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809491" evidence="2">
        <location>
            <begin position="38"/>
            <end position="258"/>
        </location>
    </feature>
    <feature type="domain" description="PBPb" evidence="3">
        <location>
            <begin position="40"/>
            <end position="258"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00062"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ75860.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="258" mass="28700" checksum="F11E07F3FBF23779" modified="2015-12-09" version="1">MALELSSMTALHLVRRAVAAVAVVSGLAFAVSGPALATPRIDIVTEDYPPYEMAAEQDGLRGFDYEVATEAFRRMGYEANILFLPWKRALNEAETGRAVGILTCAHHPDRERFILFSDPISVFTNGFFVRQAHEGPDIQRVEDVVGQPVASMAGYESLAVLQNLGATPIEAQTTELGLKMLAAGRFDYLMGALEPTEYIIRREGMSDEFEFITLTTRDFHFCFSKKYPGVEELISPFNEALAEMRADGTYDAIHDKYR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANS5</accession>
    <name>A0A0M7ANS5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Teichuronic acid biosynthesis protein TuaB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">tuaB</name>
        <name evidence="2" type="ORF">LAX5112_04702</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000028">
        <property type="protein sequence ID" value="CTQ76765.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04702"/>
    <dbReference type="EnsemblBacteria" id="CTQ76765">
        <property type="protein sequence ID" value="CTQ76765"/>
        <property type="gene ID" value="LAX5112_04702"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="87"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="114"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="147"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="170"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="292"/>
            <end position="315"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="321"/>
            <end position="341"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="408"/>
            <end position="429"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76765.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="451" mass="48896" checksum="B42DA450E9930D72" modified="2015-12-09" version="1">MAITQKKAMTGAIWTIASFGGTTGIRFVSNVVLSRLITPEIFGIAMVLSTFRSGIELLTDVGIAQNVVRSRNADDQSFQNSAWTLQFVRSLLLCSILSIAAYPLANLYEIPATAIQLSAVTIIFLGLSSTSIFYLQRNLQFGRANMFELSCDFVTAVLIIFFAYMSPTIWSILISGLFAAVFRVGLSYLLPRARNWFEWNRVHVREIFSFGKWMFLSSLLSFLCMNFDKLYLAKTIPLATVGIYAIARTIADLPAFLAGRLGYSLIFPMVSSQHAATRFEIRSGLLALRTKLLTLAALGVACGIAFSDVAVWIIYDPRYSDAGWILAMLLIGTWGAILSAFSEFTLLGLSKPGYGVVANALKLAGILLLLPIGYQWMGLPGALIGLAVGEIVRYLPLAIGSVREKTSFLLHDLAMTAIVVAATAGLMWGRSAAGYGTSLDAVLPLLSAGGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AP85</accession>
    <name>A0A0M7AP85_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04750</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000030">
        <property type="protein sequence ID" value="CTQ76938.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673916.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000030.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04750"/>
    <dbReference type="EnsemblBacteria" id="CTQ76938">
        <property type="protein sequence ID" value="CTQ76938"/>
        <property type="gene ID" value="LAX5112_04750"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009394">
        <property type="entry name" value="MmcB-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06319">
        <property type="entry name" value="MmcB-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF031796">
        <property type="entry name" value="UPC031796"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ76938.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="169" mass="19084" checksum="717D32FB609EEAB7" modified="2015-12-09" version="1">MKTDIRSEGSRIELDDPLADGRQSETALKVWRGAARLMRQRKFACAAEVTLASARRADLLALGPKHELWIIEVKSSVADFRTDHKWPDYRQHCDRFFFATHPDVPLDIFPEEAGLIVSDGYGAEILRDAPEHKVAAATRKAVTLRFAQHTAHRLHALVDPEVRHLNDGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQ48</accession>
    <name>A0A0M7AQ48_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Phage tail tape measure protein, TP901 family, core region</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_04407</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75913.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673618.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000023.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04407"/>
    <dbReference type="EnsemblBacteria" id="CTQ75913">
        <property type="protein sequence ID" value="CTQ75913"/>
        <property type="gene ID" value="LAX5112_04407"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010090">
        <property type="entry name" value="Phage_tape_meas"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10145">
        <property type="entry name" value="PhageMin_Tail"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01760">
        <property type="entry name" value="tape_meas_TP901"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PhageMin_Tail" evidence="2">
        <location>
            <begin position="102"/>
            <end position="306"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="568"/>
            <end position="593"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF10145"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ75913.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="791" mass="82598" checksum="58864C66C80543F0" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQW7</accession>
    <name>A0A0M7AQW7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Hydrogenase maturation factor</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">hypD</name>
        <name evidence="4" type="ORF">LAX5112_04510</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the HypD family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000025">
        <property type="protein sequence ID" value="CTQ76193.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673709.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000025.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04510"/>
    <dbReference type="EnsemblBacteria" id="CTQ76193">
        <property type="protein sequence ID" value="CTQ76193"/>
        <property type="gene ID" value="LAX5112_04510"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.11740">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.20.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002780">
        <property type="entry name" value="Hyd_form_HypD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042243">
        <property type="entry name" value="HypD_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042244">
        <property type="entry name" value="HypD_2_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30149">
        <property type="entry name" value="PTHR30149"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01924">
        <property type="entry name" value="HypD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005622">
        <property type="entry name" value="Hydrgn_mat_hypD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00075">
        <property type="entry name" value="hypD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007888"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRNR" id="PIRNR005622"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ76193.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="384" mass="42628" checksum="E2EF912FF985CAD2" modified="2015-12-09" version="1">MKYVSEFRDKDLAKSVSAAIRREADPDRTYNFMEFCGGHTHAIFRYGVQDLMPDNVAYVHGPGCPVCVLPVRRLDDAVEIAERHNVILCTYGDMMRVPGTKQRSLIRAKSDGADIRMVYSTLDALKIARDNPDREVVFFAIGFETTTPPTAVAIKQAEKEDLSNFSVFCNHVLTPPAIAHILQSPDVQDLGTVEIDGFLGPSHVSSVIGSKPYEPAAEIFRKPVVIAGFEPLDVMQSTLMLIRQINEGRFEVENEYTRVVTREGNLKAQVLVAEVFDVRDAFEWRGLGTVAESALKIREAFAAFDAERRFEITPKQSREVKSCECPAILRGVKKPTDCKLFGTVCTPDTPMGSCMVSSEGACAAYWTYGRFRTKAARPQKEAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQZ5</accession>
    <name>A0A0M7AQZ5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04954</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000037">
        <property type="protein sequence ID" value="CTQ77565.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77565">
        <property type="protein sequence ID" value="CTQ77565"/>
        <property type="gene ID" value="LAX5112_04954"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ77565.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="114" mass="12799" checksum="95FC3469AF322998" modified="2015-12-09" version="1">MATFKNFRQGPAQEVLARIGFDLSRCLGWQDFRSEFVEQNRSIRDKYPDNCLIDRAQSLGAVLSTGERAVLHAALAAADFAHVADDLWSWGKVDLLDQPHREAVAATILREDEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AR24</accession>
    <name>A0A0M7AR24_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Helix-turn-helix domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04537</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000025">
        <property type="protein sequence ID" value="CTQ76253.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008195211.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000025.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04537"/>
    <dbReference type="EnsemblBacteria" id="CTQ76253">
        <property type="protein sequence ID" value="CTQ76253"/>
        <property type="gene ID" value="LAX5112_04537"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001845">
        <property type="entry name" value="HTH_ArsR_DNA-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00778">
        <property type="entry name" value="HTHARSR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00418">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50987">
        <property type="entry name" value="HTH_ARSR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH arsR-type" evidence="1">
        <location>
            <begin position="1"/>
            <end position="94"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50987"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76253.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="228" mass="24454" checksum="C23CA22FBB79E434" modified="2015-12-09" version="1">MKDGPDIARIGGLIGDPARANILSALMSGKALTATELAVEAGITGQTASSHLKKLMEGGLLTQAKQGRHRYFTLAGPEVGTTLEALMGLAANKGHLRTRTGPRDPAMRTARVCYDHLAGDMAVRIYDSLETRGFLTTSSDAGGIALTETGEAFLATIGVDLLPLKAARRPMCRPCLDWSERRNHLAGAVGAALLSRFQQNKWLRREPDSRVVHISQKGDAELKALFPI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASF3</accession>
    <name>A0A0M7ASF3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04890</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000034">
        <property type="protein sequence ID" value="CTQ77382.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77382">
        <property type="protein sequence ID" value="CTQ77382"/>
        <property type="gene ID" value="LAX5112_04890"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ77382.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="113" mass="12204" checksum="AEBF91C61C3B4263" modified="2015-12-09" version="1">MAWRCVSGIFECPIPPRISTNVVNKFEGGIAGEICGSVYGCLKQHQLRLEKPDINAIVQMSVQLSSNKIRLKCHKASGTDSGFSSVTAPAMAAFWAGVSSRNTRNKKSSCADR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZMS7</accession>
    <name>A0A0M6ZMS7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 5 7">30S ribosomal protein S9</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 8" type="primary">rpsI</name>
        <name evidence="8" type="ORF">LAX5112_00022</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 5 6">Belongs to the universal ribosomal protein uS9 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63657.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670085.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00022"/>
    <dbReference type="EnsemblBacteria" id="CTQ63657">
        <property type="protein sequence ID" value="CTQ63657"/>
        <property type="gene ID" value="LAX5112_00022"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00532_B">
        <property type="entry name" value="Ribosomal_S9_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014721">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold_subgr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000754">
        <property type="entry name" value="Ribosomal_S9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023035">
        <property type="entry name" value="Ribosomal_S9_bac/plastid"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020574">
        <property type="entry name" value="Ribosomal_S9_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21569">
        <property type="entry name" value="PTHR21569"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00380">
        <property type="entry name" value="Ribosomal_S9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="SSF54211"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00360">
        <property type="entry name" value="RIBOSOMAL_S9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5 6" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3 5 6" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00016789"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00532"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003815"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003816"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ63657.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="158" mass="17486" checksum="67588476D53AB629" modified="2015-12-09" version="1">MAELQSLEELGGAVDTAAPEAPVHVQKLDAQGRAYATGKRKDAIARVWVKPGTGKIIVNKKDFTEYFARPVLQMILRQPLMITERDGQFDIVATVTGGGLSGQAGAVRHGLSKALTYYEPDLRPVLKKNGFITRDSRVVERKKFGRAKARKSFQFSKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZNL8</accession>
    <name>A0A0M6ZNL8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">TRAP transporter solute receptor, DctP family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_00271</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the bacterial solute-binding protein 7 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64365.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670252.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00271"/>
    <dbReference type="EnsemblBacteria" id="CTQ64365">
        <property type="protein sequence ID" value="CTQ64365"/>
        <property type="gene ID" value="LAX5112_00271"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071702">
        <property type="term" value="P:organic substance transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.190.170">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018389">
        <property type="entry name" value="DctP_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038404">
        <property type="entry name" value="TRAP_DctP_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33376">
        <property type="entry name" value="PTHR33376"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03480">
        <property type="entry name" value="DctP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0675">Receptor</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809157" evidence="3">
        <location>
            <begin position="24"/>
            <end position="348"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ64365.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="348" mass="36712" checksum="06264832AB046F34" modified="2015-12-09" version="1">MKKLTILSAVSAIALSMGTTAQAEELAVVGSWSGLPLHKQFEAPFWNDKLGEVSGGELSASLTTHDQMGISGGDVYRMMSQGVFDVGMTVADYAVSDSVALEALDVPMIATDAETAKKAVDAARPMVDDIYKDVFNAKVLGIAPYPPQVVFCNAEINSLDDLQGKKVRASGRMTAKFLEALGAEGVNIGFGEVPGALQRGVVDCAITGAGSGYNAGWWEVSTHLLPIPLGGWDPVVTAINLDKWNTLSDAQKAALEKGVKENLEDPAWEVAQNALNNDIACLTGNGECPYGDARGLVLVEATDEDQAKAKAVLISEVLPDWAERAGGDWAQRWSDSVGKVTGVSLDAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPD3</accession>
    <name>A0A0M6ZPD3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">5'-nucleotidase SurE</fullName>
            <ecNumber evidence="5">3.1.3.5</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Nucleoside 5'-monophosphate phosphohydrolase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5 7" type="primary">surE</name>
        <name evidence="7" type="ORF">LAX5112_00178</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 5">
            <text>a ribonucleoside 5'-phosphate + H2O = a ribonucleoside + phosphate</text>
            <dbReference type="Rhea" id="RHEA:12484"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:18254"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58043"/>
            <dbReference type="EC" id="3.1.3.5"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="5">
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </cofactor>
        <text evidence="5">Binds 1 divalent metal cation per subunit.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the SurE nucleotidase family.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.5" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64101.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670188.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00178"/>
    <dbReference type="EnsemblBacteria" id="CTQ64101">
        <property type="protein sequence ID" value="CTQ64101"/>
        <property type="gene ID" value="LAX5112_00178"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0106411">
        <property type="term" value="F:XMP 5'-nucleosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1210.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00060">
        <property type="entry name" value="SurE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030048">
        <property type="entry name" value="SurE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002828">
        <property type="entry name" value="SurE-like_Pase/nucleotidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036523">
        <property type="entry name" value="SurE-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30457">
        <property type="entry name" value="PTHR30457"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01975">
        <property type="entry name" value="SurE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64167">
        <property type="entry name" value="SSF64167"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00087">
        <property type="entry name" value="surE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 5 7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3 5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SurE" evidence="6">
        <location>
            <begin position="3"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="8"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="9"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="40"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="92"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000815"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011062"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00060"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF01975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ64101.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="252" mass="27300" checksum="FEC2E2E34C7FD3AD" modified="2015-12-09" version="1">MRILITNDDGIHSSGLYALERIARTLSEDVWVIAPETDQSGVAHSLTLGDPLRLRQIDDRHFAVKGTPTDCVIMGCRKVLPGLPDLVLSGINRGQNLAEDVTYSGTVAGAMEAAILGIRSIAVSQAYSWNPKSEPDYGVAEAHAPELFKKLMTFDLPPYSLLNVNFPVGPADAVKGVKITVQGHHEQSGLSIDERTDGRGNPYYWLKFQDRGKSVLDNSDLHAVADGYVSVTPLRIDLTAHDLVGRLADSLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQU8</accession>
    <name>A0A0M6ZQU8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Lipid-A-disaccharide synthase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_00099</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63874.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008191718.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00099"/>
    <dbReference type="EnsemblBacteria" id="CTQ63874">
        <property type="protein sequence ID" value="CTQ63874"/>
        <property type="gene ID" value="LAX5112_00099"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008915">
        <property type="term" value="F:lipid-A-disaccharide synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009245">
        <property type="term" value="P:lipid A biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011499">
        <property type="entry name" value="Lipid_A_biosynth_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014546">
        <property type="entry name" value="UCP028440_lipidA_biosyn"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07578">
        <property type="entry name" value="LAB_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF028440">
        <property type="entry name" value="UCP_LAB_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01259">
        <property type="entry name" value="LAB_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="48"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="75"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="domain" description="LAB_N" evidence="2">
        <location>
            <begin position="22"/>
            <end position="93"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM01259"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ63874.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="104" mass="12127" checksum="D07F89964A6C416F" modified="2015-12-09" version="1">MAALIDWFHAVFIAQFDFWLIFGLAAQSMFMMRFVVQWMASERVGRSIVPIAFWFFSIAGGIMLFTYGVIKKEPIIILGQGLGLVIYFRNLWLIFKEKRRDPAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZR83</accession>
    <name>A0A0M6ZR83_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Bifunctional protein PutA</fullName>
        </recommendedName>
        <domain>
            <recommendedName>
                <fullName evidence="2">Proline dehydrogenase</fullName>
                <ecNumber evidence="2">1.5.5.2</ecNumber>
            </recommendedName>
            <alternativeName>
                <fullName evidence="2">Proline oxidase</fullName>
            </alternativeName>
        </domain>
        <domain>
            <recommendedName>
                <fullName evidence="2">Delta-1-pyrroline-5-carboxylate dehydrogenase</fullName>
                <shortName evidence="2">P5C dehydrogenase</shortName>
                <ecNumber evidence="2">1.2.1.88</ecNumber>
            </recommendedName>
            <alternativeName>
                <fullName evidence="2">L-glutamate gamma-semialdehyde dehydrogenase</fullName>
            </alternativeName>
        </domain>
    </protein>
    <gene>
        <name evidence="8" type="primary">putA</name>
        <name evidence="8" type="ORF">LAX5112_00575</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Oxidizes proline to glutamate for use as a carbon and nitrogen source.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>H2O + L-glutamate 5-semialdehyde + NAD(+) = 2 H(+) + L-glutamate + NADH</text>
            <dbReference type="Rhea" id="RHEA:30235"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:58066"/>
            <dbReference type="EC" id="1.2.1.88"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>a quinone + L-proline = (S)-1-pyrroline-5-carboxylate + a quinol + H(+)</text>
            <dbReference type="Rhea" id="RHEA:23784"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17388"/>
            <dbReference type="ChEBI" id="CHEBI:24646"/>
            <dbReference type="ChEBI" id="CHEBI:60039"/>
            <dbReference type="ChEBI" id="CHEBI:132124"/>
            <dbReference type="EC" id="1.5.5.2"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="2">Amino-acid degradation; L-proline degradation into L-glutamate; L-glutamate from L-proline: step 1/2.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2">Amino-acid degradation; L-proline degradation into L-glutamate; L-glutamate from L-proline: step 2/2.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">In the C-terminal section; belongs to the aldehyde dehydrogenase family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">In the N-terminal section; belongs to the proline dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.5.5.2" evidence="2"/>
    <dbReference type="EC" id="1.2.1.88" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65289.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670562.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00575"/>
    <dbReference type="EnsemblBacteria" id="CTQ65289">
        <property type="protein sequence ID" value="CTQ65289"/>
        <property type="gene ID" value="LAX5112_00575"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00261">
        <property type="reaction ID" value="UER00373"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003842">
        <property type="term" value="F:1-pyrroline-5-carboxylate dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016620">
        <property type="term" value="F:oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004657">
        <property type="term" value="F:proline dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006561">
        <property type="term" value="P:proline biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010133">
        <property type="term" value="P:proline catabolic process to glutamate"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.309.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.605.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016161">
        <property type="entry name" value="Ald_DH/histidinol_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016163">
        <property type="entry name" value="Ald_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016160">
        <property type="entry name" value="Ald_DH_CS_CYS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016162">
        <property type="entry name" value="Ald_DH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015590">
        <property type="entry name" value="Aldehyde_DH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025703">
        <property type="entry name" value="Bifunct_PutA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005933">
        <property type="entry name" value="Delta1-pyrroline-5-COlate_DH-3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029041">
        <property type="entry name" value="FAD-linked_oxidoreductase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024089">
        <property type="entry name" value="PRODH_PutA_dom_I/II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024082">
        <property type="entry name" value="PRODH_PutA_dom_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002872">
        <property type="entry name" value="Proline_DH_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00171">
        <property type="entry name" value="Aldedh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01619">
        <property type="entry name" value="Pro_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14850">
        <property type="entry name" value="Pro_dh-DNA_bdg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000197">
        <property type="entry name" value="Bifunct_PutA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51730">
        <property type="entry name" value="SSF51730"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53720">
        <property type="entry name" value="SSF53720"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81935">
        <property type="entry name" value="SSF81935"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01238">
        <property type="entry name" value="D1pyr5carbox3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00070">
        <property type="entry name" value="ALDEHYDE_DEHYDR_CYS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2" id="KW-0274">FAD</keyword>
    <keyword evidence="2" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="2" id="KW-0520">NAD</keyword>
    <keyword evidence="1 2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-0642">Proline metabolism</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0678">Repressor</keyword>
    <keyword evidence="2" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="Pro_dh-DNA_bdg" evidence="7">
        <location>
            <begin position="69"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="domain" description="Pro_dh" evidence="6">
        <location>
            <begin position="189"/>
            <end position="480"/>
        </location>
    </feature>
    <feature type="domain" description="Aldedh" evidence="5">
        <location>
            <begin position="568"/>
            <end position="1022"/>
        </location>
    </feature>
    <feature type="active site" evidence="3">
        <location>
            <position position="799"/>
        </location>
    </feature>
    <feature type="active site" evidence="3 4">
        <location>
            <position position="833"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRNR" id="PIRNR000197"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR000197-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF01619"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF14850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ65289.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="1046" mass="113022" checksum="693C9FFFD93146A6" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSD5</accession>
    <name>A0A0M6ZSD5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Asparagine synthetase [glutamine-hydrolyzing] 1</fullName>
            <ecNumber evidence="8">6.3.5.4</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">asnB</name>
        <name evidence="8" type="ORF">LAX5112_00701</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the asparagine synthetase family.</text>
    </comment>
    <dbReference type="EC" id="6.3.5.4" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65628.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670640.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00701"/>
    <dbReference type="EnsemblBacteria" id="CTQ65628">
        <property type="protein sequence ID" value="CTQ65628"/>
        <property type="gene ID" value="LAX5112_00701"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004066">
        <property type="term" value="F:asparagine synthase (glutamine-hydrolyzing) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006529">
        <property type="term" value="P:asparagine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006541">
        <property type="term" value="P:glutamine metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01991">
        <property type="entry name" value="Asn_Synthase_B_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00712">
        <property type="entry name" value="AsnB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006426">
        <property type="entry name" value="Asn_synth_AEB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001962">
        <property type="entry name" value="Asn_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033738">
        <property type="entry name" value="AsnB_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017535">
        <property type="entry name" value="Asparagine_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017932">
        <property type="entry name" value="GATase_2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029055">
        <property type="entry name" value="Ntn_hydrolases_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00733">
        <property type="entry name" value="Asn_synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13537">
        <property type="entry name" value="GATase_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001589">
        <property type="entry name" value="Asn_synthetase_glu-h"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56235">
        <property type="entry name" value="SSF56235"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01536">
        <property type="entry name" value="asn_synth_AEB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03104">
        <property type="entry name" value="trio_amidotrans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51278">
        <property type="entry name" value="GATASE_TYPE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="5" id="KW-0061">Asparagine biosynthesis</keyword>
    <keyword evidence="3 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 5" id="KW-0315">Glutamine amidotransferase</keyword>
    <keyword evidence="8" id="KW-0436">Ligase</keyword>
    <keyword evidence="2 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glutamine amidotransferase type-2" evidence="7">
        <location>
            <begin position="2"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="active site" description="For GATase activity" evidence="5">
        <location>
            <position position="2"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="100"/>
        </location>
        <ligand>
            <name>L-glutamine</name>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="266"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="293"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="369"/>
            <end position="370"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005752"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR001589-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR001589-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51278"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ65628.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="591" mass="66051" checksum="45BD489186BFDAB5" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSH6</accession>
    <name>A0A0M6ZSH6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Staphylococcal accessory regulator family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00533</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65166.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008190665.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00533"/>
    <dbReference type="EnsemblBacteria" id="CTQ65166">
        <property type="protein sequence ID" value="CTQ65166"/>
        <property type="gene ID" value="LAX5112_00533"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000835">
        <property type="entry name" value="HTH_MarR-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12802">
        <property type="entry name" value="MarR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00347">
        <property type="entry name" value="HTH_MARR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50995">
        <property type="entry name" value="HTH_MARR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH marR-type" evidence="1">
        <location>
            <begin position="1"/>
            <end position="116"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65166.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="116" mass="12835" checksum="3784ECDE7E55B6FC" modified="2015-12-09" version="1">MGIEIRGAQALRLMHEVNLALVRGSDQDLSARQLTILLTVYLEPPPHTVRGLAAKLNVTKPAITRALDTLGSMRLLSRKRDEADKRNVIITRTVEGALYLEQLGDLVVEKAAELPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSL4</accession>
    <name>A0A0M6ZSL4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Alkyl hydroperoxide reductase C</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Peroxiredoxin</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="8">Thioredoxin peroxidase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="primary">tsaA</name>
        <name evidence="11" type="ORF">LAX5112_00746</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the peroxiredoxin family. Prx6 subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65759.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670673.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00746"/>
    <dbReference type="EnsemblBacteria" id="CTQ65759">
        <property type="protein sequence ID" value="CTQ65759"/>
        <property type="gene ID" value="LAX5112_00746"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008379">
        <property type="term" value="F:thioredoxin peroxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03016">
        <property type="entry name" value="PRX_1cys"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000866">
        <property type="entry name" value="AhpC/TSA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024706">
        <property type="entry name" value="Peroxiredoxin_AhpC-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019479">
        <property type="entry name" value="Peroxiredoxin_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045020">
        <property type="entry name" value="PRX_1cys"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013766">
        <property type="entry name" value="Thioredoxin_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10417">
        <property type="entry name" value="1-cysPrx_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00578">
        <property type="entry name" value="AhpC-TSA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000239">
        <property type="entry name" value="AHPC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51352">
        <property type="entry name" value="THIOREDOXIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0049">Antioxidant</keyword>
    <keyword evidence="5 11" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3 11" id="KW-0575">Peroxidase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Thioredoxin" evidence="10">
        <location>
            <begin position="3"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="active site" description="Cysteine sulfenic acid (-SOH) intermediate" evidence="9">
        <location>
            <position position="45"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009796"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00017462"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022862"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00025719"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00032077"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00032824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR000239-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ65759.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="216" mass="23448" checksum="5F11C0A144D5CB67" modified="2015-12-09" version="1">MSLRINDVVPNFTAETDQGQITFHDWIGDSWAILFSHPKDFTPVCTTEFGAVAQLAAEWEKRGTKVIGVSVDSAEDHKKWKTDIEKVGGAAAGFPIIADEGLAVSKAFDMLPAEAYLPDGRTPADSATVRSVFIIGPDKQLKLSMTYPMTVGRNFAEVLRALDALQTSAKGVATPANWEFGQDVIIPPSVSDEDAKAKFGTFDAVLPYLRKTKMPV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSP3</accession>
    <name>A0A0M6ZSP3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Sulfate starvation-induced protein 7</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">fliY_1</name>
        <name evidence="4" type="ORF">LAX5112_00748</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65765.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670837.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00748"/>
    <dbReference type="EnsemblBacteria" id="CTQ65765">
        <property type="protein sequence ID" value="CTQ65765"/>
        <property type="gene ID" value="LAX5112_00748"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00062">
        <property type="entry name" value="PBPb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809250" evidence="2">
        <location>
            <begin position="22"/>
            <end position="266"/>
        </location>
    </feature>
    <feature type="domain" description="PBPb" evidence="3">
        <location>
            <begin position="32"/>
            <end position="255"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00062"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ65765.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="266" mass="29263" checksum="C5BE08C0F758C344" modified="2015-12-09" version="1">MFRNFTAAALFSFAAALPTQADTLDDVVDRGELRCGVVLDFPPIGYRDANNEPAGFDVDYCKDLAAALEVEATIYPVTWAERLPVIVTGRADVVFGATSDSLARARTVGFTIPYAIYYAQGVVNADSGIESFEDIRGKRVAGAIGTVPEQEWLKIAEEWGEEHLYQGYQSENEVFLAVAQGKADIGITTNTAVKPITDQYDTVLAGPRMPWTTDYTSVVGKREDVTWLNFLNLFVTHQVRSGRYAELWGKYVGGEAPELRIPGVLY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZT27</accession>
    <name>A0A0M6ZT27_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 10">Ribokinase</fullName>
            <shortName evidence="10">RK</shortName>
            <ecNumber evidence="3 10">2.7.1.15</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10 13" type="primary">rbsK</name>
        <name evidence="13" type="ORF">LAX5112_00782</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 10">
            <text>ATP + D-ribose = ADP + D-ribose 5-phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:13697"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:47013"/>
            <dbReference type="ChEBI" id="CHEBI:78346"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.1.15"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="10">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="10">Requires a divalent cation, most likely magnesium in vivo, as an electrophilic catalyst to aid phosphoryl group transfer. It is the chelate of the metal and the nucleotide that is the actual substrate.</text>
    </comment>
    <comment type="activity regulation">
        <text evidence="10">Activated by a monovalent cation that binds near, but not in, the active site. The most likely occupant of the site in vivo is potassium. Ion binding induces a conformational change that may alter substrate affinity.</text>
    </comment>
    <comment type="pathway">
        <text evidence="10">Carbohydrate metabolism; D-ribose degradation; D-ribose 5-phosphate from beta-D-ribopyranose: step 2/2.</text>
    </comment>
    <comment type="subunit">
        <text evidence="10">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="10">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="10">Belongs to the carbohydrate kinase PfkB family. Ribokinase subfamily.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the carbohydrate kinase pfkB family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.15" evidence="3 10"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65858.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670702.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00782"/>
    <dbReference type="EnsemblBacteria" id="CTQ65858">
        <property type="protein sequence ID" value="CTQ65858"/>
        <property type="gene ID" value="LAX5112_00782"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00916">
        <property type="reaction ID" value="UER00889"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004747">
        <property type="term" value="F:ribokinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019303">
        <property type="term" value="P:D-ribose catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01174">
        <property type="entry name" value="ribokinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1190.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01987">
        <property type="entry name" value="Ribokinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002173">
        <property type="entry name" value="Carboh/pur_kinase_PfkB_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011877">
        <property type="entry name" value="D_ribokin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011611">
        <property type="entry name" value="PfkB_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002139">
        <property type="entry name" value="Ribo/fructo_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029056">
        <property type="entry name" value="Ribokinase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00294">
        <property type="entry name" value="PfkB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00990">
        <property type="entry name" value="RIBOKINASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53613">
        <property type="entry name" value="SSF53613"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02152">
        <property type="entry name" value="D_ribokin_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00584">
        <property type="entry name" value="PFKB_KINASES_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="10" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="10" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7 10 11" id="KW-0418">Kinase</keyword>
    <keyword evidence="8 10" id="KW-0460">Magnesium</keyword>
    <keyword evidence="6 10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9 10" id="KW-0630">Potassium</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 10 11" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PfkB" evidence="12">
        <location>
            <begin position="2"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="10">
        <location>
            <begin position="11"/>
            <end position="13"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="10">
        <location>
            <begin position="39"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="10">
        <location>
            <position position="253"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="139"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="185"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <begin position="221"/>
            <end position="226"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="247"/>
        </location>
        <ligand>
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="249"/>
        </location>
        <ligand>
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <begin position="252"/>
            <end position="253"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="253"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="283"/>
        </location>
        <ligand>
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="286"/>
        </location>
        <ligand>
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="288"/>
        </location>
        <ligand>
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="292"/>
        </location>
        <ligand>
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005380"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012035"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00016943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022958"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01987"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU003704"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF00294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="CTQ65858.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="308" mass="31712" checksum="1CD44979071F3D41" modified="2015-12-09" version="1">MKPVTVVGSINIDLFSYLDRWPKIGETVMVRETANTLGGKGANQAVAATKLGANATMIGAVGEDGFGRVAADQLAAFNVTADLIEQRDCGTGMAFIDVGPEGDNIIRLASGANGQMQPEDLGPHSNQLNQSGVVLLQNEINLETSLKAAELARGGGALVIMDPAPAPHPAWTKDVIAAFDVLTPNASEAGAILGATPETLEEARDGARHLRSFGLSGAIITLGEKGVAWSFGDEDGVEPAPSVTAIDTVAAGDCFNGALATGLSEGASMRSAIRFAMHAAALATTRKGASASLPTRDEVDRFYAPDLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTM4</accession>
    <name>A0A0M6ZTM4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00428</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64864.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ64864">
        <property type="protein sequence ID" value="CTQ64864"/>
        <property type="gene ID" value="LAX5112_00428"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ64864.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="39" mass="4435" checksum="19DF2032541BF5E1" modified="2015-12-09" version="1">MAPVQDRDSGIHIARLRVLPDYELGISASAGYQIWHERI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZU20</accession>
    <name>A0A0M6ZU20_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">sn-glycerol-3-phosphate import ATP-binding protein UgpC</fullName>
            <ecNumber evidence="9">3.6.3.20</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">ugpC_1</name>
        <name evidence="9" type="ORF">LAX5112_00933</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.20" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66275.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ66275">
        <property type="protein sequence ID" value="CTQ66275"/>
        <property type="gene ID" value="LAX5112_00933"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008643">
        <property type="term" value="P:carbohydrate transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03301">
        <property type="entry name" value="ABC_MalK_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015855">
        <property type="entry name" value="ABC_transpr_MalK-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008995">
        <property type="entry name" value="Mo/tungstate-bd_C_term_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013611">
        <property type="entry name" value="Transp-assoc_OB_typ2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08402">
        <property type="entry name" value="TOBE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50331">
        <property type="entry name" value="SSF50331"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 7 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-0472">Membrane</keyword>
    <keyword evidence="4 7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ABC transporter" evidence="8">
        <location>
            <begin position="13"/>
            <end position="243"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="45"/>
            <end position="52"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ66275.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="356" mass="38573" checksum="002C2A025C1C6E1F" modified="2015-12-09" version="1">MTDVNLSSAGKPIVLENISRVWGETVAVDNLSITMPAGSFTALLGPSGCGKSTTLRMIAGLESVSSGSIRIGESDVTHTPSSKRDLSMVFQSYALFPHLSVAENIIFGLKVRRVGRAERDERLRKVADLLGLSQLLERKPGQLSGGQQQRVALGRAIIGEKPICLMDEPLSNLDAKLRHEMRVEIRALQRQLGFTMVYVTHDQVEAITMADQVVLLNKGQLVQAAGPRTLYDRPATPFAARFIGTPPMNLFPAAAFRKLQNAPSHKLGVRPEAMRRQTGGPLEATIRTVEYLGADILADCIVADTAFQVRLATADPVTPGQSIELGFEPDALHVFDAQSGARRDDLVSEIGAQLRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUG0</accession>
    <name>A0A0M6ZUG0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Biofilm growth-associated repressor</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">bigR_2</name>
        <name evidence="2" type="ORF">LAX5112_00946</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66378.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670868.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ66378">
        <property type="protein sequence ID" value="CTQ66378"/>
        <property type="gene ID" value="LAX5112_00946"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001845">
        <property type="entry name" value="HTH_ArsR_DNA-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01022">
        <property type="entry name" value="HTH_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00778">
        <property type="entry name" value="HTHARSR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00418">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50987">
        <property type="entry name" value="HTH_ARSR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH arsR-type" evidence="1">
        <location>
            <begin position="5"/>
            <end position="99"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50987"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66378.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="119" mass="13402" checksum="C46398AAA825C3CD" modified="2015-12-09" version="1">MDYKALEEKAETAAEFMKLMASAPRLLLMCHVMDEERSVGELAEKTGMRMPTVSQQLALLRAQGLVSTRREGTTIYYRLASEPVKDVMAMLYKHFCADAELPVAHHLETLEGDKPSSRQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUN8</accession>
    <name>A0A0M6ZUN8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Carnitine catabolism transcriptional activator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">cdhR_1</name>
        <name evidence="2" type="ORF">LAX5112_00975</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66458.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451824.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ66458">
        <property type="protein sequence ID" value="CTQ66458"/>
        <property type="gene ID" value="LAX5112_00975"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002818">
        <property type="entry name" value="DJ-1/PfpI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01965">
        <property type="entry name" value="DJ-1_PfpI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="SSF52317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="1">
        <location>
            <begin position="223"/>
            <end position="321"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66458.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="344" mass="38874" checksum="2CE247809E443DAB" modified="2015-12-09" version="1">MSGRAHDDSCQKIAFVIMDRFSMNAFASVIEPLRIANRMLGRDYYVWETYSLDGNPVVASNGCEVSVKKSIRDLGDADITLLCTGVDVERLPLDPELGNKLRRLNALGRTFGAICTGAYLLARYNLLDGRRCTIHWENLRSLREEFPDVEVTSDIFSIDRNCITCAGGMASLDMILRLIAIQHGAYLAHEVAEVALYQNMRSGESAQRHDIEARTGISNAKILDAIRIMDLHIEDPLSCQQLAMTVNLSPRQLERLFRRHFNCTPGQYYLRLRLETARDLLRRTSRPVLDVALACGFASTSHFTKCYRERFLCTPTEERQSYQWANTKPTSNVGTATPMRLVAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUP6</accession>
    <name>A0A0M6ZUP6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Carbon monoxide dehydrogenase large chain</fullName>
            <ecNumber evidence="2">1.2.99.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">coxL</name>
        <name evidence="2" type="ORF">LAX5112_00819</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.2.99.2" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65962.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670727.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00819"/>
    <dbReference type="EnsemblBacteria" id="CTQ65962">
        <property type="protein sequence ID" value="CTQ65962"/>
        <property type="gene ID" value="LAX5112_00819"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018492">
        <property type="term" value="F:carbon-monoxide dehydrogenase (acceptor) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005507">
        <property type="term" value="F:copper ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030151">
        <property type="term" value="F:molybdenum ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000674">
        <property type="entry name" value="Ald_Oxase/Xan_DH_a/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036856">
        <property type="entry name" value="Ald_Oxase/Xan_DH_a/b_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016208">
        <property type="entry name" value="Ald_Oxase/xanthine_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008274">
        <property type="entry name" value="AldOxase/xan_DH_Mopterin-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037165">
        <property type="entry name" value="AldOxase/xan_DH_Mopterin-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012780">
        <property type="entry name" value="CO_Mo_DH_lsu"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11908">
        <property type="entry name" value="PTHR11908"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01315">
        <property type="entry name" value="Ald_Xan_dh_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02738">
        <property type="entry name" value="Ald_Xan_dh_C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01008">
        <property type="entry name" value="Ald_Xan_dh_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54665">
        <property type="entry name" value="SSF54665"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56003">
        <property type="entry name" value="SSF56003"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02416">
        <property type="entry name" value="CO_dehy_Mo_lg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ald_Xan_dh_C" evidence="1">
        <location>
            <begin position="32"/>
            <end position="141"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM01008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65962.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="806" mass="88459" checksum="A42315645689297B" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUX5</accession>
    <name>A0A0M6ZUX5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Cytochrome c2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">LAX5112_00843</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66026.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670747.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00843"/>
    <dbReference type="EnsemblBacteria" id="CTQ66026">
        <property type="protein sequence ID" value="CTQ66026"/>
        <property type="gene ID" value="LAX5112_00843"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.760.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009056">
        <property type="entry name" value="Cyt_c-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036909">
        <property type="entry name" value="Cyt_c-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002327">
        <property type="entry name" value="Cyt_c_1A/1B"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11961">
        <property type="entry name" value="PTHR11961"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00034">
        <property type="entry name" value="Cytochrom_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13442">
        <property type="entry name" value="Cytochrome_CBB3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00604">
        <property type="entry name" value="CYTCHRMECIAB"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46626">
        <property type="entry name" value="SSF46626"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51007">
        <property type="entry name" value="CYTC"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 5" id="KW-0349">Heme</keyword>
    <keyword evidence="4 5" id="KW-0408">Iron</keyword>
    <keyword evidence="6" id="KW-0472">Membrane</keyword>
    <keyword evidence="3 5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="21"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="domain" description="Cytochrome c" evidence="7">
        <location>
            <begin position="46"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="domain" description="Cytochrome c" evidence="7">
        <location>
            <begin position="175"/>
            <end position="251"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00433"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ66026.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="253" mass="28004" checksum="20B8735855B19E6E" modified="2015-12-09" version="1">MDQKQEKAERPCADFPTWRHAAWAQATIWIAAAMLLLATPAMASDGDPIKGEKLFKACKACHQVGANARNGVGPHLDGLFERPAGTLEGFKYSSAMKKLGSEGMVWNEFSLDLYLEKPREYVPGTRMSYRGMPDRQDRTHIIAYLRELSKAEPASEPEAETVTPEMGAVAMQINGDMAYGEYLSSECVTCHQVSGRADGIPSIIGWPKKPFIRALFEYKTNVRNHQVMQNMTVNLGNEEIAALAAYFGSIDPQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZV05</accession>
    <name>A0A0M6ZV05_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Lipid A core-O-antigen ligase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">LAX5112_01014</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the O-antigen polymerase family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66568.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670914.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01014"/>
    <dbReference type="EnsemblBacteria" id="CTQ66568">
        <property type="protein sequence ID" value="CTQ66568"/>
        <property type="gene ID" value="LAX5112_01014"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016874">
        <property type="term" value="F:ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007016">
        <property type="entry name" value="O-antigen_ligase-related"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04932">
        <property type="entry name" value="Wzy_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0436">Ligase</keyword>
    <keyword evidence="3 4" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="20"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="47"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="72"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="96"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="130"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="171"/>
            <end position="188"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="195"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="217"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="246"/>
            <end position="266"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="332"/>
            <end position="356"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="363"/>
            <end position="381"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="387"/>
            <end position="403"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005353"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ66568.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="422" mass="46861" checksum="D1100CCEC15C4250" modified="2015-12-09" version="1">MTVWAAQDGRALTAPPPFGLSVRSLGTGALWLAAFLSAFVIEEPAPYELYMVALTVIWLACGLKLRREFAPLIVLMMVFTAGGLASVPFAEDFGDALMYAAVSGFLAITAIFYAAILSDNPERSRIIERGYIIGAVIAALFGIAGYFNLFPGAEYFTRFDRARGTFQDPNVFGPFLVLPTLLLIQRLLRGPTLRNLHVLLPLSILLLGIFLSFSRGAWGVLLASLMLLYTIQLVTEQNLARRGRLILIGMAGVFFCALLMTVALSFEAVSDMFSQRARLVQDYDGGRLGRFARYAIGFQLVMEHPLGLGALEFGKTFGEDEHNVYLKAFTTYGWMGGIAYIVIAIWTACAFFPLIFKSRPWTPFIQAVFAVFIAHLLLSVVIDTDHWRHLFMLYGLAWGLIAADKLERRNWRRSALQTPTPV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVF5</accession>
    <name>A0A0M6ZVF5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Fatty acid metabolism regulator protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">fadR_2</name>
        <name evidence="4" type="ORF">LAX5112_00914</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66221.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670799.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00914"/>
    <dbReference type="EnsemblBacteria" id="CTQ66221">
        <property type="protein sequence ID" value="CTQ66221"/>
        <property type="gene ID" value="LAX5112_00914"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023772">
        <property type="entry name" value="DNA-bd_HTH_TetR-type_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036271">
        <property type="entry name" value="Tet_transcr_reg_TetR-rel_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00440">
        <property type="entry name" value="TetR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00455">
        <property type="entry name" value="HTHTETR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48498">
        <property type="entry name" value="SSF48498"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01081">
        <property type="entry name" value="HTH_TETR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50977">
        <property type="entry name" value="HTH_TETR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH tetR-type" evidence="3">
        <location>
            <begin position="30"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="1">
        <location>
            <begin position="53"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ66221.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="213" mass="23043" checksum="FBBF8AD4575EE388" modified="2015-12-09" version="1">MGNTAAPNKQASVKTSAKAATPQPKTARGEATRRAILAAAERVIGEKGYNDASIGHITSEAGVAQGTFYIYFKTKEQVFSELVLEMGRLVRHSISESTSTLTDHLNVEKAGLTAFLRFARAHPNLYKIVQEALFVDPAAYREYYAKFASGYRVGLTAAVKKGQISEGDAETRAWALMGIARALGEQLVVFNTQKTIPELVDSAHDLIANGLKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXP1</accession>
    <name>A0A0M6ZXP1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01427</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67548.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67548">
        <property type="protein sequence ID" value="CTQ67548"/>
        <property type="gene ID" value="LAX5112_01427"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="237"/>
            <end position="261"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67548.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="261" mass="29335" checksum="1574F2D72C678DB8" modified="2015-12-09" version="1">MTNLRSELDPIVFKRAWGTLDNTFTDNGLTLQRGYDFDLIDALAQKSGIKPLEAQFSTKMHSHTSGRSFWLGVFDTDGLLAGRVCARLDSLRSPESLVDFWRKHFHRCYPTETGAQVELAAKQPRFAQKITGETVYLGGTEVRSDWRGYDLGGLLNRVAQLEALADWDADFYYGWMERKAFKDGFFRACGFTKLYANSIHWQAGGPARLDNDLYLVANHRDDVLDMIDQVLAEPPKAASGSSAKTYEPLEVGDSIPSTTQY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXQ7</accession>
    <name>A0A0M6ZXQ7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Cytochrome c551 peroxidase</fullName>
            <ecNumber evidence="10">1.11.1.5</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">ccpA_2</name>
        <name evidence="10" type="ORF">LAX5112_01109</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </cofactor>
        <text evidence="6">Binds 2 heme groups.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="PTM">
        <text evidence="6">Binds 2 heme groups per subunit.</text>
    </comment>
    <dbReference type="EC" id="1.11.1.5" evidence="10"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66830.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01109"/>
    <dbReference type="EnsemblBacteria" id="CTQ66830">
        <property type="protein sequence ID" value="CTQ66830"/>
        <property type="gene ID" value="LAX5112_01109"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004130">
        <property type="term" value="F:cytochrome-c peroxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.760.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009056">
        <property type="entry name" value="Cyt_c-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036909">
        <property type="entry name" value="Cyt_c-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004852">
        <property type="entry name" value="Di-haem_cyt_c_peroxidsae"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026259">
        <property type="entry name" value="MauG/Cytc_peroxidase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03150">
        <property type="entry name" value="CCP_MauG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000294">
        <property type="entry name" value="Cytochrome-c_peroxidase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46626">
        <property type="entry name" value="SSF46626"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51007">
        <property type="entry name" value="CYTC"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 6 8" id="KW-0349">Heme</keyword>
    <keyword evidence="5 7 8" id="KW-0408">Iron</keyword>
    <keyword evidence="3 7 8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-0574">Periplasm</keyword>
    <keyword evidence="10" id="KW-0575">Peroxidase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cytochrome c" evidence="9">
        <location>
            <begin position="16"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="domain" description="Cytochrome c" evidence="9">
        <location>
            <begin position="232"/>
            <end position="396"/>
        </location>
    </feature>
    <feature type="binding site" description="covalent" evidence="6">
        <location>
            <position position="38"/>
        </location>
        <ligand>
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" description="covalent" evidence="6">
        <location>
            <position position="41"/>
        </location>
        <ligand>
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="7">
        <location>
            <position position="42"/>
        </location>
        <ligand>
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
            <label>1</label>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <feature type="binding site" description="covalent" evidence="6">
        <location>
            <position position="247"/>
        </location>
        <ligand>
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" description="covalent" evidence="6">
        <location>
            <position position="250"/>
        </location>
        <ligand>
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="7">
        <location>
            <position position="251"/>
        </location>
        <ligand>
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
            <label>2</label>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR000294-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR000294-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00433"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ66830.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="420" mass="46096" checksum="C90018CA2DB67022" modified="2015-12-09" version="1">MPAPLTRSDFLEFDRKQAALGQLLFYDKILSGNRNIACATCHHPEFGTGDGLSLGIGEGGKGLGPGRLAGTGESRIKKRIPRNAPGLWNLGAKDLHTLFHDGRISIAETYENGFNSPAEEWLPEGFNSLLAAQAVFPLVAQFEMSGNPKENEIAGAVHDRIDAAWPILAKRVRVIPEYGQMFIEAFNHVESAEDVTIVEIANSLAAFQAIEWQSYDSPFDRYLAGDTEALSAQQKHGLDLFYGKAGCSSCHSGSLLSDQKFHALGLPPFGPGRTRRFDPKVRDTGRMAESDSLEDAYRFRTPMLRNVELTAPYGHNGAYPTLEGIIRHHLDPDGMLAKWDPKLAALPSAPWLETIDFVVWSDSREMARQRLFRDVETIDLSDSEIDAIVDFMKALTGADSVAFPPFGIPTSVPSGLPIDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXU3</accession>
    <name>A0A0M6ZXU3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Beta-lactamase 2</fullName>
            <ecNumber evidence="3">3.5.2.6</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">blm_1</name>
        <name evidence="3" type="ORF">LAX5112_00948</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.5.2.6" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66383.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670870.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00948"/>
    <dbReference type="EnsemblBacteria" id="CTQ66383">
        <property type="protein sequence ID" value="CTQ66383"/>
        <property type="gene ID" value="LAX5112_00948"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008800">
        <property type="term" value="F:beta-lactamase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.15.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001279">
        <property type="entry name" value="Metallo-B-lactamas"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036866">
        <property type="entry name" value="RibonucZ/Hydroxyglut_hydro"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00753">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00849">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56281">
        <property type="entry name" value="SSF56281"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lactamase_B" evidence="2">
        <location>
            <begin position="33"/>
            <end position="219"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="344"/>
            <end position="407"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="385"/>
            <end position="399"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ66383.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="407" mass="43410" checksum="C84C2E1CF2A16558" modified="2015-12-09" version="1">MTTADTSSERELGQDAKIHDLGSGCYAISAEGCPNTGVIVGERGLLVIDAQPTEELGEVFLKKIREISDKPIKVLLLTHFHGDSTAGAAVFEAGEVIASDLSKRMMETRGLDDREVLKARYPDFYPAGHALPALAMPTMTIASSMSIDLGGREVRLMHLGRGHTMGDLVVWVSDSSVLYAGGLVQSNTAPYCGDAHLADWPRALDRIMAFRPSALVPGNGRPAIGSAAVATAIETTRDYVVTLRDAAAACAESKLGLHDTFQSLNDALQPRFGSALLFDAHLPFNVARAYDEAQGLDQPQIWTRERCDDLEDALTRTSPVSQKTEPAVAEDEPVAVDEIVADDSGANVEQDTDETAEAHSEASNELVTDSDFAASLLGGGEEAAADDELLLEDETDQDEQVLEKAGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYW1</accession>
    <name>A0A0M6ZYW1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Ribonuclease 3</fullName>
            <ecNumber evidence="8">3.1.26.3</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">Ribonuclease III</fullName>
            <shortName evidence="8">RNase III</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8 12" type="primary">rnc</name>
        <name evidence="12" type="ORF">LAX5112_01063</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 8">
            <text>Endonucleolytic cleavage to 5'-phosphomonoester.</text>
            <dbReference type="EC" id="3.1.26.3"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="8">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="8">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ribonuclease III family.</text>
    </comment>
    <dbReference type="EC" id="3.1.26.3" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66704.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008195308.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01063"/>
    <dbReference type="EnsemblBacteria" id="CTQ66704">
        <property type="protein sequence ID" value="CTQ66704"/>
        <property type="gene ID" value="LAX5112_01063"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004525">
        <property type="term" value="F:ribonuclease III activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006397">
        <property type="term" value="P:mRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006364">
        <property type="term" value="P:rRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008033">
        <property type="term" value="P:tRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00593">
        <property type="entry name" value="RIBOc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1520.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00104">
        <property type="entry name" value="RNase_III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014720">
        <property type="entry name" value="dsRBD_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011907">
        <property type="entry name" value="RNase_III"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000999">
        <property type="entry name" value="RNase_III_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036389">
        <property type="entry name" value="RNase_III_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11207">
        <property type="entry name" value="PTHR11207"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00035">
        <property type="entry name" value="dsrm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14622">
        <property type="entry name" value="Ribonucleas_3_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00358">
        <property type="entry name" value="DSRM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00535">
        <property type="entry name" value="RIBOc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69065">
        <property type="entry name" value="SSF69065"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02191">
        <property type="entry name" value="RNaseIII"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50137">
        <property type="entry name" value="DS_RBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00517">
        <property type="entry name" value="RNASE_3_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50142">
        <property type="entry name" value="RNASE_3_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 8" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="8 12" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="8" id="KW-0460">Magnesium</keyword>
    <keyword evidence="8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3 8" id="KW-0507">mRNA processing</keyword>
    <keyword evidence="5 8" id="KW-0540">Nuclease</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 8 9" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="8" id="KW-0698">rRNA processing</keyword>
    <keyword evidence="8" id="KW-0699">rRNA-binding</keyword>
    <keyword evidence="4 8" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="RNase III" evidence="11">
        <location>
            <begin position="10"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="domain" description="DRBM" evidence="10">
        <location>
            <begin position="163"/>
            <end position="232"/>
        </location>
    </feature>
    <feature type="active site" evidence="8">
        <location>
            <position position="55"/>
        </location>
    </feature>
    <feature type="active site" evidence="8">
        <location>
            <position position="127"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="51"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="124"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="127"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010183"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022759"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00104"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00266"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50137"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50142"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ66704.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="235" mass="25784" checksum="1A16C3BDDA0D2460" modified="2015-12-09" version="1">MTKDKKQNPIAALKAALAYEFKDLELLRVSLTHASALDPADTVAGSYQRLEFLGDRVLGLVVASMLHHHFPKADEGELARRFNHMVKRETCAEIASELGVGDAMRIGQAEAQTGGRKKTALLADICEAIIAAIYLDGGFEAADEFVRRLWEPRMLSWTGPLRDAKTTLQEWAQSKSLPTPHYEVASREGPDHAPSFTVSVIVQGLKNGEGKGGSKRIAEQHAAEAVLRREGVWKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZ92</accession>
    <name>A0A0M6ZZ92_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">HTH-type transcriptional repressor BepR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">bepR</name>
        <name evidence="3" type="ORF">LAX5112_01653</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68148.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671419.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01653"/>
    <dbReference type="EnsemblBacteria" id="CTQ68148">
        <property type="protein sequence ID" value="CTQ68148"/>
        <property type="gene ID" value="LAX5112_01653"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00440">
        <property type="entry name" value="TetR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00455">
        <property type="entry name" value="HTHTETR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50977">
        <property type="entry name" value="HTH_TETR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH tetR-type" evidence="2">
        <location>
            <begin position="15"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="1">
        <location>
            <begin position="38"/>
            <end position="57"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ68148.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="198" mass="21275" checksum="40C1EF9017FF8B17" modified="2015-12-09" version="1">MQDEKPRRSQAERRAETRKALLDAARALFVEKGYAETGTPEIVKRANVTRGALYHHFEDKPDLMRALVQQEAEAVAAEVASDTNTRQSPLDAFMAGANAYFSALSVPGRAKILLLEGPTVLGLEEMAEIDRTTGGATLLEGLQHSAAHGYLQDVPLEPLAELLSAAFDRAALEIANGADRSAYETATKTLLAGVLATK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZJ8</accession>
    <name>A0A0M6ZZJ8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glyoxalase-like domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01652</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68145.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671418.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01652"/>
    <dbReference type="EnsemblBacteria" id="CTQ68145">
        <property type="protein sequence ID" value="CTQ68145"/>
        <property type="gene ID" value="LAX5112_01652"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029068">
        <property type="entry name" value="Glyas_Bleomycin-R_OHBP_Dase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004360">
        <property type="entry name" value="Glyas_Fos-R_dOase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037523">
        <property type="entry name" value="VOC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00903">
        <property type="entry name" value="Glyoxalase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54593">
        <property type="entry name" value="SSF54593"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51819">
        <property type="entry name" value="VOC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="VOC" evidence="1">
        <location>
            <begin position="4"/>
            <end position="124"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51819"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68145.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="142" mass="16150" checksum="6650AFC5F2CE0169" modified="2015-12-09" version="1">MKCTQYYPVLMTKDVTKTARFYQDHFRFKAVFEADWYVHLQSIEDEAVNLAILDQNHETIPAIRRGQGTGAMLLNFEVEDVDQIYEGAKDAGLPILLALKDEPFGQRHFITEDPNGIMIDVIKPIPPSPEFLKQFAPEAVPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZK5</accession>
    <name>A0A0M6ZZK5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">SUF system FeS assembly protein, NifU family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01448</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67602.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671274.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01448"/>
    <dbReference type="EnsemblBacteria" id="CTQ67602">
        <property type="protein sequence ID" value="CTQ67602"/>
        <property type="gene ID" value="LAX5112_01448"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016226">
        <property type="term" value="P:iron-sulfur cluster assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06664">
        <property type="entry name" value="IscU_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002871">
        <property type="entry name" value="NIF_FeS_clus_asmbl_NifU_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01592">
        <property type="entry name" value="NifU_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NifU_N" evidence="1">
        <location>
            <begin position="6"/>
            <end position="97"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01592"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67602.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="150" mass="15870" checksum="57A3EAFED6C2795B" modified="2015-12-09" version="1">MLDDIYNAKILEFAGNIPRVGRLEHPDGTSKAHSKLCGSTVVVDLCVTDGVVTDFAHDVKACALGQASSSILAQHVVGATEEELRALKITMHAMLKEGGEPPVGRFEDLKFLLPVREYKARHASTLLTFDAVVGALDQAAADTKADGAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZX6</accession>
    <name>A0A0M6ZZX6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01700</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68338.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671471.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01700"/>
    <dbReference type="EnsemblBacteria" id="CTQ68338">
        <property type="protein sequence ID" value="CTQ68338"/>
        <property type="gene ID" value="LAX5112_01700"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.150.10.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001343">
        <property type="entry name" value="Hemolysn_Ca-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011049">
        <property type="entry name" value="Serralysin-like_metalloprot_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00353">
        <property type="entry name" value="HemolysinCabind"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51120">
        <property type="entry name" value="SSF51120"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ68338.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="235" mass="25319" checksum="879B1BCA91C102AF" modified="2015-12-09" version="1">MAVYYSSDTSSDILSGTEYSDIFYSSLYNDMFFGNGGNDTFVVNGIANANSYYGGTGYDTLVANSVSVYQTYMALEINYITGIEEIRSNVIHKDTYIHVGVQSSTSNGFLDLQSVTLVNIDGVRGSFSNDNIYLSQGDDFVDGRAGNDELTGYAGDDTFHFELWYGGDFGHDTITDFSSGDILEFKSNVFADAASVLAAAAQIGADTVITYDANNTITLENVALSSLGSDDFAFV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZX9</accession>
    <name>A0A0M6ZZX9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 5">Flagellar basal body rod protein FlgB</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">flgB</name>
        <name evidence="6" type="ORF">LAX5112_01668</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4 5">Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">The basal body constitutes a major portion of the flagellar organelle and consists of a number of rings mounted on a central rod.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 5">Bacterial flagellum basal body</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the flagella basal body rod proteins family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68189.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01668"/>
    <dbReference type="EnsemblBacteria" id="CTQ68189">
        <property type="protein sequence ID" value="CTQ68189"/>
        <property type="gene ID" value="LAX5112_01668"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030694">
        <property type="term" value="C:bacterial-type flagellum basal body, rod"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071973">
        <property type="term" value="P:bacterial-type flagellum-dependent cell motility"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006300">
        <property type="entry name" value="FlgB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30435:SF12">
        <property type="entry name" value="PTHR30435:SF12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002889">
        <property type="entry name" value="Rod_FlgB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0975">Bacterial flagellum</keyword>
    <keyword evidence="6" id="KW-0966">Cell projection</keyword>
    <keyword evidence="6" id="KW-0969">Cilium</keyword>
    <keyword evidence="6" id="KW-0282">Flagellum</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009677"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00014376"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00024934"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRNR" id="PIRNR002889"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ68189.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="134" mass="14727" checksum="C7B1875BE0385671" modified="2015-12-09" version="1">MAFTDLPLFQALKSKMQWHQTRQGVLAENIANSDSPEFEARDVKAYSFDDHIGREAFGLTTERTSVAHITGVIGSGIGGKAERRDSFEITPSGNAVNLEEQMMKITQNQMDFQAATTLYTKGLGLIRTALSKTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZZ0</accession>
    <name>A0A0M6ZZZ0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Phosphonoacetaldehyde hydrolase</fullName>
            <shortName evidence="1">Phosphonatase</shortName>
            <ecNumber evidence="1">3.11.1.1</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="1">Phosphonoacetaldehyde phosphonohydrolase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="1 2" type="primary">phnX</name>
        <name evidence="2" type="ORF">LAX5112_01432</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Involved in phosphonate degradation.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>H2O + phosphonoacetaldehyde = acetaldehyde + H(+) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:18905"/>
            <dbReference type="ChEBI" id="CHEBI:15343"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58383"/>
            <dbReference type="EC" id="3.11.1.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="1">Binds 1 Mg(2+) ion per subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="1">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the HAD-like hydrolase superfamily. PhnX family.</text>
    </comment>
    <dbReference type="EC" id="3.11.1.1" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67560.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671261.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01432"/>
    <dbReference type="EnsemblBacteria" id="CTQ67560">
        <property type="protein sequence ID" value="CTQ67560"/>
        <property type="gene ID" value="LAX5112_01432"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050194">
        <property type="term" value="F:phosphonoacetaldehyde hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019700">
        <property type="term" value="P:organic phosphonate catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.240">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01375">
        <property type="entry name" value="PhnX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023198">
        <property type="entry name" value="PGP-like_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006323">
        <property type="entry name" value="Phosphonoacetald_hydro"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01422">
        <property type="entry name" value="phosphonatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0460">Magnesium</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0704">Schiff base</keyword>
    <feature type="active site" description="Nucleophile" evidence="1">
        <location>
            <position position="10"/>
        </location>
    </feature>
    <feature type="active site" description="Schiff-base intermediate with substrate" evidence="1">
        <location>
            <position position="51"/>
        </location>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="10"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="12"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="184"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01375"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67560.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="260" mass="27997" checksum="2856095C1CDB5C46" modified="2015-12-09" version="1">MSKFKAVVFDWAGTMIDFGSFAPMGVFVKAFEKFGITASIDQARGPMGMPKWDHIRSMMDDPDISAQWQAKYGSAPTDADVDKIYEIFVPMNEEVVTDYADLVPGALDTIAYLRSNNVKIGSTTGYTRSIMERVLPRAAEQGYEPDNLVCSDDLPEGRPGPLGMYQCFVDLVAYPPSAVIKVDDTEPGIAEGVAAGCITVGLALSGNFAGKNPEELAALSEAEIDAIRQEATAKLKEAGADHVIDTVADLPKLMDQMEAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A068</accession>
    <name>A0A0M7A068_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">tRNA-cytidine(32) 2-sulfurtransferase</fullName>
            <ecNumber evidence="6">2.8.1.-</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Two-thiocytidine biosynthesis protein A</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">tRNA 2-thiocytidine biosynthesis protein TtcA</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6 8" type="primary">ttcA</name>
        <name evidence="8" type="ORF">LAX5112_01586</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine/cysteine desulfurase (IscS) system.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>AH2 + ATP + cytidine(32) in tRNA + S-sulfanyl-L-cysteinyl-[cysteine desulfurase] = 2-thiocytidine(32) in tRNA + A + AMP + diphosphate + H(+) + L-cysteinyl-[cysteine desulfurase]</text>
            <dbReference type="Rhea" id="RHEA:57048"/>
            <dbReference type="Rhea" id="RHEA-COMP:10288"/>
            <dbReference type="Rhea" id="RHEA-COMP:12157"/>
            <dbReference type="Rhea" id="RHEA-COMP:12158"/>
            <dbReference type="Rhea" id="RHEA-COMP:14821"/>
            <dbReference type="ChEBI" id="CHEBI:13193"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17499"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:61963"/>
            <dbReference type="ChEBI" id="CHEBI:82748"/>
            <dbReference type="ChEBI" id="CHEBI:141453"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
        <text evidence="6">Binds 1 [4Fe-4S] cluster per subunit. The cluster is chelated by three Cys residues, the fourth Fe has a free coordination site that may bind a sulfur atom transferred from the persulfide of IscS.</text>
    </comment>
    <comment type="pathway">
        <text evidence="6">tRNA modification.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="miscellaneous">
        <text evidence="6">The thiolation reaction likely consists of two steps: a first activation step by ATP to form an adenylated intermediate of the target base of tRNA, and a second nucleophilic substitution step of the sulfur (S) atom supplied by the hydrosulfide attached to the Fe-S cluster.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the TtcA family.</text>
    </comment>
    <dbReference type="EC" id="2.8.1.-" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67961.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01586"/>
    <dbReference type="EnsemblBacteria" id="CTQ67961">
        <property type="protein sequence ID" value="CTQ67961"/>
        <property type="gene ID" value="LAX5112_01586"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00629">
        <property type="reaction ID" value="UER00684"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016783">
        <property type="term" value="F:sulfurtransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034227">
        <property type="term" value="P:tRNA thio-modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01850">
        <property type="entry name" value="TtcA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011063">
        <property type="entry name" value="TilS/TtcA_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012089">
        <property type="entry name" value="tRNA_Cyd_32_2_STrfase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01171">
        <property type="entry name" value="ATP_bind_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 6" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 6" id="KW-0408">Iron</keyword>
    <keyword evidence="5 6" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="6" id="KW-0460">Magnesium</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="2 6" id="KW-0808">Transferase</keyword>
    <keyword evidence="3 6" id="KW-0819">tRNA processing</keyword>
    <keyword evidence="6" id="KW-0820">tRNA-binding</keyword>
    <feature type="domain" description="ATP_bind_3" evidence="7">
        <location>
            <begin position="92"/>
            <end position="251"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="PP-loop motif" evidence="6">
        <location>
            <begin position="97"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="172"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="175"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="263"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF01171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ67961.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="347" mass="39018" checksum="F537C9BFD8AEBC8E" modified="2015-12-09" version="1">MMEGNNPPRVLGLETAIRYVSRQLFPDTVPGHQIMNDIADSTNIDVPALLRKAPSSVEFKKLRKRLLRQAREAISDFGMVPEGASETNRPRWLVCLSGGKDSYTLLAVLIELKWRGLLPVDLVACNLDQAQPGFPPEILPKFFEDNGIEHIIVREDTYSIVTNKIPEHRTYCSLCSRLRRGILYRVAREQGCEAIVLGHHRDDILETFFMNLFHGGRLASMPPKLINDEGDLLVLRPLAYAAERDIQKFSDGMEFPIIPCNLCGSQDGLQREEVKRMLQAWERETPGRLGVMARALGHTRPSHLLDRKLYDFVNLRPQEGVGKESSSEAEEPCGASLAMTAKLFAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0A6</accession>
    <name>A0A0M7A0A6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01609</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the AHA1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68027.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671388.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01609"/>
    <dbReference type="EnsemblBacteria" id="CTQ68027">
        <property type="protein sequence ID" value="CTQ68027"/>
        <property type="gene ID" value="LAX5112_01609"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.530.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013538">
        <property type="entry name" value="Activator_of_Hsp90_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023393">
        <property type="entry name" value="START-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08327">
        <property type="entry name" value="AHSA1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006817"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68027.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="162" mass="18263" checksum="1460F583C5491FF4" modified="2015-12-09" version="1">MTAQPLERDFLKSAPGQEPILVEGLFRATPARVFQAFTVPEEINDWFLPAGRLADVEIDLKVGGLWRFVLQNDHEKQERLEGEYLEIAAPNLLKFSWRHVVELADGTRQETDRSFVSISFKAAGSATQVRLRHEAIKTEDARLGVGTGWADCLHRMTGFLAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0M8</accession>
    <name>A0A0M7A0M8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01647</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68131.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008196773.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01647"/>
    <dbReference type="EnsemblBacteria" id="CTQ68131">
        <property type="protein sequence ID" value="CTQ68131"/>
        <property type="gene ID" value="LAX5112_01647"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="187"/>
            <end position="239"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68131.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="401" mass="44205" checksum="76D1272945EEA11C" modified="2015-12-09" version="1">MVEENSQGTAVQTPAPAGGFSPLQYLDRALTTLRDIGITPETESDAPINALLEQISDLSPDKVLIISRTLGQASNFNEVVRNQVQQMDIGERYEEITDAFNSIRDDAKALVDQLADGKISFTENLSNKWRDMRRGTISDRFTDIRTTYKDVAKATKDQIEREQTILEAYRDFRGALKQAEVTALELLNMATAKLDAAKSALEGASAEVEAYAGDDAAQKARLELARDERLREMQDEEKRYQIAKDLSDNLTVGYNTSEVIMARLVQTTNAKERVYAQSVSFFSTNESVLTALNASFTGLQGLHESTETLNAMKDGINKSLETLAEIGDAVQKEALKAGYGPTVAAASVKKLVDSVVNFQVQSREIISEMRDMSTKNSEEIRNAVEDGKRRLAKLTAEGQGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1F8</accession>
    <name>A0A0M7A1F8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Cytoplasmic glycerophosphodiester phosphodiesterase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01846</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68689.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671554.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01846"/>
    <dbReference type="EnsemblBacteria" id="CTQ68689">
        <property type="protein sequence ID" value="CTQ68689"/>
        <property type="gene ID" value="LAX5112_01846"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008081">
        <property type="term" value="F:phosphoric diester hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006629">
        <property type="term" value="P:lipid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.190">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030395">
        <property type="entry name" value="GP_PDE_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017946">
        <property type="entry name" value="PLC-like_Pdiesterase_TIM-brl"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03009">
        <property type="entry name" value="GDPD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51695">
        <property type="entry name" value="SSF51695"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51704">
        <property type="entry name" value="GP_PDE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GP-PDE" evidence="1">
        <location>
            <begin position="10"/>
            <end position="253"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51704"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68689.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="253" mass="28213" checksum="6CFB59EF4170CA8F" modified="2015-12-09" version="1">MSPELAAIFARPIAHRGYHDASNGIIENTPTAIQQAVDKDYGIEVDVQQTSDGEALVFHDDDLDRLADGSGPVSGRSSADLVKLQMRTGTDHLWLLQDLFDLVDGRVPLVVEIKSLLRRDAQGDFVRRVVDQVDAYKGPACIKTFDPDMLAVAKQHNNSVLRGIVADAARPGPDYTRHSRMDRFILRHLLHFPRTSPHFISYGVNDLPSPGPSMMKKVFKTPIMAWTVRTPGQLEVAKRFADQIVFEGFDPDR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A213</accession>
    <name>A0A0M7A213_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Putative fluoride ion transporter CrcB</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">crcB</name>
        <name evidence="11" type="ORF">LAX5112_01757</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 10">Important for reducing fluoride concentration in the cell, thus reducing its toxicity.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="10">Cell membrane</location>
            <topology evidence="10">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 10">Belongs to the CrcB (TC 9.B.71) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68486.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671487.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01757"/>
    <dbReference type="EnsemblBacteria" id="CTQ68486">
        <property type="protein sequence ID" value="CTQ68486"/>
        <property type="gene ID" value="LAX5112_01757"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:1903425">
        <property type="term" value="F:fluoride transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00454">
        <property type="entry name" value="CrcB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003691">
        <property type="entry name" value="CrcB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR28259">
        <property type="entry name" value="PTHR28259"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02537">
        <property type="entry name" value="CRCB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00494">
        <property type="entry name" value="crcB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="5 10" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="9 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8 10" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4 10" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="33"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="68"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="98"/>
            <end position="122"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007610"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022519"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00454"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ68486.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="127" mass="13299" checksum="5786A50A0C85D9A5" modified="2015-12-09" version="1">MYHLLLVMIGGGFGAGGRHLVSMATLRLFGPGFPVGTLAVNVIGSLAMGLFIGWLVKHEAAHLQPLRYFLATGLLGGFTTFSAFSLDTSVLWERGDTMLALIYVAGSVVLSILAVFAGLAVMRIGGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2X5</accession>
    <name>A0A0M7A2X5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Glutathione peroxidase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">bsaA</name>
        <name evidence="7" type="ORF">LAX5112_02106</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the glutathione peroxidase family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69415.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671769.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02106"/>
    <dbReference type="EnsemblBacteria" id="CTQ69415">
        <property type="protein sequence ID" value="CTQ69415"/>
        <property type="gene ID" value="LAX5112_02106"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004602">
        <property type="term" value="F:glutathione peroxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006979">
        <property type="term" value="P:response to oxidative stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00340">
        <property type="entry name" value="GSH_Peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000889">
        <property type="entry name" value="Glutathione_peroxidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11592">
        <property type="entry name" value="PTHR11592"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00255">
        <property type="entry name" value="GSHPx"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000303">
        <property type="entry name" value="Glutathion_perox"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01011">
        <property type="entry name" value="GLUTPROXDASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51355">
        <property type="entry name" value="GLUTATHIONE_PEROXID_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2 5" id="KW-0575">Peroxidase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="6">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809204" description="Glutathione peroxidase" evidence="6">
        <location>
            <begin position="24"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="active site" evidence="4">
        <location>
            <position position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006926"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR000303-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU000499"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ69415.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="196" mass="20972" checksum="3400350EB6D441F8" modified="2015-12-09" version="1">MTRFAPAAVFISGILAATGQAVAADPATQTGSAHDFSFELANGLSLPMKEYEGKVVLVVNTATACGFSGQLSGLQELHERYAEQGLVVLGVPSNDFGGQEPRKDSEIAAYCEAKYGATFQMTAKTSVRGDTAHPFYQWAVEEFGSLARPNWNFHKYLVGPDGSLVSWFGTPAKPTSKAVVAEIEKYLDQLPADQSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A311</accession>
    <name>A0A0M7A311_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">GBBH-like_N domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_01963</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68997.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671644.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01963"/>
    <dbReference type="EnsemblBacteria" id="CTQ68997">
        <property type="protein sequence ID" value="CTQ68997"/>
        <property type="gene ID" value="LAX5112_01963"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.2020.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010376">
        <property type="entry name" value="GBBH-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038492">
        <property type="entry name" value="GBBH-like_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06155">
        <property type="entry name" value="GBBH-like_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0408">Iron</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GBBH-like_N" evidence="3">
        <location>
            <begin position="13"/>
            <end position="95"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF06155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ68997.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="120" mass="13427" checksum="8D42A8DF70FDCBD9" modified="2015-12-09" version="1">MTDSSAPWPTELRVSKDRKTLTVAFNDGEQHELSAEYLRVCSPSAEVKGHAPSQKKTVPGKKNVGIMKIDPVGNYAVRIHFDDLHNSGIFSWTYLLELATDRSKHWGGYLQELGEKGLSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A375</accession>
    <name>A0A0M7A375_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Gcv operon activator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">gcvA_7</name>
        <name evidence="3" type="ORF">LAX5112_01939</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68932.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01939"/>
    <dbReference type="EnsemblBacteria" id="CTQ68932">
        <property type="protein sequence ID" value="CTQ68932"/>
        <property type="gene ID" value="LAX5112_01939"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00039">
        <property type="entry name" value="HTHLYSR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="7"/>
            <end position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ68932.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="298" mass="32948" checksum="C60DB949ACECD58B" modified="2015-12-09" version="1">MDWRNMPPLNSLRAFATVAESKSLSAAGRELNVTHAAISQQVRALEKHLGLPLVTRAGRGIELTDEGRQLYEGLRKGFETIGETVEAIGASGEARPLNITMTPSFAVSWLMPRINDFRHKHPDIELMLNPSADVTELAPGGTDLAIRFGRGNWPGLEAELFLATNFVVVGANCLIGDRKMDKPEDILEFPWLQEYGTNELALWLEKQGVVPKNKLSVTHLPGYMVLEGLRRGEGISATAKTFIQPDIDAGNLKVLFEEGVYPGTGYHLVTRPGVKRPALKSFISWLRSMMQEQDQNSD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3F8</accession>
    <name>A0A0M7A3F8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Putative periplasmic lipoprotein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_02177</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69598.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671820.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02177"/>
    <dbReference type="EnsemblBacteria" id="CTQ69598">
        <property type="protein sequence ID" value="CTQ69598"/>
        <property type="gene ID" value="LAX5112_02177"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd14659">
        <property type="entry name" value="Imelysin-like_IPPA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1420.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018976">
        <property type="entry name" value="Imelysin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034984">
        <property type="entry name" value="Imelysin-like_IPPA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038352">
        <property type="entry name" value="Imelysin_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09375">
        <property type="entry name" value="Peptidase_M75"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809215" evidence="2">
        <location>
            <begin position="20"/>
            <end position="357"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_M75" evidence="3">
        <location>
            <begin position="35"/>
            <end position="315"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF09375"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ69598.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="357" mass="39073" checksum="252CA6B1394908F3" modified="2015-12-09" version="1">MKRILVSAAAALMAWPALAADLTQPIEKMIAGYIQPEARVFADVTTRLPEAVKEVCQEPADEAKADFKVVFSDAVGQFARIHFLRLGPLIEEDRISRLAFQPDPRGIAQRQIRKLYAVQDESVWTAESLSEKSVALQGLTALQLIAFDKTGAVVLGEEGERRDFTCSYALAISENVASIARDVMLSWFDADGFSKTLLQTGGSNARYQTDTEALEDVFQMLSTALIVVRDQNITPALGSSEEKVRPNRIPFSRSGNGVVFLTSEMNGILDAIRSMDLEPMMPEEHAWLIGSMTFEFENALKTLKKLQPPLRETFEVSGAYGQLSLLVISLNSLQRLVGERVAGALGLAGGFNALDGD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A460</accession>
    <name>A0A0M7A460_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Sulfate transport system permease protein CysW</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">cysW_2</name>
        <name evidence="7" type="ORF">LAX5112_02205</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69669.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671921.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02205"/>
    <dbReference type="EnsemblBacteria" id="CTQ69669">
        <property type="protein sequence ID" value="CTQ69669"/>
        <property type="gene ID" value="LAX5112_02205"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="61"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="99"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="132"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="179"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="233"/>
            <end position="254"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="61"/>
            <end position="249"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ69669.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="263" mass="28658" checksum="999F54F4EF765B7B" modified="2015-12-09" version="1">MKRSFAWWLQCAVTLVIAAFLLVPAIQSILAGVTANYFRGLSSGLTLKWIGQVWELYSSSIFLSIWLAIACLAVTLVIGVPAAYALARNPGRVSRMLEEFISLPLAVPGLALALALLQLYGTLSGFRTSWTFILVGHVLYTLPFMVRSVLAVLMAMDFRSLEESAATLGASAFTRFRTVIIPNAMPGILAGALTVVTLSIGEFNLTWMLHTPYLKTLPVGLADSYASMRLEVASAYTLVFFAMIVPLLMAMQWASARAQRIAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A479</accession>
    <name>A0A0M7A479_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">UDP-glucose 4-epimerase</fullName>
            <ecNumber evidence="3">5.1.3.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">galE_2</name>
        <name evidence="3" type="ORF">LAX5112_01779</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the NAD(P)-dependent epimerase/dehydratase family.</text>
    </comment>
    <dbReference type="EC" id="5.1.3.2" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68543.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671505.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01779"/>
    <dbReference type="EnsemblBacteria" id="CTQ68543">
        <property type="protein sequence ID" value="CTQ68543"/>
        <property type="gene ID" value="LAX5112_01779"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003978">
        <property type="term" value="F:UDP-glucose 4-epimerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001509">
        <property type="entry name" value="Epimerase_deHydtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01370">
        <property type="entry name" value="Epimerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0413">Isomerase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Epimerase" evidence="2">
        <location>
            <begin position="3"/>
            <end position="216"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007637"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ68543.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="297" mass="32112" checksum="CA14E84911579430" modified="2015-12-09" version="1">MDILITGATGQLGRFIASRLRQDGHQISCLGRTPSDIPEDKFVKWDLDDRKITLPAADALIHCALSHVPGKYRNGEGDDPHGFIDRNVEGTQALFQAAKAAGATQCVFLSSRAVYAGASEWGVLTEDSPVDPDSFYGKVKYAGELALEVLSDANFKGTVIRATGVYGCPPGLETHKWTKVLDDFAKGDAVIPRVGTEVHGEDLAIAVALLLEERARSEAVFDVFNASDMLLDLRDLLKIYQETFGLEWHLPIRAPGPVGVMDIAKLVRLGWSPGGKAKLERFIQSLPAPAETEVSAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A482</accession>
    <name>A0A0M7A482_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 5">50S ribosomal protein L5</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 9" type="primary">rplE</name>
        <name evidence="9" type="ORF">LAX5112_01738</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Part of the 50S ribosomal subunit; part of the 5S rRNA/L5/L18/L25 subcomplex. Contacts the 5S rRNA and the P site tRNA. Forms a bridge to the 30S subunit in the 70S ribosome.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 5 6">Belongs to the universal ribosomal protein uL5 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68434.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008190162.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01738"/>
    <dbReference type="EnsemblBacteria" id="CTQ68434">
        <property type="protein sequence ID" value="CTQ68434"/>
        <property type="gene ID" value="LAX5112_01738"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1440.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01333_B">
        <property type="entry name" value="Ribosomal_L5_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002132">
        <property type="entry name" value="Ribosomal_L5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020930">
        <property type="entry name" value="Ribosomal_L5_bac-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031309">
        <property type="entry name" value="Ribosomal_L5_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020929">
        <property type="entry name" value="Ribosomal_L5_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022803">
        <property type="entry name" value="Ribosomal_L5_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031310">
        <property type="entry name" value="Ribosomal_L5_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11994">
        <property type="entry name" value="PTHR11994"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00281">
        <property type="entry name" value="Ribosomal_L5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00673">
        <property type="entry name" value="Ribosomal_L5_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002161">
        <property type="entry name" value="Ribosomal_L5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55282">
        <property type="entry name" value="SSF55282"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00358">
        <property type="entry name" value="RIBOSOMAL_L5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 5 6" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 5 6" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="5" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="5" id="KW-0699">rRNA-binding</keyword>
    <keyword evidence="5" id="KW-0820">tRNA-binding</keyword>
    <feature type="domain" description="Ribosomal_L5" evidence="7">
        <location>
            <begin position="30"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="domain" description="Ribosomal_L5_C" evidence="8">
        <location>
            <begin position="90"/>
            <end position="183"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00029522"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01333"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003930"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00281"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00673"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ68434.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="185" mass="21087" checksum="D2A8348BA22A28DC" modified="2015-12-09" version="1">MAETTNVPRLKTHYDEVVRKQLQEKFQYKNIMQVPQLEKIVLNIGVGEAVGDSKKARTAAEDLAAIAGQKPVITKAKKSIATFKVREGMPLGVKVTLRRQQMFEFLDRMITIALPRVRDFRGLNPKSFDGRGNYAMGIKEHIVFPEIEYDKVDQIWGMDVIVCTTAPNDDEARELLRAFNFPFTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4V2</accession>
    <name>A0A0M7A4V2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">D-malate degradation protein R</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">dmlR_5</name>
        <name evidence="3" type="ORF">LAX5112_02121</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69456.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671780.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02121"/>
    <dbReference type="EnsemblBacteria" id="CTQ69456">
        <property type="protein sequence ID" value="CTQ69456"/>
        <property type="gene ID" value="LAX5112_02121"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ69456.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="304" mass="33831" checksum="24E78FBA5A49FA49" modified="2015-12-09" version="1">MQDLKPIRVFLEVSRLQSFAAASKTLGMTPASVTRVIARLEQDLGHQLLVRTTRKVALTSVGATVAARYQPVVESFDRIQRDLEREMQPHRGRLSINAPMSFGLRMLPSLLESFKLAYPNIDLTVMLTDTLVDVVAEECDLAIRLSEPPRDKSTIWRKICEVPRCAIAAPVFLERAGRPETPDTLTPDMCLSYGSGQEPEAWRFQKGGIKRTILTGPGLHSNNGDFLYAMARSGAGITVLPEFIVADGLRSGEVERVLPDWILPSLWLSLYYPPYEALPPLVATFTDFFEAFLDDRAGFDFSGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4W9</accession>
    <name>A0A0M7A4W9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Bacteriophytochrome cph2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">cph2_10</name>
        <name evidence="6" type="ORF">LAX5112_02371</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70128.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02371"/>
    <dbReference type="EnsemblBacteria" id="CTQ70128">
        <property type="protein sequence ID" value="CTQ70128"/>
        <property type="gene ID" value="LAX5112_02371"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01948">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01949">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00130">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.450">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011622">
        <property type="entry name" value="7TMR_DISM_rcpt_extracell_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001633">
        <property type="entry name" value="EAL_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035919">
        <property type="entry name" value="EAL_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000160">
        <property type="entry name" value="GGDEF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001610">
        <property type="entry name" value="PAC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000014">
        <property type="entry name" value="PAS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000700">
        <property type="entry name" value="PAS-assoc_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035965">
        <property type="entry name" value="PAS-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013655">
        <property type="entry name" value="PAS_fold_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07696">
        <property type="entry name" value="7TMR-DISMED2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00563">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00990">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08447">
        <property type="entry name" value="PAS_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00052">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00267">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00086">
        <property type="entry name" value="PAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141868">
        <property type="entry name" value="SSF141868"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55785">
        <property type="entry name" value="SSF55785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00254">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00229">
        <property type="entry name" value="sensory_box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50883">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50887">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50113">
        <property type="entry name" value="PAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50112">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="19"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="202"/>
            <end position="224"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="236"/>
            <end position="255"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="267"/>
            <end position="285"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="297"/>
            <end position="314"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="321"/>
            <end position="343"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="349"/>
            <end position="370"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="382"/>
            <end position="403"/>
        </location>
    </feature>
    <feature type="domain" description="PAS" evidence="2">
        <location>
            <begin position="415"/>
            <end position="487"/>
        </location>
    </feature>
    <feature type="domain" description="PAC" evidence="3">
        <location>
            <begin position="491"/>
            <end position="543"/>
        </location>
    </feature>
    <feature type="domain" description="GGDEF" evidence="5">
        <location>
            <begin position="576"/>
            <end position="709"/>
        </location>
    </feature>
    <feature type="domain" description="EAL" evidence="4">
        <location>
            <begin position="718"/>
            <end position="973"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50112"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50113"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ70128.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="980" mass="107528" checksum="FF0C014E431622AF" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4Y0</accession>
    <name>A0A0M7A4Y0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">N-ethylmaleimide reductase</fullName>
            <ecNumber evidence="2">1.-.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">nemA</name>
        <name evidence="2" type="ORF">LAX5112_01881</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.-.-.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68773.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671579.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01881"/>
    <dbReference type="EnsemblBacteria" id="CTQ68773">
        <property type="protein sequence ID" value="CTQ68773"/>
        <property type="gene ID" value="LAX5112_01881"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010181">
        <property type="term" value="F:FMN binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001155">
        <property type="entry name" value="OxRdtase_FMN_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045247">
        <property type="entry name" value="Oye-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22893">
        <property type="entry name" value="PTHR22893"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00724">
        <property type="entry name" value="Oxidored_FMN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Oxidored_FMN" evidence="1">
        <location>
            <begin position="5"/>
            <end position="339"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00724"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68773.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="368" mass="39234" checksum="8DF7E93C36DE7EBD" modified="2015-12-09" version="1">MSDTKLFSPAKAGAIDLNNRIVMAPLTRNRARAENDAPYELHAKYYAQRAGAGLIISEASQISPQGKGYAWTPGIYSEAQIEGWKKVTDAVHAKGGKIVIQLWHVGRISHPVLQPGGADPVAPSAISAASKSFDGTSFIETTTPRALETEEIAGIVEDYRKATLNAKAAGFDGVEIHAANGYLIDQFLKDGANQRTDDYGGSIENRTRFLKEVVDAVTGAWSADRVGIRLSPFSNANNITESDPQAVFSHVIKLLNGYGLAYLHLVEGQTGGPREVPEGGDLAALYALFDGATMGNNGYDRDMAIAAVDSGELDLVAIGRPFISNPDLVERLEKNAPLNPLDPDTLYGGGEKGYVDYPSLAESAVAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="33" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5N8</accession>
    <name>A0A0M7A5N8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="10 12">Malate synthase G</fullName>
            <ecNumber evidence="10 12">2.3.3.9</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10 13" type="primary">glcB</name>
        <name evidence="13" type="ORF">LAX5112_02511</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 10 12">
            <text>acetyl-CoA + glyoxylate + H2O = (S)-malate + CoA + H(+)</text>
            <dbReference type="Rhea" id="RHEA:18181"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15589"/>
            <dbReference type="ChEBI" id="CHEBI:36655"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57288"/>
            <dbReference type="EC" id="2.3.3.9"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 10">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="10 12">Carbohydrate metabolism; glyoxylate cycle; (S)-malate from isocitrate: step 2/2.</text>
    </comment>
    <comment type="subunit">
        <text evidence="10">Monomer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="10 12">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="10 12">Belongs to the malate synthase family. GlcB subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.3.3.9" evidence="10 12"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70445.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672147.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02511"/>
    <dbReference type="EnsemblBacteria" id="CTQ70445">
        <property type="protein sequence ID" value="CTQ70445"/>
        <property type="gene ID" value="LAX5112_02511"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00703">
        <property type="reaction ID" value="UER00720"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004474">
        <property type="term" value="F:malate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006097">
        <property type="term" value="P:glyoxylate cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006099">
        <property type="term" value="P:tricarboxylic acid cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1220.12">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.360">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00641">
        <property type="entry name" value="Malate_synth_G"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044856">
        <property type="entry name" value="Malate_synth_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011076">
        <property type="entry name" value="Malate_synth_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001465">
        <property type="entry name" value="Malate_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006253">
        <property type="entry name" value="Malate_synthG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046363">
        <property type="entry name" value="MS_N_TIM-barrel_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42739">
        <property type="entry name" value="PTHR42739"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01274">
        <property type="entry name" value="Malate_synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51645">
        <property type="entry name" value="SSF51645"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01345">
        <property type="entry name" value="malate_syn_G"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="13" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="4 10" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 10 12" id="KW-0329">Glyoxylate bypass</keyword>
    <keyword evidence="8 10" id="KW-0460">Magnesium</keyword>
    <keyword evidence="7 10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9 10" id="KW-0558">Oxidation</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 10 12" id="KW-0808">Transferase</keyword>
    <keyword evidence="5 10 12" id="KW-0816">Tricarboxylic acid cycle</keyword>
    <feature type="region of interest" description="Acetyl-CoA binding" evidence="10">
        <location>
            <begin position="124"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="region of interest" description="Glyoxylate binding" evidence="10">
        <location>
            <begin position="452"/>
            <end position="455"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="10 11">
        <location>
            <position position="335"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="10 11">
        <location>
            <position position="626"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="117"/>
        </location>
        <ligand>
            <name>acetyl-CoA</name>
            <dbReference type="ChEBI" id="CHEBI:57288"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="271"/>
        </location>
        <ligand>
            <name>acetyl-CoA</name>
            <dbReference type="ChEBI" id="CHEBI:57288"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="308"/>
        </location>
        <ligand>
            <name>acetyl-CoA</name>
            <dbReference type="ChEBI" id="CHEBI:57288"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="335"/>
        </location>
        <ligand>
            <name>glyoxylate</name>
            <dbReference type="ChEBI" id="CHEBI:36655"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="427"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="455"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="536"/>
        </location>
        <ligand>
            <name>acetyl-CoA</name>
            <dbReference type="ChEBI" id="CHEBI:57288"/>
        </ligand>
    </feature>
    <feature type="modified residue" description="Cysteine sulfenic acid (-SOH)" evidence="10">
        <location>
            <position position="612"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001699"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022435"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022532"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023097"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00641"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRSR" id="PIRSR601465-50"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU003572"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="CTQ70445.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="720" mass="78306" checksum="30EE16D6A9A5A4A7" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A659</accession>
    <name>A0A0M7A659_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Acidobacterial duplicated orphan permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">LAX5112_02227</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69730.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671858.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02227"/>
    <dbReference type="EnsemblBacteria" id="CTQ69730">
        <property type="protein sequence ID" value="CTQ69730"/>
        <property type="gene ID" value="LAX5112_02227"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025857">
        <property type="entry name" value="MacB_PCD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038766">
        <property type="entry name" value="Membrane_comp_ABC_pdt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30287">
        <property type="entry name" value="PTHR30287"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12704">
        <property type="entry name" value="MacB_PCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="34"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="276"/>
            <end position="300"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="306"/>
            <end position="326"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="333"/>
            <end position="354"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="366"/>
            <end position="388"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="417"/>
            <end position="437"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="443"/>
            <end position="467"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="488"/>
            <end position="512"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="735"/>
            <end position="759"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="780"/>
            <end position="809"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="821"/>
            <end position="843"/>
        </location>
    </feature>
    <feature type="domain" description="MacB_PCD" evidence="7">
        <location>
            <begin position="38"/>
            <end position="207"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF12704"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ69730.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="860" mass="91546" checksum="FE724703BE509D18" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6A1</accession>
    <name>A0A0M7A6A1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Histone deacetylase-like amidohydrolase</fullName>
            <ecNumber evidence="3">3.5.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">hdaH_1</name>
        <name evidence="3" type="ORF">LAX5112_02502</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the histone deacetylase family.</text>
    </comment>
    <dbReference type="EC" id="3.5.1.-" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70419.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008192575.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02502"/>
    <dbReference type="EnsemblBacteria" id="CTQ70419">
        <property type="protein sequence ID" value="CTQ70419"/>
        <property type="gene ID" value="LAX5112_02502"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.800.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000286">
        <property type="entry name" value="His_deacetylse"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023801">
        <property type="entry name" value="His_deacetylse_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037138">
        <property type="entry name" value="His_deacetylse_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023696">
        <property type="entry name" value="Ureohydrolase_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00850">
        <property type="entry name" value="Hist_deacetyl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01270">
        <property type="entry name" value="HDASUPER"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52768">
        <property type="entry name" value="SSF52768"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Hist_deacetyl" evidence="2">
        <location>
            <begin position="25"/>
            <end position="310"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ70419.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="314" mass="34037" checksum="70D378AF1F45D35F" modified="2015-12-09" version="1">METPAVSTLLLHHPTYLDHLTPVGHPERPDRIRAIDRILEHEKFQSVERDLAPIGALEDIARAHPMAYIDQLHRLSPDEGVARVDADTTMSPGTWEAALRGVGGACRAVDEVLTKKVNNAFSASRPPGHHAEKDRAMGFCFFNNAAVAARYAQEKYGIDRVAIIDFDVHHGNGTQDIFWDDPSVMYCSTHQMPLYPGSGDASETGEANTIVNVPLPPGENGAGFKEAFEVILLPRLDGFAPELVIISAGFDAHARDPLGGLNLVEADFAWATRALMDVADKHSDGRVVSVLEGGYDLEGLARSTAAHVMTLMTG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6F1</accession>
    <name>A0A0M7A6F1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Putative bifunctional cbb3-type cytochrome c oxidase subunit II/cytochrome c</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">LAX5112_02516</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>heme c</name>
            <dbReference type="ChEBI" id="CHEBI:61717"/>
        </cofactor>
    </comment>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70459.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672092.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02516"/>
    <dbReference type="EnsemblBacteria" id="CTQ70459">
        <property type="protein sequence ID" value="CTQ70459"/>
        <property type="gene ID" value="LAX5112_02516"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070469">
        <property type="term" value="C:respirasome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.760.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009056">
        <property type="entry name" value="Cyt_c-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036909">
        <property type="entry name" value="Cyt_c-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008168">
        <property type="entry name" value="Cyt_C_IC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00034">
        <property type="entry name" value="Cytochrom_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00605">
        <property type="entry name" value="CYTCHROMECIC"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46626">
        <property type="entry name" value="SSF46626"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51007">
        <property type="entry name" value="CYTC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0249">Electron transport</keyword>
    <keyword evidence="2 7" id="KW-0349">Heme</keyword>
    <keyword evidence="6 7" id="KW-0408">Iron</keyword>
    <keyword evidence="8" id="KW-0472">Membrane</keyword>
    <keyword evidence="4 7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="3" id="KW-0679">Respiratory chain</keyword>
    <keyword evidence="8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="6"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="domain" description="Cytochrome c" evidence="9">
        <location>
            <begin position="41"/>
            <end position="140"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001926"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022660"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00433"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ70459.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="156" mass="16744" checksum="CB121776262B8C2A" modified="2015-12-09" version="1">MGKPLQYLAIAGALIVGLGVAALYVLPRNEYTGLLQPEDADAVAHGKVIYDETCAACHGANLEGEADWQTPKADGLMPAPPHDVSGHTWHHSSQLLFDMTKYGVAEAANLENYQSAMPAYEGVLTDDEIIAVLSFIKASWPEDVRARHDALDAATN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A709</accession>
    <name>A0A0M7A709_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">2-aminoadipate transaminase</fullName>
            <ecNumber evidence="2">2.6.1.39</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">lysN</name>
        <name evidence="2" type="ORF">LAX5112_02422</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.6.1.39" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70232.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672030.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02422"/>
    <dbReference type="EnsemblBacteria" id="CTQ70232">
        <property type="protein sequence ID" value="CTQ70232"/>
        <property type="gene ID" value="LAX5112_02422"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047536">
        <property type="term" value="F:2-aminoadipate transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009058">
        <property type="term" value="P:biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004839">
        <property type="entry name" value="Aminotransferase_I/II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00155">
        <property type="entry name" value="Aminotran_1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Aminotran_1_2" evidence="1">
        <location>
            <begin position="91"/>
            <end position="396"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70232.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="408" mass="43727" checksum="355D96DA67AB75D3" modified="2015-12-09" version="1">MMTWDAVLATRAKRMSASEIRELLKLLDQPDIISFAGGIPDPALFPADAFRTAYADALSGGGAAAGLQYSVSEGSLRLRRWLVGEMAKLGVSCGPENILITSGSQQALDFLGKLFLSANDTALVGWPTYLGALQAFNAYEPNFDRLDPMTNRSAADYRKTAEERGGKVKFAYLSPDFANPTGETLDEAGRQRLLGLADELDCAVIEDGAYQSLRYDGTPVPPVLALDCTRSGGIENTRTLYCGSFSKTLSPGLRLGWVCAAKDVISRLVLLKQAGDLHSSSLNQEAMARVAETVFDAQVDKVRSAYRARRDAMLAALENHMPAGTRWTRPEGGMFVWVELPEGADAAGLLKEAVETAKIAFVPGKAFFADGSGGNTLRLSFSATTPEKITEGISRLGTLIAKTVTPAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A719</accession>
    <name>A0A0M7A719_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Lysine/ornithine decarboxylase</fullName>
            <ecNumber evidence="5">4.1.1.17</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ldc_1</name>
        <name evidence="5" type="ORF">LAX5112_02573</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the Orn/Lys/Arg decarboxylase class-II family.</text>
    </comment>
    <dbReference type="EC" id="4.1.1.17" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70679.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672295.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02573"/>
    <dbReference type="EnsemblBacteria" id="CTQ70679">
        <property type="protein sequence ID" value="CTQ70679"/>
        <property type="gene ID" value="LAX5112_02573"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004586">
        <property type="term" value="F:ornithine decarboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006596">
        <property type="term" value="P:polyamine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.37.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009006">
        <property type="entry name" value="Ala_racemase/Decarboxylase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022643">
        <property type="entry name" value="De-COase2_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022644">
        <property type="entry name" value="De-COase2_N"/>
    </dbReference>
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        <property type="match status" value="1"/>
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        <property type="match status" value="1"/>
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        <property type="entry name" value="Orn_DAP_Arg_deC"/>
        <property type="match status" value="1"/>
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        <property type="entry name" value="ODADCRBXLASE"/>
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        <property type="entry name" value="ORNDCRBXLASE"/>
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        <property type="entry name" value="SSF51419"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0456">Lyase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Orn_Arg_deC_N" evidence="4">
        <location>
            <begin position="29"/>
            <end position="269"/>
        </location>
    </feature>
    <feature type="domain" description="Orn_DAP_Arg_deC" evidence="3">
        <location>
            <begin position="270"/>
            <end position="364"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU003737"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="Pfam" id="PF00278"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF02784"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ70679.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="406" mass="45057" checksum="3B03C59C9AC9D1E2" modified="2015-12-09" version="1">MERYKTAAEVALDLRPDHPIYCFRPSVLRADAQNFKKLFPGKTAYAVKTNGEPFVLKELAAAGYDCFDVASPAEFAAVREASPKAEMLYMHPIKAQSDIRLALEQYGIRVMSLDHEDEVAKILRIVRALDIDPAKITLFVRIATKGHAAYELSKKFGAAPGHAVELLQRIHRIGFKCGLCFHVGSQIEEPETYERALASADWIRSRAGVPIVELDVGGGFPAVYGHDPRRKVPDLPTLEELMGQIRSDIAEWAYDDIPLVAEPGRVVVARSISLIVRVLLKKGRRLYINDGIWASLSDSWTGKITLPARFIPDPARRTRSGKADNIVPFKVCGATCDSVDILSRPFWLPETVDTGDWIEIGHIGAYSLSLRTRFNGFYPDTVIEVDTPFDAGEEPEGFASIETMAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A878</accession>
    <name>A0A0M7A878_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Sodium, potassium, lithium and rubidium/H(+) antiporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">nhaK</name>
        <name evidence="9" type="ORF">LAX5112_02509</name>
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    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
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            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70440.1"/>
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        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
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        <property type="component" value="Unassembled WGS sequence"/>
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        <property type="term" value="C:integral component of membrane"/>
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        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006814">
        <property type="term" value="P:sodium ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="entry name" value="CAP_ED"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="Cation/H_exchanger"/>
    </dbReference>
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        <property type="entry name" value="Cation/H_exchanger_CPA1"/>
    </dbReference>
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        <property type="entry name" value="cNMP-bd-like"/>
    </dbReference>
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        <property type="entry name" value="cNMP-bd_CS"/>
    </dbReference>
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        <property type="entry name" value="cNMP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
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        <property type="entry name" value="PTHR10110"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="cNMP_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00999">
        <property type="entry name" value="Na_H_Exchanger"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="cNMP"/>
        <property type="match status" value="1"/>
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    <dbReference type="SUPFAM" id="SSF51206">
        <property type="entry name" value="SSF51206"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00889">
        <property type="entry name" value="CNMP_BINDING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="CNMP_BINDING_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0406">Ion transport</keyword>
    <keyword evidence="4 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0915">Sodium</keyword>
    <keyword evidence="5" id="KW-0739">Sodium transport</keyword>
    <keyword evidence="1 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="30"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="70"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="99"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="126"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="167"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="197"/>
            <end position="220"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="226"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="251"/>
            <end position="267"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="287"/>
            <end position="303"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="315"/>
            <end position="336"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="356"/>
            <end position="375"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="387"/>
            <end position="404"/>
        </location>
    </feature>
    <feature type="domain" description="Cyclic nucleotide-binding" evidence="8">
        <location>
            <begin position="703"/>
            <end position="800"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="821"/>
            <end position="907"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="853"/>
            <end position="882"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="883"/>
            <end position="897"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023053"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023201"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ70440.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="907" mass="99200" checksum="6CDBB9E388358292" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8C9</accession>
    <name>A0A0M7A8C9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Hemolysin C</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">tlyC_2</name>
        <name evidence="7" type="ORF">LAX5112_02794</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UPF0053 family. Hemolysin C subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71358.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02794"/>
    <dbReference type="EnsemblBacteria" id="CTQ71358">
        <property type="protein sequence ID" value="CTQ71358"/>
        <property type="gene ID" value="LAX5112_02794"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd04590">
        <property type="entry name" value="CBS_pair_CorC_HlyC_assoc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.580.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.465.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000644">
        <property type="entry name" value="CBS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046342">
        <property type="entry name" value="CBS_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036318">
        <property type="entry name" value="FAD-bd_PCMH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016169">
        <property type="entry name" value="FAD-bd_PCMH_sub2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044751">
        <property type="entry name" value="Ion_transp-like_CBS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005170">
        <property type="entry name" value="Transptr-assoc_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00571">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03471">
        <property type="entry name" value="CorC_HlyC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00116">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM01091">
        <property type="entry name" value="CorC_HlyC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54631">
        <property type="entry name" value="SSF54631"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56176">
        <property type="entry name" value="SSF56176"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51371">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0129">CBS domain</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="CBS" evidence="6">
        <location>
            <begin position="97"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="domain" description="CBS" evidence="6">
        <location>
            <begin position="204"/>
            <end position="264"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="356"/>
            <end position="393"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="356"/>
            <end position="386"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006446"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023122"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00703"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51371"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ71358.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="393" mass="43315" checksum="7D0D08AC52D0514A" modified="2015-12-09" version="1">MMNAVEPNSSGSEADSAQHGTAQDGEDPQQTRPQKPAAFFSSLKRLLRLGRDTSNLRENLEDELAREGAGDTAFSPEERMLLGNILRLREKRVDDVMIPRADIEAVDIGTSLSRVMELFRNSGHSRMPVYEDTLDDPRGMVHIKDLMAFIAEQGAGSSVNGSDSLPPSEDTERLTIVAPAPGHNSSDLDLSSVDLSISLRDVNLIRNLLFVPPSMPATDLMAKMQAGRIQMALVIDEYGGTDGLVSLEDLVEEVVGDIEDEHDEDEEAMLADAGDGIWIADPRLPLEDLDEALGTLLSDGEISEDVDTLGGLLYVTVGRVPVRGELVLVDDVPGYEFEVMDADPRRIKRLKIRRRRAEVRSPEVRRRLKRPETDPSETDQDAPENKEQRPIAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8E6</accession>
    <name>A0A0M7A8E6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Dna-J like membrane chaperone protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02588</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70722.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672175.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02588"/>
    <dbReference type="EnsemblBacteria" id="CTQ70722">
        <property type="protein sequence ID" value="CTQ70722"/>
        <property type="gene ID" value="LAX5112_02588"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd06257">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3680.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007791">
        <property type="entry name" value="DjlA_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001623">
        <property type="entry name" value="DnaJ_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036869">
        <property type="entry name" value="J_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029024">
        <property type="entry name" value="TerB-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00226">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05099">
        <property type="entry name" value="TerB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00271">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF158682">
        <property type="entry name" value="SSF158682"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46565">
        <property type="entry name" value="SSF46565"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50076">
        <property type="entry name" value="DNAJ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="J" evidence="1">
        <location>
            <begin position="165"/>
            <end position="229"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70722.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="230" mass="25074" checksum="69D8373126845CF9" modified="2015-12-09" version="1">MSVWSSIGSIVGAIGTGGAQIVDRLVQLVLARPEGVNTVGFTVAMIALSAKMAKADGVVTADEVIAFRELFDVPPNEEKNVARLFNLAQEDVAGFDVYAKKLADLFPYDRKTLLDILDGLFHIAKADGVVHQSEISYLSEVAKVFGLDDREFSKALARHVRKGGDPYEVLGIGAQASDAELKAHYRREVQETHPDRLIARGVPEEFVRIANDRLAALNEAWAQICAERGI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8Y0</accession>
    <name>A0A0M7A8Y0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 13">Tetraacyldisaccharide 4'-kinase</fullName>
            <ecNumber evidence="3 13">2.7.1.130</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="12 13">Lipid A 4'-kinase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="13 15" type="primary">lpxK</name>
        <name evidence="15" type="ORF">LAX5112_02349</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 13">Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).</text>
    </comment>
    <comment type="pathway">
        <text evidence="2 13">Glycolipid biosynthesis; lipid IV(A) biosynthesis; lipid IV(A) from (3R)-3-hydroxytetradecanoyl-[acyl-carrier-protein] and UDP-N-acetyl-alpha-D-glucosamine: step 6/6.</text>
    </comment>
    <comment type="similarity">
        <text evidence="13">Belongs to the LpxK family.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.130" evidence="3 13"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70084.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671971.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02349"/>
    <dbReference type="EnsemblBacteria" id="CTQ70084">
        <property type="protein sequence ID" value="CTQ70084"/>
        <property type="gene ID" value="LAX5112_02349"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00359">
        <property type="reaction ID" value="UER00482"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009029">
        <property type="term" value="F:tetraacyldisaccharide 4'-kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009245">
        <property type="term" value="P:lipid A biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00409">
        <property type="entry name" value="LpxK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003758">
        <property type="entry name" value="LpxK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42724">
        <property type="entry name" value="PTHR42724"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02606">
        <property type="entry name" value="LpxK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00682">
        <property type="entry name" value="lpxK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10 13" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="9 13 15" id="KW-0418">Kinase</keyword>
    <keyword evidence="6 13" id="KW-0441">Lipid A biosynthesis</keyword>
    <keyword evidence="5 13" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="11 13" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="14" id="KW-0472">Membrane</keyword>
    <keyword evidence="8 13" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 13 15" id="KW-0808">Transferase</keyword>
    <keyword evidence="14" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="14" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="15"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <begin position="54"/>
            <end position="61"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004870"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012071"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00016436"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022556"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00029757"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00409"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="CTQ70084.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="340" mass="36664" checksum="B25E01386C6D6237" modified="2015-12-09" version="1">MGKAPDFWWTPNRSAAAFALAAVGWIYGLIAGRRMVQHSKARSALPVICIGNFVTGGTGKTPFALRLSDRLAKEGHTPGFLLRGYGGRLKGPVLVDPAQHSAADVGDEALLLAQAGPTVISADRPAGAELLEKQQVDMILMDDGFQNPSLHKDLSFVLVDCATGFGNGLCFPAGPLRAPAEKQIVKAGCLVLVGEGERAADAVHLAGRRGLPILHAHIVPEENDALSGQNLLAFAGIGRPQKFFKTLTDLGHKVAKSREFADHHDFSEADARELLTVSDREGLQLVTTAKDMARITTQRGEIFHWLAAKAEILDVQMEIPEEDRLVSLIKDCLRNRAFKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A903</accession>
    <name>A0A0M7A903_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Putative 3-phenylpropionic acid transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">hcaT</name>
        <name evidence="7" type="ORF">LAX5112_02717</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71101.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672271.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02717"/>
    <dbReference type="EnsemblBacteria" id="CTQ71101">
        <property type="protein sequence ID" value="CTQ71101"/>
        <property type="gene ID" value="LAX5112_02717"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026032">
        <property type="entry name" value="HcaT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024989">
        <property type="entry name" value="MFS_assoc_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12832">
        <property type="entry name" value="MFS_1_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004925">
        <property type="entry name" value="HcaT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="39"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="74"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="98"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="137"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="160"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="201"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="243"/>
            <end position="263"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="270"/>
            <end position="289"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="295"/>
            <end position="320"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="332"/>
            <end position="352"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="358"/>
            <end position="381"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="6">
        <location>
            <begin position="1"/>
            <end position="382"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ71101.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="391" mass="40993" checksum="3C3E0DBF15FA2219" modified="2015-12-09" version="1">MLNLTSALSARVSALFGVHFFGYGLFLPFFPVILEFEGFSAADIGFVLGAGTVARIAASPLLTNLADRTGQRRWSIFVYSLLGTVFIALFALGNGLYVLGAGVIGYMVFKAPVLPLSDAYALDAARNTGADYARMRLWGSAGFVAANLAGGFLATGDTVWVMLFLIGLASLLTGGVVLSLPRQSGAGASEGLREDVGEAPFKAVWFWPVLILLGLFQATHAAFYGFGTLYWQAAGIADETIGILWAVGVIAEIALFTVAGKIALRFDPPVFLIVAGVAAIARWGLFPFADTLVSMVAIQLLHALTFGAAHLGAIAILAKVVPSKWAGTGQGLLATSIGLQMAIGLSVCGALYEMDPDLPFYLMAAVSAAGTLVMIALTPMVRQRMASSPVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A909</accession>
    <name>A0A0M7A909_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">L-2-hydroxyglutarate oxidase LhgO</fullName>
            <ecNumber evidence="2">1.1.3.15</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">lhgO</name>
        <name evidence="2" type="ORF">LAX5112_02641</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.1.3.15" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70886.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672214.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02641"/>
    <dbReference type="EnsemblBacteria" id="CTQ70886">
        <property type="protein sequence ID" value="CTQ70886"/>
        <property type="gene ID" value="LAX5112_02641"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003973">
        <property type="term" value="F:(S)-2-hydroxy-acid oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006076">
        <property type="entry name" value="FAD-dep_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01266">
        <property type="entry name" value="DAO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DAO" evidence="1">
        <location>
            <begin position="6"/>
            <end position="361"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01266"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70886.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="365" mass="38655" checksum="38A3638BF2BC8B54" modified="2015-12-09" version="1">MYDIETIVIGAGAVGLACARALALSGREVMVLEQHDLIGSETSARNSEVIHAGIYYPQGSLKAQLCVQGKKQLYAFCQENGVGHEQIGKLIVATNDQQLEELDTIKAKAAANGVTDLEFVSRDALRRKEPALNAAGALWSPSTGILDSHGFMLALQGGLEAHDGQVVLNTKVDHIEPLQAGGFGVHVSTEDGEAYAITCKELILSAGHMAPALAAGLDGTHPPKAFLAKGSYFKLQGRAPFSKLIYPVPEPGGLGVHLTLDLQHQARFGPDVEWVEDFHYPVDAARGDKFYAAIRSYWPDLADGALVPDYSGIRPKIVGPGEPAADFRIDGPAAHGQAGLVALYGIESPGLTSALAIADHVLNKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9F0</accession>
    <name>A0A0M7A9F0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">VWFA-related Acidobacterial domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02754</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71247.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672314.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02754"/>
    <dbReference type="EnsemblBacteria" id="CTQ71247">
        <property type="protein sequence ID" value="CTQ71247"/>
        <property type="gene ID" value="LAX5112_02754"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.410">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002035">
        <property type="entry name" value="VWF_A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036465">
        <property type="entry name" value="vWFA_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00092">
        <property type="entry name" value="VWA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00327">
        <property type="entry name" value="VWA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53300">
        <property type="entry name" value="SSF53300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50234">
        <property type="entry name" value="VWFA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="298"/>
            <end position="317"/>
        </location>
    </feature>
    <feature type="domain" description="VWFA" evidence="2">
        <location>
            <begin position="95"/>
            <end position="279"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50234"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ71247.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="327" mass="35333" checksum="80232EB52C3E2F44" modified="2015-12-09" version="1">MIEFAHPYAFFLLPLPLAVYVLVPPHQERVSALRFPFFRRLADAAGQAPKAGSVIFKRTTLQNLAALSIWGLLITALAAPERVGEPIIQEKAARDVMLAIDISGSMDQVDFVSQDGERTQRLDAVKRVVGDFISDRNGDRIALIVFGAKAFVQAPFTEDLASVRALLEQTEVGMAGPHTVLGDAIGLSIKTFQASQIEDRLLILLSDGADTGSRMTPVNAAAIAAKEGIEIISIGVGDPEGTGDQRLDERTLKSISNAAGGTYYFAGDENGLAEIYARIDAQKPREVETRSFRPREPLSHLLLALAALIGIGTLALLHTRKPRRRAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9G4</accession>
    <name>A0A0M7A9G4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Inner membrane protein YedI</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yedI</name>
        <name evidence="2" type="ORF">LAX5112_02847</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71509.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672430.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ71509">
        <property type="protein sequence ID" value="CTQ71509"/>
        <property type="gene ID" value="LAX5112_02847"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008526">
        <property type="entry name" value="YedI"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30503">
        <property type="entry name" value="PTHR30503"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05661">
        <property type="entry name" value="DUF808"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF016660">
        <property type="entry name" value="YedI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="75"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="174"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="229"/>
            <end position="250"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="290"/>
            <end position="308"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71509.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="325" mass="34246" checksum="D44974C3517BF89D" modified="2015-12-09" version="1">MSGLLALLDDVAAIAKVAAASVDDVIGQAAKAGSKAAGAVIDDAAVTPKYVAGFSPARELPIVWRIAKGSLKNKLIFLLPVGLLLNTFLPGVITPLLMLGGAYLCFEGAEKVYHLFVPGHHDADQPKDLVQDPTHLEEQKVSGAIKTDFILSAEIMTIALSEIPDSNIWMEASTLAVVAIGITVMVYGSVALIVKADDFGLHLSQEGRFGVTRAIGIGIVKAMPGVMKFLMTVGTAAMLWVGGSIVIHGLKELGVKGLYNTIHDIAHGFAHTIGAAEGFLGWFATATMDGIFGLILGLILIPIVTKVIEPVWHMVKGKKEAASRH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9J0</accession>
    <name>A0A0M7A9J0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Lysine-arginine-ornithine-binding periplasmic protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">argT</name>
        <name evidence="3" type="ORF">LAX5112_02922</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71768.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672441.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02922"/>
    <dbReference type="EnsemblBacteria" id="CTQ71768">
        <property type="protein sequence ID" value="CTQ71768"/>
        <property type="gene ID" value="LAX5112_02922"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00062">
        <property type="entry name" value="PBPb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="domain" description="PBPb" evidence="2">
        <location>
            <begin position="36"/>
            <end position="261"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00062"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ71768.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="265" mass="29247" checksum="2F86AECB5FF071FA" modified="2015-12-09" version="1">MVATSDLARADQPDIIVPNFWDHKAVFDRPNNIPDTIQFLATDNFPPFVFRDPQGRLTGFNIDLSRALCQELAISCALKIKDFEVLITALDEEEGDAIISGLSRYSPQARGLTFTDDYMKLPARVIVSDSADTDFGDSPKPGQTVAVQAGTRYEAFARKFWPGADILGFSSTAEAREAVKDGTADAHFGDGLSLSFWLRSPAAESCCRFAGGPWLEPGYFGEGMAIATRSGDTERAAALNYALRQLHQKGVYQELYLRYFPLSFY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9K9</accession>
    <name>A0A0M7A9K9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02653</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70920.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672224.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70920">
        <property type="protein sequence ID" value="CTQ70920"/>
        <property type="gene ID" value="LAX5112_02653"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ70920.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="368" mass="40146" checksum="9D21600E9E17F873" modified="2015-12-09" version="1">MALAMDWPQAQVGEGSANSATILPFEPDDLAQQNPPQSLTRYQYFFVPSHQKDEDDAECVTKPGAFLRLGSYSDIEEESAQSDNGVSAYYPSRHIASETGDRVYKHAAGPRAAQSCGITMACDGRVLIKSDEKFFIETTDLVDIHCGKEIQITADTGPITAETGDQFSIAANKKVSIRSGAIPGEAYVTSEENTSGDTGIEIIANEGNSNAFLEANDIVTHAHGAKTTHVDGTQTNVVRSDTLNDTWGNARSIFRGSNMSLYFAGGLSYRASASLNVSTSIDLNVLMMDFKFALSKFEMVKWKIDMKEVVFKTASVSTQLDYLMLERQRLSVENSELKCETEDLSVKTKKIASELANLTTSISTHVQL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAL7</accession>
    <name>A0A0M7AAL7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Demethylspheroidene O-methyltransferase</fullName>
            <ecNumber evidence="5">2.1.1.210</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">crtF_1</name>
        <name evidence="5" type="ORF">LAX5112_02969</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.210" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71909.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672475.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02969"/>
    <dbReference type="EnsemblBacteria" id="CTQ71909">
        <property type="protein sequence ID" value="CTQ71909"/>
        <property type="gene ID" value="LAX5112_02969"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043803">
        <property type="term" value="F:hydroxyneurosporene-O-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008171">
        <property type="term" value="F:O-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031725">
        <property type="entry name" value="ASMT_dimerisation"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016461">
        <property type="entry name" value="COMT-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001077">
        <property type="entry name" value="O_MeTrfase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16864">
        <property type="entry name" value="Dimerisation2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00891">
        <property type="entry name" value="Methyltransf_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005739">
        <property type="entry name" value="O-mtase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51683">
        <property type="entry name" value="SAM_OMT_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 5" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="2 5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Dimerisation2" evidence="4">
        <location>
            <begin position="45"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="domain" description="Methyltransf_2" evidence="3">
        <location>
            <begin position="175"/>
            <end position="353"/>
        </location>
    </feature>
    <feature type="region of interest" description="S-adenosyl-L-methionine binding" evidence="2">
        <location>
            <begin position="260"/>
            <end position="262"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="234"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="278"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01020"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00891"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF16864"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ71909.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="373" mass="40924" checksum="6AE03FAFFD645935" modified="2015-12-09" version="1">MTSLNALRVRYRLWRNRLIGSATFRSKIARFPGTRWIAQKKSNDLFKLINGFVFSQVLSSCVSLGVFEQLKNTVASTEALAKGCGLEPGRMQLLLEQAERLQLVKKVERDRWVLDDAGAVVAADPGLQAMILHHALFYRDLADPTALLQAPAPDTELKKYWAYAHAQDPADIGTDITQPYSELMRSGQNMLADCILAAHDFSQYSAVQDVGGGEGAFLAAIGKACPDTRLHLFDLPSVTDLAQKHLAENRLTNRTEVHGGDFSRDLIPDKADCVTLVRILCDHDDARVEQILANLHRSLKPGTKVMIAEAMAGNSEGAQLAAVYFSLYFLAMGSGRCRSDADIKDLLLAAGFKSAHTKTTPNPLLATLVFAQR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AB81</accession>
    <name>A0A0M7AB81_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="8 9">50S ribosomal protein L31</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9 10" type="primary">rpmE</name>
        <name evidence="10" type="ORF">LAX5112_03162</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 9">Binds the 23S rRNA.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3 9">Part of the 50S ribosomal subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72385.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008196026.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03162"/>
    <dbReference type="EnsemblBacteria" id="CTQ72385">
        <property type="protein sequence ID" value="CTQ72385"/>
        <property type="gene ID" value="LAX5112_03162"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.830.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00501">
        <property type="entry name" value="Ribosomal_L31_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034704">
        <property type="entry name" value="L28p-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002150">
        <property type="entry name" value="Ribosomal_L31"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027491">
        <property type="entry name" value="Ribosomal_L31_A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042105">
        <property type="entry name" value="Ribosomal_L31_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33280">
        <property type="entry name" value="PTHR33280"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01197">
        <property type="entry name" value="Ribosomal_L31"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01249">
        <property type="entry name" value="RIBOSOMALL31"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF143800">
        <property type="entry name" value="SSF143800"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00105">
        <property type="entry name" value="L31"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01143">
        <property type="entry name" value="RIBOSOMAL_L31"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 9" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="6 9" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="5 9" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="4 9" id="KW-0699">rRNA-binding</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003795"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009296"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011838"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00029551"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ72385.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="74" mass="8204" checksum="ECD3F47D244B557F" modified="2015-12-09" version="1">MKADIHPDYHTIKVVMTDGTEFTTRSTYGAEGDTLQLDIDPTSHPAWTGGDRQLMDRGGRVSRFKNKFAGFLGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AB97</accession>
    <name>A0A0M7AB97_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Creatinine amidohydrolase</fullName>
            <ecNumber evidence="5">3.5.2.10</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">crnA_2</name>
        <name evidence="5" type="ORF">LAX5112_03070</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="4">Belongs to the creatininase superfamily.</text>
    </comment>
    <dbReference type="EC" id="3.5.2.10" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72149.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672561.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03070"/>
    <dbReference type="EnsemblBacteria" id="CTQ72149">
        <property type="protein sequence ID" value="CTQ72149"/>
        <property type="gene ID" value="LAX5112_03070"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047789">
        <property type="term" value="F:creatininase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10310">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024087">
        <property type="entry name" value="Creatininase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003785">
        <property type="entry name" value="Creatininase/forma_Hydrolase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35005">
        <property type="entry name" value="PTHR35005"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02633">
        <property type="entry name" value="Creatininase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF102215">
        <property type="entry name" value="SSF102215"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00024029"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ72149.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="265" mass="29940" checksum="7BFDEDEB6E7DA30F" modified="2015-12-09" version="1">MLPKPFWQDMTTEDFKSAGREDWIAVLPVAAVEQHGPHLPLSTDTTLAEGQIQRVIELIPKHLPVTFLPVQTIGKSDEHIDYPGTLTLSWDTITKCWIEIGESVARAGIRKLVIINSHGGNVPVIDIVSRELRIRHDMFVLGTNWLRFGQPEGLFPDDEFTYGIHGGDIETSLMLALRPDLVRVELSQDFSSEQQRFLKEFKYLRGHGKAQFGWKAQDLNPHGTQGNASAATVEKGRQSLNHAAQAFIELLEDVQSYNLHRLMRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACR8</accession>
    <name>A0A0M7ACR8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">TRAP-type mannitol/chloroaromatic compound transport system, small permease component</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">LAX5112_03097</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72206.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672578.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03097"/>
    <dbReference type="EnsemblBacteria" id="CTQ72206">
        <property type="protein sequence ID" value="CTQ72206"/>
        <property type="gene ID" value="LAX5112_03097"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007387">
        <property type="entry name" value="TRAP_DctQ"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04290">
        <property type="entry name" value="DctQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="30"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="71"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="112"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="160"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="184"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="215"/>
            <end position="231"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="252"/>
            <end position="274"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="301"/>
            <end position="323"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ72206.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="344" mass="37512" checksum="EC45B8F3CEBC4E8C" modified="2015-12-09" version="1">MTALDSVQDGSPAMNTGTGPTPESARLFRLFGWGVLAVMAAYLLNNYLTYWQDLPGIAPIYGGAANGSLSIVWSWLQLAVYAGFLAAVFVYVMRSTTPLRVDSRRISNINTFIIRAAFFAVLIVGLMDSAISFLRIEELLPAIVGQDLADELGKSRFRGAYVHMPLIALSIVIAAFTRTLGFTWLALLVVVAELAIVIGRFVFSYEQAFLADLVRFWYAALFLFASAYTLLEEGHVRVDVFYAGMAPKTKGYVNAIGSVVLGMSLCTTILVLGMGGKQNIINSPILAYEVTQAGFGLYVKYLMAGFLGVFATSMMIQFVAYFLDAIADIRGEPGGRDHENHPVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACS9</accession>
    <name>A0A0M7ACS9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Putative acyltransferase</fullName>
            <ecNumber evidence="7">2.3.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">fadA_3</name>
        <name evidence="7" type="ORF">LAX5112_03009</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the thiolase-like superfamily. Thiolase family.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.-" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72020.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008189118.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03009"/>
    <dbReference type="EnsemblBacteria" id="CTQ72020">
        <property type="protein sequence ID" value="CTQ72020"/>
        <property type="gene ID" value="LAX5112_03009"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016747">
        <property type="term" value="F:acyltransferase activity, transferring groups other than amino-acyl groups"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00751">
        <property type="entry name" value="thiolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.47.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002155">
        <property type="entry name" value="Thiolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016039">
        <property type="entry name" value="Thiolase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020615">
        <property type="entry name" value="Thiolase_acyl_enz_int_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020610">
        <property type="entry name" value="Thiolase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020617">
        <property type="entry name" value="Thiolase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020613">
        <property type="entry name" value="Thiolase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020616">
        <property type="entry name" value="Thiolase_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02803">
        <property type="entry name" value="Thiolase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00108">
        <property type="entry name" value="Thiolase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000429">
        <property type="entry name" value="Ac-CoA_Ac_transf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53901">
        <property type="entry name" value="SSF53901"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01930">
        <property type="entry name" value="AcCoA-C-Actrans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00098">
        <property type="entry name" value="THIOLASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00737">
        <property type="entry name" value="THIOLASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00099">
        <property type="entry name" value="THIOLASE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4 7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Thiolase_N" evidence="5">
        <location>
            <begin position="6"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="domain" description="Thiolase_C" evidence="6">
        <location>
            <begin position="280"/>
            <end position="401"/>
        </location>
    </feature>
    <feature type="active site" description="Acyl-thioester intermediate" evidence="3">
        <location>
            <position position="91"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="3">
        <location>
            <position position="358"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="3">
        <location>
            <position position="388"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR000429-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003557"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00108"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF02803"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ72020.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="402" mass="42300" checksum="7772857E3C214533" modified="2015-12-09" version="1">MPEAYIYDHVRTPRGRGKKDGALHEVPAVRLAATALEAIRDRNGIDTKKVDDVVLGCVDPVGEAGGDIARAAVFAADYDTSVPGMQINRFCASGLDAVNMASAQVMSGQHKLVIAGGVESMSRVGLGASGGAWPIEPQVAIPSYFMPQGVSADLIATKYGFSRDDCDAYAVESQKRAGKSWEDGKFDRSVVPVKDINGITILAKDEHMRPETDMQSLASLNPSFEMMGAMGGFNAVGIQAHPEVENVKHVHHAGNSSGIVDGAAAVLIGSSTAGRSIGMKPRARIKAFANIGSEPALMLTGPVDVTEKLLKNAKMEMKDIDLIEINEAFASVVLRYQQAFDLDSATVNVNGGAIALGHPLGATGAMILGTVLDELERRDLNTALVTLCIGAGMGTATIIERV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADM2</accession>
    <name>A0A0M7ADM2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Putative aliphatic sulfonates transport permease protein SsuC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ssuC_5</name>
        <name evidence="7" type="ORF">LAX5112_03209</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72516.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451016.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03209"/>
    <dbReference type="EnsemblBacteria" id="CTQ72516">
        <property type="protein sequence ID" value="CTQ72516"/>
        <property type="gene ID" value="LAX5112_03209"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="64"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="185"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="217"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="52"/>
            <end position="236"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ72516.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="250" mass="27500" checksum="2D5AD43728194B02" modified="2015-12-09" version="1">MRVLGFLLKRCAGVAVAVLIWAALVHFFEIPPYMLPGPERVFVAFQNQGLFLLHHASITFSETLLGFVFGVAAGCLLAILIWVFPVAKRAIMPTILVTQALPVFAIAPILVLWLGFGLASKIVMAVLVIFFAVTSTFYDGLRRLDPGLSDLSRLYRVSRLKELWVFRLPSAMPALASGLRIAAVFAPIGAIVGEWVGAKGGLAFIMLQSNARMQTDVMFAALILLALMVLLLRFAVDHFTRFLVPWQVED</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADT0</accession>
    <name>A0A0M7ADT0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Integral membrane protein, PqiA family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03231</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72576.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451008.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03231"/>
    <dbReference type="EnsemblBacteria" id="CTQ72576">
        <property type="protein sequence ID" value="CTQ72576"/>
        <property type="gene ID" value="LAX5112_03231"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007498">
        <property type="entry name" value="PqiA-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04403">
        <property type="entry name" value="PqiA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="53"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="124"/>
            <end position="141"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72576.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="147" mass="15638" checksum="A4275B5FDB755F77" modified="2015-12-09" version="1">MRLMIALLLPIATFSFTLGITLPLMRLEKLYFLEERPSLLEVIHGLWLEGDGALAAIIAMFSVVFPAAKIIVVHVAVITGARLRSLALLSTLSKWSMLDVMLVALVLFAAKTSGLAAAAILPGLWFYASATLATALAAALCRRATGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADW9</accession>
    <name>A0A0M7ADW9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Bacteriochlorophyll/chlorophyll a synthase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">LAX5112_02941</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71824.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02941"/>
    <dbReference type="EnsemblBacteria" id="CTQ71824">
        <property type="protein sequence ID" value="CTQ71824"/>
        <property type="gene ID" value="LAX5112_02941"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016765">
        <property type="term" value="F:transferase activity, transferring alkyl or aryl (other than methyl) groups"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015995">
        <property type="term" value="P:chlorophyll biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd13958">
        <property type="entry name" value="PT_UbiA_chlorophyll"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.357.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006372">
        <property type="entry name" value="Chl_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000537">
        <property type="entry name" value="UbiA_prenyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044878">
        <property type="entry name" value="UbiA_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01040">
        <property type="entry name" value="UbiA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01476">
        <property type="entry name" value="chlor_syn_BchG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6" id="KW-0149">Chlorophyll biosynthesis</keyword>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="20"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="52"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="102"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="147"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="178"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="221"/>
            <end position="243"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="249"/>
            <end position="269"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="276"/>
            <end position="298"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ71824.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="306" mass="32894" checksum="8FD1CBF9C031BDD5" modified="2015-12-09" version="1">MFGMELTRQTPQANWPMPGAIVALLKPITWFPPMWAYACGAISTGHGMDGRLGFIFLGVLLAGPLLCGTSQAVNDWFDRHVDAINEPDRVIPSGRMPGQWGLYISIIMSALSLVVAGLMGTFIFAAALLGLAFAWAYSAPPFRFKQNGWLGNGVVGFSYETLPWLTAATAMTGLVPEAPIWIVALLYGLGAHGILTLNDFKAIAGDKEMGIRTLPVLHGERSAALIACAVMTVAQAGVVLTLWMLGLPVYALAILFVLLLQMVCMVRFARNPVRFAVWYSAIGVGLYVTGMMITAFGLRTLVPAIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AE00</accession>
    <name>A0A0M7AE00_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Putative HTH-type transcriptional regulator YdfH</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ydfH_5</name>
        <name evidence="5" type="ORF">LAX5112_03333</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72851.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008192360.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03333"/>
    <dbReference type="EnsemblBacteria" id="CTQ72851">
        <property type="protein sequence ID" value="CTQ72851"/>
        <property type="gene ID" value="LAX5112_03333"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07377">
        <property type="entry name" value="WHTH_GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.530">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011711">
        <property type="entry name" value="GntR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008920">
        <property type="entry name" value="TF_FadR/GntR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000524">
        <property type="entry name" value="Tscrpt_reg_HTH_GntR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07729">
        <property type="entry name" value="FCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00392">
        <property type="entry name" value="GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00895">
        <property type="entry name" value="FCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00345">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48008">
        <property type="entry name" value="SSF48008"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50949">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH gntR-type" evidence="4">
        <location>
            <begin position="25"/>
            <end position="92"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ72851.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="241" mass="27333" checksum="50B7DDA85D948D3D" modified="2015-12-09" version="1">MGADLVFDVGATDPQAAGFQGERRRRKADTVYDNMKRQILLGELTPASPITEQSLAQSYSCSQSTIREALLTLQEDGLVIRRGYQGTFVTQTTNKEAIILFRLRLNIETAAVDRITPDITEDQLDTLRQLAARYDDIRAKRDKIGISEADIAFHMTMLRFADMPVLEPVLLRTLLHLHRFIITRHTSNLIWIDKIKASHHELIEAIATKDPDHARKMAIQHATTNTIEVTDEVRTEVFAKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AE90</accession>
    <name>A0A0M7AE90_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative thiol oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03375</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72937.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672783.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03375"/>
    <dbReference type="EnsemblBacteria" id="CTQ72937">
        <property type="protein sequence ID" value="CTQ72937"/>
        <property type="gene ID" value="LAX5112_03375"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.760.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036909">
        <property type="entry name" value="Cyt_c-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010538">
        <property type="entry name" value="DHOR"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06537">
        <property type="entry name" value="DHOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46626">
        <property type="entry name" value="SSF46626"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809382" evidence="1">
        <location>
            <begin position="27"/>
            <end position="542"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72937.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="542" mass="57881" checksum="CA6C32772132C1EA" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEE2</accession>
    <name>A0A0M7AEE2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Cytokinin riboside 5'-monophosphate phosphoribohydrolase</fullName>
            <ecNumber evidence="2">3.2.2.n1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yvdD</name>
        <name evidence="3" type="ORF">LAX5112_03400</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>AMP + H2O = adenine + D-ribose 5-phosphate</text>
            <dbReference type="Rhea" id="RHEA:20129"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16708"/>
            <dbReference type="ChEBI" id="CHEBI:78346"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="3.2.2.4"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the LOG family.</text>
    </comment>
    <dbReference type="EC" id="3.2.2.n1" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ73001.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672803.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03400"/>
    <dbReference type="EnsemblBacteria" id="CTQ73001">
        <property type="protein sequence ID" value="CTQ73001"/>
        <property type="gene ID" value="LAX5112_03400"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008714">
        <property type="term" value="F:AMP nucleosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009691">
        <property type="term" value="P:cytokinin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005269">
        <property type="entry name" value="LOG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031100">
        <property type="entry name" value="LOG_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03641">
        <property type="entry name" value="Lysine_decarbox"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00730">
        <property type="entry name" value="TIGR00730"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0203">Cytokinin biosynthesis</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU363015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ73001.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="193" mass="21166" checksum="ECE47EF8824EA3D7" modified="2015-12-09" version="1">MKSICVFCGSSYGALEDYNDAAKATGKVIAETGMRLVYGGARVGLMGSVADAALEAGGEVIGVLPHSLKEKEIEHQGLTELHLVKSMHERKAMMADLSDGFIALPGGVGTLEEIFEVWTWGQLGYHQKPCGFLNINGYYDHLIAFLDHQTQEGFTKREMRNMAQIAGAPDDLIALFERYSPPSTPKWIKKDET</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AF94</accession>
    <name>A0A0M7AF94_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Pseudouridine synthase</fullName>
            <ecNumber evidence="4">5.4.99.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">rsuA</name>
        <name evidence="7" type="ORF">LAX5112_03347</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>a uridine in RNA = a pseudouridine in RNA</text>
            <dbReference type="Rhea" id="RHEA:48348"/>
            <dbReference type="Rhea" id="RHEA-COMP:12068"/>
            <dbReference type="Rhea" id="RHEA-COMP:12069"/>
            <dbReference type="ChEBI" id="CHEBI:65314"/>
            <dbReference type="ChEBI" id="CHEBI:65315"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2 4">Belongs to the pseudouridine synthase RsuA family.</text>
    </comment>
    <dbReference type="EC" id="5.4.99.-" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72880.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672761.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03347"/>
    <dbReference type="EnsemblBacteria" id="CTQ72880">
        <property type="protein sequence ID" value="CTQ72880"/>
        <property type="gene ID" value="LAX5112_03347"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0120159">
        <property type="term" value="F:rRNA pseudouridine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000455">
        <property type="term" value="P:enzyme-directed rRNA pseudouridine synthesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="CDD" id="cd00165">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.290.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1560">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.580">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042092">
        <property type="entry name" value="PsdUridine_s_RsuA/RluB/E/F_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020103">
        <property type="entry name" value="PsdUridine_synth_cat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006145">
        <property type="entry name" value="PsdUridine_synth_RsuA/RluA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000748">
        <property type="entry name" value="PsdUridine_synth_RsuA/RluB/E/F"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018496">
        <property type="entry name" value="PsdUridine_synth_RsuA/RluB_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002942">
        <property type="entry name" value="S4_RNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036986">
        <property type="entry name" value="S4_RNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020094">
        <property type="entry name" value="TruA/RsuA/RluB/E/F_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00849">
        <property type="entry name" value="PseudoU_synth_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01479">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55120">
        <property type="entry name" value="SSF55120"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00093">
        <property type="entry name" value="TIGR00093"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01149">
        <property type="entry name" value="PSI_RSU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 7" id="KW-0413">Isomerase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="S4" evidence="6">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="domain" description="PseudoU_synth_2" evidence="5">
        <location>
            <begin position="60"/>
            <end position="193"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008348"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF01479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ72880.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="232" mass="25862" checksum="FFDB45ADCCB8C50B" modified="2015-12-09" version="1">MRLVKLLANLGYGSRKEMQQAIRHGWVTDRDGNPLKPDAKTAHEDILFDDETLDPAHGVVILMNKPLGYVCSTKDQGRLVYDLLPGRFRMRKPVLSTIGRLDKETSGALLFTDDGTFLHQVISPKSNVPKVYEVTLDRPMNGSEAALFASGELMLENEQKPLKPAELEVIDETQARLTLHEGRYHQVRRMFAATGNHVTGLARSRIGALTLAGVNDGQWKILTEDDKALIFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AG21</accession>
    <name>A0A0M7AG21_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Flagellar FliJ protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">LAX5112_03230</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Peripheral membrane protein</topology>
            <orientation evidence="2">Cytoplasmic side</orientation>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
            <orientation evidence="1">Cytoplasmic side</orientation>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the FliJ family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72574.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008193062.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03230"/>
    <dbReference type="EnsemblBacteria" id="CTQ72574">
        <property type="protein sequence ID" value="CTQ72574"/>
        <property type="gene ID" value="LAX5112_03230"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009288">
        <property type="term" value="C:bacterial-type flagellum"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044781">
        <property type="term" value="P:bacterial-type flagellum organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071973">
        <property type="term" value="P:bacterial-type flagellum-dependent cell motility"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006935">
        <property type="term" value="P:chemotaxis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015031">
        <property type="term" value="P:protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012823">
        <property type="entry name" value="Flagell_FliJ"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02050">
        <property type="entry name" value="FliJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02473">
        <property type="entry name" value="flagell_FliJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1005">Bacterial flagellum biogenesis</keyword>
    <keyword evidence="6" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="12" id="KW-0966">Cell projection</keyword>
    <keyword evidence="7" id="KW-0145">Chemotaxis</keyword>
    <keyword evidence="12" id="KW-0969">Cilium</keyword>
    <keyword evidence="12" id="KW-0282">Flagellum</keyword>
    <keyword evidence="10" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-0653">Protein transport</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="107"/>
            <end position="136"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004287"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004413"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00020392"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022500"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022795"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ72574.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="136" mass="16115" checksum="D9FB74263562F9A3" modified="2015-12-09" version="1">MKTRDSLIRLKRFQVDEKRRQLAQIESMISEFNRMADELDDQIRTEQERTGITDVSHFAYPTFAKAAADRRDNLRNSAHELDDQLQRAQDELSEAIEDLKKFEQLEERDQQRERTAQEAAEQEQLDEVAARGRSRY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGP5</accession>
    <name>A0A0M7AGP5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Glycine cleavage system transcriptional repressor</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03664</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73807.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673006.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03664"/>
    <dbReference type="EnsemblBacteria" id="CTQ73807">
        <property type="protein sequence ID" value="CTQ73807"/>
        <property type="gene ID" value="LAX5112_03664"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045865">
        <property type="entry name" value="ACT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016867">
        <property type="entry name" value="GcvR"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF028103">
        <property type="entry name" value="GcvR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55021">
        <property type="entry name" value="SSF55021"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ73807.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="172" mass="17840" checksum="F873C3121671D3D6" modified="2015-12-09" version="1">MQDHLVFTVIAEDRSGLVEKIADVIAGAGGNWIESSMARLGGEFAGIVRISVPAENASQLTAALEALGSDGIDITLRSGQGSDNEALGASAHLDLVSQDHPGILRDITHILSEHKVSIEHLETSVEAGSMQGGFLFKASADLRLPSGLTPAQLSEALQATAADLMADISLAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AH79</accession>
    <name>A0A0M7AH79_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">6-carboxy-5,6,7,8-tetrahydropterin synthase</fullName>
            <ecNumber evidence="6">4.1.2.50</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="11">Queuosine biosynthesis protein QueD</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">LAX5112_03647</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Catalyzes the conversion of 7,8-dihydroneopterin triphosphate (H2NTP) to 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) and acetaldehyde.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>7,8-dihydroneopterin 3'-triphosphate + H2O = 6-carboxy-5,6,7,8-tetrahydropterin + acetaldehyde + 2 H(+) + triphosphate</text>
            <dbReference type="Rhea" id="RHEA:27966"/>
            <dbReference type="ChEBI" id="CHEBI:15343"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:18036"/>
            <dbReference type="ChEBI" id="CHEBI:58462"/>
            <dbReference type="ChEBI" id="CHEBI:61032"/>
            <dbReference type="EC" id="4.1.2.50"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="4">Purine metabolism; 7-cyano-7-deazaguanine biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the PTPS family. QueD subfamily.</text>
    </comment>
    <dbReference type="EC" id="4.1.2.50" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73756.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672990.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03647"/>
    <dbReference type="EnsemblBacteria" id="CTQ73756">
        <property type="protein sequence ID" value="CTQ73756"/>
        <property type="gene ID" value="LAX5112_03647"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00391"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070497">
        <property type="term" value="F:6-carboxy-5,6,7,8-tetrahydropterin synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.479.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007115">
        <property type="entry name" value="6-PTP_synth/QueD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038418">
        <property type="entry name" value="6-PTP_synth/QueD_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12589">
        <property type="entry name" value="PTHR12589"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01242">
        <property type="entry name" value="PTPS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0456">Lyase</keyword>
    <keyword evidence="8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0862">Zinc</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001293"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00002285"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00005061"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00008900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00012982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00018141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00031449"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ73756.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="132" mass="14587" checksum="859F5C7F1518E330" modified="2015-12-09" version="1">MFAVEVRDHVMIAHSFKGELFGPAQALHGATFVIDAAFLSEELDENGVVIDIGRAHEALKEVLAPLNYKNLDEVPEFAGINTTTEFLTKHIHDHLAEAARQDRLGRKGGELAAIRVTISESHVARAWYEAKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHU2</accession>
    <name>A0A0M7AHU2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Putative 3-hydroxybutyryl-CoA dehydrogenase</fullName>
            <ecNumber evidence="6">1.1.1.157</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">mmgB</name>
        <name evidence="6" type="ORF">LAX5112_03727</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the 3-hydroxyacyl-CoA dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.157" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74012.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673059.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03727"/>
    <dbReference type="EnsemblBacteria" id="CTQ74012">
        <property type="protein sequence ID" value="CTQ74012"/>
        <property type="gene ID" value="LAX5112_03727"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008691">
        <property type="term" value="F:3-hydroxybutyryl-CoA dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070403">
        <property type="term" value="F:NAD+ binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044248">
        <property type="term" value="P:cellular catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006631">
        <property type="term" value="P:fatty acid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901575">
        <property type="term" value="P:organic substance catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1040.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022694">
        <property type="entry name" value="3-OHacyl-CoA_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006180">
        <property type="entry name" value="3-OHacyl-CoA_DH_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006176">
        <property type="entry name" value="3-OHacyl-CoA_DH_NAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006108">
        <property type="entry name" value="3HC_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008927">
        <property type="entry name" value="6-PGluconate_DH-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013328">
        <property type="entry name" value="6PGD_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00725">
        <property type="entry name" value="3HCDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02737">
        <property type="entry name" value="3HCDH_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000105">
        <property type="entry name" value="HCDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48179">
        <property type="entry name" value="SSF48179"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00067">
        <property type="entry name" value="3HCDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0520">NAD</keyword>
    <keyword evidence="6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="3HCDH_N" evidence="5">
        <location>
            <begin position="7"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="domain" description="3HCDH" evidence="4">
        <location>
            <begin position="189"/>
            <end position="284"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="12"/>
            <end position="17"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="35"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="94"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="99"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="121"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="145"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="276"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="site" description="Important for catalytic activity" evidence="2">
        <location>
            <position position="142"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009463"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR000105-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR000105-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00725"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF02737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ74012.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="293" mass="32035" checksum="049EBCD91BDEB9EC" modified="2015-12-09" version="1">MAVEIKKIGVIGAGQMGSGIAHVCALAGYEVGLSDISVERIESGLASINGNLARQVSKSIITEEERTAALACLKPAEDVDLLSDADLVIESAVENEQVKRKIFSQLCPILKPEAILATNTSSISITRLAATTDRPERFIGIHFMNPVPIMELVELVRGIATEDETFEASKEFCRRLGKQIAVAEDFPAFMVNRILLPMINEAIYTLYEGVGSVESIDKAMKLGANHPMGPLQLADFIGLDTCLSIMQVLYEGLADTKYRPCPLLVKYVEAGWLGRKTQRGFYDYRGEVPVPTR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHX0</accession>
    <name>A0A0M7AHX0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03665</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73810.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ73810">
        <property type="protein sequence ID" value="CTQ73810"/>
        <property type="gene ID" value="LAX5112_03665"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021333">
        <property type="entry name" value="DUF2946"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11162">
        <property type="entry name" value="DUF2946"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ73810.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="133" mass="13836" checksum="59149FBCABDFA7C9" modified="2015-12-09" version="1">MGELRQNIRKLNAAVFVLLLPFLLSALLPQGFMPSLQKDQGFTVVLCTPDGMRTITLDADGKELPSGPMGGDEGKASNHCVFSGVGAVVVPVLASDSVLPVFASLASPFFAEASRPSSLERGQNGARAPPLGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AI77</accession>
    <name>A0A0M7AI77_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04001</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74845.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673292.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74845">
        <property type="protein sequence ID" value="CTQ74845"/>
        <property type="gene ID" value="LAX5112_04001"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="16"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="87"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="20"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="104"/>
            <end position="118"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74845.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="126" mass="13492" checksum="8FAF8368E932273C" modified="2015-12-09" version="1">MATTIERPIAAQVVAHATEYPADRDGDGTGYGRDKKRTAERQDQDTGSSNEDPAVLIDDHHTVDHTLDGIAAYKAAALEVLEPGVDHGPVHPLPGPVDKVPPQNVRHAYEDHPDGEEPPHAVNVAT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIH2</accession>
    <name>A0A0M7AIH2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">16 kDa heat shock protein A</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ibpA_2</name>
        <name evidence="5" type="ORF">LAX5112_03582</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2 3">Belongs to the small heat shock protein (HSP20) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73573.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03582"/>
    <dbReference type="EnsemblBacteria" id="CTQ73573">
        <property type="protein sequence ID" value="CTQ73573"/>
        <property type="gene ID" value="LAX5112_03582"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd06470">
        <property type="entry name" value="ACD_IbpA-B_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.790">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002068">
        <property type="entry name" value="A-crystallin/Hsp20_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037913">
        <property type="entry name" value="ACD_IbpA/B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008978">
        <property type="entry name" value="HSP20-like_chaperone"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00011">
        <property type="entry name" value="HSP20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49764">
        <property type="entry name" value="SSF49764"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01031">
        <property type="entry name" value="SHSP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 5" id="KW-0346">Stress response</keyword>
    <feature type="domain" description="SHSP" evidence="4">
        <location>
            <begin position="24"/>
            <end position="138"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00285"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU003616"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS01031"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ73573.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="139" mass="15601" checksum="81E8FC76021CADC5" modified="2015-12-09" version="1">MSAFSSPFMLGFDDIERVLDRVSKAANDGYPPYNIERLPKTDIQGDVIRITLAVAGFTRDQLDVSVEESQLVIRGRQIDDKTRQYLHRGIAARQFQRAFVLAEGIEILGADLKDGLLSIDLARPEPERVIRKIEISSGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIT8</accession>
    <name>A0A0M7AIT8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">27 kDa antigen Cfp30B</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03560</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73514.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03560"/>
    <dbReference type="EnsemblBacteria" id="CTQ73514">
        <property type="protein sequence ID" value="CTQ73514"/>
        <property type="gene ID" value="LAX5112_03560"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.180.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029068">
        <property type="entry name" value="Glyas_Bleomycin-R_OHBP_Dase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004360">
        <property type="entry name" value="Glyas_Fos-R_dOase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037523">
        <property type="entry name" value="VOC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00903">
        <property type="entry name" value="Glyoxalase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54593">
        <property type="entry name" value="SSF54593"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51819">
        <property type="entry name" value="VOC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="VOC" evidence="1">
        <location>
            <begin position="43"/>
            <end position="160"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51819"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73514.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="161" mass="17825" checksum="FDAF00D542FDDFAE" modified="2015-12-09" version="1">MAIAAGRDFTPSPRFPICNYNQKLLCLLLRLSSQEVAMWEHGQFWWNELMTRDAEKAKAFYGSTLGWTFSEMPVDGGGTYWVANLSDKPAGGIFEMRGPDFDGLPEHWFSYIAVDNIDERLELAKAHGATVTRPPFDVPGIGRIALLKDAGGAAQGWMTPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJA3</accession>
    <name>A0A0M7AJA3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">DNA polymerase III subunit chi</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03881</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74496.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673186.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03881"/>
    <dbReference type="EnsemblBacteria" id="CTQ74496">
        <property type="protein sequence ID" value="CTQ74496"/>
        <property type="gene ID" value="LAX5112_03881"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003887">
        <property type="term" value="F:DNA-directed DNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007459">
        <property type="entry name" value="DNA_pol3_chi"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036768">
        <property type="entry name" value="PolIII_chi_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38767">
        <property type="entry name" value="PTHR38767"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04364">
        <property type="entry name" value="DNA_pol3_chi"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF102400">
        <property type="entry name" value="SSF102400"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ74496.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="150" mass="17297" checksum="FF7CF3B907FED8DC" modified="2015-12-09" version="1">MSVEVVFYHLLHKPLELALPELLQKCLERNWKVVVQTGSQERCNALDAHLWTYQDDSFLPHGTKADGYAEHQPIYLTFEQDNPNEAEVRFLVDRAAPPALDPYKRAIYMFDGNDQGAVDEARTRWKEAKSAGFQIAYWQQTEAGGWERKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJF8</accession>
    <name>A0A0M7AJF8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Chemotaxis protein LafU</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">lafU</name>
        <name evidence="7" type="ORF">LAX5112_04088</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the MotB family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ75019.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04088"/>
    <dbReference type="EnsemblBacteria" id="CTQ75019">
        <property type="protein sequence ID" value="CTQ75019"/>
        <property type="gene ID" value="LAX5112_04088"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd07185">
        <property type="entry name" value="OmpA_C-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025713">
        <property type="entry name" value="MotB_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006665">
        <property type="entry name" value="OmpA-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036737">
        <property type="entry name" value="OmpA-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13677">
        <property type="entry name" value="MotB_plug"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00691">
        <property type="entry name" value="OmpA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103088">
        <property type="entry name" value="SSF103088"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51123">
        <property type="entry name" value="OMPA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="domain" description="OmpA-like" evidence="6">
        <location>
            <begin position="354"/>
            <end position="472"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="77"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="193"/>
            <end position="285"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="81"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="249"/>
            <end position="285"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008914"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00473"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ75019.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="474" mass="50617" checksum="770D50B3D29A9E2D" modified="2015-12-09" version="1">MDNMPNEIVIVRRRHTWDDDEKPHGVWKIAYADFMTALMAFFLVMWLINVTDESVRRGVAQYFNPVKLASTAPNRKGLNDPIVNGDTNENGTKLFTGKLGGTDEQESTLERSGEADVETEGVNASGAAEMKAAAGAQAASGEFTQSHPESILFTDPYAVLDTLAQKINVARTMESNPEGIGSGLEKEQGALGGEAYRDPFDPQFWQFRPGRGVDGAAAETAGLPTRPGSGNGAGQSADQADGDKSWNAPFETDGTTELAQTESGTGPTSETGTTSGDGPSEFTGTSKNQIVAHVSRRDQENTLAAEAEGGATESETVPGARLVAELTTVLDAAEGTLLENTAAQITVVRQDDGALISLTDDQNFGMFAIGSAEPRPELVSLLERLGKVISKTGAQIVITGHTDARPFKSKTYDNWRLSSARAHMALYMLSRGGVGADRFVRIEGAADRHLKNAEDPFAASNRRVEIYLLEEAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJQ0</accession>
    <name>A0A0M7AJQ0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Sigma-K factor</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">sigK</name>
        <name evidence="5" type="ORF">LAX5112_04013</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the sigma-70 factor family. ECF subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74867.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451072.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04013"/>
    <dbReference type="EnsemblBacteria" id="CTQ74867">
        <property type="protein sequence ID" value="CTQ74867"/>
        <property type="gene ID" value="LAX5112_04013"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016987">
        <property type="term" value="F:sigma factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006352">
        <property type="term" value="P:DNA-templated transcription, initiation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050896">
        <property type="term" value="P:response to stimulus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039425">
        <property type="entry name" value="RNA_pol_sigma-70-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014284">
        <property type="entry name" value="RNA_pol_sigma-70_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007627">
        <property type="entry name" value="RNA_pol_sigma70_r2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013249">
        <property type="entry name" value="RNA_pol_sigma70_r4_t2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013325">
        <property type="entry name" value="RNA_pol_sigma_r2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013324">
        <property type="entry name" value="RNA_pol_sigma_r3/r4-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43133">
        <property type="entry name" value="PTHR43133"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04542">
        <property type="entry name" value="Sigma70_r2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08281">
        <property type="entry name" value="Sigma70_r4_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88659">
        <property type="entry name" value="SSF88659"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88946">
        <property type="entry name" value="SSF88946"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02937">
        <property type="entry name" value="sigma70-ECF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Sigma70_r2" evidence="3">
        <location>
            <begin position="26"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="domain" description="Sigma70_r4_2" evidence="4">
        <location>
            <begin position="123"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="92"/>
            <end position="111"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010641"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF04542"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF08281"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ74867.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="188" mass="21412" checksum="A3854FC8435358A4" modified="2015-12-09" version="1">MAQTQYFSDLIVKVATSRDKAAFVELFDHFAPRLKGYLMKQGADDAVAEEVAQDVMVTLWRKADLFDPRKSSASTWLFRIARNRRIDRLRRQKTAELDPEEPALQPTPLPDVADEMDARLREERVRAAMASLPEEQKEVVRLAFFIGLSHSEISDQTGLPLGTVKSRIRLAFGRLRQLIETDEAVDVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="32" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKR0</accession>
    <name>A0A0M7AKR0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 8 9">Dihydroorotase</fullName>
            <shortName evidence="8">DHOase</shortName>
            <ecNumber evidence="4 8 9">3.5.2.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">pyrC_2</name>
        <name evidence="8" type="synonym">pyrC</name>
        <name evidence="11" type="ORF">LAX5112_04248</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 8">Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8 9">
            <text>(S)-dihydroorotate + H2O = H(+) + N-carbamoyl-L-aspartate</text>
            <dbReference type="Rhea" id="RHEA:24296"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30864"/>
            <dbReference type="ChEBI" id="CHEBI:32814"/>
            <dbReference type="EC" id="3.5.2.3"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="8 9">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="8 9">Binds 2 Zn(2+) ions per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2 8 9">Pyrimidine metabolism; UMP biosynthesis via de novo pathway; (S)-dihydroorotate from bicarbonate: step 3/3.</text>
    </comment>
    <comment type="subunit">
        <text evidence="8">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 8 9">Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class II DHOase subfamily.</text>
    </comment>
    <dbReference type="EC" id="3.5.2.3" evidence="4 8 9"/>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75469.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04248"/>
    <dbReference type="EnsemblBacteria" id="CTQ75469">
        <property type="protein sequence ID" value="CTQ75469"/>
        <property type="gene ID" value="LAX5112_04248"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00070">
        <property type="reaction ID" value="UER00117"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004151">
        <property type="term" value="F:dihydroorotase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044205">
        <property type="term" value="P:'de novo' UMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019856">
        <property type="term" value="P:pyrimidine nucleobase biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01294">
        <property type="entry name" value="DHOase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00219">
        <property type="entry name" value="PyrC_classII"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006680">
        <property type="entry name" value="Amidohydro-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004721">
        <property type="entry name" value="DHOdimr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002195">
        <property type="entry name" value="Dihydroorotase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032466">
        <property type="entry name" value="Metal_Hydrolase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43137">
        <property type="entry name" value="PTHR43137"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01979">
        <property type="entry name" value="Amidohydro_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001237">
        <property type="entry name" value="DHOdimr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51556">
        <property type="entry name" value="SSF51556"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00856">
        <property type="entry name" value="pyrC_dimer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00482">
        <property type="entry name" value="DIHYDROOROTASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00483">
        <property type="entry name" value="DIHYDROOROTASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 8 9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5 8 9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7 8 9" id="KW-0665">Pyrimidine biosynthesis</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 9" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Amidohydro-rel" evidence="10">
        <location>
            <begin position="13"/>
            <end position="322"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="8">
        <location>
            <begin position="17"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="active site" evidence="8">
        <location>
            <position position="249"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="15"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="17"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="43"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" description="via carbamate group" evidence="8">
        <location>
            <position position="101"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="138"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="176"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="221"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="249"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="253"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="265"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="modified residue" description="N6-carboxylysine" evidence="8">
        <location>
            <position position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002368"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004880"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005631"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012860"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00219"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU003440"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF01979"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ75469.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="355" mass="39129" checksum="18DC88A34CDD0DBD" modified="2015-12-09" version="1">MTQTELTIRQPDDWHLHLRDGAMLKAVLPHTSANFARAIIMPNLVPPVVRTEHAQAYRERILNVLPAGHNFEPLMTLYLTEATDPADVRKGAESGLITALKLYPSGATTNSENGVRDFEKIYPVLETMSDVDVPLLVHGEVTDADIDIFDREAVFLERVLSPIREKFPELRIVLEHATTSHAIDFVKAAKARTAATITTHHLIINRNAILAGGIKPHYYCLPVAKRETHRLALRQAATSGDPRFFLGTDSAPHPDHAKESACGCAGIYSSINTINCLAHVFEEDGALDKLEGFASLNGPAFYKLPPNEQRIRLFKSADPVSFPDKIQFPEGTVTVFDPGYPLHWQHEPVAAAAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALC3</accession>
    <name>A0A0M7ALC3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Nucleotidyltransferase domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_04242</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75457.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673508.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000021.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04242"/>
    <dbReference type="EnsemblBacteria" id="CTQ75457">
        <property type="protein sequence ID" value="CTQ75457"/>
        <property type="gene ID" value="LAX5112_04242"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1220.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.460.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013321">
        <property type="entry name" value="Arc_rbn_hlx_hlx"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043519">
        <property type="entry name" value="NT_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041633">
        <property type="entry name" value="Polbeta"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010985">
        <property type="entry name" value="Ribbon_hlx_hlx"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18765">
        <property type="entry name" value="Polbeta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47598">
        <property type="entry name" value="SSF47598"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81301">
        <property type="entry name" value="SSF81301"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Polbeta" evidence="2">
        <location>
            <begin position="82"/>
            <end position="129"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF18765"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ75457.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="161" mass="17337" checksum="87ABE74D3B39BB63" modified="2015-12-09" version="1">MSAQNTSKLVSDSAKTAFLSARVPVPLKNRFKALAAERGAKVQDLLQQIVQDYVDDQSAGPLAATDVIARLRGVRGDLEGQGIGHLYLFGSLARGEAQANSDIDLSYEPKEGAQLSLFELARLKDVLEVALEMPGRVDLAPRARLAPHVAEAAANDELRIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALX0</accession>
    <name>A0A0M7ALX0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="12">Putative multidrug export ATP-binding/permease protein</fullName>
            <ecNumber evidence="12">3.6.3.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">LAX5112_03918</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.-" evidence="12"/>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74604.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03918"/>
    <dbReference type="EnsemblBacteria" id="CTQ74604">
        <property type="protein sequence ID" value="CTQ74604"/>
        <property type="gene ID" value="LAX5112_03918"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008643">
        <property type="term" value="P:carbohydrate transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1560.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011527">
        <property type="entry name" value="ABC1_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036640">
        <property type="entry name" value="ABC1_TM_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039421">
        <property type="entry name" value="Type_1_exporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24221">
        <property type="entry name" value="PTHR24221"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00664">
        <property type="entry name" value="ABC_membrane"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90123">
        <property type="entry name" value="SSF90123"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50929">
        <property type="entry name" value="ABC_TM1F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 8 12" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="12" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="4 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0762">Sugar transport</keyword>
    <keyword evidence="3 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="35"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="71"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="149"/>
            <end position="169"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="175"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="265"/>
            <end position="283"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="11">
        <location>
            <begin position="36"/>
            <end position="318"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="10">
        <location>
            <begin position="352"/>
            <end position="585"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="384"/>
            <end position="391"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022597"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ74604.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="595" mass="64986" checksum="B04E96E65377D44A" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AM12</accession>
    <name>A0A0M7AM12_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">dTTP/UTP pyrophosphatase</fullName>
            <shortName evidence="3">dTTPase/UTPase</shortName>
            <ecNumber evidence="3">3.6.1.9</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">Nucleoside triphosphate pyrophosphatase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="3">Nucleotide pyrophosphatase</fullName>
            <shortName evidence="3">Nucleotide PPase</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="4" type="primary">yhdE</name>
        <name evidence="4" type="ORF">LAX5112_04501</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>H2O + UTP = diphosphate + H(+) + UMP</text>
            <dbReference type="Rhea" id="RHEA:29395"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:46398"/>
            <dbReference type="ChEBI" id="CHEBI:57865"/>
            <dbReference type="EC" id="3.6.1.9"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>dTTP + H2O = diphosphate + dTMP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:28534"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:37568"/>
            <dbReference type="ChEBI" id="CHEBI:63528"/>
            <dbReference type="EC" id="3.6.1.9"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="3">
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the Maf family. YhdE subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="3.6.1.9" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000025">
        <property type="protein sequence ID" value="CTQ76178.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673703.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000025.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04501"/>
    <dbReference type="EnsemblBacteria" id="CTQ76178">
        <property type="protein sequence ID" value="CTQ76178"/>
        <property type="gene ID" value="LAX5112_04501"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0036218">
        <property type="term" value="F:dTTP diphosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035529">
        <property type="term" value="F:NADH pyrophosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0036221">
        <property type="term" value="F:UTP diphosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009117">
        <property type="term" value="P:nucleotide metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00555">
        <property type="entry name" value="Maf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.950.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00528">
        <property type="entry name" value="Maf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029001">
        <property type="entry name" value="ITPase-like_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003697">
        <property type="entry name" value="Maf-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43213">
        <property type="entry name" value="PTHR43213"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02545">
        <property type="entry name" value="Maf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006305">
        <property type="entry name" value="Maf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52972">
        <property type="entry name" value="SSF52972"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00172">
        <property type="entry name" value="maf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="1 3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 3" id="KW-0546">Nucleotide metabolism</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" description="Proton acceptor" evidence="3">
        <location>
            <position position="79"/>
        </location>
    </feature>
    <feature type="site" description="Important for substrate specificity" evidence="3">
        <location>
            <position position="15"/>
        </location>
    </feature>
    <feature type="site" description="Important for substrate specificity" evidence="3">
        <location>
            <position position="80"/>
        </location>
    </feature>
    <feature type="site" description="Important for substrate specificity" evidence="3">
        <location>
            <position position="163"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023080"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00528"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ76178.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="208" mass="22101" checksum="47C751011DA0DC88" modified="2015-12-09" version="1">MTNAPQLILASASPRRLALLQQVGLEPDHLLPADIDETPKKFETPRALALRLARAKAEAVLQVAKNTDAMNGGVVLAADTVVGVGRRILPKAELTDQAVMCLSLLSGRGHRVFTGVAVAEPNGKIRTKLVETRVRFKRLSRQDVDDYISSGEWRGKAGGYAIQGLAGSFVVKLVGSYPAVVGLPLAETVNLLQSAGYPVHANWTTAGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AM97</accession>
    <name>A0A0M7AM97_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">NIPSNAP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04538</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000025">
        <property type="protein sequence ID" value="CTQ76255.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673727.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000025.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04538"/>
    <dbReference type="EnsemblBacteria" id="CTQ76255">
        <property type="protein sequence ID" value="CTQ76255"/>
        <property type="gene ID" value="LAX5112_04538"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012577">
        <property type="entry name" value="NIPSNAP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07978">
        <property type="entry name" value="NIPSNAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NIPSNAP" evidence="1">
        <location>
            <begin position="5"/>
            <end position="100"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07978"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76255.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="114" mass="13026" checksum="CAC056824FAD2A3E" modified="2015-12-09" version="1">MITCFIRYHIDPTKKAQFEEYARNWGQAIPRCGADLIGYFAPHEGSTTLAYGVYSIENLAAYEAYRARLSADPIGQENYAFAMREKFILREDRTFLKLASTPHGKLIGFEGEHQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMM4</accession>
    <name>A0A0M7AMM4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">TRAP transporter solute receptor, DctP family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_04327</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the bacterial solute-binding protein 7 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000022">
        <property type="protein sequence ID" value="CTQ75682.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008192745.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000022.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04327"/>
    <dbReference type="EnsemblBacteria" id="CTQ75682">
        <property type="protein sequence ID" value="CTQ75682"/>
        <property type="gene ID" value="LAX5112_04327"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071702">
        <property type="term" value="P:organic substance transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.190.170">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018389">
        <property type="entry name" value="DctP_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038404">
        <property type="entry name" value="TRAP_DctP_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33376">
        <property type="entry name" value="PTHR33376"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03480">
        <property type="entry name" value="DctP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0675">Receptor</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809544" evidence="3">
        <location>
            <begin position="23"/>
            <end position="337"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ75682.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="337" mass="37226" checksum="F42111FEB12D8157" modified="2015-12-09" version="1">MKNILVAGLVASASLFTATAHAEDRISAVHAFPETLIYTKSFLSFVDKVNEAGKGVVQIDVRGGPEAIGMFQQPDAVRDGIVDMVYTPGSFYGGALPEKDAMVGSNLTAVETRQNGGTELIDQIHQEKMGLKYLGWFDSGVCYNLWTRDEPTFDADGNLEVEGLKLRGNNVYNAFFSNYLGAQVIDLPTGEVYAALQRGVVDATGWTQIGLIDLKWNEFLNYRIEPCFFSTDLGVIVNLEKWDSLSDESKKILQDVAIQHEKDSVEALRKKRDEDFAALDAAGMISVSLEGEAKANYLAAAREKTWERMKGLMAEQPGGTDNYDRLIELFYDFDAAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMS6</accession>
    <name>A0A0M7AMS6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">2-dehydro-3-deoxyphosphooctonate aldolase</fullName>
            <ecNumber evidence="6">2.5.1.55</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">3-deoxy-D-manno-octulosonic acid 8-phosphate synthase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">KDO-8-phosphate synthase</fullName>
            <shortName evidence="6">KDO 8-P synthase</shortName>
            <shortName evidence="6">KDOPS</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">Phospho-2-dehydro-3-deoxyoctonate aldolase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6 8" type="primary">kdsA</name>
        <name evidence="8" type="ORF">LAX5112_04028</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 6">
            <text>D-arabinose 5-phosphate + H2O + phosphoenolpyruvate = 3-deoxy-alpha-D-manno-2-octulosonate-8-phosphate + phosphate</text>
            <dbReference type="Rhea" id="RHEA:14053"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57693"/>
            <dbReference type="ChEBI" id="CHEBI:58702"/>
            <dbReference type="ChEBI" id="CHEBI:85985"/>
            <dbReference type="EC" id="2.5.1.55"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3">Bacterial outer membrane biogenesis; lipopolysaccharide biosynthesis.</text>
    </comment>
    <comment type="pathway">
        <text evidence="4 6">Carbohydrate biosynthesis; 3-deoxy-D-manno-octulosonate biosynthesis; 3-deoxy-D-manno-octulosonate from D-ribulose 5-phosphate: step 2/3.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5 6">Belongs to the KdsA family.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.55" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ74904.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673319.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04028"/>
    <dbReference type="EnsemblBacteria" id="CTQ74904">
        <property type="protein sequence ID" value="CTQ74904"/>
        <property type="gene ID" value="LAX5112_04028"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00030"/>
    <dbReference type="UniPathway" id="UPA00357">
        <property type="reaction ID" value="UER00474"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008676">
        <property type="term" value="F:3-deoxy-8-phosphooctulonate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019294">
        <property type="term" value="P:keto-3-deoxy-D-manno-octulosonic acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00056">
        <property type="entry name" value="KDO8P_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006218">
        <property type="entry name" value="DAHP1/KDSA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006269">
        <property type="entry name" value="KDO8P_synthase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21057">
        <property type="entry name" value="PTHR21057"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00793">
        <property type="entry name" value="DAHP_synth_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01362">
        <property type="entry name" value="KDO8P_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6" id="KW-0448">Lipopolysaccharide biosynthesis</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 8" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="DAHP_synth_1" evidence="7">
        <location>
            <begin position="17"/>
            <end position="270"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001069"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004756"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00004845"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00010499"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00056"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00793"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ74904.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="283" mass="29375" checksum="036EC08CC28F15F2" modified="2015-12-09" version="1">MTEANRTVNVGSVSFNNSAPFSLIAGPCQLESRDHALECAAAVKDIAGGLGIPVVYKSSFDKANRTSLSATRGIGLNEALPIFAEIKETFGLPVLTDIHNAEQCAPVAEVVDVLQIPAFLCRQTDLLVAAAETGAVINVKKGQFLAPWDMKNVLRKITDSGNPNVLLTERGASFGYNTLVTDMRALPIMAQTGAPVVFDATHSVQQPGGLGGSSGGDREMVAVLARAAVAVGVGGVFIETHPDPENTTSSDGPNMIALRNLGALLAELKAIDAVVKKSAGTPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANA1</accession>
    <name>A0A0M7ANA1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Acetophenone carboxylase gamma subunit</fullName>
            <ecNumber evidence="3">6.4.1.8</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">apc3_3</name>
        <name evidence="3" type="ORF">LAX5112_04333</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="6.4.1.8" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000022">
        <property type="protein sequence ID" value="CTQ75700.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673551.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000022.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04333"/>
    <dbReference type="EnsemblBacteria" id="CTQ75700">
        <property type="protein sequence ID" value="CTQ75700"/>
        <property type="gene ID" value="LAX5112_04333"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016874">
        <property type="term" value="F:ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008040">
        <property type="entry name" value="Hydant_A_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002821">
        <property type="entry name" value="Hydantoinase_A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045079">
        <property type="entry name" value="Oxoprolinase_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11365">
        <property type="entry name" value="PTHR11365"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05378">
        <property type="entry name" value="Hydant_A_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01968">
        <property type="entry name" value="Hydantoinase_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="SSF53067"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0436">Ligase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Hydant_A_N" evidence="2">
        <location>
            <begin position="6"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="domain" description="Hydantoinase_A" evidence="1">
        <location>
            <begin position="199"/>
            <end position="488"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF05378"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ75700.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="687" mass="72308" checksum="2BC7B8D182B09E9F" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANB1</accession>
    <name>A0A0M7ANB1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">S-methyl-5'-thioadenosine phosphorylase</fullName>
            <ecNumber evidence="3">2.4.2.28</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">5'-methylthioadenosine phosphorylase</fullName>
            <shortName evidence="3">MTA phosphorylase</shortName>
            <shortName evidence="3">MTAP</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3 5" type="primary">mtnP</name>
        <name evidence="5" type="ORF">LAX5112_04169</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Catalyzes the reversible phosphorylation of S-methyl-5'-thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>phosphate + S-methyl-5'-thioadenosine = adenine + S-methyl-5-thio-alpha-D-ribose 1-phosphate</text>
            <dbReference type="Rhea" id="RHEA:11852"/>
            <dbReference type="ChEBI" id="CHEBI:16708"/>
            <dbReference type="ChEBI" id="CHEBI:17509"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58533"/>
            <dbReference type="EC" id="2.4.2.28"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3">Amino-acid biosynthesis; L-methionine biosynthesis via salvage pathway; S-methyl-5-thio-alpha-D-ribose 1-phosphate from S-methyl-5'-thioadenosine (phosphorylase route): step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">Homohexamer. Dimer of a homotrimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the PNP/MTAP phosphorylase family. MTAP subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.4.2.28" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75273.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673418.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04169"/>
    <dbReference type="EnsemblBacteria" id="CTQ75273">
        <property type="protein sequence ID" value="CTQ75273"/>
        <property type="gene ID" value="LAX5112_04169"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00904">
        <property type="reaction ID" value="UER00873"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017061">
        <property type="term" value="F:S-methyl-5-thioadenosine phosphorylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019509">
        <property type="term" value="P:L-methionine salvage from methylthioadenosine"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006166">
        <property type="term" value="P:purine ribonucleoside salvage"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd09010">
        <property type="entry name" value="MTAP_SsMTAPII_like_MTIP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1580">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01963">
        <property type="entry name" value="MTAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010044">
        <property type="entry name" value="MTAP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000845">
        <property type="entry name" value="Nucleoside_phosphorylase_d"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035994">
        <property type="entry name" value="Nucleoside_phosphorylase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018099">
        <property type="entry name" value="Purine_phosphorylase-2_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42679">
        <property type="entry name" value="PTHR42679"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01048">
        <property type="entry name" value="PNP_UDP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53167">
        <property type="entry name" value="SSF53167"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01694">
        <property type="entry name" value="MTAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01240">
        <property type="entry name" value="PNP_MTAP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 3 5" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="3" id="KW-0660">Purine salvage</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3 5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PNP_UDP_1" evidence="4">
        <location>
            <begin position="6"/>
            <end position="243"/>
        </location>
    </feature>
    <feature type="region of interest" description="Phosphate binding" evidence="3">
        <location>
            <begin position="54"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="region of interest" description="Phosphate binding" evidence="3">
        <location>
            <begin position="87"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="3">
        <location>
            <begin position="209"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="12"/>
        </location>
        <ligand>
            <name>phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="185"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="186"/>
        </location>
        <ligand>
            <name>phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
        </ligand>
    </feature>
    <feature type="site" description="Important for substrate specificity" evidence="3">
        <location>
            <position position="167"/>
        </location>
    </feature>
    <feature type="site" description="Important for substrate specificity" evidence="3">
        <location>
            <position position="222"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01963"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF01048"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ75273.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="292" mass="31638" checksum="5CB08F5202B7D22E" modified="2015-12-09" version="1">MSDAVLGIIGGSGIYDLPGLEDAQWISVESPWGTPSDQVRIGTIDGLKIVFLPRHGRGHVYSPTTINYRANIDVMKRCGVTDLLSVSACGSLKEKHEPGMFVLVDQFIDRTIAREKSFFGTGCVAHVSMATPVSPKLVDAVAAAAEAEGLKYHKGGTYLAMEGPQFSSLAESELYRTWNCDVIGMTNMPEAKLAREAEISYATVAMVTDYDSWHPDHGEVDIQAILKVLHDNAANAQRLVARVAKDLPREHQSCPAGSDTALEFALMTAPEKRDPELVAKLDAVAARVLNRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANK9</accession>
    <name>A0A0M7ANK9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Neu5Ac permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">siaT_25</name>
        <name evidence="5" type="ORF">LAX5112_04435</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ76012.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04435"/>
    <dbReference type="EnsemblBacteria" id="CTQ76012">
        <property type="protein sequence ID" value="CTQ76012"/>
        <property type="gene ID" value="LAX5112_04435"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010656">
        <property type="entry name" value="DctM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004681">
        <property type="entry name" value="TRAP_DctM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33362">
        <property type="entry name" value="PTHR33362"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06808">
        <property type="entry name" value="DctM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006066">
        <property type="entry name" value="HI0050"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="20"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="45"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="77"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="108"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="161"/>
            <end position="188"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="194"/>
            <end position="219"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="240"/>
            <end position="262"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="268"/>
            <end position="288"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="300"/>
            <end position="319"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="339"/>
            <end position="364"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="398"/>
            <end position="419"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="439"/>
            <end position="464"/>
        </location>
    </feature>
    <feature type="domain" description="DctM" evidence="4">
        <location>
            <begin position="32"/>
            <end position="460"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF06808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ76012.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="469" mass="48941" checksum="B2A423D2F3B35E2E" modified="2015-12-09" version="1">MSFLETLTSGAPGVFFGIGYSNPALVGVICMGLLLVFVLIGVRVVFAAGLVGLIGLVELIGWHAAAGSIGSIPHSKSVSFVLGLIPVFILIGYLAFHAGMTAQLFAAARAWIGWLPGGLAVATVFATAGFAAVSGASTATTAVFARVAIPEMLKAGYDRPLAAGVVAAGGTLASLIPPSAILVIYAIIVEESVGALLLAGFLPGLFSAAIYAAIIILWAKFRPEAGPSVRGISWRERFKSLPGVLPIAAVVGIIVSAVYTGWAAPTEAGALGAFVVLVMAWINGMRWPSLKAALMETSKLVVMIFSLIWGVLIFGRFLGFSGLPETFANWILSFDADPYLILAAILLGYVILGMFMDAIGLLLLTLPVVYPAVMALNGGPDVTAADSAFGMSGAQASIWFGIIVVKMAEVCLITPPIGINCFVVNGVRPDIPLTDVFRGIFLFFVADILTIAGLIFFPQIITWLPSMMN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQ61</accession>
    <name>A0A0M7AQ61_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Putative inner membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_04660</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the autoinducer-2 exporter (AI-2E) (TC 2.A.86) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000028">
        <property type="protein sequence ID" value="CTQ76651.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673844.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000028.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76651">
        <property type="protein sequence ID" value="CTQ76651"/>
        <property type="gene ID" value="LAX5112_04660"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002549">
        <property type="entry name" value="AI-2E-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21716">
        <property type="entry name" value="PTHR21716"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01594">
        <property type="entry name" value="AI-2E_transport"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="16"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="41"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="71"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="165"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="224"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="247"/>
            <end position="269"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="281"/>
            <end position="298"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="318"/>
            <end position="351"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009773"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ76651.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="402" mass="43061" checksum="3C258FC7E644FDCA" modified="2015-12-09" version="1">MTTNSQGENGPQVTKLRFQMFLIGFAALAIAAAFLGLIWDYLIALFMAAVISILAAPLFQRIVTLVGERKNLAVALTLLCLAVGVLLPLVIIIVLSAHQAASVASNLTNWAKTVDLEILQGSLPEWIPFKVDFAQIGAWIVTKITEAAGQIADFFVSILSQATKGTVSFFLNLFIMVYALVFFLPQEPNVFRQLLSHSALPNSVQQQLSDRVVSISRATIKGTFLIGAAQGFLGGFGFWMAGLNGAAFWGCVMAVFSIIPGIGPGLVIFPGVVYLAINGDFVAALGLTIWTVLVVTTVDNFLRPVLVGRDTKMPDLLVLISTFGGLAAFGAVGLIIGPVIAGLFLTIWAVLEEYLHSDGLADAPALEEIKTASGEKANEAVSQEIQDLRKELDVPRQDRQGQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQQ8</accession>
    <name>A0A0M7AQQ8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">3'(2'),5'-bisphosphate nucleotidase CysQ</fullName>
            <ecNumber evidence="3">3.1.3.7</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">3'(2'),5-bisphosphonucleoside 3'(2')-phosphohydrolase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="3">3'-phosphoadenosine 5'-phosphate phosphatase</fullName>
            <shortName evidence="3">PAP phosphatase</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="4" type="primary">cysQ_2</name>
        <name evidence="3" type="synonym">cysQ</name>
        <name evidence="4" type="ORF">LAX5112_04919</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Converts adenosine-3',5'-bisphosphate (PAP) to AMP.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>adenosine 3',5'-bisphosphate + H2O = AMP + phosphate</text>
            <dbReference type="Rhea" id="RHEA:10040"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58343"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="3.1.3.7"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="3">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cell inner membrane</location>
            <topology evidence="3">Peripheral membrane protein</topology>
            <orientation evidence="3">Cytoplasmic side</orientation>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the inositol monophosphatase superfamily. CysQ family.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.7" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000035">
        <property type="protein sequence ID" value="CTQ77475.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674075.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000035.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04919"/>
    <dbReference type="EnsemblBacteria" id="CTQ77475">
        <property type="protein sequence ID" value="CTQ77475"/>
        <property type="gene ID" value="LAX5112_04919"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008441">
        <property type="term" value="F:3'(2'),5'-bisphosphate nucleotidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046855">
        <property type="term" value="P:inositol phosphate dephosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006790">
        <property type="term" value="P:sulfur compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02095">
        <property type="entry name" value="CysQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006240">
        <property type="entry name" value="CysQ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020583">
        <property type="entry name" value="Inositol_monoP_metal-BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000760">
        <property type="entry name" value="Inositol_monophosphatase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00459">
        <property type="entry name" value="Inositol_P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00377">
        <property type="entry name" value="IMPHPHTASES"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01331">
        <property type="entry name" value="bisphos_cysQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00629">
        <property type="entry name" value="IMP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="3 4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 3" id="KW-0460">Magnesium</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="1 3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Substrate binding" evidence="3">
        <location>
            <begin position="86"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="65"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="84"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="86"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="87"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="224"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02095"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ77475.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="284" mass="30179" checksum="7A77E0FA39F987E5" modified="2015-12-09" version="1">MSDHTSDLLKLALEAGAAILDIYAKPFEVHEKTDGSPVTLADAAAEAIIMDRLTKLFPEIPVVAEEAVSAGDLPSVADTYFLVDPLDGTKEFLKKNGEFTVNIALVVAGVPVFGIVYAPALGDIYWGGSREERNPLQSDKAGAFYARVEEGKLGDPERISVRTPDAGGLTVLASRSHLSEETARLIDRLNVAETVSVGSSLKLCWIAAGKADLYPRLAPTMQWDIAAGHAIVSAACGAVVSAVTRQDLSYAIPENAVMSDLLNDHFLVLGDASERTSVLTALEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQR9</accession>
    <name>A0A0M7AQR9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative aminoglycoside phosphotransferase</fullName>
            <ecNumber evidence="2">2.7.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04771</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.7.1.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000030">
        <property type="protein sequence ID" value="CTQ76997.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673934.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000030.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04771"/>
    <dbReference type="EnsemblBacteria" id="CTQ76997">
        <property type="protein sequence ID" value="CTQ76997"/>
        <property type="gene ID" value="LAX5112_04771"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd05154">
        <property type="entry name" value="ACAD10_11_N-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041726">
        <property type="entry name" value="ACAD10_11_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002575">
        <property type="entry name" value="Aminoglycoside_PTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01636">
        <property type="entry name" value="APH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="SSF56112"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="APH" evidence="1">
        <location>
            <begin position="29"/>
            <end position="249"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01636"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76997.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="341" mass="37577" checksum="ABB3C20D0F8FC768" modified="2015-12-09" version="1">MTTAALDLEGLASWLEQNLPGFKGPLTAEKFNRGQSNPTFRLSAPSGAYVLRRKPPGVLLKSAHAVDREFRVQKALAATDVPVARMHVLCEDDDVIGSAFYIMDLVEGRNFDDPRIQDVDTATRSAIYDEMNRVLAAIHSVDLEAAGLADYGPAGNYYRRQIDRWTKQYRASETGTIAEMDQLIGWLDQNIPDDDGRRTLVHGDYRIDNMLFAKDSPECVAVLDWELSTLGHPFADLAALIMQWHCPPGAEGRGLEGVDRKELGIPEDQAFVEAYCKRMGISGIPEFGFYLAFCFFRMGAILQGVKKRALDGNASNPEQGLRLGKAVPGFAKGGLEAIQHG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARF3</accession>
    <name>A0A0M7ARF3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Sulfate adenylyltransferase subunit 2</fullName>
            <ecNumber evidence="3">2.7.7.4</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">ATP-sulfurylase small subunit</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="3">Sulfate adenylate transferase</fullName>
            <shortName evidence="3">SAT</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3 5" type="primary">cysD</name>
        <name evidence="5" type="ORF">LAX5112_05030</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">With CysN forms the ATP sulfurylase (ATPS) that catalyzes the adenylation of sulfate producing adenosine 5'-phosphosulfate (APS) and diphosphate, the first enzymatic step in sulfur assimilation pathway. APS synthesis involves the formation of a high-energy phosphoric-sulfuric acid anhydride bond driven by GTP hydrolysis by CysN coupled to ATP hydrolysis by CysD.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 3">
            <text>ATP + H(+) + sulfate = adenosine 5'-phosphosulfate + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:18133"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16189"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:58243"/>
            <dbReference type="EC" id="2.7.7.4"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3">Sulfur metabolism; hydrogen sulfide biosynthesis; sulfite from sulfate: step 1/3.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">Heterodimer composed of CysD, the smaller subunit, and CysN.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 3">Belongs to the PAPS reductase family. CysD subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.4" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000044">
        <property type="protein sequence ID" value="CTQ77725.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_05030"/>
    <dbReference type="EnsemblBacteria" id="CTQ77725">
        <property type="protein sequence ID" value="CTQ77725"/>
        <property type="gene ID" value="LAX5112_05030"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00140">
        <property type="reaction ID" value="UER00204"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004781">
        <property type="term" value="F:sulfate adenylyltransferase (ATP) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070814">
        <property type="term" value="P:hydrogen sulfide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000103">
        <property type="term" value="P:sulfate assimilation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019419">
        <property type="term" value="P:sulfate reduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01713">
        <property type="entry name" value="PAPS_reductase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00064">
        <property type="entry name" value="Sulf_adenylyltr_sub2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002500">
        <property type="entry name" value="PAPS_reduct"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011784">
        <property type="entry name" value="SO4_adenylTrfase_ssu"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01507">
        <property type="entry name" value="PAPS_reduct"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002936">
        <property type="entry name" value="CysDAde_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02039">
        <property type="entry name" value="CysD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3 5" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PAPS_reduct" evidence="4">
        <location>
            <begin position="18"/>
            <end position="246"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000262"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00064"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF01507"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ77725.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="291" mass="33323" checksum="629A59AF1AEBB5E1" modified="2015-12-09" version="1">MEAESIHIIREVAAEFSNPVMLYSIGKDSGVMLHLAMKAFYPSKPPFPLLHVDTTWKFRDMITFRDETAKQLGLELLVHTNQEGVEKGINPFDHGSSVHTHIMKTEALKQALNKYGFDAAFGGARRDEEKSRAKERVFSFRNSSHGWDPKNQRPELWNLYNARVAKGESIRAFPLSNWTELDIWQYILTENIPMVPLYLAAKRPVVERDGMLIMVDDERMTLQPGEVVEEKMIRFRTLGCYPLTGAIESDATTLPGIVKEMLIARTSERQGRLIDKDESASMEKKKREGYF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARP4</accession>
    <name>A0A0M7ARP4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Gcv operon activator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">gcvA_16</name>
        <name evidence="3" type="ORF">LAX5112_04797</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000031">
        <property type="protein sequence ID" value="CTQ77086.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673959.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000031.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04797"/>
    <dbReference type="EnsemblBacteria" id="CTQ77086">
        <property type="protein sequence ID" value="CTQ77086"/>
        <property type="gene ID" value="LAX5112_04797"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00039">
        <property type="entry name" value="HTHLYSR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="6"/>
            <end position="63"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ77086.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="309" mass="34658" checksum="EBE83EC65F95C83B" modified="2015-12-09" version="1">MSASLPPLPAVRAFDAVSRHLSFTKAGDELGMTQAAVSYQIKLLEEKLGFSLFERKPRKIELTPRGQQLADGVTDAFDRLRGTFHDVQESESSELVISSNTTFAVTWLSSRLFEFQIQNPTIAVRLVPFGPWEKPAFTDGDLTITACYQPPKGCYYHQLIQAEFTPMVSPLLAEKLGGIHEPADLLKAPIIDPEDHWWQTWFADAGLPDVDLSQNPSSRMGSQALEANRAIAGQGVAILTPYFVRDALANGQLIQPFELVSRIESESWNLSYPMQSKNSRKIRLFRDWLFSELEKDGRKLPFGREAETV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASG2</accession>
    <name>A0A0M7ASG2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Phospholipase D</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="11">Choline phosphatase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="14" type="primary">ywiE_2</name>
        <name evidence="14" type="ORF">LAX5112_04691</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Could be a virulence factor.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Secreted</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000028">
        <property type="protein sequence ID" value="CTQ76733.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673873.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000028.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04691"/>
    <dbReference type="EnsemblBacteria" id="CTQ76733">
        <property type="protein sequence ID" value="CTQ76733"/>
        <property type="gene ID" value="LAX5112_04691"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008808">
        <property type="term" value="F:cardiolipin synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032049">
        <property type="term" value="P:cardiolipin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022924">
        <property type="entry name" value="Cardiolipin_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025202">
        <property type="entry name" value="PLD-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001736">
        <property type="entry name" value="PLipase_D/transphosphatidylase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13091">
        <property type="entry name" value="PLDc_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00155">
        <property type="entry name" value="PLDc"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR04265">
        <property type="entry name" value="bac_cardiolipin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50035">
        <property type="entry name" value="PLD"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="10 12" id="KW-0472">Membrane</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0677">Repeat</keyword>
    <keyword evidence="5" id="KW-0964">Secreted</keyword>
    <keyword evidence="6 14" id="KW-0808">Transferase</keyword>
    <keyword evidence="7 12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 12" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="33"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="domain" description="PLD phosphodiesterase" evidence="13">
        <location>
            <begin position="208"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="domain" description="PLD phosphodiesterase" evidence="13">
        <location>
            <begin position="384"/>
            <end position="411"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003145"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00018392"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00029594"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS50035"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="CTQ76733.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="470" mass="52659" checksum="8A5B2E39DF84A663" modified="2015-12-09" version="1">MWVGFLAISLVLLETLAFYFSWRAIKSARTPQGSVGWVVFLISAPYVAVPVYLFLGHHKYAGYLTARRDSLTIRQDIDTWGARNAPEPDQVNPTYKVFEQIAELPIVGGNGVDLLIDGKETFPALFDAIDQAAHYILIQYYIVNDDELGRELKDHLIAAVGRGVTVRMMIDGVGCIKLPTKFIEELQSGGVQIIDPKTVRGPKTRFQLNLRNHRKTVVIDGTIGFTGGLNVGNEYKGLDPKFGPWRDTHARFTGPIVSQLQLVFAEDWSFLTSENLIGHLNWETNHALDNMAALLVPTGPGDKLDTGSMMFLSAIVAAKRRVWIASPYFVPDTVILAALKQAALRGVEVKILVPDFADHQIPWHAAFAYFDEVIEVGCEIWRYKEGFMHQKVVLVDDDLAAIGTANMDNRSFRLNFETMVLLFHKKAAHQIQEMLQADFLKSYRLETPLAQQSHKIRIGAPIARLFSPLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AT79</accession>
    <name>A0A0M7AT79_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">(R)-benzylsuccinyl-CoA dehydrogenase</fullName>
            <ecNumber evidence="9">1.3.8.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">bbsG</name>
        <name evidence="9" type="ORF">LAX5112_04770</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 5">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the acyl-CoA dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.3.8.3" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000030">
        <property type="protein sequence ID" value="CTQ76993.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673933.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000030.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04770"/>
    <dbReference type="EnsemblBacteria" id="CTQ76993">
        <property type="protein sequence ID" value="CTQ76993"/>
        <property type="gene ID" value="LAX5112_04770"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033734">
        <property type="term" value="F:(R)-benzylsuccinyl-CoA dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.540.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006091">
        <property type="entry name" value="Acyl-CoA_Oxase/DH_mid-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046373">
        <property type="entry name" value="Acyl-CoA_Oxase/DH_mid-dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036250">
        <property type="entry name" value="AcylCo_DH-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009075">
        <property type="entry name" value="AcylCo_DH/oxidase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013786">
        <property type="entry name" value="AcylCoA_DH/ox_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037069">
        <property type="entry name" value="AcylCoA_DH/ox_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009100">
        <property type="entry name" value="AcylCoA_DH/oxidase_NM_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00441">
        <property type="entry name" value="Acyl-CoA_dh_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02770">
        <property type="entry name" value="Acyl-CoA_dh_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02771">
        <property type="entry name" value="Acyl-CoA_dh_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47203">
        <property type="entry name" value="SSF47203"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56645">
        <property type="entry name" value="SSF56645"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0274">FAD</keyword>
    <keyword evidence="3 5" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="5 9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Acyl-CoA_dh_N" evidence="8">
        <location>
            <begin position="10"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="domain" description="Acyl-CoA_dh_M" evidence="7">
        <location>
            <begin position="139"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="domain" description="Acyl-CoA_dh_1" evidence="6">
        <location>
            <begin position="252"/>
            <end position="401"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009347"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU362125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00441"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF02770"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF02771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ76993.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="410" mass="45767" checksum="1B1A3F72773E5789" modified="2015-12-09" version="1">MDLGVTDRVRPLIEQVRRMAETEIAPLDAEYHKEVGKHPSGDRFLHTDRQIEILEGLKSKAKERGLWNFWLTDSERGFGLTTVEYAYLAEEMGKVGIAAEVFNCNAPDTGNMEVLERYGTQAHKNLWLKPLLTGDIRSAYLMTEPDEASSDATNIALSAVKDGDEWVLNGEKWWASGAGDSRCKLYIVMARTDPDAHKHSRHSMFLIPADADGLEVLRPMHVFNTDDAPHGHMHIRFTNVRVPKADLVLGQGRGFEVAQGRLGPGRIHHCMRAIGQAERALELLCKRALSREAFGKKLADLGANHDIIANARMEIEMARLLCLKAAWMMDTQGTRAAQPWISKIKVIAPLMALKVVDEAMQVHGAAGISQDFPLASMWAHLRTLRFADGPDAVHRRQVARVELRKYTNAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ATZ4</accession>
    <name>A0A0M7ATZ4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04853</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000032">
        <property type="protein sequence ID" value="CTQ77253.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77253">
        <property type="protein sequence ID" value="CTQ77253"/>
        <property type="gene ID" value="LAX5112_04853"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="45"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="79"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="111"/>
            <end position="129"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77253.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="154" mass="15857" checksum="E4D4B4D12C01A0C4" modified="2015-12-09" version="1">MNGTLFIWQLIKIIVGFVVAVTASGLFLSWGLFQPGSPEADPAAFAAMIGAAFVTASVLGAVAFVPAACVILVSEIARLSGIVFHVASAGAIAFLLWTLDGTADAGLRPGSPVVLAAGFVSGAVYWIIAGRTAGNWLLRTKTAPHEEKATDEDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZLZ0</accession>
    <name>A0A0M6ZLZ0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Agmatine deiminase</fullName>
            <ecNumber evidence="2">3.5.3.12</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">aguA</name>
        <name evidence="2" type="ORF">LAX5112_00065</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.5.3.12" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63785.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670120.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00065"/>
    <dbReference type="EnsemblBacteria" id="CTQ63785">
        <property type="protein sequence ID" value="CTQ63785"/>
        <property type="gene ID" value="LAX5112_00065"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047632">
        <property type="term" value="F:agmatine deiminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004668">
        <property type="term" value="F:protein-arginine deiminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009446">
        <property type="term" value="P:putrescine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007466">
        <property type="entry name" value="Peptidyl-Arg-deiminase_porph"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31377">
        <property type="entry name" value="PTHR31377"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04371">
        <property type="entry name" value="PAD_porph"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ63785.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="344" mass="38032" checksum="7D357C043344CF98" modified="2015-12-09" version="1">MSAQASTTGLPEGYFVPAEDDPHERTFMQWPVNRTVHPDRWFLEDLQQTIAEIANTIAEFEPVVMLAGAEHHANARKRLSQSVDLWDIPTDDLWCRDAGPLFAVNDQGGLVVSGMKFNGWGEKQVHDNDGQIVSRVAERMGLTVYPSGLTGEPGGVEWDGHGTLLAHESCWVNPNRNDLSRAEIEDRLLRAYGADKMIWAPGVAGHDITDDHIDALARFVRPGEVLIQVPYPEDDDIFSVSARKTLAILKSSTDAEGRHLKITEVPSPGRIRVTSDDFLASYANYYVLNDAVVCAEFGDKDTDGEMQRTLQRLYPDREVVALNVDGLGETGGGIHCATQQQPRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZM16</accession>
    <name>A0A0M6ZM16_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Leucine/isoleucine/valine transporter permease subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_00069</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63798.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670121.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00069"/>
    <dbReference type="EnsemblBacteria" id="CTQ63798">
        <property type="protein sequence ID" value="CTQ63798"/>
        <property type="gene ID" value="LAX5112_00069"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015658">
        <property type="term" value="F:branched-chain amino acid transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06581">
        <property type="entry name" value="TM_PBP1_LivM_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001851">
        <property type="entry name" value="ABC_transp_permease"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043428">
        <property type="entry name" value="LivM-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30482">
        <property type="entry name" value="PTHR30482"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02653">
        <property type="entry name" value="BPD_transp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="12"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="49"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="91"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="123"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="200"/>
            <end position="220"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="247"/>
            <end position="268"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="288"/>
            <end position="312"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="324"/>
            <end position="347"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="353"/>
            <end position="374"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ63798.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="401" mass="43675" checksum="C7B8C269DAF39E85" modified="2015-12-09" version="1">MLGLNKKDTSLFILVLLLVVFAPFLLNPFPENSELAQFNAGYPDLMQRFLIFGIFAIGFNILFGLTGYLSFGHAAFLGVGSYAGVWMMKLLTMNVVPAIIISVIFAGLFSVVVGYISLRRSGIYFSILTLAFAQMSFSLAYSVLTPITNGETGLQLALDDPRILGVSQVDGSIPPANFFGLPMRESFELTMGGWLFTFNVGYYLCAVVMMIAFYIAIRIFRSPFGMMLRAVKSNQQRMNFTGLNSKPYTLAAFVISGMYAGLAGGLMVAMDPLAGAERMQWTASGEVVLMTILGGAGTLIGPVLGAGFIKYFENIFSKINDNILYGWFSGLPEGIADFLVFVIHPFIGKGWHLTLGIMFMLIVIFLPGGIMEGFERIGRLFKRKPSSMESSGGNPSAAPAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZN45</accession>
    <name>A0A0M6ZN45_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Sarcosine oxidase subunit beta</fullName>
            <ecNumber evidence="2">1.5.3.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">soxB_1</name>
        <name evidence="2" type="ORF">LAX5112_00059</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.5.3.1" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63767.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008192553.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00059"/>
    <dbReference type="EnsemblBacteria" id="CTQ63767">
        <property type="protein sequence ID" value="CTQ63767"/>
        <property type="gene ID" value="LAX5112_00059"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008115">
        <property type="term" value="F:sarcosine oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046653">
        <property type="term" value="P:tetrahydrofolate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006076">
        <property type="entry name" value="FAD-dep_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001763">
        <property type="entry name" value="Rhodanese-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006278">
        <property type="entry name" value="SoxB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01266">
        <property type="entry name" value="DAO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01373">
        <property type="entry name" value="soxB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50206">
        <property type="entry name" value="RHODANESE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Rhodanese" evidence="1">
        <location>
            <begin position="35"/>
            <end position="79"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50206"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ63767.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="417" mass="45370" checksum="47A3A264C22FDF2A" modified="2015-12-09" version="1">MKRYSFLELAKNAFSAHQNWGRQWRAPEPKAEYDVVIIGAGGHGLATAYYLAKEHGVRNVAVLEKGWLGGGNTGRNTTIVRSNYLWEESAALYNHAIDLWDGLSQELNYNVMYSARGVMMLAHTVHDVQVAQRHIHANRLAGVQNEWLTPEQAKEYCPPLNISKNIRYPVMGAALQRVGGTARHDAVAWGYARGADDMGVDIIQNCLVTGIKRGADGAVEGVETAKGFIKAKKVGVVAAGNTTTVMDMAGVRMPLESYPLQALVSEPVKPAFPCVVMSNTIHAYISQSDKGELVIGAGTDQFISYSQTGGIHISNHTIDAICELFPHFRRMRMLRNWGGIVDVTPDRSPILSKTPVQGLYVNCGWGTGGFKATPGSGHVFAHTIAKDEPHPINAPFTIDRFKTGRLIDEAAAAAVAH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZN81</accession>
    <name>A0A0M6ZN81_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Transcription-repair-coupling factor</fullName>
            <shortName evidence="8">TRCF</shortName>
            <ecNumber evidence="8">3.6.4.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8 11" type="primary">mfd</name>
        <name evidence="11" type="ORF">LAX5112_00221</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="8">In the C-terminal section; belongs to the helicase family. RecG subfamily.</text>
    </comment>
    <comment type="similarity">
        <text evidence="8">In the N-terminal section; belongs to the UvrB family.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.-" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64218.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670218.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00221"/>
    <dbReference type="EnsemblBacteria" id="CTQ64218">
        <property type="protein sequence ID" value="CTQ64218"/>
        <property type="gene ID" value="LAX5112_00221"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003684">
        <property type="term" value="F:damaged DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004386">
        <property type="term" value="F:helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000716">
        <property type="term" value="P:transcription-coupled nucleotide-excision repair, DNA damage recognition"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.50">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00969">
        <property type="entry name" value="TRCF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036101">
        <property type="entry name" value="CarD-like/TRCF_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003711">
        <property type="entry name" value="CarD-like/TRCF_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004576">
        <property type="entry name" value="Mfd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037235">
        <property type="entry name" value="TRCF-like_C_D7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005118">
        <property type="entry name" value="TRCF_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041471">
        <property type="entry name" value="UvrB_inter"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02559">
        <property type="entry name" value="CarD_CdnL_TRCF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03461">
        <property type="entry name" value="TRCF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17757">
        <property type="entry name" value="UvrB_inter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01058">
        <property type="entry name" value="CarD_TRCF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00982">
        <property type="entry name" value="TRCF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141259">
        <property type="entry name" value="SSF141259"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF143517">
        <property type="entry name" value="SSF143517"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00580">
        <property type="entry name" value="mfd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2 8" id="KW-0227">DNA damage</keyword>
    <keyword evidence="7 8" id="KW-0234">DNA repair</keyword>
    <keyword evidence="6 8" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-0347">Helicase</keyword>
    <keyword evidence="3 8 11" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="9">
        <location>
            <begin position="630"/>
            <end position="791"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase C-terminal" evidence="10">
        <location>
            <begin position="812"/>
            <end position="966"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00969"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ64218.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="1161" mass="127533" checksum="A2DFBCF0DA69134A" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZND0</accession>
    <name>A0A0M6ZND0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Bacteriocin biosynthesis docking scaffold, SagD family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00093</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63857.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670132.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00093"/>
    <dbReference type="EnsemblBacteria" id="CTQ63857">
        <property type="protein sequence ID" value="CTQ63857"/>
        <property type="gene ID" value="LAX5112_00093"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003776">
        <property type="entry name" value="YcaO-like_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02624">
        <property type="entry name" value="YcaO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51664">
        <property type="entry name" value="YCAO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="YcaO" evidence="1">
        <location>
            <begin position="88"/>
            <end position="452"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ63857.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="452" mass="49039" checksum="60F3148A3749BB0C" modified="2015-12-09" version="1">MHRFKSGVLNGLASAGLVMQTGRDVKPSNPDAAQALQLFAPVLQTGRVRLVPVAFPGCPIHFCTAVVTPHNSDEQRAKNATGSFAAGGQANTKVGAAISCVGEVAERLTLCSLGHDDPRVVAVTKGEYQAELASILGFSEAQMSDLLRKRTELGCGSRGSLIDWSKLSNRCIRVSNLLNGSAARLPAFAALFGEVVLEKGLTVGVSSTVGCAVWSDLEGARERAVLELAERDAVAQAWYNRLGITLVPEPVLREKISDDLMKYLSRRIRKTTIFRVETDLPVHVAVAISHRGDGFAAAFGACAEWDIGSAMFGAITEMLQGEISLSAMETAYSDPQHAQGSGIPIQLRYAREKSILDDWPFGETSEKGACFEDKAFSFDGLLEALREKGITVWEFDATRPDLGVPCIKLFSPELCTWQPRFGKDRLFQGVVERGLRTEPEREEVFAGRSFPF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZNG9</accession>
    <name>A0A0M6ZNG9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Glutamine transport ATP-binding protein GlnQ</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">glnQ_1</name>
        <name evidence="6" type="ORF">LAX5112_00107</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63897.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670141.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00107"/>
    <dbReference type="EnsemblBacteria" id="CTQ63897">
        <property type="protein sequence ID" value="CTQ63897"/>
        <property type="gene ID" value="LAX5112_00107"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015424">
        <property type="term" value="F:ABC-type amino acid transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030679">
        <property type="entry name" value="ABC_ATPase_HisP-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF039085">
        <property type="entry name" value="ABC_ATPase_HisP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="27"/>
            <end position="261"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="59"/>
            <end position="66"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ63897.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="267" mass="30498" checksum="7B9781B52971D7B6" modified="2015-12-09" version="1">MTENALRDDDLAADRTKMKVSDTDVAIEIKNMNKWYGDFHVLRDINLRVMSGERIVICGPSGSGKSTMIRCINRLEEHQAGQIIVEGTELTDDLKKIDEIRREVGMCFQHFNLFPHLTILENCTLAPIWVRKMPKKEAEDVAMHYLERVKIPEQALKYPGQLSGGQQQRVAIARSLCMSPKIMLFDEPTSALDPEMIKEVLDVMVGLAEEGMTMLCVTHEMGFARKVANRVIFMDAGQIVEQNEPEEFFTNPQHERTKLFLSQILHH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZNS7</accession>
    <name>A0A0M6ZNS7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Fumarate hydratase class II</fullName>
            <shortName evidence="2">Fumarase C</shortName>
            <ecNumber evidence="2">4.2.1.2</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="2">Aerobic fumarase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="2">Iron-independent fumarase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="2 5" type="primary">fumC</name>
        <name evidence="5" type="ORF">LAX5112_00286</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>(S)-malate = fumarate + H2O</text>
            <dbReference type="Rhea" id="RHEA:12460"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15589"/>
            <dbReference type="ChEBI" id="CHEBI:29806"/>
            <dbReference type="EC" id="4.2.1.2"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Carbohydrate metabolism; tricarboxylic acid cycle; (S)-malate from fumarate: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Homotetramer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="miscellaneous">
        <text evidence="2">There are 2 substrate-binding sites: the catalytic A site, and the non-catalytic B site that may play a role in the transfer of substrate or product between the active site and the solvent. Alternatively, the B site may bind allosteric effectors.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.2" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64408.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670264.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00286"/>
    <dbReference type="EnsemblBacteria" id="CTQ64408">
        <property type="protein sequence ID" value="CTQ64408"/>
        <property type="gene ID" value="LAX5112_00286"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00223">
        <property type="reaction ID" value="UER01007"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045239">
        <property type="term" value="C:tricarboxylic acid cycle enzyme complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004333">
        <property type="term" value="F:fumarate hydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006106">
        <property type="term" value="P:fumarate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006099">
        <property type="term" value="P:tricarboxylic acid cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01362">
        <property type="entry name" value="Fumarase_classII"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.275.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00743">
        <property type="entry name" value="FumaraseC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005677">
        <property type="entry name" value="Fum_hydII"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024083">
        <property type="entry name" value="Fumarase/histidase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018951">
        <property type="entry name" value="Fumarase_C_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020557">
        <property type="entry name" value="Fumarate_lyase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000362">
        <property type="entry name" value="Fumarate_lyase_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022761">
        <property type="entry name" value="Fumarate_lyase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008948">
        <property type="entry name" value="L-Aspartase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11444">
        <property type="entry name" value="PTHR11444"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10415">
        <property type="entry name" value="FumaraseC_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00206">
        <property type="entry name" value="Lyase_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00149">
        <property type="entry name" value="FUMRATELYASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48557">
        <property type="entry name" value="SSF48557"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00979">
        <property type="entry name" value="fumC_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00163">
        <property type="entry name" value="FUMARATE_LYASES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2 5" id="KW-0456">Lyase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0816">Tricarboxylic acid cycle</keyword>
    <feature type="domain" description="Lyase_1" evidence="3">
        <location>
            <begin position="13"/>
            <end position="343"/>
        </location>
    </feature>
    <feature type="domain" description="FumaraseC_C" evidence="4">
        <location>
            <begin position="409"/>
            <end position="461"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="2">
        <location>
            <begin position="99"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding (B site)" evidence="2">
        <location>
            <begin position="130"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="2">
        <location>
            <begin position="140"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="2">
        <location>
            <begin position="325"/>
            <end position="327"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor/acceptor" evidence="2">
        <location>
            <position position="189"/>
        </location>
    </feature>
    <feature type="active site" evidence="2">
        <location>
            <position position="319"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="188"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="320"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="site" description="Important for catalytic activity" evidence="2">
        <location>
            <position position="332"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009084"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00743"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00206"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF10415"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ64408.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="465" mass="49231" checksum="7EE10058633A5656" modified="2015-12-09" version="1">MSQNVRTETDSFGALEIPADKYYGAQTARSLINFPIGGETMPRPLIHALGVIKQAAARVNAAQGKLDPKLADAIERAASEVAAGMLDDHFPLVVWQTGSGTQTNMNANEVIANRAIELLGGVVGSKTPVHPNDHCNMSQSSNDTFPTAMHISAATEIKEKLLPALAHLQSALEQKSEEWAHIVKIGRTHTQDATPLTLGQEFGGYAAQLALGMERVTEGLNGLYALAQGGTAVGTGLNTKKGFDTAFAAEVAAIAGLPFHTASNKFEALAAHDACVYAHGALNTVAVSLFKIANDIRFLGSGPRSGLGELSLPENEPGSSIMPGKVNPTQCEAMTMVCAQVYGNQSTISFAGSQGHFELNVYKPVMAHAMLQSVKLLADASISFTDRCVSGIKANEDNITRLMERSLMLVTALAPAIGYDKATEIAKTAHKNGTSLREEALSLGYVTETEFDALVRPEKMIGPSD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="31" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPC0</accession>
    <name>A0A0M6ZPC0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 7">Cobyric acid synthase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7 10" type="primary">cobQ</name>
        <name evidence="10" type="ORF">LAX5112_00132</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6 7">Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation.</text>
    </comment>
    <comment type="pathway">
        <text evidence="1 7">Cofactor biosynthesis; adenosylcobalamin biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the CobB/CobQ family. CobQ subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63970.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670157.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00132"/>
    <dbReference type="EnsemblBacteria" id="CTQ63970">
        <property type="protein sequence ID" value="CTQ63970"/>
        <property type="gene ID" value="LAX5112_00132"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00148"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015420">
        <property type="term" value="F:ABC-type vitamin B12 transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009236">
        <property type="term" value="P:cobalamin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006541">
        <property type="term" value="P:glutamine metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01750">
        <property type="entry name" value="GATase1_CobQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00028">
        <property type="entry name" value="CobQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002586">
        <property type="entry name" value="CobQ/CobB/MinD/ParA_Nub-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033949">
        <property type="entry name" value="CobQ_GATase1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004459">
        <property type="entry name" value="CobQ_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011698">
        <property type="entry name" value="GATase_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21343:SF1">
        <property type="entry name" value="PTHR21343:SF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01656">
        <property type="entry name" value="CbiA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07685">
        <property type="entry name" value="GATase_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="SSF52317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00313">
        <property type="entry name" value="cobQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7" id="KW-0169">Cobalamin biosynthesis</keyword>
    <keyword evidence="5 7" id="KW-0315">Glutamine amidotransferase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CbiA" evidence="8">
        <location>
            <begin position="12"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="domain" description="GATase_3" evidence="9">
        <location>
            <begin position="258"/>
            <end position="447"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="7">
        <location>
            <position position="338"/>
        </location>
    </feature>
    <feature type="active site" evidence="7">
        <location>
            <position position="440"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004953"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006205"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00019833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022573"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00025166"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00028"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF01656"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF07685"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ63970.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="495" mass="52535" checksum="80962645371BCDAE" modified="2015-12-09" version="1">MTNSTGRRTPALMIQGTGSNVGKSLIVAGLCRLYANRGMTVRPFKPQNMSNNAAVTSDGGEIGRAQALQAMGCRVPLTVHMNPVLLKPETDTGAQIIVQGKRFGTMRAREYGKQKAELLPKVLESFSKLQSDADLVIVEGAGSPAEINLRAGDIANMGFAEAADLPVVLCADIDRGGVIASVVGTHAVLEPSEQERIKAFFINRFRGDPSLFDDGMREIAQRTGWQGLGVVPWFADANKLPAEDALDLASGAGRGGIKIVVPVISRIANFDDLDPLRMEPDVSLELIGPGTPLPGNADLVLLPGSKSTIGDLAFFRKQGWHIDLAAHVRRGGHVLGICGGYQMLGKTISDPDGIEGTAGTVEGLGLVDVETVLTPHKSLVEAEGKHLASGASVKGYEIHIGRTSGPDCARPYLHIRDAGGTPKLDGAQSSDGRIAGTYLHGLFTDDDFRKTYLNGFGAVSDLAYEHQIDAVLDDLAKHLEGVLDIEAILEIAINR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPK6</accession>
    <name>A0A0M6ZPK6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Nitrogen regulation protein NR(I)</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">glnG</name>
        <name evidence="11" type="ORF">LAX5112_00244</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64287.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670232.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00244"/>
    <dbReference type="EnsemblBacteria" id="CTQ64287">
        <property type="protein sequence ID" value="CTQ64287"/>
        <property type="gene ID" value="LAX5112_00244"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002197">
        <property type="entry name" value="HTH_Fis"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002078">
        <property type="entry name" value="Sigma_54_int"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025943">
        <property type="entry name" value="Sigma_54_int_dom_ATP-bd_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025944">
        <property type="entry name" value="Sigma_54_int_dom_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02954">
        <property type="entry name" value="HTH_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00158">
        <property type="entry name" value="Sigma54_activat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01590">
        <property type="entry name" value="HTHFIS"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00676">
        <property type="entry name" value="SIGMA54_INTERACT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00688">
        <property type="entry name" value="SIGMA54_INTERACT_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50045">
        <property type="entry name" value="SIGMA54_INTERACT_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0010">Activator</keyword>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0804">Transcription</keyword>
    <keyword evidence="4" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="3" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="domain" description="Response regulatory" evidence="10">
        <location>
            <begin position="4"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="domain" description="Sigma-54 factor interaction" evidence="9">
        <location>
            <begin position="142"/>
            <end position="368"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="8">
        <location>
            <position position="53"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023159"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50045"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ64287.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="455" mass="50021" checksum="6FD007122A62A0EE" modified="2015-12-09" version="1">MAHDILVVDDETDIREMIAGILDDDGYGTRTAHDSDSAIAAVKERKPSLVILDIWLMGSRLDGLALLDQFKETDPDLPVVIISGHGNIETAVSAIKRGAYDYIEKPFKADRLVHIVERALEASSLRREVRDLRQRSGETSDIVGDSSAANGLRQTIEKIAATNSRILISGPSGSGKERAARMIHDLSPRAKSPFVVLNAATITPSRMEEELFGIEDESGNLRKIGALEEAHGGTLYLDEVADMPAETQGKILRVLVEQSFSRVGGTGKVQVDIRILSSTSKNLEEHIATGLFRQDLYHRLSVVPLRVPGLAERREDIPVLVSHFMEQISAASGIPLRPIGDDAMAVLQTHDWPGNVRQLRNNVERLLILSRGEPDSTITADLLPAEIGETLPSLPSSGTGEHLMSVPLREAREIFEREYLQAQIKRFDGNISRTAEFVGMERSALHRKLKTLGMT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="44" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPU7</accession>
    <name>A0A0M6ZPU7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="14">Bifunctional enzyme IspD/IspF</fullName>
        </recommendedName>
        <domain>
            <recommendedName>
                <fullName evidence="14">2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase</fullName>
                <ecNumber evidence="14">2.7.7.60</ecNumber>
            </recommendedName>
            <alternativeName>
                <fullName evidence="14">4-diphosphocytidyl-2C-methyl-D-erythritol synthase</fullName>
            </alternativeName>
            <alternativeName>
                <fullName evidence="14">MEP cytidylyltransferase</fullName>
                <shortName evidence="14">MCT</shortName>
            </alternativeName>
        </domain>
        <domain>
            <recommendedName>
                <fullName evidence="14">2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase</fullName>
                <shortName evidence="14">MECDP-synthase</shortName>
                <shortName evidence="14">MECPP-synthase</shortName>
                <shortName evidence="14">MECPS</shortName>
                <ecNumber evidence="14">4.6.1.12</ecNumber>
            </recommendedName>
        </domain>
    </protein>
    <gene>
        <name evidence="14 16" type="primary">ispDF</name>
        <name evidence="16" type="ORF">LAX5112_00239</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="17" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="14">Bifunctional enzyme that catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2 14">
            <text>2-C-methyl-D-erythritol 4-phosphate + CTP + H(+) = 4-CDP-2-C-methyl-D-erythritol + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:13429"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:37563"/>
            <dbReference type="ChEBI" id="CHEBI:57823"/>
            <dbReference type="ChEBI" id="CHEBI:58262"/>
            <dbReference type="EC" id="2.7.7.60"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 14">
            <text>4-CDP-2-C-methyl-D-erythritol 2-phosphate = 2-C-methyl-D-erythritol 2,4-cyclic diphosphate + CMP</text>
            <dbReference type="Rhea" id="RHEA:23864"/>
            <dbReference type="ChEBI" id="CHEBI:57919"/>
            <dbReference type="ChEBI" id="CHEBI:58483"/>
            <dbReference type="ChEBI" id="CHEBI:60377"/>
            <dbReference type="EC" id="4.6.1.12"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="3 14">
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="5 14">Isoprenoid biosynthesis; isopentenyl diphosphate biosynthesis via DXP pathway; isopentenyl diphosphate from 1-deoxy-D-xylulose 5-phosphate: step 2/6.</text>
    </comment>
    <comment type="pathway">
        <text evidence="4 14">Isoprenoid biosynthesis; isopentenyl diphosphate biosynthesis via DXP pathway; isopentenyl diphosphate from 1-deoxy-D-xylulose 5-phosphate: step 4/6.</text>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the IspD/TarI cytidylyltransferase family. IspD subfamily.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the IspF family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="14">In the C-terminal section; belongs to the IspF family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="14">In the N-terminal section; belongs to the IspD/TarI cytidylyltransferase family. IspD subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="14">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.60" evidence="14"/>
    <dbReference type="EC" id="4.6.1.12" evidence="14"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64272.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00239"/>
    <dbReference type="EnsemblBacteria" id="CTQ64272">
        <property type="protein sequence ID" value="CTQ64272"/>
        <property type="gene ID" value="LAX5112_00239"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00056">
        <property type="reaction ID" value="UER00093"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008685">
        <property type="term" value="F:2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050518">
        <property type="term" value="F:2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019288">
        <property type="term" value="P:isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016114">
        <property type="term" value="P:terpenoid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd02516">
        <property type="entry name" value="CDP-ME_synthetase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00554">
        <property type="entry name" value="MECDP_synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.50">
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00108">
        <property type="entry name" value="IspD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01520">
        <property type="entry name" value="IspDF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00107">
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001228">
        <property type="entry name" value="IspD"/>
    </dbReference>
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        <property type="entry name" value="IspD/F"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034683">
        <property type="entry name" value="IspD/TarI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018294">
        <property type="entry name" value="ISPD_synthase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003526">
        <property type="entry name" value="MECDP_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020555">
        <property type="entry name" value="MECDP_synthase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036571">
        <property type="entry name" value="MECDP_synthase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43181">
        <property type="entry name" value="PTHR43181"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01128">
        <property type="entry name" value="IspD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02542">
        <property type="entry name" value="YgbB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69765">
        <property type="entry name" value="SSF69765"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00453">
        <property type="entry name" value="ispD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00151">
        <property type="entry name" value="ispF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01295">
        <property type="entry name" value="ISPD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01350">
        <property type="entry name" value="ISPF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11 14" id="KW-0414">Isoprene biosynthesis</keyword>
    <keyword evidence="12 14" id="KW-0456">Lyase</keyword>
    <keyword evidence="10 14" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="13 14" id="KW-0511">Multifunctional enzyme</keyword>
    <keyword evidence="9 14" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 14" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="YgbB" evidence="15">
        <location>
            <begin position="256"/>
            <end position="408"/>
        </location>
    </feature>
    <feature type="region of interest" description="2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase" evidence="14">
        <location>
            <begin position="1"/>
            <end position="255"/>
        </location>
    </feature>
    <feature type="region of interest" description="2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase" evidence="14">
        <location>
            <begin position="256"/>
            <end position="416"/>
        </location>
    </feature>
    <feature type="region of interest" description="4-CDP-2-C-methyl-D-erythritol 2-phosphate binding" evidence="14">
        <location>
            <begin position="262"/>
            <end position="264"/>
        </location>
    </feature>
    <feature type="region of interest" description="4-CDP-2-C-methyl-D-erythritol 2-phosphate binding" evidence="14">
        <location>
            <begin position="288"/>
            <end position="289"/>
        </location>
    </feature>
    <feature type="region of interest" description="4-CDP-2-C-methyl-D-erythritol 2-phosphate binding" evidence="14">
        <location>
            <begin position="310"/>
            <end position="312"/>
        </location>
    </feature>
    <feature type="region of interest" description="4-CDP-2-C-methyl-D-erythritol 2-phosphate binding" evidence="14">
        <location>
            <begin position="386"/>
            <end position="389"/>
        </location>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="262"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="264"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="296"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
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    <feature type="binding site" evidence="14">
        <location>
            <position position="393"/>
        </location>
        <ligand>
            <name>4-CDP-2-C-methyl-D-erythritol 2-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:57919"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="396"/>
        </location>
        <ligand>
            <name>4-CDP-2-C-methyl-D-erythritol 2-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:57919"/>
        </ligand>
    </feature>
    <feature type="site" description="Transition state stabilizer" evidence="14">
        <location>
            <position position="16"/>
        </location>
    </feature>
    <feature type="site" description="Transition state stabilizer" evidence="14">
        <location>
            <position position="26"/>
        </location>
    </feature>
    <feature type="site" description="Positions MEP for the nucleophilic attack" evidence="14">
        <location>
            <position position="163"/>
        </location>
    </feature>
    <feature type="site" description="Positions MEP for the nucleophilic attack" evidence="14">
        <location>
            <position position="220"/>
        </location>
    </feature>
    <feature type="site" description="Transition state stabilizer" evidence="14">
        <location>
            <position position="288"/>
        </location>
    </feature>
    <feature type="site" description="Transition state stabilizer" evidence="14">
        <location>
            <position position="387"/>
        </location>
    </feature>
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        <source>
            <dbReference type="ARBA" id="ARBA00000200"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00001282"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00001968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00004709"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00004787"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00008480"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00009789"/>
        </source>
    </evidence>
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        <source>
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        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
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        <source>
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        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023229"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="ARBA" id="ARBA00023268"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01520"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="Pfam" id="PF02542"/>
        </source>
    </evidence>
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        <source>
            <dbReference type="EMBL" id="CTQ64272.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="416" mass="43710" checksum="3DE6A4FC7BCE1EE6" modified="2015-12-09" version="1">MPKTAALVVAAGRGSRMAQDGSTTPKQYRQIADAPILSHTLKALGNHPAISTILTVIHADDGDAYANAVASLPQEVSSRLLPAVAGGKTRQKSVLNGLKALEKAEADFVLIHDAARPFLSADVLDGIIEALEKGQDGVLPAVPVVDTLKRQPQDADRLETVDRSNLHAAQTPQGFPFAKILFAHQAAAAAGHDDFTDDTSLAEWAGFVIALSNGDPANFKITTPADLSRAQSLAKTWTMTASTHPKPSLANLQDVRNGIGYDVHAFEAGSEVVLGGVAIPHTQSLKGHSDADVVLHAITDATLGAIGDGDIGQHFPPSDPKWKGAASDQFQMDAVRRVKDLGGRIAHIDVTIVCEAPKIGPHREAIRASIAAICDIPGSRVSVKATTSEKLGFTGRKEGIAAIASITVRLPLKEDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQ76</accession>
    <name>A0A0M6ZQ76_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">JmjC domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00322</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64507.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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    <dbReference type="EnsemblBacteria" id="CTQ64507">
        <property type="protein sequence ID" value="CTQ64507"/>
        <property type="gene ID" value="LAX5112_00322"/>
    </dbReference>
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        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
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        <property type="entry name" value="JmjC_dom"/>
    </dbReference>
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        <property type="entry name" value="JMJC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="JmjC" evidence="1">
        <location>
            <begin position="105"/>
            <end position="249"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51184"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64507.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="315" mass="36985" checksum="00FADC2308210D6F" modified="2015-12-09" version="1">MNAISQTQDVIANWQDQHSALFDRQNIKLKHRLAETELFSEEALGKLIDKLEPHQYTLNTMGHDKNVKEWRHGEIGSTSGTEVINSIRNGRLWMNVFRIMDIDPQYDRVLNQIFSEFEARVPHLKTTMRNMSLLVSSPKIQVYYHADVQGQSLWQLQGKKRVYVYPVNQAFLTDESLEKILMQETEEEVPYQPWFDEYAEVHDLEPGEMMHWPLYGPHRVENHDCLNISVTTEHWTRDIRHEFAVRYGNGVLRRTLGLKNLSTAPRGFHVYPKAAAALAWKRLKMEKKRQVRRVVDFRLDPTTELGFVDIVPYVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQE2</accession>
    <name>A0A0M6ZQE2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00016</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
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            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
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        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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    <dbReference type="EnsemblBacteria" id="CTQ63643">
        <property type="protein sequence ID" value="CTQ63643"/>
        <property type="gene ID" value="LAX5112_00016"/>
    </dbReference>
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        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809005" evidence="1">
        <location>
            <begin position="28"/>
            <end position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ63643.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="164" mass="18213" checksum="F990BD07B66B139F" modified="2015-12-09" version="1">MRTPIRIRLCTAVVTCCAALSLATANAQDWTYLDDRSTPQKLVESYYYAISNQFYVQAYSYFQKDMAPKDFKSWSEGYADTKSVEVTFGPTEPDPGAGQIYWGLPVALKTTKTDGSTVVFSGCYTIHMANLGMQTEPPFQPMGIVEASLKKTDDPFEKAAPQKC</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQN3</accession>
    <name>A0A0M6ZQN3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">LIV-I protein F</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">livF_1</name>
        <name evidence="6" type="ORF">LAX5112_00071</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63804.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008193515.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
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    <dbReference type="EnsemblBacteria" id="CTQ63804">
        <property type="protein sequence ID" value="CTQ63804"/>
        <property type="gene ID" value="LAX5112_00071"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="29"/>
            <end position="259"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="61"/>
            <end position="68"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ63804.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="259" mass="28623" checksum="08F64E61DC9DEC6B" modified="2015-12-09" version="1">MTILEDQFVGKTAPAVQPKRARGGAPAFFSAWDLHGYYGESYIVQGVNFDVREGEILALLGRNGAGKTSTLRTIARMDDPALTHGEIWLDHKPLHEMKSFQAAQNGVGLVPEDRCIIPGLTVQENLELSQIAEPKGWSIERIYEHFPRLAERRAQDAVTMSGGEQQMLAVARILARDIKLLLLDEPYEGLAPVIVQEIERILEGVKDLGMTTIIVEQNAIAALHLADRAVILDMGEVVFDGTAQEVLDNAELRQEYLAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRE7</accession>
    <name>A0A0M6ZRE7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Tricarballylate dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00414</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64822.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00414"/>
    <dbReference type="EnsemblBacteria" id="CTQ64822">
        <property type="protein sequence ID" value="CTQ64822"/>
        <property type="gene ID" value="LAX5112_00414"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.260">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004792">
        <property type="entry name" value="BaiN-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023166">
        <property type="entry name" value="HI0933-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42887">
        <property type="entry name" value="PTHR42887"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00275">
        <property type="entry name" value="TIGR00275"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ64822.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="427" mass="46378" checksum="BD531F4C71A50128" modified="2015-12-09" version="1">MTKDRRGFGGRKQPHHICLRLKPLFALEIPCISAGMRDLDVLVLGGGAAGLMCAIEAAKRGRQVLVLDHAKRPADKIRISGGGRCNFTNVHCSPANFLSQNPRFCVSALKRYTQQDFLGLVEKHRISWHEKTLGQLFCDNSAKDIIQMLLSELEAAGGVLQLETSISTVSKPDDCFSVATSKGPVRAKSLVIATGGPSIPKMGATGFGYDLARQFGHDVIAPRAALVPLTFSDANKDLCARLSGVSVDAEVSFKKTTFREGLLFTHRGLSGPSILQISSYWEEGRPISVNLLPGTDVFDALRAARSATPKQDLKTGLTQLLPSRLVDELSQAFQLKGRMADLSDKVFRRCSEQLNRWQLTPVGTEGYRTAEVTLGGVNTKELSSKTMESVMVPGLYFIGEVVDVTGHLGGFNFQWAWSSGHAAGQFV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRK9</accession>
    <name>A0A0M6ZRK9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Arginine--tRNA ligase</fullName>
            <ecNumber evidence="9">6.1.1.19</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">Arginyl-tRNA synthetase</fullName>
            <shortName evidence="9">ArgRS</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9 13" type="primary">argS</name>
        <name evidence="13" type="ORF">LAX5112_00165</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 9">
            <text>ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg)</text>
            <dbReference type="Rhea" id="RHEA:20301"/>
            <dbReference type="Rhea" id="RHEA-COMP:9658"/>
            <dbReference type="Rhea" id="RHEA-COMP:9673"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:32682"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78513"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.19"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="9">Monomer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 9 10">Belongs to the class-I aminoacyl-tRNA synthetase family.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.19" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64063.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670180.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00165"/>
    <dbReference type="EnsemblBacteria" id="CTQ64063">
        <property type="protein sequence ID" value="CTQ64063"/>
        <property type="gene ID" value="LAX5112_00165"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004814">
        <property type="term" value="F:arginine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006420">
        <property type="term" value="P:arginyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00671">
        <property type="entry name" value="ArgRS_core"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1360.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00123">
        <property type="entry name" value="Arg_tRNA_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001412">
        <property type="entry name" value="aa-tRNA-synth_I_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001278">
        <property type="entry name" value="Arg-tRNA-ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005148">
        <property type="entry name" value="Arg-tRNA-synth_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036695">
        <property type="entry name" value="Arg-tRNA-synth_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035684">
        <property type="entry name" value="ArgRS_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008909">
        <property type="entry name" value="DALR_anticod-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009080">
        <property type="entry name" value="tRNAsynth_Ia_anticodon-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11956">
        <property type="entry name" value="PTHR11956"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03485">
        <property type="entry name" value="Arg_tRNA_synt_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05746">
        <property type="entry name" value="DALR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00750">
        <property type="entry name" value="tRNA-synt_1d"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01038">
        <property type="entry name" value="TRNASYNTHARG"/>
    </dbReference>
    <dbReference type="SMART" id="SM01016">
        <property type="entry name" value="Arg_tRNA_synt_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00836">
        <property type="entry name" value="DALR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47323">
        <property type="entry name" value="SSF47323"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55190">
        <property type="entry name" value="SSF55190"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00456">
        <property type="entry name" value="argS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00178">
        <property type="entry name" value="AA_TRNA_LIGASE_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 9 10" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="6 9 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 9 10" id="KW-0436">Ligase</keyword>
    <keyword evidence="5 9 10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7 9 10" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Arg_tRNA_synt_N" evidence="12">
        <location>
            <begin position="5"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="domain" description="DALR_1" evidence="11">
        <location>
            <begin position="457"/>
            <end position="588"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="'HIGH' region" evidence="9">
        <location>
            <begin position="131"/>
            <end position="141"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001766"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005594"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU363038"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="SMART" id="SM00836"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="SMART" id="SM01016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="CTQ64063.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="589" mass="64730" checksum="DAD1E089091B3CEC" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRP2</accession>
    <name>A0A0M6ZRP2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Sec-independent protein translocase protein TatB</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8 11" type="primary">tatB</name>
        <name evidence="11" type="ORF">LAX5112_00175</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation.</text>
    </comment>
    <comment type="subunit">
        <text evidence="8">The Tat system comprises two distinct complexes: a TatABC complex, containing multiple copies of TatA, TatB and TatC subunits, and a separate TatA complex, containing only TatA subunits. Substrates initially bind to the TatABC complex, which probably triggers association of the separate TatA complex to form the active translocon.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cell membrane</location>
            <topology evidence="8">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the TatB family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64093.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008189762.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00175"/>
    <dbReference type="EnsemblBacteria" id="CTQ64093">
        <property type="protein sequence ID" value="CTQ64093"/>
        <property type="gene ID" value="LAX5112_00175"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033281">
        <property type="term" value="C:TAT protein transport complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008320">
        <property type="term" value="F:protein transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043953">
        <property type="term" value="P:protein transport by the Tat complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00237">
        <property type="entry name" value="TatB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003369">
        <property type="entry name" value="TatA/B/E"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018448">
        <property type="entry name" value="TatB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02416">
        <property type="entry name" value="TatA_B_E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01410">
        <property type="entry name" value="tatB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 8" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7 8 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="4 8" id="KW-0653">Protein transport</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 8" id="KW-0811">Translocation</keyword>
    <keyword evidence="3 8 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 8 10" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="1 8" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="6"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="75"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="9">
        <location>
            <begin position="82"/>
            <end position="109"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023010"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00237"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ64093.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="139" mass="15269" checksum="3A282A3DD3002547" modified="2015-12-09" version="1">MFDIGWTELLVIACIAIIVVGPKDLPRMLRSLGQNLGKMRRMSREFQSTFNEALREAEQQADIADMKKQVEEAANFNPLGDLKKSIEEDAVKKTTPAKPKEKAETNSTSESEEVEAPAVSPPKPAAADKETPVTEEAKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZT36</accession>
    <name>A0A0M6ZT36_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Putative aldehyde dehydrogenase AldA</fullName>
            <ecNumber evidence="8">1.2.1.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">aldA</name>
        <name evidence="8" type="ORF">LAX5112_00644</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="6">Belongs to the aldehyde dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.2.1.3" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65477.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670596.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ65477">
        <property type="protein sequence ID" value="CTQ65477"/>
        <property type="gene ID" value="LAX5112_00644"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004029">
        <property type="term" value="F:aldehyde dehydrogenase (NAD+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043878">
        <property type="term" value="F:glyceraldehyde-3-phosphate dehydrogenase (NAD+) (non-phosphorylating) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.309.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.605.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016161">
        <property type="entry name" value="Ald_DH/histidinol_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016163">
        <property type="entry name" value="Ald_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016160">
        <property type="entry name" value="Ald_DH_CS_CYS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029510">
        <property type="entry name" value="Ald_DH_CS_GLU"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016162">
        <property type="entry name" value="Ald_DH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015590">
        <property type="entry name" value="Aldehyde_DH_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00171">
        <property type="entry name" value="Aldedh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53720">
        <property type="entry name" value="SSF53720"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00070">
        <property type="entry name" value="ALDEHYDE_DEHYDR_CYS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00687">
        <property type="entry name" value="ALDEHYDE_DEHYDR_GLU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0521">NADP</keyword>
    <keyword evidence="3 6 8" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-0630">Potassium</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aldedh" evidence="7">
        <location>
            <begin position="18"/>
            <end position="479"/>
        </location>
    </feature>
    <feature type="active site" evidence="4">
        <location>
            <position position="253"/>
        </location>
    </feature>
    <feature type="active site" evidence="5">
        <location>
            <position position="287"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022958"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003345"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ65477.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="484" mass="51790" checksum="541C4130BF376CA8" modified="2015-12-09" version="1">MTREIPAYWQNFIDGAFVDGGAGRLDVLDPGTGEKLAEQALADTADVDRAVKAAKKVSDSRTWMDLRPVERGRIVRKMGDYLLDRIDEIAPILTREAGKPLWEAKLEIEGAARYFEYYGNQAETMEGRSIPLGGGYFDFTVHEPFAVSAQIIPWNYPMEMTARSVSAALAVGSAVVVKTPELDPLSNKYFADAALACGLPAGVLNILCGLGQEAGAALSAHADVNQIVFTGSVATGSAIASAAARNVVPCVLELGGKSAAIVYDDADLDAFLSDVRWGIYFNAGQVCSAMSRVIAHEAIHDKLVDGIVGMAEGLKVGPGLEFPEFGNNMGPMISEAQCQRATGMVSEAEREGARIATGGRRMNRPGYFLEPTVLTDVSPDMTIASDEVFGPVLSVLKARDEREALEIANGTPYGLVAGVFTSNVDRAMRASRQLRAGQVFVNEWYAGGVETPFGGFGKSGYGREKGREALLNYVQTKNIAIRIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZT87</accession>
    <name>A0A0M6ZT87_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">L-arabinolactonase</fullName>
            <ecNumber evidence="2">3.1.1.15</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">araB_1</name>
        <name evidence="2" type="ORF">LAX5112_00622</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.1.15" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65436.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00622"/>
    <dbReference type="EnsemblBacteria" id="CTQ65436">
        <property type="protein sequence ID" value="CTQ65436"/>
        <property type="gene ID" value="LAX5112_00622"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050021">
        <property type="term" value="F:L-arabinonolactonase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.120.10.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011042">
        <property type="entry name" value="6-blade_b-propeller_TolB-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013658">
        <property type="entry name" value="SGL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005511">
        <property type="entry name" value="SMP-30"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08450">
        <property type="entry name" value="SGL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01790">
        <property type="entry name" value="SMP30FAMILY"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SGL" evidence="1">
        <location>
            <begin position="23"/>
            <end position="262"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08450"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65436.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="291" mass="32408" checksum="41FFF3853C66F1A3" modified="2015-12-09" version="1">MMLPYQQMGKDMMSIYDQRQCLLGEGPIWHPERQQLFWFDILNKKLLSRKGHEELSWQFPEHVSAAGWISEHALVIASESKLFLFDLETGAEQMLCPLEADNPVTRSNDGRADPYGGFWIGTMGKRAETGAGSIYRYFRGELRQLFSGLTITNSICFSPDGETAYFTDTATGIIQKTALDPYGWPVGEPTVFVDLRNEELNPDGSVVDADGYLWNAQWGAHRVARYAPDGSFIEAIDFPAEQISCPAFGGAELKTLFVTTATEGGLTGDSDGKTFAAETWTRGQAEHRVRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTX0</accession>
    <name>A0A0M6ZTX0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Inner membrane ABC transporter permease protein YcjO</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ycjO</name>
        <name evidence="7" type="ORF">LAX5112_00902</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66188.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670858.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00902"/>
    <dbReference type="EnsemblBacteria" id="CTQ66188">
        <property type="protein sequence ID" value="CTQ66188"/>
        <property type="gene ID" value="LAX5112_00902"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="27"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="203"/>
            <end position="224"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="236"/>
            <end position="256"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="299"/>
            <end position="322"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="346"/>
            <end position="368"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="403"/>
            <end position="425"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="199"/>
            <end position="424"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ66188.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="434" mass="48325" checksum="C050915DEBB0C363" modified="2015-12-09" version="1">MTAQDKTIAERRPPKGIGPMQRREMRLAYLMLAPTFLIILAIVAGPLLANFWISFKPVQLADLRPPSVLVNERMRGNPESAGDVATLEYRMRNSSQDKEIRDVVLRDTLPDGFDVTNVPEVCALQGASITCDIGTVPPKWRERLRFEGTVTAAYLAAARPERASTPEVSGDADNVLTNLDFTFDNFVRIFDADEFWSVLRVTFYYTIFGTAGALVLGLFAAQLLNTTFKGRGFLRGLFLFPYVSPVIAVAFTWVVLFDPFSGTINALLTKMGVVADPINFFGQRAVEFSFFGISMEFPLALSTVIAFEAWRYFPLSFLFILARMQSLNTDIYEAAEMDGATPLQQFWYLSLPQLMGILSVLFLLRFIWTFNKFDDIFLLTGGNAGTRTLTVDVYEQGFALSNLGAGAAVAVVIFVVLVTFATLFLHFSPKEEGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZU36</accession>
    <name>A0A0M6ZU36_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Bacterial regulatory proteins, tetR family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_00688</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65590.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ65590">
        <property type="protein sequence ID" value="CTQ65590"/>
        <property type="gene ID" value="LAX5112_00688"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00440">
        <property type="entry name" value="TetR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50977">
        <property type="entry name" value="HTH_TETR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH tetR-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="1">
        <location>
            <begin position="11"/>
            <end position="30"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ65590.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="177" mass="19705" checksum="09F5E5E40F79A432" modified="2015-12-09" version="1">MLIELGLSKTTTLEVQKRAGVSRGALLHHFPTHADLLSMTISRLIELNENAVWNEAEKLKDIADPLTRSVMTLANAYAHPSFVAELELWIASRADLVLRTALRSAEQDAIADRDRVLTQLFEGLLDQPGAEKAIGLTIEFIRGVTISSLLRNDKSHQNQLIADWIETLRNLLAADRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUG9</accession>
    <name>A0A0M6ZUG9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">HTH-type transcriptional repressor KstR2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">kstR2_1</name>
        <name evidence="6" type="ORF">LAX5112_00793</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65892.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008196957.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00793"/>
    <dbReference type="EnsemblBacteria" id="CTQ65892">
        <property type="protein sequence ID" value="CTQ65892"/>
        <property type="gene ID" value="LAX5112_00793"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041490">
        <property type="entry name" value="KstR2_TetR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036271">
        <property type="entry name" value="Tet_transcr_reg_TetR-rel_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17932">
        <property type="entry name" value="TetR_C_24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00440">
        <property type="entry name" value="TetR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00455">
        <property type="entry name" value="HTHTETR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48498">
        <property type="entry name" value="SSF48498"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50977">
        <property type="entry name" value="HTH_TETR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH tetR-type" evidence="5">
        <location>
            <begin position="10"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="4">
        <location>
            <begin position="33"/>
            <end position="52"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ65892.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="199" mass="22414" checksum="9F81C0A25CB9ED54" modified="2015-12-09" version="1">MARTRANDFEEKQHGLLLTAANVFATQGMEKASMAQIAQEAGVSKSLLYHYYPSKDALIFEIIHSHLAILDKALEEADDPTLPPEDRLQTLVMTVLDSYRGADDQHKVQLNAGPALSDEQKNEIVAIERRIVRHFSNALKDIHPHLDTPDRPLLMPVTMSLFGMMNWVYMWFKEGGPISREDYAKVATTLILEGVKAVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="32" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUI0</accession>
    <name>A0A0M6ZUI0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Acetylglutamate kinase</fullName>
            <ecNumber evidence="8">2.7.2.8</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">N-acetyl-L-glutamate 5-phosphotransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="8">NAG kinase</fullName>
            <shortName evidence="8">NAGK</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8 10" type="primary">argB</name>
        <name evidence="10" type="ORF">LAX5112_00514</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Catalyzes the ATP-dependent phosphorylation of N-acetyl-L-glutamate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 8">
            <text>ATP + N-acetyl-L-glutamate = ADP + N-acetyl-L-glutamyl 5-phosphate</text>
            <dbReference type="Rhea" id="RHEA:14629"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:44337"/>
            <dbReference type="ChEBI" id="CHEBI:57936"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.2.8"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="8">Amino-acid biosynthesis; L-arginine biosynthesis; N(2)-acetyl-L-ornithine from L-glutamate: step 2/4.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the acetylglutamate kinase family. ArgB subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.7.2.8" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65113.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670461.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00514"/>
    <dbReference type="EnsemblBacteria" id="CTQ65113">
        <property type="protein sequence ID" value="CTQ65113"/>
        <property type="gene ID" value="LAX5112_00514"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00068">
        <property type="reaction ID" value="UER00107"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003991">
        <property type="term" value="F:acetylglutamate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042450">
        <property type="term" value="P:arginine biosynthetic process via ornithine"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd04250">
        <property type="entry name" value="AAK_NAGK-C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1160.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00082">
        <property type="entry name" value="ArgB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036393">
        <property type="entry name" value="AceGlu_kinase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004662">
        <property type="entry name" value="AcgluKinase_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037528">
        <property type="entry name" value="ArgB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001048">
        <property type="entry name" value="Asp/Glu/Uridylate_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001057">
        <property type="entry name" value="Glu/AcGlu_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041727">
        <property type="entry name" value="NAGK-C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00696">
        <property type="entry name" value="AA_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000728">
        <property type="entry name" value="NAGK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00474">
        <property type="entry name" value="GLU5KINASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53633">
        <property type="entry name" value="SSF53633"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00761">
        <property type="entry name" value="argB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 8" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="2 8" id="KW-0055">Arginine biosynthesis</keyword>
    <keyword evidence="7 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 8 10" id="KW-0418">Kinase</keyword>
    <keyword evidence="5 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8 10" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="AA_kinase" evidence="9">
        <location>
            <begin position="26"/>
            <end position="272"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="8">
        <location>
            <begin position="66"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="88"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="193"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="site" description="Transition state stabilizer" evidence="8">
        <location>
            <position position="31"/>
        </location>
    </feature>
    <feature type="site" description="Transition state stabilizer" evidence="8">
        <location>
            <position position="253"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022571"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00082"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF00696"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ65113.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="295" mass="31119" checksum="8157AAB56611FB52" modified="2015-12-09" version="1">MTAPETSSRAHIISQALPYMQRYDDKTVVVKYGGHAMGDTDLGQAFARDITLLRQSGVNPVVVHGGGPQIGKMLERLNIVSEFKGGLRVTDKATVEVVEMVLAGAINKEIVQLINAEGGRAVGLCGKDGNLIKARKLKRTVVDPNSNIESVLDLGFVGEPAEVDPTVLKLVLKEDIIPVVAPVAPGDDSETYNINADTCAGAIAGSLNAKRLLFLTDVPGVLDKDGQLIKQLTVAKARELMADGTISGGMIPKVETCIDALERGVEGVVILNGKVPHAVLLELFTDGGAGTLIRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUM8</accession>
    <name>A0A0M6ZUM8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Pseudaminic acid synthase</fullName>
            <ecNumber evidence="2">2.5.1.97</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">pseI</name>
        <name evidence="2" type="ORF">LAX5112_00972</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.5.1.97" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66448.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670887.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00972"/>
    <dbReference type="EnsemblBacteria" id="CTQ66448">
        <property type="protein sequence ID" value="CTQ66448"/>
        <property type="gene ID" value="LAX5112_00972"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016051">
        <property type="term" value="P:carbohydrate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013132">
        <property type="entry name" value="Neu5Ac_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036237">
        <property type="entry name" value="Xyl_isomerase-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03102">
        <property type="entry name" value="NeuB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51658">
        <property type="entry name" value="SSF51658"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="NeuB" evidence="1">
        <location>
            <begin position="21"/>
            <end position="251"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66448.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="607" mass="66618" checksum="8C2F71015FA87CC0" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUZ4</accession>
    <name>A0A0M6ZUZ4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00789</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65880.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ65880">
        <property type="protein sequence ID" value="CTQ65880"/>
        <property type="gene ID" value="LAX5112_00789"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ65880.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="86" mass="9400" checksum="F097274D7F6537A8" modified="2015-12-09" version="1">MPNLLGRHYRMLSAALSVNEKPRSCMRSSVFRDPGSLRSSTTLCAAKPRSASVSNSTHNHQQSVAGAAFTRHVRLCRFADRGSHSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZV12</accession>
    <name>A0A0M6ZV12_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">1,2-phenylacetyl-CoA epoxidase, subunit E</fullName>
            <ecNumber evidence="7">1.-.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">paaE</name>
        <name evidence="7" type="ORF">LAX5112_00796</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.-.-.-" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65900.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670713.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00796"/>
    <dbReference type="EnsemblBacteria" id="CTQ65900">
        <property type="protein sequence ID" value="CTQ65900"/>
        <property type="gene ID" value="LAX5112_00796"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051537">
        <property type="term" value="F:2 iron, 2 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010124">
        <property type="term" value="P:phenylacetate catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00207">
        <property type="entry name" value="fer2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036010">
        <property type="entry name" value="2Fe-2S_ferredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001041">
        <property type="entry name" value="2Fe-2S_ferredoxin-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006058">
        <property type="entry name" value="2Fe2S_fd_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012675">
        <property type="entry name" value="Beta-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008333">
        <property type="entry name" value="Cbr1-like_FAD-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017927">
        <property type="entry name" value="FAD-bd_FR_type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001709">
        <property type="entry name" value="Flavoprot_Pyr_Nucl_cyt_Rdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039261">
        <property type="entry name" value="FNR_nucleotide-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001433">
        <property type="entry name" value="OxRdtase_FAD/NAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011884">
        <property type="entry name" value="PA_CoA_Oase5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017938">
        <property type="entry name" value="Riboflavin_synthase-like_b-brl"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00970">
        <property type="entry name" value="FAD_binding_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00111">
        <property type="entry name" value="Fer2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00175">
        <property type="entry name" value="NAD_binding_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00371">
        <property type="entry name" value="FPNCR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52343">
        <property type="entry name" value="SSF52343"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54292">
        <property type="entry name" value="SSF54292"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63380">
        <property type="entry name" value="SSF63380"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02160">
        <property type="entry name" value="PA_CoA_Oxy5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00197">
        <property type="entry name" value="2FE2S_FER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51085">
        <property type="entry name" value="2FE2S_FER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51384">
        <property type="entry name" value="FAD_FR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0001">2Fe-2S</keyword>
    <keyword evidence="3" id="KW-0408">Iron</keyword>
    <keyword evidence="4" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FAD-binding FR-type" evidence="6">
        <location>
            <begin position="2"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="domain" description="2Fe-2S ferredoxin-type" evidence="5">
        <location>
            <begin position="268"/>
            <end position="358"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022714"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51384"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ65900.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="358" mass="39766" checksum="F36A5C303827E29D" modified="2015-12-09" version="1">MARFHALQVTDIRRDTRDAVVVTLKPEAADQDAFDFIQGQYLTFRRDFDGEELRRSYSICAGKDDGCLKVGIKRVEGGAFSTWANEELKVGDRLDVMPPMGRFFTELEPEKVKSYLGFAGGSGITPVLSIIKTVLAREPKSTFTLIYANRQTSSIMFREELEDLKNTYIGRFSVIHILETETQDIDLFTGRIDAEKMDLLFRLWVDAEEVDTAFICGPEPMMLTIADSLRKHGLSDEQIRFELFASSQPGRAKARTMSQAAAAGAGTCEVSVTLDGSTRNFQMEKNSTSVLEAAIANSMDAPFSCKAGVCSTCRAKVIEGEVEMEVNHALEDYEVRAGYVLSCQCIPVSDKVVISYDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVG2</accession>
    <name>A0A0M6ZVG2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">(R)-specific enoyl-CoA hydratase</fullName>
            <ecNumber evidence="2">4.2.1.119</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">phaJ_1</name>
        <name evidence="2" type="ORF">LAX5112_00917</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="4.2.1.119" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66231.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670801.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00917"/>
    <dbReference type="EnsemblBacteria" id="CTQ66231">
        <property type="protein sequence ID" value="CTQ66231"/>
        <property type="gene ID" value="LAX5112_00917"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029069">
        <property type="entry name" value="HotDog_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002539">
        <property type="entry name" value="MaoC-like_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01575">
        <property type="entry name" value="MaoC_dehydratas"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54637">
        <property type="entry name" value="SSF54637"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MaoC-like" evidence="1">
        <location>
            <begin position="14"/>
            <end position="103"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01575"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66231.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="131" mass="14437" checksum="2CCF1636629C89A7" modified="2015-12-09" version="1">MSLIDKAPVTATFTWTPTQAEFDAFARLSGDDNPIHVDPDFSARTRFGRTVSHGMLLYTRVFGHLQELYPGRAHAVQNLMFPNPSYAGEELTLQFSETAEMPGEIQIEISRTADGAVTLSGSCELTEARDV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVT8</accession>
    <name>A0A0M6ZVT8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">NAD-reducing hydrogenase HoxS subunit alpha</fullName>
            <ecNumber evidence="7">1.12.1.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">hoxF</name>
        <name evidence="7" type="ORF">LAX5112_00895</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the complex I 51 kDa subunit family.</text>
    </comment>
    <dbReference type="EC" id="1.12.1.2" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66170.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670784.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00895"/>
    <dbReference type="EnsemblBacteria" id="CTQ66170">
        <property type="protein sequence ID" value="CTQ66170"/>
        <property type="gene ID" value="LAX5112_00895"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010181">
        <property type="term" value="F:FMN binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047985">
        <property type="term" value="F:hydrogen dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008137">
        <property type="term" value="F:NADH dehydrogenase (ubiquinone) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03064">
        <property type="entry name" value="TRX_Fd_NuoE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.1590">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1440.230">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.11540">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001949">
        <property type="entry name" value="NADH-UbQ_OxRdtase_51kDa_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011538">
        <property type="entry name" value="Nuo51_FMN-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037225">
        <property type="entry name" value="Nuo51_FMN-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042128">
        <property type="entry name" value="NuoE_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041921">
        <property type="entry name" value="NuoE_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019575">
        <property type="entry name" value="Nuop51_4Fe4S-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037207">
        <property type="entry name" value="Nuop51_4Fe4S-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01512">
        <property type="entry name" value="Complex1_51K"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10589">
        <property type="entry name" value="NADH_4Fe-4S"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00928">
        <property type="entry name" value="NADH_4Fe-4S"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF140490">
        <property type="entry name" value="SSF140490"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF142019">
        <property type="entry name" value="SSF142019"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00645">
        <property type="entry name" value="COMPLEX1_51K_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="7" id="KW-0371">Homeobox</keyword>
    <keyword evidence="4" id="KW-0408">Iron</keyword>
    <keyword evidence="5" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NADH_4Fe-4S" evidence="6">
        <location>
            <begin position="503"/>
            <end position="548"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007523"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM00928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ66170.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="626" mass="67935" checksum="6FD566ECCC3FC029" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXX5</accession>
    <name>A0A0M6ZXX5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Phosphoglyceromutase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01190</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67046.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671032.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01190"/>
    <dbReference type="EnsemblBacteria" id="CTQ67046">
        <property type="protein sequence ID" value="CTQ67046"/>
        <property type="gene ID" value="LAX5112_01190"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1240">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013078">
        <property type="entry name" value="His_Pase_superF_clade-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029033">
        <property type="entry name" value="His_PPase_superfam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00300">
        <property type="entry name" value="His_Phos_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53254">
        <property type="entry name" value="SSF53254"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67046.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="234" mass="25624" checksum="5ED43611BF8415C1" modified="2015-12-09" version="1">MTGSAATGPIAVLIRHGDYHQRKNVPSALQPFPLTKQGEAQGKACGEDLSAWLSDEHLTLNPIVYSSCQLRAWQTARLACDVLIKHGHTLTIEQTPSLAERSVGSAANLTLDEIETILTEDPRFDTPPMAWKSDSDYCLPLQGAESLIMAGQRVADHLTRTTAQQPAGTVTLHFGHGASFRHAAHLVGVLTRDQIAQYSMHHARPLHLCHIENGTWAQTGGTWKIRQLTDKTLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZT3</accession>
    <name>A0A0M6ZZT3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01532</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67821.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67821">
        <property type="protein sequence ID" value="CTQ67821"/>
        <property type="gene ID" value="LAX5112_01532"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809212" evidence="1">
        <location>
            <begin position="27"/>
            <end position="122"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67821.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="122" mass="13374" checksum="9EDCCAC8E802FFD1" modified="2015-12-09" version="1">MPNFVSKTRNAGNRLGLIAVCTLAFALSACQIQSPSDILFAPTYNTDRGSIPVVSGTQYDCRTFQGSGWKGFAGGRAANWGEPFPVARTACFKTRDECQAFLTLMSGYIDYQPYFRCQPHTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A070</accession>
    <name>A0A0M7A070_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Methyl-accepting chemotaxis protein 4</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">mcp4_4</name>
        <name evidence="11" type="ORF">LAX5112_01720</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the methyl-accepting chemotaxis (MCP) protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68385.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ68385">
        <property type="protein sequence ID" value="CTQ68385"/>
        <property type="gene ID" value="LAX5112_01720"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004888">
        <property type="term" value="F:transmembrane signaling receptor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006935">
        <property type="term" value="P:chemotaxis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004090">
        <property type="entry name" value="Chemotax_Me-accpt_rcpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004089">
        <property type="entry name" value="MCPsignal_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033480">
        <property type="entry name" value="sCache_2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00015">
        <property type="entry name" value="MCPsignal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17200">
        <property type="entry name" value="sCache_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00260">
        <property type="entry name" value="CHEMTRNSDUCR"/>
    </dbReference>
    <dbReference type="SMART" id="SM01049">
        <property type="entry name" value="Cache_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00283">
        <property type="entry name" value="MA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50111">
        <property type="entry name" value="CHEMOTAXIS_TRANSDUC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0807">Transducer</keyword>
    <keyword evidence="3 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="188"/>
            <end position="210"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="10">
        <location>
            <begin position="211"/>
            <end position="264"/>
        </location>
    </feature>
    <feature type="domain" description="Methyl-accepting transducer" evidence="9">
        <location>
            <begin position="279"/>
            <end position="526"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00029447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ68385.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="560" mass="60059" checksum="D408965647A82C67" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0E1</accession>
    <name>A0A0M7A0E1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Multicopper oxidase mco</fullName>
            <ecNumber evidence="6">1.-.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">mco_1</name>
        <name evidence="6" type="ORF">LAX5112_01622</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.-.-.-" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68067.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01622"/>
    <dbReference type="EnsemblBacteria" id="CTQ68067">
        <property type="protein sequence ID" value="CTQ68067"/>
        <property type="gene ID" value="LAX5112_01622"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005507">
        <property type="term" value="F:copper ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.420">
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001117">
        <property type="entry name" value="Cu-oxidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011706">
        <property type="entry name" value="Cu-oxidase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045087">
        <property type="entry name" value="Cu-oxidase_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011707">
        <property type="entry name" value="Cu-oxidase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033138">
        <property type="entry name" value="Cu_oxidase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002355">
        <property type="entry name" value="Cu_oxidase_Cu_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008972">
        <property type="entry name" value="Cupredoxin"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11709">
        <property type="entry name" value="PTHR11709"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00394">
        <property type="entry name" value="Cu-oxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07731">
        <property type="entry name" value="Cu-oxidase_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07732">
        <property type="entry name" value="Cu-oxidase_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49503">
        <property type="entry name" value="SSF49503"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00079">
        <property type="entry name" value="MULTICOPPER_OXIDASE1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00080">
        <property type="entry name" value="MULTICOPPER_OXIDASE2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2 6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Plastocyanin-like" evidence="5">
        <location>
            <begin position="30"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="domain" description="Plastocyanin-like" evidence="3">
        <location>
            <begin position="145"/>
            <end position="256"/>
        </location>
    </feature>
    <feature type="domain" description="Plastocyanin-like" evidence="4">
        <location>
            <begin position="334"/>
            <end position="442"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00394"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF07731"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF07732"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ68067.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="443" mass="48732" checksum="BB518EE415C0220A" modified="2015-12-09" version="1">MPHFAMAASGDGFIQLEAVKGQGRLYGEDGGLSDLWLYNGKLPGPEIRVKRGERVKVRFKNSLDEPTSVHWHGIRIDNAMDGVSGLTQPAVQPGETFDYDFVAPDAGTYWYHAHHMSWNQVPRGLAGPLIIEEDDNPFSPDADIILSLSDWRLDDNGLLDTASFGARHDFSHAGRLGNWLTINGTSLPDIPVTIGRWHRIRLINTSASRVLDLAPSRFGAKVIALDGQGFDTARDTDGVIQLAPAQRMDLVLKPDSAGPIPFEMMTGQPFTFANFVVSGEKAEPKELRVPAPNSLPEPDLVNARSFPLDMAGGAMGRMQSATMNGQEMSMRELVQAGNFWAFNGQAGMGDKPLFSAKRGETIILESTNNTAFPHAIHLHGHHFRVLERNGEKLAHPDWRDTFTTQRGETVKIALVTDNPGKWLVHCHMLGHAASGMMDWFEVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0E6</accession>
    <name>A0A0M7A0E6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01298</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67264.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67264">
        <property type="protein sequence ID" value="CTQ67264"/>
        <property type="gene ID" value="LAX5112_01298"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67264.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="162" mass="17923" checksum="D4E469F506CFA513" modified="2015-12-09" version="1">MLPLQYLEPLAPEALALMLMLQMLEKPQFAGSLDLRQAGSGRVERRAPLYRLEPQLVTRRATAARSAVSPVRSVSVPCQAIAVVPRRWLETGCPLELRPVLNLLLAPGLTEKQQLVGQKLAPLPPAPRTPALQAVAHWSLAKGSVHRSRKARRPWTVGRIER</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0F4</accession>
    <name>A0A0M7A0F4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Thymidylate synthase</fullName>
            <ecNumber evidence="3">2.1.1.45</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">thyA_1</name>
        <name evidence="3" type="ORF">LAX5112_01626</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.1.1.45" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68077.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671398.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01626"/>
    <dbReference type="EnsemblBacteria" id="CTQ68077">
        <property type="protein sequence ID" value="CTQ68077"/>
        <property type="gene ID" value="LAX5112_01626"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004799">
        <property type="term" value="F:thymidylate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.572.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045097">
        <property type="entry name" value="Thymidate_synth/dCMP_Mease"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023451">
        <property type="entry name" value="Thymidate_synth/dCMP_Mease_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036926">
        <property type="entry name" value="Thymidate_synth/dCMP_Mease_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11548">
        <property type="entry name" value="PTHR11548"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00303">
        <property type="entry name" value="Thymidylat_synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55831">
        <property type="entry name" value="SSF55831"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Thymidylat_synt" evidence="2">
        <location>
            <begin position="1"/>
            <end position="78"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00303"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ68077.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="78" mass="8716" checksum="D125AA143F473EA9" modified="2015-12-09" version="1">MIAQVTGLKPGNCVHTLGDAHLYSNHFDQAREQLTRTPRALPEMKINPAVTDLFAFKYEDFELTGYDPHPHIAAPIAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0I0</accession>
    <name>A0A0M7A0I0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Multidrug transporter MdtA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">mdtA_1</name>
        <name evidence="6" type="ORF">LAX5112_01781</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68548.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01781"/>
    <dbReference type="EnsemblBacteria" id="CTQ68548">
        <property type="protein sequence ID" value="CTQ68548"/>
        <property type="gene ID" value="LAX5112_01781"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032317">
        <property type="entry name" value="HlyD_D23"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006143">
        <property type="entry name" value="RND_pump_MFP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16576">
        <property type="entry name" value="HlyD_D23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01730">
        <property type="entry name" value="RND_mfp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="7"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="domain" description="HlyD_D23" evidence="5">
        <location>
            <begin position="73"/>
            <end position="272"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="354"/>
            <end position="379"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="101"/>
            <end position="171"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF16576"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ68548.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="379" mass="41069" checksum="FA2BDEA9A271D56B" modified="2015-12-09" version="1">MGFFKQLVVLCVLAGLAGGGYWYYQTHMTSAAESSGERSQRGARTVKVEAVPAKETELPVFAEAVGTTRALRAVDIVPLAEGRIVEIDIKSGQEVTAGTVLARLDDEIERATLAEAKARVNERRLAMERAESLRQTNTISQANLEQLRSELAIANAELDRAQRRLADRTIRAPFTGVLGISSIDLGARVETSNVITHLDDLAEVEIEFRLPETVYGQIVQGQPVTATSAAFPGRSFTGNVAAIDSRVDQASRSFRVRARLPNPDRVLPVGMFMRLEIELSIRQAIVVPEEALQVEGGTIFLFVADGDTADRRTVVTGLRRNGFVQISEGVAAGDLVIHRGIQSLRDGSKIEVIDGQPEAQDDASGTPETAAKAQPRQRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A199</accession>
    <name>A0A0M7A199_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01685</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68236.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01685"/>
    <dbReference type="EnsemblBacteria" id="CTQ68236">
        <property type="protein sequence ID" value="CTQ68236"/>
        <property type="gene ID" value="LAX5112_01685"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="141"/>
            <end position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68236.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="164" mass="17288" checksum="2F30EDA91FAD5007" modified="2015-12-09" version="1">MTAQPDTSTLPFSLDRPASKQEAENFCSALSGTMEALLSVIEMETELVRAGKLKEAGELQADKARLIHEYTRGMMSAKDHAVALGNLAPAATQSLRRQHGEFQPVLRINLAVLATAREVTNNIVTSVAKAVGAKNATAPTTYGRTGASPDGPQSAQGIAVNQSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1L9</accession>
    <name>A0A0M7A1L9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Adenylate cyclase 1</fullName>
            <ecNumber evidence="3">4.6.1.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">cyaA_9</name>
        <name evidence="3" type="ORF">LAX5112_01755</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="4.6.1.1" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68481.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01755"/>
    <dbReference type="EnsemblBacteria" id="CTQ68481">
        <property type="protein sequence ID" value="CTQ68481"/>
        <property type="gene ID" value="LAX5112_01755"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004016">
        <property type="term" value="F:adenylate cyclase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009190">
        <property type="term" value="P:cyclic nucleotide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035556">
        <property type="term" value="P:intracellular signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07302">
        <property type="entry name" value="CHD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1230">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001054">
        <property type="entry name" value="A/G_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00211">
        <property type="entry name" value="Guanylate_cyc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00044">
        <property type="entry name" value="CYCc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50125">
        <property type="entry name" value="GUANYLATE_CYCLASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0456">Lyase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Guanylate cyclase" evidence="2">
        <location>
            <begin position="105"/>
            <end position="240"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ68481.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="342" mass="38081" checksum="3D1506D93F998793" modified="2015-12-09" version="1">MEETKSIKSEGRAKAPKQTRSKSGSELQKLRKDNAALRAELDDLTLLYEATIEHSEAIEDQLAGQTAKLEVLSGKLSKYLSPQVYKSIFEGRQEVKIASTRKKLTVFFSDIAEFTETADRLESEELTALLNHYLTEMSNIALKHGATIDKYVGDAILIFFGDPETKGVREDALACVRMAIEMQIRMSELQADWRKAGISKPLKCRMGIHTDYCTVGNFGSGDRLDYTIIGRGVNIASRLESLAAPGAITISFETYSQVKDHIVCRETGDASVKGIAYPITTFEVLREEMQEDFQSADKLMDMSKQLEDLAFELPSEIGSKERESLVSSLKNALARLNEADDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="31" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1W0</accession>
    <name>A0A0M7A1W0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 12">GTP 3',8-cyclase</fullName>
            <ecNumber evidence="3 12">4.1.99.22</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="12">Molybdenum cofactor biosynthesis protein A</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="12 15" type="primary">moaA</name>
        <name evidence="15" type="ORF">LAX5112_01959</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="12">Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8-dihydroguanosine 5'-triphosphate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 12">
            <text>AH2 + GTP + S-adenosyl-L-methionine = (8S)-3',8-cyclo-7,8-dihydroguanosine 5'-triphosphate + 5'-deoxyadenosine + A + H(+) + L-methionine</text>
            <dbReference type="Rhea" id="RHEA:49576"/>
            <dbReference type="ChEBI" id="CHEBI:13193"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17319"/>
            <dbReference type="ChEBI" id="CHEBI:17499"/>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
            <dbReference type="ChEBI" id="CHEBI:57844"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:131766"/>
            <dbReference type="EC" id="4.1.99.22"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="12">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
        <text evidence="12">Binds 2 [4Fe-4S] clusters. Binds 1 [4Fe-4S] cluster coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine and 1 [4Fe-4S] cluster coordinated with 3 cysteines and the GTP-derived substrate.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2 12">Cofactor biosynthesis; molybdopterin biosynthesis.</text>
    </comment>
    <comment type="subunit">
        <text evidence="12">Monomer and homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="12">Belongs to the radical SAM superfamily. MoaA family.</text>
    </comment>
    <dbReference type="EC" id="4.1.99.22" evidence="3 12"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68985.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01959"/>
    <dbReference type="EnsemblBacteria" id="CTQ68985">
        <property type="protein sequence ID" value="CTQ68985"/>
        <property type="gene ID" value="LAX5112_01959"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00344"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019008">
        <property type="term" value="C:molybdopterin synthase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061798">
        <property type="term" value="F:GTP 3',8'-cyclase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:1904047">
        <property type="term" value="F:S-adenosyl-L-methionine binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006777">
        <property type="term" value="P:Mo-molybdopterin cofactor biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01225_B">
        <property type="entry name" value="MoaA_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006638">
        <property type="entry name" value="Elp3/MiaB/NifB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013483">
        <property type="entry name" value="MoaA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000385">
        <property type="entry name" value="MoaA_NifB_PqqE_Fe-S-bd_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010505">
        <property type="entry name" value="Mob_synth_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007197">
        <property type="entry name" value="rSAM"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06463">
        <property type="entry name" value="Mob_synth_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04055">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00029">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00729">
        <property type="entry name" value="Elp3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02666">
        <property type="entry name" value="moaA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01305">
        <property type="entry name" value="MOAA_NIFB_PQQE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51918">
        <property type="entry name" value="RADICAL_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="12" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="9 12" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="7 12" id="KW-0408">Iron</keyword>
    <keyword evidence="8 12" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="11 12 15" id="KW-0456">Lyase</keyword>
    <keyword evidence="5 12" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10 12" id="KW-0501">Molybdenum cofactor biosynthesis</keyword>
    <keyword evidence="6 12" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 12" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <feature type="domain" description="Radical SAM core" evidence="14">
        <location>
            <begin position="26"/>
            <end position="245"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="13">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="35"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="42"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>1</label>
            <note>4Fe-4S-S-AdoMet</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="46"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>1</label>
            <note>4Fe-4S-S-AdoMet</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="48"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="49"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>1</label>
            <note>4Fe-4S-S-AdoMet</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="84"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="88"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="118"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="142"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="178"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="212"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="275"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>2</label>
            <note>4Fe-4S-substrate</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="278"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>2</label>
            <note>4Fe-4S-substrate</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <begin position="280"/>
            <end position="282"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="292"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>2</label>
            <note>4Fe-4S-substrate</note>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005046"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023150"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01225"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS51918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="CTQ68985.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="351" mass="39374" checksum="7C14E5E7E8337A72" modified="2015-12-09" version="1">MTDGNIVVSKPAAPETSARPKPMIDPFGRAVSYLRVSVTDRCDFRCVYCMAEDMTFLPKREVLSLEELDRLCTAFIEKGVRKLRLTGGEPLVRKNIMSLIRSLGRHLDSGAFDELTLTTNGSQLARFAHELYDCGVRRINVSIDTLDPQKFKAVTRWGDLAKVMDGIRVAKEAGLAIKINMVALKQVNEHEIESMMTWCHEHGYDLTMIETMPLGEINEDRTDQYLPLSTVRQRLSEHFTLTDIPYKTGGPARYVTVEETGGRLGFITPMTHNFCESCNRVRVTCTGQLYMCLGQDDMADLRAPLRASEGNELLSDAIDEAIGRKPKGHDFVIDRERNQPAVSRHMSVTGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2K0</accession>
    <name>A0A0M7A2K0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Aconitate hydratase</fullName>
            <shortName evidence="9">Aconitase</shortName>
            <ecNumber evidence="9">4.2.1.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">acnA</name>
        <name evidence="12" type="ORF">LAX5112_02053</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Catalyzes the isomerization of citrate to isocitrate via cis-aconitate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>citrate = D-threo-isocitrate</text>
            <dbReference type="Rhea" id="RHEA:10336"/>
            <dbReference type="ChEBI" id="CHEBI:15562"/>
            <dbReference type="ChEBI" id="CHEBI:16947"/>
            <dbReference type="EC" id="4.2.1.3"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <text evidence="9">Binds 1 [4Fe-4S] cluster per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2">Carbohydrate metabolism; tricarboxylic acid cycle; isocitrate from oxaloacetate: step 2/2.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 9">Belongs to the aconitase/IPM isomerase family.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.3" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69275.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671734.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02053"/>
    <dbReference type="EnsemblBacteria" id="CTQ69275">
        <property type="protein sequence ID" value="CTQ69275"/>
        <property type="gene ID" value="LAX5112_02053"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00223">
        <property type="reaction ID" value="UER00718"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003994">
        <property type="term" value="F:aconitate hydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047780">
        <property type="term" value="F:citrate dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006099">
        <property type="term" value="P:tricarboxylic acid cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd01580">
        <property type="entry name" value="AcnA_IRP_Swivel"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.19.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.499.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044137">
        <property type="entry name" value="AcnA_IRP_Swivel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015931">
        <property type="entry name" value="Acnase/IPM_dHydase_lsu_aba_1/3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001030">
        <property type="entry name" value="Acoase/IPM_deHydtase_lsu_aba"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015928">
        <property type="entry name" value="Aconitase/3IPM_dehydase_swvl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006249">
        <property type="entry name" value="Aconitase/IRP2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018136">
        <property type="entry name" value="Aconitase_4Fe-4S_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036008">
        <property type="entry name" value="Aconitase_4Fe-4S_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000573">
        <property type="entry name" value="AconitaseA/IPMdHydase_ssu_swvl"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11670">
        <property type="entry name" value="PTHR11670"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00330">
        <property type="entry name" value="Aconitase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00694">
        <property type="entry name" value="Aconitase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00415">
        <property type="entry name" value="ACONITASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53732">
        <property type="entry name" value="SSF53732"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01341">
        <property type="entry name" value="aconitase_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00450">
        <property type="entry name" value="ACONITASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01244">
        <property type="entry name" value="ACONITASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="5 9" id="KW-0408">Iron</keyword>
    <keyword evidence="6 9" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="7 9 12" id="KW-0456">Lyase</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aconitase" evidence="10">
        <location>
            <begin position="76"/>
            <end position="585"/>
        </location>
    </feature>
    <feature type="domain" description="Aconitase_C" evidence="11">
        <location>
            <begin position="715"/>
            <end position="840"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004717"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007185"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU361275"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF00330"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF00694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ69275.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="914" mass="99617" checksum="B7F14270EF343EC5" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2M9</accession>
    <name>A0A0M7A2M9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Isocitrate dehydrogenase [NADP]</fullName>
            <ecNumber evidence="1">1.1.1.42</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="1">Oxalosuccinate decarboxylase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6" type="primary">icd_1</name>
        <name evidence="6" type="ORF">LAX5112_01594</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>D-threo-isocitrate + NADP(+) = 2-oxoglutarate + CO2 + NADPH</text>
            <dbReference type="Rhea" id="RHEA:19629"/>
            <dbReference type="ChEBI" id="CHEBI:15562"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:16810"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="EC" id="1.1.1.42"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="4">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <cofactor evidence="4">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
        <text evidence="4">Binds 1 Mg(2+) or Mn(2+) ion per subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the monomeric-type IDH family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.42" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67983.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671377.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01594"/>
    <dbReference type="EnsemblBacteria" id="CTQ67983">
        <property type="protein sequence ID" value="CTQ67983"/>
        <property type="gene ID" value="LAX5112_01594"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004450">
        <property type="term" value="F:isocitrate dehydrogenase (NADP+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006097">
        <property type="term" value="P:glyoxylate cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006099">
        <property type="term" value="P:tricarboxylic acid cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004436">
        <property type="entry name" value="Isocitrate_DH_NADP_mono"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36999">
        <property type="entry name" value="PTHR36999"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03971">
        <property type="entry name" value="IDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF009407">
        <property type="entry name" value="IDH_monmr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00178">
        <property type="entry name" value="monomer_idh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0329">Glyoxylate bypass</keyword>
    <keyword evidence="4" id="KW-0460">Magnesium</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="1 5" id="KW-0521">NADP</keyword>
    <keyword evidence="1 6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0816">Tricarboxylic acid cycle</keyword>
    <feature type="region of interest" description="Substrate binding" evidence="3">
        <location>
            <begin position="130"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="80"/>
            <end position="85"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="133"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="143"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="547"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="584"/>
            <end position="585"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="589"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="600"/>
            <end position="602"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="649"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="site" description="Critical for catalysis" evidence="2">
        <location>
            <position position="255"/>
        </location>
    </feature>
    <feature type="site" description="Critical for catalysis" evidence="2">
        <location>
            <position position="420"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRNR" id="PIRNR009407"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR009407-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR009407-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR009407-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR009407-4"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ67983.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="738" mass="79176" checksum="5871406088CD97ED" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A377</accession>
    <name>A0A0M7A377_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Flagellar hook-basal body complex protein FliE</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">fliE</name>
        <name evidence="4" type="ORF">LAX5112_01666</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 3">Bacterial flagellum basal body</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 3">Belongs to the FliE family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68183.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008193822.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01666"/>
    <dbReference type="EnsemblBacteria" id="CTQ68183">
        <property type="protein sequence ID" value="CTQ68183"/>
        <property type="gene ID" value="LAX5112_01666"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009425">
        <property type="term" value="C:bacterial-type flagellum basal body"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003774">
        <property type="term" value="F:cytoskeletal motor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005198">
        <property type="term" value="F:structural molecule activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071973">
        <property type="term" value="P:bacterial-type flagellum-dependent cell motility"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00724">
        <property type="entry name" value="FliE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001624">
        <property type="entry name" value="FliE"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34653">
        <property type="entry name" value="PTHR34653"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02049">
        <property type="entry name" value="FliE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01006">
        <property type="entry name" value="FLGHOOKFLIE"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0975">Bacterial flagellum</keyword>
    <keyword evidence="4" id="KW-0966">Cell projection</keyword>
    <keyword evidence="4" id="KW-0969">Cilium</keyword>
    <keyword evidence="4" id="KW-0282">Flagellum</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009272"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00724"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ68183.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="104" mass="11283" checksum="DE3D6877903EF141" modified="2015-12-09" version="1">MSTMSIANNAYQMAAQLQQQAKAIEDPTPVREQVDFGQMVQSAVENVVDQGRVADAKAVGLIEGKTDVVDVVTAVAEAEVTLETMVAVRDRVISAYEEIMRMPI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3V1</accession>
    <name>A0A0M7A3V1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 8">Diaminopimelate epimerase</fullName>
            <shortName evidence="8">DAP epimerase</shortName>
            <ecNumber evidence="4 8">5.1.1.7</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">PLP-independent amino acid racemase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8 10" type="primary">dapF</name>
        <name evidence="10" type="ORF">LAX5112_02006</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 8">
            <text>(2S,6S)-2,6-diaminoheptanedioate = meso-2,6-diaminoheptanedioate</text>
            <dbReference type="Rhea" id="RHEA:15393"/>
            <dbReference type="ChEBI" id="CHEBI:57609"/>
            <dbReference type="ChEBI" id="CHEBI:57791"/>
            <dbReference type="EC" id="5.1.1.7"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 8">Amino-acid biosynthesis; L-lysine biosynthesis via DAP pathway; DL-2,6-diaminopimelate from LL-2,6-diaminopimelate: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="8">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 8">Belongs to the diaminopimelate epimerase family.</text>
    </comment>
    <dbReference type="EC" id="5.1.1.7" evidence="4 8"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69162.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671703.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02006"/>
    <dbReference type="EnsemblBacteria" id="CTQ69162">
        <property type="protein sequence ID" value="CTQ69162"/>
        <property type="gene ID" value="LAX5112_02006"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00034">
        <property type="reaction ID" value="UER00025"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008837">
        <property type="term" value="F:diaminopimelate epimerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009089">
        <property type="term" value="P:lysine biosynthetic process via diaminopimelate"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00197">
        <property type="entry name" value="DAP_epimerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018510">
        <property type="entry name" value="DAP_epimerase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001653">
        <property type="entry name" value="DAP_epimerase_DapF"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31689">
        <property type="entry name" value="PTHR31689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01678">
        <property type="entry name" value="DAP_epimerase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00652">
        <property type="entry name" value="DapF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01326">
        <property type="entry name" value="DAP_EPIMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 8" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="8" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7 8 10" id="KW-0413">Isomerase</keyword>
    <keyword evidence="6 8" id="KW-0457">Lysine biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Substrate binding" evidence="8">
        <location>
            <begin position="78"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="8">
        <location>
            <begin position="216"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="8">
        <location>
            <begin position="226"/>
            <end position="227"/>
        </location>
    </feature>
    <feature type="active site" evidence="9">
        <location>
            <position position="77"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="8">
        <location>
            <position position="77"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="8">
        <location>
            <position position="225"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="16"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="49"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="68"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="165"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="198"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="site" description="Could be important to modulate the pK values of the two catalytic cysteine residues" evidence="8">
        <location>
            <position position="167"/>
        </location>
    </feature>
    <feature type="site" description="Could be important to modulate the pK values of the two catalytic cysteine residues" evidence="8">
        <location>
            <position position="216"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000599"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005196"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010219"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00013080"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023154"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00197"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ69162.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="303" mass="32941" checksum="0E10C05FD2F3CBE4" modified="2015-12-09" version="1">MASETRPFLKMNGLGNDFVVWDAREKPLRLTKDQIAKLGDREHGIGFDQMITVERSTCGVDAFMRIHNSDGGQVDACGNATRCIGRLLMEESTKELVTIETNAGLLHAFDAAGLRNVTVDMGKPRLNWDQIPLAEEFADTRAIELQIGPIDEPILHTPAVVNMGNPHAIFWVKDVEAYDLARVGPLLERHPVFPEGANISLAHIFDDNQIRVKVWERGAGLTLACGTAACAVGVAAARDDKTGRKTTIHLPGGPIGIEWRESDGHVLMTGLTEVEFEGEVDLETLTWRKTASGDAPLEAGAAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4A4</accession>
    <name>A0A0M7A4A4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">(2R)-3-sulfolactate dehydrogenase (NADP(+))</fullName>
            <ecNumber evidence="2">1.1.1.338</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">comC</name>
        <name evidence="2" type="ORF">LAX5112_02108</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.1.1.338" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69421.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671771.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02108"/>
    <dbReference type="EnsemblBacteria" id="CTQ69421">
        <property type="protein sequence ID" value="CTQ69421"/>
        <property type="gene ID" value="LAX5112_02108"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1530.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1370.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043144">
        <property type="entry name" value="Mal/L-sulf/L-lact_DH-like_ah"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043143">
        <property type="entry name" value="Mal/L-sulf/L-lact_DH-like_NADP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036111">
        <property type="entry name" value="Mal/L-sulfo/L-lacto_DH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003767">
        <property type="entry name" value="Malate/L-lactate_DH-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11091">
        <property type="entry name" value="PTHR11091"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02615">
        <property type="entry name" value="Ldh_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89733">
        <property type="entry name" value="SSF89733"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69421.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="336" mass="34530" checksum="60E3E0F115435404" modified="2015-12-09" version="1">MEATERLSLCNAELLIKSAFLAVGVPDLAAQSVANALVAAEAEGQVGHGFSRVEDYAAQVQSGKIAAAADVIISQKGTSSLLADAGFGFAYPALDAVIEKGSEVALEHGCATMGITRSHHCGALSVQVEKLTNQGLMAIMVANAPAAMAPFGAKDPVFGTNPIAFAAPRPGKDPLVVDLSLSRVARGKVMNARKAGKDIPEGWALDKDGNPTTSAEAALEGTMLPIGEAKGTALALMVEILASVMTGASKSTEASSFFSADGPPPGVGQFLIAMKPMDTEHFAARIDALLSLIETMEGARLPGSRRAAAIAKARAEGIDVPVRYVDAVRKLAEGHA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4K0</accession>
    <name>A0A0M7A4K0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 8">Heme exporter protein C</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">Cytochrome c-type biogenesis protein</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8 10" type="primary">ccmC</name>
        <name evidence="10" type="ORF">LAX5112_02254</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 8">Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cell inner membrane</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 8">Belongs to the CcmC/CycZ/HelC family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69799.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671879.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02254"/>
    <dbReference type="EnsemblBacteria" id="CTQ69799">
        <property type="protein sequence ID" value="CTQ69799"/>
        <property type="gene ID" value="LAX5112_02254"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015232">
        <property type="term" value="F:heme transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017004">
        <property type="term" value="P:cytochrome complex assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002541">
        <property type="entry name" value="Cyt_c_assembly"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003557">
        <property type="entry name" value="Cyt_c_biogenesis_CcmC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045062">
        <property type="entry name" value="Cyt_c_biogenesis_CcsA/CcmC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30071">
        <property type="entry name" value="PTHR30071"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01578">
        <property type="entry name" value="Cytochrom_C_asm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01386">
        <property type="entry name" value="CCMCBIOGNSIS"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01191">
        <property type="entry name" value="ccmC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="8" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8" id="KW-0201">Cytochrome c-type biogenesis</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="8" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="12"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="61"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="94"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="125"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="156"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="199"/>
            <end position="222"/>
        </location>
    </feature>
    <feature type="domain" description="Cytochrom_C_asm" evidence="9">
        <location>
            <begin position="24"/>
            <end position="182"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002442"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00016463"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU364092"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF01578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ69799.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="254" mass="28501" checksum="9BADEC74E995FE3F" modified="2015-12-09" version="1">MAFWDYANPTRFLRFVQVVLPWLTGLCLLLFAVGLYMSFFVAPEDYQQGDTVRIMYIHVPAAWLCMLCYSVMTLSSIGTLVWKHPLADVSAKSAAPIGAAFTFMALVTGSLWGKPMWGTYWVWDARLTSVLVLFIMYLGLMTLWRTMEDPIKAGKAAAVLTLVGALNLPIIKFSVDWWNTLHQPASVMRFDGPTIHPDILWPLLVMAVAFTLMFFVLHLMAMRNEILRRRVRALRMRAASAAQPGPAGAAQPAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4R2</accession>
    <name>A0A0M7A4R2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">LAX5112_02171</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69581.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671818.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02171"/>
    <dbReference type="EnsemblBacteria" id="CTQ69581">
        <property type="protein sequence ID" value="CTQ69581"/>
        <property type="gene ID" value="LAX5112_02171"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.600">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1610">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010621">
        <property type="entry name" value="DUF1214"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037049">
        <property type="entry name" value="DUF1214_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010679">
        <property type="entry name" value="DUF1254"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037050">
        <property type="entry name" value="DUF1254_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06742">
        <property type="entry name" value="DUF1214"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06863">
        <property type="entry name" value="DUF1254"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809090" evidence="2">
        <location>
            <begin position="22"/>
            <end position="521"/>
        </location>
    </feature>
    <feature type="domain" description="DUF1254" evidence="4">
        <location>
            <begin position="105"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="domain" description="DUF1214" evidence="3">
        <location>
            <begin position="399"/>
            <end position="505"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="443"/>
            <end position="468"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF06742"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF06863"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ69581.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="521" mass="57282" checksum="F14D6F1259FD9BD3" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5J1</accession>
    <name>A0A0M7A5J1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Hemolysin A</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">tlyA</name>
        <name evidence="5" type="ORF">LAX5112_02493</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
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    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="3">Belongs to the TlyA family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70395.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02493"/>
    <dbReference type="EnsemblBacteria" id="CTQ70395">
        <property type="protein sequence ID" value="CTQ70395"/>
        <property type="gene ID" value="LAX5112_02493"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
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        <property type="term" value="F:methyltransferase activity"/>
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        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006364">
        <property type="term" value="P:rRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.290.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004538">
        <property type="entry name" value="Haemolysin_A/TlyA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002877">
        <property type="entry name" value="RNA_MeTrfase_FtsJ_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002942">
        <property type="entry name" value="S4_RNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036986">
        <property type="entry name" value="S4_RNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32319:SF0">
        <property type="entry name" value="PTHR32319:SF0"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01728">
        <property type="entry name" value="FtsJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01479">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005578">
        <property type="entry name" value="TlyA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00363">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00478">
        <property type="entry name" value="tly"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0698">rRNA processing</keyword>
    <keyword evidence="2" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <feature type="domain" description="S4" evidence="4">
        <location>
            <begin position="34"/>
            <end position="99"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00029460"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ70395.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="276" mass="29342" checksum="A4FB6C836E8C63AA" modified="2015-12-09" version="1">MLTVSSPRSPGVFEHPVAPFPLWLVCSSFLMSKQRLDQHLVDTGHFPSRARARDAILRGTVSVNGAVCGKPAQKVAADAPISVEDPAAGYVSRAALKLIEGLRAFNVTPVDKICLDIGASTGGFTQVLLQNGATRVHAIDVGHDQLHDKLRRDPRVIAQDGLNARELTQEHLGGDRPKLLVSDVSFISLKLALPPALDLAAPRADGIFLVKPQFEAGKDKIGKGGLVDPEIAEATAKHLQDWLGTVPGWTAGDLIPSPVKGGDGNAEWLLYGKKAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6X6</accession>
    <name>A0A0M7A6X6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">HTH-type transcriptional activator HxlR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">hxlR_1</name>
        <name evidence="2" type="ORF">LAX5112_02394</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70176.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02394"/>
    <dbReference type="EnsemblBacteria" id="CTQ70176">
        <property type="protein sequence ID" value="CTQ70176"/>
        <property type="gene ID" value="LAX5112_02394"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002577">
        <property type="entry name" value="HTH_HxlR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01638">
        <property type="entry name" value="HxlR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51118">
        <property type="entry name" value="HTH_HXLR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH hxlR-type" evidence="1">
        <location>
            <begin position="17"/>
            <end position="115"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51118"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70176.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="134" mass="14890" checksum="7C6CE1908CCE384A" modified="2015-12-09" version="1">MALKMRKNKSPQPPAPCLLTECMQVIAGAWAPNVIWCLRAGPRRFSELRADIPPVSAKVLSARLKELEERDVIVRHVRPTSPPSVEYELTEIGQELIPALEGIVRVGHKLKIRSGYYPSEAEADANLVRALEPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="31" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A773</accession>
    <name>A0A0M7A773_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 9">Quinolinate synthase</fullName>
            <ecNumber evidence="2 9">2.5.1.72</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9 10" type="primary">nadA</name>
        <name evidence="10" type="ORF">LAX5112_02452</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>dihydroxyacetone phosphate + iminosuccinate = H(+) + 2 H2O + phosphate + quinolinate</text>
            <dbReference type="Rhea" id="RHEA:25888"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29959"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57642"/>
            <dbReference type="ChEBI" id="CHEBI:77875"/>
            <dbReference type="EC" id="2.5.1.72"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="9">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
        <text evidence="9">Binds 1 [4Fe-4S] cluster per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="1 9">Cofactor biosynthesis; NAD(+) biosynthesis; quinolinate from iminoaspartate: step 1/1.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the quinolinate synthase family. Type 2 subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.72" evidence="2 9"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70292.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672135.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02452"/>
    <dbReference type="EnsemblBacteria" id="CTQ70292">
        <property type="protein sequence ID" value="CTQ70292"/>
        <property type="gene ID" value="LAX5112_02452"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00253">
        <property type="reaction ID" value="UER00327"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008987">
        <property type="term" value="F:quinolinate synthetase A activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009435">
        <property type="term" value="P:NAD biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10800">
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00568">
        <property type="entry name" value="NadA_type2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003473">
        <property type="entry name" value="NadA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036094">
        <property type="entry name" value="NadA_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023066">
        <property type="entry name" value="Quinolinate_synth_type2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30573">
        <property type="entry name" value="PTHR30573"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02445">
        <property type="entry name" value="NadA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF142754">
        <property type="entry name" value="SSF142754"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00550">
        <property type="entry name" value="nadA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 9" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7 9" id="KW-0408">Iron</keyword>
    <keyword evidence="8 9" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="6 9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4 9" id="KW-0662">Pyridine nucleotide biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 9 10" id="KW-0808">Transferase</keyword>
    <feature type="region of interest" description="Iminoaspartate binding" evidence="9">
        <location>
            <begin position="171"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="region of interest" description="Iminoaspartate binding" evidence="9">
        <location>
            <begin position="256"/>
            <end position="258"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="82"/>
        </location>
        <ligand>
            <name>iminosuccinate</name>
            <dbReference type="ChEBI" id="CHEBI:77875"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="100"/>
        </location>
        <ligand>
            <name>iminosuccinate</name>
            <dbReference type="ChEBI" id="CHEBI:77875"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="145"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="188"/>
        </location>
        <ligand>
            <name>iminosuccinate</name>
            <dbReference type="ChEBI" id="CHEBI:77875"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="230"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="273"/>
        </location>
        <ligand>
            <name>iminosuccinate</name>
            <dbReference type="ChEBI" id="CHEBI:77875"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="316"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012669"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022642"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00568"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ70292.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="360" mass="39613" checksum="7E8D65E5DA62DF05" modified="2015-12-09" version="1">MTIAQTTAPVGTPIKDGLSALDRYGKLNRPDLSYTAEVAEATAPIYQKVKHIIPEIEWPALAPTIHAINELKKERNAVILAHNYMTPDIFHGVADIVGDSLQLAIEATRTDADVIVQCGVHFMAETSKILSPEKTVLIPDMKAGCSLAESITGADVRALRERNPGVPIITYVNTSADVKAECDICCTSSNALQVVESFGVDKVFLIPDKYLAANVGNKTDVEVLTWDGACEVHERFTAQELRDYRKIEPKVKIIAHPECPPEVVAEADFAGSTAHMIDWVKTKQPEKVMMITECSMADNVASETPEVNFIRPCNLCPHMKRITLDKILDTLLEMKDEVVVDPVIADKARVAVERMINLKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7G7</accession>
    <name>A0A0M7A7G7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Long-chain-fatty-acid--CoA ligase</fullName>
            <ecNumber evidence="4">6.2.1.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">fadD_1</name>
        <name evidence="4" type="ORF">LAX5112_02696</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="6.2.1.3" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71038.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672254.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02696"/>
    <dbReference type="EnsemblBacteria" id="CTQ71038">
        <property type="protein sequence ID" value="CTQ71038"/>
        <property type="gene ID" value="LAX5112_02696"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004467">
        <property type="term" value="F:long-chain fatty acid-CoA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12780">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025110">
        <property type="entry name" value="AMP-bd_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045851">
        <property type="entry name" value="AMP-bd_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020845">
        <property type="entry name" value="AMP-binding_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000873">
        <property type="entry name" value="AMP-dep_Synth/Lig"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042099">
        <property type="entry name" value="ANL_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00501">
        <property type="entry name" value="AMP-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13193">
        <property type="entry name" value="AMP-binding_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00455">
        <property type="entry name" value="AMP_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0007">Acetylation</keyword>
    <keyword evidence="4" id="KW-0436">Ligase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AMP-binding" evidence="2">
        <location>
            <begin position="21"/>
            <end position="449"/>
        </location>
    </feature>
    <feature type="domain" description="AMP-binding_C" evidence="3">
        <location>
            <begin position="460"/>
            <end position="534"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022990"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF13193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ71038.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="553" mass="61752" checksum="60316B046E20B29B" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7P2</accession>
    <name>A0A0M7A7P2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Topology modulation protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02642</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70889.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02642"/>
    <dbReference type="EnsemblBacteria" id="CTQ70889">
        <property type="protein sequence ID" value="CTQ70889"/>
        <property type="gene ID" value="LAX5112_02642"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ70889.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="191" mass="21947" checksum="632407EEC37D8D22" modified="2015-12-09" version="1">MLAGTPKLKIAVIGSPGSGKTYLAHLLADALCLPLYSLDSLYFDKNWEEPTWQDWSARHDKLLTRPCWIIEGNNLPTLKNRVAASDIVVLFDLPPWLCCLRILRRWIRYRHDPRPGMPEGCTERLDLPFLMRAWKYRTLYLPFCTETCRQHLPDERIVVIRKKSELPHALKTISSLSGVECSASPQFQSGI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8B5</accession>
    <name>A0A0M7A8B5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Ribosomal protein L11 methyltransferase</fullName>
            <shortName evidence="2">L11 Mtase</shortName>
            <ecNumber evidence="2">2.1.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">prmA_1</name>
        <name evidence="2" type="synonym">prmA</name>
        <name evidence="3" type="ORF">LAX5112_02630</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Methylates ribosomal protein L11.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>L-lysyl-[protein] + 3 S-adenosyl-L-methionine = 3 H(+) + N(6),N(6),N(6)-trimethyl-L-lysyl-[protein] + 3 S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:54192"/>
            <dbReference type="Rhea" id="RHEA-COMP:9752"/>
            <dbReference type="Rhea" id="RHEA-COMP:13826"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29969"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:61961"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the methyltransferase superfamily. PrmA family.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70851.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672206.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02630"/>
    <dbReference type="EnsemblBacteria" id="CTQ70851">
        <property type="protein sequence ID" value="CTQ70851"/>
        <property type="gene ID" value="LAX5112_02630"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008276">
        <property type="term" value="F:protein methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00735">
        <property type="entry name" value="Methyltr_PrmA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004498">
        <property type="entry name" value="Ribosomal_PrmA_MeTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2 3" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="2" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="2 3" id="KW-0808">Transferase</keyword>
    <feature type="binding site" evidence="2">
        <location>
            <position position="136"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="159"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="181"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="228"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00735"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ70851.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="296" mass="32295" checksum="1BDB88C3BB2AA888" modified="2015-12-09" version="1">MKTIRVKITAEELEAKRISEILERAFEDEGNPVTIYEDSSDGKIWSAEILLFGMEPGEAAALVRDRVGADAFAAPLEAEVLPDINWVEKSLEGLKPVRAGRFFVHGSHDRDKVPGGAIGLEIEAALAFGTGHHGTTAGCLEEIDRLLSMREYDSILDLGTGTGVLAIAAALKARQEVLATDIDPIATETALENARLNGARHLVTGFTANGVEDRRFNLYGPFDLVIANILARPLMKMSKSICARMTPTSTLILSGLRIEDGPRILFAYGCQGFVLDRRREKDGWLTLTLVRGRKHA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9D6</accession>
    <name>A0A0M7A9D6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Succinate dehydrogenase hydrophobic membrane anchor subunit</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="16" type="ORF">LAX5112_02837</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="17" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Membrane-anchoring subunit of succinate dehydrogenase (SDH).</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="4">Carbohydrate metabolism; tricarboxylic acid cycle.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Part of an enzyme complex containing four subunits: a flavoprotein, an iron-sulfur protein, plus two membrane-anchoring proteins, SdhC and SdhD.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Membrane</location>
            <topology evidence="3">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71479.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008195546.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02837"/>
    <dbReference type="EnsemblBacteria" id="CTQ71479">
        <property type="protein sequence ID" value="CTQ71479"/>
        <property type="gene ID" value="LAX5112_02837"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00223"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000104">
        <property type="term" value="F:succinate dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006099">
        <property type="term" value="P:tricarboxylic acid cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1300.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034804">
        <property type="entry name" value="SQR/QFR_C/D"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014312">
        <property type="entry name" value="Succ_DH_anchor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000701">
        <property type="entry name" value="SuccDH_FuR_B_TM-su"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01127">
        <property type="entry name" value="Sdh_cyt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81343">
        <property type="entry name" value="SSF81343"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02968">
        <property type="entry name" value="succ_dehyd_anc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="11" id="KW-0249">Electron transport</keyword>
    <keyword evidence="8" id="KW-0349">Heme</keyword>
    <keyword evidence="13" id="KW-0408">Iron</keyword>
    <keyword evidence="14 15" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9 15" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="12 15" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="7" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="29"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="60"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="99"/>
            <end position="121"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001971"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004050"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00005163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00011558"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00019425"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="CTQ71479.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="127" mass="13870" checksum="9BD18B2950275CD1" modified="2015-12-09" version="1">MSDMRTPLGKVLGLGSAKDGTDHFWKQRLTAVANVFLISFFVILVISMQGSSHGDVVETLQNPLVSIILLLVILSGVYHMKLGMQVIIEDYIHGEALKFLTVMANTFFCVFIGFGCIFAVLKIGFGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9E5</accession>
    <name>A0A0M7A9E5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Fatty acid hydroxylase superfamily protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02921</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71765.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02921"/>
    <dbReference type="EnsemblBacteria" id="CTQ71765">
        <property type="protein sequence ID" value="CTQ71765"/>
        <property type="gene ID" value="LAX5112_02921"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008610">
        <property type="term" value="P:lipid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006694">
        <property type="entry name" value="Fatty_acid_hydroxylase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04116">
        <property type="entry name" value="FA_hydroxylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="15"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="54"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="83"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="domain" description="Fatty acid hydroxylase" evidence="2">
        <location>
            <begin position="95"/>
            <end position="232"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF04116"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ71765.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="280" mass="31268" checksum="93B70E93848E5743" modified="2015-12-09" version="1">METAGLLEGLDTNTIRLACFAGIFGLMAAVEFALPKREQPLGRGKRWPTNWALVVLDAALVRLIFPIGGVGLAMLAFDNGWGLFGWLGWSGVAAWLLTFVILDFAVWLQHWASHKVPLFWRIHRMHHADAEVDVSTALRFHPIEILLSFVWKGAVIVALGGPVEAVLVFEIVLNGAALFNHANASLPGWLDRVLRVVIVTPDMHRVHHSVKRRETDSNYGFNLSVWDRIFTTYVPQPEQGHEGMELGLGPELTPKAHSLPFSLAIPFLKYGRRKETSENQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAR2</accession>
    <name>A0A0M7AAR2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02777</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71310.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ71310">
        <property type="protein sequence ID" value="CTQ71310"/>
        <property type="gene ID" value="LAX5112_02777"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="179"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="220"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="247"/>
            <end position="270"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ71310.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="270" mass="29723" checksum="024D6F812485E1A9" modified="2015-12-09" version="1">MRNPDLWHRISECHPDDVEAAFPFSHRLARDNGWTRSFAARVVVEYQRFAYLSQMKAGMVTPSDEVDQAWHLHLTYTRHYWGPFKKALGAALHHMPTKGGPEQALTFRKAYEETLALYRQEFGEPPPDIWPPAHIRFGKAPHFLRINTQDFMVLRRPDWPLLIKTTANRLRRAPAPIQGAAVTLFALLAGTGLALAHGTPAGDTLLEQLRNMAWHWATQHTLWFFVGIIATALVLIALLKKSTKGSGCGSGGCGSDGGSGGGSGCGGCGD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAT9</accession>
    <name>A0A0M7AAT9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="17">Ferredoxin-dependent glutamate synthase 1</fullName>
            <ecNumber evidence="17">1.4.7.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="17" type="primary">gltB_2</name>
        <name evidence="17" type="ORF">LAX5112_03118</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="18" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="18">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>[3Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:21137"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="14">Amino-acid biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the glutamate synthase family.</text>
    </comment>
    <dbReference type="EC" id="1.4.7.1" evidence="17"/>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72265.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672593.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03118"/>
    <dbReference type="EnsemblBacteria" id="CTQ72265">
        <property type="protein sequence ID" value="CTQ72265"/>
        <property type="gene ID" value="LAX5112_03118"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00705"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051538">
        <property type="term" value="F:3 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016041">
        <property type="term" value="F:glutamate synthase (ferredoxin) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006537">
        <property type="term" value="P:glutamate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006541">
        <property type="term" value="P:glutamine metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00982">
        <property type="entry name" value="gltB_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd02808">
        <property type="entry name" value="GltS_FMN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017932">
        <property type="entry name" value="GATase_2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002489">
        <property type="entry name" value="Glu_synth_asu_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036485">
        <property type="entry name" value="Glu_synth_asu_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006982">
        <property type="entry name" value="Glu_synth_centr_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002932">
        <property type="entry name" value="Glu_synthdom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029055">
        <property type="entry name" value="Ntn_hydrolases_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00310">
        <property type="entry name" value="GATase_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04898">
        <property type="entry name" value="Glu_syn_central"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01645">
        <property type="entry name" value="Glu_synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01493">
        <property type="entry name" value="GXGXG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56235">
        <property type="entry name" value="SSF56235"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69336">
        <property type="entry name" value="SSF69336"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51278">
        <property type="entry name" value="GATASE_TYPE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="13" id="KW-0003">3Fe-4S</keyword>
    <keyword evidence="4" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="5" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="6" id="KW-0288">FMN</keyword>
    <keyword evidence="12" id="KW-0314">Glutamate biosynthesis</keyword>
    <keyword evidence="8" id="KW-0315">Glutamine amidotransferase</keyword>
    <keyword evidence="10" id="KW-0408">Iron</keyword>
    <keyword evidence="11" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9 17" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glutamine amidotransferase type-2" evidence="16">
        <location>
            <begin position="49"/>
            <end position="449"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="15">
        <location>
            <begin position="943"/>
            <end position="969"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009716"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023164"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023291"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00029440"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="PROSITE" id="PS51278"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="CTQ72265.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="1577" mass="172754" checksum="D102080EF733C729" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAX1</accession>
    <name>A0A0M7AAX1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Bacterial regulatory proteins, tetR family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02637</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70873.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02637"/>
    <dbReference type="EnsemblBacteria" id="CTQ70873">
        <property type="protein sequence ID" value="CTQ70873"/>
        <property type="gene ID" value="LAX5112_02637"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00440">
        <property type="entry name" value="TetR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50977">
        <property type="entry name" value="HTH_TETR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH tetR-type" evidence="2">
        <location>
            <begin position="14"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="1">
        <location>
            <begin position="37"/>
            <end position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ70873.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="199" mass="22339" checksum="F22CBED3499E91F5" modified="2015-12-09" version="1">MSDGSTRRGRKDDPSLTDRLQSAMMRALAHQGYEPVRLDNLATAAGTSKQAIYRRWSGKQDYALATLQTALFQIPAPSPERTNTARDLYRLIAGYRAALHSDLGKALLQVRAFPEFRSLIFEFEDEIRFHIRQCLIATPFEQDLQAKTTLILGLIWQDLFDLHFGRGGLDDTGLENAIYLLLGLTAPRSSMELSQLPGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AB77</accession>
    <name>A0A0M7AB77_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Chlorophyllide reductase subunit Z</fullName>
            <ecNumber evidence="8">1.3.7.15</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="14">Chlorin reductase subunit Z</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="18" type="primary">chlB_2</name>
        <name evidence="18" type="ORF">LAX5112_02965</name>
    </gene>
    <organism evidence="18 19">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="19" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="19">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Converts chlorophylls (Chl) into bacteriochlorophylls (BChl) by reducing ring B of the tetrapyrrole.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>3-deacetyl-3-(1-hydroxyethyl)bacteriochlorophyllide a + ADP + 2 oxidized [2Fe-2S]-[ferredoxin] + phosphate = 3-devinyl-3-(1-hydroxyethyl)chlorophyllide a + ATP + H(+) + H2O + 2 reduced [2Fe-2S]-[ferredoxin]</text>
            <dbReference type="Rhea" id="RHEA:48948"/>
            <dbReference type="Rhea" id="RHEA-COMP:10000"/>
            <dbReference type="Rhea" id="RHEA-COMP:10001"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33737"/>
            <dbReference type="ChEBI" id="CHEBI:33738"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:90791"/>
            <dbReference type="ChEBI" id="CHEBI:90792"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="1.3.7.15"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>3-deacetyl-3-vinylbacteriochlorophyllide a + ADP + 2 oxidized [2Fe-2S]-[ferredoxin] + phosphate = ATP + chlorophyllide a + H(+) + H2O + 2 reduced [2Fe-2S]-[ferredoxin]</text>
            <dbReference type="Rhea" id="RHEA:37051"/>
            <dbReference type="Rhea" id="RHEA-COMP:10000"/>
            <dbReference type="Rhea" id="RHEA-COMP:10001"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33737"/>
            <dbReference type="ChEBI" id="CHEBI:33738"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:83348"/>
            <dbReference type="ChEBI" id="CHEBI:83373"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="1.3.7.15"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ADP + bacteriochlorophyllide a + 2 oxidized [2Fe-2S]-[ferredoxin] + phosphate = 3-acetyl-3-devinylchlorophyllide a + ATP + H(+) + H2O + 2 reduced [2Fe-2S]-[ferredoxin]</text>
            <dbReference type="Rhea" id="RHEA:48944"/>
            <dbReference type="Rhea" id="RHEA-COMP:10000"/>
            <dbReference type="Rhea" id="RHEA-COMP:10001"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33737"/>
            <dbReference type="ChEBI" id="CHEBI:33738"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:90794"/>
            <dbReference type="ChEBI" id="CHEBI:90795"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="1.3.7.15"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="5">Porphyrin-containing compound metabolism; bacteriochlorophyll biosynthesis.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Chlorophyllide reductase is composed of three subunits; BchX, BchY and BchZ. Forms a heterodimer of one BchY and one BchZ subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the ChlB/BchB/BchZ family.</text>
    </comment>
    <dbReference type="EC" id="1.3.7.15" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71897.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672473.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02965"/>
    <dbReference type="EnsemblBacteria" id="CTQ71897">
        <property type="protein sequence ID" value="CTQ71897"/>
        <property type="gene ID" value="LAX5112_02965"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00669"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016730">
        <property type="term" value="F:oxidoreductase activity, acting on iron-sulfur proteins as donors"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030494">
        <property type="term" value="P:bacteriochlorophyll biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015979">
        <property type="term" value="P:photosynthesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010244">
        <property type="entry name" value="BchZ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013580">
        <property type="entry name" value="LI-POR_suB-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000510">
        <property type="entry name" value="Nase/OxRdtase_comp1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016209">
        <property type="entry name" value="Protochlorophyllide_Rdtase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00148">
        <property type="entry name" value="Oxidored_nitro"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08369">
        <property type="entry name" value="PCP_red"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000163">
        <property type="entry name" value="PCP_ChlB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02014">
        <property type="entry name" value="BchZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="13" id="KW-0077">Bacteriochlorophyll biosynthesis</keyword>
    <keyword evidence="12" id="KW-0149">Chlorophyll biosynthesis</keyword>
    <keyword evidence="11 18" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="10" id="KW-0602">Photosynthesis</keyword>
    <keyword evidence="19" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Oxidored_nitro" evidence="16">
        <location>
            <begin position="12"/>
            <end position="392"/>
        </location>
    </feature>
    <feature type="domain" description="PCP_red" evidence="17">
        <location>
            <begin position="422"/>
            <end position="472"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="15">
        <location>
            <begin position="452"/>
            <end position="481"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000410"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00000965"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00001586"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00003934"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00004800"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00008935"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00011283"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00012326"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00019776"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022531"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023181"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00032447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="Pfam" id="PF00148"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="Pfam" id="PF08369"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="EMBL" id="CTQ71897.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="481" mass="53172" checksum="C684E2C4E70FBB62" modified="2015-12-09" version="1">MLILDHDRAGGYWGSVYAFTAIKGLQVIIDGPVGCENLPVTSVLHYTDALPPHELPIVVSGLAEEELGQLGTEGAMKRARDALDPDLPAVVVTGSIAEMIGGGVTPEGSNIKRFLPRTIDEDQWQSADRALKWLWTEFGPKRVPKPRKRKDGAKPRVNIIGPIYGTYNMPSDLHEVRRLVEGIGAEINMIFPLSSHVEDIRKLADADANICLYREFGRLLCETLERPFLQAPIGIHSTTAFLRKLGEILDLDPEPFIEREKHTTLKPLWDLWRSVTQDFFATANFAVVANETYVRGIQNFLEEEMGLPCAFAVARKAGSKTNNAEVAELTASTPPMVMFGSFNERMYMAEAGARGKFIQLSYPGAIVRRHTGTPVMGYSGACWLIQEVCNALFDMLFEILPMASELDAIEATAAKAHSQMPWHPDAQAALERRVNQEPVLVRISAAKRLREGAEQRARQNKASEVTLDDLEQVSGREGAPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABT8</accession>
    <name>A0A0M7ABT8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Cell cycle response regulator CtrA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ctrA</name>
        <name evidence="5" type="ORF">LAX5112_03228</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72568.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008194123.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03228"/>
    <dbReference type="EnsemblBacteria" id="CTQ72568">
        <property type="protein sequence ID" value="CTQ72568"/>
        <property type="gene ID" value="LAX5112_03228"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00383">
        <property type="entry name" value="trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001867">
        <property type="entry name" value="OmpR/PhoB-type_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039420">
        <property type="entry name" value="WalR-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48111">
        <property type="entry name" value="PTHR48111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00486">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00862">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51755">
        <property type="entry name" value="OMPR_PHOB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="1" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="3">
        <location>
            <begin position="2"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="domain" description="OmpR/PhoB-type" evidence="4">
        <location>
            <begin position="124"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="OmpR/PhoB-type" evidence="2">
        <location>
            <begin position="124"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="1">
        <location>
            <position position="51"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ72568.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="230" mass="25733" checksum="3346D3DB6D5F1968" modified="2015-12-09" version="1">MRVLLIEDDNATAQSIELMLKSENFNVYTTDLGEEGIDLGKLYDYDIIMLDLNLPDMSGYEVLRTLRVSKVKTPILILSGNAGIEDKVRGLGFGADDYMTKPFHKDELVARIHAIVRRSKGHAQSVIVTGDLKVNLDTKTVEVGGQRVHLTGKEYQMLELLSLRKGTTLTKEMFLNHLYGGMDEPELKIIDVFICKLRKKLAAATSGKNYIETVWGRGYVLREPDVEAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACA0</accession>
    <name>A0A0M7ACA0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 7 8">DNA replication and repair protein RecF</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7 11" type="primary">recF</name>
        <name evidence="11" type="ORF">LAX5112_02764</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6 7 8">The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7 8">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 7 8">Belongs to the RecF family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71274.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672320.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02764"/>
    <dbReference type="EnsemblBacteria" id="CTQ71274">
        <property type="protein sequence ID" value="CTQ71274"/>
        <property type="gene ID" value="LAX5112_02764"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003697">
        <property type="term" value="F:single-stranded DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009432">
        <property type="term" value="P:SOS response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1050.90">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00365">
        <property type="entry name" value="RecF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001238">
        <property type="entry name" value="DNA-binding_RecF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018078">
        <property type="entry name" value="DNA-binding_RecF_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003395">
        <property type="entry name" value="RecF/RecN/SMC_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042174">
        <property type="entry name" value="RecF_2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32182:SF0">
        <property type="entry name" value="PTHR32182:SF0"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02463">
        <property type="entry name" value="SMC_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00611">
        <property type="entry name" value="recf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00617">
        <property type="entry name" value="RECF_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00618">
        <property type="entry name" value="RECF_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 7 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7 8" id="KW-0227">DNA damage</keyword>
    <keyword evidence="7 8" id="KW-0234">DNA repair</keyword>
    <keyword evidence="7 8" id="KW-0235">DNA replication</keyword>
    <keyword evidence="7 8" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="9" id="KW-0472">Membrane</keyword>
    <keyword evidence="4 7 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 8" id="KW-0742">SOS response</keyword>
    <keyword evidence="9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="20"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="domain" description="AAA" evidence="10">
        <location>
            <begin position="28"/>
            <end position="372"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="36"/>
            <end position="43"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00020170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00025401"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00365"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU000578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ71274.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="385" mass="41212" checksum="FEE2DD73DB268399" modified="2015-12-09" version="1">MTAPRSARLTRLTLTGFRNYATMGIGLSAGMVAFVGANGAGKTNILEAISFLTAGRGLRRAALTDIARVGGDGTWSVSAKIHLDDIETSLGTGATAGVPGRKVRIDGEDMRSSESLLDYMRVLWLVPSMDGLFIGPGSDRRRFLDRLTLAIDPAHGRRVSDFENALRQRNKLLDQGGSDAYLSALELQVASLGTAVSFARQETVGLLKQMLDGQPIENTTFPQAMLSLEGTFEAETIGMSASDQEDHYQRLLEQGRHRDRAAGRTLTGPHLSDLKVRHAAKDMPAAQSSTGEQKALLIGLVLAHAELTAKVSGMTPVLLLDEVAAHLDPDRRAALFERLDALGGQVFMTGTDASLFNALPVHSEVFEVGNNEARLIQAAGAHKSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACH5</accession>
    <name>A0A0M7ACH5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03072</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72152.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72152">
        <property type="protein sequence ID" value="CTQ72152"/>
        <property type="gene ID" value="LAX5112_03072"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="43"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="83"/>
            <end position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72152.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="241" mass="25570" checksum="305FA47D179249BF" modified="2015-12-09" version="1">MADVISFLEALLPLSLTILIAGGLGGIAAFLTTSKTASTQVRFGITGFAMVGIIAAFTVPLFLSLLQSNILSEVKSGENSEAYLIFGGFCILAGFSAKAFLSTLSDRVINELTNKMADGQERAEVQIQELKDNLAYQLQMKETATADQNSLLSPKLSQTGRSLSDLEKTVLSALGDLAVRTIDGISQDCGISRTQVEDAVAKLIDRKLATHRSPFGTGRRLVSLTEDGLELAARLAASAIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACW1</accession>
    <name>A0A0M7ACW1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Tol-Pal system protein TolQ</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">exbB</name>
        <name evidence="8" type="synonym">tolQ</name>
        <name evidence="10" type="ORF">LAX5112_03193</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.</text>
    </comment>
    <comment type="subunit">
        <text evidence="8">The Tol-Pal system is composed of five core proteins: the inner membrane proteins TolA, TolQ and TolR, the periplasmic protein TolB and the outer membrane protein Pal. They form a network linking the inner and outer membranes and the peptidoglycan layer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cell inner membrane</location>
            <topology evidence="8">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the ExbB/TolQ family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72471.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008192718.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03193"/>
    <dbReference type="EnsemblBacteria" id="CTQ72471">
        <property type="protein sequence ID" value="CTQ72471"/>
        <property type="gene ID" value="LAX5112_03193"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043213">
        <property type="term" value="P:bacteriocin transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007049">
        <property type="term" value="P:cell cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02202">
        <property type="entry name" value="TolQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002898">
        <property type="entry name" value="MotA_ExbB_proton_chnl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014163">
        <property type="entry name" value="Tol-Pal_TolQ"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01618">
        <property type="entry name" value="MotA_ExbB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02796">
        <property type="entry name" value="tolQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="8" id="KW-0132">Cell division</keyword>
    <keyword evidence="4 8" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="3 8" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="20"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="137"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="180"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="domain" description="MotA_ExbB" evidence="9">
        <location>
            <begin position="89"/>
            <end position="217"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010442"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022519"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02202"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF01618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ72471.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="235" mass="25906" checksum="22A6C5FAB2D8FD21" modified="2015-12-09" version="1">METLVETTLAAPKGDLSFYALFWQAHIVVQVVMLGLLAASVWCWAIIVDKIMIFGKTKRQMNRFETVFWSGQSLEELYGTLHNRVNHSMAALFVAAMREWKRSHEGARPAIGSLQQRIDRVMDVTIQREQERLENRLLILATVGSSAPFIGLFGTVWGIMTAFQAIAASESTNLAVVAPGIAEALFATALGLLAAIPAVIAYNKFSSDVGRAVARMEGFADEFSAILSRQIDERV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADE5</accession>
    <name>A0A0M7ADE5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Modulator of FtsH protease HflK</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">hflK_2</name>
        <name evidence="5" type="ORF">LAX5112_03109</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the band 7/mec-2 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72240.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672588.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03109"/>
    <dbReference type="EnsemblBacteria" id="CTQ72240">
        <property type="protein sequence ID" value="CTQ72240"/>
        <property type="gene ID" value="LAX5112_03109"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008233">
        <property type="term" value="F:peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.479.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001107">
        <property type="entry name" value="Band_7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036013">
        <property type="entry name" value="Band_7/SPFH_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032435">
        <property type="entry name" value="Band_7_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001972">
        <property type="entry name" value="Stomatin_HflK_HflKC_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01145">
        <property type="entry name" value="Band_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16200">
        <property type="entry name" value="Band_7_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00721">
        <property type="entry name" value="STOMATIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00244">
        <property type="entry name" value="PHB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF117892">
        <property type="entry name" value="SSF117892"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-0645">Protease</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="6"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="domain" description="PHB" evidence="4">
        <location>
            <begin position="23"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="302"/>
            <end position="328"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="313"/>
            <end position="328"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008164"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ72240.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="328" mass="36133" checksum="3DEF8ECE3CD95ACF" modified="2015-12-09" version="1">MPIAGFDIVLIGVLLLVILVFFAGVKTVPQGYNYTIERFGRYRKTLTPGLNFIIPFIDRIGHKLNMMEQVLDVPSQEVITRDNATVTADGVTFYQVLDAARAAYEVLGLQNAILNLTMTNIRSVMGSMDLDSLLSNRDEINAQILRVVDAAAEPWGIKITRIEIKDINPPRDLVDAMGRQMKAEREKRASILEAEGKRQSEILKAEGEKQSLILEAEGRKESAFRDAEAREREAEAEAKATQMVSEAIANGDVQAINYFVANKYVEAFTALATSRNQKTLILPMEATSLLGSLSGIGEIAKEAFGDRDKPQRSSSGVPVTRTSPGEEQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADP1</accession>
    <name>A0A0M7ADP1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Phosphoserine phosphatase RsbU</fullName>
            <ecNumber evidence="2">3.1.3.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">rsbU_3</name>
        <name evidence="2" type="ORF">LAX5112_03276</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.3.3" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72741.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672705.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03276"/>
    <dbReference type="EnsemblBacteria" id="CTQ72741">
        <property type="protein sequence ID" value="CTQ72741"/>
        <property type="gene ID" value="LAX5112_03276"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0036424">
        <property type="term" value="F:L-phosphoserine phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004722">
        <property type="term" value="F:protein serine/threonine phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00038">
        <property type="entry name" value="CAP_ED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018490">
        <property type="entry name" value="cNMP-bd-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018488">
        <property type="entry name" value="cNMP-bd_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000595">
        <property type="entry name" value="cNMP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036457">
        <property type="entry name" value="PPM-type_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001932">
        <property type="entry name" value="PPM-type_phosphatase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00027">
        <property type="entry name" value="cNMP_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07228">
        <property type="entry name" value="SpoIIE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00100">
        <property type="entry name" value="cNMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00331">
        <property type="entry name" value="PP2C_SIG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51206">
        <property type="entry name" value="SSF51206"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81606">
        <property type="entry name" value="SSF81606"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00889">
        <property type="entry name" value="CNMP_BINDING_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50042">
        <property type="entry name" value="CNMP_BINDING_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cyclic nucleotide-binding" evidence="1">
        <location>
            <begin position="27"/>
            <end position="129"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72741.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="451" mass="48386" checksum="C3D9EE92D4B1C20B" modified="2015-12-09" version="1">MDPSGERFSSASADLGTLVALLKTHDIFASMDEQHLQNIAEACPIEDAAAGTVLFRQGDPGSFAYLLVSGELSVDVDTPHGDVTLAVLTAPDMVGEISVFARSPRTATVRTRSAVQLLRLDRDVVRGLLIDHPDAILTIIGALGNRLQGMNGAIATLTQAAESLGNDAFQPAMLETLKAEAGRLGQFAHVFDKMAREIREKSAQREEMRMAAKVQCSFLPSGIDPGAFGDNFEIAASMTPAKDVGGDFYDYFMVGESKLGFAIGDVCGKGMPAAMFMSVSRMILKTLAREGHPPGTVITRLNDVLADDNPECMFVTLFYGCLDLETGMLSYSSAGHEDVYWLGSCGNCERVESLGPIAGVFENTDYPTRTRQIAPGDGVLLVTDGVTEALNPNGELYGHDRLKRFLETSKNASALDWIETLTAEVSRFAAEAAQSDDITCLAMIFQGSEAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADT1</accession>
    <name>A0A0M7ADT1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">N-acetyltransferase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03496</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73305.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ73305">
        <property type="protein sequence ID" value="CTQ73305"/>
        <property type="gene ID" value="LAX5112_03496"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="12"/>
            <end position="167"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73305.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="177" mass="19297" checksum="C1EF9018C4718005" modified="2015-12-09" version="1">MLQGLRTLPKGLSLRPARPSDAAFVRKLVDDRYTDLKSHPNVSRDQYENLMEMQVIAQSTGYGAAYPNAVYLVIEKNGQRIGSLTLDWGGGSAHVVSLAFIKKAQGKGYGQVIIHALQQACIQSSCPLTVTCWTQNIGLLNYLLTTGFIPEQAEPDAVQVLMRWLPAAPQTDAAPLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEE6</accession>
    <name>A0A0M7AEE6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Glycerol kinase</fullName>
            <ecNumber evidence="5">2.7.1.30</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">ATP:glycerol 3-phosphotransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="5">Glycerokinase</fullName>
            <shortName evidence="5">GK</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5 9" type="primary">glpK</name>
        <name evidence="9" type="ORF">LAX5112_03236</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn-glycerol 3-phosphate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>ATP + glycerol = ADP + H(+) + sn-glycerol 3-phosphate</text>
            <dbReference type="Rhea" id="RHEA:21644"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17754"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:57597"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.1.30"/>
        </reaction>
    </comment>
    <comment type="activity regulation">
        <text evidence="5">Inhibited by fructose 1,6-bisphosphate (FBP).</text>
    </comment>
    <comment type="pathway">
        <text evidence="5">Polyol metabolism; glycerol degradation via glycerol kinase pathway; sn-glycerol 3-phosphate from glycerol: step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 5 6">Belongs to the FGGY kinase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.30" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72590.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672660.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03236"/>
    <dbReference type="EnsemblBacteria" id="CTQ72590">
        <property type="protein sequence ID" value="CTQ72590"/>
        <property type="gene ID" value="LAX5112_03236"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00618">
        <property type="reaction ID" value="UER00672"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004370">
        <property type="term" value="F:glycerol kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019563">
        <property type="term" value="P:glycerol catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006072">
        <property type="term" value="P:glycerol-3-phosphate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00186">
        <property type="entry name" value="Glycerol_kin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000577">
        <property type="entry name" value="Carb_kinase_FGGY"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018485">
        <property type="entry name" value="Carb_kinase_FGGY_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018483">
        <property type="entry name" value="Carb_kinase_FGGY_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018484">
        <property type="entry name" value="Carb_kinase_FGGY_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005999">
        <property type="entry name" value="Glycerol_kin"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02782">
        <property type="entry name" value="FGGY_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00370">
        <property type="entry name" value="FGGY_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000538">
        <property type="entry name" value="GlpK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="SSF53067"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01311">
        <property type="entry name" value="glycerol_kin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00933">
        <property type="entry name" value="FGGY_KINASES_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00445">
        <property type="entry name" value="FGGY_KINASES_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 5" id="KW-0319">Glycerol metabolism</keyword>
    <keyword evidence="5 6 9" id="KW-0418">Kinase</keyword>
    <keyword evidence="2 5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 6 9" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="FGGY_N" evidence="7">
        <location>
            <begin position="5"/>
            <end position="250"/>
        </location>
    </feature>
    <feature type="domain" description="FGGY_C" evidence="8">
        <location>
            <begin position="260"/>
            <end position="447"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="5">
        <location>
            <begin position="82"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="5">
        <location>
            <begin position="243"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="12"/>
            <end position="14"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="12"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="16"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="134"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="265"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="308"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="312"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="327"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="410"/>
            <end position="414"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009156"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022798"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003733"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF02782"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ72590.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="497" mass="54135" checksum="5BE04098A0969C39" modified="2015-12-09" version="1">MAGCVLAIDQGTTSSRAIVFGEDFQPVSVGQQEFPQHFPKSGWVEHSPSDIWTSTLRVCREAMENAPGNGADVAAIGITNQRETTLVWDRKTGEPVYNAIVWQDRRTADFCAKLRAEGLEAKFTAKTGLLLDPYFSGTKIAWILDNVDGVRARAERGELAFGTVDSWLIWHLTEGEVHATDATNASRTLIYNIHDNTWDAELCELLKIPMSLLPDVKDSADDFGVAKADLFGRELPILGVAGDQQAATVGQACFEPGMVKSTYGTGCFALMNTGAKPVASANRMLTTIAYRLNGETTYALEGSIFVAGAAVQWLRDGLGLIENAADSQALAEQADPNQDVYLVPAFVGLGAPYWDADARGAMFGLTRNTGPKEIARSVLQSVGYQTSDLISAMQSDWPDAHSPVLRVDGGMTASDWTMQFLSDILGAPVDRPTVAETTALGAAWLAGSRARIWPGQKEFSAKWKLEKRFEPHLDQDRREQLLAGWKDAVRRTRSSLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEQ4</accession>
    <name>A0A0M7AEQ4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Ubiquinone/menaquinone biosynthesis methyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03363</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72912.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672775.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03363"/>
    <dbReference type="EnsemblBacteria" id="CTQ72912">
        <property type="protein sequence ID" value="CTQ72912"/>
        <property type="gene ID" value="LAX5112_03363"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0830">Ubiquinone</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ72912.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="223" mass="24051" checksum="6D72FF6D1D207094" modified="2015-12-09" version="1">MTTTWTNDMTPSSTFWDKVARKYAKSKIADEAAYQKTLQRVTEHLGPNDKVLELGAGTGSTALLLAGSVKSYLSTDFAPGMMEIAEEKLAAAKTEGNAPEGLSFLAADGFDPSLTTAAGDEGFDAVLAFNFLHLVEGPEALLDRVNGLLKPGGLFISKTVCLKSKAWLFVPMIKVMQLFGKAPYVSMLSTDMVNDMMTKAGFEIIETGLYPAPRSHFVVARKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AET4</accession>
    <name>A0A0M7AET4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">AsmA_2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03531</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73399.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672898.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03531"/>
    <dbReference type="EnsemblBacteria" id="CTQ73399">
        <property type="protein sequence ID" value="CTQ73399"/>
        <property type="gene ID" value="LAX5112_03531"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032712">
        <property type="entry name" value="AsmA_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13502">
        <property type="entry name" value="AsmA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="16"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="domain" description="AsmA_2" evidence="2">
        <location>
            <begin position="896"/>
            <end position="1072"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13502"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ73399.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="1096" mass="116696" checksum="E1419428D9AB9B64" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AF33</accession>
    <name>A0A0M7AF33_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Lipoprotein-releasing system ATP-binding protein LolD</fullName>
            <ecNumber evidence="6">3.6.3.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">lolD_2</name>
        <name evidence="6" type="ORF">LAX5112_03468</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.-" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73231.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672861.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03468"/>
    <dbReference type="EnsemblBacteria" id="CTQ73231">
        <property type="protein sequence ID" value="CTQ73231"/>
        <property type="gene ID" value="LAX5112_03468"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042953">
        <property type="term" value="P:lipoprotein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03255">
        <property type="entry name" value="ABC_MJ0796_LolCDE_FtsE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015854">
        <property type="entry name" value="ABC_transpr_LolD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017911">
        <property type="entry name" value="MacB_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24220:SF654">
        <property type="entry name" value="PTHR24220:SF654"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="18"/>
            <end position="238"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="54"/>
            <end position="61"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ73231.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="238" mass="25640" checksum="9B56040D91506BB3" modified="2015-12-09" version="1">MNQAVDPRRAPGLQPAAIELSGISRAYDEGDHKLHVLNGANLRIEAGEMVALVAPSGTGKSTLLHIAGLLEQPDGGDVYLGGVNCTDLSDDERTAIRRNDIGFVYQFHHLLPEFTAQENIMMPQMIRGLPKKVAADRADELLAYMRLADRGSHRPSELSGGEQQRVAVARAVANAPRILLLDEPTGNLDPNTAYYVFDALSALVRASGVATLFATHNLELAGRMDRAITLADGLVKPL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AF85</accession>
    <name>A0A0M7AF85_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">NADH-quinone oxidoreductase chain 2</fullName>
            <ecNumber evidence="8">1.6.5.11</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">nqo2</name>
        <name evidence="8" type="ORF">LAX5112_03486</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>2Fe-2S cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49601"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the complex I 24 kDa subunit family.</text>
    </comment>
    <dbReference type="EC" id="1.6.5.11" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73281.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672872.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03486"/>
    <dbReference type="EnsemblBacteria" id="CTQ73281">
        <property type="protein sequence ID" value="CTQ73281"/>
        <property type="gene ID" value="LAX5112_03486"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051537">
        <property type="term" value="F:2 iron, 2 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050136">
        <property type="term" value="F:NADH dehydrogenase (quinone) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd03064">
        <property type="entry name" value="TRX_Fd_NuoE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.1590">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002023">
        <property type="entry name" value="NuoE-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042128">
        <property type="entry name" value="NuoE_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041921">
        <property type="entry name" value="NuoE_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01958">
        <property type="entry name" value="nuoE_fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01099">
        <property type="entry name" value="COMPLEX1_24K"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0001">2Fe-2S</keyword>
    <keyword evidence="5" id="KW-0408">Iron</keyword>
    <keyword evidence="6" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="259"/>
            <end position="337"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="262"/>
            <end position="294"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="308"/>
            <end position="337"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001939"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022714"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ73281.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="418" mass="45416" checksum="A4AEE9EBB87B9C3A" modified="2015-12-09" version="1">MAVRRLAAEQPDSFEFTEENLGWAKKLIDRYPAGRQASAVIPLLWRAQEQNDGWVSEPAIRYIADLLDMPNIRVLEVATFYTMFQLQPVGKKAHIQVCGTTPCQLRGSEDLIKICKSRIAKHMHEISEDGMFSWEEVECLGACVNAPMVQIFKDTYEDLTEESFNKLLDDIDAGNDVTPGPQNGRRFSMAEGGQTSLTEIEDDTKGTLPVPHVIDGSEKASHHFAGAAINTGGNDYDGVPTPAEDAVAKVKAAFAAKAEATADAPAEKKAEAPKKDAPKKAAAKTADKVEKAAGKASEPAPVSKAKPEAKVEAAEAVSEKAPETLKQARDGKPDDLKKLKGVGPKLEATLHELGFFHFDQVASWGAEEIAWVDSRLKFKGRIERDGWIEQAKLLASGEATEFSKRVEAGEVASSKSEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFF2</accession>
    <name>A0A0M7AFF2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03444</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73162.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03444"/>
    <dbReference type="EnsemblBacteria" id="CTQ73162">
        <property type="protein sequence ID" value="CTQ73162"/>
        <property type="gene ID" value="LAX5112_03444"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809288" evidence="1">
        <location>
            <begin position="23"/>
            <end position="127"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73162.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="127" mass="13254" checksum="695BB8C9B84E52E1" modified="2015-12-09" version="1">MLTSAVIAAAAALAATAVSATAATKPSAELTEKEVTALKNAWGEGIVNIGQAHTNGGNYRAAAENHIEQFMPTVTGQFSSSQRSPVKISSGETLMRPSPISWAAISPRTMALRSRLTPMSAGSQRVW</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFT2</accession>
    <name>A0A0M7AFT2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03700</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the SDHAF4 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ73938.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673039.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03700"/>
    <dbReference type="EnsemblBacteria" id="CTQ73938">
        <property type="protein sequence ID" value="CTQ73938"/>
        <property type="gene ID" value="LAX5112_03700"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012875">
        <property type="entry name" value="SDHF4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07896">
        <property type="entry name" value="DUF1674"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="49"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005701"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ73938.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="87" mass="9763" checksum="DADC77FBED3589C1" modified="2015-12-09" version="1">MTDTKDTETAQFTATEVPSLKTDVAEAPKREFEDLPPAAQRALKEAEDRRKEIDAKHNAMAPEVDGRGGLEPTRYDDWEIKGLTVDF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AG34</accession>
    <name>A0A0M7AG34_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Succinyl-CoA:(R)-benzylsuccinate CoA-transferase subunit BbsF</fullName>
            <ecNumber evidence="1">2.8.3.15</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">bbsF_2</name>
        <name evidence="1" type="ORF">LAX5112_03591</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.8.3.15" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73597.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672947.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03591"/>
    <dbReference type="EnsemblBacteria" id="CTQ73597">
        <property type="protein sequence ID" value="CTQ73597"/>
        <property type="gene ID" value="LAX5112_03591"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033877">
        <property type="term" value="F:succinyl-CoA:(R)-benzylsuccinate CoA-transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1540.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10540">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003673">
        <property type="entry name" value="CoA-Trfase_fam_III"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044855">
        <property type="entry name" value="CoA-Trfase_III_dom3_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023606">
        <property type="entry name" value="CoA-Trfase_III_dom_1_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02515">
        <property type="entry name" value="CoA_transf_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89796">
        <property type="entry name" value="SSF89796"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ73597.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="423" mass="45548" checksum="1798B7FA95DE6D61" modified="2015-12-09" version="1">MQQTVPSKGALSGLLVLDLSRILAGPTCTQILGDLGAEVIKIERPVRGDDTRGWGPPFLKNADGEETSESAYYLSSNRNKDSVAIDLASEEGQNLIRKLAAKADILVENFKVGDLKRRGLDYETLKAINPKLIYCSISGFGQTGPYSHRPGYDFLIQGMGGIMSLTGFDDEDGGTQTKCGVGIADVMCGMYATVSILAAVHHRHRTGEGQYIDISLLDAQVSWLINQGVAHLVSGEVPGRLGNGHPTIVPYETFPGADGPFILAVGNDSQFQKFCDVAGAPELATDPLFAKNADRVRNRKTLVPKIRRLTIERDAADWIRDLEAAGVPCGPVNDLGQVFTDHQVLAREMKITLPHPVSGAVDLIGSPIKMGKTPVDYRKAPPMLGADTQDVLQRHLELSDSEIAKLAERGILDLGKDTPAKGN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AG82</accession>
    <name>A0A0M7AG82_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">HNH endonuclease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03758</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74098.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040452667.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03758"/>
    <dbReference type="EnsemblBacteria" id="CTQ74098">
        <property type="protein sequence ID" value="CTQ74098"/>
        <property type="gene ID" value="LAX5112_03758"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004519">
        <property type="term" value="F:endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00085">
        <property type="entry name" value="HNHc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002711">
        <property type="entry name" value="HNH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003615">
        <property type="entry name" value="HNH_nuc"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01844">
        <property type="entry name" value="HNH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00507">
        <property type="entry name" value="HNHc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0540">Nuclease</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HNHc" evidence="1">
        <location>
            <begin position="81"/>
            <end position="131"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00507"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74098.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="185" mass="21450" checksum="6C667B8303D5FB5C" modified="2015-12-09" version="1">MTIAVSPGAHPALVLNADYRPLSYYPLSLWSWQDTIKAVFLDRVNIVAEYDAAVRSPSFEFKLPSVVSLKTFVKPSRHPAFTRFNVFLRDKFQCQYCGSKEELTFDHLIPRSKGGLTTWENVITACSPCNLRKSNKSCEQLNMWPMHMPFRPTIQDLHNNGRGFPPNYLHESWMDFLYWDTELDP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGI5</accession>
    <name>A0A0M7AGI5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Cyclic di-GMP phosphodiesterase Gmr</fullName>
            <ecNumber evidence="5">3.1.4.52</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">gmr_11</name>
        <name evidence="5" type="ORF">LAX5112_03505</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.4.52" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73330.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672880.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03505"/>
    <dbReference type="EnsemblBacteria" id="CTQ73330">
        <property type="protein sequence ID" value="CTQ73330"/>
        <property type="gene ID" value="LAX5112_03505"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071111">
        <property type="term" value="F:cyclic-guanylate-specific phosphodiesterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd01948">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01949">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.450">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001633">
        <property type="entry name" value="EAL_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035919">
        <property type="entry name" value="EAL_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000160">
        <property type="entry name" value="GGDEF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00563">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00990">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00052">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00267">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141868">
        <property type="entry name" value="SSF141868"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00254">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50883">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50887">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="30"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="192"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="domain" description="GGDEF" evidence="4">
        <location>
            <begin position="404"/>
            <end position="537"/>
        </location>
    </feature>
    <feature type="domain" description="EAL" evidence="3">
        <location>
            <begin position="546"/>
            <end position="798"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ73330.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="809" mass="89344" checksum="0EA0FA6DF7B458E1" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGM7</accession>
    <name>A0A0M7AGM7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DNA helicase</fullName>
            <ecNumber evidence="2">3.6.4.12</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_03284</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + H2O = ADP + H(+) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="3.6.4.12"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="3.6.4.12" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72754.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672711.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03284"/>
    <dbReference type="EnsemblBacteria" id="CTQ72754">
        <property type="protein sequence ID" value="CTQ72754"/>
        <property type="gene ID" value="LAX5112_03284"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003678">
        <property type="term" value="F:DNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000212">
        <property type="entry name" value="DNA_helicase_UvrD/REP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014016">
        <property type="entry name" value="UvrD-like_ATP-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11070">
        <property type="entry name" value="PTHR11070"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51198">
        <property type="entry name" value="UVRD_HELICASE_ATP_BIND"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 7" id="KW-0347">Helicase</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3 5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="UvrD-like helicase ATP-binding" evidence="6">
        <location>
            <begin position="11"/>
            <end position="327"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="32"/>
            <end position="39"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001665"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012551"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00560"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51198"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ72754.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="627" mass="70031" checksum="272D368129CBF630" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGW3</accession>
    <name>A0A0M7AGW3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Ribosomal-protein-serine acetyltransferase</fullName>
            <ecNumber evidence="2">2.3.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">rimL_2</name>
        <name evidence="2" type="ORF">LAX5112_03613</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.3.1.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73656.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672965.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ73656">
        <property type="protein sequence ID" value="CTQ73656"/>
        <property type="gene ID" value="LAX5112_03613"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13302">
        <property type="entry name" value="Acetyltransf_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="11"/>
            <end position="175"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73656.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="181" mass="20153" checksum="801FB4A674822297" modified="2015-12-09" version="1">MIPSEIRTRRLVLRPPRRDDLNACAALLGDYEVVKMLSRVPYPYDLEGGRAFLDRAAASWKAPEQADELPFHIDHDGQMIGAVSFRKLQETPRIGYWLGQPHWGQGFMSEAVLAALQWLFRTTGHNRVVSEAMKTNAASLAIMKKMGFRQIGESLCDSAAHSGPVPALQTELMCADFTTGH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AH18</accession>
    <name>A0A0M7AH18_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">3-oxoacyl-[acyl-carrier-protein] reductase</fullName>
            <ecNumber evidence="3">1.1.1.100</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">fabG_9</name>
        <name evidence="4" type="ORF">LAX5112_03868</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>a (3R)-hydroxyacyl-[ACP] + NADP(+) = a 3-oxoacyl-[ACP] + H(+) + NADPH</text>
            <dbReference type="Rhea" id="RHEA:17397"/>
            <dbReference type="Rhea" id="RHEA-COMP:9916"/>
            <dbReference type="Rhea" id="RHEA-COMP:9945"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="ChEBI" id="CHEBI:78776"/>
            <dbReference type="ChEBI" id="CHEBI:78827"/>
            <dbReference type="EC" id="1.1.1.100"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3">Lipid metabolism; fatty acid biosynthesis.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">Homotetramer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the short-chain dehydrogenases/reductases (SDR) family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.100" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74455.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673176.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03868"/>
    <dbReference type="EnsemblBacteria" id="CTQ74455">
        <property type="protein sequence ID" value="CTQ74455"/>
        <property type="gene ID" value="LAX5112_03868"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00094"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004316">
        <property type="term" value="F:3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006633">
        <property type="term" value="P:fatty acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011284">
        <property type="entry name" value="3oxo_ACP_reduc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01830">
        <property type="entry name" value="3oxo_ACP_reduc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0275">Fatty acid biosynthesis</keyword>
    <keyword evidence="3" id="KW-0276">Fatty acid metabolism</keyword>
    <keyword evidence="3" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="3" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="2 3" id="KW-0521">NADP</keyword>
    <keyword evidence="3 4" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" description="Proton acceptor" evidence="1">
        <location>
            <position position="152"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="38"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="87"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <begin position="152"/>
            <end position="156"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="185"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRSR" id="PIRSR611284-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR611284-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU366074"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ74455.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="245" mass="25583" checksum="9B89FF80DAFE68E0" modified="2015-12-09" version="1">MFSLEGKNALITGATGGIGESIARALHAQGATVSLSGTRAEKLEALAADLGERAFVTPANLSDREAVMGLLPAAEEKMGSVDILVNNAGITRDNIFMRMKDEEWDQVLEVNLTSGFLLCRAAIKGMMKRRTGRIVGITSVVGVTGNPGQVNYAAAKSGMIGMYKSLAREVASRNITVNCIAPGFIETAMTDALNDKQKDSILTSVPAGRLGTAAEIASAATYLASDEAAYVTGQTLHVNGGMAMI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHQ1</accession>
    <name>A0A0M7AHQ1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Pyridoxal phosphate homeostasis protein</fullName>
            <shortName evidence="1">PLP homeostasis protein</shortName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">LAX5112_03766</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74121.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673087.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03766"/>
    <dbReference type="EnsemblBacteria" id="CTQ74121">
        <property type="protein sequence ID" value="CTQ74121"/>
        <property type="gene ID" value="LAX5112_03766"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02087">
        <property type="entry name" value="PLP_homeostasis"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001608">
        <property type="entry name" value="Ala_racemase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029066">
        <property type="entry name" value="PLP-binding_barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011078">
        <property type="entry name" value="PyrdxlP_homeostasis"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10146">
        <property type="entry name" value="PTHR10146"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01168">
        <property type="entry name" value="Ala_racemase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004848">
        <property type="entry name" value="YBL036c_PLPDEIII"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51419">
        <property type="entry name" value="SSF51419"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00044">
        <property type="entry name" value="TIGR00044"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 2" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ala_racemase_N" evidence="4">
        <location>
            <begin position="28"/>
            <end position="220"/>
        </location>
    </feature>
    <feature type="modified residue" description="N6-(pyridoxal phosphate)lysine" evidence="1 2">
        <location>
            <position position="36"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02087"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR004848-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU004514"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF01168"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ74121.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="223" mass="24147" checksum="36F50BA64BA41AE2" modified="2015-12-09" version="1">MAPVADQLSNVLLDIRKAEAEYGRPEGAVTLIAVSKTFEADAIRPALEAGHRVFGENRVQEAMGKWPELRGSYDGIELHLIGPLQSNKAKEAVATFDVIHTVDRQKIAKALKAEMDKQGRDLPCFIQVNTGEEPQKAGMPPKEVDQFVKECKDTVGLNIVGLMCIPPVDEAPGEHFALLQKIAARNGLSQISMGMSSDYETAVGFGATHVRVGSAIFGSRDYA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIA4</accession>
    <name>A0A0M7AIA4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">EVE domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03985</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74818.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673278.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03985"/>
    <dbReference type="EnsemblBacteria" id="CTQ74818">
        <property type="protein sequence ID" value="CTQ74818"/>
        <property type="gene ID" value="LAX5112_03985"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002740">
        <property type="entry name" value="EVE_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015947">
        <property type="entry name" value="PUA-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01878">
        <property type="entry name" value="EVE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88697">
        <property type="entry name" value="SSF88697"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="EVE" evidence="1">
        <location>
            <begin position="2"/>
            <end position="134"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01878"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74818.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="141" mass="16242" checksum="00F6E8A62A6A225B" modified="2015-12-09" version="1">MQYWLIKSEPDKWSWEQQKAKGDVGEQWDGIRNYQARNNMRAMEIGDKAFFYHSNIGKEVVGVVEVCSDIHPDTTIDDPRWECVDFKAVCDMPKPVTLAQVKAEQRLEKMSLVTSMRLSVQPVTEEEWKIVCEMGGMSKPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKQ0</accession>
    <name>A0A0M7AKQ0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_04243</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75459.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673478.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000021.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04243"/>
    <dbReference type="EnsemblBacteria" id="CTQ75459">
        <property type="protein sequence ID" value="CTQ75459"/>
        <property type="gene ID" value="LAX5112_04243"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0110001">
        <property type="term" value="C:toxin-antitoxin complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004540">
        <property type="term" value="F:ribonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008201">
        <property type="entry name" value="HepT-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01934">
        <property type="entry name" value="DUF86"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0540">Nuclease</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-1277">Toxin-antitoxin system</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022649"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ75459.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="114" mass="13156" checksum="BE7CEBC7C06719CD" modified="2015-12-09" version="1">MREPRHRLEDIQRAILDLRTFVADLDQAAFLKTPHEDRKTFRAVTACLQEIGEAVKALPPEVTTRHTDIPWRLIAGMRDHIAHEYFRVDADIIWATIESGELEALLEAVNEELK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALM3</accession>
    <name>A0A0M7ALM3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Acyl-CoA dehydrogenase fadE12</fullName>
            <ecNumber evidence="9">1.3.99.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">LAX5112_04440</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 5">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the acyl-CoA dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.3.99.-" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ76025.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673688.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000024.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04440"/>
    <dbReference type="EnsemblBacteria" id="CTQ76025">
        <property type="protein sequence ID" value="CTQ76025"/>
        <property type="gene ID" value="LAX5112_04440"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016627">
        <property type="term" value="F:oxidoreductase activity, acting on the CH-CH group of donors"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.540.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006091">
        <property type="entry name" value="Acyl-CoA_Oxase/DH_mid-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046373">
        <property type="entry name" value="Acyl-CoA_Oxase/DH_mid-dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036250">
        <property type="entry name" value="AcylCo_DH-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009075">
        <property type="entry name" value="AcylCo_DH/oxidase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013786">
        <property type="entry name" value="AcylCoA_DH/ox_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037069">
        <property type="entry name" value="AcylCoA_DH/ox_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009100">
        <property type="entry name" value="AcylCoA_DH/oxidase_NM_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00441">
        <property type="entry name" value="Acyl-CoA_dh_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02770">
        <property type="entry name" value="Acyl-CoA_dh_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02771">
        <property type="entry name" value="Acyl-CoA_dh_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47203">
        <property type="entry name" value="SSF47203"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56645">
        <property type="entry name" value="SSF56645"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0274">FAD</keyword>
    <keyword evidence="3 5" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="5 9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Acyl-CoA_dh_N" evidence="8">
        <location>
            <begin position="7"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="domain" description="Acyl-CoA_dh_M" evidence="7">
        <location>
            <begin position="123"/>
            <end position="220"/>
        </location>
    </feature>
    <feature type="domain" description="Acyl-CoA_dh_1" evidence="6">
        <location>
            <begin position="233"/>
            <end position="381"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009347"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU362125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00441"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF02770"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF02771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ76025.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="388" mass="42651" checksum="0E626F8758336E4D" modified="2015-12-09" version="1">MDIQLSPDRTAIQDAIASLCSQFDDAYWLEKDKAGGFPTEFFQALAQAGWLGICIPEAYGGTGLGITEAAIMMRTIAESGAGLSGASAVHMNIFGLSPVVVFGTEEQKRRMLPPVVAGQERTCFAVTEPNTGLNTTHLKTAARRQGDRYVVNGQKVWISTAQVAEKILLLARTTPLDEVEKPTQGLSLFYTDFNRDQISVREIDKMGRKTVDCNELFFEDFEIPAENLIGDEGEGFRAILHGMNPERILIGSEAIGLGHAALRKACAYAKERVVFDRQIGQNQGIQHPLARNWMMLESAWLMALEAARQYDAGLPCGPAANATKYLGSEAGFEACQQAVMTHGGFGYAREYHVERYMREAMIPRLAPVSQQLILCHIAERVLGLPKSY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AM03</accession>
    <name>A0A0M7AM03_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_04495</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000025">
        <property type="protein sequence ID" value="CTQ76168.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673702.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000025.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76168">
        <property type="protein sequence ID" value="CTQ76168"/>
        <property type="gene ID" value="LAX5112_04495"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021471">
        <property type="entry name" value="DUF3124"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11322">
        <property type="entry name" value="DUF3124"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809446" evidence="2">
        <location>
            <begin position="25"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="138"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="141"/>
            <end position="159"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ76168.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="159" mass="16821" checksum="ED584CE41A204B8B" modified="2015-12-09" version="1">MRPTAKLFALALLLNTAPAPVVFALDLTKALGETIYVPAYSRIFSFPDRSELLAATLTVHNVDPQNPLSVTKVDYHGEDGKLLKSILDAPLRLEPLGSASFLVPSNDTTGGVGANFLVEWSADQGALSPLTEAVMVTGPGTPGPSFTSRGRVISRKTSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMW9</accession>
    <name>A0A0M7AMW9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Terminase_6C domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04391</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75871.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04391"/>
    <dbReference type="EnsemblBacteria" id="CTQ75871">
        <property type="protein sequence ID" value="CTQ75871"/>
        <property type="gene ID" value="LAX5112_04391"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035421">
        <property type="entry name" value="Terminase_6C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17289">
        <property type="entry name" value="Terminase_6C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Terminase_6C" evidence="1">
        <location>
            <begin position="260"/>
            <end position="407"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF17289"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75871.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="422" mass="45691" checksum="6BDE136E6477AA5A" modified="2015-12-09" version="1">MLAELPADDLKFLTFDWPVFAHTHQLPPERDWAVWLLMGGRGAGKTRAGAEWIRARALGHGWCEPGFAGRIALVGETYADVREVMVEGVSGLLAVHPGGERPQWTPSRRRLEWPNGVVAQTFSAEDPEALRGPQFDIAWCDELAKWTYAEETFDMLQFGLRLGSKPRQLITTTPRPVPLLKRLMKQAGTAITHAPTKANALFLAPGFLEAVVGRYGGTRLGRQELDGELIEDRPDALWSRDGLEAARVAAAPEDLTRIVIAIDPPVTATAKSDACGIVAAGLGSDGKAYVLADRSRRPAKPADWAEAAIGLWHGLKADCLIAEVNQGGDMVAQVIASADPSVPVKQVRATRGKFSRAEPVAMLYDQGKVHHAGTFPELEDEMADFGPGGLSGRRSPDRLDALVWAVSDLMLGPKAEPKVRGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANF6</accession>
    <name>A0A0M7ANF6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Acid-resistance membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04670</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000028">
        <property type="protein sequence ID" value="CTQ76678.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76678">
        <property type="protein sequence ID" value="CTQ76678"/>
        <property type="gene ID" value="LAX5112_04670"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005325">
        <property type="entry name" value="DUF308_memb"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03729">
        <property type="entry name" value="DUF308"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="21"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="98"/>
            <end position="115"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76678.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="116" mass="11987" checksum="B24869F520556457" modified="2015-12-09" version="1">MKSEEQTYNEIVAVIRENKGLFALCGLGLTIAGIASILFPIFSSFTINYMVGVLLFAGGLMTLLGSFSVLGTGPFFGVFLAGAMEIGIGLFLINNPVLGTAVVTIGAGFVFLVSGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANM1</accession>
    <name>A0A0M7ANM1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative transposase OrfB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04693</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000028">
        <property type="protein sequence ID" value="CTQ76738.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04693"/>
    <dbReference type="EnsemblBacteria" id="CTQ76738">
        <property type="protein sequence ID" value="CTQ76738"/>
        <property type="gene ID" value="LAX5112_04693"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001584">
        <property type="entry name" value="Integrase_cat-core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00665">
        <property type="entry name" value="rve"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13333">
        <property type="entry name" value="rve_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50994">
        <property type="entry name" value="INTEGRASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Integrase catalytic" evidence="1">
        <location>
            <begin position="33"/>
            <end position="193"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50994"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76738.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="200" mass="23384" checksum="C0B7447BD11546A9" modified="2015-12-09" version="1">MRLMRLVPIYQEPRTSTKHPEHKIYPYLLNDLDISRPNQTWCTDITYIPMRRGFLYLVAVMDWHSRKVLSWRLSNTMEAGFCVEALKDALARYGRPEIFNSDQGAQFTSTDFTTVLQDANVKISMDGRGRWIDNRMIERLWRSLKYECVYLNAFQAGSEAREKIGSWISYYNEERPHSSHGRMTSAEVYATQTPDLKIAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANN3</accession>
    <name>A0A0M7ANN3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">4-pyridoxolactonase</fullName>
            <ecNumber evidence="2">3.1.1.27</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04616</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.1.27" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000027">
        <property type="protein sequence ID" value="CTQ76509.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673803.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000027.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04616"/>
    <dbReference type="EnsemblBacteria" id="CTQ76509">
        <property type="protein sequence ID" value="CTQ76509"/>
        <property type="gene ID" value="LAX5112_04616"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047585">
        <property type="term" value="F:4-pyridoxolactonase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.15.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001279">
        <property type="entry name" value="Metallo-B-lactamas"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036866">
        <property type="entry name" value="RibonucZ/Hydroxyglut_hydro"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00753">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00849">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56281">
        <property type="entry name" value="SSF56281"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lactamase_B" evidence="1">
        <location>
            <begin position="37"/>
            <end position="243"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76509.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="310" mass="35292" checksum="D41B587FFEF08CB4" modified="2015-12-09" version="1">MGVAETKIYPINTGWLHGDLGTYIFWKGPAGRKKWQPVFCHYVDTGEHKILIDTGLPDQERASKYHHNCEKRGCLQVHEHLEQNLGVHPDEIDAIVFTHLHWDHVQNMKEFKNARYIAPKAEIEMAYNPLPLYYRTYECGILGIEPAYAGCVFEAVADECEVLPGITMFHTPGHSVGHMAVSVATTAGDIVVCGDAIFEERNLEPNPAEKWRYWVPARFVNSVEGWKSVEELDKRSDYVLPCHDYEANARSDVFPYEGMPLRKRRQVIPGYQFYFGDMPSRAAQKEAAAMKPEDVDAYISGLAKPEDMED</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AP27</accession>
    <name>A0A0M7AP27_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04427</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ75990.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673642.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000024.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04427"/>
    <dbReference type="EnsemblBacteria" id="CTQ75990">
        <property type="protein sequence ID" value="CTQ75990"/>
        <property type="gene ID" value="LAX5112_04427"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024492">
        <property type="entry name" value="DUF2764"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10962">
        <property type="entry name" value="DUF2764"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ75990.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="249" mass="28324" checksum="91A886BDA8CB86E9" modified="2015-12-09" version="1">MSNPHQYIALITGLPHLGKLFSRKEVPISQYRLRQRMAMLEPGHAGLLKEMVEVTAWAGVAHIEDDFEVIQRAREVIRDLAEYPDLQHLVTGRMETRTLIAALRRRRNGQDAAGAIESWGYGRWCSLIKANWADPAFGLGHFMPWVADAHRLIRAEDHIGMERLVLTEVYRQLDHYSIAHEFDFEAVGIYVLRWIIVERWSRYNADQARDRLKTLVAEALNPSGTAAVVQSVSAELFTETSPSLEGVLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APB7</accession>
    <name>A0A0M7APB7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Succinyl-CoA synthetase subunit alpha</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_04459</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ76080.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673664.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000024.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04459"/>
    <dbReference type="EnsemblBacteria" id="CTQ76080">
        <property type="protein sequence ID" value="CTQ76080"/>
        <property type="gene ID" value="LAX5112_04459"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1490.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.261">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011761">
        <property type="entry name" value="ATP-grasp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013815">
        <property type="entry name" value="ATP_grasp_subdomain_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003781">
        <property type="entry name" value="CoA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032875">
        <property type="entry name" value="Succ_CoA_lig_flav_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016102">
        <property type="entry name" value="Succinyl-CoA_synth-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13380">
        <property type="entry name" value="CoA_binding_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13607">
        <property type="entry name" value="Succ_CoA_lig"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00881">
        <property type="entry name" value="CoA_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52210">
        <property type="entry name" value="SSF52210"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50975">
        <property type="entry name" value="ATP_GRASP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ATP-grasp" evidence="2">
        <location>
            <begin position="495"/>
            <end position="531"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00409"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ76080.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="713" mass="74608" checksum="0FED171846DBE0ED" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APQ7</accession>
    <name>A0A0M7APQ7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Sorbitol dehydrogenase</fullName>
            <ecNumber evidence="1">1.1.1.14</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">polS</name>
        <name evidence="1" type="ORF">LAX5112_04590</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.1.1.14" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000026">
        <property type="protein sequence ID" value="CTQ76422.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673775.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000026.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04590"/>
    <dbReference type="EnsemblBacteria" id="CTQ76422">
        <property type="protein sequence ID" value="CTQ76422"/>
        <property type="gene ID" value="LAX5112_04590"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003939">
        <property type="term" value="F:L-iditol 2-dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ76422.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="257" mass="26867" checksum="C03CD09A2EB02F1E" modified="2015-12-09" version="1">MKRLDGKSALITGAARGIGLAFAQAYIAEGAKVAIADIDGARANQTADDLGPAAIAVEMDVTRQDSIDQAVETTVSALGQIDILINNAAIFTAAPIVEIERADFARTLDINVAGTLFTMQAVARHMIERGGGGKIINMASQAGRRGEPLVAVYCATKAAVISLTQSAALNLIEHGINVNAIAPGVVDGEHWDGVDAFFAKYENKAPGQKKREVGEAVPFGRMGTADDLTGMAVFLASSDADYILAQTYNVDGGQWMS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APT2</accession>
    <name>A0A0M7APT2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative metal-sulfur cluster biosynthesis proteins YuaD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yuaD</name>
        <name evidence="2" type="ORF">LAX5112_04362</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75793.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008191785.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000023.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04362"/>
    <dbReference type="EnsemblBacteria" id="CTQ75793">
        <property type="protein sequence ID" value="CTQ75793"/>
        <property type="gene ID" value="LAX5112_04362"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030151">
        <property type="term" value="F:molybdenum ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005302">
        <property type="entry name" value="MoCF_Sase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011037">
        <property type="entry name" value="Pyrv_Knase-like_insert_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50800">
        <property type="entry name" value="SSF50800"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51340">
        <property type="entry name" value="MOSC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MOSC" evidence="1">
        <location>
            <begin position="38"/>
            <end position="195"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51340"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75793.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="205" mass="22646" checksum="E8DB67DF8F613A9F" modified="2015-12-09" version="1">MADQDTCLADTLDVTRKFKIAGHVEGVFGTPVTEDFQTEPVERLDLTFEGVPGDRHAGFTRKSGGREPWYPRGTEMCNERQISILSVEELAIIAERMELPELKSEWIGGNITLSGIPNLSLIPPRTRLEFEGGVVIRVDGDNAPCRFAGSAIDRQFPDRSGLDLLFPQKARRLRGLVGFVEKPGTVAAGEAVTAHIPEQWIYPKT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APW5</accession>
    <name>A0A0M7APW5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative transposase OrfB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04634</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000027">
        <property type="protein sequence ID" value="CTQ76561.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76561">
        <property type="protein sequence ID" value="CTQ76561"/>
        <property type="gene ID" value="LAX5112_04634"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025948">
        <property type="entry name" value="HTH-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001584">
        <property type="entry name" value="Integrase_cat-core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13276">
        <property type="entry name" value="HTH_21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00665">
        <property type="entry name" value="rve"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13333">
        <property type="entry name" value="rve_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50994">
        <property type="entry name" value="INTEGRASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Integrase catalytic" evidence="1">
        <location>
            <begin position="122"/>
            <end position="273"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50994"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76561.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="273" mass="31789" checksum="AC2797E2B0C06EDB" modified="2015-12-09" version="1">MRFAFIAENQGVLPASRLCQIMNVSPRGYRSWRDRPVSDRQRKDLVVLAHIREQFRLSLGSYGRPRMTEELKELGLDIGHRRVGRLMRENAITVKGNKKFKATTDSNHRFNIAPNLLKRDFSADRPNRKWAGDISYVWTREGWLYLAVILDLHSRRVIGWAVSNRLKRDLAIRALNMAIALRRPPKGCIHHTDRGSQYCSHDYQKLLRQHGFQISMSGTGNCFDNAAAETFFKTIKAELLWQKSWACRREAEMAIFEYINGFYNPRRRHSALA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APW6</accession>
    <name>A0A0M7APW6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Carbon monoxide dehydrogenase small chain</fullName>
            <ecNumber evidence="2">1.2.99.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">cutS_2</name>
        <name evidence="2" type="ORF">LAX5112_04313</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.2.99.2" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000022">
        <property type="protein sequence ID" value="CTQ75644.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451219.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000022.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04313"/>
    <dbReference type="EnsemblBacteria" id="CTQ75644">
        <property type="protein sequence ID" value="CTQ75644"/>
        <property type="gene ID" value="LAX5112_04313"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002888">
        <property type="entry name" value="2Fe-2S-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036884">
        <property type="entry name" value="2Fe-2S-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036010">
        <property type="entry name" value="2Fe-2S_ferredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001041">
        <property type="entry name" value="2Fe-2S_ferredoxin-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012675">
        <property type="entry name" value="Beta-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00111">
        <property type="entry name" value="Fer2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01799">
        <property type="entry name" value="Fer2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47741">
        <property type="entry name" value="SSF47741"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54292">
        <property type="entry name" value="SSF54292"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51085">
        <property type="entry name" value="2FE2S_FER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="2Fe-2S ferredoxin-type" evidence="1">
        <location>
            <begin position="2"/>
            <end position="78"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75644.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="163" mass="17051" checksum="9AFF53B7E57150AE" modified="2015-12-09" version="1">MAKVSMVLNGKSVSADVEDRTLLVGFIRDVRGLTGTHVGCDTSQCGACVVHVNGKAVKACTLLAAQADGAEVVTLEGVGSADNLHPVQAAFREHHGLQCGFCTPGMIMSAIDMINRHGAGNLDEKTIRHELEGNICRCTGYQNIVKAIKAASDQMAGMAQAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQ46</accession>
    <name>A0A0M7AQ46_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Thermophilic serine proteinase</fullName>
            <ecNumber evidence="4">3.4.21.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_04338</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase S8 family.</text>
    </comment>
    <dbReference type="EC" id="3.4.21.-" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000022">
        <property type="protein sequence ID" value="CTQ75714.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673555.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000022.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04338"/>
    <dbReference type="EnsemblBacteria" id="CTQ75714">
        <property type="protein sequence ID" value="CTQ75714"/>
        <property type="gene ID" value="LAX5112_04338"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004252">
        <property type="term" value="F:serine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.200">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000209">
        <property type="entry name" value="Peptidase_S8/S53_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036852">
        <property type="entry name" value="Peptidase_S8/S53_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023827">
        <property type="entry name" value="Peptidase_S8_Asp-AS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00082">
        <property type="entry name" value="Peptidase_S8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52743">
        <property type="entry name" value="SSF52743"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00136">
        <property type="entry name" value="SUBTILASE_ASP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidase_S8" evidence="3">
        <location>
            <begin position="186"/>
            <end position="417"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00011073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00082"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ75714.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="436" mass="47314" checksum="9FFCA18F37DC13BA" modified="2015-12-09" version="1">MSSYITKTSWSGKILFILTSFLLGSAETKAEERSSQSAKTVLERAISSVCADTPPTGFSIQNAVPQSWLLNETSIPAPGLPARQDIRLVLPGGDELTVEIRLAGGSPRQIRATYYRNENNALLPSVLAIADGSCVIRSARKIRYADEPWVLMDQLQGDMETLRWTETLQAPWPDGRDPGGSRVVFVDSGLAYDLPLFRDRLARDNDGTPIGYDFWDVDPWPYDGDTSRGAFLPVRHGTAVASVFAREAPNAALVPFRYPRPDMSRMAEIVARAIDNEIRILAMPLGSNSKEDWTEFAEALKNQNILAIVSAGNNGRDIDAQPVYPAALDLDNILTVTSADGFGRLAPGSNWGNTSVDLMVPAENIAVTDFRGAAGVTSGSSYAVPRLAALAARLLEQNPGLTALELKELIVDRAVASPFETDNRVAVGWIPDPDKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AR43</accession>
    <name>A0A0M7AR43_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Crotonobetainyl-CoA:carnitine CoA-transferase</fullName>
            <ecNumber evidence="1">2.8.3.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">caiB</name>
        <name evidence="1" type="ORF">LAX5112_04450</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.8.3.-" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ76054.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673656.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000024.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04450"/>
    <dbReference type="EnsemblBacteria" id="CTQ76054">
        <property type="protein sequence ID" value="CTQ76054"/>
        <property type="gene ID" value="LAX5112_04450"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1540.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10540">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003673">
        <property type="entry name" value="CoA-Trfase_fam_III"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044855">
        <property type="entry name" value="CoA-Trfase_III_dom3_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023606">
        <property type="entry name" value="CoA-Trfase_III_dom_1_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02515">
        <property type="entry name" value="CoA_transf_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89796">
        <property type="entry name" value="SSF89796"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ76054.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="381" mass="41453" checksum="500748FF1B562529" modified="2015-12-09" version="1">MGPLHGVKIVEFAGIGPGPYGCMMLADMGAEILRIDREPTGASDIEGIDEQRKNSVARGRKSITLDLKDPAAVETALKLIEKADAVVEGFRPGVMERLGLGPDVCLGRNPALVYARMTGWGQTGPLAHAAGHDMNYISLSGALWSFGEEGRDPVPPLNLLGDYGGGGMFLAFGIVCALMRALNTGEGDVIDAAISDGTAALMAPVYMWLANNRWQNQRASNRLDGTAPYYGVYKCSDGKWVSIAPIEEKFWQLFLHLLKLDEADIGDRHDTRQWPDIRHRFESIIGAHPRDHWCQLFEGTDICFAPILDLEEAPAHAHNAARETFVERDGIVQPAPAPRFQNAKATLPSRPPLIGEHNESVLQDWGVTGEDAPALRNSSAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AR53</accession>
    <name>A0A0M7AR53_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative enoyl-[acyl-carrier-protein] reductase II</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04769</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000030">
        <property type="protein sequence ID" value="CTQ76991.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673932.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000030.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04769"/>
    <dbReference type="EnsemblBacteria" id="CTQ76991">
        <property type="protein sequence ID" value="CTQ76991"/>
        <property type="gene ID" value="LAX5112_04769"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018580">
        <property type="term" value="F:nitronate monooxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd04730">
        <property type="entry name" value="NPD_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004136">
        <property type="entry name" value="NMO"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03060">
        <property type="entry name" value="NMO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NMO" evidence="1">
        <location>
            <begin position="13"/>
            <end position="269"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03060"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76991.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="328" mass="35020" checksum="B445B6861BD5DA73" modified="2015-12-09" version="1">MLKKRELPKALQNLRLPVVAAPLFIVSCPKLVIAQCKAGVVGSFPALNARDEDGGPVTLEAWLKEITEELDRHNQANPDTPAAPFAVNQIVRKTNERLERDMEICVRWKVPIWITSMGARVDVNEAAHSCGGIALHDVINNTYARKAIEKGADGLIAVCAGAGGHGGPQSPFALIREIREWFEGPILAGGAASTGEALLAARILGADFGYVGSPFVATHEADAADVYKDMMVAGSAEDVITTAVFTGHPATYLRSSITKEGLDPDNLPADWKPSILPDGDDLPKAWRDIWGAGQGINAVKSVGPAAGVVNRLEQEYKAAISRMRAEIC</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AR83</accession>
    <name>A0A0M7AR83_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 5">Xylulose kinase</fullName>
            <shortName evidence="3 5">Xylulokinase</shortName>
            <ecNumber evidence="3 5">2.7.1.17</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">xylB_3</name>
        <name evidence="3 5" type="synonym">xylB</name>
        <name evidence="8" type="ORF">LAX5112_04746</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Catalyzes the phosphorylation of D-xylulose to D-xylulose 5-phosphate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3 5">
            <text>ATP + D-xylulose = ADP + D-xylulose 5-phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:10964"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17140"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:57737"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.1.17"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="3 4">Belongs to the FGGY kinase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.17" evidence="3 5"/>
    <dbReference type="EMBL" id="CXWD01000030">
        <property type="protein sequence ID" value="CTQ76926.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673915.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000030.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04746"/>
    <dbReference type="EnsemblBacteria" id="CTQ76926">
        <property type="protein sequence ID" value="CTQ76926"/>
        <property type="gene ID" value="LAX5112_04746"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004856">
        <property type="term" value="F:xylulokinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042732">
        <property type="term" value="P:D-xylose metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005998">
        <property type="term" value="P:xylulose catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02220">
        <property type="entry name" value="XylB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000577">
        <property type="entry name" value="Carb_kinase_FGGY"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018485">
        <property type="entry name" value="Carb_kinase_FGGY_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018483">
        <property type="entry name" value="Carb_kinase_FGGY_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018484">
        <property type="entry name" value="Carb_kinase_FGGY_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006000">
        <property type="entry name" value="Xylulokinase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02782">
        <property type="entry name" value="FGGY_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00370">
        <property type="entry name" value="FGGY_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000538">
        <property type="entry name" value="GlpK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="SSF53067"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01312">
        <property type="entry name" value="XylB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00933">
        <property type="entry name" value="FGGY_KINASES_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00445">
        <property type="entry name" value="FGGY_KINASES_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 3 5" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="3 4 8" id="KW-0418">Kinase</keyword>
    <keyword evidence="3 5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4 8" id="KW-0808">Transferase</keyword>
    <keyword evidence="1 3 5" id="KW-0859">Xylose metabolism</keyword>
    <feature type="domain" description="FGGY_N" evidence="6">
        <location>
            <begin position="1"/>
            <end position="243"/>
        </location>
    </feature>
    <feature type="domain" description="FGGY_C" evidence="7">
        <location>
            <begin position="253"/>
            <end position="436"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="3">
        <location>
            <begin position="79"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="3">
        <location>
            <position position="236"/>
        </location>
    </feature>
    <feature type="site" description="Important for activity" evidence="3">
        <location>
            <position position="6"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022629"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02220"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003733"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU364073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF02782"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ76926.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="483" mass="50866" checksum="10ED4B32F65CA891" modified="2015-12-09" version="1">MFIGLDIGTSSVKAILLDENQGLVASATAELTVERPHPGWSEQDPESWWTACETVLDSLKQQVPSKMAAVRGIGLSGHMHGATLLDADGKPLRPCILWNDGRSANQCADLESAEPKFLSLGGNRVMPGFTAPKLQWVRENEPEVFAKTDMVLLPKDYVRFKLTGVYAGDMSDSAGTLWMDVAKRDWSDELLAATGLTRQNMPHLVEGSDVSGEVLSDLCARWGFEKAPVVAGGGGDNAASACGVGAVEPGSGFVSLGTSGVLFVTNDRFSPNVENAVHAFCHAVPNTWHQMGVILSATDSLNWLASRLKKAPGELTAALGSAAGPSDVSFLPYLGGERTPHNDVAIRAGFAGISHETGDTELTHAVLDGVAFALKDCLGALTAAGTKVDRLLAVGGGSRSEVWLEIIASLLEVPIDVPVDGDFGASLGAARLGQAAALGSTEGVFGKPALRTTIDPNPTLIPAYADAYQRWQKLYPAFKQAGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AS62</accession>
    <name>A0A0M7AS62_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04859</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000033">
        <property type="protein sequence ID" value="CTQ77282.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674007.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000033.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77282">
        <property type="protein sequence ID" value="CTQ77282"/>
        <property type="gene ID" value="LAX5112_04859"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77282.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="71" mass="7878" checksum="685B0372B9E2DAFB" modified="2015-12-09" version="1">MAKANKTLEEALICVTGFVIGAIAASSFTAMPETTAVEPNRIDWLFDHAEPMYRQTSTEGEQPVFEMELLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="31" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASW9</accession>
    <name>A0A0M7ASW9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Polyamine aminopropyltransferase</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">Putrescine aminopropyltransferase</fullName>
            <shortName evidence="4">PAPT</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="4">Spermidine synthase</fullName>
            <shortName evidence="4">SPDS</shortName>
            <shortName evidence="4">SPDSY</shortName>
            <ecNumber evidence="4">2.5.1.16</ecNumber>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="4 9" type="primary">speE</name>
        <name evidence="9" type="ORF">LAX5112_04973</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4 7">
            <text>putrescine + S-adenosyl 3-(methylsulfanyl)propylamine = H(+) + S-methyl-5'-thioadenosine + spermidine</text>
            <dbReference type="Rhea" id="RHEA:12721"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17509"/>
            <dbReference type="ChEBI" id="CHEBI:57443"/>
            <dbReference type="ChEBI" id="CHEBI:57834"/>
            <dbReference type="ChEBI" id="CHEBI:326268"/>
            <dbReference type="EC" id="2.5.1.16"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="4">Amine and polyamine biosynthesis; spermidine biosynthesis; spermidine from putrescine: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Homodimer or homotetramer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4 6">Belongs to the spermidine/spermine synthase family.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.16" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000037">
        <property type="protein sequence ID" value="CTQ77601.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674110.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000037.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04973"/>
    <dbReference type="EnsemblBacteria" id="CTQ77601">
        <property type="protein sequence ID" value="CTQ77601"/>
        <property type="gene ID" value="LAX5112_04973"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00248">
        <property type="reaction ID" value="UER00314"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004766">
        <property type="term" value="F:spermidine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008295">
        <property type="term" value="P:spermidine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.140.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00198">
        <property type="entry name" value="Spermidine_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030374">
        <property type="entry name" value="PABS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030373">
        <property type="entry name" value="PABS_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001045">
        <property type="entry name" value="Spermi_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035246">
        <property type="entry name" value="Spermidine_synt_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037163">
        <property type="entry name" value="Spermidine_synt_N_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11558">
        <property type="entry name" value="PTHR11558"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17284">
        <property type="entry name" value="Spermine_synt_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00417">
        <property type="entry name" value="speE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01330">
        <property type="entry name" value="PABS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51006">
        <property type="entry name" value="PABS_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 5" id="KW-0620">Polyamine biosynthesis</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4 7" id="KW-0745">Spermidine biosynthesis</keyword>
    <keyword evidence="1 4 5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PABS" evidence="8">
        <location>
            <begin position="9"/>
            <end position="238"/>
        </location>
    </feature>
    <feature type="region of interest" description="S-methyl-5'-thioadenosine binding" evidence="4">
        <location>
            <begin position="140"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="region of interest" description="Spermidine binding" evidence="4">
        <location>
            <begin position="158"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="4 5">
        <location>
            <position position="158"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="33"/>
        </location>
        <ligand>
            <name>S-methyl-5'-thioadenosine</name>
            <dbReference type="ChEBI" id="CHEBI:17509"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="64"/>
        </location>
        <ligand>
            <name>spermidine</name>
            <dbReference type="ChEBI" id="CHEBI:57834"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="88"/>
        </location>
        <ligand>
            <name>spermidine</name>
            <dbReference type="ChEBI" id="CHEBI:57834"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="108"/>
        </location>
        <ligand>
            <name>S-methyl-5'-thioadenosine</name>
            <dbReference type="ChEBI" id="CHEBI:17509"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="165"/>
        </location>
        <ligand>
            <name>S-methyl-5'-thioadenosine</name>
            <dbReference type="ChEBI" id="CHEBI:17509"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023066"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023115"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00198"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00354"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003836"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51006"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ77601.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="290" mass="32165" checksum="9ACF5F59B5F325C9" modified="2015-12-09" version="1">MSNGLVFNETLHPGVQVSYTCDEILYQEKTEHQDLVLFSNPVFGKILMLDGVTQVTTRDEFIYHEMMSHVPIIAHGAAKSVLIVGGGDCGLAEEVLKHASVESLVQVEIDKSVVDFSEEHFADFNKGVLENPRFELVIEDGLKFAAETDRRFDVVIVDSTDPHGPGAVLFSEEFYRDIHRILTPGGVLVTQNGVPFLQRDELVTSVERFSRIFKDAAAYIAAIPTYFGGHMTLGWASDNVDLRKQAVPILAERFKAAGFDTRYYTPDVHAASFALPKFILDAVEEGRAKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AU10</accession>
    <name>A0A0M7AU10_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Capsid protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_05037</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the microviridae F protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000045">
        <property type="protein sequence ID" value="CTQ77740.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_000065572.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000045.1"/>
    </dbReference>
    <dbReference type="SMR" id="A0A0M7AU10"/>
    <dbReference type="STRING" id="388408.LAX5112_05037"/>
    <dbReference type="EnsemblBacteria" id="CTQ77740">
        <property type="protein sequence ID" value="CTQ77740"/>
        <property type="gene ID" value="LAX5112_05037"/>
    </dbReference>
    <dbReference type="GeneID" id="39482431"/>
    <dbReference type="GeneID" id="55495897"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005198">
        <property type="term" value="F:structural molecule activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.169.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016184">
        <property type="entry name" value="Capsid/spike_ssDNA_virus"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003514">
        <property type="entry name" value="Microviridae_protein_F"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037002">
        <property type="entry name" value="Microviridae_protein_F_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02305">
        <property type="entry name" value="Phage_F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88645">
        <property type="entry name" value="SSF88645"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009963"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77740.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="427" mass="48483" checksum="837DE99C73F426BC" modified="2015-12-09" version="1">MSNIQTGAERMPHDLSHLGFLAGQIGRLITISTTPVIAGDSFEMDAVGALRLSPLRRGLAIDSTVDIFTFYVPHRHVYGEQWIKFMKDGVNATPLPTVNTTGYIDHAAFLGTINPDTNKIPKHLFQGYLNIYNNYFKAPWMPDRTEANPNELNQDDARYGFRCCHLKNIWTAPLPPETELSRQMTTSTTSIDIMGLQAAYANLHTDQERDYFMQRYHDVISSFGGKTSYDADNRPLLVMRSNLWASGYDVDGTDQTSLGQFSGRVQQTYKHSVPRFFVPEHGTMFTLALVRFPPTATKEIQYLNAKGALTYTDIAGDPVLYGNLPPREISMKDVFRSGDSSKKFKIAEGQWYRYAPSYVSPAYHLLEGFPFIQEPPSGDLQERVLIRHHDYDQCFQSVQLLQWNSQVKFNVTVYRNLPTTRDSIMTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPF3</accession>
    <name>A0A0M6ZPF3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Iron-sulfur cluster insertion protein ErpA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">erpA</name>
        <name evidence="3" type="ORF">LAX5112_00163</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the HesB/IscA family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64056.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008194073.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00163"/>
    <dbReference type="EnsemblBacteria" id="CTQ64056">
        <property type="protein sequence ID" value="CTQ64056"/>
        <property type="gene ID" value="LAX5112_00163"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051537">
        <property type="term" value="F:2 iron, 2 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016226">
        <property type="term" value="P:iron-sulfur cluster assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.300.12">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000361">
        <property type="entry name" value="FeS_biogenesis"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016092">
        <property type="entry name" value="FeS_cluster_insertion"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035903">
        <property type="entry name" value="HesB-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01521">
        <property type="entry name" value="Fe-S_biosyn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89360">
        <property type="entry name" value="SSF89360"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00049">
        <property type="entry name" value="TIGR00049"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Fe-S_biosyn" evidence="2">
        <location>
            <begin position="9"/>
            <end position="108"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006718"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01521"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ64056.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="113" mass="11890" checksum="955597677010D582" modified="2015-12-09" version="1">MTETLENRVTVSDRAAKRIAKILSGEASGSMLRVSVEGGGCSGLQYKYDVVGAQEDDDLVIEKLGATVLIDSISLQYMGGSEIDFVDDLIGQAFQINNPHAVAGCGCGTSFTI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPN9</accession>
    <name>A0A0M6ZPN9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Sec-independent protein translocase protein TatA</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7 9" type="primary">tatA</name>
        <name evidence="9" type="ORF">LAX5112_00174</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">The Tat system comprises two distinct complexes: a TatABC complex, containing multiple copies of TatA, TatB and TatC subunits, and a separate TatA complex, containing only TatA subunits. Substrates initially bind to the TatABC complex, which probably triggers association of the separate TatA complex to form the active translocon.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cell membrane</location>
            <topology evidence="7">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the TatA/E family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64090.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008189412.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00174"/>
    <dbReference type="EnsemblBacteria" id="CTQ64090">
        <property type="protein sequence ID" value="CTQ64090"/>
        <property type="gene ID" value="LAX5112_00174"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033281">
        <property type="term" value="C:TAT protein transport complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008320">
        <property type="term" value="F:protein transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043953">
        <property type="term" value="P:protein transport by the Tat complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00236">
        <property type="entry name" value="TatA_E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003369">
        <property type="entry name" value="TatA/B/E"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006312">
        <property type="entry name" value="TatA/E"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02416">
        <property type="entry name" value="TatA_B_E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01411">
        <property type="entry name" value="tatAE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="3 7" id="KW-0653">Protein transport</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 7" id="KW-0811">Translocation</keyword>
    <keyword evidence="2 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="1 7" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="6"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="40"/>
            <end position="74"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023010"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00236"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ64090.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="74" mass="8000" checksum="D6CE1C30E2E51225" modified="2015-12-09" version="1">MGISIWQILIIAVVVVLLFGRGKISELMGDVAKGIKSFKKGMAEDDTEEPPKTIDHESGEPVKSTKAEDQTKAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPR6</accession>
    <name>A0A0M6ZPR6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">HTH-type transcriptional activator AmpR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ampR_2</name>
        <name evidence="3" type="ORF">LAX5112_00387</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64745.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670364.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00387"/>
    <dbReference type="EnsemblBacteria" id="CTQ64745">
        <property type="protein sequence ID" value="CTQ64745"/>
        <property type="gene ID" value="LAX5112_00387"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00039">
        <property type="entry name" value="HTHLYSR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="6"/>
            <end position="63"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ64745.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="290" mass="32290" checksum="4241BBBE57F36710" modified="2015-12-09" version="1">MNISQLPLNALRAFEASARLGSFTKAGMELRVSQTAVSHQVKSLEAILGVSLFDRLPRGVVLTDEGQTLLPVLSDAFGRMSATLSRFEHGNFQEVLTVGAVSTFAYGWLIDRLSDFSRLFPDVDVRLKTNNNRADFLEDGLDYFIRFGDGAWHSTNALQLINAPLSPVCAPLMAEALKTPSDLKAVPLLRSYRLDEWNRWFDAVNVEPPSIRGWMFDSSVTMAAAAAKGAGVALVPVTMFREELETGRLKQPFPQTVSLGRYWLTWLKSRNETLAMRQFRDWIEGQASAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQG9</accession>
    <name>A0A0M6ZQG9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">HTH-type transcriptional regulator YofA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yofA_1</name>
        <name evidence="3" type="ORF">LAX5112_00269</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64360.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040450459.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00269"/>
    <dbReference type="EnsemblBacteria" id="CTQ64360">
        <property type="protein sequence ID" value="CTQ64360"/>
        <property type="gene ID" value="LAX5112_00269"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00039">
        <property type="entry name" value="HTHLYSR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ64360.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="293" mass="32420" checksum="742E3C9A5B03D674" modified="2015-12-09" version="1">MTLEQLRAFLAVARMGGVRKAAEQMNISQPAISARISSLEDYLGTRLFSRETTGVSLTAKGVVLRDYAEQIMAITERIKGDVMSDDSISSLLRLGVAETIAQTWLPDFLAALHTTFQRLNIEVTVDTSFNLREMLLDRALDLTILMGPISEYSTDNLPLPPFDLGWYRPLDLEEPDLSQVPVITYNRSSRPYRELVQKLRDLYGISTQVFPTNSLSTGFEMVASGIGVGILPSVLGRRLVAEGRIASFDPGWQPSPLVFTATYVGVPRNELIARAAKIAQEISINHAKQFNDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQI4</accession>
    <name>A0A0M6ZQI4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Pyruvate dehydrogenase complex repressor</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">pdhR</name>
        <name evidence="5" type="ORF">LAX5112_00336</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64607.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00336"/>
    <dbReference type="EnsemblBacteria" id="CTQ64607">
        <property type="protein sequence ID" value="CTQ64607"/>
        <property type="gene ID" value="LAX5112_00336"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07377">
        <property type="entry name" value="WHTH_GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.530">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011711">
        <property type="entry name" value="GntR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008920">
        <property type="entry name" value="TF_FadR/GntR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000524">
        <property type="entry name" value="Tscrpt_reg_HTH_GntR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07729">
        <property type="entry name" value="FCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00392">
        <property type="entry name" value="GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00035">
        <property type="entry name" value="HTHGNTR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00895">
        <property type="entry name" value="FCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00345">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48008">
        <property type="entry name" value="SSF48008"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50949">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH gntR-type" evidence="4">
        <location>
            <begin position="52"/>
            <end position="120"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ64607.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="302" mass="33989" checksum="795B53A251634928" modified="2015-12-09" version="1">MKDDISARAAFFTFNRNAGQKLDNLIDQFYRVDYFRTVITAQKPMFHPIDTHKTADAAVDQIEELILKGVLQSGDRLPAERVLAEQLNVSRPVLRDALKTLEDRDLIEARQGGGTFVCDLIGPIFSEAIVQLISRHPSAVSDYFDFRRGIEGQASAMAAMRAAPSDIRRLRGIVEQMDTAYEADDPLVESRLDVEFHHAVGEAAHNVVLLHTLHSCYRLFENGVFLNRGRLYHHTSARAEVLKQHKAVFEAIAAGDPKLAQRCAEEHIDYVRATLAATEQLDQREKLADLRRTQASDRAVKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRI7</accession>
    <name>A0A0M6ZRI7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Flagellar motor switch protein FliM</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">fliM_1</name>
        <name evidence="13" type="ORF">LAX5112_00187</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11">FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Bacterial flagellum basal body</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="3">Cell inner membrane</location>
            <topology evidence="3">Peripheral membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the FliM family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64124.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008195690.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00187"/>
    <dbReference type="EnsemblBacteria" id="CTQ64124">
        <property type="protein sequence ID" value="CTQ64124"/>
        <property type="gene ID" value="LAX5112_00187"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009425">
        <property type="term" value="C:bacterial-type flagellum basal body"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003774">
        <property type="term" value="F:cytoskeletal motor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071973">
        <property type="term" value="P:bacterial-type flagellum-dependent cell motility"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006935">
        <property type="term" value="P:chemotaxis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd17908">
        <property type="entry name" value="FliM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.330.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028976">
        <property type="entry name" value="CheC-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001689">
        <property type="entry name" value="Flag_FliM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001543">
        <property type="entry name" value="FliN-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036429">
        <property type="entry name" value="SpoA-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02154">
        <property type="entry name" value="FliM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01052">
        <property type="entry name" value="FliMN_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101801">
        <property type="entry name" value="SSF101801"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103039">
        <property type="entry name" value="SSF103039"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0975">Bacterial flagellum</keyword>
    <keyword evidence="6" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="13" id="KW-0966">Cell projection</keyword>
    <keyword evidence="7" id="KW-0145">Chemotaxis</keyword>
    <keyword evidence="13" id="KW-0969">Cilium</keyword>
    <keyword evidence="8" id="KW-0283">Flagellar rotation</keyword>
    <keyword evidence="13" id="KW-0282">Flagellum</keyword>
    <keyword evidence="9" id="KW-0472">Membrane</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FliMN_C" evidence="12">
        <location>
            <begin position="235"/>
            <end position="305"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00021898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022500"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022779"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023143"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00025044"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF01052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="CTQ64124.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="319" mass="35734" checksum="E66D9CE47F7BD916" modified="2015-12-09" version="1">MLDAATDTQSTSNSERAMITDRLLDAAGISVDRLPMLPVVFDRMARLMADVMRQKSPSPSYISVSYVENNRIGDVLDEFESNALVAVLYSPEWDARVLVGFDRDFIFTLVDVLFGADGTEPPIDEERPFSNIETRIARTIFEIAAKSLAESFAPIAETTLKIERIESRMDFAVVGRSNNPAVVGRLLQQAIGRGGEVFVVLPHATLNPLRQALSQVLSGEMSGRDKQWTQHFHNEIQRTEVKLEAILEEREMHLGELSNLKVGQVIELQATARSPVTLACNDQPIFTCQLGQLDGSYTLQIEELIHEEEKDLFDDLRNR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRK3</accession>
    <name>A0A0M6ZRK3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">L-serine dehydratase</fullName>
            <ecNumber evidence="9">4.3.1.17</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">sdaB</name>
        <name evidence="12" type="ORF">LAX5112_00424</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 9">
            <text>L-serine = NH4(+) + pyruvate</text>
            <dbReference type="Rhea" id="RHEA:19169"/>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="ChEBI" id="CHEBI:33384"/>
            <dbReference type="EC" id="4.3.1.17"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 9">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="3 9">Belongs to the iron-sulfur dependent L-serine dehydratase family.</text>
    </comment>
    <dbReference type="EC" id="4.3.1.17" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64851.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670390.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00424"/>
    <dbReference type="EnsemblBacteria" id="CTQ64851">
        <property type="protein sequence ID" value="CTQ64851"/>
        <property type="gene ID" value="LAX5112_00424"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003941">
        <property type="term" value="F:L-serine ammonia-lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006094">
        <property type="term" value="P:gluconeogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.90">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029009">
        <property type="entry name" value="ASB_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004644">
        <property type="entry name" value="Fe-S_L-Ser_mono"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005130">
        <property type="entry name" value="Ser_deHydtase-like_asu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005131">
        <property type="entry name" value="Ser_deHydtase_bsu"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03313">
        <property type="entry name" value="SDH_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03315">
        <property type="entry name" value="SDH_beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF143548">
        <property type="entry name" value="SSF143548"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00720">
        <property type="entry name" value="sda_mono"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 9" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="9" id="KW-0312">Gluconeogenesis</keyword>
    <keyword evidence="6 9" id="KW-0408">Iron</keyword>
    <keyword evidence="7 9" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="8 9 12" id="KW-0456">Lyase</keyword>
    <keyword evidence="5 9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SDH_beta" evidence="11">
        <location>
            <begin position="4"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="domain" description="SDH_alpha" evidence="10">
        <location>
            <begin position="193"/>
            <end position="458"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001161"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008636"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU366059"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF03313"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF03315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ64851.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="464" mass="49193" checksum="A8393F35A60E32B1" modified="2015-12-09" version="1">MFISVFDIFKIGIGPSSSHTVGPMVAVHRYVDRLRANPTVCRSASRITVTLHGSLAFTGKGHATDKAVCLGLLGATPDTLDPDQVEPMLEQLAVDQRLRIEGLFDLPFHPEKDVIFDYGPSLPLHANGMTFHLLGSDGSVLDSFVFYSIGGGFVASEAELRKTTNEPVNELARQEVPFPFASAKQMLEMGLDHDLSIAEMKLQNECADKTKEEVEAGIDKLWSAMDACINRGITQSGILPGGLKVKRRAADIYQKLLKEGRSNPPFEHNVVDWLGVYAMAVNEENAAGGRVVTAPTNGAAGVIPAVTRYYLDHCPDADANGIRTFLLTAAAIGGIIKSNASISGAEVGCQGEVGSASAMAAAGLCAALGGTNEQIENAAEIALEHHLGMTCDPIAGLVQVPCIERNALGAVKAVTAASLALRGDGSHFVPLDGCIETMRQTGMDMMEQYKETSKGGLAVNIVEC</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRX5</accession>
    <name>A0A0M6ZRX5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00465</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64971.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ64971">
        <property type="protein sequence ID" value="CTQ64971"/>
        <property type="gene ID" value="LAX5112_00465"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="51"/>
            <end position="73"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64971.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="73" mass="7998" checksum="C1AB05659E6A569E" modified="2015-12-09" version="1">MNRNTTQDIVSNILNFTESLSQRAQRAMRPNGAGDPEALEAEQHVIAFAPSSERTAETGQPLFSGPSLSKRIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSM6</accession>
    <name>A0A0M6ZSM6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Clan AA aspartic protease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00555</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65231.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670492.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00555"/>
    <dbReference type="EnsemblBacteria" id="CTQ65231">
        <property type="protein sequence ID" value="CTQ65231"/>
        <property type="gene ID" value="LAX5112_00555"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004190">
        <property type="term" value="F:aspartic-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd05483">
        <property type="entry name" value="retropepsin_like_bacteria"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.70.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001969">
        <property type="entry name" value="Aspartic_peptidase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011969">
        <property type="entry name" value="Clan_AA_Asp_peptidase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021109">
        <property type="entry name" value="Peptidase_aspartic_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034122">
        <property type="entry name" value="Retropepsin-like_bacterial"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50630">
        <property type="entry name" value="SSF50630"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02281">
        <property type="entry name" value="clan_AA_DTGA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00141">
        <property type="entry name" value="ASP_PROTEASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0645">Protease</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="29"/>
            <end position="50"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65231.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="167" mass="18131" checksum="43F37D1433FDFAAF" modified="2015-12-09" version="1">MYRFIIVLVLCAAIAPIVPLWVEHQNNQTSKTAAATTNASSETGERRHRISANRSGQFVADVHLNGHMHEMLVDTGASATVLPVSVARIVGIFPANDDFKLRVSTANGTTYGARAVIDRLQIGRINLRNIEALVLQDSSLSIPLLGMTALNKLDRFDISNGTLVLIQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZT77</accession>
    <name>A0A0M6ZT77_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00824</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65975.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00824"/>
    <dbReference type="EnsemblBacteria" id="CTQ65975">
        <property type="protein sequence ID" value="CTQ65975"/>
        <property type="gene ID" value="LAX5112_00824"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd05018">
        <property type="entry name" value="CoxG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.530.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010419">
        <property type="entry name" value="CO_DH_gsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023393">
        <property type="entry name" value="START-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38588">
        <property type="entry name" value="PTHR38588"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06240">
        <property type="entry name" value="COXG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="144"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="160"/>
            <end position="191"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65975.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="191" mass="20191" checksum="08E6B40717452F95" modified="2015-12-09" version="1">MQMTDSQRIEAPRETVWAALNDPEVLKASIPGCEELIKHSETELEAKVKLKVGPVKATFGGKVELLDLDPPNGYRIEGEGSGGVAGFARGGAKVQLEADGPDATILHYEVDAKVGGKLAQLGARLIDSTAKRLAGEFFTAFAEQVGPSVPEDAEESADALGDADASKEKKGWLGGLFRGKKTEETPQEAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTK9</accession>
    <name>A0A0M6ZTK9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00876</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66119.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00876"/>
    <dbReference type="EnsemblBacteria" id="CTQ66119">
        <property type="protein sequence ID" value="CTQ66119"/>
        <property type="gene ID" value="LAX5112_00876"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021736">
        <property type="entry name" value="DUF3305"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11749">
        <property type="entry name" value="DUF3305"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="163"/>
            <end position="189"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66119.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="189" mass="21816" checksum="DDCF71C08B5D9022" modified="2015-12-09" version="1">MNTERSRSMPVGVVVRRLPGVTRWQKWSWRAVSLLPGAGDADWQVLRKEGDAVEYHAATLPLELHRAETEAYLTALSDKTPSLYVVMRPAEELNRDVPMEVMLITASAYEGQDYADTSDVLVEKVPMPPGLIAWVREFAEMHHEDEIFIKRRRDKKRVDLQEEGIGDPRIRQMTDVYRTPRRKSKDTLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZU03</accession>
    <name>A0A0M6ZU03_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DSBA-like thioredoxin domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00926</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66255.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00926"/>
    <dbReference type="EnsemblBacteria" id="CTQ66255">
        <property type="protein sequence ID" value="CTQ66255"/>
        <property type="gene ID" value="LAX5112_00926"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001853">
        <property type="entry name" value="DSBA-like_thioredoxin_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01323">
        <property type="entry name" value="DSBA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DSBA" evidence="1">
        <location>
            <begin position="14"/>
            <end position="214"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01323"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66255.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="223" mass="25101" checksum="632A166F04D07AAE" modified="2015-12-09" version="1">MTDMTDLDMEELLQIDIVSDVVCPWCIVGFKQLEQAIEKTGVSVAIKWHPFELNPDMAVEGENLREHIMRKYGSTVEQSQAARDRLTELGKELGFEFRFSDESRMVNTFKAHQLIHWAGPQGQEHPLKMALFEAYFRDGKDLNDNAVLVKIVGSVGLDEIEALKVLEDGRYAGPVKQEEKFWIQNGVQGVPAVVFDRRHLITGAQGVDNYAAILKQLVEGEAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUN4</accession>
    <name>A0A0M6ZUN4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Cytochrome c</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_00836</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66007.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670740.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00836"/>
    <dbReference type="EnsemblBacteria" id="CTQ66007">
        <property type="protein sequence ID" value="CTQ66007"/>
        <property type="gene ID" value="LAX5112_00836"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.760.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009056">
        <property type="entry name" value="Cyt_c-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036909">
        <property type="entry name" value="Cyt_c-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030999">
        <property type="entry name" value="Thiosulf_SoxX"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00034">
        <property type="entry name" value="Cytochrom_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46626">
        <property type="entry name" value="SSF46626"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR04485">
        <property type="entry name" value="thiosulf_SoxX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51007">
        <property type="entry name" value="CYTC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 4" id="KW-0349">Heme</keyword>
    <keyword evidence="3 4" id="KW-0408">Iron</keyword>
    <keyword evidence="2 4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="5">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005808969" evidence="5">
        <location>
            <begin position="27"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="domain" description="Cytochrome c" evidence="6">
        <location>
            <begin position="51"/>
            <end position="157"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00433"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ66007.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="159" mass="16870" checksum="801A0448A22567BC" modified="2015-12-09" version="1">MTKGARLWGAAFATCLAGTLSVSALHAETIAPTAVEIVDMEAKSSLTGKAGDPVAGRDTFADRKKGNCLACHANADLAKLLFHGEVGPELDGVGDRWSTEQLRAIVINSKQVFGDQTIMPGFYTTALGARIADKFTDKTILSAQEVEDVVAYLLTLKEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZV90</accession>
    <name>A0A0M6ZV90_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 5">Alpha-galactosidase</fullName>
            <ecNumber evidence="2 5">3.2.1.22</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">rafA</name>
        <name evidence="10" type="ORF">LAX5112_00626</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 5">
            <text>Hydrolysis of terminal, non-reducing alpha-D-galactose residues in alpha-D-galactosides, including galactose oligosaccharides, galactomannans and galactolipids.</text>
            <dbReference type="EC" id="3.2.1.22"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the glycosyl hydrolase.</text>
    </comment>
    <dbReference type="EC" id="3.2.1.22" evidence="2 5"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65444.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670581.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00626"/>
    <dbReference type="EnsemblBacteria" id="CTQ65444">
        <property type="protein sequence ID" value="CTQ65444"/>
        <property type="gene ID" value="LAX5112_00626"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052692">
        <property type="term" value="F:raffinose alpha-galactosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016052">
        <property type="term" value="P:carbohydrate catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd14791">
        <property type="entry name" value="GH36"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1180">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.70.98.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038417">
        <property type="entry name" value="Alpga-gal_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002252">
        <property type="entry name" value="Glyco_hydro_36"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031705">
        <property type="entry name" value="Glyco_hydro_36_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031704">
        <property type="entry name" value="Glyco_hydro_36_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013780">
        <property type="entry name" value="Glyco_hydro_b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16874">
        <property type="entry name" value="Glyco_hydro_36C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16875">
        <property type="entry name" value="Glyco_hydro_36N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005536">
        <property type="entry name" value="Agal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00743">
        <property type="entry name" value="GLHYDRLASE36"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5 10" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="3 5 10" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glyco_hydro_36N" evidence="9">
        <location>
            <begin position="22"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="domain" description="Glyco_hydro_36C" evidence="8">
        <location>
            <begin position="600"/>
            <end position="677"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="7">
        <location>
            <begin position="328"/>
            <end position="329"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="7">
        <location>
            <begin position="436"/>
            <end position="440"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="6">
        <location>
            <position position="438"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="6">
        <location>
            <position position="495"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="167"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="403"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="473"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="495"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001255"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRNR" id="PIRNR005536"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR005536-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR005536-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF16874"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF16875"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ65444.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="693" mass="77316" checksum="466FD1EA5DAAE711" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZW00</accession>
    <name>A0A0M6ZW00_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">HTH-type transcriptional repressor YvoA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yvoA_1</name>
        <name evidence="2" type="ORF">LAX5112_00706</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65643.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670644.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00706"/>
    <dbReference type="EnsemblBacteria" id="CTQ65643">
        <property type="protein sequence ID" value="CTQ65643"/>
        <property type="gene ID" value="LAX5112_00706"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07377">
        <property type="entry name" value="WHTH_GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1410.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028978">
        <property type="entry name" value="Chorismate_lyase_/UTRA_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000524">
        <property type="entry name" value="Tscrpt_reg_HTH_GntR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011663">
        <property type="entry name" value="UTRA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00392">
        <property type="entry name" value="GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07702">
        <property type="entry name" value="UTRA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00035">
        <property type="entry name" value="HTHGNTR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00345">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00866">
        <property type="entry name" value="UTRA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64288">
        <property type="entry name" value="SSF64288"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50949">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH gntR-type" evidence="1">
        <location>
            <begin position="17"/>
            <end position="85"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65643.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="251" mass="28145" checksum="FDDA97B3780C471F" modified="2015-12-09" version="1">MLNDFLMPDQWFSQNAGPRYVQLRHRLEEAIKTGLLPASSSLPPEREIAELTGFSRVTVRKAIQEMVKDGTIEQRQGSGSFVREATQRVEQSLSHLTSFTEDMANRGMQTTSRWLERGVFMPTTEEVATLSLTPDDQVARIYRLREAGGQPMALERAALPLDILPNPLEVVTSLYEVLAKHGHRPVRAVQKIAAVNLEPADAHLLSVPEGTAGLRIQRISYLETGRVAEFTQSIYRGDAYDFVAELRLSDR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZW12</accession>
    <name>A0A0M6ZW12_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Lipoprotein NlpI</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00968</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66436.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670884.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00968"/>
    <dbReference type="EnsemblBacteria" id="CTQ66436">
        <property type="protein sequence ID" value="CTQ66436"/>
        <property type="gene ID" value="LAX5112_00968"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_repeat"/>
    </dbReference>
    <dbReference type="SMART" id="SM00028">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="SSF48452"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50005">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0802">TPR repeat</keyword>
    <feature type="repeat" description="TPR" evidence="1">
        <location>
            <begin position="10"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="repeat" description="TPR" evidence="1">
        <location>
            <begin position="44"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="repeat" description="TPR" evidence="1">
        <location>
            <begin position="147"/>
            <end position="180"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00339"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66436.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="617" mass="69906" checksum="799BF41D054777FB" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWB2</accession>
    <name>A0A0M6ZWB2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01002</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66531.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ66531">
        <property type="protein sequence ID" value="CTQ66531"/>
        <property type="gene ID" value="LAX5112_01002"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ66531.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="53" mass="6112" checksum="B200DD28103C761F" modified="2015-12-09" version="1">MFSPLVLKAMRETYPYHTLLFVERVLFKENVFAEAGRFQGAEDCLEPKSSCLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZX52</accession>
    <name>A0A0M6ZX52_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">SmpA / OmlA family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">LAX5112_01030</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66610.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008197254.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01030"/>
    <dbReference type="EnsemblBacteria" id="CTQ66610">
        <property type="protein sequence ID" value="CTQ66610"/>
        <property type="gene ID" value="LAX5112_01030"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009279">
        <property type="term" value="C:cell outer membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1450.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026592">
        <property type="entry name" value="BamE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037873">
        <property type="entry name" value="BamE-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007450">
        <property type="entry name" value="Lipoprotein_SmpA/OmlA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37482">
        <property type="entry name" value="PTHR37482"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04355">
        <property type="entry name" value="SmpA_OmlA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0998">Cell outer membrane</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="domain" description="SmpA_OmlA" evidence="4">
        <location>
            <begin position="29"/>
            <end position="103"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023237"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF04355"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ66610.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="145" mass="15571" checksum="36B1F46949290F4A" modified="2015-12-09" version="1">MNFKACALLLPLMATLPLGGCFTSTYTHGHVITSNMMSQVQVGSSREQVELVLGSPSTRSSLDGDAYYYISQKTATTAFLAPDIVEQRVVAVYFDEDGFVKDMGNYTLEDGKIVDIVTRTTRTGGADYGFLSQILKGAANPGLGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXY6</accession>
    <name>A0A0M6ZXY6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Fatty acid oxidation complex subunit alpha</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">fadJ_1</name>
        <name evidence="11" type="ORF">LAX5112_01178</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>a (3S)-3-hydroxyacyl-CoA + NAD(+) = a 3-oxoacyl-CoA + H(+) + NADH</text>
            <dbReference type="Rhea" id="RHEA:22432"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57318"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:90726"/>
            <dbReference type="EC" id="1.1.1.35"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1">Lipid metabolism; fatty acid beta-oxidation.</text>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the enoyl-CoA hydratase/isomerase family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67012.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671217.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01178"/>
    <dbReference type="EnsemblBacteria" id="CTQ67012">
        <property type="protein sequence ID" value="CTQ67012"/>
        <property type="gene ID" value="LAX5112_01178"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00659"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003857">
        <property type="term" value="F:3-hydroxyacyl-CoA dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070403">
        <property type="term" value="F:NAD+ binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006635">
        <property type="term" value="P:fatty acid beta-oxidation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006176">
        <property type="entry name" value="3-OHacyl-CoA_DH_NAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006108">
        <property type="entry name" value="3HC_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008927">
        <property type="entry name" value="6-PGluconate_DH-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029045">
        <property type="entry name" value="ClpP/crotonase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018376">
        <property type="entry name" value="Enoyl-CoA_hyd/isom_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001753">
        <property type="entry name" value="Enoyl-CoA_hydra/iso"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00725">
        <property type="entry name" value="3HCDH"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02737">
        <property type="entry name" value="3HCDH_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00378">
        <property type="entry name" value="ECH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48179">
        <property type="entry name" value="SSF48179"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52096">
        <property type="entry name" value="SSF52096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00166">
        <property type="entry name" value="ENOYL_COA_HYDRATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0276">Fatty acid metabolism</keyword>
    <keyword evidence="4" id="KW-0442">Lipid degradation</keyword>
    <keyword evidence="6" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="5" id="KW-0520">NAD</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="3HCDH_N" evidence="10">
        <location>
            <begin position="294"/>
            <end position="471"/>
        </location>
    </feature>
    <feature type="domain" description="3HCDH" evidence="9">
        <location>
            <begin position="476"/>
            <end position="569"/>
        </location>
    </feature>
    <feature type="domain" description="3HCDH" evidence="9">
        <location>
            <begin position="603"/>
            <end position="688"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008750"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022832"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022963"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023693"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU003707"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF00725"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF02737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ67012.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="695" mass="73842" checksum="465069A8CD84780C" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZY88</accession>
    <name>A0A0M6ZY88_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01225</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67132.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671064.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01225"/>
    <dbReference type="EnsemblBacteria" id="CTQ67132">
        <property type="protein sequence ID" value="CTQ67132"/>
        <property type="gene ID" value="LAX5112_01225"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="115"/>
            <end position="137"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67132.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="152" mass="16522" checksum="20A1256C7ABEB55F" modified="2015-12-09" version="1">MFKIKVRRNTRMKLDTSALSRGPNRVKVGFPAGKAGADIVQRAIWNHFGTSGGGWGGPIPERPFLHNAMADHRSEYRGHMRKSAAKILKGQTALQTVLSKLGVLAQGHIQGEITNLSSPPNSPVTVERKGSSNPLIDTGEMRQAVTWKVDDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZ58</accession>
    <name>A0A0M6ZZ58_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Adenylate cyclase 1</fullName>
            <ecNumber evidence="4">4.6.1.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">cyaA_7</name>
        <name evidence="4" type="ORF">LAX5112_01339</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="4.6.1.1" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67340.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671155.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01339"/>
    <dbReference type="EnsemblBacteria" id="CTQ67340">
        <property type="protein sequence ID" value="CTQ67340"/>
        <property type="gene ID" value="LAX5112_01339"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004016">
        <property type="term" value="F:adenylate cyclase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009190">
        <property type="term" value="P:cyclic nucleotide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035556">
        <property type="term" value="P:intracellular signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07302">
        <property type="entry name" value="CHD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1230">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001054">
        <property type="entry name" value="A/G_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00211">
        <property type="entry name" value="Guanylate_cyc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00044">
        <property type="entry name" value="CYCc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50125">
        <property type="entry name" value="GUANYLATE_CYCLASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0456">Lyase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="318"/>
            <end position="339"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="3">
        <location>
            <begin position="341"/>
            <end position="395"/>
        </location>
    </feature>
    <feature type="domain" description="Guanylate cyclase" evidence="2">
        <location>
            <begin position="422"/>
            <end position="554"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ67340.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="626" mass="67755" checksum="7BF13ACF1F644094" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZG8</accession>
    <name>A0A0M6ZZG8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Carnitine catabolism transcriptional activator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">cdhR_4</name>
        <name evidence="2" type="ORF">LAX5112_01487</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67701.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671298.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01487"/>
    <dbReference type="EnsemblBacteria" id="CTQ67701">
        <property type="protein sequence ID" value="CTQ67701"/>
        <property type="gene ID" value="LAX5112_01487"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002818">
        <property type="entry name" value="DJ-1/PfpI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01965">
        <property type="entry name" value="DJ-1_PfpI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="SSF52317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="1">
        <location>
            <begin position="230"/>
            <end position="328"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67701.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="336" mass="36726" checksum="C33E6588C99B7EA6" modified="2015-12-09" version="1">MPNTDLAFQSPANAPDKRVVALAYDGLCLFEFGICCELFGLKRPEMGKDWYSFEVASLDPGQPLRASNGVRVEVDGGLDLLKEAGTILIPGWSGINDPIPGRLRDALCQAHANGARLLSICSGVFVLAATGLLEGKQVTTHWRYSEALSARYPDLVTVPNVLYTDNGQILTSAGSAAGIDLCLHLIRRDFGPSAANSVARRLVVPPHREGGQAQFVDTSVQAPNEANRFGPLFDYLRANLSGNHTIKSLAARSGMSERTFLRRFESATGTTPARWVTRLRLQKAKDLLEESDLSIDKIADQTGFGTAATMRHHFREMLSTSPTRHRRLFQSTSKQT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0H1</accession>
    <name>A0A0M7A0H1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">L-carnitine dehydrogenase</fullName>
            <ecNumber evidence="1">1.1.1.108</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">lcdH_1</name>
        <name evidence="1" type="ORF">LAX5112_01634</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.1.1.108" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68097.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008196724.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01634"/>
    <dbReference type="EnsemblBacteria" id="CTQ68097">
        <property type="protein sequence ID" value="CTQ68097"/>
        <property type="gene ID" value="LAX5112_01634"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047728">
        <property type="term" value="F:carnitine 3-dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029069">
        <property type="entry name" value="HotDog_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54637">
        <property type="entry name" value="SSF54637"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ68097.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="164" mass="18826" checksum="E6B21956F9048F84" modified="2015-12-09" version="1">MPIAWKPEPVRCDVMTVKDEWIDYNGHLNMAYYNVLLDKACDQVFEQLGLGPDYVKERNASFFTAEAHVCYVRELSAGMPVIVSLQLIDFDEKRAHFYEEMHHAEEDWLSATSEQLCLHVDMGARKVAPWPEDITANLQALADAHSSLPRPERVGRHIEIKKKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A220</accession>
    <name>A0A0M7A220_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Heme-degrading monooxygenase 2</fullName>
            <ecNumber evidence="2">1.14.99.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">isdI</name>
        <name evidence="2" type="ORF">LAX5112_01701</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.14.99.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68340.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671472.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01701"/>
    <dbReference type="EnsemblBacteria" id="CTQ68340">
        <property type="protein sequence ID" value="CTQ68340"/>
        <property type="gene ID" value="LAX5112_01701"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004497">
        <property type="term" value="F:monooxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007138">
        <property type="entry name" value="ABM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03992">
        <property type="entry name" value="ABM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51725">
        <property type="entry name" value="ABM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0503">Monooxygenase</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABM" evidence="1">
        <location>
            <begin position="2"/>
            <end position="98"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51725"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68340.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="104" mass="11742" checksum="C6CE7A54A450801B" modified="2015-12-09" version="1">MYLAMNRFAVKKGQEEAFEAVWTGRETRLHELDGFKSFHLLKGPEGEDGQTVLYASHTIWNSKDDFLAWTKSEQFRDAHKNAGSNKDLYAGPPKFEGFEAVSGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A222</accession>
    <name>A0A0M7A222_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01506</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67753.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67753">
        <property type="protein sequence ID" value="CTQ67753"/>
        <property type="gene ID" value="LAX5112_01506"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67753.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="69" mass="7341" checksum="F9E6FFDDC122AFC9" modified="2015-12-09" version="1">MGTLLDFASAPRPAARVDPRSTPPRSTNPEEFGKVILFPGIRYEHHDLDLAARIATIGKAAGPAGSDKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2D9</accession>
    <name>A0A0M7A2D9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Molybdenum transport system permease</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">modB_1</name>
        <name evidence="12" type="ORF">LAX5112_02018</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 10">Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3 10">Cell inner membrane</location>
            <topology evidence="3 10">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="9">Cell membrane</location>
            <topology evidence="9">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 10">Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69195.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671712.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02018"/>
    <dbReference type="EnsemblBacteria" id="CTQ69195">
        <property type="protein sequence ID" value="CTQ69195"/>
        <property type="gene ID" value="LAX5112_02018"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015098">
        <property type="term" value="F:molybdate ion transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011867">
        <property type="entry name" value="ModB_ABC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02141">
        <property type="entry name" value="modB_ABC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="10" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="5 10" id="KW-0500">Molybdenum</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="9" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="20"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="52"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="86"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="137"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="200"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="11">
        <location>
            <begin position="14"/>
            <end position="223"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00007069"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022505"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU365097"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ69195.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="235" mass="24713" checksum="B8672CD1DB7CADC6" modified="2015-12-09" version="1">MDFLTLQPAEWQALLLTLRVAAAALLVALPLAVMVAYGLARYRFPGHGVLNALVHLPLVLPPVVTGYVLLLAFGRNGPIGSVLYDTFGITFAFNWTGAALAAGVMAFPLMVRPIRLSFEAVDPKLEDAARSLGARRLVSFLTVTLPLALPGILGGAILGFAKAMGEFGATITFVSNIPGETRTLALALYTATQSPSGDLAAFRLTIIATVVAFAALIASELLARRLRKRLGGADA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2I3</accession>
    <name>A0A0M7A2I3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01848</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68692.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01848"/>
    <dbReference type="EnsemblBacteria" id="CTQ68692">
        <property type="protein sequence ID" value="CTQ68692"/>
        <property type="gene ID" value="LAX5112_01848"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015000">
        <property type="entry name" value="EipB-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08904">
        <property type="entry name" value="EipB_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ68692.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="293" mass="31816" checksum="5F8A1FC1D9991B92" modified="2015-12-09" version="1">MRRNVSDRAFETAFLFKCAVAAIVVVTFGASEAAAKVAGIQLAPHRAVYDMKLSDTEQQSGIAGLSGRMVYEFSGNACEGYSVNFRFVTEFRDLSGGSQVTDLQTTSFEGPDAESYQFLSKTYVDQKLVESSRGLARTETGLKAVELKEPDEKSLQIGQDVQFPTEHLMNIVKIAQDGGHFTASDIYDGAETGDKVFGTTAVIGAKAVGIVPEIDGERQDALDAVASWPVTVAYFDPSTQENSGEQTPVYQLSFRLFENGVSDKLVLDYGDFKIAGTMTALELRDLTDKSDCE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A329</accession>
    <name>A0A0M7A329_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative ribosomal N-acetyltransferase YdaF</fullName>
            <ecNumber evidence="2">2.3.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ydaF_1</name>
        <name evidence="2" type="ORF">LAX5112_01954</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.3.1.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68971.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671685.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01954"/>
    <dbReference type="EnsemblBacteria" id="CTQ68971">
        <property type="protein sequence ID" value="CTQ68971"/>
        <property type="gene ID" value="LAX5112_01954"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13302">
        <property type="entry name" value="Acetyltransf_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="14"/>
            <end position="180"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68971.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="196" mass="22010" checksum="3812342F1CA1B6CE" modified="2015-12-09" version="1">MSWPPPITLTGTHVSLVPLSLEHADDLSEASAEGDLWKAWYTSIPKPADVRAEIERRLGLQEAGSMLPFAVLTPDGKAVGMTTYMNIDPVHERVEIGSTWYRKSVQRTGLNTECKLMLLTHAFEELDCIAVEFRTHFLNRQSRTAIERLGARLDGVLRSHQRSADGALRDTTVYSILPHEWPAVKNGLMFKLSRDI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3S9</accession>
    <name>A0A0M7A3S9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Arylesterase</fullName>
            <ecNumber evidence="2">3.1.1.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02229</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.1.2" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69735.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02229"/>
    <dbReference type="EnsemblBacteria" id="CTQ69735">
        <property type="protein sequence ID" value="CTQ69735"/>
        <property type="gene ID" value="LAX5112_02229"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004064">
        <property type="term" value="F:arylesterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016298">
        <property type="term" value="F:lipase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006629">
        <property type="term" value="P:lipid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008265">
        <property type="entry name" value="Lipase_GDSL_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013830">
        <property type="entry name" value="SGNH_hydro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036514">
        <property type="entry name" value="SGNH_hydro_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13472">
        <property type="entry name" value="Lipase_GDSL_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01098">
        <property type="entry name" value="LIPASE_GDSL_SER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SGNH_hydro" evidence="1">
        <location>
            <begin position="44"/>
            <end position="202"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13472"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69735.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="224" mass="23901" checksum="0F157ACA254B1E36" modified="2015-12-09" version="1">MGLLCHVFQSGKCIRVYRFFLFLMLPLLWLGTSTANAADLKLVVLGDSLSAGYQLQAGEGFPEQLQKALDARGHSVEVVNAGVSGDTSSGGLSRLDWSVGTDADAVIVELGANDALRGIQPDLTRNNLTQIVKRLAERDIAVLLAGMLAPRNLGEDYAASFDPIYKDIAEAHGALLYPFFLEGVALNPDLNLADGMHPNAEGVGVIVENILPTVEELLAQASKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3Y0</accession>
    <name>A0A0M7A3Y0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">D-beta-hydroxybutyrate dehydrogenase</fullName>
            <ecNumber evidence="1">1.1.1.30</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">bdhA_1</name>
        <name evidence="1" type="ORF">LAX5112_01993</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.1.1.30" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69126.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671695.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01993"/>
    <dbReference type="EnsemblBacteria" id="CTQ69126">
        <property type="protein sequence ID" value="CTQ69126"/>
        <property type="gene ID" value="LAX5112_01993"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003858">
        <property type="term" value="F:3-hydroxybutyrate dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011294">
        <property type="entry name" value="3-OHbutyrate_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01963">
        <property type="entry name" value="PHB_DH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ69126.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="260" mass="27343" checksum="1E0B9E2CE85DBC9D" modified="2015-12-09" version="1">MLANKTAVVTGSTSGIGLGCARAFAEKGANVVINGLGDADEIEKTRAGIEADFGVKCVYSPANMLKGDEIAGMISDTQKEFGSVDILVNNAGIQYVSPVDEFPIDKWDAIIAINLSSAFHAIRAAVPGMKENGWGRIINTASAHALVASPYKSAYVAAKHGIAGLTKTVALEVAEQGITVNAICPGYVWTPLVEAQIPDTMKARNMTEEEVKKDVLLKAQPTKKFVTIEQVAGYAVFLCSDTASSITGAIMTMDGGWTAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A440</accession>
    <name>A0A0M7A440_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Leucine-responsive regulatory protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">lrp_7</name>
        <name evidence="5" type="ORF">LAX5112_02082</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69351.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671754.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02082"/>
    <dbReference type="EnsemblBacteria" id="CTQ69351">
        <property type="protein sequence ID" value="CTQ69351"/>
        <property type="gene ID" value="LAX5112_02082"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000485">
        <property type="entry name" value="AsnC-type_HTH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019888">
        <property type="entry name" value="Tscrpt_reg_AsnC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019887">
        <property type="entry name" value="Tscrpt_reg_AsnC/Lrp_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01037">
        <property type="entry name" value="AsnC_trans_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13404">
        <property type="entry name" value="HTH_AsnC-type"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00033">
        <property type="entry name" value="HTHASNC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00344">
        <property type="entry name" value="HTH_ASNC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50956">
        <property type="entry name" value="HTH_ASNC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH asnC-type" evidence="4">
        <location>
            <begin position="5"/>
            <end position="66"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50956"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ69351.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="155" mass="17160" checksum="17D1F97BF310842D" modified="2015-12-09" version="1">MQIALDSFDVKLLAALQENSAATNAEIGETIGLSASQVSRRRQKLEDNRIIRRYRAALDPEALGFTVTAFVGVTLGAHSRENARKFRNMVTAMPEVQEAHTLTGDVDYMLKVVVRDLKALSRIVNDELLPQEAVQHVKSSIAMDTLKDDNLLPLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="31" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4A2</accession>
    <name>A0A0M7A4A2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Biosynthetic peptidoglycan transglycosylase</fullName>
            <ecNumber evidence="11">2.4.1.129</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="11">Glycan polymerase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="11">Peptidoglycan glycosyltransferase MtgA</fullName>
            <shortName evidence="11">PGT</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="14" type="primary">pbpG_1</name>
        <name evidence="11" type="synonym">mtgA</name>
        <name evidence="14" type="ORF">LAX5112_02070</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11">Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="11">
            <text>[GlcNAc-(1-&gt;4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)](n)-di-trans,octa-cis-undecaprenyl diphosphate + beta-D-GlcNAc-(1-&gt;4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)-di-trans,octa-cis-undecaprenyl diphosphate = [GlcNAc-(1-&gt;4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)](n+1)-di-trans-octa-cis-undecaprenyl diphosphate + di-trans,octa-cis-undecaprenyl diphosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:23708"/>
            <dbReference type="Rhea" id="RHEA-COMP:9602"/>
            <dbReference type="Rhea" id="RHEA-COMP:9603"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:58405"/>
            <dbReference type="ChEBI" id="CHEBI:60033"/>
            <dbReference type="ChEBI" id="CHEBI:78435"/>
            <dbReference type="EC" id="2.4.1.129"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="11">Cell wall biogenesis; peptidoglycan biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="11">Cell inner membrane</location>
            <topology evidence="11">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="11">Belongs to the glycosyltransferase 51 family.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.129" evidence="11"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69322.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671744.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02070"/>
    <dbReference type="EnsemblBacteria" id="CTQ69322">
        <property type="protein sequence ID" value="CTQ69322"/>
        <property type="gene ID" value="LAX5112_02070"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00219"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009274">
        <property type="term" value="C:peptidoglycan-based cell wall"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016763">
        <property type="term" value="F:pentosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008955">
        <property type="term" value="F:peptidoglycan glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008360">
        <property type="term" value="P:regulation of cell shape"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3810.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00766">
        <property type="entry name" value="PGT_MtgA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001264">
        <property type="entry name" value="Glyco_trans_51"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023346">
        <property type="entry name" value="Lysozyme-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036950">
        <property type="entry name" value="PBP_transglycosylase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011812">
        <property type="entry name" value="Pep_trsgly"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30400">
        <property type="entry name" value="PTHR30400"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00912">
        <property type="entry name" value="Transgly"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53955">
        <property type="entry name" value="SSF53955"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02070">
        <property type="entry name" value="mono_pep_trsgly"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 11" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="1 11" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 11" id="KW-0133">Cell shape</keyword>
    <keyword evidence="10 11" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="3 11" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="9 11" id="KW-0472">Membrane</keyword>
    <keyword evidence="7 11" id="KW-0573">Peptidoglycan synthesis</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 11" id="KW-0808">Transferase</keyword>
    <keyword evidence="5 11" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8 11" id="KW-1133">Transmembrane helix</keyword>
    <feature type="domain" description="Transgly" evidence="13">
        <location>
            <begin position="66"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="12">
        <location>
            <begin position="204"/>
            <end position="225"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022519"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00766"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF00912"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="CTQ69322.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="243" mass="27116" checksum="2C35ACB13D0886FA" modified="2015-12-09" version="1">MPRAEAKTDKTRRSKHGILTWKGFRRRLLQLLVVLLLVPPVLTVIYSVVPPVSTLMLARYVQFLWVDRQWVPLEDISPNLIRSVIASEDGRFCISHGVDWGALREQVEALSEGERPRGASTITMQSAKNLFLWNDRSYIRKGMEIPLALMLDALLTKKRILEIYLNVAEWGEGIFGAEAAAQAWFGKPAKDLNSREAARLATALPNPLGRNPAKPSAGHQRLASKNVARVRSAGPIFECVLGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4H7</accession>
    <name>A0A0M7A4H7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02101</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69402.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671766.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02101"/>
    <dbReference type="EnsemblBacteria" id="CTQ69402">
        <property type="protein sequence ID" value="CTQ69402"/>
        <property type="gene ID" value="LAX5112_02101"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009758">
        <property type="entry name" value="DUF1326"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07040">
        <property type="entry name" value="DUF1326"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ69402.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="208" mass="22365" checksum="F53F348B289BD2D1" modified="2015-12-09" version="1">MTGWAIRGELILNCNCTVFCPCVVSLGKHAPTEGYCQAWAGVRIDEGHYMGEDLSGLNVGLVLEIPGLMARGNWKAAAYIDERASEAAYDGLLKIFSGQAKGTTGLFKVLVSEFLGAERAPVSYENEGKKRRLIVGKAIKGEVVPVGGSDPDQDIVVTNTEYWMGSDITVATATQGRVRAYGRVWDFDGRSAEICQIDWSGPAAEQAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4P4</accession>
    <name>A0A0M7A4P4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Putative hydrolase MhqD</fullName>
            <ecNumber evidence="1">3.1.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">mhqD</name>
        <name evidence="1" type="ORF">LAX5112_02123</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.-.-" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69462.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671782.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02123"/>
    <dbReference type="EnsemblBacteria" id="CTQ69462">
        <property type="protein sequence ID" value="CTQ69462"/>
        <property type="gene ID" value="LAX5112_02123"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ69462.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="201" mass="21922" checksum="A05BFDC99F1E9320" modified="2015-12-09" version="1">MPTKLYENLTKAPEPGRPLIFAFHGTGGDERQLFQLAGQLAPGAGVVSPRGDVFEGGAARFFKRTAEGVYDMEDLSRATAKMADFISAHRVLYPDSPAYGFGYSNGANILAAVFLEQPDLFDRVGLLHPLVTWEMPQDLDLSVRKVVLTAGRNDPITPWPKSARLIEDLQRAGADIETDVHDGGHELRDSELAALVRGFAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4U0</accession>
    <name>A0A0M7A4U0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Invasion protein B, involved in pathogenesis</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02356</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70098.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02356"/>
    <dbReference type="EnsemblBacteria" id="CTQ70098">
        <property type="protein sequence ID" value="CTQ70098"/>
        <property type="gene ID" value="LAX5112_02356"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038696">
        <property type="entry name" value="IalB_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010642">
        <property type="entry name" value="Invasion_prot_B"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06776">
        <property type="entry name" value="IalB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809236" evidence="1">
        <location>
            <begin position="34"/>
            <end position="183"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70098.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="183" mass="19302" checksum="2A27821053BAEFBF" modified="2015-12-09" version="1">MSTQLPQQRPKRSTLTTLPKLMAAAAICVTAFAQSLQPATAQGEIRANHGDWQMRCDTPPGATGEQCALIQNVTAADRENVGLSVIILRTADKQARILRVLAPLGVLLPSGLGLKVDGADIGRAGFVRCLPNGCIAEVILEDELLNQLKSGSQATFIIFQTPEEGIGIPISLNGFSAGFDALP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5A6</accession>
    <name>A0A0M7A5A6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL</fullName>
            <ecNumber evidence="6">2.7.8.37</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">phnL</name>
        <name evidence="6" type="ORF">LAX5112_02184</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EC" id="2.7.8.37" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69616.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671826.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02184"/>
    <dbReference type="EnsemblBacteria" id="CTQ69616">
        <property type="protein sequence ID" value="CTQ69616"/>
        <property type="gene ID" value="LAX5112_02184"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061693">
        <property type="term" value="F:alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012701">
        <property type="entry name" value="CP_lyase_PhnL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02324">
        <property type="entry name" value="CP_lyasePhnL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="5"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="44"/>
            <end position="51"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ69616.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="234" mass="25306" checksum="19293F1BA7F1B26A" modified="2015-12-09" version="1">MPVRLYLNSVGKSFTMHLQGGTVIPVVENVEFSVEAGECVVLGGPSGAGKSSILKMIYGNYRCDQGQILVTVGDEIINVADAEPRQILRLRENTIGYVSQFLRTIPRVSAEEVVAEPLVAQGTSEAEGLDTARSLLSRLNVPERLWKLPPATFSGGEQQRVNIARGFIAHYPILLLDEPTASLDAANRAVVVRLVEEKKAKGVAMVGILHDEDVRQEIADRIIDVTGFSADVAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5A8</accession>
    <name>A0A0M7A5A8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02242</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69771.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671870.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ69771">
        <property type="protein sequence ID" value="CTQ69771"/>
        <property type="gene ID" value="LAX5112_02242"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="28"/>
            <end position="46"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69771.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="86" mass="9786" checksum="9586DD4833F779C5" modified="2015-12-09" version="1">MKILWWSLAAILIVLGLATVWLPIPTGVPLLALGSVVIIGTSRSAARHLRKRRKSAPHLNDMITWVEDRSPLRFARILKRTRPRKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5J8</accession>
    <name>A0A0M7A5J8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02497</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70405.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70405">
        <property type="protein sequence ID" value="CTQ70405"/>
        <property type="gene ID" value="LAX5112_02497"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="95"/>
            <end position="128"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70405.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="128" mass="13250" checksum="C69ED5035BF6E434" modified="2015-12-09" version="1">MSTLRILRQERTPLVALTALAFAFRLILITLGTALAPTASIASDGLTSLCLTSELDPSSQGAHDPITCTCATSCPHGCAAGPCLAPAQIERFSADDPTGLNTPHRAQQAPHLSIGKSGPIRAPPVLRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5M1</accession>
    <name>A0A0M7A5M1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DUF302 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01936</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68924.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671626.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01936"/>
    <dbReference type="EnsemblBacteria" id="CTQ68924">
        <property type="protein sequence ID" value="CTQ68924"/>
        <property type="gene ID" value="LAX5112_01936"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.310.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005180">
        <property type="entry name" value="DUF302"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035923">
        <property type="entry name" value="TT1751-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03625">
        <property type="entry name" value="DUF302"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103247">
        <property type="entry name" value="SSF103247"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809137" description="DUF302 domain-containing protein" evidence="1">
        <location>
            <begin position="27"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="domain" description="DUF302" evidence="2">
        <location>
            <begin position="89"/>
            <end position="135"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF03625"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ68924.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="167" mass="17375" checksum="EBA77F6417498CD1" modified="2015-12-09" version="1">MKTGFTTAAAIAIGAFGLVGTATADAADKADAPDGVTAYSVEADFEDVRFGLENAIINRGLVIDYTSHIGDMLARTSDDVGGTKQIYANAQAMLFCSADLSRKVMEADPANIAYCPYTLFVYDTPGAEGTVTVGFRRLSETGSDASKAAIGDINTLLDAIAQEAVSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5Q3</accession>
    <name>A0A0M7A5Q3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Protein involved in cellulose biosynthesis (CelD)</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02250</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69792.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671876.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02250"/>
    <dbReference type="EnsemblBacteria" id="CTQ69792">
        <property type="protein sequence ID" value="CTQ69792"/>
        <property type="gene ID" value="LAX5112_02250"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038740">
        <property type="entry name" value="BioF2-like_GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13480">
        <property type="entry name" value="Acetyltransf_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Acetyltransf_6" evidence="1">
        <location>
            <begin position="179"/>
            <end position="295"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13480"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69792.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="375" mass="41340" checksum="4776F27E8434F5E1" modified="2015-12-09" version="1">MTDPSDRKDQLEVLWLDPLAPETPLGQWQDLADNSVDPNPFFTPGYLQPFLRAFPSATVRLLVIREKGSKNWRMTAPIGRRRAGLAVPVKTTWTSYYAPLGTPLLRDTGGLDDVAAFVEVGAGSASLMAMPFLPCNSRVASLAKKITGWENRWPEKLSRAGHGSGDLGETQYKAAMSGKRRKEMRRQLRRLEDHGPIRIAHLIGEEAIKGFEKFLKLEAEGWKGRAGTALSSNPETALFSRNVIKNRSLNNGVRIDQLWAGESLIASLILFIEGSHVFSWKIAFNETFGRMSPGAQIAAISMKQNLKSPDILEADSLAVPGHSMIEPLWRGRVDIGTLILSKGYLGSSLASLTAADLKLERSLRNKAKTLKAFFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6L0</accession>
    <name>A0A0M7A6L0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">LigB family dioxygenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">LAX5112_02090</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the DODA-type extradiol aromatic ring-opening dioxygenase family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69373.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671760.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02090"/>
    <dbReference type="EnsemblBacteria" id="CTQ69373">
        <property type="protein sequence ID" value="CTQ69373"/>
        <property type="gene ID" value="LAX5112_02090"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051213">
        <property type="term" value="F:dioxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008198">
        <property type="term" value="F:ferrous iron binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016701">
        <property type="term" value="F:oxidoreductase activity, acting on single donors with incorporation of molecular oxygen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006725">
        <property type="term" value="P:cellular aromatic compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07363">
        <property type="entry name" value="45_DOPA_Dioxygenase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014436">
        <property type="entry name" value="Extradiol_dOase_DODA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004183">
        <property type="entry name" value="Xdiol_dOase_suB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02900">
        <property type="entry name" value="LigB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006157">
        <property type="entry name" value="Doxgns_DODA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0223">Dioxygenase</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="LigB" evidence="5">
        <location>
            <begin position="26"/>
            <end position="260"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007581"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF02900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ69373.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="261" mass="28402" checksum="B69E32A1B7242670" modified="2015-12-09" version="1">MPDHQTPIPPVFFAHGAPTLAVRDTPASRFLKHFGKDMEQPRFILILSAHWETEGLKISAPGPLRTYHDFRGFPDELYEISYPASADASAVEEVVSILSAAGLDPEQDADWGLDHGAWVPLSLAFPDADIPVVQISLPNNSSPETIYALGAAVAPLSEKGVLIAGSGSTTHNLRAIGPDGSQVPAWATGFDAWLDTGLDTGQLNYFNNLEAAPDFRQNHPTEEHLLPLFFPFGAAGSGKKPELLHRSYEYGSISMSYYRFQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7A1</accession>
    <name>A0A0M7A7A1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative assembly protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02179</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69603.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671822.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02179"/>
    <dbReference type="EnsemblBacteria" id="CTQ69603">
        <property type="protein sequence ID" value="CTQ69603"/>
        <property type="gene ID" value="LAX5112_02179"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007844">
        <property type="entry name" value="AsmA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05170">
        <property type="entry name" value="AsmA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AsmA" evidence="2">
        <location>
            <begin position="4"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="domain" description="AsmA" evidence="2">
        <location>
            <begin position="510"/>
            <end position="795"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="135"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="582"/>
            <end position="610"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="950"/>
            <end position="970"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="141"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="585"/>
            <end position="599"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF05170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ69603.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="970" mass="100387" checksum="6F7AC46DF488801C" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7B0</accession>
    <name>A0A0M7A7B0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Putative phosphonate metabolism protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02183</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69613.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671825.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02183"/>
    <dbReference type="EnsemblBacteria" id="CTQ69613">
        <property type="protein sequence ID" value="CTQ69613"/>
        <property type="gene ID" value="LAX5112_02183"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009389">
        <property type="entry name" value="DUF1045"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06299">
        <property type="entry name" value="DUF1045"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF033328">
        <property type="entry name" value="Phest_Mll4975"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03223">
        <property type="entry name" value="Phn_opern_protn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ69613.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="249" mass="27775" checksum="B88A6F9E0360E62C" modified="2015-12-09" version="1">MRYAIYFAADADAPLMQLGNTWLGRDPFTGSRPQQPSIPGLDAGRFEDLTTSPRRYGFHGTLKAPFSLAKDATEEALIAACARFAETVAPFELQELSVNQLGKFLALTPAQPEPDLEAFASLCVRQFEPFRAPLSAEDLGRRRQANLTPKQDGYVETWGYPYVFDEFRFHMTLSNKLESKEEAALLARSAETHFEAVTNSAFTCRQFGLYVEPERGAPFDVHRIFELTGPQNPITALENTLANSNEEVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A806</accession>
    <name>A0A0M7A806_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02547</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70546.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70546">
        <property type="protein sequence ID" value="CTQ70546"/>
        <property type="gene ID" value="LAX5112_02547"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="67"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="74"/>
            <end position="98"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70546.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="103" mass="11345" checksum="6A71077D4171A992" modified="2015-12-09" version="1">MTSRILDDTSSALAPGQATETEMLSILTVGKNCVFSFARPYAPNRTMIAMIRLAAFGCRTRTSMMPRGSIGRAMSSPFTAQRQQIDLQAQQLRSPPVAQRSHR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8J1</accession>
    <name>A0A0M7A8J1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02336</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70053.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671960.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02336"/>
    <dbReference type="EnsemblBacteria" id="CTQ70053">
        <property type="protein sequence ID" value="CTQ70053"/>
        <property type="gene ID" value="LAX5112_02336"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="94"/>
            <end position="113"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70053.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="113" mass="12137" checksum="74C7E5013885001F" modified="2015-12-09" version="1">MPMAKGSADLETCPVTDDILKKLLDSALNATAEITGQWPAAQRAAMAVYCYRRAHLRNLGLQLAAQCEQSDLVREAGTAGEMIYLQSKAAGAATDDLKTRPRGTRPPVSLHIV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9V2</accession>
    <name>A0A0M7A9V2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DUF58 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02752</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71242.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672312.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02752"/>
    <dbReference type="EnsemblBacteria" id="CTQ71242">
        <property type="protein sequence ID" value="CTQ71242"/>
        <property type="gene ID" value="LAX5112_02752"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002881">
        <property type="entry name" value="DUF58"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036465">
        <property type="entry name" value="vWFA_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01882">
        <property type="entry name" value="DUF58"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53300">
        <property type="entry name" value="SSF53300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF58" evidence="2">
        <location>
            <begin position="68"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01882"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ71242.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="331" mass="36342" checksum="A94DD853BC33D9B3" modified="2015-12-09" version="1">MHDRAARSRSGLNAKPPAKADGTDPRIHVTLSQLRSLEGQAHGLRFLPRQPAASVFNGRHASRLRGRGLNFEELRDYLPGDDPRTIDWKVTARTGKPHVRVYSEERDRPSLILVDQRMSMFFGTRHAMKSVTAAEAAALAAFRILDQGDRVGGVIFGDEFAAEIKPKANRSARDRFLTAIVRANQMLRADAPAVDTPLSLNLPLRTAARIARRNHLVIVISDFDGVDDETASLIGRIASTNDLVLCPVTDPMAEEIPAGLKLVVSDGELQVELDTASGEIHKRLAEFSSGRLSEILNWQKKYGLPVLPLSAGEETVPQIRRLTGLTSAGRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AA30</accession>
    <name>A0A0M7AA30_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">GDP-mannose-dependent alpha-mannosyltransferase</fullName>
            <ecNumber evidence="2">2.4.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">mgtA_2</name>
        <name evidence="2" type="ORF">LAX5112_02713</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.4.1.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71090.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672267.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02713"/>
    <dbReference type="EnsemblBacteria" id="CTQ71090">
        <property type="protein sequence ID" value="CTQ71090"/>
        <property type="gene ID" value="LAX5112_02713"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016757">
        <property type="term" value="F:glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028098">
        <property type="entry name" value="Glyco_trans_4-like_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13439">
        <property type="entry name" value="Glyco_transf_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glyco_trans_4-like_N" evidence="1">
        <location>
            <begin position="15"/>
            <end position="165"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13439"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71090.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="345" mass="37979" checksum="529C00F2F4F46A13" modified="2015-12-09" version="1">MSSILVVTDAWHPQINGVVRSLERTADELRAMGVRMEFLTPQAFKTLPCPTYPEIRLSLTHKGTVRRMMDEFDCEHLHIATEGPLGLLAAGIAKKRGQPFTTSYHTRFPEYVSARMPVPLSWSYAWMRRFHNAGNGCMVATTSLENDLRDRGFRNLMRWSRGVDENLFRPYEGSVLPQDLPGPVFMYVGRVAIEKNIKAFLDLKLSGSKVVVGDGPQLDTLQREYTDTLFTGAKTGEDLARHYASADVFVFPSLTDTFGNVMLEALACGVPVAAYPVMGPLDVIGDTGAGVLSENLAEACEAALDIPRDHCRNIALNYTWAASSRQFLDNCITAVGGVAQANAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABH4</accession>
    <name>A0A0M7ABH4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Alpha/beta hydrolase family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02995</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71981.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02995"/>
    <dbReference type="EnsemblBacteria" id="CTQ71981">
        <property type="protein sequence ID" value="CTQ71981"/>
        <property type="gene ID" value="LAX5112_02995"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022742">
        <property type="entry name" value="Hydrolase_4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12146">
        <property type="entry name" value="Hydrolase_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="5"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="domain" description="Hydrolase_4" evidence="2">
        <location>
            <begin position="66"/>
            <end position="303"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF12146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ71981.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="356" mass="39559" checksum="13F999F725ED5F83" modified="2015-12-09" version="1">MQRRWVYWLTGSVFGAVMLVLGLQVLSGLDDFDLSAYEARSVSFSHQDTQISGTLHLPGVQGAPVILLVHGDGPQDRYSGGGYLPLIKVFLESGIAVYSWDKPGVGASQGNWLDHSMSDRADLAKTALSQLKTLPGLSLSSFGFLGFSQAGWVLPHLAQESEPTDFLVLIGGAVDWQRQGQYYTRQRLAADGASAEAIKSELDRQAGRNEQYLGPEAAYADYLAAQDTSSPMPEDRFHFVKKNWRSNSTETLKTAEKPMFIIHGSDDLNVDPNYNSETYRQILENQHPANRFEIIDRASHGLLRSDLFNYQRPDQMPFWAEWAFLSLGREALAPGTLDLIANWVHDQPHSASVTVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABX6</accession>
    <name>A0A0M7ABX6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Aminomethyltransferase</fullName>
            <ecNumber evidence="6">2.1.2.10</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">gcvT_9</name>
        <name evidence="6" type="ORF">LAX5112_03252</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the GcvT family.</text>
    </comment>
    <dbReference type="EC" id="2.1.2.10" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72635.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672672.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03252"/>
    <dbReference type="EnsemblBacteria" id="CTQ72635">
        <property type="protein sequence ID" value="CTQ72635"/>
        <property type="gene ID" value="LAX5112_03252"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004047">
        <property type="term" value="F:aminomethyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1360.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006076">
        <property type="entry name" value="FAD-dep_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032503">
        <property type="entry name" value="FAO_M"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013977">
        <property type="entry name" value="GCV_T_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006222">
        <property type="entry name" value="GCV_T_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029043">
        <property type="entry name" value="GcvT/YgfZ_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027266">
        <property type="entry name" value="TrmE/GcvT_dom1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01266">
        <property type="entry name" value="DAO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16350">
        <property type="entry name" value="FAO_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01571">
        <property type="entry name" value="GCV_T"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08669">
        <property type="entry name" value="GCV_T_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101790">
        <property type="entry name" value="SSF101790"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="DAO" evidence="2">
        <location>
            <begin position="7"/>
            <end position="368"/>
        </location>
    </feature>
    <feature type="domain" description="FAO_M" evidence="5">
        <location>
            <begin position="371"/>
            <end position="424"/>
        </location>
    </feature>
    <feature type="domain" description="GCV_T" evidence="3">
        <location>
            <begin position="427"/>
            <end position="697"/>
        </location>
    </feature>
    <feature type="domain" description="GCV_T_C" evidence="4">
        <location>
            <begin position="722"/>
            <end position="803"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008609"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01266"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01571"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF08669"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF16350"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ72635.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="811" mass="90040" checksum="0649B5614230BF8F" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACL4</accession>
    <name>A0A0M7ACL4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Nickel/cobalt efflux protein RcnA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">LAX5112_03092</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72192.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672691.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03092"/>
    <dbReference type="EnsemblBacteria" id="CTQ72192">
        <property type="protein sequence ID" value="CTQ72192"/>
        <property type="gene ID" value="LAX5112_03092"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015099">
        <property type="term" value="F:nickel cation transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010412">
        <property type="entry name" value="DUF1007"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011541">
        <property type="entry name" value="Ni/Co_transpt_high_affinity"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06226">
        <property type="entry name" value="DUF1007"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03824">
        <property type="entry name" value="NicO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0533">Nickel</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0732">Signal</keyword>
    <keyword evidence="4 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="9">
        <location>
            <begin position="1"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809583" evidence="9">
        <location>
            <begin position="36"/>
            <end position="637"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="360"/>
            <end position="380"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="401"/>
            <end position="426"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="438"/>
            <end position="457"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="536"/>
            <end position="558"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="564"/>
            <end position="592"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="613"/>
            <end position="636"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="486"/>
            <end position="506"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="7">
        <location>
            <begin position="487"/>
            <end position="503"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022596"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ72192.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="637" mass="67767" checksum="B11BB14B27077AB1" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACP2</accession>
    <name>A0A0M7ACP2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Inner membrane lipoprotein YiaD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">yiaD</name>
        <name evidence="5" type="ORF">LAX5112_03168</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72401.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008188981.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03168"/>
    <dbReference type="EnsemblBacteria" id="CTQ72401">
        <property type="protein sequence ID" value="CTQ72401"/>
        <property type="gene ID" value="LAX5112_03168"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd07185">
        <property type="entry name" value="OmpA_C-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006665">
        <property type="entry name" value="OmpA-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036737">
        <property type="entry name" value="OmpA-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00691">
        <property type="entry name" value="OmpA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103088">
        <property type="entry name" value="SSF103088"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51123">
        <property type="entry name" value="OMPA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="1 3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="20"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="domain" description="OmpA-like" evidence="4">
        <location>
            <begin position="217"/>
            <end position="344"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="119"/>
            <end position="167"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00473"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ72401.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="344" mass="37947" checksum="7AC5BE2C513FA341" modified="2015-12-09" version="1">MAGSLRSRRRAQQTDYWPGFVDAMATLLLVIIFLLSIFMIAQFFLSQQLSGRDTVLNRLNAQISELTELLALERASSGELEDTILGLQASLSSAEAEQSRLLGLLESSSGDAEAAGGRAAQLENLLDDERQVSQEALAQVELLNQQIAALRRQIAAANAALEASEAKEAESQAKIASLGRRLNAALVQRVQELSRYRSDFFGRLREILSQRSDISVVGDRFVFQSEVLFDSGSEDINPEGQQELDKLAEAILELSGQIPDEINWVLRVDGHTDARPLSGTGRLRNNWELSAARAISVVRYLIEKGVDPKRLVAAGFGEFQPLEESETPDALAKNRRIELKLTER</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AD09</accession>
    <name>A0A0M7AD09_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 4">Cell division topological specificity factor</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4 5" type="primary">minE</name>
        <name evidence="5" type="ORF">LAX5112_03388</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3 4">Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the MinE family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72968.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672792.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03388"/>
    <dbReference type="EnsemblBacteria" id="CTQ72968">
        <property type="protein sequence ID" value="CTQ72968"/>
        <property type="gene ID" value="LAX5112_03388"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007049">
        <property type="term" value="P:cell cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032955">
        <property type="term" value="P:regulation of division septum assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1070.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00262">
        <property type="entry name" value="MinE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005527">
        <property type="entry name" value="MinE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036707">
        <property type="entry name" value="MinE_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03776">
        <property type="entry name" value="MinE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55229">
        <property type="entry name" value="SSF55229"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01215">
        <property type="entry name" value="minE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="4 5" id="KW-0132">Cell division</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008168"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00020112"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00025265"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00262"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ72968.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="88" mass="9499" checksum="C3065C2E2326B6A1" modified="2015-12-09" version="1">MNILSLFGKRSQSASVAKNRLQILLAHERSGNSDDAALISSLREDILAVVAKRIDIDPDAVRLEMDREGDVTTLGIDIELPPSAARAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AD59</accession>
    <name>A0A0M7AD59_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="12">Lipid A export ATP-binding/permease protein MsbA</fullName>
            <ecNumber evidence="12">3.6.3.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">msbA_2</name>
        <name evidence="12" type="ORF">LAX5112_03161</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.-" evidence="12"/>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72382.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672619.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03161"/>
    <dbReference type="EnsemblBacteria" id="CTQ72382">
        <property type="protein sequence ID" value="CTQ72382"/>
        <property type="gene ID" value="LAX5112_03161"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008643">
        <property type="term" value="P:carbohydrate transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1560.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011527">
        <property type="entry name" value="ABC1_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036640">
        <property type="entry name" value="ABC1_TM_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011918">
        <property type="entry name" value="ABC_MsbA_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030260">
        <property type="entry name" value="ABCB10-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039421">
        <property type="entry name" value="Type_1_exporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24221">
        <property type="entry name" value="PTHR24221"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24221:SF553">
        <property type="entry name" value="PTHR24221:SF553"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00664">
        <property type="entry name" value="ABC_membrane"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90123">
        <property type="entry name" value="SSF90123"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02204">
        <property type="entry name" value="MsbA_rel"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50929">
        <property type="entry name" value="ABC_TM1F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 8 12" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="12" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="4 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0762">Sugar transport</keyword>
    <keyword evidence="3 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="28"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="70"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="140"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="170"/>
            <end position="188"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="252"/>
            <end position="274"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="11">
        <location>
            <begin position="31"/>
            <end position="313"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="10">
        <location>
            <begin position="348"/>
            <end position="584"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="383"/>
            <end position="390"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022597"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ72382.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="595" mass="63322" checksum="47893C90B398FAE9" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADD9</accession>
    <name>A0A0M7ADD9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Phosphotransferase enzyme family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03254</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72641.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03254"/>
    <dbReference type="EnsemblBacteria" id="CTQ72641">
        <property type="protein sequence ID" value="CTQ72641"/>
        <property type="gene ID" value="LAX5112_03254"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002575">
        <property type="entry name" value="Aminoglycoside_PTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01636">
        <property type="entry name" value="APH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="SSF56112"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="APH" evidence="1">
        <location>
            <begin position="24"/>
            <end position="218"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01636"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72641.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="302" mass="34050" checksum="D8305163B4EB8425" modified="2015-12-09" version="1">MTDAELLDFLQGRYPFGDLSGARLRPLPSSYTHRFWRLRTRERDYVIKEYFPGLENNPLYPTLPQEEATALTLLERHRLAPRLECFLDSPAGSPLVIYGYERGSEAEIDVRDAAQLLGRFAALELAPEDISMVPSGYHQVLAHADAILGKIPNSRRAANLKRLRPQDSAIKVSAAPQCTLIHRSLCLGTVQMTAAGPALIDWQYAGLGDPVEDIACFLSPGLLTLYGLKPLVLYAEDLFLEHYPDRTIVDRFLAERSAYHWRLAAYCLFRQETLTHENAPASRAYARALEEEVDLLLRLRGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADK6</accession>
    <name>A0A0M7ADK6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">UTP--glucose-1-phosphate uridylyltransferase</fullName>
            <ecNumber evidence="2">2.7.7.9</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">gtaB_1</name>
        <name evidence="2" type="ORF">LAX5112_02917</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.7.7.9" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71714.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672439.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02917"/>
    <dbReference type="EnsemblBacteria" id="CTQ71714">
        <property type="protein sequence ID" value="CTQ71714"/>
        <property type="gene ID" value="LAX5112_02917"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003983">
        <property type="term" value="F:UTP:glucose-1-phosphate uridylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009058">
        <property type="term" value="P:biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005835">
        <property type="entry name" value="NTP_transferase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00483">
        <property type="entry name" value="NTP_transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="NTP_transferase" evidence="1">
        <location>
            <begin position="11"/>
            <end position="138"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00483"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71714.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="244" mass="26717" checksum="03F106443B97547A" modified="2015-12-09" version="1">MTDTRFRPTNAMILAAGLGKRMRPLTATTPKPLIEVNGQALIDHGMDRLAAAGVKKCVVNVHYLADLVEVHVRRRQDMDIVISDERAQLLETGGGIKNALPLLGSDPFFQLNSDTCYWVEGVKPNLEHMIDAWDDSRMDALLLVAETVKAVAYAGRGDFEMARDGSLSRRPEKGVTPFAYAGAAILHPRLFEGAPDGPFSMNVLFDRAIESGRLFGVQMEGVWLHIGTPEAIRAAEYAVRESAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AE24</accession>
    <name>A0A0M7AE24_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03263</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72666.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672682.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03263"/>
    <dbReference type="EnsemblBacteria" id="CTQ72666">
        <property type="protein sequence ID" value="CTQ72666"/>
        <property type="gene ID" value="LAX5112_03263"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ72666.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="119" mass="12597" checksum="4A53C415A51DF5E8" modified="2015-12-09" version="1">MGGHFPDRLIELSGLSVFTWLMSGNAEQGAKLVCAVLPLRFKSGSASGNSIVVETENVQIVGGGSVNFKNGNLDLAFLPRAKKKQLVEIVSPFEIKGNLLDPELIVKDSGAGRAMGEVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AE56</accession>
    <name>A0A0M7AE56_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Alpha-hemolysin translocation ATP-binding protein HlyB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">hlyB</name>
        <name evidence="11" type="ORF">LAX5112_03274</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72696.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03274"/>
    <dbReference type="EnsemblBacteria" id="CTQ72696">
        <property type="protein sequence ID" value="CTQ72696"/>
        <property type="gene ID" value="LAX5112_03274"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008643">
        <property type="term" value="P:carbohydrate transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1560.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011527">
        <property type="entry name" value="ABC1_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036640">
        <property type="entry name" value="ABC1_TM_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039421">
        <property type="entry name" value="Type_1_exporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24221">
        <property type="entry name" value="PTHR24221"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00664">
        <property type="entry name" value="ABC_membrane"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90123">
        <property type="entry name" value="SSF90123"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50929">
        <property type="entry name" value="ABC_TM1F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 7 11" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="3 7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0762">Sugar transport</keyword>
    <keyword evidence="2 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="37"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="71"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="160"/>
            <end position="186"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="263"/>
            <end position="285"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="10">
        <location>
            <begin position="37"/>
            <end position="316"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="9">
        <location>
            <begin position="347"/>
            <end position="583"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022597"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ72696.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="591" mass="64402" checksum="D30D2BA986025784" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEI3</accession>
    <name>A0A0M7AEI3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Beta-lactamase 2</fullName>
            <ecNumber evidence="2">3.5.2.6</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">blm_2</name>
        <name evidence="2" type="ORF">LAX5112_03315</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.5.2.6" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72816.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672737.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03315"/>
    <dbReference type="EnsemblBacteria" id="CTQ72816">
        <property type="protein sequence ID" value="CTQ72816"/>
        <property type="gene ID" value="LAX5112_03315"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008800">
        <property type="term" value="F:beta-lactamase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.15.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001279">
        <property type="entry name" value="Metallo-B-lactamas"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036866">
        <property type="entry name" value="RibonucZ/Hydroxyglut_hydro"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00753">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00849">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56281">
        <property type="entry name" value="SSF56281"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lactamase_B" evidence="1">
        <location>
            <begin position="33"/>
            <end position="222"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72816.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="319" mass="35479" checksum="2E748FCFAE748DD0" modified="2015-12-09" version="1">MSKQFASVGDMEEKKITFEEIGKDLWAFTAEGDPNTGVIIGDDSVMIIEAQATPALANKVIEKVRSVTDKPISHLVLTHYHAVRVLGAAAYQAPNIIMSQKARSMVVERGAEDRESEFMRFPRLFMGYDDVSKIPPLTWPTTTFNDRMTVYLGKRRVDLSFLGRAHTAGDIVIHVPDENVMFTGDIVEYHSACYCGDGHFNDWPKTLEAIRAYDVEAIAPGRGDALVGREMVGKALTNTADFVTSTYKPVARVAQGGGTLKEAWDACRAECDPKFKDYAIYEHCLPFNVARAYDEALGIDTPRIWTAERDAQMWADLQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEI5</accession>
    <name>A0A0M7AEI5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Lysozyme M1</fullName>
            <ecNumber evidence="4">3.2.1.17</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">acm_2</name>
        <name evidence="4" type="ORF">LAX5112_03579</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the glycosyl hydrolase 25 family.</text>
    </comment>
    <dbReference type="EC" id="3.2.1.17" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73565.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672940.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03579"/>
    <dbReference type="EnsemblBacteria" id="CTQ73565">
        <property type="protein sequence ID" value="CTQ73565"/>
        <property type="gene ID" value="LAX5112_03579"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003796">
        <property type="term" value="F:lysozyme activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016998">
        <property type="term" value="P:cell wall macromolecule catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009253">
        <property type="term" value="P:peptidoglycan catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002053">
        <property type="entry name" value="Glyco_hydro_25"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018077">
        <property type="entry name" value="Glyco_hydro_fam25_subgr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01183">
        <property type="entry name" value="Glyco_hydro_25"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00641">
        <property type="entry name" value="Glyco_25"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51904">
        <property type="entry name" value="GLYCOSYL_HYDROL_F25_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="2 4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010646"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ73565.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="210" mass="22758" checksum="56545486EE37671E" modified="2015-12-09" version="1">MGTTGGRGIDVSHYQGTVNWAGVAADGTEFAMIKASEGESSPDPMFLSNWAGCKNNSVKCGAYHYFLPTDCFLKQADLLIQQLRSAGYDPSADLPPAIDCEDMEGVSASTYVYALKELLQSLKTQLKCTPMIYVSPAFWQGLGSPDFSDYPLWVANYTTASAPNIPWPWKTYAIWQYSDDGTVGGIAGDVDLDLSNPAAGVSPEPKLNWF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFA8</accession>
    <name>A0A0M7AFA8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">OpgC protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03584</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73579.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672943.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03584"/>
    <dbReference type="EnsemblBacteria" id="CTQ73579">
        <property type="protein sequence ID" value="CTQ73579"/>
        <property type="gene ID" value="LAX5112_03584"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014550">
        <property type="entry name" value="UCP028704_OpgC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38592">
        <property type="entry name" value="PTHR38592"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10129">
        <property type="entry name" value="OpgC_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF028704">
        <property type="entry name" value="UPC028704"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="66"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="105"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="133"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="186"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="216"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="264"/>
            <end position="281"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="310"/>
            <end position="330"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="336"/>
            <end position="357"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="365"/>
            <end position="403"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ73579.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="403" mass="45462" checksum="ABDEE30EAEF04491" modified="2015-12-09" version="1">MFIIYIAHVPWNWWTLWIPARFGFSDATEMFVFCSGMASALAFGKIFDLHGLGIGAARILHRMWQVYWAHIGQLLVIAVGLVMVHESGYLQSCCGLTQDYVVSLNLWHLFNNTAVALPGIMTLTWVPNYFDILPMYIVILALIPVIMLASRISVEAAFAVSISLWLASQFDLLSLPAEPWSDREWFFNPFAWQLLFFTGFAFMRGWIPAPPVNAKLLILCTVIVLATVPFAYFRVYGEAHLNWVWAREVREFIRPLWVKTEFGFLRYMHFLALAYLAWAAAGEHGKYLLGHGKVWGGFVRVVQKVGQQSLAVFMASLVVAQAAAILRDMVWGRGEWIPQILSNLLGFAALIAVAYVVSWYKSEPWRKPPGKATLQPEFTRQPSKPSAAGDGSHTAKDAEKLLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFG2</accession>
    <name>A0A0M7AFG2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA</fullName>
            <ecNumber evidence="3">3.1.4.17</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">cpdA_3</name>
        <name evidence="3" type="ORF">LAX5112_03513</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the cyclic nucleotide phosphodiesterase class-III family.</text>
    </comment>
    <dbReference type="EC" id="3.1.4.17" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73351.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672886.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03513"/>
    <dbReference type="EnsemblBacteria" id="CTQ73351">
        <property type="protein sequence ID" value="CTQ73351"/>
        <property type="gene ID" value="LAX5112_03513"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004115">
        <property type="term" value="F:3',5'-cyclic-AMP phosphodiesterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd07402">
        <property type="entry name" value="MPP_GpdQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.21.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004843">
        <property type="entry name" value="Calcineurin-like_PHP_ApaH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026575">
        <property type="entry name" value="GpdQ/CpdA-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029052">
        <property type="entry name" value="Metallo-depent_PP-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00149">
        <property type="entry name" value="Metallophos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56300">
        <property type="entry name" value="SSF56300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Metallophos" evidence="2">
        <location>
            <begin position="1"/>
            <end position="193"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00025742"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00149"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ73351.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="274" mass="30345" checksum="51CE99A6BB5D2446" modified="2015-12-09" version="1">MKLLQLTDIHLTKPGDTIAGRDPNENFRKALGHAVTHHPDAEAIFITGDLSDWGDKDDYLRLKAEIAECPLPIHLCIGNHDERDVFLSVFPEGADENGFVQAIVPLSEGTAILLDTWGPDTHAGFYCSKRQDWLDRELSKATGPVFLFMHHNPVPIGIAPMDKIMLQDADGFGQVVARHAAKIRHIFHGHCHLPLAGSLHDIPFSAPRGTNHAGWPDFANKGNLAGSDLPESYAVVLAEETSTMIHMIEYGYEGTVRREGSPDYADWDRLTMVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFT6</accession>
    <name>A0A0M7AFT6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Electron transfer flavoprotein large subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">etfA</name>
        <name evidence="7" type="ORF">LAX5112_03728</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ETF alpha-subunit/FixB family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74015.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673060.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03728"/>
    <dbReference type="EnsemblBacteria" id="CTQ74015">
        <property type="protein sequence ID" value="CTQ74015"/>
        <property type="gene ID" value="LAX5112_03728"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01715">
        <property type="entry name" value="ETF_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029035">
        <property type="entry name" value="DHS-like_NAD/FAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014730">
        <property type="entry name" value="ETF_a/b_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001308">
        <property type="entry name" value="ETF_a/FixB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033947">
        <property type="entry name" value="ETF_alpha_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014731">
        <property type="entry name" value="ETF_asu_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018206">
        <property type="entry name" value="ETF_asu_C_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43153">
        <property type="entry name" value="PTHR43153"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01012">
        <property type="entry name" value="ETF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00766">
        <property type="entry name" value="ETF_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000089">
        <property type="entry name" value="Electra_flavoP_a"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00893">
        <property type="entry name" value="ETF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52467">
        <property type="entry name" value="SSF52467"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00696">
        <property type="entry name" value="ETF_ALPHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0249">Electron transport</keyword>
    <keyword evidence="4" id="KW-0274">FAD</keyword>
    <keyword evidence="3" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ETF" evidence="6">
        <location>
            <begin position="3"/>
            <end position="181"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005817"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM00893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ74015.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="310" mass="31353" checksum="07269E9619BB058D" modified="2015-12-09" version="1">MTTLLVAEHAGGALNDATSKAMTAAAALGSDVHVLVAGKGVQGVAEAAAKLSGAAKVLVAESDALEHQLAEPTADLIVGLAGDYDAIVAPATANGKNTLPRVAALLDVMQISDVTAVIDSDTFERPIYAGNAIQTVKSGDAKKVITVRTSTFAAAEEGGSAAIETVAGTDGSGLSEFVGEELSKSDRPELTSAKIIISGGRALGSEEKFQEVIMPVADALGAAVGASRAAVDAGYAPNDWQVGQTGKVVAPDLYIACGISGAIQHLAGMKDSKVIVAINKDEEAPIFQVADYGLVADLFDVLPDLKAAVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGG9</accession>
    <name>A0A0M7AGG9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03626</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73691.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03626"/>
    <dbReference type="EnsemblBacteria" id="CTQ73691">
        <property type="protein sequence ID" value="CTQ73691"/>
        <property type="gene ID" value="LAX5112_03626"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809473" evidence="1">
        <location>
            <begin position="41"/>
            <end position="722"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73691.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="722" mass="77503" checksum="C5B45FEF2E0D2D7C" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGT0</accession>
    <name>A0A0M7AGT0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Phosphoserine phosphatase-like hydrolase, archaeal</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03601</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73626.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ73626">
        <property type="protein sequence ID" value="CTQ73626"/>
        <property type="gene ID" value="LAX5112_03601"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ73626.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="249" mass="28235" checksum="6B12F454722A19FF" modified="2015-12-09" version="1">MFMEFYADNRGKKAGVTLAKSSPLLSFETRAVVFDFDGTITLPKNGRTTWEMIWEYLGYDINECAEYHSQFRRNVISHQEWCEITLGKFRAKGFSDTNIEQVVASLDIVDGFAEVVEELSARNIRLDILSGSIRQIIRKSLGDAALEFQQIKANEMHFDAKSGLVSKIVGTTYDFEGKAKYMRQLVTELGCSPMDVLFIGNAGNDSWVSQSGVRTLCVNPTSTDADNAKMWWQSIREMKDMREILPYCT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AH11</accession>
    <name>A0A0M7AH11_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Pyrimidine monooxygenase RutA</fullName>
            <ecNumber evidence="2">1.14.99.46</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">rutA</name>
        <name evidence="2" type="ORF">LAX5112_03676</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.14.99.46" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ73871.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673023.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ73871">
        <property type="protein sequence ID" value="CTQ73871"/>
        <property type="gene ID" value="LAX5112_03676"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004497">
        <property type="term" value="F:monooxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016705">
        <property type="term" value="F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011251">
        <property type="entry name" value="Luciferase-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036661">
        <property type="entry name" value="Luciferase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020020">
        <property type="entry name" value="Luciferase-type_oxidoreductase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00296">
        <property type="entry name" value="Bac_luciferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51679">
        <property type="entry name" value="SSF51679"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03571">
        <property type="entry name" value="lucif_BA3436"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0503">Monooxygenase</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Bac_luciferase" evidence="1">
        <location>
            <begin position="26"/>
            <end position="246"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00296"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73871.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="322" mass="35152" checksum="3C4D02FE149CEBCB" modified="2015-12-09" version="1">MLKRTSDGGFQSLNTAYNATFRQNRMSIGLVVPIENYANSAVPTMQDHLDRVELAEKLGFAAVWLRDVPFDVPSFGDAGQTFDPFVYLGTLAAVTDRIALGVSSIILPLRHPAHVAKAAATVDVLSGGRLLLGIASGDRPAEFPALNVSFETRGNAFRESYDYIRRMADPAPAFNSPLGAPSGGMNMLPKPVADRLPILITGGSQQEPDWIAHNADGWMTYPRNVSHQAEVIEDYRRRVAAAGLADKPVMQPLYVDLLEDKDAPPQPIHLGFRSGVRALNRYLGSLEEIGVNHVALNLRFNQANTENTLARLADELLPNFHA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AH73</accession>
    <name>A0A0M7AH73_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Cobalt-precorrin-5B C(1)-methyltransferase</fullName>
            <ecNumber evidence="5">2.1.1.195</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Cobalt-precorrin-6A synthase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5" type="primary">cbiD</name>
        <name evidence="6" type="ORF">LAX5112_03652</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>Co-precorrin-5B + S-adenosyl-L-methionine = Co-precorrin-6A + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:26285"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:60063"/>
            <dbReference type="ChEBI" id="CHEBI:60064"/>
            <dbReference type="EC" id="2.1.1.195"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="5">Cofactor biosynthesis; adenosylcobalamin biosynthesis; cob(II)yrinate a,c-diamide from sirohydrochlorin (anaerobic route): step 6/10.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the CbiD family.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.195" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73772.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672995.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03652"/>
    <dbReference type="EnsemblBacteria" id="CTQ73772">
        <property type="protein sequence ID" value="CTQ73772"/>
        <property type="gene ID" value="LAX5112_03652"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00148">
        <property type="reaction ID" value="UER00227"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043780">
        <property type="term" value="F:cobalt-precorrin-5B C1-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009236">
        <property type="term" value="P:cobalamin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046140">
        <property type="term" value="P:corrin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.2110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00787">
        <property type="entry name" value="CbiD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002748">
        <property type="entry name" value="CbiD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036074">
        <property type="entry name" value="CbiD_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35863">
        <property type="entry name" value="PTHR35863"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01888">
        <property type="entry name" value="CbiD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF026782">
        <property type="entry name" value="CbiD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF111342">
        <property type="entry name" value="SSF111342"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00312">
        <property type="entry name" value="cbiD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 5" id="KW-0169">Cobalamin biosynthesis</keyword>
    <keyword evidence="2 5" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="3 5" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022573"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00787"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ73772.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="364" mass="37834" checksum="2E68FCDC7341331D" modified="2015-12-09" version="1">MVRPDGKELRRGWTTGACATAAAKAAYHALLTGTFPDPVEITLPQGRTTDFVLTRHALADGCSSATITKDAGDDPDVTHGAEITSTVRLLPEGSGVQFKAGAGVGTVTRPGLPIPPGEPAINPVPRQMLQTAIGEVTHLHGGTGDVEIEISIAGGEELALKTMNPRLGIVGGLSVLGTTGIVRPFSCAAWIASIHRGIDVARATGLEHVVGATGAMSEKAVQSRHDLDDSAYLDMGDFAGGLLKYMRSHPVPKITMAGGFAKFTKLAQGALDLHSARSSVSFEFLKDLLAETGAPAGLIDRAGTSNTAKEVLDMAAAEGFNLSAPLAMRAKTAVRTVLRDAPIDLEVLIVDRQGNIIGECGFDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHQ0</accession>
    <name>A0A0M7AHQ0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6 8">Citrate synthase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">gltA_2</name>
        <name evidence="10" type="ORF">LAX5112_03438</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 8">
            <text>acetyl-CoA + H2O + oxaloacetate = citrate + CoA + H(+)</text>
            <dbReference type="Rhea" id="RHEA:16845"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16452"/>
            <dbReference type="ChEBI" id="CHEBI:16947"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57288"/>
            <dbReference type="EC" id="2.3.3.16"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 8">Carbohydrate metabolism; tricarboxylic acid cycle; isocitrate from oxaloacetate: step 1/2.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 6 9">Belongs to the citrate synthase family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73144.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672845.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03438"/>
    <dbReference type="EnsemblBacteria" id="CTQ73144">
        <property type="protein sequence ID" value="CTQ73144"/>
        <property type="gene ID" value="LAX5112_03438"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00223">
        <property type="reaction ID" value="UER00717"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004108">
        <property type="term" value="F:citrate (Si)-synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006099">
        <property type="term" value="P:tricarboxylic acid cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd06114">
        <property type="entry name" value="EcCS_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.580.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016142">
        <property type="entry name" value="Citrate_synth-like_lrg_a-sub"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016143">
        <property type="entry name" value="Citrate_synth-like_sm_a-sub"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002020">
        <property type="entry name" value="Citrate_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019810">
        <property type="entry name" value="Citrate_synthase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024176">
        <property type="entry name" value="Citrate_synthase_bac-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036969">
        <property type="entry name" value="Citrate_synthase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010953">
        <property type="entry name" value="Citrate_synthase_typ-I"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00285">
        <property type="entry name" value="Citrate_synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001369">
        <property type="entry name" value="Citrate_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00143">
        <property type="entry name" value="CITRTSNTHASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48256">
        <property type="entry name" value="SSF48256"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01798">
        <property type="entry name" value="cit_synth_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00480">
        <property type="entry name" value="CITRATE_SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 6 8" id="KW-0808">Transferase</keyword>
    <keyword evidence="4 8" id="KW-0816">Tricarboxylic acid cycle</keyword>
    <feature type="active site" evidence="7">
        <location>
            <position position="306"/>
        </location>
    </feature>
    <feature type="active site" evidence="7">
        <location>
            <position position="364"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000308"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004751"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010566"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022532"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRNR" id="PIRNR001369"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR001369-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU003370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU003406"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ73144.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="430" mass="48129" checksum="2169ADACAC5978DA" modified="2015-12-09" version="1">MADNNAKLNVGGNDHDFDVLDGSIGPSVVNISSLYKDTGMFTYDPGFTSTASCESKITYIDGDEGTLLYRGYPIEQLADHGDFLESCYLLLYGELPTKTQKDDFVTRVTYHTMIHEQMNRFYSGFRRDAHPMAILCGTVGALSAFYHDSTDISDPHQRMVASLRMIAKLPTMAAMAYKYHVGQPFVYPRNDLGYAANFLHMCFAVPCEEYKVNPVLARAMDRIFILHADHEQNASTSTVRLAGSSGANPFACIAAGIACLWGPAHGGANEAALNMLSEIGSVDRIPEFVARAKDKNDPFRLMGFGHRVYKNYDPRAKIMQKTCHEVLGELGIKDDPLLDIAMELEKIALNDPYFVEKKLYPNIDFYSGITLRALGFPTTMFTVLFALARTVGWIAQWKEMVEDPSQRIGRPRQLYTGATKRDYVPIDQRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHR7</accession>
    <name>A0A0M7AHR7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Glucose--fructose oxidoreductase</fullName>
            <ecNumber evidence="3">1.1.99.28</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">gfo</name>
        <name evidence="3" type="ORF">LAX5112_03937</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.1.99.28" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74685.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673244.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03937"/>
    <dbReference type="EnsemblBacteria" id="CTQ74685">
        <property type="protein sequence ID" value="CTQ74685"/>
        <property type="gene ID" value="LAX5112_03937"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047061">
        <property type="term" value="F:glucose-fructose oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004104">
        <property type="entry name" value="Gfo/Idh/MocA-like_OxRdtase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000683">
        <property type="entry name" value="Gfo/Idh/MocA-like_OxRdtase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01408">
        <property type="entry name" value="GFO_IDH_MocA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02894">
        <property type="entry name" value="GFO_IDH_MocA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GFO_IDH_MocA" evidence="1">
        <location>
            <begin position="7"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="domain" description="GFO_IDH_MocA_C" evidence="2">
        <location>
            <begin position="137"/>
            <end position="335"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01408"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02894"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ74685.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="339" mass="36713" checksum="1FD2B65B0C8A712B" modified="2015-12-09" version="1">MSGAKQIRWGVLSTAKIGREKVIPGIMSSRTGHVAAIASRGLERAQHAANQLGIAKAYGTYEDLLADPDIDAIYNPLPNHLHVPLTLQAADAGKHVLCEKPVALNAGEARQLLSAQEGRLIAEAFMVRAHPQWIRARDLVRSGDLGELKAIQGFFSYFNADPANIRNNADIGGGALLDIGCYTMLAGRYFFDAEPQRVVAMIDRDPEFETDRTTSAMLDFRQGRHLSFTVSTQLTPHQRFQLVGTKKRLELLIPVNAPQGGATELRLDGGSKLGDGSAVTETIAPCDQYAEMADVFGRAILGETPLPYGVEDAIQNMTILDALFQSAKEGGWVSLSQST</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHW4</accession>
    <name>A0A0M7AHW4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Phosphatidate cytidylyltransferase</fullName>
            <ecNumber evidence="7">2.7.7.41</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">cdsA_2</name>
        <name evidence="9" type="ORF">LAX5112_03459</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>a 1,2-diacyl-sn-glycero-3-phosphate + CTP + H(+) = a CDP-1,2-diacyl-sn-glycerol + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:16229"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:37563"/>
            <dbReference type="ChEBI" id="CHEBI:58332"/>
            <dbReference type="ChEBI" id="CHEBI:58608"/>
            <dbReference type="EC" id="2.7.7.41"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="7">Phospholipid metabolism; CDP-diacylglycerol biosynthesis; CDP-diacylglycerol from sn-glycerol 3-phosphate: step 3/3.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the CDS family.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.41" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73204.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672859.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03459"/>
    <dbReference type="EnsemblBacteria" id="CTQ73204">
        <property type="protein sequence ID" value="CTQ73204"/>
        <property type="gene ID" value="LAX5112_03459"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00557">
        <property type="reaction ID" value="UER00614"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004605">
        <property type="term" value="F:phosphatidate cytidylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016024">
        <property type="term" value="P:CDP-diacylglycerol biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000374">
        <property type="entry name" value="PC_trans"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01315">
        <property type="entry name" value="CDS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="7 9" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7 9" id="KW-0808">Transferase</keyword>
    <keyword evidence="4 7 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="20"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="89"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="136"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="176"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="252"/>
            <end position="271"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010185"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003938"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ73204.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="280" mass="28842" checksum="F3505DCE8F82D58D" modified="2015-12-09" version="1">MPDQHLPAKTKSNLQLRVLSAAVLGPLVLGLIYLGGWAYAVLVLAAAILFLSEWFTITGTKQTSVPAIAGQVALVGACGLKLFGFHVEGLLVVAAGAAATLVLSGFSREGRWGAEGIVYSGLALTALLSLRAGTGGLVFTFFLFFVVWATDIFAYFTGRAIGGPKLWARVSPKKTWSGAIGGLTIAIVFGVGVAAVSGASQLLTWAVLAAILSIASQAGDLLESAIKRRFDVKDSSQLIPGHGGIMDRIDGLVAAAIFAVLIGLVAGGTFADPLNSLALF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AI32</accession>
    <name>A0A0M7AI32_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Orotidine 5'-phosphate decarboxylase</fullName>
            <ecNumber evidence="7">4.1.1.23</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">OMP decarboxylase</fullName>
            <shortName evidence="7">OMPDCase</shortName>
            <shortName evidence="7">OMPdecase</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7 10" type="primary">pyrF</name>
        <name evidence="10" type="ORF">LAX5112_03812</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2 7">Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 7 8">
            <text>H(+) + orotidine 5'-phosphate = CO2 + UMP</text>
            <dbReference type="Rhea" id="RHEA:11596"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:57538"/>
            <dbReference type="ChEBI" id="CHEBI:57865"/>
            <dbReference type="EC" id="4.1.1.23"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3 7 8">Pyrimidine metabolism; UMP biosynthesis via de novo pathway; UMP from orotate: step 2/2.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the OMP decarboxylase family. Type 1 subfamily.</text>
    </comment>
    <dbReference type="EC" id="4.1.1.23" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74251.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673119.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03812"/>
    <dbReference type="EnsemblBacteria" id="CTQ74251">
        <property type="protein sequence ID" value="CTQ74251"/>
        <property type="gene ID" value="LAX5112_03812"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00070">
        <property type="reaction ID" value="UER00120"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004590">
        <property type="term" value="F:orotidine-5'-phosphate decarboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006207">
        <property type="term" value="P:'de novo' pyrimidine nucleobase biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044205">
        <property type="term" value="P:'de novo' UMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01200_B">
        <property type="entry name" value="OMPdecase_type1_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014732">
        <property type="entry name" value="OMPdecase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018089">
        <property type="entry name" value="OMPdecase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001754">
        <property type="entry name" value="OMPdeCOase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011060">
        <property type="entry name" value="RibuloseP-bd_barrel"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32119:SF2">
        <property type="entry name" value="PTHR32119:SF2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00215">
        <property type="entry name" value="OMPdecase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00934">
        <property type="entry name" value="OMPdecase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51366">
        <property type="entry name" value="SSF51366"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01740">
        <property type="entry name" value="pyrF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00156">
        <property type="entry name" value="OMPDECASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7 8" id="KW-0210">Decarboxylase</keyword>
    <keyword evidence="6 7 8" id="KW-0456">Lyase</keyword>
    <keyword evidence="5 7 8" id="KW-0665">Pyrimidine biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="OMPdecase" evidence="9">
        <location>
            <begin position="14"/>
            <end position="233"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="7">
        <location>
            <begin position="69"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="7">
        <location>
            <position position="71"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="20"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="42"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="127"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="188"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="197"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="217"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="218"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001419"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00002356"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004861"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022793"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01200"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU000512"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="SMART" id="SM00934"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ74251.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="241" mass="25477" checksum="90B246509F74B704" modified="2015-12-09" version="1">MPTSRFAPKTALERLMLPLDVPTVAEAEALVKQTEGAVGVYKIGMELQFAGGLEFARELAESGHKIFLDVKLHDIDNTITKAVRNVAKMGMTFMTVHAYPKTMRAALKGLMEEGNPDLCILGVTVLTSMDEADLVAAGYTGPIADIVEARARDAKRAGMGGIVCAPTEAENMRKILGDELVIVTPGIRPAGSAAGDQRRVMTPADAITAGSDYLVVGRPISKADDPRAAAEAVVQEISSAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIK5</accession>
    <name>A0A0M7AIK5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">4-hydroxythreonine-4-phosphate dehydrogenase</fullName>
            <ecNumber evidence="4">1.1.1.262</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">4-(phosphohydroxy)-L-threonine dehydrogenase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5" type="primary">pdxA1</name>
        <name evidence="4" type="synonym">pdxA</name>
        <name evidence="5" type="ORF">LAX5112_03875</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L-threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>4-(phosphooxy)-L-threonine + NAD(+) = 3-amino-2-oxopropyl phosphate + CO2 + NADH</text>
            <dbReference type="Rhea" id="RHEA:32275"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:57279"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:58452"/>
            <dbReference type="EC" id="1.1.1.262"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="4">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <cofactor evidence="4">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <cofactor evidence="4">
            <name>Co(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:48828"/>
        </cofactor>
        <text evidence="4">Binds 1 divalent metal cation per subunit. Can use ions such as Zn(2+), Mg(2+) or Co(2+).</text>
    </comment>
    <comment type="pathway">
        <text evidence="4">Cofactor biosynthesis; pyridoxine 5'-phosphate biosynthesis; pyridoxine 5'-phosphate from D-erythrose 4-phosphate: step 4/5.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="miscellaneous">
        <text evidence="4">The active site is located at the dimer interface.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the PdxA family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.262" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74477.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03875"/>
    <dbReference type="EnsemblBacteria" id="CTQ74477">
        <property type="protein sequence ID" value="CTQ74477"/>
        <property type="gene ID" value="LAX5112_03875"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00244">
        <property type="reaction ID" value="UER00312"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050570">
        <property type="term" value="F:4-hydroxythreonine-4-phosphate dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050897">
        <property type="term" value="F:cobalt ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042823">
        <property type="term" value="P:pyridoxal phosphate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008615">
        <property type="term" value="P:pyridoxine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00536">
        <property type="entry name" value="PdxA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037510">
        <property type="entry name" value="PdxA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005255">
        <property type="entry name" value="PdxA_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30004">
        <property type="entry name" value="PTHR30004"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04166">
        <property type="entry name" value="PdxA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00557">
        <property type="entry name" value="pdxA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0170">Cobalt</keyword>
    <keyword evidence="1 4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4" id="KW-0460">Magnesium</keyword>
    <keyword evidence="2 4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-0520">NAD</keyword>
    <keyword evidence="4" id="KW-0521">NADP</keyword>
    <keyword evidence="3 4 5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-0664">Pyridoxine biosynthesis</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <feature type="binding site" evidence="4">
        <location>
            <position position="144"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="145"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="180"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
            <note>ligand shared between dimeric partners</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="225"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
            <note>ligand shared between dimeric partners</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="280"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
            <note>ligand shared between dimeric partners</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="288"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="297"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="306"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00536"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ74477.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="344" mass="36839" checksum="A69AD2B2DB89589D" modified="2015-12-09" version="1">MPRSKMRSSGKPVAITLGEPAGIGPDLTLQAWFNRRKLGLPPFYVRGDLQLLSQRAEKLELPVHFESCSPDQASDRFSHALPVVQTGPSLTDMPGEEDPAAATSVINSIEACVQDVFDGVAIGVVTNPINKAALYRAGFKHPGHTEFLGALAEEFWPGQPSKPVMMIAGPDLMVVPVTIHVPLSAVPQQLTEDLIVETAQIVANDMTSRFGFKNPRLALCGLNPHAGENGALGTEDQDIIVPAVERLKAMGIAASGPHPADTMFHPEARLKYDCALGMYHDQVLVPAKTIGFDDSVNVTLGLPFIRTSPDHGTAYTLAGTGMARIDSFCAAIRMTHALAHPETL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJ14</accession>
    <name>A0A0M7AJ14_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Ribonuclease D</fullName>
            <shortName evidence="4">RNase D</shortName>
            <ecNumber evidence="4">3.1.13.5</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">rnd_2</name>
        <name evidence="4" type="synonym">rnd</name>
        <name evidence="6" type="ORF">LAX5112_03906</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>Exonucleolytic cleavage that removes extra residues from the 3'-terminus of tRNA to produce 5'-mononucleotides.</text>
            <dbReference type="EC" id="3.1.13.5"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="4">
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the RNase D family.</text>
    </comment>
    <dbReference type="EC" id="3.1.13.5" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74571.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673209.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03906"/>
    <dbReference type="EnsemblBacteria" id="CTQ74571">
        <property type="protein sequence ID" value="CTQ74571"/>
        <property type="gene ID" value="LAX5112_03906"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008408">
        <property type="term" value="F:3'-5' exonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033890">
        <property type="term" value="F:ribonuclease D activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042780">
        <property type="term" value="P:tRNA 3'-end processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01899">
        <property type="entry name" value="RNase_D"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002562">
        <property type="entry name" value="3'-5'_exonuclease_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010997">
        <property type="entry name" value="HRDC-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002121">
        <property type="entry name" value="HRDC_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044876">
        <property type="entry name" value="HRDC_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006292">
        <property type="entry name" value="RNase_D"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01612">
        <property type="entry name" value="DNA_pol_A_exo1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00570">
        <property type="entry name" value="HRDC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00474">
        <property type="entry name" value="35EXOc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00341">
        <property type="entry name" value="HRDC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47819">
        <property type="entry name" value="SSF47819"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01388">
        <property type="entry name" value="rnd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50967">
        <property type="entry name" value="HRDC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 4" id="KW-0269">Exonuclease</keyword>
    <keyword evidence="4 6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0540">Nuclease</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="HRDC" evidence="5">
        <location>
            <begin position="208"/>
            <end position="289"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022839"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ74571.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="392" mass="43910" checksum="206F60905C87755B" modified="2015-12-09" version="1">MEVITKTKDLAAACQRLATNDYVTVDTEFLRETTFWPKLCVIQMAGTDMAFIVDALAEGLDLEPFFDLMRDDSVTKVFHAARQDIEIIYHLGGLIPAPLFDTQVAAMVCGFGDSISYDQLVYKVTGARIDKSSRFTDWARRPLTAKQLDYALADVTHLRDAFQFLKANLAEQNRTHWVQDEMTVLTSVATYRTDPDQAWKRLKLRVRKPVELAVMMEVAAWRETEAQNRDVPRSRVIKDDAIYELAAQQPVTTEALGRLRTIPRGFERSRNADEILKAVRRALEIPKSELPKLPKGRQAPDGSAAAVDLLKVLLKLVSEAHGVAAKVIATVDDLEKIAADDNADVAAMKGWRRELFGETALKLKRGEVALAFQNRQITVLEQTPQQATQAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJA6</accession>
    <name>A0A0M7AJA6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03890</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74522.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673195.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03890"/>
    <dbReference type="EnsemblBacteria" id="CTQ74522">
        <property type="protein sequence ID" value="CTQ74522"/>
        <property type="gene ID" value="LAX5112_03890"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025644">
        <property type="entry name" value="DUF4344"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14247">
        <property type="entry name" value="DUF4344"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ74522.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="291" mass="32074" checksum="5A8BAB288FBD6443" modified="2015-12-09" version="1">MRHVLTRFRPLLRTSLSAAGLVLLGSFAAIASIDNVRANSFASQDARLSELPSEDLEDLLVFVGGNALFAAYHEAGHMLVSELSIPVLGQEEDAVDNLATLSMLAADNDETDLLLINAMIGWFLVASFGSDDLIFYGEHDLDEQRGYRILCLMVGADEDAFLDLARDLDLPEERIETCAFDYEQTADSWEAVTDPYLREGDTPAGRIKVVHDAAPSGLESVALFLREAEILEQVADELDTFYNLPEPVTFRASSCGVENAFWDPDTREVILCHEFLGGLAELYLADLTFDN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AK13</accession>
    <name>A0A0M7AK13_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Neu5Ac permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">siaT_22</name>
        <name evidence="5" type="ORF">LAX5112_03958</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74746.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673259.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03958"/>
    <dbReference type="EnsemblBacteria" id="CTQ74746">
        <property type="protein sequence ID" value="CTQ74746"/>
        <property type="gene ID" value="LAX5112_03958"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010656">
        <property type="entry name" value="DctM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004681">
        <property type="entry name" value="TRAP_DctM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33362">
        <property type="entry name" value="PTHR33362"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06808">
        <property type="entry name" value="DctM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006066">
        <property type="entry name" value="HI0050"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00786">
        <property type="entry name" value="dctM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="5"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="27"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="60"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="101"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="141"/>
            <end position="169"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="175"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="223"/>
            <end position="243"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="249"/>
            <end position="267"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="279"/>
            <end position="300"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="312"/>
            <end position="334"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="341"/>
            <end position="360"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="380"/>
            <end position="410"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="422"/>
            <end position="446"/>
        </location>
    </feature>
    <feature type="domain" description="DctM" evidence="4">
        <location>
            <begin position="12"/>
            <end position="442"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF06808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ74746.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="451" mass="47246" checksum="4D97758EFF02AF3A" modified="2015-12-09" version="1">MADAVVLGVGGLVALIILIAIRMPIAYAMILVGGVGTMLLNGPALVFSQLKTLAYGQFSIYDLSVVPMFVLMGAIASKTGLSQALFRGANAWLGWLRGGTAMAAIAGCAGFGAVCGSSLATASTMGKVALPELRRYKYSGALATGTLAAGGVLGILIPPSVVLIIYAIIVEANIVTMFMAAFLPGLLAVVLFLLTIAVYVAIKPEAGPKGGMPDRREFIEATAGMIPVLLIFALVIGGIYFGFFNPTPAAAAGVFLVLVFGLLQRKLSWPDMLGALKETAATSGMIYLIILGAELLKIFMSRVRLPQETAAWIAGSGLEPMTVLILLLVALILLGCLMDSLSMILLVIPFFWPVLVEINGGIYQGADGAGFGMSTEDLKIWFGILALIVVELGLITPPVGMNVFVISSLARDTPMIETFKGVAPFFGAELVRVVLLVSFPALTLWLPSVLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AK74</accession>
    <name>A0A0M7AK74_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04277</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75528.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75528">
        <property type="protein sequence ID" value="CTQ75528"/>
        <property type="gene ID" value="LAX5112_04277"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ75528.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="127" mass="14441" checksum="78DFAAE4CD6A2D2B" modified="2015-12-09" version="1">METEVKINPSQVIEDLNHAIKSRDPNPLLANCKSIQEYCSDFLGDGTVHYGMDAETNLSEDINKFCASDLTLEIEYVDRLSEEERTSWLVKYHINDNKSTVIGQIYISTSGPSVYRFYMMSSAPFES</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AK77</accession>
    <name>A0A0M7AK77_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">3-oxoacyl-[acyl-carrier-protein] synthase 1</fullName>
            <ecNumber evidence="4">2.3.1.41</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">fabB</name>
        <name evidence="4" type="ORF">LAX5112_03788</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.41" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74183.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673104.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03788"/>
    <dbReference type="EnsemblBacteria" id="CTQ74183">
        <property type="protein sequence ID" value="CTQ74183"/>
        <property type="gene ID" value="LAX5112_03788"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004315">
        <property type="term" value="F:3-oxoacyl-[acyl-carrier-protein] synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006633">
        <property type="term" value="P:fatty acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00834">
        <property type="entry name" value="KAS_I_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.47.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000794">
        <property type="entry name" value="Beta-ketoacyl_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018201">
        <property type="entry name" value="Ketoacyl_synth_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014031">
        <property type="entry name" value="Ketoacyl_synth_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014030">
        <property type="entry name" value="Ketoacyl_synth_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020841">
        <property type="entry name" value="PKS_Beta-ketoAc_synthase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016039">
        <property type="entry name" value="Thiolase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11712">
        <property type="entry name" value="PTHR11712"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00109">
        <property type="entry name" value="ketoacyl-synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02801">
        <property type="entry name" value="Ketoacyl-synt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00825">
        <property type="entry name" value="PKS_KS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53901">
        <property type="entry name" value="SSF53901"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00606">
        <property type="entry name" value="B_KETOACYL_SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PKS_KS" evidence="3">
        <location>
            <begin position="4"/>
            <end position="407"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008467"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU003694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ74183.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="407" mass="43053" checksum="E9779259A5942DAA" modified="2015-12-09" version="1">MRRVVVTGIGIVSSIGSNAQEVLASLREGKSGISFAPDYAEHGFRSQVHGMPNIDIPELIDKRQLRFMGDGAAYNYISMQQAIADSGLEESDVSNERSGLIMGSGGPSTKNLFQAHKIVIEKGSPKRMGPFMVTRGMSSTNSACLATPFKIKGINYSITSACSTSAHCIGAATEQIQFGKQDVMFAGGGEELDWTLSCLFDAMGAMSSKYNDTPETASRAYDATRDGFVIAGGGGVVVLEELEHAKARGAKIYAEVTGYAANSDGYDMVAPSGEGGERCMRIATSTLGDRKVDYINSHGTSTPVGDVGEIEAIRRVFGENQPPVSSTKSLTGHSLGATGVQEAIYCLLMMQNDFITASANVNELDPALKPEEIVTTRVDNAGLDTVLSNSFGFGGTNASLAMSRYHG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AL87</accession>
    <name>A0A0M7AL87_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Chemotactic signal-response protein CheL</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04074</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ74990.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673350.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04074"/>
    <dbReference type="EnsemblBacteria" id="CTQ74990">
        <property type="protein sequence ID" value="CTQ74990"/>
        <property type="gene ID" value="LAX5112_04074"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019301">
        <property type="entry name" value="Flagellar_prot_FlgJ_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10135">
        <property type="entry name" value="Rod-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Rod-binding" evidence="1">
        <location>
            <begin position="93"/>
            <end position="133"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF10135"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74990.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="143" mass="14704" checksum="7B90B92D32360991" modified="2015-12-09" version="1">MAISPPSDLILDVAKAADPTEIREASNRLRSIAASGDGSGFSLAFDSARSGGPSGTSFDMFRSGSADAVASQKSPAEKFEAMILTQFVETMLPKDAEMVFGKGTTGEIWKSMLAEQVAGQLAASGGIGVADLISDTLKQGAKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALH4</accession>
    <name>A0A0M7ALH4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Antibiotic biosynthesis monooxygenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03928</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74633.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673241.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03928"/>
    <dbReference type="EnsemblBacteria" id="CTQ74633">
        <property type="protein sequence ID" value="CTQ74633"/>
        <property type="gene ID" value="LAX5112_03928"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004497">
        <property type="term" value="F:monooxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007138">
        <property type="entry name" value="ABM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03992">
        <property type="entry name" value="ABM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51725">
        <property type="entry name" value="ABM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0503">Monooxygenase</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABM" evidence="1">
        <location>
            <begin position="11"/>
            <end position="105"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51725"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74633.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="106" mass="12378" checksum="B5A28CE1FAB3151E" modified="2015-12-09" version="1">MPKISEASDYQTVITTFEMTPGTCLDLLEELKDAYREFIQHQPGFIGAGLHVNDAQTRIANYSQWRQREDFLAMLRSDEMRERNRRIHALCKSFEPVMYDVAESFA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALP8</accession>
    <name>A0A0M7ALP8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Acetyl-/propionyl-coenzyme A carboxylase alpha chain</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">accA1_2</name>
        <name evidence="10" type="ORF">LAX5112_03943</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>biotin</name>
            <dbReference type="ChEBI" id="CHEBI:57586"/>
        </cofactor>
    </comment>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74703.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673249.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03943"/>
    <dbReference type="EnsemblBacteria" id="CTQ74703">
        <property type="protein sequence ID" value="CTQ74703"/>
        <property type="gene ID" value="LAX5112_03943"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016874">
        <property type="term" value="F:ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011761">
        <property type="entry name" value="ATP-grasp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005481">
        <property type="entry name" value="BC-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001882">
        <property type="entry name" value="Biotin_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011764">
        <property type="entry name" value="Biotin_carboxylation_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005482">
        <property type="entry name" value="Biotin_COase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000089">
        <property type="entry name" value="Biotin_lipoyl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005479">
        <property type="entry name" value="CbamoylP_synth_lsu-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016185">
        <property type="entry name" value="PreATP-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011054">
        <property type="entry name" value="Rudment_hybrid_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011053">
        <property type="entry name" value="Single_hybrid_motif"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02785">
        <property type="entry name" value="Biotin_carb_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00289">
        <property type="entry name" value="Biotin_carb_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00364">
        <property type="entry name" value="Biotin_lipoyl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02786">
        <property type="entry name" value="CPSase_L_D2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00878">
        <property type="entry name" value="Biotin_carb_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51230">
        <property type="entry name" value="SSF51230"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51246">
        <property type="entry name" value="SSF51246"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52440">
        <property type="entry name" value="SSF52440"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50975">
        <property type="entry name" value="ATP_GRASP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50979">
        <property type="entry name" value="BC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00188">
        <property type="entry name" value="BIOTIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50968">
        <property type="entry name" value="BIOTINYL_LIPOYL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00867">
        <property type="entry name" value="CPSASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0092">Biotin</keyword>
    <keyword evidence="2" id="KW-0436">Ligase</keyword>
    <keyword evidence="3 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Biotin carboxylation" evidence="9">
        <location>
            <begin position="1"/>
            <end position="450"/>
        </location>
    </feature>
    <feature type="domain" description="ATP-grasp" evidence="8">
        <location>
            <begin position="120"/>
            <end position="322"/>
        </location>
    </feature>
    <feature type="domain" description="Lipoyl-binding" evidence="7">
        <location>
            <begin position="569"/>
            <end position="657"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001953"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023267"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00409"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50979"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ74703.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="664" mass="71137" checksum="EC534528CDED8A3F" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALU7</accession>
    <name>A0A0M7ALU7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">3-carboxy-cis,cis-muconate cycloisomerase</fullName>
            <ecNumber evidence="2">5.5.1.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">pcaB</name>
        <name evidence="2" type="ORF">LAX5112_03957</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="5.5.1.2" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74743.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673258.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03957"/>
    <dbReference type="EnsemblBacteria" id="CTQ74743">
        <property type="protein sequence ID" value="CTQ74743"/>
        <property type="gene ID" value="LAX5112_03957"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047472">
        <property type="term" value="F:3-carboxy-cis,cis-muconate cycloisomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020557">
        <property type="entry name" value="Fumarate_lyase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000362">
        <property type="entry name" value="Fumarate_lyase_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022761">
        <property type="entry name" value="Fumarate_lyase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008948">
        <property type="entry name" value="L-Aspartase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00206">
        <property type="entry name" value="Lyase_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00149">
        <property type="entry name" value="FUMRATELYASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48557">
        <property type="entry name" value="SSF48557"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00163">
        <property type="entry name" value="FUMARATE_LYASES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0413">Isomerase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lyase_1" evidence="1">
        <location>
            <begin position="36"/>
            <end position="291"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00206"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74743.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="435" mass="45992" checksum="F39F78826C2BBCBA" modified="2015-12-09" version="1">MPISLFSSPVFSDLYSDADLVLRLDEDADLLHMIRFEQALAQVQGALGIIPEGAAATIVSALETCEIEPIALSKGTRSAGIPVPALVASLRKVAGDDAGSWLHWGATSQDVMDTALVLQAKSCLHVLEERLGKLIDALETESVRHANQLLAGRTRSQISTPITFGYRIAQWAHGLIDAEADLPALREKVLRVQFGGASGVNSAVAPDGPRIAEALAEELKLHFSPSWHSNRSNILALSAWLQALTAGIAKMAGDLLLLGRSDIAEVSSGTGGGSSTMPQKANPVQAEAILTLNAIVQTSASGIAAAATPAEERDGARWPLEWAFLPQMLIATGAALRHAQALADSMSPNQDRISSGLKDHPEIMAEAASFALAKNGVPRAEAKDIVAKAASQTDFKSTLKQLAPDGIDWDTVLDLATVIPACKEMTAEIFARRSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AM18</accession>
    <name>A0A0M7AM18_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Fatty acid desaturase</fullName>
            <ecNumber evidence="3">1.14.19.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">des</name>
        <name evidence="3" type="ORF">LAX5112_03932</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.14.19.-" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74644.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673228.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03932"/>
    <dbReference type="EnsemblBacteria" id="CTQ74644">
        <property type="protein sequence ID" value="CTQ74644"/>
        <property type="gene ID" value="LAX5112_03932"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006629">
        <property type="term" value="P:lipid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005804">
        <property type="entry name" value="FA_desaturase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012171">
        <property type="entry name" value="Fatty_acid_desaturase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19353">
        <property type="entry name" value="PTHR19353"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00487">
        <property type="entry name" value="FA_desaturase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="24"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="51"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="147"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="178"/>
            <end position="198"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="204"/>
            <end position="227"/>
        </location>
    </feature>
    <feature type="domain" description="FA_desaturase" evidence="2">
        <location>
            <begin position="51"/>
            <end position="291"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00487"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ74644.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="329" mass="37480" checksum="406FF463482A34EA" modified="2015-12-09" version="1">MHPSQIQDLVDHCEQYRTPNNVTAVFQVLTTVPLFVALVAAMYVTVDISYWITLALSVPTAGLIVRLFIIQHDCGHGSFFSSKTANDTIGRLMSILTLTPYAYWQRAHALHHATSSNLDRRGFGDIDTLTLEEFRSLPFVKRVWYRIYRNPFFMTFVGGVLHFLIIQRLPFTVQRPSWKMTASVLLLDLAIVAVYGTLAFFMGWVHFALVFAPIVVLSAAAGVWLFYIQHQFEETHWSRDGVWDRKTAAILGSSYYELPAVLNWFTGNIGLHHIHHLCSHIPNYRLQECMAGKPELASINKLTIWESLESAHLALWDEDTKRLVPFSAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AM19</accession>
    <name>A0A0M7AM19_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Protein-tyrosine-phosphatase</fullName>
            <ecNumber evidence="2">3.1.3.48</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">arsC_4</name>
        <name evidence="5" type="ORF">LAX5112_04499</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>H2O + O-phospho-L-tyrosyl-[protein] = L-tyrosyl-[protein] + phosphate</text>
            <dbReference type="Rhea" id="RHEA:10684"/>
            <dbReference type="Rhea" id="RHEA-COMP:10136"/>
            <dbReference type="Rhea" id="RHEA-COMP:10137"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:46858"/>
            <dbReference type="ChEBI" id="CHEBI:82620"/>
            <dbReference type="EC" id="3.1.3.48"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="3.1.3.48" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000025">
        <property type="protein sequence ID" value="CTQ76175.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451664.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000025.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04499"/>
    <dbReference type="EnsemblBacteria" id="CTQ76175">
        <property type="protein sequence ID" value="CTQ76175"/>
        <property type="gene ID" value="LAX5112_04499"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004725">
        <property type="term" value="F:protein tyrosine phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023485">
        <property type="entry name" value="Ptyr_pPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036196">
        <property type="entry name" value="Ptyr_pPase_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01451">
        <property type="entry name" value="LMWPc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00226">
        <property type="entry name" value="LMWPc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52788">
        <property type="entry name" value="SSF52788"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-0904">Protein phosphatase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="LMWPc" evidence="4">
        <location>
            <begin position="9"/>
            <end position="144"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00013064"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022912"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00226"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ76175.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="150" mass="16660" checksum="09B847181F040F74" modified="2015-12-09" version="1">MAGPDLRPTAVLFACGMNSVRSPMAEALTQKLFPGQIYVKSAGVRAGKLDPFVDAVMAEIGVDMSAHRPKSYLELEESGFDLIVTLAPEAHHWALDLTRTDAVDVEYWPTMDPTLATGSREQILNEYRAVRDMLMMRIKKRLNWTPPPSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AM56</accession>
    <name>A0A0M7AM56_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04274</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75522.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75522">
        <property type="protein sequence ID" value="CTQ75522"/>
        <property type="gene ID" value="LAX5112_04274"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809591" evidence="1">
        <location>
            <begin position="24"/>
            <end position="445"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75522.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="445" mass="49982" checksum="68EAECDB36E6E0E7" modified="2015-12-09" version="1">MLALKIICKIVLFYTSITLSAYTASAEIRYTGANLVIADGGLLFELGPGPSKKEADEAWYARDQFTGEPIGIQSVIGSYHRFENRVRSQLELLRANGIDKMSLLIWHADLNLGDPRFSDGTWGHVVSSHASRLLPQHEQNLRNYLMLLKQMNFSEIVVRWGLQGKNRPRDWGEWDEEKYQHSWEFLQYSREIVEEELADSSVLIWYDLGSELGGFAPNSITGRYAARLWKDYRYTFGTEDTVGFSVATLPTGERVHNLLAMFRAANAFPMRIAVDVNGNVETRLRGTYRALSNQDLLGLDIVILETYAGSLSIIDEISRSSLNVVDVYAWPLTDNRSRHFDRLVPLVSSISGIEVTCPEADCLEIVANNIGDVFVIRTVDVDGLKDLREYDKSETFETKRSGRVTTTSIQLQSKLEQNLVNAGKLCIAIDSLTVGSSTECVTAMK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMY7</accession>
    <name>A0A0M7AMY7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04128</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75153.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04128"/>
    <dbReference type="EnsemblBacteria" id="CTQ75153">
        <property type="protein sequence ID" value="CTQ75153"/>
        <property type="gene ID" value="LAX5112_04128"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018772">
        <property type="entry name" value="Transcription_activator_HlyU"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10115">
        <property type="entry name" value="HlyU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75153.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="95" mass="10538" checksum="23FBD0EFBFD95CD5" modified="2015-12-09" version="1">MFGKVLKSMFGGSDAPQKPGNSVSVEYDSYTIIAEPQQNGGQWQVRGRIEKQDGEELKSHVFIRADTLPGETEAANEMIRKAKMMIDQQGDSIFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMY8</accession>
    <name>A0A0M7AMY8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04355</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75776.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673577.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000023.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04355"/>
    <dbReference type="EnsemblBacteria" id="CTQ75776">
        <property type="protein sequence ID" value="CTQ75776"/>
        <property type="gene ID" value="LAX5112_04355"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809605" evidence="1">
        <location>
            <begin position="21"/>
            <end position="188"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75776.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="188" mass="20389" checksum="8720D5C2AE3D3F22" modified="2015-12-09" version="1">MAKLSAVILLTFLPAIKAFAGAPNVSVASVLSAVSGYQDSNYYKAVLVKGEEDADLYLFSRDGWDLILEAYAPGIVVTGIGGTDASLSTAENGALRVHSENIAISRNRWQQTLTIVHRDGQYVVAGYTYSFYDTLAVDANGDVLTGECDVNLLTGKGVKDSQPFRTNFRSVPVTKWRADMAPPECEWE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMZ4</accession>
    <name>A0A0M7AMZ4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04066</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ74974.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04066"/>
    <dbReference type="EnsemblBacteria" id="CTQ74974">
        <property type="protein sequence ID" value="CTQ74974"/>
        <property type="gene ID" value="LAX5112_04066"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036748">
        <property type="entry name" value="MTH938-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007523">
        <property type="entry name" value="NDUFAF3/AAMDC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21192">
        <property type="entry name" value="PTHR21192"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04430">
        <property type="entry name" value="DUF498"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64076">
        <property type="entry name" value="SSF64076"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ74974.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="128" mass="13611" checksum="1ED616892ED490C1" modified="2015-12-09" version="1">MKGLEIRDAHFPGRAPLDAYGDGGFRFAEMSHRGSLLCVPSGIYGWNLTTPAEFSLEAFERVFEEQPDIEVLLVGTGPDLSPLSADLKGAFREAGILADPMSTGAAVRTYNVLLSEGRAVAAALLAVD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AN49</accession>
    <name>A0A0M7AN49_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Glutamate synthase [NADPH] large chain</fullName>
            <ecNumber evidence="5">1.4.1.13</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">gltA_3</name>
        <name evidence="5" type="ORF">LAX5112_04384</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the glutamate synthase family.</text>
    </comment>
    <dbReference type="EC" id="1.4.1.13" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75852.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04384"/>
    <dbReference type="EnsemblBacteria" id="CTQ75852">
        <property type="protein sequence ID" value="CTQ75852"/>
        <property type="gene ID" value="LAX5112_04384"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004355">
        <property type="term" value="F:glutamate synthase (NADPH) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006537">
        <property type="term" value="P:glutamate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd02808">
        <property type="entry name" value="GltS_FMN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024188">
        <property type="entry name" value="GltB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002932">
        <property type="entry name" value="Glu_synthdom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027283">
        <property type="entry name" value="YerD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01645">
        <property type="entry name" value="Glu_synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006429">
        <property type="entry name" value="GOGAT_lg_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF500060">
        <property type="entry name" value="UCP500060"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="7"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="30"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="domain" description="Glu_synthase" evidence="4">
        <location>
            <begin position="156"/>
            <end position="473"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009716"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRNR" id="PIRNR006429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF01645"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ75852.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="550" mass="59660" checksum="91067A7DD7E7B115" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANG0</accession>
    <name>A0A0M7ANG0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Cyclic di-GMP phosphodiesterase Gmr</fullName>
            <ecNumber evidence="8">3.1.4.52</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">gmr_13</name>
        <name evidence="8" type="ORF">LAX5112_04345</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.4.52" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75750.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673569.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000023.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75750">
        <property type="protein sequence ID" value="CTQ75750"/>
        <property type="gene ID" value="LAX5112_04345"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071111">
        <property type="term" value="F:cyclic-guanylate-specific phosphodiesterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd01948">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01949">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00130">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.450">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001633">
        <property type="entry name" value="EAL_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035919">
        <property type="entry name" value="EAL_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000160">
        <property type="entry name" value="GGDEF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001610">
        <property type="entry name" value="PAC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000014">
        <property type="entry name" value="PAS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000700">
        <property type="entry name" value="PAS-assoc_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035965">
        <property type="entry name" value="PAS-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013655">
        <property type="entry name" value="PAS_fold_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00563">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00990">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08447">
        <property type="entry name" value="PAS_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13426">
        <property type="entry name" value="PAS_9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00052">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00267">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00086">
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        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00091">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00062">
        <property type="entry name" value="PBPb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141868">
        <property type="entry name" value="SSF141868"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55785">
        <property type="entry name" value="SSF55785"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00254">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00229">
        <property type="entry name" value="sensory_box"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50883">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50887">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50113">
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50112">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 3" id="KW-0732">Signal</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809794" evidence="3">
        <location>
            <begin position="23"/>
            <end position="1022"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="268"/>
            <end position="289"/>
        </location>
    </feature>
    <feature type="domain" description="PAS" evidence="4">
        <location>
            <begin position="333"/>
            <end position="403"/>
        </location>
    </feature>
    <feature type="domain" description="PAS" evidence="4">
        <location>
            <begin position="448"/>
            <end position="497"/>
        </location>
    </feature>
    <feature type="domain" description="PAC" evidence="5">
        <location>
            <begin position="524"/>
            <end position="576"/>
        </location>
    </feature>
    <feature type="domain" description="GGDEF" evidence="7">
        <location>
            <begin position="608"/>
            <end position="742"/>
        </location>
    </feature>
    <feature type="domain" description="EAL" evidence="6">
        <location>
            <begin position="751"/>
            <end position="1006"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50112"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50113"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ75750.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="1022" mass="114869" checksum="42CE34DA21894DE6" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANK2</accession>
    <name>A0A0M7ANK2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">PspA/IM30 family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04605</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the PspA/IM30 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000027">
        <property type="protein sequence ID" value="CTQ76479.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04605"/>
    <dbReference type="EnsemblBacteria" id="CTQ76479">
        <property type="protein sequence ID" value="CTQ76479"/>
        <property type="gene ID" value="LAX5112_04605"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007157">
        <property type="entry name" value="PspA_IM30"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31088">
        <property type="entry name" value="PTHR31088"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04012">
        <property type="entry name" value="PspA_IM30"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76479.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="231" mass="24637" checksum="D924FD6D564240F0" modified="2015-12-09" version="1">MLYRLIDTLRGLIAGTAEDVSYRNDLALLKQQLRDAGATLQAARKAVALATAQHEQDVRRISKITETIGDLEARAIAALAKGEEKLAIEAANAIAILEDERGSLGTSTLAFEGDLRKLNENVRRSEAQLRDLERGQRVATVREKVQAVSSLSVAAPGASLADASETLERIRDRQERGLLADTALAAMSAVEAPSQLVSRLADAGCGAPVRSSGETVLERLKASSPKLLNNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APB4</accession>
    <name>A0A0M7APB4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">N-formylglutamate deformylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04761</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000030">
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        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04761"/>
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        <property type="gene ID" value="LAX5112_04761"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007709">
        <property type="entry name" value="N-FG_amidohydro"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05013">
        <property type="entry name" value="FGase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="264"/>
            <end position="313"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="264"/>
            <end position="287"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76968.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="313" mass="34263" checksum="B6A54F2641BD0E07" modified="2015-12-09" version="1">MIMVEEGASPLVLCLPHTGTDVPAVIGKRLNATGRLQTDLSWRLEDVLRLSSDLDATIIRSTISRYVIDLDRDSETPLSAAEDPKTALCPVTTLDGKRIYLDGEEPGATEAEQRVLLFARPFEKAVQQQVSRVSRMHRKVIVVDCQSMRSHIKGVTDKGLPVISVGSAEGTACDPDLLNLVVGSFKSQQGYTVGVDELVKGGHLTRTYGRPERGLHALSLLIAQRAYLRHESPPFEPDKSRVQRLGNLLEDTFSRAIDWARMENSRSYSSQPSAAQEQETAVSPLTEDEAANDTHGPAGERPGQPPTMLQVAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APY6</accession>
    <name>A0A0M7APY6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">HTH-type transcriptional repressor KstR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">kstR</name>
        <name evidence="6" type="ORF">LAX5112_04604</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000027">
        <property type="protein sequence ID" value="CTQ76476.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04604"/>
    <dbReference type="EnsemblBacteria" id="CTQ76476">
        <property type="protein sequence ID" value="CTQ76476"/>
        <property type="gene ID" value="LAX5112_04604"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036271">
        <property type="entry name" value="Tet_transcr_reg_TetR-rel_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025996">
        <property type="entry name" value="TetR_C_WHG"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13305">
        <property type="entry name" value="TetR_C_33"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00440">
        <property type="entry name" value="TetR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00455">
        <property type="entry name" value="HTHTETR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48498">
        <property type="entry name" value="SSF48498"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50977">
        <property type="entry name" value="HTH_TETR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH tetR-type" evidence="5">
        <location>
            <begin position="39"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="4">
        <location>
            <begin position="62"/>
            <end position="81"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ76476.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="226" mass="24700" checksum="9121980365B5471F" modified="2015-12-09" version="1">MVNTEMNKVHFCAEDDIGMQMKTEGTNDRRQQALSAKSAETRQRILAAADDLMSETGIEAVQIRSVASRAGCSIGSVYKHFKDNDALIVAVNVLTLESLKAAMANVAKGVEEPIERLKALSHAYRHFAEDNTKAWQGLFSHHLPDGQGIPEEHLGLNVALLELIAGTLREINPHLSHEVLAARTRTCFAAIHGLVTISLEGRFVAVDDQSLASEMDFMVDRLSVAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQM0</accession>
    <name>A0A0M7AQM0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04630</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000027">
        <property type="protein sequence ID" value="CTQ76550.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76550">
        <property type="protein sequence ID" value="CTQ76550"/>
        <property type="gene ID" value="LAX5112_04630"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809856" evidence="1">
        <location>
            <begin position="30"/>
            <end position="352"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76550.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="352" mass="38383" checksum="3EC2A5DA2B53066A" modified="2015-12-09" version="1">MRPIRTCLHFLPAALALVFHLLAVSAATAQMSPRNGLADNWRQILEGVDGYPAGPMLEIALRRTHSDKLEMFRWRSEFISMLSAQPGPLVEREWESLSGIPENTGAGTWTGMTWWDNQQSWQDMANMLFPSPVTANWLQTIHMTLIFVKPLDGDFDLRTLAQSGEELLELGILVFPNGPVDDLDAARGAVKSYLDAVETAGANAYHFDVYPNPMGVNGPYTAAYMQNGMPSIDEGEWSVYMVAYPSRAERDAIHRADPVKNAFAAMRSATTTEKSDIQVMTRSTSKVCCQADNMCSLDPGVCNVGILGMGDTWAGNCGQCPRPCETASGLCSHLSPDTCLAVGGKQVPACAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARF8</accession>
    <name>A0A0M7ARF8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_05023</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000042">
        <property type="protein sequence ID" value="CTQ77708.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674145.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000042.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_05023"/>
    <dbReference type="EnsemblBacteria" id="CTQ77708">
        <property type="protein sequence ID" value="CTQ77708"/>
        <property type="gene ID" value="LAX5112_05023"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032675">
        <property type="entry name" value="LRR_dom_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ77708.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="334" mass="38597" checksum="13CC57FDD3AC2B78" modified="2015-12-09" version="1">MIIERISDPDYLCYEDVKQILDNGRSVTVQFSKPAHSPDLFDSLNGLCKTFGTLVTARFFGHYQEGFDASVLSLLPDVKSLSVDSLTRIFNEDELARLPSLERLVFGVFEFDRPSFLKDLEIERFTHFAVSENRKRNFDLSPLQGCRELRKLFIQGHIRNIDTLNKLPKLEALGLSGMPKRKDLAFVCDVPKLKSFELVLGARQSINEFSHNGLEELRVRRVRSLESLGPLDRFPSLRLLHVEDQLQLHSVSLSGPSLLDIEFLNCKKLNQLSGLDEQREIKRFRVGRTELDLNEFLEFDWPPTLEVIALYSRNDNWNKAARQKLDQLGYREHF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARJ8</accession>
    <name>A0A0M7ARJ8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Chitooligosaccharide synthase NodC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04857</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000033">
        <property type="protein sequence ID" value="CTQ77277.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674005.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000033.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04857"/>
    <dbReference type="EnsemblBacteria" id="CTQ77277">
        <property type="protein sequence ID" value="CTQ77277"/>
        <property type="gene ID" value="LAX5112_04857"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="27"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="58"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="389"/>
            <end position="407"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="413"/>
            <end position="432"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="491"/>
            <end position="514"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77277.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="530" mass="61364" checksum="A24C5C6B089D0B6E" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARU0</accession>
    <name>A0A0M7ARU0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Hydrogen cyanide synthase subunit HcnC</fullName>
            <ecNumber evidence="2">1.4.99.5</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">hcnC_2</name>
        <name evidence="2" type="ORF">LAX5112_04762</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.4.99.5" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000030">
        <property type="protein sequence ID" value="CTQ76970.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673927.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000030.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04762"/>
    <dbReference type="EnsemblBacteria" id="CTQ76970">
        <property type="protein sequence ID" value="CTQ76970"/>
        <property type="gene ID" value="LAX5112_04762"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050622">
        <property type="term" value="F:glycine dehydrogenase (cyanide-forming) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006076">
        <property type="entry name" value="FAD-dep_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01266">
        <property type="entry name" value="DAO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DAO" evidence="1">
        <location>
            <begin position="7"/>
            <end position="362"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01266"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76970.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="393" mass="42066" checksum="C9DB8A127B758ABB" modified="2015-12-09" version="1">MAHQTADVVILGGAVMGSSVACHLAQRDDFSGRIIVVEADPSYEICASARSAASIRQQFSSAINIEISLYGIQYLREIGAQLAVDSDRPVIDLHEGGYLFLATPDKQHILQENHQLQQQLGADIGYYDVDGLVAKFPWLNTSDLTAGCHGLTGEGWFDGYGLMQAFRKKARSLGVDYLSGKAAIDQETGGNWSVRLPDGATVSTPCVVNCAGASGGTDLCRQAGIEVPIVPKKRCVFTFECRDDLANFPLLIDPTGTYVRPEGTGYICGSAPPADQDPDAPDFDVDYGLFEEHIWPVLANRVPAFEAIKPGAAWAGTYDMNLFDHNAFLGGVAGVDGFYMALGFSGHGLQQSPAVGRGLSELIAAGSYQTLDLTPLAFDRLAADRPIVEKNVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AS03</accession>
    <name>A0A0M7AS03_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04910</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000034">
        <property type="protein sequence ID" value="CTQ77437.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04910"/>
    <dbReference type="EnsemblBacteria" id="CTQ77437">
        <property type="protein sequence ID" value="CTQ77437"/>
        <property type="gene ID" value="LAX5112_04910"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ77437.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="98" mass="11095" checksum="C5D643BC8FCDAB16" modified="2015-12-09" version="1">MDYQEHTDKDVRLTILKALASENDKRLNETIITHILKNFGHTRSREYVRTQIRKLADLGAVGVTEVGSVLVAQLKQPGLDHVERRTFLEGVLQPSLDS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASF4</accession>
    <name>A0A0M7ASF4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">AsmA_2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04882</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000033">
        <property type="protein sequence ID" value="CTQ77346.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04882"/>
    <dbReference type="EnsemblBacteria" id="CTQ77346">
        <property type="protein sequence ID" value="CTQ77346"/>
        <property type="gene ID" value="LAX5112_04882"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032712">
        <property type="entry name" value="AsmA_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13502">
        <property type="entry name" value="AsmA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AsmA_2" evidence="1">
        <location>
            <begin position="1"/>
            <end position="113"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13502"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77346.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="166" mass="16670" checksum="6EB1420786EF91D1" modified="2015-12-09" version="1">MSGKTAVSVWGGTVGSRIIDLSGMSLIRWMFGSGNGDGTAKLVCAKVPMSFKNGVGSSRSMVIETDNVQIVGGGSVDLKNGTIALEFVPRAKRPDLVEIVTTFAVRGPLADPEIVVLSGGGAGRAVAEIVSTPLNILGAVFGAGGAGNDSAGSEKPCVIPKASGPK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASW2</accession>
    <name>A0A0M7ASW2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_04661</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000028">
        <property type="protein sequence ID" value="CTQ76654.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76654">
        <property type="protein sequence ID" value="CTQ76654"/>
        <property type="gene ID" value="LAX5112_04661"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="83"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="57"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ76654.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="102" mass="11086" checksum="58D0D9884DD0198E" modified="2015-12-09" version="1">MAASRELKAELSQLVSEAEPKTARAPRSRKRKAVEKPVAQEAAPAGETASEETSEFPHDLKELADKLSEFADDAEQEIRDRPVTMVLGAFALGIIVGAVLRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AT54</accession>
    <name>A0A0M7AT54_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Chromosome segregation protein SMC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_04990</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000038">
        <property type="protein sequence ID" value="CTQ77642.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674121.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000038.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04990"/>
    <dbReference type="EnsemblBacteria" id="CTQ77642">
        <property type="protein sequence ID" value="CTQ77642"/>
        <property type="gene ID" value="LAX5112_04990"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="438"/>
            <end position="490"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="110"/>
            <end position="424"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ77642.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="490" mass="55474" checksum="20281B7A865574B1" modified="2015-12-09" version="1">MGIFSKSSRPGEGLDQKIETVTEQIPEQDTSSNVEQLSPFALRMQEKMNQLDGLKGRVGGLTQTFDQMAAFAAESQTSIRMMAEYIESSRASVETEVRLKSENAKISTDLLDAEHKVKTLTTQLEDAQAEVHSLRKRSTETRTALETARNDIVTIRDNNKKINEEYRQQSAKLVDANAQIADLSGKLNDLKAKFETLEKHSESLSSDLEAVKHREKELQQNLSESAKLLEEEIRKNNQASSELEAAKRELIDFRNDNIDLKSHLDVANQELVYAKSRLEEEQRKHDNEVYALNAEIENLSSQRRIGAQSLQEMARENSTIKERNRELVKRMQEIEHLLDSAQKNHEKDRNELMATTAKLREVNLRYNSTLTDLNHQRNQNQKFADNLEDLVDENKRLQRYKIQVDTANEQIAQLKTVIANYQMAMEGRGPAEELGLTESFDPAADLGITDPLPVTDEDDDLLESAAKPDDGNPDDDGPSGGNDKVVKLRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZLS3</accession>
    <name>A0A0M6ZLS3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 4">Guanine deaminase</fullName>
            <shortName evidence="4">Guanase</shortName>
            <ecNumber evidence="3 4">3.5.4.3</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">Guanine aminohydrolase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6" type="primary">guaD_1</name>
        <name evidence="6" type="ORF">LAX5112_00039</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>guanine + H(+) + H2O = NH4(+) + xanthine</text>
            <dbReference type="Rhea" id="RHEA:14665"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16235"/>
            <dbReference type="ChEBI" id="CHEBI:17712"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="EC" id="3.5.4.3"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="4">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="4">Binds 1 zinc ion per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="1 4">Purine metabolism; guanine degradation; xanthine from guanine: step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 4">Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.</text>
    </comment>
    <dbReference type="EC" id="3.5.4.3" evidence="3 4"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63708.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670100.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00039"/>
    <dbReference type="EnsemblBacteria" id="CTQ63708">
        <property type="protein sequence ID" value="CTQ63708"/>
        <property type="gene ID" value="LAX5112_00039"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00603">
        <property type="reaction ID" value="UER00660"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008892">
        <property type="term" value="F:guanine deaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006147">
        <property type="term" value="P:guanine catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01303">
        <property type="entry name" value="GDEase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006680">
        <property type="entry name" value="Amidohydro-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014311">
        <property type="entry name" value="Guanine_deaminase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011059">
        <property type="entry name" value="Metal-dep_hydrolase_composite"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032466">
        <property type="entry name" value="Metal_Hydrolase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11271:SF6">
        <property type="entry name" value="PTHR11271:SF6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01979">
        <property type="entry name" value="Amidohydro_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51338">
        <property type="entry name" value="SSF51338"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51556">
        <property type="entry name" value="SSF51556"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02967">
        <property type="entry name" value="guan_deamin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Amidohydro-rel" evidence="5">
        <location>
            <begin position="71"/>
            <end position="429"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006745"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012781"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU366009"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF01979"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ63708.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="442" mass="48582" checksum="3FDAF00B9615E57E" modified="2015-12-09" version="1">MAETTAKLLRGRLLTFTSAPNGPEDTSAYTFENDGTLLISNGVIKARGTYADVKATASEPFEEIDHRPHLLMPGFIDTHLHFPQVQVIASWADQLLDWLNDYTFPAEQKFADKAHGDRIAQGFYDCLLSNGTTTAVAYCSSHPNSVETYFEEAARRGMLILGGKTMMDRNAPEALCDTAESAYTDSKALLEKWHGKGRAHYVITPRFAITSTPQQLEAAGALLKEYPDCHLQTHINENHNEIAFTKELYPDAQDYLGVYEEFGLLGPKTLLGHCIHMNDRELGVMRETGSVAVFCPTSNLFLGSGLFDKKRTEAAGIKTSIATDIGGGTSYSMLRTLDEGYKVLQLQRQRLHPLETFYWATLGNAKALSLSEKIGSLDVGTDADIVVLNAKATRPMALRMQTAETLSEELFVLQTLGDDRSVVETYVAGTPQKPADLGTANL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZN84</accession>
    <name>A0A0M6ZN84_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Calcium/proton antiporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">chaA</name>
        <name evidence="7" type="ORF">LAX5112_00072</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63807.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008195626.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00072"/>
    <dbReference type="EnsemblBacteria" id="CTQ63807">
        <property type="protein sequence ID" value="CTQ63807"/>
        <property type="gene ID" value="LAX5112_00072"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1420.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004837">
        <property type="entry name" value="NaCa_Exmemb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044880">
        <property type="entry name" value="NCX_ion-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01699">
        <property type="entry name" value="Na_Ca_ex"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="7"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="30"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="73"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="104"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="138"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="170"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="213"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="241"/>
            <end position="267"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="288"/>
            <end position="311"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="317"/>
            <end position="338"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="345"/>
            <end position="363"/>
        </location>
    </feature>
    <feature type="domain" description="Na_Ca_ex" evidence="6">
        <location>
            <begin position="37"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="domain" description="Na_Ca_ex" evidence="6">
        <location>
            <begin position="222"/>
            <end position="361"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF01699"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ63807.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="366" mass="38882" checksum="03BCF3952E5FD910" modified="2015-12-09" version="1">MSILRSELPSIVGFLAFVVFKLLGDSLKPAAVGTVGSLILLVLIFIVVMWCAFSVVRHAECLATLFGEPYGTLILTLAVIGIEVALIVAIMLSGDAVPTMARDTMFSVVMIVLNGLVGLCLLLGGLKHRNQTYNLQGANAFLSVLVPLAIFALVLPRITHSAPGGELSPLQVGFEIVMSVILYGVFLAIQTVTHSDIFRQPDHADDDDHHHDVVVRTVPFHVIGLLGALLPIILLSKSLALYVEFGIAAVGAPIALSGFIVAALVLMPEGMSAVQAARENKLQRAVNICLGSAVATIGLTVPAVLIVGWVTGLRVELGLETTEIVLLVLTLFVSLLTFGSRTTNYLQGAVHLALFAAYIMLIFDLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZNX7</accession>
    <name>A0A0M6ZNX7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">HTH-type transcriptional regulator GltC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">gltC_1</name>
        <name evidence="3" type="ORF">LAX5112_00307</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64465.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670282.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00307"/>
    <dbReference type="EnsemblBacteria" id="CTQ64465">
        <property type="protein sequence ID" value="CTQ64465"/>
        <property type="gene ID" value="LAX5112_00307"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="13"/>
            <end position="70"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ64465.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="316" mass="34587" checksum="857CC89673B05E26" modified="2015-12-09" version="1">MRSARAQELARNLYSPAMRYFLAAAEAGSIRAASRELNIASSAVNRQILWLEEALGLQLFERVGRRMRLSQAGEVLLAHIRRTYSDFEGTVAELDALKGLRRGTVSIASVESVAERLLPAVISSFRRTYPGIHVNVSVYSSQEAARKVEAAEADVGFTFDPPDMSTLTAAFHHDLVIGAVMAPNHPLAEENGLSLADCLRYPVALPAEGLSIRARIDVIRSRIPGASMTYVEANSLRLMRALARDENVIGFQTQIGCEEDIEAGHLIFKPLKDEPLQADRLCVVTSSLRALALAPAMFFDHAVFALKERLASIDAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZNY0</accession>
    <name>A0A0M6ZNY0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00312</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64479.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670287.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ64479">
        <property type="protein sequence ID" value="CTQ64479"/>
        <property type="gene ID" value="LAX5112_00312"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ64479.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="134" mass="14874" checksum="E11949AA2912EFA8" modified="2015-12-09" version="1">MPEADALSLIEREPPQIRDGLLELRRLILETAVETDGAGKIVETLKWGQPSYLTEKPKSGTTIRIAKDDSELGDIALYVSCSTSLVSEWRGLFPDLAFGGDRSLHLSLAKPLPLPELRQMIGMALTYHSRKKSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZP02</accession>
    <name>A0A0M6ZP02_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 8">Corrinoid adenosyltransferase</fullName>
            <ecNumber evidence="5 8">2.5.1.17</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">Cob(II)alamin adenosyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="8">Cob(II)yrinic acid a,c-diamide adenosyltransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="primary">cobO</name>
        <name evidence="11" type="ORF">LAX5112_00129</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7 8">Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2 8">
            <text>2 ATP + 2 cob(II)alamin + reduced [electron-transfer flavoprotein] = 2 adenosylcob(III)alamin + 3 H(+) + oxidized [electron-transfer flavoprotein] + 2 triphosphate</text>
            <dbReference type="Rhea" id="RHEA:28671"/>
            <dbReference type="Rhea" id="RHEA-COMP:10685"/>
            <dbReference type="Rhea" id="RHEA-COMP:10686"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16304"/>
            <dbReference type="ChEBI" id="CHEBI:18036"/>
            <dbReference type="ChEBI" id="CHEBI:18408"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
            <dbReference type="ChEBI" id="CHEBI:58307"/>
            <dbReference type="EC" id="2.5.1.17"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 8">
            <text>2 ATP + 2 cob(II)yrinate a,c diamide + reduced [electron-transfer flavoprotein] = 2 adenosylcob(III)yrinate a,c-diamide + 3 H(+) + oxidized [electron-transfer flavoprotein] + 2 triphosphate</text>
            <dbReference type="Rhea" id="RHEA:11528"/>
            <dbReference type="Rhea" id="RHEA-COMP:10685"/>
            <dbReference type="Rhea" id="RHEA-COMP:10686"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:18036"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
            <dbReference type="ChEBI" id="CHEBI:58307"/>
            <dbReference type="ChEBI" id="CHEBI:58503"/>
            <dbReference type="ChEBI" id="CHEBI:58537"/>
            <dbReference type="EC" id="2.5.1.17"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3 8">Cofactor biosynthesis; adenosylcobalamin biosynthesis; adenosylcobalamin from cob(II)yrinate a,c-diamide: step 2/7.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 8">Belongs to the Cob(I)alamin adenosyltransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.17" evidence="5 8"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63961.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670155.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00129"/>
    <dbReference type="EnsemblBacteria" id="CTQ63961">
        <property type="protein sequence ID" value="CTQ63961"/>
        <property type="gene ID" value="LAX5112_00129"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00148">
        <property type="reaction ID" value="UER00233"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008817">
        <property type="term" value="F:cob(I)yrinic acid a,c-diamide adenosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009236">
        <property type="term" value="P:cobalamin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006779">
        <property type="term" value="P:porphyrin-containing compound biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00561">
        <property type="entry name" value="CobA_CobO_BtuR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003724">
        <property type="entry name" value="CblAdoTrfase_CobA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025826">
        <property type="entry name" value="Co_AT_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12557">
        <property type="entry name" value="Co_AT_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02572">
        <property type="entry name" value="CobA_CobO_BtuR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF015617">
        <property type="entry name" value="Adensltrnsf_CobA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00708">
        <property type="entry name" value="cobA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8" id="KW-0169">Cobalamin biosynthesis</keyword>
    <keyword evidence="8" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6 8" id="KW-0627">Porphyrin biosynthesis</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 11" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Co_AT_N" evidence="10">
        <location>
            <begin position="11"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="9">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000143"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001328"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005121"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00007487"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012454"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00024929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRNR" id="PIRNR015617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF12557"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ63961.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="212" mass="24067" checksum="1FFF80B474410138" modified="2015-12-09" version="1">MTADTDKPELSEDELNARHAEKMRKKKAARDKIMATKTIEKGLVIVHTGKGKGKSTAGFGMVFRSLGHGHKVGVVQFVKGRIETGERMALERFHDLVTIKRMGEGFTWETQDRQRDIDAAQQAWDAAKDMIRSGDFRLILCDELNIVLRYDYLDINEVVDFLKNEKPEDVHVIITGRNAKDELLEVADLVTDMTQVKHPFRSGVKPQEGIEF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPZ3</accession>
    <name>A0A0M6ZPZ3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00293</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64427.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670270.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ64427">
        <property type="protein sequence ID" value="CTQ64427"/>
        <property type="gene ID" value="LAX5112_00293"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="62"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="111"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="140"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="168"/>
            <end position="194"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64427.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="202" mass="21069" checksum="DEFE272A46EFD67C" modified="2015-12-09" version="1">MRAAGIGFWILIVETGAAQAHSPVPGIEGFYIGLLHPFSSPTQILLILGAGLLIGGFPRDKVRWLLAAFLAFSFAGLFWSGSAVSDTLAYTVAIATSALAAASANRFFPAAVVCVAITGLLLGAMSVPDGGLWWDRFVTMSGSLAGLNILMLYLSGLVVVLNERVQWAMLLVAIRIAAAWIAAVSSMMLAIQFAPASSVAAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQ51</accession>
    <name>A0A0M6ZQ51_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Aminotransferase</fullName>
            <ecNumber evidence="1">2.6.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">asD</name>
        <name evidence="3" type="ORF">LAX5112_00426</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.6.1.-" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64858.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670392.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00426"/>
    <dbReference type="EnsemblBacteria" id="CTQ64858">
        <property type="protein sequence ID" value="CTQ64858"/>
        <property type="gene ID" value="LAX5112_00426"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008483">
        <property type="term" value="F:transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901605">
        <property type="term" value="P:alpha-amino acid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009058">
        <property type="term" value="P:biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004839">
        <property type="entry name" value="Aminotransferase_I/II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022518">
        <property type="entry name" value="Aspartate_4-decarboxylase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004838">
        <property type="entry name" value="NHTrfase_class1_PyrdxlP-BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00155">
        <property type="entry name" value="Aminotran_1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03801">
        <property type="entry name" value="asp_4_decarbox"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00105">
        <property type="entry name" value="AA_TRANSFER_CLASS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 3" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Aminotran_1_2" evidence="2">
        <location>
            <begin position="169"/>
            <end position="509"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU000481"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ64858.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="531" mass="59573" checksum="160C1C587E253EED" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQ82</accession>
    <name>A0A0M6ZQ82_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Bicarbonate transport ATP-binding protein CmpD</fullName>
            <ecNumber evidence="6">3.6.3.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">cmpD_1</name>
        <name evidence="6" type="ORF">LAX5112_00436</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.-" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64888.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670397.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00436"/>
    <dbReference type="EnsemblBacteria" id="CTQ64888">
        <property type="protein sequence ID" value="CTQ64888"/>
        <property type="gene ID" value="LAX5112_00436"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015112">
        <property type="term" value="F:nitrate transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005890">
        <property type="entry name" value="NO3_transporter_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01184">
        <property type="entry name" value="ntrCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="4"/>
            <end position="237"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="302"/>
            <end position="535"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="40"/>
            <end position="47"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="338"/>
            <end position="345"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ64888.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="586" mass="64496" checksum="D2311F81445020FF" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQA8</accession>
    <name>A0A0M6ZQA8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Purine-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_00299</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64442.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670276.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00299"/>
    <dbReference type="EnsemblBacteria" id="CTQ64442">
        <property type="protein sequence ID" value="CTQ64442"/>
        <property type="gene ID" value="LAX5112_00299"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003760">
        <property type="entry name" value="PnrA-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02608">
        <property type="entry name" value="Bmp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809200" evidence="2">
        <location>
            <begin position="24"/>
            <end position="354"/>
        </location>
    </feature>
    <feature type="domain" description="Bmp" evidence="3">
        <location>
            <begin position="27"/>
            <end position="299"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF02608"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ64442.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="354" mass="38371" checksum="2AE46663FE42D2A4" modified="2015-12-09" version="1">MKSLLKATVAAAAFLVAGTAANAADVKACFVYVGPVGDFGWTYQHDQGRLAVEEHFGDKVETAFLESVAEGPDAERAIERFAREGCNIIFTTSFGYMNPTIKVAKKFPDVKFEHATGYKTADNVATYNSKFHQGRYIIGQVAAKQSKTGVAGYIASFPIPEVISGINAFMLGAQSVNPDFQLKVVWVNTWFDPGKEADAAKALIDQGADIVTQHTDSTAPLQVAQERGVYGFGQASDMVAFAPDAQYTAIIDDWAPYYIHRVQDVLDGKWESHSSWEGLAEKHVVMAPYTNLPADVVEMAKATEAKIVGGWEPFTGPITKQDGTVAAEDGVRLDDGAILGMNWYVQGVDDQLPQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZR79</accession>
    <name>A0A0M6ZR79_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Spermidine synthase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00389</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64752.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670366.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00389"/>
    <dbReference type="EnsemblBacteria" id="CTQ64752">
        <property type="protein sequence ID" value="CTQ64752"/>
        <property type="gene ID" value="LAX5112_00389"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="56"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="88"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="122"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="162"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="194"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="247"/>
            <end position="269"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="275"/>
            <end position="291"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="303"/>
            <end position="321"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="327"/>
            <end position="350"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="362"/>
            <end position="381"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="387"/>
            <end position="404"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="413"/>
            <end position="431"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="443"/>
            <end position="459"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="466"/>
            <end position="485"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64752.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="768" mass="84191" checksum="C57C7766AD7584B0" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRW8</accession>
    <name>A0A0M6ZRW8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">General stress protein 69</fullName>
            <ecNumber evidence="2">1.1.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yhdN_1</name>
        <name evidence="2" type="ORF">LAX5112_00456</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.1.1.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64946.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670414.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00456"/>
    <dbReference type="EnsemblBacteria" id="CTQ64946">
        <property type="protein sequence ID" value="CTQ64946"/>
        <property type="gene ID" value="LAX5112_00456"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023210">
        <property type="entry name" value="NADP_OxRdtase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036812">
        <property type="entry name" value="NADP_OxRdtase_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00248">
        <property type="entry name" value="Aldo_ket_red"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51430">
        <property type="entry name" value="SSF51430"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aldo_ket_red" evidence="1">
        <location>
            <begin position="17"/>
            <end position="316"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00248"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64946.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="360" mass="39847" checksum="6CE107F34611B10A" modified="2015-12-09" version="1">MTAETADLRPGYAISRVIKGGWQLAGDHGPVDSSAAIADMEAFLDAGITSFDCADIYTGVEEMIGSFISDVRERRGAEVADRVQVHTKLVPDLARLSELTADEVEAIVDRSLQRLQIDRLHLVQFYWWDTSIGAPVTAMETLKRCQEKGKIAHLGVTNWDVKETAPYLDAGIDLVSTQVQYSVLDRRAAKILAPWGAAHDVQLVCYGTLAGGFLTENWLGKPDPGFQFENRSLIKYRLIIDEFGTWDRFQTLLLLLNEIGLRHSVSLSSVATRWVLQQSQVAAAIVGARYARHLPKTLEVFQFELDAEDLSRIAALLQTAPGPQGDVFGLERDRNGRHGRIMKYNLNTRPDDAVLGAVNG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSS0</accession>
    <name>A0A0M6ZSS0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_00602</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65367.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008189410.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ65367">
        <property type="protein sequence ID" value="CTQ65367"/>
        <property type="gene ID" value="LAX5112_00602"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
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    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
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    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005808937" evidence="2">
        <location>
            <begin position="24"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="99"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="129"/>
            <end position="150"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ65367.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="221" mass="24345" checksum="4FA2D70CED71587B" modified="2015-12-09" version="1">MSVLTRLCVATVLIVASLLPAAAQTASQTSDRDARVAAPTSFLEACAEKIEERGRLRFCDTYFRDKLGTEADALLYLRDRITRLRASHETSSADKYESFLQAIYIVAFLTIASIVLIASERRIGGTAKWASLTSTAALLVMVIIVAMGWLGKYRAEYAAQVELGILRDRIETEAAQSIATGQQITPAMVTDWTRDLSAIGRRFAENYGEATVIPEVDRFNQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSU1</accession>
    <name>A0A0M6ZSU1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00574</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65286.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670503.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ65286">
        <property type="protein sequence ID" value="CTQ65286"/>
        <property type="gene ID" value="LAX5112_00574"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ65286.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="260" mass="28580" checksum="07B84140416F51F2" modified="2015-12-09" version="1">MLDRRDILENLADPENYPADMLAYCLKNPGRSAAIFLPILGKAANGTELDALEQLSFYLGLHLLAVLQTPNTFDGVYRLATQQPLLLADLLGEVGLGETFPRVLMRLGSGKATDLWEGFQTNTLDFMIRDAFLKAWTYEALKGQVNAVSAERSLRGFLKSEDAPSPDDPIWSGWLIAIADLGFSELMPLARDAVSSGRILAEDENLTALEFKGFETALTEAQSDTDLPEFLKARGYIPFGESDGDWGNCFVNSPQSHKLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZT33</accession>
    <name>A0A0M6ZT33_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">YciI-like protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_00810</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the YciI family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65939.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670722.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00810"/>
    <dbReference type="EnsemblBacteria" id="CTQ65939">
        <property type="protein sequence ID" value="CTQ65939"/>
        <property type="gene ID" value="LAX5112_00810"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005545">
        <property type="entry name" value="YCII"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03795">
        <property type="entry name" value="YCII"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="YCII" evidence="2">
        <location>
            <begin position="38"/>
            <end position="107"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007689"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF03795"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ65939.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="128" mass="13948" checksum="EDD90318CCAB4F76" modified="2015-12-09" version="1">MPKWQEYKQIAKERGALALELYVVNTKPVGPDADIPGALPDHLAYQAQLETSGSLAFAGPVSDETGEEMQGEGMIIYRATSLEEARALADGDPMHARGVRSYTLRRWMINEGSFTLSVGLSAKKTSFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTD3</accession>
    <name>A0A0M6ZTD3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">2-aminomuconate deaminase</fullName>
            <ecNumber evidence="1">3.5.99.5</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">amnD</name>
        <name evidence="1" type="ORF">LAX5112_00646</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.5.99.5" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65481.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670598.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00646"/>
    <dbReference type="EnsemblBacteria" id="CTQ65481">
        <property type="protein sequence ID" value="CTQ65481"/>
        <property type="gene ID" value="LAX5112_00646"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050540">
        <property type="term" value="F:2-aminomuconate deaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035959">
        <property type="entry name" value="RutC-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006175">
        <property type="entry name" value="YjgF/YER057c/UK114"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11803">
        <property type="entry name" value="PTHR11803"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01042">
        <property type="entry name" value="Ribonuc_L-PSP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55298">
        <property type="entry name" value="SSF55298"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ65481.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="134" mass="14192" checksum="C6F47B77099168BD" modified="2015-12-09" version="1">MSQATIERFGGGKTGAGGQPLPFATAVRAGDFVFISGQVAMKGNGEIEPGGVESQTKRTMENVIAALALAGCTLDDVVKVGVWLDDTRDFWTFNKVYASYFPNGGPARSTVRSQLMVDAKVEVDAVAYKPLTEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTH7</accession>
    <name>A0A0M6ZTH7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Hemin receptor</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">hemR</name>
        <name evidence="9" type="ORF">LAX5112_00694</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 6">Cell outer membrane</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the TonB-dependent receptor family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65607.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00694"/>
    <dbReference type="EnsemblBacteria" id="CTQ65607">
        <property type="protein sequence ID" value="CTQ65607"/>
        <property type="gene ID" value="LAX5112_00694"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009279">
        <property type="term" value="C:cell outer membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015232">
        <property type="term" value="F:heme transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.170.130.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.170.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039426">
        <property type="entry name" value="BtuB-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012910">
        <property type="entry name" value="Plug_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037066">
        <property type="entry name" value="Plug_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000531">
        <property type="entry name" value="TonB-dep_rcpt_b-brl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011276">
        <property type="entry name" value="TonB_haem/Hb_rcpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036942">
        <property type="entry name" value="TonB_rcpt_b-brl_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30069">
        <property type="entry name" value="PTHR30069"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07715">
        <property type="entry name" value="Plug"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00593">
        <property type="entry name" value="TonB_dep_Rec"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01785">
        <property type="entry name" value="TonB-hemin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0998">Cell outer membrane</keyword>
    <keyword evidence="4 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-0675">Receptor</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0798">TonB box</keyword>
    <feature type="domain" description="Plug" evidence="8">
        <location>
            <begin position="51"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="domain" description="TonB_dep_Rec" evidence="7">
        <location>
            <begin position="249"/>
            <end position="685"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004442"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023077"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023237"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003357"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00593"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF07715"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ65607.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="690" mass="75015" checksum="F91728C4C60607B7" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTI2</accession>
    <name>A0A0M6ZTI2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Glutamine transport ATP-binding protein GlnQ</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">glnQ_3</name>
        <name evidence="5" type="ORF">LAX5112_00865</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66089.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00865"/>
    <dbReference type="EnsemblBacteria" id="CTQ66089">
        <property type="protein sequence ID" value="CTQ66089"/>
        <property type="gene ID" value="LAX5112_00865"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="25"/>
            <end position="251"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="57"/>
            <end position="64"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ66089.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="259" mass="28000" checksum="65A509B8E65964D2" modified="2015-12-09" version="1">MRNLVQDTPSAPSITAMPDAREVLLETRGLGFETNGHRLLFDVDLKIRRGSRTVIMGPNGAGKSLLLRLMHGLISPTHGDVLWRGHALNKTGRKDQAMVFQRPVLLRRSAKANLKFAFGVRGEKGGKRNGLIQKALAAAGLSHLANRPARILSGGEQQRLATVRALTCQPDILFLDEPTASLDPASTAAIEQLILEANANGITIVLVTHDAGQASRLGQELIFLQDGEIAETGPAQRVLKIPQSPPARALRDGQLYVRN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTP3</accession>
    <name>A0A0M6ZTP3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Neu5Ac permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">siaT_8</name>
        <name evidence="5" type="ORF">LAX5112_00887</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66149.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670779.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00887"/>
    <dbReference type="EnsemblBacteria" id="CTQ66149">
        <property type="protein sequence ID" value="CTQ66149"/>
        <property type="gene ID" value="LAX5112_00887"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010656">
        <property type="entry name" value="DctM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004681">
        <property type="entry name" value="TRAP_DctM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33362">
        <property type="entry name" value="PTHR33362"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06808">
        <property type="entry name" value="DctM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="24"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="58"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="87"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="115"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="144"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="173"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="223"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="248"/>
            <end position="265"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="277"/>
            <end position="301"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="321"/>
            <end position="340"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="347"/>
            <end position="365"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="371"/>
            <end position="397"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="418"/>
            <end position="439"/>
        </location>
    </feature>
    <feature type="domain" description="DctM" evidence="4">
        <location>
            <begin position="13"/>
            <end position="435"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF06808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ66149.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="446" mass="48476" checksum="DDE761F6A0D8DE1C" modified="2015-12-09" version="1">MSYEMIALLMFSSMMLMLLTGQRVFGAIGGIAAIAAISLWGVGGQDIPFSAAMKLMKWYPLLTLPMFIFMGYILSETKIADDLYKMFHVWMGPLNGGLAIGTILLMVLISAMNGLSVAGMAIGATIALPELLKRGYDKRMVTGVIQAGASLGILVPPSVVLVLYAMIARAPVGQLWLAGIIPGLMMAAMFIVYIAVRCKLQPNLGPALTIEEREASKEEKYRLLLAGLLPLIIFAVMMVPFVNGWTSLVESSAIGALAALVAAIIKRRMTTDILILCLRNTLGISCMFMWIILAALGFGAVFDGLGAVKAIENLFTEQLGLSPWMILILMQLSFLVMGTFLDDTAMLVIVAPLYVPLVATLDLGMPVGQVLIWYGVLYTITTQIAYMTPPFGYNLFLMRAMAPKDITMRDIYGSITPFVLVMALALALVMAFPQIALWLPELVYSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZU57</accession>
    <name>A0A0M6ZU57_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Aldehyde dehydrogenase (NAD(+))</fullName>
            <ecNumber evidence="5">1.2.1.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">aldHT</name>
        <name evidence="10" type="ORF">LAX5112_00754</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="1">Homotetramer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the aldehyde dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.2.1.3" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65782.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670838.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ65782">
        <property type="protein sequence ID" value="CTQ65782"/>
        <property type="gene ID" value="LAX5112_00754"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004029">
        <property type="term" value="F:aldehyde dehydrogenase (NAD+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043878">
        <property type="term" value="F:glyceraldehyde-3-phosphate dehydrogenase (NAD+) (non-phosphorylating) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.309.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.605.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016161">
        <property type="entry name" value="Ald_DH/histidinol_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016163">
        <property type="entry name" value="Ald_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016160">
        <property type="entry name" value="Ald_DH_CS_CYS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029510">
        <property type="entry name" value="Ald_DH_CS_GLU"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016162">
        <property type="entry name" value="Ald_DH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015590">
        <property type="entry name" value="Aldehyde_DH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044638">
        <property type="entry name" value="ALDH7A1-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43521">
        <property type="entry name" value="PTHR43521"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00171">
        <property type="entry name" value="Aldedh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53720">
        <property type="entry name" value="SSF53720"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00070">
        <property type="entry name" value="ALDEHYDE_DEHYDR_CYS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00687">
        <property type="entry name" value="ALDEHYDE_DEHYDR_GLU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0521">NADP</keyword>
    <keyword evidence="4 8 10" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-0630">Potassium</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aldedh" evidence="9">
        <location>
            <begin position="15"/>
            <end position="471"/>
        </location>
    </feature>
    <feature type="active site" evidence="6">
        <location>
            <position position="246"/>
        </location>
    </feature>
    <feature type="active site" evidence="7">
        <location>
            <position position="280"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00011881"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022958"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00024226"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU003345"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF00171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ65782.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="476" mass="50679" checksum="15C6C6AD45EB7D44" modified="2015-12-09" version="1">MDYKNFIGGAWLATAESTPNVNPSDTTDILGHAAKGTVADLDSAIDASHAAAPEWATSTPQQRFDVLDFIGTEILARKEELGTLLSREEGKTLPEGIGEAARAGQIFKFFAGEALRQTGDRLDSVRPGVEIDITRSPVGVIGLITPWNFPIAIPAWKLAPAICYGNTVILKPAELVPGCAHALVEIISRSGLPAGVVNLVMGRGSELGPRMIDSDKVNAISFTGSVPTGRGIAAACGANLKKVQLEMGGKNPMVVLDDADLELAVDACLNGAFFSTGQRCTASSRLIVTERIHDQFVATLYDRMMALKVGHALETGIQMGPVVDQRQLEQNLSYVEIAGKEGGKVLGGQQMALATKGFFMAPALISETTNAMRINREEVFGPVASVVRVKDYDEALYVANDTEFGLSAGICTTSLKYAQHFKKNAQAGMVMVNLPTAGVDYHVPFGGTKGSSFGSREQGRYAAEFYTTVKTAYTLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUT5</accession>
    <name>A0A0M6ZUT5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Thiol:disulfide interchange protein DsbD</fullName>
            <ecNumber evidence="3">1.8.1.8</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">dsbD_2</name>
        <name evidence="3" type="ORF">LAX5112_00834</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.8.1.8" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66002.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670738.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ66002">
        <property type="protein sequence ID" value="CTQ66002"/>
        <property type="gene ID" value="LAX5112_00834"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047134">
        <property type="term" value="F:protein-disulfide reductase (NAD(P)) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017004">
        <property type="term" value="P:cytochrome complex assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003834">
        <property type="entry name" value="Cyt_c_assmbl_TM_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02683">
        <property type="entry name" value="DsbD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="54"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="89"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="127"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="171"/>
            <end position="193"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="213"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="domain" description="DsbD" evidence="2">
        <location>
            <begin position="9"/>
            <end position="223"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02683"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ66002.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="244" mass="25806" checksum="7B551544C34BA38D" modified="2015-12-09" version="1">MLEVSWGAAFLAGLLSFVSPCVLPIVPPYLCYLAGVSVDELKGNTAAATTGRRVVFAAIAFVLGFSAVFVALGATASVIGQSIARYYDILSYIAGTIIIIMGLHFLGIFRIGLLFREARVHVEKKPAGLVGAFIMGLAFAFGWTPCVGPVLAAILFVAGSSETTWHGAGLLAVYALGIGIPFILAAAFASQFLGWASRFRKHMGTIEKIMGGFLVLTGILFITGQMSAIAFWLLETFPVFSQIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUY5</accession>
    <name>A0A0M6ZUY5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1 4">Imidazolonepropionase</fullName>
            <ecNumber evidence="1 4">3.5.2.7</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">Imidazolone-5-propionate hydrolase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="4 6" type="primary">hutI</name>
        <name evidence="6" type="ORF">LAX5112_00852</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Catalyzes the hydrolytic cleavage of the carbon-nitrogen bond in imidazolone-5-propanoate to yield N-formimidoyl-L-glutamate. It is the third step in the universal histidine degradation pathway.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>4-imidazolone-5-propanoate + H2O = N-formimidoyl-L-glutamate</text>
            <dbReference type="Rhea" id="RHEA:23660"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:58928"/>
            <dbReference type="ChEBI" id="CHEBI:77893"/>
            <dbReference type="EC" id="3.5.2.7"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="4">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <cofactor evidence="4">
            <name>Fe(3+)</name>
            <dbReference type="ChEBI" id="CHEBI:29034"/>
        </cofactor>
        <text evidence="4">Binds 1 zinc or iron ion per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="4">Amino-acid degradation; L-histidine degradation into L-glutamate; N-formimidoyl-L-glutamate from L-histidine: step 3/3.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the metallo-dependent hydrolases superfamily. HutI family.</text>
    </comment>
    <dbReference type="EC" id="3.5.2.7" evidence="1 4"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66052.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670754.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00852"/>
    <dbReference type="EnsemblBacteria" id="CTQ66052">
        <property type="protein sequence ID" value="CTQ66052"/>
        <property type="gene ID" value="LAX5112_00852"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00379">
        <property type="reaction ID" value="UER00551"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050480">
        <property type="term" value="F:imidazolonepropionase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019556">
        <property type="term" value="P:histidine catabolic process to glutamate and formamide"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019557">
        <property type="term" value="P:histidine catabolic process to glutamate and formate"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd01296">
        <property type="entry name" value="Imidazolone-5PH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00372">
        <property type="entry name" value="HutI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006680">
        <property type="entry name" value="Amidohydro-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005920">
        <property type="entry name" value="HutI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011059">
        <property type="entry name" value="Metal-dep_hydrolase_composite"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032466">
        <property type="entry name" value="Metal_Hydrolase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42752">
        <property type="entry name" value="PTHR42752"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01979">
        <property type="entry name" value="Amidohydro_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51338">
        <property type="entry name" value="SSF51338"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51556">
        <property type="entry name" value="SSF51556"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01224">
        <property type="entry name" value="hutI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2 4" id="KW-0369">Histidine metabolism</keyword>
    <keyword evidence="4 6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3 4" id="KW-0408">Iron</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Amidohydro-rel" evidence="5">
        <location>
            <begin position="61"/>
            <end position="379"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="70"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="72"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="79"/>
        </location>
        <ligand>
            <name>4-imidazolone-5-propanoate</name>
            <dbReference type="ChEBI" id="CHEBI:77893"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="142"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="175"/>
        </location>
        <ligand>
            <name>4-imidazolone-5-propanoate</name>
            <dbReference type="ChEBI" id="CHEBI:77893"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="240"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="243"/>
        </location>
        <ligand>
            <name>4-imidazolone-5-propanoate</name>
            <dbReference type="ChEBI" id="CHEBI:77893"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="315"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="317"/>
        </location>
        <ligand>
            <name>N-formimidoyl-L-glutamate</name>
            <dbReference type="ChEBI" id="CHEBI:58928"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="319"/>
        </location>
        <ligand>
            <name>N-formimidoyl-L-glutamate</name>
            <dbReference type="ChEBI" id="CHEBI:58928"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="320"/>
        </location>
        <ligand>
            <name>4-imidazolone-5-propanoate</name>
            <dbReference type="ChEBI" id="CHEBI:77893"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012864"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00372"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF01979"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ66052.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="401" mass="42502" checksum="FC6865A9894AF23E" modified="2015-12-09" version="1">MPQRLLTNAKLVTLTETGDSYGLIEDGVLAIDSETIGYAGPATNLPESFADFPNENLNGRLVTPGLIDCHTHVVFGGDRAREFEMRLEGASYEEVARAGGGIVSTVKATRSASEDELLKGALSRVDALIAEGVTGIEIKSGYGLDQETELKMLRVARKVGSLRPITIRTTFLGAHAVPADYKDRADAYLSEVCLPALEAAQAEGLVDAVDGFCEGIAFSPAQIAKVFDKAVELSLPIKLHAEQLSNLGGTALAASYGALSADHLEYLDEAGVKAMACSGTVAVILPGAFYTLRETQSPPVDLLRRYKVPMALATDCNPGSSPLASLLLTMNMGCTLFRMTPEEALAGVTREAAKALGLTDRGTLKAGKRADLAIWNVQHPAELSYRIGFNALEKRIFGGAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZV30</accession>
    <name>A0A0M6ZV30_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Hydroxyquinol 1,2-dioxygenase</fullName>
            <ecNumber evidence="9">1.13.11.37</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">chqB</name>
        <name evidence="9" type="ORF">LAX5112_00803</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Fe(3+)</name>
            <dbReference type="ChEBI" id="CHEBI:29034"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the intradiol ring-cleavage dioxygenase family.</text>
    </comment>
    <dbReference type="EC" id="1.13.11.37" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65920.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670718.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00803"/>
    <dbReference type="EnsemblBacteria" id="CTQ65920">
        <property type="protein sequence ID" value="CTQ65920"/>
        <property type="gene ID" value="LAX5112_00803"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047074">
        <property type="term" value="F:4-hydroxycatechol 1,2-dioxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018576">
        <property type="term" value="F:catechol 1,2-dioxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008199">
        <property type="term" value="F:ferric iron binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018581">
        <property type="term" value="F:hydroxyquinol 1,2-dioxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009712">
        <property type="term" value="P:catechol-containing compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.130.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007535">
        <property type="entry name" value="Catechol_dOase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000627">
        <property type="entry name" value="Intradiol_dOase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015889">
        <property type="entry name" value="Intradiol_dOase_core"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00775">
        <property type="entry name" value="Dioxygenase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04444">
        <property type="entry name" value="Dioxygenase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49482">
        <property type="entry name" value="SSF49482"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 9" id="KW-0223">Dioxygenase</keyword>
    <keyword evidence="6" id="KW-0408">Iron</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5 9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Dioxygenase_N" evidence="8">
        <location>
            <begin position="22"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="domain" description="INTRADIOL_DIOXYGENAS" evidence="7">
        <location>
            <begin position="118"/>
            <end position="274"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001965"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022964"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00775"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF04444"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ65920.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="289" mass="32042" checksum="001B9EDBDBE6E1A4" modified="2015-12-09" version="1">MRSVTKDNITDVFMNYFGPDTDPRLREILQSLVTHLHNFARETNLTHAEWRKGIEFLEWAGDISDKERHEFVLLSDVLGLSSLVDMLHSHPEGTSSSVLGPFHITGSPPLPIGGDLRGDFKEQVLLAQGVVRDMDGNPIEGAELDIWQTAPNGLYSSQDPDQDTYSFHGIQTTGADGRYAFTSVKPVSYTVPSDGPVGDILRASGRHPWRPSHLHYIVTAPGFRPLVTEIFPDDDPYLDEDTVFGVRDDLVMTYVEKPAGSFPADGFDLSGKVDGPYLLADFDLVLVRE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZV76</accession>
    <name>A0A0M6ZV76_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">p-aminobenzoyl-glutamate hydrolase subunit B</fullName>
            <ecNumber evidence="1">3.5.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">abgB</name>
        <name evidence="1" type="ORF">LAX5112_00615</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.5.1.-" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65424.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670571.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00615"/>
    <dbReference type="EnsemblBacteria" id="CTQ65424">
        <property type="protein sequence ID" value="CTQ65424"/>
        <property type="gene ID" value="LAX5112_00615"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017439">
        <property type="entry name" value="Amidohydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017145">
        <property type="entry name" value="Aminobenzoyl-glu_utiliz_pB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036264">
        <property type="entry name" value="Bact_exopeptidase_dim_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002933">
        <property type="entry name" value="Peptidase_M20"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01546">
        <property type="entry name" value="Peptidase_M20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF037227">
        <property type="entry name" value="Aminobenzoyl-glu_utiliz_pB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55031">
        <property type="entry name" value="SSF55031"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01891">
        <property type="entry name" value="amidohydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ65424.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="474" mass="50785" checksum="E15492848FF1540B" modified="2015-12-09" version="1">MKNTDRVWDLVDSRREDYIGLSDRVFDLPEIAYTEFKSVAEHKKMLEQEGFRITEGVAGIPTAIVGEAGDEGPVIAILGEFDALPELGQVAGIAEHQPVEAGGPGHGCGHNLLGSAALMAASAVKDYLAERGLKGRVRYYGCPAEEGGAAKTFMVRAGLFDDVDAAISWHPATFTGVNEAKSLANTRIDFTFHGRAAHAAGAPELGRSALDAIELMNVGVNYMREHMPDDARVHYAYLDAGGIAPNVVQSKATVRQLVRARNLKELRDLIGRVHKIAEGAALMTETTVESSVVSGVSNLLGNRPLEETMQRNLDRLGAPDFDETDRIFANKIRETLSEDNIHVSFRRIGAEVDPDLALCDFVAPLDRKSEGGEGSTDVGDVSWAVPTVQARVATCAVGTPFHTWQLTAQGKAPAAHKGMVQAAKIMAGTAVDLFEDTGVLNQAVDAHKATLAKDPYACPIPEEVAPPLKAMSNQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZV86</accession>
    <name>A0A0M6ZV86_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 11">DNA-directed RNA polymerase subunit omega</fullName>
            <shortName evidence="11">RNAP omega subunit</shortName>
            <ecNumber evidence="2 11">2.7.7.6</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10 11">RNA polymerase omega subunit</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="9 11">Transcriptase subunit omega</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11 12" type="primary">rpoZ</name>
        <name evidence="12" type="ORF">LAX5112_01057</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11">Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8 11">
            <text>a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate + RNA(n+1)</text>
            <dbReference type="Rhea" id="RHEA:21248"/>
            <dbReference type="Rhea" id="RHEA-COMP:14527"/>
            <dbReference type="Rhea" id="RHEA-COMP:17342"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:61557"/>
            <dbReference type="ChEBI" id="CHEBI:140395"/>
            <dbReference type="EC" id="2.7.7.6"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="11">The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 11">Belongs to the RNA polymerase subunit omega family.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.6" evidence="2 11"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66685.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008197301.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01057"/>
    <dbReference type="EnsemblBacteria" id="CTQ66685">
        <property type="protein sequence ID" value="CTQ66685"/>
        <property type="gene ID" value="LAX5112_01057"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000428">
        <property type="term" value="C:DNA-directed RNA polymerase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003899">
        <property type="term" value="F:DNA-directed 5'-3' RNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006351">
        <property type="term" value="P:transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.940.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00366">
        <property type="entry name" value="RNApol_bact_RpoZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003716">
        <property type="entry name" value="DNA-dir_RNA_pol_omega"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006110">
        <property type="entry name" value="Pol_omega/Rpo6/RPB6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036161">
        <property type="entry name" value="RPB6/omega-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34476">
        <property type="entry name" value="PTHR34476"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01192">
        <property type="entry name" value="RNA_pol_Rpb6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01409">
        <property type="entry name" value="RNA_pol_Rpb6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63562">
        <property type="entry name" value="SSF63562"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00690">
        <property type="entry name" value="rpoZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 11 12" id="KW-0240">DNA-directed RNA polymerase</keyword>
    <keyword evidence="6 11 12" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 11" id="KW-0804">Transcription</keyword>
    <keyword evidence="5 11 12" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006711"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00013725"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00024550"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00029924"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00030998"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00366"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ66685.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="133" mass="14866" checksum="E7D2503F95F7CC65" modified="2015-12-09" version="1">MARVTVEDCIDKVENRFELVLIAAHRARMISSGSPLTIDRDNDKNPVVALREIAEQTVSPEDMKEDLIHSLQKFVEVDEPEAESVPVVAVPGQQQVTQVNNVDDSAVEFDRMTEEDLLRGLEGLVPPERTDDI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZW71</accession>
    <name>A0A0M6ZW71_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Na(+)-translocating NADH-quinone reductase subunit F</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_00991</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66501.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670898.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00991"/>
    <dbReference type="EnsemblBacteria" id="CTQ66501">
        <property type="protein sequence ID" value="CTQ66501"/>
        <property type="gene ID" value="LAX5112_00991"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00207">
        <property type="entry name" value="fer2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.480">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036010">
        <property type="entry name" value="2Fe-2S_ferredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001041">
        <property type="entry name" value="2Fe-2S_ferredoxin-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012675">
        <property type="entry name" value="Beta-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027980">
        <property type="entry name" value="RACo_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040506">
        <property type="entry name" value="RACo_linker"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041414">
        <property type="entry name" value="Raco_middle"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042259">
        <property type="entry name" value="Raco_middle_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00111">
        <property type="entry name" value="Fer2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14574">
        <property type="entry name" value="RACo_C_ter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17650">
        <property type="entry name" value="RACo_linker"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17651">
        <property type="entry name" value="Raco_middle"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54292">
        <property type="entry name" value="SSF54292"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51085">
        <property type="entry name" value="2FE2S_FER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="2Fe-2S ferredoxin-type" evidence="2">
        <location>
            <begin position="9"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="658"/>
            <end position="678"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ66501.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="678" mass="72608" checksum="56FF7C2DFDE65D61" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZX59</accession>
    <name>A0A0M6ZX59_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Glutathione import ATP-binding protein GsiA</fullName>
            <ecNumber evidence="8">3.6.3.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">gsiA_1</name>
        <name evidence="8" type="ORF">LAX5112_01338</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.-" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67339.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671154.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01338"/>
    <dbReference type="EnsemblBacteria" id="CTQ67339">
        <property type="protein sequence ID" value="CTQ67339"/>
        <property type="gene ID" value="LAX5112_01338"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015833">
        <property type="term" value="P:peptide transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013563">
        <property type="entry name" value="Oligopep_ABC_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08352">
        <property type="entry name" value="oligo_HPY"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ABC transporter" evidence="7">
        <location>
            <begin position="4"/>
            <end position="263"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="7">
        <location>
            <begin position="306"/>
            <end position="561"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="40"/>
            <end position="47"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="350"/>
            <end position="357"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ67339.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="628" mass="68963" checksum="82B1256A1EC62D48" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXZ5</accession>
    <name>A0A0M6ZXZ5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01131</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66890.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670987.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01131"/>
    <dbReference type="EnsemblBacteria" id="CTQ66890">
        <property type="protein sequence ID" value="CTQ66890"/>
        <property type="gene ID" value="LAX5112_01131"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="140"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="207"/>
            <end position="230"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="140"/>
            <end position="165"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66890.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="588" mass="61511" checksum="A46044DDA1DE0413" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZY76</accession>
    <name>A0A0M6ZY76_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF6455 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01300</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67267.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671224.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67267">
        <property type="protein sequence ID" value="CTQ67267"/>
        <property type="gene ID" value="LAX5112_01300"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045601">
        <property type="entry name" value="DUF6455"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20056">
        <property type="entry name" value="DUF6455"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF6455" evidence="1">
        <location>
            <begin position="3"/>
            <end position="79"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF20056"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67267.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="83" mass="9427" checksum="2ABE2D4E7DC80890" modified="2015-12-09" version="1">MNWMDRLNERAELMGRMLDTIGAMKGLPGGVQADVDMETAARRCMSCQETEKCRQWLEHHEDGADAPLKDCANAILFESWLKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0F1</accession>
    <name>A0A0M7A0F1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 7">30S ribosomal protein S11</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7 9" type="primary">rpsK</name>
        <name evidence="9" type="ORF">LAX5112_01749</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Part of the 30S ribosomal subunit. Interacts with proteins S7 and S18. Binds to IF-3.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 7 8">Belongs to the universal ribosomal protein uS11 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68465.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008191596.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01749"/>
    <dbReference type="EnsemblBacteria" id="CTQ68465">
        <property type="protein sequence ID" value="CTQ68465"/>
        <property type="gene ID" value="LAX5112_01749"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01310">
        <property type="entry name" value="Ribosomal_S11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001971">
        <property type="entry name" value="Ribosomal_S11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019981">
        <property type="entry name" value="Ribosomal_S11_bac-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018102">
        <property type="entry name" value="Ribosomal_S11_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036967">
        <property type="entry name" value="Ribosomal_S11_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11759">
        <property type="entry name" value="PTHR11759"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00411">
        <property type="entry name" value="Ribosomal_S11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002131">
        <property type="entry name" value="Ribosomal_S11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03632">
        <property type="entry name" value="uS11_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00054">
        <property type="entry name" value="RIBOSOMAL_S11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 7 8" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="5 7 8" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="4 7" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="3 7" id="KW-0699">rRNA-binding</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00015692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01310"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU003629"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ68465.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="129" mass="13960" checksum="49B06929C60722EF" modified="2015-12-09" version="1">MAKDTTRVRRRERKNISSGVAHVNSTFNNTMITITDAQGNTISWSSAGALGFKGSRKSTPYAAQVAAEDAAKKAAEHGMRTLEVEVRGPGSGRESALRALQAAGFLITSIRDVTPIPHNGCRPRKRRRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0N3</accession>
    <name>A0A0M7A0N3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">pleC_1</name>
        <name evidence="9" type="ORF">LAX5112_01347</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67354.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671162.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01347"/>
    <dbReference type="EnsemblBacteria" id="CTQ67354">
        <property type="protein sequence ID" value="CTQ67354"/>
        <property type="gene ID" value="LAX5112_01347"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00130">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001610">
        <property type="entry name" value="PAC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000014">
        <property type="entry name" value="PAS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000700">
        <property type="entry name" value="PAS-assoc_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035965">
        <property type="entry name" value="PAS-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013655">
        <property type="entry name" value="PAS_fold_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08447">
        <property type="entry name" value="PAS_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00086">
        <property type="entry name" value="PAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55785">
        <property type="entry name" value="SSF55785"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00229">
        <property type="entry name" value="sensory_box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50113">
        <property type="entry name" value="PAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="6" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0808">Transferase</keyword>
    <keyword evidence="6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="52"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="227"/>
            <end position="245"/>
        </location>
    </feature>
    <feature type="domain" description="PAC" evidence="8">
        <location>
            <begin position="336"/>
            <end position="388"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="7">
        <location>
            <begin position="561"/>
            <end position="780"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="445"/>
            <end position="468"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="4">
        <location>
            <begin position="499"/>
            <end position="554"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50113"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ67354.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="790" mass="86158" checksum="834566DB5A152B9E" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1G5</accession>
    <name>A0A0M7A1G5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Polar-differentiation response regulator DivK</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">divK</name>
        <name evidence="3" type="ORF">LAX5112_01852</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68699.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008196858.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01852"/>
    <dbReference type="EnsemblBacteria" id="CTQ68699">
        <property type="protein sequence ID" value="CTQ68699"/>
        <property type="gene ID" value="LAX5112_01852"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="2">
        <location>
            <begin position="4"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="1">
        <location>
            <position position="53"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ68699.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="123" mass="13716" checksum="86F7A6F439968F73" modified="2015-12-09" version="1">MAKTVLIVEDNELNMKLFHDLLEAHGFDTLQTRTGIEALKLARENRPDLILMDIQLPEVSGLEVTKWIKEDESIASIPVVAVTAFAMKGDEERIRQGGCEAYISKPISVSKFLDTVKSFLGEP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1Q2</accession>
    <name>A0A0M7A1Q2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01973</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
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            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
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        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ69018">
        <property type="protein sequence ID" value="CTQ69018"/>
        <property type="gene ID" value="LAX5112_01973"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ69018.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="68" mass="7658" checksum="6D29140536350245" modified="2015-12-09" version="1">MYVLCFNSQSRPPWAASSGYAGHLGQVTDPFFCHLANGFFILDNYEETLMHPLSRKEQQTCHALAPIV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1R0</accession>
    <name>A0A0M7A1R0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01979</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ69028.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ69028">
        <property type="protein sequence ID" value="CTQ69028"/>
        <property type="gene ID" value="LAX5112_01979"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="49"/>
            <end position="73"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69028.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="101" mass="11440" checksum="385BE1140F69BB5A" modified="2015-12-09" version="1">MLSRSLFKKHKRTTLLGICLLSVCVFGLFFVDADNIRTSYRAQWAVELLGVTGALWLFRVAGVLVSFGLVLGLKADFRADKRVDRIVTQRNLLDKSVRRDP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A225</accession>
    <name>A0A0M7A225_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DUF218 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01822</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68647.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671540.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01822"/>
    <dbReference type="EnsemblBacteria" id="CTQ68647">
        <property type="protein sequence ID" value="CTQ68647"/>
        <property type="gene ID" value="LAX5112_01822"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06259">
        <property type="entry name" value="YdcF-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003848">
        <property type="entry name" value="DUF218"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02698">
        <property type="entry name" value="DUF218"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="42"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="domain" description="DUF218" evidence="2">
        <location>
            <begin position="82"/>
            <end position="248"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02698"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ68647.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="268" mass="28946" checksum="32D1D2217D75F645" modified="2015-12-09" version="1">MFFYLSKIAAFFIQPSNFLIALVVVGLVMSMGARLQKWGRRFIWVGALGLVICGFSPAANLLIQPLEDRFSRPAELGSFNGVIILGGAVDTVVTGARGETALTVSGERLTIAARLAKQLPEALIIHTGGQGTIITGQATESEGASRLFDDFGIASQRIILEDESRNTWENAVLTKELVDPKPGQTWLLVTSAYHMPRSMGVFEAAGWTGVTAYPVDYRTRGGADWGLGFDGASKGLRRLDIGVREWIGLTVYWMTGRSSALFPGPGFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2A1</accession>
    <name>A0A0M7A2A1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Sensors of blue-light using FAD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01953</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68969.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671636.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="SMR" id="A0A0M7A2A1"/>
    <dbReference type="EnsemblBacteria" id="CTQ68969">
        <property type="protein sequence ID" value="CTQ68969"/>
        <property type="gene ID" value="LAX5112_01953"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009882">
        <property type="term" value="F:blue light photoreceptor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071949">
        <property type="term" value="F:FAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036046">
        <property type="entry name" value="Acylphosphatase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007024">
        <property type="entry name" value="BLUF_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04940">
        <property type="entry name" value="BLUF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01034">
        <property type="entry name" value="BLUF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54975">
        <property type="entry name" value="SSF54975"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50925">
        <property type="entry name" value="BLUF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="BLUF" evidence="1">
        <location>
            <begin position="3"/>
            <end position="98"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50925"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68969.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="152" mass="17634" checksum="73857F1355C2ED94" modified="2015-12-09" version="1">MELYRACYRSKIKWDNMRLALPDEIDKTLLRIRRINRRAGVTGALLLVDQHIIQVLEGYTGPVLDTVYCVMNDPRLHDIEGIIHEPADYRLFPNSLMFFRDLTDGIAASRHAELRPLLDHPGEVTRDEAYLALSHFAKELREGRMTNDMLMI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2Q2</accession>
    <name>A0A0M7A2Q2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">YARHG domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01795</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68580.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671520.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ68580">
        <property type="protein sequence ID" value="CTQ68580"/>
        <property type="gene ID" value="LAX5112_01795"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025582">
        <property type="entry name" value="YARHG_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13308">
        <property type="entry name" value="YARHG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809091" description="YARHG domain-containing protein" evidence="1">
        <location>
            <begin position="36"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="domain" description="YARHG" evidence="2">
        <location>
            <begin position="41"/>
            <end position="105"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13308"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ68580.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="112" mass="12645" checksum="47CA9CE9145907F9" modified="2015-12-09" version="1">MAKYTCGRLFSVPISRKRVRIALVALLLWPAGVQSQEFTPNESSLGSLTCQQLWYLEQEVLAKARVCLKSQRAQNAFKRAKPCISDEERILPAKVRDYLSAVRETASLKKCS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2Y7</accession>
    <name>A0A0M7A2Y7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Ketosteroid isomerase-related protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01906</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68842.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671600.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ68842">
        <property type="protein sequence ID" value="CTQ68842"/>
        <property type="gene ID" value="LAX5112_01906"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032710">
        <property type="entry name" value="NTF2-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037401">
        <property type="entry name" value="SnoaL-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12680">
        <property type="entry name" value="SnoaL_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54427">
        <property type="entry name" value="SSF54427"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0413">Isomerase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SnoaL-like" evidence="1">
        <location>
            <begin position="7"/>
            <end position="114"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12680"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68842.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="131" mass="14709" checksum="17869A6170AE9AB3" modified="2015-12-09" version="1">MISRQGVRRLFAKQQTDNTGGFFERVRDDVHWEVMGSHPYAGTYTSKSALLEKAVRPLARKLNEGIVLSVEEVYLDGSVAVIELRALSSAKNGMPYTNTYCWVCTFDEDGMISRVRAYLDSALLAQVIDQN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A306</accession>
    <name>A0A0M7A306_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Aerotaxis receptor</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">aer</name>
        <name evidence="2" type="ORF">LAX5112_01890</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68796.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671586.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01890"/>
    <dbReference type="EnsemblBacteria" id="CTQ68796">
        <property type="protein sequence ID" value="CTQ68796"/>
        <property type="gene ID" value="LAX5112_01890"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00130">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000014">
        <property type="entry name" value="PAS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035965">
        <property type="entry name" value="PAS-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013655">
        <property type="entry name" value="PAS_fold_3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08447">
        <property type="entry name" value="PAS_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55785">
        <property type="entry name" value="SSF55785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00229">
        <property type="entry name" value="sensory_box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50112">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0675">Receptor</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PAS" evidence="1">
        <location>
            <begin position="25"/>
            <end position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50112"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68796.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="178" mass="20330" checksum="2E99B83E086429D9" modified="2015-12-09" version="1">MPKNVFLTGRERTFHRDDVIVSKTDLKGRITYANRVFLDVAGYTEKEVLGQPHSLIRHPEMPRCVFKLLWSTLEAGQEIFAYVVNRCKNGDHYWVYAHVTPSFGASGKIISYHSNRRVPDMAIVNEHIVPLYKMLLEEEKRHASRKDGMLASEQMVLGLLEQHGIAYDEFVATLGKAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A370</accession>
    <name>A0A0M7A370_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Urea carboxylase-associated protein 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01969</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ69011.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671687.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01969"/>
    <dbReference type="EnsemblBacteria" id="CTQ69011">
        <property type="protein sequence ID" value="CTQ69011"/>
        <property type="gene ID" value="LAX5112_01969"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018959">
        <property type="entry name" value="DUF1989"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09347">
        <property type="entry name" value="DUF1989"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF1989" evidence="1">
        <location>
            <begin position="46"/>
            <end position="226"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF09347"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69011.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="280" mass="30552" checksum="6CAC1F8776F5B964" modified="2015-12-09" version="1">MTQPVDAADRRAIRPVICYPNDTLPAPDLTLYGKAREGAEKIGEVTVPPREAASIEVPAGCFLKITSIEGPQVGDLNLFNSADLTERFYSGKTRALHGTHVNTGDRLWSNFPTLRPLATVTTDTLDWYGIDEFGGSVHDVIGTRCDPYTGRALGGPDYHHCCHSNLTRALAQTIGMSLEEAENHVHDVLNVFMCTGFTRDTGQYFMKASPVRPGDYLELFAEIGLLAVMSACPGGDCGSEHSSDTAPCYPMLMEVFKPQDGRLTGWQSPDVNPYDRSHGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3D9</accession>
    <name>A0A0M7A3D9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Dimethylsulfonioproprionate demethylase DmdA</fullName>
            <ecNumber evidence="3">2.1.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">dmdA_1</name>
        <name evidence="3" type="ORF">LAX5112_02100</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.1.1.-" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69399.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671765.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02100"/>
    <dbReference type="EnsemblBacteria" id="CTQ69399">
        <property type="protein sequence ID" value="CTQ69399"/>
        <property type="gene ID" value="LAX5112_02100"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1360.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028896">
        <property type="entry name" value="GCST/YgfZ/DmdA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013977">
        <property type="entry name" value="GCV_T_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006222">
        <property type="entry name" value="GCV_T_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029043">
        <property type="entry name" value="GcvT/YgfZ_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027266">
        <property type="entry name" value="TrmE/GcvT_dom1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43757">
        <property type="entry name" value="PTHR43757"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01571">
        <property type="entry name" value="GCV_T"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08669">
        <property type="entry name" value="GCV_T_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101790">
        <property type="entry name" value="SSF101790"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="GCV_T" evidence="1">
        <location>
            <begin position="32"/>
            <end position="263"/>
        </location>
    </feature>
    <feature type="domain" description="GCV_T_C" evidence="2">
        <location>
            <begin position="290"/>
            <end position="368"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01571"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF08669"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ69399.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="375" mass="42042" checksum="E0CA9ADFCBDC9FEA" modified="2015-12-09" version="1">MQVPSLSISRRTRKTPFSRRVQEAGVKAYTVYNHMLLPTVFESVEEDYKHLKSKVQIWDVSCERQVELWGPDAGRLAQMLTPRDLSDMALNRCYYTPMVDETGGMLNDPVTTKLAEDKYWVSVADSDLLFWIKGLAHAFRLEVDVDEPDVSPFAIQGPKAEDLVARVFGERIRSIRFFHYDYVEFEGQRMVLARSGYSKQGGFELYVDGSKWGEPVWDAFMEAGADMDVRAGCPNLIERIEGQLLSYGNDMTRNNTPHECGLGKFCQTQQAIGCVGRDALLRVAVEGPVRQIRSVAIDGDPVPPCNELWPIIGGGRQVGTISSAAYSPDFRTNVAIGMVRMTHWDDGTKVQVDTPHGMRSATVWETPFCNQGGLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3L6</accession>
    <name>A0A0M7A3L6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Virulence-regulating protein VirS</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">virS_1</name>
        <name evidence="5" type="ORF">LAX5112_01972</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ69016.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ69016">
        <property type="protein sequence ID" value="CTQ69016"/>
        <property type="gene ID" value="LAX5112_01972"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032687">
        <property type="entry name" value="AraC-type_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12625">
        <property type="entry name" value="Arabinose_bd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="4">
        <location>
            <begin position="236"/>
            <end position="333"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ69016.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="335" mass="36440" checksum="98714434DBC19061" modified="2015-12-09" version="1">MPRISAYRLKHLGRIYAKEPAVSMPFEMVLSQVGIDPAVLTNPDAKIELTAEALAVQHACHVLGDPTFAARAGLAAPGAKTLLAYLARSSETVRQVLEFAQKYYALEDSDLQFKLTITEKGPVIGLQSGVLAGHQAPRHRELLVCGMYMRIRQIAGPEFGPLALLFEENDPDHCKALCSYVDCKVLCGQPVSGVRLPVGGLDYPIPTADTALLDHLMAHGDARLEKVPQEISSLSSRVMQLVKSRLPGHLPSGDEVAEELCMTRRTLTRHLAAEGTNYKSLAEAARSDMAKQMLLSESSIAQVAFLLDFGDQAAFSVAFKRWTGTTPAQFKRTNG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A456</accession>
    <name>A0A0M7A456_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">C4-dicarboxylate-binding periplasmic protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">dctP_4</name>
        <name evidence="4" type="ORF">LAX5112_02022</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the bacterial solute-binding protein 7 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69206.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671904.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02022"/>
    <dbReference type="EnsemblBacteria" id="CTQ69206">
        <property type="protein sequence ID" value="CTQ69206"/>
        <property type="gene ID" value="LAX5112_02022"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030288">
        <property type="term" value="C:outer membrane-bounded periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071702">
        <property type="term" value="P:organic substance transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.190.170">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018389">
        <property type="entry name" value="DctP_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004682">
        <property type="entry name" value="TRAP_DctP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038404">
        <property type="entry name" value="TRAP_DctP_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33376">
        <property type="entry name" value="PTHR33376"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03480">
        <property type="entry name" value="DctP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006470">
        <property type="entry name" value="DctB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00787">
        <property type="entry name" value="dctP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809118" evidence="3">
        <location>
            <begin position="25"/>
            <end position="335"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ69206.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="335" mass="36930" checksum="37D7D17572AB5A42" modified="2015-12-09" version="1">MRKIAGLTAAVLSSFLFSASHAFAACDEDEIVIKFSHVVAAEGHPKGEMASALADRVNAEMNGTACMQVFPSSQLFDDNQVMEALLLGDVQLAAPSLSKFEAYTLKYRVFDLPFVFSNMDAVTAFTEGKKGQELLGAMSDYGYVGLGYIFNGLKQFSANRPLIAPDNAKGLRFRVQPSDVAVAMVEAMGGAAQKLAFKDVFEALQMGVVDGQENTWSNIYTQRFFEVQDGTTETNHQLLAYLAVTSREWLNSLDEDVRNQFMTIFTEVSEDYNARSNAINEDSKQSIIENGGIVRALTLDQRDDWITIMKPVWDMFRDDIGADVIDAAIASNKAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4P5</accession>
    <name>A0A0M7A4P5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02162</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69561.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ69561">
        <property type="protein sequence ID" value="CTQ69561"/>
        <property type="gene ID" value="LAX5112_02162"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ69561.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="33" mass="3582" checksum="61F77380C91EB839" modified="2015-12-09" version="1">MLGSNYRQVVVALDHADFIHGAILSVDGGWLAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A505</accession>
    <name>A0A0M7A505_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02215</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69697.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671923.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ69697">
        <property type="protein sequence ID" value="CTQ69697"/>
        <property type="gene ID" value="LAX5112_02215"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007332">
        <property type="entry name" value="DUF411"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04214">
        <property type="entry name" value="DUF411"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809452" evidence="1">
        <location>
            <begin position="26"/>
            <end position="156"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69697.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="156" mass="16495" checksum="CA7217AE08F3265D" modified="2015-12-09" version="1">MTIDRRALLQGVVSLCVATPTFASATGTPAIHVLKARGCGCCNAWIDIMRSEGFSVRAEDIPPGLLAREKVTRGIPTQLASCHTALIDGYVVEGHVPAPDVRRLIADRPEAVGLSVPGMPYGSPGMGPETEREAYDVLLVLQDGSFEVFSSYPAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A513</accession>
    <name>A0A0M7A513_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Ribonuclease R</fullName>
            <shortName evidence="4">RNase R</shortName>
            <ecNumber evidence="4">3.1.13.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4 7" type="primary">rnr</name>
        <name evidence="7" type="ORF">LAX5112_01860</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 4">
            <text>Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates.</text>
            <dbReference type="EC" id="3.1.13.1"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the RNR ribonuclease family. RNase R subfamily.</text>
    </comment>
    <dbReference type="EC" id="3.1.13.1" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68714.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671563.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01860"/>
    <dbReference type="EnsemblBacteria" id="CTQ68714">
        <property type="protein sequence ID" value="CTQ68714"/>
        <property type="gene ID" value="LAX5112_01860"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008859">
        <property type="term" value="F:exoribonuclease II activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01895">
        <property type="entry name" value="RNase_R"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040476">
        <property type="entry name" value="CSD2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001900">
        <property type="entry name" value="RNase_II/R"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022966">
        <property type="entry name" value="RNase_II/R_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004476">
        <property type="entry name" value="RNase_II/RNase_R"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011805">
        <property type="entry name" value="RNase_R"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022967">
        <property type="entry name" value="S1_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003029">
        <property type="entry name" value="S1_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17876">
        <property type="entry name" value="CSD2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00773">
        <property type="entry name" value="RNB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00575">
        <property type="entry name" value="S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00955">
        <property type="entry name" value="RNB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00316">
        <property type="entry name" value="S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00358">
        <property type="entry name" value="3_prime_RNase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02063">
        <property type="entry name" value="RNase_R"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01175">
        <property type="entry name" value="RIBONUCLEASE_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50126">
        <property type="entry name" value="S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 4" id="KW-0269">Exonuclease</keyword>
    <keyword evidence="2 4 7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0540">Nuclease</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="S1 motif" evidence="6">
        <location>
            <begin position="651"/>
            <end position="732"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="740"/>
            <end position="781"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="5">
        <location>
            <begin position="1"/>
            <end position="16"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022839"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01895"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50126"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ68714.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="781" mass="85993" checksum="10138DA7C305A038" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5J0</accession>
    <name>A0A0M7A5J0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02282</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69861.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671894.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ69861">
        <property type="protein sequence ID" value="CTQ69861"/>
        <property type="gene ID" value="LAX5112_02282"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025597">
        <property type="entry name" value="DUF4345"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14248">
        <property type="entry name" value="DUF4345"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="9"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="52"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="77"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="106"/>
            <end position="125"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69861.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="141" mass="14250" checksum="0758C5C509F7FEC6" modified="2015-12-09" version="1">MTTPWFDRAILGVAGVTALGVGLAITAVPAGFYAAYDIALGSNPSLLNELRAPGASLTALGALILAGAFLSGVSRFSAALGATVFLAYAFGRFVSMGLDGAPHSGLVTALVVELVIGGLCLLSVVRQTNAVRFSPLKQRAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5Q0</accession>
    <name>A0A0M7A5Q0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Putative MFS-type transporter YcaD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">ycaD</name>
        <name evidence="8" type="ORF">LAX5112_02498</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70408.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672145.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70408">
        <property type="protein sequence ID" value="CTQ70408"/>
        <property type="gene ID" value="LAX5112_02498"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005828">
        <property type="entry name" value="MFS_sugar_transport-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00083">
        <property type="entry name" value="Sugar_tr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="47"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="73"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="98"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="131"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="158"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="202"/>
            <end position="224"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="236"/>
            <end position="253"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="265"/>
            <end position="283"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="289"/>
            <end position="309"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="330"/>
            <end position="349"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="355"/>
            <end position="376"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="7">
        <location>
            <begin position="2"/>
            <end position="379"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="425"/>
            <end position="482"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="432"/>
            <end position="466"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ70408.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="482" mass="51016" checksum="F52323651E9EB04E" modified="2015-12-09" version="1">MAQTLLSVSALLLSVALLIFGHGLQTTLLPLAADRFYFSDFEIGAISSAYFVGMVIGCFGAPLLIMRAGHIRAFAALVSMMSAAAILHPVVVDPVFWVVIRIVSGFCLAGFYMIVESWLNESATNENRGTIMSVYIVILFGALMLGQVSIATMSIASFIPFVIASVTVSLAVMPVSLTTSAQPAPITLVRFRPNQLYKNSPAAFVGVFFVGISQGALLTLTPLYGSQIGLSTNQSAFYAAAIIGGGLIAQWPVGRLSDRMDRRVVLIILGLATAAASTAIVVFSPDVFLIAAGTAVLVGMFSQPLYAIAVAHAFDHAAQEDFVETSSGMLLSFGIGSIIGPLIASVLMGQMGPSGLYVMVVAFNILMAAFIFTRVLTREALTAEEKTDFEYAATAQVGSVISTDELNADDEEYVIPPEEFPAYEDDIYNFDTEASDEPKKDEAEAISADDADGADTSLKDDAPEDGPSETVSEEPAKPAGKT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5Y7</accession>
    <name>A0A0M7A5Y7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Bcr/CflA family efflux transporter</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">ydhC_2</name>
        <name evidence="9" type="ORF">LAX5112_02286</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cell inner membrane</location>
            <topology evidence="7">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the major facilitator superfamily. Bcr/CmlA family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69872.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671896.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02286"/>
    <dbReference type="EnsemblBacteria" id="CTQ69872">
        <property type="protein sequence ID" value="CTQ69872"/>
        <property type="gene ID" value="LAX5112_02286"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042910">
        <property type="term" value="F:xenobiotic transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990961">
        <property type="term" value="P:xenobiotic detoxification by transmembrane export across the plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004812">
        <property type="entry name" value="Efflux_drug-R_Bcr/CmlA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00710">
        <property type="entry name" value="efflux_Bcr_CflA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="7" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3 7" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="54"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="79"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="103"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="138"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="168"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="218"/>
            <end position="245"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="251"/>
            <end position="272"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="284"/>
            <end position="304"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="310"/>
            <end position="330"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="342"/>
            <end position="366"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="372"/>
            <end position="393"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="8">
        <location>
            <begin position="1"/>
            <end position="398"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006236"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU365088"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ69872.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="404" mass="41980" checksum="3708594F10D26353" modified="2015-12-09" version="1">MTAAPATLMSARRTALLGAGLVAVGPISMALYTPAMPALVEFFGTTDGAVKLTLTSYFAGFAATQLVCGPLTDAFGRKPVTILFLGIYLISSVLATFSPTVEFMVAARALQGVGAAIGISVSRAIVRDQFTGQASARIMNTIAMMLALGPAISPTIGGFVLELFGWREVFWCMVIYGVALMAAVTVFQVETNPSPGKHHLNPRQLAINYTTLLKDPRFLAPAILIGCGLGNIYALATVLPFVLIYEVGLSPSVFGLTMILQSGSFILGTVITGQLLKVTDAHKLVPFGLVMLVVASVVMCVMTLTQAPSVASVMAPVGLFVFALAFVLPASFTDSMAPFPHIAGAASSMLGFLQFGGGVAASLIVAVVGDPVLGLAFVLPAMPVAGVVCYLLLRSQDTQHAAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A621</accession>
    <name>A0A0M7A621_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02335</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70051.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671959.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02335"/>
    <dbReference type="EnsemblBacteria" id="CTQ70051">
        <property type="protein sequence ID" value="CTQ70051"/>
        <property type="gene ID" value="LAX5112_02335"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.15.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036866">
        <property type="entry name" value="RibonucZ/Hydroxyglut_hydro"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56281">
        <property type="entry name" value="SSF56281"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ70051.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="286" mass="31767" checksum="347838AA0601DF86" modified="2015-12-09" version="1">MWQSIRCIRPASRFRRGFDGLAAVLFTFFSAILLAGPALAICQVVADAPYKPLRPGEVRVWNANLEPDQVSIRYIGHSTFELETPQGIRIATDYNDIYRPFLPPTIATMNGAHGTHYSLNPDPNIEHLLYGWNRNGGPMDHDIFVGDVRVRNIQTNIRGWDGESRRLGNSIFIFEAADLCIAHLGHLHHRLTENDLLRLGQIDVVFAAIDNSSTLRLDSLMDVLAGISPSMIIPMHFHFAGALPAFMGRATEQGYRIVRAETSSVTVSRSTLPAEKTVYIMMPGGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A698</accession>
    <name>A0A0M7A698_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">4-hydroxy-3-methylbut-2-enyl diphosphate reductase</fullName>
            <shortName evidence="5">HMBPP reductase</shortName>
            <ecNumber evidence="5">1.17.7.4</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 6" type="primary">ispH</name>
        <name evidence="6" type="ORF">LAX5112_02375</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>H2O + isopentenyl diphosphate + 2 oxidized [2Fe-2S]-[ferredoxin] = (2E)-4-hydroxy-3-methylbut-2-enyl diphosphate + 2 H(+) + 2 reduced [2Fe-2S]-[ferredoxin]</text>
            <dbReference type="Rhea" id="RHEA:24488"/>
            <dbReference type="Rhea" id="RHEA-COMP:10000"/>
            <dbReference type="Rhea" id="RHEA-COMP:10001"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:33737"/>
            <dbReference type="ChEBI" id="CHEBI:33738"/>
            <dbReference type="ChEBI" id="CHEBI:128753"/>
            <dbReference type="ChEBI" id="CHEBI:128769"/>
            <dbReference type="EC" id="1.17.7.4"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>dimethylallyl diphosphate + H2O + 2 oxidized [2Fe-2S]-[ferredoxin] = (2E)-4-hydroxy-3-methylbut-2-enyl diphosphate + 2 H(+) + 2 reduced [2Fe-2S]-[ferredoxin]</text>
            <dbReference type="Rhea" id="RHEA:24825"/>
            <dbReference type="Rhea" id="RHEA-COMP:10000"/>
            <dbReference type="Rhea" id="RHEA-COMP:10001"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:33737"/>
            <dbReference type="ChEBI" id="CHEBI:33738"/>
            <dbReference type="ChEBI" id="CHEBI:57623"/>
            <dbReference type="ChEBI" id="CHEBI:128753"/>
            <dbReference type="EC" id="1.17.7.4"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="5">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
        <text evidence="5">Binds 1 [4Fe-4S] cluster per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="5">Isoprenoid biosynthesis; dimethylallyl diphosphate biosynthesis; dimethylallyl diphosphate from (2E)-4-hydroxy-3-methylbutenyl diphosphate: step 1/1.</text>
    </comment>
    <comment type="pathway">
        <text evidence="5">Isoprenoid biosynthesis; isopentenyl diphosphate biosynthesis via DXP pathway; isopentenyl diphosphate from 1-deoxy-D-xylulose 5-phosphate: step 6/6.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the IspH family.</text>
    </comment>
    <dbReference type="EC" id="1.17.7.4" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70137.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02375"/>
    <dbReference type="EnsemblBacteria" id="CTQ70137">
        <property type="protein sequence ID" value="CTQ70137"/>
        <property type="gene ID" value="LAX5112_02375"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00056">
        <property type="reaction ID" value="UER00097"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00059">
        <property type="reaction ID" value="UER00105"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051745">
        <property type="term" value="F:4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050992">
        <property type="term" value="P:dimethylallyl diphosphate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019288">
        <property type="term" value="P:isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016114">
        <property type="term" value="P:terpenoid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd13944">
        <property type="entry name" value="lytB_ispH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00191">
        <property type="entry name" value="IspH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003451">
        <property type="entry name" value="LytB/IspH"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30426">
        <property type="entry name" value="PTHR30426"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02401">
        <property type="entry name" value="LYTB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00216">
        <property type="entry name" value="ispH_lytB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 5" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="3 5" id="KW-0408">Iron</keyword>
    <keyword evidence="4 5" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="5" id="KW-0414">Isoprene biosynthesis</keyword>
    <keyword evidence="2 5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5 6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Substrate binding" evidence="5">
        <location>
            <begin position="240"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="5">
        <location>
            <position position="142"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="25"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="54"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="90"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="112"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="140"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="182"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="212"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="285"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00191"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ70137.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="336" mass="37123" checksum="DC2FACFAF286E43D" modified="2015-12-09" version="1">MSTMTQTATNKPSLEIKLCAPRGFCAGVDRAIQIVELALQKYGQPVYVRHEIVHNKYVVDGLKSKGAIFVEELDEIPAEHAERPVIFSAHGVPKSVPADAQQRNMFYLDATCPLVSKVHKEAEIHFRRERDILLIGHAGHPEVIGTMGQLPQGTVTLIETEDDARRFERERSDRPLAYITQTTLSVDDTAGIVSVLQDRFPDIVAPHKEDICYATTNRQEAVKHVAPGVEAMIVVGAPNSSNSQRLREVAEREGCRVAVLLQRADEINWADFEGVTSLGLTAGASAPETLVEEIISAFDERFDVTVEIVRTAEETIAFNLPRELRDMSAQTEKATG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6D8</accession>
    <name>A0A0M7A6D8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Putative hydrolase YutF</fullName>
            <ecNumber evidence="1">3.-.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yutF</name>
        <name evidence="1" type="ORF">LAX5112_02328</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.-.-.-" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70032.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671954.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02328"/>
    <dbReference type="EnsemblBacteria" id="CTQ70032">
        <property type="protein sequence ID" value="CTQ70032"/>
        <property type="gene ID" value="LAX5112_02328"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006357">
        <property type="entry name" value="HAD-SF_hydro_IIA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006356">
        <property type="entry name" value="HAD-SF_hydro_IIA_hyp3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13344">
        <property type="entry name" value="Hydrolase_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01460">
        <property type="entry name" value="HAD-SF-IIA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01459">
        <property type="entry name" value="HAD-SF-IIA-hyp4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ70032.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="291" mass="31760" checksum="A4205E1D6B81596F" modified="2015-12-09" version="1">MTVSAPLLVDGLHALAPQYKGILCDVWGVLHNGVSAFEEAHVALRRFREETGGHVILITNAPRPAKYVAEMLTSMGVPEEAYDSIVSSGDVTREVLEAQGSKTLLHIGPERDQPLYHNLEATFTSVDEDAEAISCTGFRDDETETPDDYRERLEKLAARNLLMICANPDIVVERGDRLVWCAGALARLYEDLGGEVAILGKPHAPIYEAGLRRLAEHAGQTIAKEDVLAIGDGLPTDIRGAVSQDIDVLFITAGIHASDFGPSEAPEEHLIRKRLIEEGLRARAAIPRLSW</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6J4</accession>
    <name>A0A0M7A6J4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="11">NAD-dependent malic enzyme</fullName>
            <ecNumber evidence="11">1.1.1.39</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">dme</name>
        <name evidence="11" type="ORF">LAX5112_02424</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="3">In the C-terminal section; belongs to the phosphate acetyltransferase and butyryltransferase family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">In the N-terminal section; belongs to the malic enzymes family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.39" evidence="11"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70237.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672032.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02424"/>
    <dbReference type="EnsemblBacteria" id="CTQ70237">
        <property type="protein sequence ID" value="CTQ70237"/>
        <property type="gene ID" value="LAX5112_02424"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016746">
        <property type="term" value="F:acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004471">
        <property type="term" value="F:malate dehydrogenase (decarboxylating) (NAD+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006108">
        <property type="term" value="P:malate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd05311">
        <property type="entry name" value="NAD_bind_2_malic_enz"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10380">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10750">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10950">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046346">
        <property type="entry name" value="Aminiacid_DH-like_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012301">
        <property type="entry name" value="Malic_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037062">
        <property type="entry name" value="Malic_N_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012302">
        <property type="entry name" value="Malic_NAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045213">
        <property type="entry name" value="Malic_NAD-bd_bact_type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012188">
        <property type="entry name" value="ME_PTA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042113">
        <property type="entry name" value="P_AcTrfase_dom1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042112">
        <property type="entry name" value="P_AcTrfase_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002505">
        <property type="entry name" value="PTA_PTB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00390">
        <property type="entry name" value="malic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03949">
        <property type="entry name" value="Malic_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01515">
        <property type="entry name" value="PTA_PTB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF036684">
        <property type="entry name" value="ME_PTA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01274">
        <property type="entry name" value="malic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00919">
        <property type="entry name" value="Malic_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53223">
        <property type="entry name" value="SSF53223"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-0511">Multifunctional enzyme</keyword>
    <keyword evidence="8" id="KW-0521">NADP</keyword>
    <keyword evidence="4 11" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="malic" evidence="10">
        <location>
            <begin position="24"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="domain" description="Malic_M" evidence="9">
        <location>
            <begin position="169"/>
            <end position="406"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="6">
        <location>
            <position position="100"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="82"/>
            <end position="89"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="142"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="143"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="168"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="293"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007686"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008756"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023268"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR036684-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR036684-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR036684-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="SMART" id="SM00919"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="SMART" id="SM01274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ70237.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="767" mass="82952" checksum="A41B296D830A2BD3" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A759</accession>
    <name>A0A0M7A759_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Sodium/glutamate symporter</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1 2" type="primary">gltS</name>
        <name evidence="2" type="ORF">LAX5112_02447</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Catalyzes the sodium-dependent transport of glutamate.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the glutamate:Na(+) symporter (ESS) (TC 2.A.27) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70282.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008192419.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02447"/>
    <dbReference type="EnsemblBacteria" id="CTQ70282">
        <property type="protein sequence ID" value="CTQ70282"/>
        <property type="gene ID" value="LAX5112_02447"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015501">
        <property type="term" value="F:glutamate:sodium symporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015813">
        <property type="term" value="P:L-glutamate transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02062">
        <property type="entry name" value="GltS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004445">
        <property type="entry name" value="GltS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36178">
        <property type="entry name" value="PTHR36178"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03616">
        <property type="entry name" value="Glt_symporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00210">
        <property type="entry name" value="gltS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0029">Amino-acid transport</keyword>
    <keyword evidence="1" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="1" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="1" id="KW-0406">Ion transport</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0915">Sodium</keyword>
    <keyword evidence="1" id="KW-0739">Sodium transport</keyword>
    <keyword evidence="1" id="KW-0769">Symport</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="39"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="98"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="127"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="226"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="252"/>
            <end position="273"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="285"/>
            <end position="310"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="316"/>
            <end position="336"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="348"/>
            <end position="369"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="381"/>
            <end position="404"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02062"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70282.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="406" mass="42646" checksum="523047140719EF4A" modified="2015-12-09" version="1">MNGEVLTLDEFLSFNIAILVYFLGVRLNKQFAFLRHYNIPEPVSGGLMVATLALVAYGVFDKEISFSLGARDYLLYCFFTAIGLNARFSDLAKGGKPLLILLMLTVGYMLFQNVIGTGIAVAMGLPVGFGLLGGTISLVGGHGTAIAWGPRLVEQYGVVGAVEIGAATATLGLIAASLLGGPIGNYLIQVKGGKPDPNRPDEGPVIGIETDEEADTSVTHTGLMRAILVLNIAIGLGVALQEALVYGFNLDLPVFVCCLFCGIILSNTVPLIFKKMIWPARSRSLAVISDLALGIFLTMSLMSLQLWTIAGLAGPMMLILAAQIVGAGVFIIFILFPVMGRDYNASVLGAGFAGFALGATPTAIANMTAVTKQYGPAMQAFLILPLVSAFFVDLANAAIIVLFLGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7W0</accession>
    <name>A0A0M7A7W0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Putative integral membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">LAX5112_02579</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the glycosyltransferase 87 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70697.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672167.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70697">
        <property type="protein sequence ID" value="CTQ70697"/>
        <property type="gene ID" value="LAX5112_02579"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016758">
        <property type="term" value="F:hexosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018584">
        <property type="entry name" value="GT87"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09594">
        <property type="entry name" value="GT87"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="44"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="74"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="139"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="163"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="204"/>
            <end position="227"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="234"/>
            <end position="253"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="298"/>
            <end position="318"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="330"/>
            <end position="358"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="378"/>
            <end position="408"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="1"/>
            <end position="15"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00024033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ70697.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="426" mass="46668" checksum="6760330F1C9C30F4" modified="2015-12-09" version="1">MRLFEGAKARDDVHMKSTGGSNPLTESGTFRYGLRMSNPVADSVLMFTLTFVGAVLVLRFGFEIFKMVFVERPMFPDFVSFWSAGFFAVQGAAVEAYNYQLLNSFQFEEFGQGELPFLYPPTWLMVISPFSMLPYRPSALLFEALQVIALAVACRYLLRDRAILWILIFFPTVISGIIHGQNAVLNTALLAGALGALDRDRPVLAGILIGLLSYKPQLGILIPFALLAGREYRAFASAAVTTLLFATASWVVFGAEVWRAFIETIAFARDWLESGQTPANKYASILGWLRQFGVGNTAGMIVQVGFALASVGVVVWSWRQDLPMTLKGSLLVIGTCLSTPYLLDYDLALLVIPVLLLIQQGNESGYLSFEKLSIALAVFSFLFTSLWGVQMPVTAIGVPSIVLFALVLRRAVVGQRAGFGQTSCPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A859</accession>
    <name>A0A0M7A859_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative secreted protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02257</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69804.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02257"/>
    <dbReference type="EnsemblBacteria" id="CTQ69804">
        <property type="protein sequence ID" value="CTQ69804"/>
        <property type="gene ID" value="LAX5112_02257"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010634">
        <property type="entry name" value="DUF1223"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36057">
        <property type="entry name" value="PTHR36057"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06764">
        <property type="entry name" value="DUF1223"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809187" evidence="1">
        <location>
            <begin position="26"/>
            <end position="257"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69804.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="257" mass="28123" checksum="E887CC96E011B7E7" modified="2015-12-09" version="1">MVGIHTRTARHAVRACFIFICGLFAAGISLNAANAGPQKVVELFTSQGCSSCPPADRLAEQFVQEEADILTLVLPVDYWDYLGWKDTMASPVHSQRQRAYAQKRGDRSVYTPQMVINGEEHVVGSREADVRAALKRAEPLATDVTLKISDMAVEAKVSGELPAGAKMATVYFLRVQDEATVDIGRGENAGREITYVNVVRDLMPMGMWSGGEETFRMAKTKLNLISDARCIILIQVEDNEGPGQIIGAAAMDWKKGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8U9</accession>
    <name>A0A0M7A8U9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 12">UDP-3-O-acyl-N-acetylglucosamine deacetylase</fullName>
            <shortName evidence="12">UDP-3-O-acyl-GlcNAc deacetylase</shortName>
            <ecNumber evidence="4 12">3.5.1.108</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="12">UDP-3-O-[R-3-hydroxymyristoyl]-N-acetylglucosamine deacetylase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="12 13" type="primary">lpxC</name>
        <name evidence="13" type="ORF">LAX5112_02622</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2 12">Catalyzes the hydrolysis of UDP-3-O-myristoyl-N-acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="11 12">
            <text>a UDP-3-O-[(3R)-3-hydroxyacyl]-N-acetyl-alpha-D-glucosamine + H2O = a UDP-3-O-[(3R)-3-hydroxyacyl]-alpha-D-glucosamine + acetate</text>
            <dbReference type="Rhea" id="RHEA:67816"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:30089"/>
            <dbReference type="ChEBI" id="CHEBI:137740"/>
            <dbReference type="ChEBI" id="CHEBI:173225"/>
            <dbReference type="EC" id="3.5.1.108"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 12">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="3 12">Glycolipid biosynthesis; lipid IV(A) biosynthesis; lipid IV(A) from (3R)-3-hydroxytetradecanoyl-[acyl-carrier-protein] and UDP-N-acetyl-alpha-D-glucosamine: step 2/6.</text>
    </comment>
    <comment type="similarity">
        <text evidence="12">Belongs to the LpxC family.</text>
    </comment>
    <dbReference type="EC" id="3.5.1.108" evidence="4 12"/>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70826.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672200.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02622"/>
    <dbReference type="EnsemblBacteria" id="CTQ70826">
        <property type="protein sequence ID" value="CTQ70826"/>
        <property type="gene ID" value="LAX5112_02622"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00359">
        <property type="reaction ID" value="UER00478"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008759">
        <property type="term" value="F:UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0103117">
        <property type="term" value="F:UDP-3-O-acyl-N-acetylglucosamine deacetylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009245">
        <property type="term" value="P:lipid A biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1700.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00388">
        <property type="entry name" value="LpxC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004463">
        <property type="entry name" value="UDP-acyl_GlcNac_deAcase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011334">
        <property type="entry name" value="UDP-acyl_GlcNac_deAcase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015870">
        <property type="entry name" value="UDP-acyl_N-AcGlcN_deAcase_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33694">
        <property type="entry name" value="PTHR33694"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03331">
        <property type="entry name" value="LpxC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="SSF54211"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00325">
        <property type="entry name" value="lpxC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 12 13" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6 12" id="KW-0441">Lipid A biosynthesis</keyword>
    <keyword evidence="5 12" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="10 12" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="7 12" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9 12" id="KW-0862">Zinc</keyword>
    <feature type="active site" description="Proton donor" evidence="12">
        <location>
            <position position="267"/>
        </location>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="83"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="240"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="244"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00002923"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012745"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022556"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00024535"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00388"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="CTQ70826.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="314" mass="34031" checksum="E8D55C7F33C92508" modified="2015-12-09" version="1">MTAYVDRQTTLADQVTLTGIGVHSGKPASITLVPAEACVGVVFSRTDSDSSKEIPALWDKVSATALCTVLDDPSKDGISTVEHLMAALFGMGIDNVIVEIDGPEMPIMDGSSHAFVEAIEQVGIRKLDRGRRYLKVKKTVRVDNGSAWCELHPYDGTKFDITIDFDTPAIGNQKFISDITPDVFRNELCRARTFGYVKDVEQLWKMGFALGSSLENSVAISDDKVLNPEGTRWPDEFARHKALDAVGDLALAGLPILGLYRSFKGGHKMNHSILVRLFEDPSAFEIVESPAFRQVGQVDKGGLAAAAAFGPDVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9R0</accession>
    <name>A0A0M7A9R0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">2-acyl-glycerophospho-ethanolamine acyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02790</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71347.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672338.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02790"/>
    <dbReference type="EnsemblBacteria" id="CTQ71347">
        <property type="protein sequence ID" value="CTQ71347"/>
        <property type="gene ID" value="LAX5112_02790"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016746">
        <property type="term" value="F:acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002123">
        <property type="entry name" value="Plipid/glycerol_acylTrfase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01553">
        <property type="entry name" value="Acyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00563">
        <property type="entry name" value="PlsC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="domain" description="PlsC" evidence="2">
        <location>
            <begin position="66"/>
            <end position="185"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00563"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ71347.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="288" mass="31627" checksum="382B2FD9D7C04A9C" modified="2015-12-09" version="1">MAEIKAVLTILVLTVVSLILIPLQWVAVKLNLPIQKHLPHLWHKIATGLVGIRIHQDGQPAAERPLLIAANHASWVDITVIGSLMPLSFIAKSEVSGWPVFGLFAKLQRTVFVNRTRRSQTAEVADTIAGRMAEGDAMVLFAEGTSNDGNCVLPFRSALLGAATRAAGHDQDTTVWVQPLSIAYQGLFGMPMGRVHRPHVAWYGDMELAGHLWGIFRHGALDVAIQWGEPVRVDPATDRKALTLQLEREVRALTMAALRQKPVERFDSDEIDAPEFFSNEEKTAKAGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9R6</accession>
    <name>A0A0M7A9R6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Polyphosphate kinase 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">LAX5112_02737</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>[phosphate](n) + ATP = [phosphate](n+1) + ADP</text>
            <dbReference type="Rhea" id="RHEA:19573"/>
            <dbReference type="Rhea" id="RHEA-COMP:9859"/>
            <dbReference type="Rhea" id="RHEA-COMP:14280"/>
            <dbReference type="ChEBI" id="CHEBI:16838"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
        </reaction>
        <physiologicalReaction direction="right-to-left" evidence="3">
            <dbReference type="Rhea" id="RHEA:19575"/>
        </physiologicalReaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the polyphosphate kinase 2 (PPK2) family. Class I subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71156.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672286.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02737"/>
    <dbReference type="EnsemblBacteria" id="CTQ71156">
        <property type="protein sequence ID" value="CTQ71156"/>
        <property type="gene ID" value="LAX5112_02737"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008976">
        <property type="term" value="F:polyphosphate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022488">
        <property type="entry name" value="PPK2-related"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022486">
        <property type="entry name" value="PPK2_PA0141"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03976">
        <property type="entry name" value="PPK2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03707">
        <property type="entry name" value="PPK2_P_aer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0418">Kinase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PPK2" evidence="5">
        <location>
            <begin position="84"/>
            <end position="308"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="1"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="4">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009924"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00024500"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF03976"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ71156.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="352" mass="40223" checksum="84D8C7A4892AB4FE" modified="2015-12-09" version="1">MATETLPTTNKTPATAKSGTLTESAKKPAPKRARKAPAQATPAPATAEQKAANDRLHQLAQMRRDPAAINHVFETGEYPYANKMKRAPYEKRKAALQAELLKAQQWVQDTDQRIVLIFEGRDAAGKGGTIKRFNEHLNPRAARVVALQKPTERESKQWYFQRYIENLPSGGEMVFFDRSWYNRAGVERVMGFCSPNQYLEFMRQCPEVERMLVRDGVLMFKYWFSVTSDEQRRRFKQREVDPLKQWKLSPIDKASLDKWDDYTEAKEAMFFYTDTADAPWTIVKSDDKKRARLNCMEHFLSSLPYPGKNTRVVGQPDPLIVGTGHHVIGRDHHILGKTLHPDIKGGRSTNGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AA62</accession>
    <name>A0A0M7AA62_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Octopine permease ATP-binding protein P</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">occP</name>
        <name evidence="6" type="ORF">LAX5112_02552</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70623.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672152.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02552"/>
    <dbReference type="EnsemblBacteria" id="CTQ70623">
        <property type="protein sequence ID" value="CTQ70623"/>
        <property type="gene ID" value="LAX5112_02552"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015424">
        <property type="term" value="F:ABC-type amino acid transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030679">
        <property type="entry name" value="ABC_ATPase_HisP-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF039085">
        <property type="entry name" value="ABC_ATPase_HisP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="8"/>
            <end position="253"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="40"/>
            <end position="47"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ70623.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="257" mass="28375" checksum="09ED495E0820F916" modified="2015-12-09" version="1">MEDVAPAIEVRDLFKRFGPLEVLKGVSMTANKGDVIAIIGGSGSGKSTFLRCINMLELPSAGSVKIHGEAIALKDDRHHGLRPADRKQIERIRSQLAMVFQSFNLWQHMTVLQNVIEVPVHVLGMKRDEAVEIAETLLRRVGLHEKQDVYPAFLSGGQQQRAAIARALAVQPLALLFDEPTSALDPELVGEVLSVIGDLAKENRTMVLVTHEMKFARDVASHVIFLHNGIIEEQGPPDQVFGDPKSERLKQFISSVH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AA73</accession>
    <name>A0A0M7AA73_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02850</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71517.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672373.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ71517">
        <property type="protein sequence ID" value="CTQ71517"/>
        <property type="gene ID" value="LAX5112_02850"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71517.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="66" mass="7217" checksum="EBB972493C0E5F2D" modified="2015-12-09" version="1">MSQTASQFETLTNASHTEFGETQGRVAESHFYPIMGKNVSIQAIVEGSLLAQIELDPIPEYGIFAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAN8</accession>
    <name>A0A0M7AAN8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Putative metal chaperone YciC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">yciC_3</name>
        <name evidence="4" type="ORF">LAX5112_03086</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the SIMIBI class G3E GTPase family. CobW subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72178.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672572.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03086"/>
    <dbReference type="EnsemblBacteria" id="CTQ72178">
        <property type="protein sequence ID" value="CTQ72178"/>
        <property type="gene ID" value="LAX5112_03086"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1220.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011629">
        <property type="entry name" value="Cbl_biosynth_CobW-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036627">
        <property type="entry name" value="CobW-likC_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003495">
        <property type="entry name" value="CobW/HypB/UreG_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02492">
        <property type="entry name" value="cobW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07683">
        <property type="entry name" value="CobW_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00833">
        <property type="entry name" value="CobW_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CobW C-terminal" evidence="3">
        <location>
            <begin position="259"/>
            <end position="352"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="232"/>
            <end position="260"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="232"/>
            <end position="258"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ72178.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="354" mass="39505" checksum="72422AA74A6D4381" modified="2015-12-09" version="1">MSATQETPAQIPVTVLTGYLGAGKTTLLNRILTENHGQRYAVIVNEFGEVGIDNDLLVESDEEIFEMNNGCICCTVRGDLIRTVQNLMKRKGAFDAIIVETTGVADPAPVAQTFFMDDDVRAAAKLDAVVAVVDARHVLQRLEDTQEAEDQVAFADVILINKTDLVSADELSAVEARIRSINPYAVLHHSERCGVDIAKVLDRGAFDLDRILSLDPHFLEHGHHAHECSPDCDHDHDHDHDHSHDHGHHHHGHEETHSVKSISLTAGDLDPEMFFPWINQVTQIQGPNILRMKGILAFKGDPQRYVIQGVHMIVEGDHQRDWKSDEPRESRLVFIGRDLNWDVLKANFKACAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABN5</accession>
    <name>A0A0M7ABN5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">HPTransfase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03220</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72545.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03220"/>
    <dbReference type="EnsemblBacteria" id="CTQ72545">
        <property type="protein sequence ID" value="CTQ72545"/>
        <property type="gene ID" value="LAX5112_03220"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018762">
        <property type="entry name" value="ChpT_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10090">
        <property type="entry name" value="HPTransfase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HPTransfase" evidence="1">
        <location>
            <begin position="76"/>
            <end position="195"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF10090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72545.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="205" mass="22190" checksum="56977D5D50D5041B" modified="2015-12-09" version="1">MDLAALVASRVCHDIISPVGAITNGLEVLDEEGSEDMREFAMDLIRKSARQASAKLQFARLAFGAAGSAGAEIDLGDAQVVATGFMENEKSNLNWQLERHLMPKNFVKLLLNLILIANQCVPRGGEIKVEMSGTPQSPSFTLNAAGLNPRIPLGMKETLSGEEPERVDAHSVQPIYSLLLARECGMELTIDKDEDCVKITALPTE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABU9</accession>
    <name>A0A0M7ABU9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 6">Isopentenyl-diphosphate Delta-isomerase</fullName>
            <shortName evidence="6">IPP isomerase</shortName>
            <ecNumber evidence="3 6">5.3.3.2</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">IPP:DMAPP isomerase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">Isopentenyl pyrophosphate isomerase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6 9" type="primary">idi</name>
        <name evidence="9" type="ORF">LAX5112_02958</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>isopentenyl diphosphate = dimethylallyl diphosphate</text>
            <dbReference type="Rhea" id="RHEA:23284"/>
            <dbReference type="ChEBI" id="CHEBI:57623"/>
            <dbReference type="ChEBI" id="CHEBI:128769"/>
            <dbReference type="EC" id="5.3.3.2"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="6">Binds 1 Mg(2+) ion per subunit. The magnesium ion binds only when substrate is bound.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
        <text evidence="6">Binds 1 Mn(2+) ion per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="1 6">Isoprenoid biosynthesis; dimethylallyl diphosphate biosynthesis; dimethylallyl diphosphate from isopentenyl diphosphate: step 1/1.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the IPP isomerase type 1 family.</text>
    </comment>
    <dbReference type="EC" id="5.3.3.2" evidence="3 6"/>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71876.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672542.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02958"/>
    <dbReference type="EnsemblBacteria" id="CTQ71876">
        <property type="protein sequence ID" value="CTQ71876"/>
        <property type="gene ID" value="LAX5112_02958"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00059">
        <property type="reaction ID" value="UER00104"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004452">
        <property type="term" value="F:isopentenyl-diphosphate delta-isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050992">
        <property type="term" value="P:dimethylallyl diphosphate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008299">
        <property type="term" value="P:isoprenoid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00202">
        <property type="entry name" value="Idi"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011876">
        <property type="entry name" value="IsopentenylPP_isomerase_typ1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015797">
        <property type="entry name" value="NUDIX_hydrolase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000086">
        <property type="entry name" value="NUDIX_hydrolase_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00293">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF018427">
        <property type="entry name" value="Isopntndiph_ism"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55811">
        <property type="entry name" value="SSF55811"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02150">
        <property type="entry name" value="IPP_isom_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51462">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 6 9" id="KW-0413">Isomerase</keyword>
    <keyword evidence="4 6" id="KW-0414">Isoprene biosynthesis</keyword>
    <keyword evidence="6" id="KW-0460">Magnesium</keyword>
    <keyword evidence="6" id="KW-0464">Manganese</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nudix hydrolase" evidence="8">
        <location>
            <begin position="29"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="active site" evidence="6 7">
        <location>
            <position position="65"/>
        </location>
    </feature>
    <feature type="active site" evidence="6 7">
        <location>
            <position position="112"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="25"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="31"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="67"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="85"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="110"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="112"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004826"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007579"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012057"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00202"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR018427-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51462"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ71876.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="177" mass="19879" checksum="A387FDE61B366D88" modified="2015-12-09" version="1">MNKPLIIPAVAPDGSFYPVEKLQAHIDGVLHLAVSVFVFDGDHLLIQKRAVGKYHCGGQWANTCCSHPHWDESVETCAERRLMDELGFTLPLTRHQTVEYEASVGEGLKEHERVTLFSAQVDRSKLIVAPNPDEVEDVRWVTAADLHCEVLDNPNAFTPWFRIYLGRFPGLKFQAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACK4</accession>
    <name>A0A0M7ACK4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03156</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72367.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451032.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03156"/>
    <dbReference type="EnsemblBacteria" id="CTQ72367">
        <property type="protein sequence ID" value="CTQ72367"/>
        <property type="gene ID" value="LAX5112_03156"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.280.50">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007420">
        <property type="entry name" value="DUF465"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038444">
        <property type="entry name" value="DUF465_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04325">
        <property type="entry name" value="DUF465"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="7"/>
            <end position="55"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72367.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="59" mass="7078" checksum="917B3A7B4B445965" modified="2015-12-09" version="1">MSMQSHLAELERRHAEMERKIEDALLHPSTDSLKLADMKRRKLKIKDEIERIRKDVTIH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACR5</accession>
    <name>A0A0M7ACR5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Ubiquinone/menaquinone biosynthesis methyltransferase ubiE</fullName>
            <ecNumber evidence="2">2.1.1.163</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ubiE_6</name>
        <name evidence="2" type="ORF">LAX5112_03364</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.1.1.163" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72915.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672776.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72915">
        <property type="protein sequence ID" value="CTQ72915"/>
        <property type="gene ID" value="LAX5112_03364"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043770">
        <property type="term" value="F:demethylmenaquinone methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102094">
        <property type="term" value="F:S-adenosylmethionine:2-demethylmenaquinol methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102955">
        <property type="term" value="F:S-adenosylmethionine:2-demethylmenaquinol-7 methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102027">
        <property type="term" value="F:S-adenosylmethionine:2-demethylquinol-8 methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041698">
        <property type="entry name" value="Methyltransf_25"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13649">
        <property type="entry name" value="Methyltransf_25"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <keyword evidence="2" id="KW-0830">Ubiquinone</keyword>
    <feature type="domain" description="Methyltransf_25" evidence="1">
        <location>
            <begin position="79"/>
            <end position="174"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13649"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72915.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="241" mass="26721" checksum="3C2B6BE12FCFB17C" modified="2015-12-09" version="1">MSLDFNDVKIPVFERWFGSWQVSVNRRGFEASELSAAYDAEAELWEEKIARLGFPGGYRRLVRAVLPALSCGAGQQLDVMDCGIGTGTLSLAFAAEVRQPYALSAVDISPCMLSEACSNLRDNGVSVDASVSDIRDMPHPGNRFDLVMCAHVIEHLPDPKAALEEIHRVLKPGGHLLLVATRKSWIGAYIQLKWRTHRLSQDKIAGWLEDSGLEVLEVPETGQGRWMQSWSTAFLGRKIIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AD32</accession>
    <name>A0A0M7AD32_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Oligoendopeptidase F, plasmid</fullName>
            <ecNumber evidence="9">3.4.24.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">pepF1</name>
        <name evidence="9" type="ORF">LAX5112_03141</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="6">Binds 1 zinc ion.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the peptidase M3 family.</text>
    </comment>
    <dbReference type="EC" id="3.4.24.-" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72326.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008196801.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03141"/>
    <dbReference type="EnsemblBacteria" id="CTQ72326">
        <property type="protein sequence ID" value="CTQ72326"/>
        <property type="gene ID" value="LAX5112_03141"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004222">
        <property type="term" value="F:metalloendopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1370.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013647">
        <property type="entry name" value="OligopepF_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042088">
        <property type="entry name" value="OligoPept_F_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045090">
        <property type="entry name" value="Pept_M3A_M3B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001567">
        <property type="entry name" value="Pept_M3A_M3B_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011977">
        <property type="entry name" value="Pept_M3B_clade3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11804">
        <property type="entry name" value="PTHR11804"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01432">
        <property type="entry name" value="Peptidase_M3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08439">
        <property type="entry name" value="Peptidase_M3_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02290">
        <property type="entry name" value="M3_fam_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 6 9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5 6" id="KW-0482">Metalloprotease</keyword>
    <keyword evidence="1 6" id="KW-0645">Protease</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Peptidase_M3_N" evidence="8">
        <location>
            <begin position="129"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_M3" evidence="7">
        <location>
            <begin position="213"/>
            <end position="592"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003435"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF01432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF08439"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ72326.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="606" mass="67833" checksum="431F0E81C5347A27" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AD53</accession>
    <name>A0A0M7AD53_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">SprA-related family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03071</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72150.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672562.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03071"/>
    <dbReference type="EnsemblBacteria" id="CTQ72150">
        <property type="protein sequence ID" value="CTQ72150"/>
        <property type="gene ID" value="LAX5112_03071"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021973">
        <property type="entry name" value="SprA-related"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12118">
        <property type="entry name" value="SprA-related"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="226"/>
            <end position="319"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="86"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="142"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="233"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="249"/>
            <end position="265"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="266"/>
            <end position="316"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72150.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="340" mass="35476" checksum="B9C8084D37F65B1A" modified="2015-12-09" version="1">MIGALLSNTPANLLRSSGVAGDAAPGSEEITQNRDGSAVRDSQASPRAVAVRAGAAPILTPQAILALQEADESDAPARRKSQAEPSSDGRQSSAESDQDQAQSSDSAALKSANTQLPANPASSAQEATQQTETDDDANGDGLTEAEEKQVQELKQRDREVRAHEQAHARVGGAYASAPTYTFQQGPDGKRYAVGGEVQIDTSTERTPEATIRKMRVVISAALAPAEPSGQDLKVAQQARSQLSEAQAELRQQKLEELRGDGTDETSEVSGAENSSATRKNSSENVAGANEAESLSTANSGNEDDSGSSTRNRPDTSAIEAYQAALERANDLQQAAGSLFA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADF3</accession>
    <name>A0A0M7ADF3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Probable transcriptional regulatory protein LAX5112_03184</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">pmpR</name>
        <name evidence="6" type="ORF">LAX5112_03184</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the TACO1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72446.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451022.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03184"/>
    <dbReference type="EnsemblBacteria" id="CTQ72446">
        <property type="protein sequence ID" value="CTQ72446"/>
        <property type="gene ID" value="LAX5112_03184"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.200">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.980">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00693">
        <property type="entry name" value="Transcrip_reg_TACO1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017856">
        <property type="entry name" value="Integrase-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002876">
        <property type="entry name" value="Transcrip_reg_TACO1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026564">
        <property type="entry name" value="Transcrip_reg_TACO1-like_dom3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029072">
        <property type="entry name" value="YebC-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12532">
        <property type="entry name" value="PTHR12532"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01709">
        <property type="entry name" value="Transcrip_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75625">
        <property type="entry name" value="SSF75625"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01033">
        <property type="entry name" value="TIGR01033"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2 4" id="KW-0805">Transcription regulation</keyword>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008724"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00693"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ72446.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="248" mass="27121" checksum="BF4416200DFE08C6" modified="2015-12-09" version="1">MAGHSKFKNIMHRKGRQDAVRSKMFSKLSKEITVAAKMGDPDPDSNPRLRLAVNNAKAQSMPKDNIQRAINKSQAGDAESYDEIRYEGYGPAGVAVVVEALTDNRNRSASNIRSYFTKCGGSLGETGSVSFMFDRVGEIIYKPEAGEADAVLEAAIEAGAEDVQSDENGHTIYTAFEDLNDVAKALEEALGEADSTKIIWKPQNLTPVDADKAQTLMKLIDMLEDDDDVQNVYTNFDVDEETMAELAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADS5</accession>
    <name>A0A0M7ADS5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03413</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ73039.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672811.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ73039">
        <property type="protein sequence ID" value="CTQ73039"/>
        <property type="gene ID" value="LAX5112_03413"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022742">
        <property type="entry name" value="Hydrolase_4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12146">
        <property type="entry name" value="Hydrolase_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="domain" description="Hydrolase_4" evidence="2">
        <location>
            <begin position="120"/>
            <end position="253"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF12146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ73039.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="488" mass="53310" checksum="AB1AD04615BAB738" modified="2015-12-09" version="1">MLKFIHRPVLRVLKFAGFTVLGGIVAIIAVAIFYLNGLSDLEPWHTVHLDEDYSADGAVSSFPDYLAMEDRLFAELQDELISKLSFGPKDEVNRFQPDSVSNPLTWPRNWNRSFMIETESPTASVLLLHGMSDSPYSLREIGQSLHEAGANVLGLRLPGHGTAPAALLETKAEDMISATALAARHLKAMQPDKPLYAVGYSNGGALSVVHALRQLEDPSLAKIDRIILLSPAIGVTPAAAYAPVAIQLGHILGVQRLAWSSLGPEYDPYKYTSFAINAGYVTHQLTMEIRSRMDAATADGSVAVLPPILGFSSAVDATVITRDMISNLYAKLPENGSELFLFDTNQFLTKRPLLSDDAADFLDPLVTDTARTYTLRVITNEAPSDRKTVLNTYVPGTNNPAVQRLDLSWPRGVFSLAHISLPFSAEDPLYGIIPQPEISRLQLGALALRGERGISEIPAGDMLRMRWNPFHSIMMSETQSFLGLGAED</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AE48</accession>
    <name>A0A0M7AE48_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03515</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73358.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03515"/>
    <dbReference type="EnsemblBacteria" id="CTQ73358">
        <property type="protein sequence ID" value="CTQ73358"/>
        <property type="gene ID" value="LAX5112_03515"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="37"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="65"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="120"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="155"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="192"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="253"/>
            <end position="273"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="322"/>
            <end position="345"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="351"/>
            <end position="375"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="395"/>
            <end position="420"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="426"/>
            <end position="446"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="467"/>
            <end position="484"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="490"/>
            <end position="507"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73358.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="515" mass="55095" checksum="7125E83FC514A3BE" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AES3</accession>
    <name>A0A0M7AES3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Cell division ATP-binding protein FtsE</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">ftsE_1</name>
        <name evidence="6" type="ORF">LAX5112_03527</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73389.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672895.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03527"/>
    <dbReference type="EnsemblBacteria" id="CTQ73389">
        <property type="protein sequence ID" value="CTQ73389"/>
        <property type="gene ID" value="LAX5112_03527"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015416">
        <property type="term" value="F:ABC-type phosphonate transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd03256">
        <property type="entry name" value="ABC_PhnC_transporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012693">
        <property type="entry name" value="ABC_transpr_PhnC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02315">
        <property type="entry name" value="ABC_phnC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="6" id="KW-0132">Cell division</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="4"/>
            <end position="254"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="37"/>
            <end position="44"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ73389.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="274" mass="29117" checksum="952BD10C937C8018" modified="2015-12-09" version="1">MSAITVKRLSKTFRGGIRALDGVDLTVADGEFVALIGASGSGKSTLIRLISGLVAGDKNSGCCQISIHGHLVQDSGAISKNISATRTGIGVVFQQFNLVPRLSVLTNVLAGLLGKVPVWRGLFGFFSSEEKQLAMRALQRVGIETKARQRAATLSGGQQQRAAIARTIVQGAKIILADEPIASLDPASAKRVMGILSKINEEDGTTVVVSLHQVEYARRYCKRTIAMRAGQIVYDGPSHALTTQFLREIYGEASEELVLPDAEDFGTAPIPATA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AF08</accession>
    <name>A0A0M7AF08_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Cation diffusion facilitator family transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_03398</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72996.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672801.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72996">
        <property type="protein sequence ID" value="CTQ72996"/>
        <property type="gene ID" value="LAX5112_03398"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008324">
        <property type="term" value="F:cation transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1510.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002524">
        <property type="entry name" value="Cation_efflux"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027469">
        <property type="entry name" value="Cation_efflux_TMD_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01545">
        <property type="entry name" value="Cation_efflux"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161111">
        <property type="entry name" value="SSF161111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="12"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="45"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="80"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="122"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="161"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="186"/>
            <end position="207"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008114"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ72996.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="316" mass="33777" checksum="5F865DD1CFAFE85C" modified="2015-12-09" version="1">MASPELLIEQRALKVGKWSNLFMAFAGILASWLSRSDAMLVDGLYSAVNFVSAIAAAGIGARVGLPATRSRPWGHDFDEVLYVTFRSLILIGILVFAGFVSGTKIWTFFTGGDVPELVFGPIVIYSVVIVAICLALAFNYHRAYRKTGQRSAVLKTESRAAMIDGALSIGTGAALLSLPFLKGTPLAPYVPIGDAVIVMVLILVIIWQPLSSFRSTLADLSGTSAPKATYAKVSRVARDLAKEHGYKLHRAAVLQAGRMHFAAIYIDPLKPIEAHEVDLFKDKISGRLEDVVGPTRVEVIVTAHNGLGASPAAASA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFM0</accession>
    <name>A0A0M7AFM0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Formate dehydrogenase</fullName>
            <ecNumber evidence="6">1.17.1.9</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="16" type="ORF">LAX5112_03625</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="17" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>formate + NAD(+) = CO2 + NADH</text>
            <dbReference type="Rhea" id="RHEA:15985"/>
            <dbReference type="ChEBI" id="CHEBI:15740"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="EC" id="1.17.1.9"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Mo-bis(molybdopterin guanine dinucleotide)</name>
            <dbReference type="ChEBI" id="CHEBI:60539"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="3">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">In the C-terminal section; belongs to the prokaryotic molybdopterin-containing oxidoreductase family.</text>
    </comment>
    <dbReference type="EC" id="1.17.1.9" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73689.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672975.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03625"/>
    <dbReference type="EnsemblBacteria" id="CTQ73689">
        <property type="protein sequence ID" value="CTQ73689"/>
        <property type="gene ID" value="LAX5112_03625"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009326">
        <property type="term" value="C:formate dehydrogenase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051537">
        <property type="term" value="F:2 iron, 2 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008863">
        <property type="term" value="F:formate dehydrogenase (NAD+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043546">
        <property type="term" value="F:molybdopterin cofactor binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015942">
        <property type="term" value="P:formate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00207">
        <property type="entry name" value="fer2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd02790">
        <property type="entry name" value="MopB_CT_Formate-Dh_H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd02753">
        <property type="entry name" value="MopB_Formate-Dh-H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036010">
        <property type="entry name" value="2Fe-2S_ferredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001041">
        <property type="entry name" value="2Fe-2S_ferredoxin-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017896">
        <property type="entry name" value="4Fe4S_Fe-S-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017900">
        <property type="entry name" value="4Fe4S_Fe_S_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009010">
        <property type="entry name" value="Asp_de-COase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041925">
        <property type="entry name" value="CT_Formate-Dh_H"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041924">
        <property type="entry name" value="Formate_Dh-H_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006478">
        <property type="entry name" value="Formate_DH_asu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006657">
        <property type="entry name" value="MoPterin_dinucl-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006656">
        <property type="entry name" value="Mopterin_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006963">
        <property type="entry name" value="Mopterin_OxRdtase_4Fe-4S_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006655">
        <property type="entry name" value="Mopterin_OxRdtase_prok_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13183">
        <property type="entry name" value="Fer4_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04879">
        <property type="entry name" value="Molybdop_Fe4S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00384">
        <property type="entry name" value="Molybdopterin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01568">
        <property type="entry name" value="Molydop_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00926">
        <property type="entry name" value="Molybdop_Fe4S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50692">
        <property type="entry name" value="SSF50692"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54292">
        <property type="entry name" value="SSF54292"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01591">
        <property type="entry name" value="Fdh-alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51085">
        <property type="entry name" value="2FE2S_FER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00198">
        <property type="entry name" value="4FE4S_FER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51379">
        <property type="entry name" value="4FE4S_FER_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51669">
        <property type="entry name" value="4FE4S_MOW_BIS_MGD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00490">
        <property type="entry name" value="MOLYBDOPTERIN_PROK_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0001">2Fe-2S</keyword>
    <keyword evidence="12" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="10 12" id="KW-0408">Iron</keyword>
    <keyword evidence="11 12" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="8 12" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="16" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="2Fe-2S ferredoxin-type" evidence="13">
        <location>
            <begin position="2"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="14">
        <location>
            <begin position="138"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="14">
        <location>
            <begin position="177"/>
            <end position="210"/>
        </location>
    </feature>
    <feature type="domain" description="4Fe-4S Mo/W bis-MGD-type" evidence="15">
        <location>
            <begin position="223"/>
            <end position="278"/>
        </location>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="230"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="233"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="237"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="264"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000455"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001942"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00007023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00010312"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00013128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022714"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS51085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS51379"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS51669"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="CTQ73689.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="922" mass="100191" checksum="CAFCD01AD68003E0" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFU1</accession>
    <name>A0A0M7AFU1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Lipoprotein chaperone</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03704</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ73948.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673043.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03704"/>
    <dbReference type="EnsemblBacteria" id="CTQ73948">
        <property type="protein sequence ID" value="CTQ73948"/>
        <property type="gene ID" value="LAX5112_03704"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd16325">
        <property type="entry name" value="LolA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029046">
        <property type="entry name" value="LolA/LolB/LppX"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004564">
        <property type="entry name" value="OM_lipoprot_carrier_LolA-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35869">
        <property type="entry name" value="PTHR35869"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03548">
        <property type="entry name" value="LolA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89392">
        <property type="entry name" value="SSF89392"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809294" evidence="2">
        <location>
            <begin position="33"/>
            <end position="212"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ73948.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="212" mass="23719" checksum="700FC81C1B27055C" modified="2015-12-09" version="1">MLIRFVSRIAKSTIRPVVALAMAAAMTVPALALSDQEQQTLQDLNTYFNSVKTMHGDFIQFGPDGSQSDGKFYMARPGKVRFYYNKPSVLDIVADGKSVSVRDRKLNTQDIWPLGQTPLRFLLSDSIDLQQDTNVTNVLVEEDLVTVTIFDKTKFNSGTLTLIFDAKDYALKQWTVTDQQGYDTSVAVYNVVSNGPSNPDLFKIDYLANSRQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AH09</accession>
    <name>A0A0M7AH09_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 6">30S ribosomal protein S6</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6 8" type="primary">rpsF</name>
        <name evidence="8" type="ORF">LAX5112_03865</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 6">Binds together with S18 to 16S ribosomal RNA.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the bacterial ribosomal protein bS6 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74445.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008188757.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03865"/>
    <dbReference type="EnsemblBacteria" id="CTQ74445">
        <property type="protein sequence ID" value="CTQ74445"/>
        <property type="gene ID" value="LAX5112_03865"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00473">
        <property type="entry name" value="bS6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00360">
        <property type="entry name" value="Ribosomal_S6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000529">
        <property type="entry name" value="Ribosomal_S6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020814">
        <property type="entry name" value="Ribosomal_S6_plastid/chlpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035980">
        <property type="entry name" value="Ribosomal_S6_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014717">
        <property type="entry name" value="Transl_elong_EF1B/ribosomal_S6"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21011">
        <property type="entry name" value="PTHR21011"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01250">
        <property type="entry name" value="Ribosomal_S6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54995">
        <property type="entry name" value="SSF54995"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00166">
        <property type="entry name" value="S6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 6" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="4 6 8" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="6" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="6" id="KW-0699">rRNA-binding</keyword>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="97"/>
            <end position="154"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009512"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00016787"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00360"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ74445.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="154" mass="17066" checksum="A8710AA56BF09C3E" modified="2015-12-09" version="1">MPLYEHIFLARQDVSAQQVETLVEQYKGLIEGAGGTIGKVENWGLRTLAYRIKKNRKAHYTLMNITAPHAAVAEMERQMGLSEDVLRFMTFKVDELDEEPSAMMQKRDRDDRGGRGGGRFGDRGGDRGGRGGDRGGDRGGDRGGDRAPRRAEGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="32" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHH7</accession>
    <name>A0A0M7AHH7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Uridylate kinase</fullName>
            <shortName evidence="6">UK</shortName>
            <ecNumber evidence="6">2.7.4.22</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Uridine monophosphate kinase</fullName>
            <shortName evidence="6">UMP kinase</shortName>
            <shortName evidence="6">UMPK</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8" type="primary">pyrH_2</name>
        <name evidence="6" type="synonym">pyrH</name>
        <name evidence="8" type="ORF">LAX5112_03462</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Catalyzes the reversible phosphorylation of UMP to UDP.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 6">
            <text>ATP + UMP = ADP + UDP</text>
            <dbReference type="Rhea" id="RHEA:24400"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:57865"/>
            <dbReference type="ChEBI" id="CHEBI:58223"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.4.22"/>
        </reaction>
    </comment>
    <comment type="activity regulation">
        <text evidence="6">Inhibited by UTP.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2 6">Pyrimidine metabolism; CTP biosynthesis via de novo pathway; UDP from UMP (UMPK route): step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Homohexamer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 6">Belongs to the UMP kinase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.7.4.22" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73213.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008192166.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03462"/>
    <dbReference type="EnsemblBacteria" id="CTQ73213">
        <property type="protein sequence ID" value="CTQ73213"/>
        <property type="gene ID" value="LAX5112_03462"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00159">
        <property type="reaction ID" value="UER00275"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033862">
        <property type="term" value="F:UMP kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044210">
        <property type="term" value="P:'de novo' CTP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd04254">
        <property type="entry name" value="AAK_UMPK-PyrH-Ec"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1160.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01220_B">
        <property type="entry name" value="PyrH_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036393">
        <property type="entry name" value="AceGlu_kinase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001048">
        <property type="entry name" value="Asp/Glu/Uridylate_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011817">
        <property type="entry name" value="Uridylate_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015963">
        <property type="entry name" value="Uridylate_kinase_bac"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00696">
        <property type="entry name" value="AA_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005650">
        <property type="entry name" value="Uridylate_kin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53633">
        <property type="entry name" value="SSF53633"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02075">
        <property type="entry name" value="pyrH_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 8" id="KW-0418">Kinase</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5 6" id="KW-0665">Pyrimidine biosynthesis</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 8" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="AA_kinase" evidence="7">
        <location>
            <begin position="8"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="13"/>
            <end position="16"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="55"/>
        </location>
        <ligand>
            <name>UMP</name>
            <dbReference type="ChEBI" id="CHEBI:57865"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="56"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="60"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="75"/>
        </location>
        <ligand>
            <name>UMP</name>
            <dbReference type="ChEBI" id="CHEBI:57865"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="136"/>
            <end position="143"/>
        </location>
        <ligand>
            <name>UMP</name>
            <dbReference type="ChEBI" id="CHEBI:57865"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="163"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="164"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="169"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="172"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001018"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004791"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01220"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00696"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ73213.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="240" mass="25379" checksum="947FFF27474E5D32" modified="2015-12-09" version="1">MTSPLRWKRILLKLSGEALMGSQAFGIDPAIVQRIAKEIADAVALGAQVGVVVGGGNIFRGVAVAAKGGNRVTGDHMGMLATIMNSLTLADALRRLKVNARVLSAVAVPSICETFSQRVADRYMEDGDVIIFAGGTGNPFFTTDSGAALRAAEMKCDAFLKGTQVDGVYSEDPKVNPDAERYETLGYDEVISRNLKVMDTTAIALARDNSIPVIVFSIHSPGALVSVLQETGTYTVVGDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHL2</accession>
    <name>A0A0M7AHL2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">barA_2</name>
        <name evidence="7" type="ORF">LAX5112_03912</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74588.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03912"/>
    <dbReference type="EnsemblBacteria" id="CTQ74588">
        <property type="protein sequence ID" value="CTQ74588"/>
        <property type="gene ID" value="LAX5112_03912"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7" id="KW-0418">Kinase</keyword>
    <keyword evidence="3 4" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Histidine kinase" evidence="5">
        <location>
            <begin position="80"/>
            <end position="298"/>
        </location>
    </feature>
    <feature type="domain" description="Response regulatory" evidence="6">
        <location>
            <begin position="461"/>
            <end position="578"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="4">
        <location>
            <position position="510"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ74588.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="580" mass="63348" checksum="30A82D6B58B1074E" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHQ2</accession>
    <name>A0A0M7AHQ2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 7 9">GTPase Der</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">GTP-binding protein EngA</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7 11" type="primary">der</name>
        <name evidence="11" type="ORF">LAX5112_03854</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7 9">GTPase that plays an essential role in the late steps of ribosome biogenesis.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Associates with the 50S ribosomal subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 7 8 9">Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74409.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03854"/>
    <dbReference type="EnsemblBacteria" id="CTQ74409">
        <property type="protein sequence ID" value="CTQ74409"/>
        <property type="gene ID" value="LAX5112_03854"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042254">
        <property type="term" value="P:ribosome biogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00195">
        <property type="entry name" value="GTPase_Der"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031166">
        <property type="entry name" value="G_ENGA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006073">
        <property type="entry name" value="GTP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016484">
        <property type="entry name" value="GTP-bd_EngA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032859">
        <property type="entry name" value="KH_dom-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015946">
        <property type="entry name" value="KH_dom-like_a/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005225">
        <property type="entry name" value="Small_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14714">
        <property type="entry name" value="KH_dom-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01926">
        <property type="entry name" value="MMR_HSR1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006485">
        <property type="entry name" value="GTP-binding_EngA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00326">
        <property type="entry name" value="GTP1OBG"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03594">
        <property type="entry name" value="GTPase_EngA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00231">
        <property type="entry name" value="small_GTP"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51712">
        <property type="entry name" value="G_ENGA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7 9" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="5 7 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 9" id="KW-0677">Repeat</keyword>
    <keyword evidence="3 7" id="KW-0690">Ribosome biogenesis</keyword>
    <feature type="domain" description="EngA-type G" evidence="10">
        <location>
            <begin position="20"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="domain" description="EngA-type G" evidence="10">
        <location>
            <begin position="220"/>
            <end position="395"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="26"/>
            <end position="33"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="73"/>
            <end position="77"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="136"/>
            <end position="139"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="226"/>
            <end position="233"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="273"/>
            <end position="277"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="338"/>
            <end position="341"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
            <label>2</label>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008279"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00020953"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022517"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00195"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU004481"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51712"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ74409.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="492" mass="54642" checksum="3408301FCD7730F7" modified="2015-12-09" version="1">MLKGGILWLIRLLGVNAVGATVAIVGRPNVGKSTLFNRLVGKRLALVDDTPGVTRDRRPGEARLGDLRFTIIDTAGLEDADKASLEGRMRRQTEEAIETADAVLFVIDARAGVTPLDAHFAAVARKTTRPVILLANKAEGRAGVSGLYESFSLGLGEPIAVSAEHGEGLSNLYDALKPHVDRVTEEEDAKREEAVTNVDVDEDGEIVDNEDPVGTIERPLRVAIVGRPNAGKSTLINQMVGEDRMLTGPEAGITRDSISVDWTWHDRHIKLFDTAGIRKKARVQEKLEKLSVADALRAIKFAEVVVVTLDATMSFEKQDLQIIDLVAREGRALVIAVNKWDLIEDREEAWKKIRDANERYFNQIRGVRIVTLSGIQGQGIDRLVEGVFAAYDAWNARVSTAGLNRWLERATTSHPPPAVAGRRVRIRYMTQPKTRPPHFVAFSSRPEQLPESYTRYLINSLREKFDIQGTPIRLSYRKGDNPYAPKKKRKIQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHY8</accession>
    <name>A0A0M7AHY8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Hydroxymethylglutaryl-CoA lyase YngG</fullName>
            <ecNumber evidence="4">4.1.3.4</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">yngG</name>
        <name evidence="4" type="ORF">LAX5112_03945</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the HMG-CoA lyase family.</text>
    </comment>
    <dbReference type="EC" id="4.1.3.4" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74708.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673250.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03945"/>
    <dbReference type="EnsemblBacteria" id="CTQ74708">
        <property type="protein sequence ID" value="CTQ74708"/>
        <property type="gene ID" value="LAX5112_03945"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004419">
        <property type="term" value="F:hydroxymethylglutaryl-CoA lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043594">
        <property type="entry name" value="HMGL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000891">
        <property type="entry name" value="PYR_CT"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42738">
        <property type="entry name" value="PTHR42738"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00682">
        <property type="entry name" value="HMGL-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50991">
        <property type="entry name" value="PYR_CT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0456">Lyase</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Pyruvate carboxyltransferase" evidence="3">
        <location>
            <begin position="5"/>
            <end position="272"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009405"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50991"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ74708.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="286" mass="31058" checksum="D33285EFAFCF0D4E" modified="2015-12-09" version="1">MSEFVTIFEMGPRDGLQNEKRFVPTEDKIALVDRLSECGFRKIEVTSFVSPKWVPQMADAQEVMEGIHRHPAVVYSVLTPNVKGYTAALKVSADEVAIFGSASEGFSNKNINCSVAESIERFKPLLEKARYDEMPVRGYVSCVTDCPYDGPTPPEKVAEVAKILYELGCYEISLGDTIGAGTPETIGRMLDAVLAVVPAEKVAGHYHDTKGRALENIEVSLDKGLRTFDSTIGGLGGCPYAPGAKGNVATEAVAELMQRRGFETGLRLEKLAELTEFAISLRSDTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIB7</accession>
    <name>A0A0M7AIB7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Outer membrane protein OprM</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">oprM</name>
        <name evidence="3" type="ORF">LAX5112_04023</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Lipid-anchor</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74885.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673306.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04023"/>
    <dbReference type="EnsemblBacteria" id="CTQ74885">
        <property type="protein sequence ID" value="CTQ74885"/>
        <property type="gene ID" value="LAX5112_04023"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015562">
        <property type="term" value="F:efflux transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003423">
        <property type="entry name" value="OMP_efflux"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010131">
        <property type="entry name" value="RND_efflux_OM_lipoprot_NodT"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02321">
        <property type="entry name" value="OEP"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01845">
        <property type="entry name" value="outer_NodT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0564">Palmitate</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1134">Transmembrane beta strand</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU362097"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ74885.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="521" mass="56651" checksum="15A8D06EA1A5BCD6" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIC1</accession>
    <name>A0A0M7AIC1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">DUF218 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_03712</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ73970.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008189858.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03712"/>
    <dbReference type="EnsemblBacteria" id="CTQ73970">
        <property type="protein sequence ID" value="CTQ73970"/>
        <property type="gene ID" value="LAX5112_03712"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06259">
        <property type="entry name" value="YdcF-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003848">
        <property type="entry name" value="DUF218"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02698">
        <property type="entry name" value="DUF218"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="49"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="domain" description="DUF218" evidence="3">
        <location>
            <begin position="89"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="40"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF02698"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ73970.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="243" mass="25915" checksum="9ADE38E491995583" modified="2015-12-09" version="1">MTQADPAIDAGGKNGTTLPVTRHDPGGHAPGQSGSCASVTEDSREKRRFALRTFLVACVTVFVVGTTIQFANFANRVSTATVPVSTQADAIVVLTGGQERVSEAVRLLEEGHAGRLLISGVHPGTTRKQIAVVTASAKPLEEGSVELDRVALNTAGNATETANWVRKNGFDSLLVVTSAYHLPRATAELSGALPDVTLIGYPVFAKDLQLEAWHTKPATIRLLIREYVKYTVARLRIAVRSMS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIK1</accession>
    <name>A0A0M7AIK1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6 13">Biotin carboxylase</fullName>
            <ecNumber evidence="5 13">6.3.4.14</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="11 13">Acetyl-coenzyme A carboxylase biotin carboxylase subunit A</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="16" type="primary">accC</name>
        <name evidence="16" type="ORF">LAX5112_03543</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="17" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2 13">This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 13">
            <text>ATP + hydrogencarbonate + N(6)-biotinyl-L-lysyl-[protein] = ADP + H(+) + N(6)-carboxybiotinyl-L-lysyl-[protein] + phosphate</text>
            <dbReference type="Rhea" id="RHEA:13501"/>
            <dbReference type="Rhea" id="RHEA-COMP:10505"/>
            <dbReference type="Rhea" id="RHEA-COMP:10506"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17544"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:83144"/>
            <dbReference type="ChEBI" id="CHEBI:83145"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.4.14"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3 13">Lipid metabolism; malonyl-CoA biosynthesis; malonyl-CoA from acetyl-CoA: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4 13">Acetyl-CoA carboxylase is a heterohexamer of biotin carboxyl carrier protein, biotin carboxylase and the two subunits of carboxyl transferase in a 2:2 complex.</text>
    </comment>
    <dbReference type="EC" id="6.3.4.14" evidence="5 13"/>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73434.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008195221.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03543"/>
    <dbReference type="EnsemblBacteria" id="CTQ73434">
        <property type="protein sequence ID" value="CTQ73434"/>
        <property type="gene ID" value="LAX5112_03543"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00655">
        <property type="reaction ID" value="UER00711"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003989">
        <property type="term" value="F:acetyl-CoA carboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004075">
        <property type="term" value="F:biotin carboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006633">
        <property type="term" value="P:fatty acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:2001295">
        <property type="term" value="P:malonyl-CoA biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1490.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004549">
        <property type="entry name" value="Acetyl_CoA_COase_biotin_COase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011761">
        <property type="entry name" value="ATP-grasp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013815">
        <property type="entry name" value="ATP_grasp_subdomain_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005481">
        <property type="entry name" value="BC-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011764">
        <property type="entry name" value="Biotin_carboxylation_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005482">
        <property type="entry name" value="Biotin_COase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005479">
        <property type="entry name" value="CbamoylP_synth_lsu-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016185">
        <property type="entry name" value="PreATP-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011054">
        <property type="entry name" value="Rudment_hybrid_motif"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02785">
        <property type="entry name" value="Biotin_carb_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00289">
        <property type="entry name" value="Biotin_carb_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02786">
        <property type="entry name" value="CPSase_L_D2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00878">
        <property type="entry name" value="Biotin_carb_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51246">
        <property type="entry name" value="SSF51246"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52440">
        <property type="entry name" value="SSF52440"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00514">
        <property type="entry name" value="accC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50975">
        <property type="entry name" value="ATP_GRASP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50979">
        <property type="entry name" value="BC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00866">
        <property type="entry name" value="CPSASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00867">
        <property type="entry name" value="CPSASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="9 12 13" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="10 13" id="KW-0092">Biotin</keyword>
    <keyword evidence="13" id="KW-0275">Fatty acid biosynthesis</keyword>
    <keyword evidence="13" id="KW-0276">Fatty acid metabolism</keyword>
    <keyword evidence="7 13 16" id="KW-0436">Ligase</keyword>
    <keyword evidence="13" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="13" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="8 12 13" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Biotin carboxylation" evidence="15">
        <location>
            <begin position="1"/>
            <end position="444"/>
        </location>
    </feature>
    <feature type="domain" description="ATP-grasp" evidence="14">
        <location>
            <begin position="120"/>
            <end position="316"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000861"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00003761"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004956"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011750"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00013263"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00017242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023267"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00033786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00409"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU365063"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS50975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS50979"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="CTQ73434.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="447" mass="48936" checksum="6B4E4C240231C42C" modified="2015-12-09" version="1">MFSKILIANRGEIALRILRACKELGISTVAVHSTADADAMHVRLADESVCIGPPAARDSYLNIPQLLAACEITGADAVHPGYGFLSENARFAEILEAHNIVFIGPTSDHIKIMGDKIQAKQTAKDLGIPVVPGSDGAVTPQDDAHAIAREIGYPVLVKAAAGGGGRGMKVAQTEAELDTALSTARSEAKAAFGDDALYMEKYLGKPRHIEIQVLGDGQGNAVHLGERDCSLQRRHQKVLEEAPSPSLNPEQRAEIGEVVASAMRKLKYRGVGTVEFLYENGEFYFIEMNTRLQVEHPVTEMITGIDLVNEQIRIAAGGSLDMTQDDITFDGHAIECRINAEDPQTFAPSPGTITYYHPPGGLGVRVDSGVYQGYKIPPYYDSLIGKLIVHGRNRVECMMRLRRCLDEFVVDEIKSTIPLFRNLVENQDIANGQYDIHWLEQYLANKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIY5</accession>
    <name>A0A0M7AIY5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Lipopolysaccharide export system ATP-binding protein LptB</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="primary">lptB_6</name>
        <name evidence="14" type="ORF">LAX5112_03641</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Part of the ABC transporter complex LptBFG involved in the translocation of lipopolysaccharide (LPS) from the inner membrane to the outer membrane. Probably responsible for energy coupling to the transport system.</text>
    </comment>
    <comment type="subunit">
        <text evidence="11">Component of the lipopolysaccharide transport and assembly complex. The LptBFG transporter is composed of two ATP-binding proteins (LptB) and two transmembrane proteins (LptF and LptG).</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cell inner membrane</location>
            <topology evidence="3">Peripheral membrane protein</topology>
            <orientation evidence="3">Cytoplasmic side</orientation>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
            <orientation evidence="1">Cytoplasmic side</orientation>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the ABC transporter superfamily. Outer membrane lipopolysaccharide export (TC 1.B.42) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73733.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03641"/>
    <dbReference type="EnsemblBacteria" id="CTQ73733">
        <property type="protein sequence ID" value="CTQ73733"/>
        <property type="gene ID" value="LAX5112_03641"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03218">
        <property type="entry name" value="ABC_YhbG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032823">
        <property type="entry name" value="BCA_ABC_TP_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030921">
        <property type="entry name" value="LPS_export_LptB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12399">
        <property type="entry name" value="BCA_ABC_TP_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR04406">
        <property type="entry name" value="LPS_export_lptB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 12 14" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="14" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="9" id="KW-0472">Membrane</keyword>
    <keyword evidence="7 12" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="13">
        <location>
            <begin position="24"/>
            <end position="256"/>
        </location>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <begin position="56"/>
            <end position="63"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004287"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004515"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00010865"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00017803"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00024818"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00026081"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="CTQ73733.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="260" mass="28705" checksum="4EF60DD4958B477A" modified="2015-12-09" version="1">MDNYEFEHGLTGAVAPAEDLSNALVVDGIGKTYGRRQVVKNVGLMVRPGEAVGLLGPNGAGKTTTFYMITGLIRPDQGKIYLEGFDITRMPMYRRARLGIGYLPQEASIFRGLTVEENIRAVLEVIEPNRKQRKEDLDSLLAEFGLTHLRKSPSIALSGGERRRVEIARALASRPSFMLLDEPFAGIDPIAVGDIQQLVRHLTKRGIGVLITDHNVRETLGLIDRAYIIAAGEVLTEGLPRDIVSNPDVRRLYLGEQFTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJZ8</accession>
    <name>A0A0M7AJZ8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">2,3-dimethylmalate lyase</fullName>
            <ecNumber evidence="1">4.1.3.32</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">Dml_1</name>
        <name evidence="1" type="ORF">LAX5112_03760</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="4.1.3.32" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74103.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673081.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03760"/>
    <dbReference type="EnsemblBacteria" id="CTQ74103">
        <property type="protein sequence ID" value="CTQ74103"/>
        <property type="gene ID" value="LAX5112_03760"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047529">
        <property type="term" value="F:2,3-dimethylmalate lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd00377">
        <property type="entry name" value="ICL_PEPM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039556">
        <property type="entry name" value="ICL/PEPM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015813">
        <property type="entry name" value="Pyrv/PenolPyrv_Kinase-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040442">
        <property type="entry name" value="Pyrv_Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51621">
        <property type="entry name" value="SSF51621"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0456">Lyase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ74103.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="290" mass="31501" checksum="5DFABDEF2759F649" modified="2015-12-09" version="1">MPSQADKLRALLAQDTLYVMPCCFDALSAKLIEQAGFDLTFMSGFATSASRIGQPDLGLMSYAEVLDQARNITDAIQIPLIADGDTGYGNAMNLRRTVTGFAKAGAAAVMIEDQLAPKRCGHTPGKAVVSRAEAFDRIRAAQDAKDAGADILILARTDARHDHGLTEAIDRAAKFKELGADILFVEAPKTVEEMQTICRELPGPKMANIVEGGETPELSHKELEDIGFSIAAYPLTLMASAMQAMMGTLAKLKSDEDRTPDLMNFSELRDRIGFNDYYEASAHYETSKRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AK54</accession>
    <name>A0A0M7AK54_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 8">Shikimate dehydrogenase (NADP(+))</fullName>
            <shortName evidence="8">SDH</shortName>
            <ecNumber evidence="3 8">1.1.1.25</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8 12" type="primary">aroE</name>
        <name evidence="12" type="ORF">LAX5112_03781</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 8">
            <text>NADP(+) + shikimate = 3-dehydroshikimate + H(+) + NADPH</text>
            <dbReference type="Rhea" id="RHEA:17737"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16630"/>
            <dbReference type="ChEBI" id="CHEBI:36208"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="EC" id="1.1.1.25"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 8">Metabolic intermediate biosynthesis; chorismate biosynthesis; chorismate from D-erythrose 4-phosphate and phosphoenolpyruvate: step 4/7.</text>
    </comment>
    <comment type="subunit">
        <text evidence="8">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the shikimate dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.25" evidence="3 8"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74163.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673099.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03781"/>
    <dbReference type="EnsemblBacteria" id="CTQ74163">
        <property type="protein sequence ID" value="CTQ74163"/>
        <property type="gene ID" value="LAX5112_03781"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00053">
        <property type="reaction ID" value="UER00087"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050661">
        <property type="term" value="F:NADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004764">
        <property type="term" value="F:shikimate 3-dehydrogenase (NADP+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009073">
        <property type="term" value="P:aromatic amino acid family biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008652">
        <property type="term" value="P:cellular amino acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009423">
        <property type="term" value="P:chorismate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019632">
        <property type="term" value="P:shikimate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00222">
        <property type="entry name" value="Shikimate_DH_AroE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046346">
        <property type="entry name" value="Aminiacid_DH-like_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041121">
        <property type="entry name" value="SDH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011342">
        <property type="entry name" value="Shikimate_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013708">
        <property type="entry name" value="Shikimate_DH-bd_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022893">
        <property type="entry name" value="Shikimate_DH_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006151">
        <property type="entry name" value="Shikm_DH/Glu-tRNA_Rdtase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21089">
        <property type="entry name" value="PTHR21089"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18317">
        <property type="entry name" value="SDH_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01488">
        <property type="entry name" value="Shikimate_DH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08501">
        <property type="entry name" value="Shikimate_dh_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53223">
        <property type="entry name" value="SSF53223"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00507">
        <property type="entry name" value="aroE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 8" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="7 8" id="KW-0057">Aromatic amino acid biosynthesis</keyword>
    <keyword evidence="5 8" id="KW-0521">NADP</keyword>
    <keyword evidence="6 8 12" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Shikimate_dh_N" evidence="10">
        <location>
            <begin position="10"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="domain" description="Shikimate_DH" evidence="9">
        <location>
            <begin position="124"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="domain" description="SDH_C" evidence="11">
        <location>
            <begin position="244"/>
            <end position="267"/>
        </location>
    </feature>
    <feature type="region of interest" description="Shikimate binding" evidence="8">
        <location>
            <begin position="18"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="8">
        <location>
            <position position="69"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="65"/>
        </location>
        <ligand>
            <name>shikimate</name>
            <dbReference type="ChEBI" id="CHEBI:36208"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="81"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="90"/>
        </location>
        <ligand>
            <name>shikimate</name>
            <dbReference type="ChEBI" id="CHEBI:36208"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="106"/>
        </location>
        <ligand>
            <name>shikimate</name>
            <dbReference type="ChEBI" id="CHEBI:36208"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="132"/>
            <end position="136"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="156"/>
            <end position="161"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="221"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="223"/>
        </location>
        <ligand>
            <name>shikimate</name>
            <dbReference type="ChEBI" id="CHEBI:36208"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="244"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="251"/>
        </location>
        <ligand>
            <name>shikimate</name>
            <dbReference type="ChEBI" id="CHEBI:36208"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001648"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004871"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00222"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF01488"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF08501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF18317"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ74163.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="282" mass="29720" checksum="1940D2F09E8BB27A" modified="2015-12-09" version="1">MSGETRKAAITGFPVDQSRSPLVHGYWLKKHGLDGEYGRVPVTPATADAFYKDFAASGLIGANVTVPHKEVAAAACAHLDDAAKAMGAANTLWLDETGALCGANTDGLGFLGNLDQLAPGWDSSNGTAVVLGAGGAARAIIWALLSRGFTAVHIVNRTFEKAKVLEDQFGSKTKAYAWDKLGTLLGEAGFLVNTTALGMAGKAPLEIDLDPLPVSALVTDIVYVPLETDLLKQAQKRGNKTVDGLGMLLHQAVPGFERWFGVRPEVDKELRDLVLADLGVTP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALL9</accession>
    <name>A0A0M7ALL9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">N-glycosyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04229</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75431.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673465.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000021.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04229"/>
    <dbReference type="EnsemblBacteria" id="CTQ75431">
        <property type="protein sequence ID" value="CTQ75431"/>
        <property type="gene ID" value="LAX5112_04229"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001173">
        <property type="entry name" value="Glyco_trans_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00535">
        <property type="entry name" value="Glycos_transf_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glyco_trans_2-like" evidence="1">
        <location>
            <begin position="261"/>
            <end position="437"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00535"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75431.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="548" mass="61661" checksum="121BB802AAD1D9E9" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALU3</accession>
    <name>A0A0M7ALU3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04220</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75412.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04220"/>
    <dbReference type="EnsemblBacteria" id="CTQ75412">
        <property type="protein sequence ID" value="CTQ75412"/>
        <property type="gene ID" value="LAX5112_04220"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.33.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035940">
        <property type="entry name" value="CAP_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043708">
        <property type="entry name" value="DUF5648"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18885">
        <property type="entry name" value="DUF5648"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ75412.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="342" mass="37014" checksum="85E9F247400CD767" modified="2015-12-09" version="1">MATNYYANTSEDTIDGDELTLYNLIMDYRGTLGLSTIPLSAGLTATAGRHVLDTVYNTGAYEGHSWSDAPYSSSDSSTYTNMWDAPTRIGTSYTSNGYEISTGYSGSFVTNTIMTAANALANWQSSEPHNDVITNQSPWLQDWLAIGIGMHKGIAHVWFGHATDPGGTPTIDTSVSDSGSETFVTLPVDTADADGSPFQIYRFYNTLTGSHFFTTSTEERNSVITNIPTMNYEGNSFDSNATEAGGGAAVHRFYNSDSGVHFYTASAAEAQSIQNSLPQFNYEGIAYYASETADAGGTALYRFFNSQSGSHFYTTSAEERDSIISTLGHYTYEGVAYYVDLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALZ7</accession>
    <name>A0A0M7ALZ7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative enzyme related to lactoylglutathione lyase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03976</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74793.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673271.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03976"/>
    <dbReference type="EnsemblBacteria" id="CTQ74793">
        <property type="protein sequence ID" value="CTQ74793"/>
        <property type="gene ID" value="LAX5112_03976"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.180.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029068">
        <property type="entry name" value="Glyas_Bleomycin-R_OHBP_Dase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004360">
        <property type="entry name" value="Glyas_Fos-R_dOase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037523">
        <property type="entry name" value="VOC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00903">
        <property type="entry name" value="Glyoxalase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54593">
        <property type="entry name" value="SSF54593"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51819">
        <property type="entry name" value="VOC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="VOC" evidence="1">
        <location>
            <begin position="3"/>
            <end position="128"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51819"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74793.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="129" mass="14308" checksum="04019589FA23F291" modified="2015-12-09" version="1">MKQFISAVSLLVPDYDEGLEFYVNVLGCQLIEDTELEPGKRWVLVAPPGSAETRLLLARADGPEQQAAIGNQAGGRVFLFLTTDNFDRDYAAMSEKGVQFLEAPRREPYGTVAVFQDPFGNKWDLIQPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AM10</accession>
    <name>A0A0M7AM10_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Acetophenone carboxylase delta subunit</fullName>
            <ecNumber evidence="2">6.4.1.8</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">apc4</name>
        <name evidence="2" type="ORF">LAX5112_04332</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="6.4.1.8" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000022">
        <property type="protein sequence ID" value="CTQ75697.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673550.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000022.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04332"/>
    <dbReference type="EnsemblBacteria" id="CTQ75697">
        <property type="protein sequence ID" value="CTQ75697"/>
        <property type="gene ID" value="LAX5112_04332"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016874">
        <property type="term" value="F:ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003692">
        <property type="entry name" value="Hydantoinase_B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045079">
        <property type="entry name" value="Oxoprolinase_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11365">
        <property type="entry name" value="PTHR11365"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02538">
        <property type="entry name" value="Hydantoinase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0436">Ligase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Hydantoinase_B" evidence="1">
        <location>
            <begin position="5"/>
            <end position="528"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02538"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75697.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="563" mass="59821" checksum="44A4EDC1E55942FE" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AM85</accession>
    <name>A0A0M7AM85_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 6">Mannonate dehydratase</fullName>
            <ecNumber evidence="5 6">4.2.1.8</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">D-mannonate hydro-lyase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6 7" type="primary">uxuA</name>
        <name evidence="7" type="ORF">LAX5112_04281</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2 6">Catalyzes the dehydration of D-mannonate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 6">
            <text>D-mannonate = 2-dehydro-3-deoxy-D-gluconate + H2O</text>
            <dbReference type="Rhea" id="RHEA:20097"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:17767"/>
            <dbReference type="ChEBI" id="CHEBI:57990"/>
            <dbReference type="EC" id="4.2.1.8"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>Fe(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29033"/>
        </cofactor>
        <cofactor evidence="6">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="3 6">Carbohydrate metabolism; pentose and glucuronate interconversion.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4 6">Belongs to the mannonate dehydratase family.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.8" evidence="5 6"/>
    <dbReference type="EMBL" id="CXWD01000022">
        <property type="protein sequence ID" value="CTQ75552.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673516.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000022.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04281"/>
    <dbReference type="EnsemblBacteria" id="CTQ75552">
        <property type="protein sequence ID" value="CTQ75552"/>
        <property type="gene ID" value="LAX5112_04281"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00246"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008927">
        <property type="term" value="F:mannonate dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006064">
        <property type="term" value="P:glucuronate catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00106">
        <property type="entry name" value="UxuA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004628">
        <property type="entry name" value="Man_deHydtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036237">
        <property type="entry name" value="Xyl_isomerase-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30387">
        <property type="entry name" value="PTHR30387"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03786">
        <property type="entry name" value="UxuA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF016049">
        <property type="entry name" value="Man_dehyd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51658">
        <property type="entry name" value="SSF51658"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00695">
        <property type="entry name" value="uxuA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0408">Iron</keyword>
    <keyword evidence="6 7" id="KW-0456">Lyase</keyword>
    <keyword evidence="6" id="KW-0464">Manganese</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001794"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00002713"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00007389"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00106"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ75552.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="390" mass="44083" checksum="4AECD84DEB5AFAC3" modified="2015-12-09" version="1">MIECWRWFGPDDPISLRDVRQTGATGIVTALHQIPNGTYWPEEEIAKRRRMIEAAGLTWEVCESIPIHEDIKTGAPGWERWAENWAETVRALARENIRTICYNFMPVLDWTRTDLDYELPDGATALRFEFVAYAAFDLFILKREGAEADYSQNDVSAAEAWLDQRTDEDKDRLVRTIIAGLPGSEESYTLDTFREHLAAYRAIDKESLFQNLANFLEIVVPVAEEEGVKLAIHPDDPPRSLFGLPRIVGTREDLIRIKNLNTSQANGFTVCSGSLGVHPDNDLPAIIEALDDRIHFAHLRTTKREADPRSFHEDAHLAGDVDMVAIVRALRTLERKRGKAIPMRPDHGHRMLSDLKETSTPGYPAIGRLRGLAELRGVMRTVDVYEASPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AN90</accession>
    <name>A0A0M7AN90_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04162</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75253.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673413.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75253">
        <property type="protein sequence ID" value="CTQ75253"/>
        <property type="gene ID" value="LAX5112_04162"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809554" evidence="1">
        <location>
            <begin position="23"/>
            <end position="120"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75253.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="120" mass="12801" checksum="71937D50CE9A031C" modified="2015-12-09" version="1">MKYFLSAAAGMGFSLAASFAFAQGTGSEGYFQVYNNTEGNIAVGFYTNGGDGWSDNWLGDALMPGQNAQAAFDADTGNCDQVFQIGWLGADDSEVLDEPIAIDICAASNVYLDDNEIYYD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANE2</accession>
    <name>A0A0M7ANE2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Translation initiation factor IF-1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2 5" type="primary">infA</name>
        <name evidence="5" type="ORF">LAX5112_04500</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Component of the 30S ribosomal translation pre-initiation complex which assembles on the 30S ribosome in the order IF-2 and IF-3, IF-1 and N-formylmethionyl-tRNA(fMet); mRNA recruitment can occur at any time during PIC assembly.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the IF-1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000025">
        <property type="protein sequence ID" value="CTQ76177.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_006939340.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000025.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04500"/>
    <dbReference type="EnsemblBacteria" id="CTQ76177">
        <property type="protein sequence ID" value="CTQ76177"/>
        <property type="gene ID" value="LAX5112_04500"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043022">
        <property type="term" value="F:ribosome binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003743">
        <property type="term" value="F:translation initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd04451">
        <property type="entry name" value="S1_IF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00075">
        <property type="entry name" value="IF_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006196">
        <property type="entry name" value="RNA-binding_domain_S1_IF1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004368">
        <property type="entry name" value="TIF_IF1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33370">
        <property type="entry name" value="PTHR33370"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01176">
        <property type="entry name" value="eIF-1a"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00008">
        <property type="entry name" value="infA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50832">
        <property type="entry name" value="S1_IF1_TYPE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="1 2 3" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="2 3" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="2" id="KW-0699">rRNA-binding</keyword>
    <feature type="domain" description="S1-like" evidence="4">
        <location>
            <begin position="1"/>
            <end position="72"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022540"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00075"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00181"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50832"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ76177.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="72" mass="8300" checksum="67D12D136C763273" modified="2015-12-09" version="1">MAKEEALEFPGVVTELLPNATFRVKLENDHEIIAHTAGRMRKNRIRVLAGDKVLVEMTPYDLTKGRITYRFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AP18</accession>
    <name>A0A0M7AP18_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04730</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000029">
        <property type="protein sequence ID" value="CTQ76865.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673902.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000029.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04730"/>
    <dbReference type="EnsemblBacteria" id="CTQ76865">
        <property type="protein sequence ID" value="CTQ76865"/>
        <property type="gene ID" value="LAX5112_04730"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="33"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="59"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="92"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="126"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="153"/>
            <end position="170"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76865.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="200" mass="21397" checksum="4F4E402A7231E0B9" modified="2015-12-09" version="1">MQTQQKRWLTDLMEGVPSIVFILLWRQSGDLEFAGWVGSALCLMILGALIGMKVRMHPILMGVNIHILLATPLIVGLFRLEFDGVGDVLAEYAYGGVLVTVFAVGFAQMLYSRSRFAALENVTDRVQLVFSAVLLAFCACGAVWALLTPGSRFVPVVVTIAALIIGRNFLQARLSDKSAGAGVLLTGSAAAPGTSQNVQV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APC0</accession>
    <name>A0A0M7APC0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Transcriptional regulatory protein UhpA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">uhpA_2</name>
        <name evidence="4" type="ORF">LAX5112_04309</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000022">
        <property type="protein sequence ID" value="CTQ75633.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673538.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000022.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75633">
        <property type="protein sequence ID" value="CTQ75633"/>
        <property type="gene ID" value="LAX5112_04309"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06170">
        <property type="entry name" value="LuxR_C_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00130">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000014">
        <property type="entry name" value="PAS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035965">
        <property type="entry name" value="PAS-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016032">
        <property type="entry name" value="Sig_transdc_resp-reg_C-effctor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000792">
        <property type="entry name" value="Tscrpt_reg_LuxR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00196">
        <property type="entry name" value="GerE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13426">
        <property type="entry name" value="PAS_9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00038">
        <property type="entry name" value="HTHLUXR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00421">
        <property type="entry name" value="HTH_LUXR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00091">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46894">
        <property type="entry name" value="SSF46894"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55785">
        <property type="entry name" value="SSF55785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00229">
        <property type="entry name" value="sensory_box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00622">
        <property type="entry name" value="HTH_LUXR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50043">
        <property type="entry name" value="HTH_LUXR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50112">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PAS" evidence="3">
        <location>
            <begin position="28"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="domain" description="HTH luxR-type" evidence="2">
        <location>
            <begin position="115"/>
            <end position="180"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50112"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ75633.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="185" mass="21073" checksum="FC4A76794C8A6E1D" modified="2015-12-09" version="1">MLELDQIAYDHAPMGLVLTEHRVIRTCNDTFAQMFGYEKKDLIGQSFRLLYGTDHEFHQVRDIGLEPLRQSLPYSDERLMLCADGNRIWCRFRARTLTPEDPLARTVLSFALIETKDSGPQLTKREREVVLLLSQGKTSKEIARDLGLSPRTVEDVRARLLKKFEVKNVAVLLARLAGLSSSPMS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQD2</accession>
    <name>A0A0M7AQD2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">V-type sodium pump subunit B</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ntpB</name>
        <name evidence="5" type="ORF">LAX5112_04432</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ATPase alpha/beta chains family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ76003.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04432"/>
    <dbReference type="EnsemblBacteria" id="CTQ76003">
        <property type="protein sequence ID" value="CTQ76003"/>
        <property type="gene ID" value="LAX5112_04432"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046034">
        <property type="term" value="P:ATP metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:1902600">
        <property type="term" value="P:proton transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004100">
        <property type="entry name" value="ATPase_F1/V1/A1_a/bsu_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000194">
        <property type="entry name" value="ATPase_F1/V1/A1_a/bsu_nucl-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022879">
        <property type="entry name" value="V-ATPase_su_B/beta"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43389">
        <property type="entry name" value="PTHR43389"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00006">
        <property type="entry name" value="ATP-synt_ab"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02874">
        <property type="entry name" value="ATP-synt_ab_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ATP-synt_ab_N" evidence="4">
        <location>
            <begin position="33"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="domain" description="ATP-synt_ab" evidence="3">
        <location>
            <begin position="140"/>
            <end position="330"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00006"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF02874"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ76003.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="460" mass="50307" checksum="C16D36D4D578ABAC" modified="2015-12-09" version="1">MLVSHTRIVDIVGDIIRIMVSSTKSEAEGRPCLGDLAIVETGDGTSSLAQVINIDQDMVSLQVNSGTKGLANNASVRFLGEPANVTYSDNILGRVFDGAGTPIDQGPDLSTDPTVPIGGPSANPMKRVLASRMIRTDVPMIDIFNCLVESQKIPIFSVSGEPYNAFLARIGIQADADIVVFGGLGLIFDDYAFFRKQFEDAGVFPRTVMFINQASDPVVERLQVPDMALAVAEKFAVEEGKRVLVLMTDMTAFADAMKEVSIAMERVPANRGYPGDLYSQLARRYEKACDFKGSGSVTILTVTTMPGNDVTHPVPDNTGYITEGQFYLHSGMLDPFGSLSRLKQHVIGKVTREDHNQIMNTMIRFYSGARDAEQKQSMAFELSDYDHQLLKFGALFRKRFMDIEVAIPLEEALDLCWQTLAECFLPEQLLMKQGLIDKYFPGEKAAAKDAAKNGADGEAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARS8</accession>
    <name>A0A0M7ARS8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Transcriptional regulatory protein OmpR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">ompR_2</name>
        <name evidence="6" type="ORF">LAX5112_04548</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000025">
        <property type="protein sequence ID" value="CTQ76284.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040453067.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000025.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04548"/>
    <dbReference type="EnsemblBacteria" id="CTQ76284">
        <property type="protein sequence ID" value="CTQ76284"/>
        <property type="gene ID" value="LAX5112_04548"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00383">
        <property type="entry name" value="trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001867">
        <property type="entry name" value="OmpR/PhoB-type_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016032">
        <property type="entry name" value="Sig_transdc_resp-reg_C-effctor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039420">
        <property type="entry name" value="WalR-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48111">
        <property type="entry name" value="PTHR48111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00486">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00862">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46894">
        <property type="entry name" value="SSF46894"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51755">
        <property type="entry name" value="OMPR_PHOB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="4">
        <location>
            <begin position="7"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="domain" description="OmpR/PhoB-type" evidence="5">
        <location>
            <begin position="135"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="OmpR/PhoB-type" evidence="3">
        <location>
            <begin position="135"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="2">
        <location>
            <position position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ76284.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="242" mass="27121" checksum="AC080409DD8A7CF8" modified="2015-12-09" version="1">MSDPSPHILVVDDHRDIRETLARYLVKNGLRATACENASAARKALKAASIDLVVLDIMMPGEDGLSLCRHLVETGSMPVILLTAMADDTDRVIGLEIGADDYVTKPFNPRELLARIRAVLRRTSLVPKDRDPIEQDRMHFDGWALNVTRRELTDPDGVAVALSSGEFQLLCAFLKRPKMVLNRDQLMDLTTGRTPAVFDRSIDNQVSRLRRKIEEDPKDPKLIKTVWGGGYMFTADVKEQVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASS9</accession>
    <name>A0A0M7ASS9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">LAX5112_04952</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000037">
        <property type="protein sequence ID" value="CTQ77561.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04952"/>
    <dbReference type="EnsemblBacteria" id="CTQ77561">
        <property type="protein sequence ID" value="CTQ77561"/>
        <property type="gene ID" value="LAX5112_04952"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020472">
        <property type="entry name" value="G-protein_beta_WD-40_rep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_repeat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019775">
        <property type="entry name" value="WD40_repeat_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036322">
        <property type="entry name" value="WD40_repeat_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00400">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00320">
        <property type="entry name" value="GPROTEINBRPT"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50978">
        <property type="entry name" value="SSF50978"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00678">
        <property type="entry name" value="WD_REPEATS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50082">
        <property type="entry name" value="WD_REPEATS_2"/>
        <property type="match status" value="5"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="1 4" id="KW-0853">WD repeat</keyword>
    <feature type="repeat" description="WD" evidence="4">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="4">
        <location>
            <begin position="37"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="4">
        <location>
            <begin position="79"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="4">
        <location>
            <begin position="121"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="repeat" description="WD" evidence="4">
        <location>
            <begin position="163"/>
            <end position="196"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00221"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ77561.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="804" mass="88568" checksum="EBFEB0D36FF08218" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AT03</accession>
    <name>A0A0M7AT03_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04893</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000034">
        <property type="protein sequence ID" value="CTQ77390.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674037.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000034.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77390">
        <property type="protein sequence ID" value="CTQ77390"/>
        <property type="gene ID" value="LAX5112_04893"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ77390.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="90" mass="10259" checksum="170BD07FB7F53B31" modified="2015-12-09" version="1">MNSQRTRASNFPSEIHEIVENTARMLSMPSSDLTECLTNETADEVAQFSNWLRRSNFSDALLAEIRNDFIRRPNKRLCAIQARFGVLLAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ATB4</accession>
    <name>A0A0M7ATB4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">tRNA(1-methyladenosine) methyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_05021</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000041">
        <property type="protein sequence ID" value="CTQ77702.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674143.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000041.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77702">
        <property type="protein sequence ID" value="CTQ77702"/>
        <property type="gene ID" value="LAX5112_05021"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003409">
        <property type="entry name" value="MORN"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02493">
        <property type="entry name" value="MORN"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SMART" id="SM00698">
        <property type="entry name" value="MORN"/>
        <property type="match status" value="4"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809717" evidence="1">
        <location>
            <begin position="23"/>
            <end position="276"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77702.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="276" mass="28343" checksum="14393DCD434308F0" modified="2015-12-09" version="1">MILRTLALVLAGSGFLSLPAAAEDYWVADPTTGCEIWSDTPTETVIATWSGSCADGKASGIGSLVWIEGGELVGTYRGAMLGGKLNGPGIMQIKAEDGSGFDQIETIFADGEPAGPGAVLAANGDRFQGTFTGGAKDGFGVLTDAEGNFYEGTFKDGQPHGFGYLKGVDGETYLGELAAGALEGEGLLLHANGEFYAGGFKAGLADGVGRYEDNTGGIYAGQFSAGKPNGIGNYLTVDGTAIQGRFVDQKPDGMVLVTAPDGTQTVETWQNGEKVQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AUY2</accession>
    <name>A0A0M7AUY2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04895</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000034">
        <property type="protein sequence ID" value="CTQ77394.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674039.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000034.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77394">
        <property type="protein sequence ID" value="CTQ77394"/>
        <property type="gene ID" value="LAX5112_04895"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ77394.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="282" mass="31835" checksum="105B8EB174192613" modified="2015-12-09" version="1">MTDYALTHFNRPFGNDPTQAAITEVPDQPKFDDVSSRLEELRAFETADILEMMEGIKTAIDMSKHAEAFKGKTRETYIACNLALNERMMQSFCPAPVFRPQPKRTNFPIGSEAALSNIARIIDMHFCAMMGHTPVTHELSQEIFGKPFDFDKAFEFSSTPGKVPAKLKILELADEETISLCRLGNMSLKTADDRIAQKAFFDRRRSYLVRLKNRSIQGKPNHEAQADLLAVGSMLKALDYEVTGKNLMLGCRLIGRTFGDRPSGYKNRYQKLMKTLRGKKPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZP35</accession>
    <name>A0A0M6ZP35_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Flagellar motor switch protein FliG</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="primary">fliG_1</name>
        <name evidence="14" type="ORF">LAX5112_00184</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Bacterial flagellum basal body</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Peripheral membrane protein</topology>
            <orientation evidence="2">Cytoplasmic side</orientation>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the FliG family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64117.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_050775945.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00184"/>
    <dbReference type="EnsemblBacteria" id="CTQ64117">
        <property type="protein sequence ID" value="CTQ64117"/>
        <property type="gene ID" value="LAX5112_00184"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009425">
        <property type="term" value="C:bacterial-type flagellum basal body"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003774">
        <property type="term" value="F:cytoskeletal motor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071973">
        <property type="term" value="P:bacterial-type flagellum-dependent cell motility"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006935">
        <property type="term" value="P:chemotaxis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000090">
        <property type="entry name" value="Flg_Motor_Flig"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023087">
        <property type="entry name" value="Flg_Motor_Flig_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011002">
        <property type="entry name" value="FliG_a-hlx"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032779">
        <property type="entry name" value="FliG_M"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028263">
        <property type="entry name" value="FliG_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30534">
        <property type="entry name" value="PTHR30534"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01706">
        <property type="entry name" value="FliG_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14841">
        <property type="entry name" value="FliG_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14842">
        <property type="entry name" value="FliG_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00954">
        <property type="entry name" value="FLGMOTORFLIG"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48029">
        <property type="entry name" value="SSF48029"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0975">Bacterial flagellum</keyword>
    <keyword evidence="5" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="14" id="KW-0966">Cell projection</keyword>
    <keyword evidence="6" id="KW-0145">Chemotaxis</keyword>
    <keyword evidence="14" id="KW-0969">Cilium</keyword>
    <keyword evidence="7" id="KW-0283">Flagellar rotation</keyword>
    <keyword evidence="14" id="KW-0282">Flagellum</keyword>
    <keyword evidence="8" id="KW-0472">Membrane</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FliG_N" evidence="13">
        <location>
            <begin position="25"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="domain" description="FliG_M" evidence="12">
        <location>
            <begin position="137"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="domain" description="FliG_C" evidence="11">
        <location>
            <begin position="235"/>
            <end position="342"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004287"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010299"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00021870"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022500"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022779"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023143"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF01706"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF14841"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF14842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="CTQ64117.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="353" mass="38972" checksum="136A4B6448B8CA76" modified="2015-12-09" version="1">MTSQAKAAPAPAAVPKPPAPPIRRLNGVQRVAALLLSLGRTSSQKLLRHFDQEEIRMITVSAAQLGTVASAELDKLAEEFIDQFSNGTTLFGSANEVEKMLEGVLPDEQLADIMSDVHGNSNRSIWDRLTTVSETVFANYLLKEHPQTAALILTKIKPSAAAKVLGHIRADMRNQLVRRMLSIKAVVPEIMRDVEKTMHEDFMLNLSGTLEADSHARMADILNKMERDHMEDALENLNEIRPKTAELLKGLLFTFDDISNLNARTRMAIFDQIPADRIVLALKGTSAEFREVVLSSMTSRARRIAEHELAAGEPAAQRDVLEARSSITNLALEMAGRGEIELNPKQDEGAYFA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPJ7</accession>
    <name>A0A0M6ZPJ7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00361</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64675.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670349.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00361"/>
    <dbReference type="EnsemblBacteria" id="CTQ64675">
        <property type="protein sequence ID" value="CTQ64675"/>
        <property type="gene ID" value="LAX5112_00361"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008407">
        <property type="entry name" value="Brnchd-chn_aa_trnsp_AzlD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05437">
        <property type="entry name" value="AzlD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="54"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="88"/>
            <end position="105"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64675.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="106" mass="10980" checksum="A35DCFBB766C85BF" modified="2015-12-09" version="1">MTEGMFSADAMFVLAVLGMTVATYILRAGGYWVMGRLPLTQRVRRGLDALPGAIIVSTILPIVLQGGLAVGLCLIVAAAAQIKLRKEYIAVFCAAAAAAGMRAAGI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQ58</accession>
    <name>A0A0M6ZQ58_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Acyl-CoA thioesterase YbgC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00232</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64250.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670227.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ64250">
        <property type="protein sequence ID" value="CTQ64250"/>
        <property type="gene ID" value="LAX5112_00232"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029069">
        <property type="entry name" value="HotDog_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006683">
        <property type="entry name" value="Thioestr_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03061">
        <property type="entry name" value="4HBT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54637">
        <property type="entry name" value="SSF54637"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="4HBT" evidence="1">
        <location>
            <begin position="28"/>
            <end position="105"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03061"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64250.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="144" mass="15921" checksum="0EDEC7CE77D5D709" modified="2015-12-09" version="1">MKTEAFARISDFPMTASDKLRYADTDRQGHVNNAVFATFLETGRTEVIYGEALADTGASFVIARLELDFLAEVNWPGEVQIGTVVQDVGRSSFKLHQKIFQDGKAVAQAVTIIVQMNNESRRSHLLTDRAKNRLNTLTSPASTC</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQ72</accession>
    <name>A0A0M6ZQ72_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">L-threonine dehydratase catabolic TdcB</fullName>
            <ecNumber evidence="4">4.3.1.19</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">tdcB_1</name>
        <name evidence="4" type="ORF">LAX5112_00446</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <dbReference type="EC" id="4.3.1.19" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64919.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670406.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00446"/>
    <dbReference type="EnsemblBacteria" id="CTQ64919">
        <property type="protein sequence ID" value="CTQ64919"/>
        <property type="gene ID" value="LAX5112_00446"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004794">
        <property type="term" value="F:L-threonine ammonia-lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006520">
        <property type="term" value="P:cellular amino acid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1100">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014333">
        <property type="entry name" value="Ectoine_EutB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001926">
        <property type="entry name" value="PLP-dep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000634">
        <property type="entry name" value="Ser/Thr_deHydtase_PyrdxlP-BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036052">
        <property type="entry name" value="Trypto_synt_PLP_dependent"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00291">
        <property type="entry name" value="PALP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53686">
        <property type="entry name" value="SSF53686"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02991">
        <property type="entry name" value="ectoine_eutB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00165">
        <property type="entry name" value="DEHYDRATASE_SER_THR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0456">Lyase</keyword>
    <keyword evidence="2" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PALP" evidence="3">
        <location>
            <begin position="20"/>
            <end position="309"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00291"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ64919.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="334" mass="35005" checksum="B8DF0734A0AF6011" modified="2015-12-09" version="1">MSVNHRINQFDFLAAADRIKPHVRRTPVVPSDSLSEKAGVPVYLKLEQLQTTGSFKLRGATNAISKLTADQRQKGVVCVSTGNHGRALAYAAKKAGISCTICMSRLVPQNKVDAIAKLGADIRITGASQDEAQLEADRLVLEEGLVLLPPFDHPDIISGQGTLGLEVLEEIPEVQTVLVPLSGGGLIAGIAAALKAARPSVKVVGLSMERGAAMAASLTAGRPVQVIEEPSLADSLGGGIGLDNQFTFETTRELVDDIVLLTEAEIAAGIRHAYWQERQVVEGSGAVGVAGLLAGNINPIGPVAVLLTGCNIDMNLHHRVIAGEDVDLANSEEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZR82</accession>
    <name>A0A0M6ZR82_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 5">Kynureninase</fullName>
            <ecNumber evidence="4 5">3.7.1.3</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">L-kynurenine hydrolase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="4 7" type="primary">kynU</name>
        <name evidence="7" type="ORF">LAX5112_00423</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4 5">Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3-hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3-hydroxyanthranilic acid (3-OHAA), respectively.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>3-hydroxy-L-kynurenine + H2O = 3-hydroxyanthranilate + H(+) + L-alanine</text>
            <dbReference type="Rhea" id="RHEA:25143"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:36559"/>
            <dbReference type="ChEBI" id="CHEBI:57972"/>
            <dbReference type="ChEBI" id="CHEBI:58125"/>
            <dbReference type="EC" id="3.7.1.3"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4 5">
            <text>H2O + L-kynurenine = anthranilate + H(+) + L-alanine</text>
            <dbReference type="Rhea" id="RHEA:16813"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16567"/>
            <dbReference type="ChEBI" id="CHEBI:57959"/>
            <dbReference type="ChEBI" id="CHEBI:57972"/>
            <dbReference type="EC" id="3.7.1.3"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="4 5">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="4 5">Amino-acid degradation; L-kynurenine degradation; L-alanine and anthranilate from L-kynurenine: step 1/1.</text>
    </comment>
    <comment type="pathway">
        <text evidence="4 5">Cofactor biosynthesis; NAD(+) biosynthesis; quinolinate from L-kynurenine: step 2/3.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4 5">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4 5">Belongs to the kynureninase family.</text>
    </comment>
    <dbReference type="EC" id="3.7.1.3" evidence="4 5"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64847.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670389.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00423"/>
    <dbReference type="EnsemblBacteria" id="CTQ64847">
        <property type="protein sequence ID" value="CTQ64847"/>
        <property type="gene ID" value="LAX5112_00423"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00253">
        <property type="reaction ID" value="UER00329"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00334">
        <property type="reaction ID" value="UER00455"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061981">
        <property type="term" value="F:3-hydroxykynureninase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030429">
        <property type="term" value="F:kynureninase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034354">
        <property type="term" value="P:'de novo' NAD biosynthetic process from tryptophan"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043420">
        <property type="term" value="P:anthranilate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0097053">
        <property type="term" value="P:L-kynurenine catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019805">
        <property type="term" value="P:quinolinate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006569">
        <property type="term" value="P:tryptophan catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01970">
        <property type="entry name" value="Kynureninase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000192">
        <property type="entry name" value="Aminotrans_V_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010111">
        <property type="entry name" value="Kynureninase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14084">
        <property type="entry name" value="PTHR14084"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00266">
        <property type="entry name" value="Aminotran_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF038800">
        <property type="entry name" value="KYNU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01814">
        <property type="entry name" value="kynureninase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 4 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1 4 5" id="KW-0662">Pyridine nucleotide biosynthesis</keyword>
    <keyword evidence="3 4 5" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aminotran_5" evidence="6">
        <location>
            <begin position="76"/>
            <end position="343"/>
        </location>
    </feature>
    <feature type="region of interest" description="Pyridoxal phosphate binding" evidence="4">
        <location>
            <begin position="122"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="94"/>
        </location>
        <ligand>
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="95"/>
        </location>
        <ligand>
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="164"/>
        </location>
        <ligand>
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="193"/>
        </location>
        <ligand>
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="196"/>
        </location>
        <ligand>
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="218"/>
        </location>
        <ligand>
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="248"/>
        </location>
        <ligand>
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="274"/>
        </location>
        <ligand>
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </ligand>
    </feature>
    <feature type="modified residue" description="N6-(pyridoxal phosphate)lysine" evidence="4">
        <location>
            <position position="219"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022642"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRNR" id="PIRNR038800"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00266"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ64847.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="406" mass="44326" checksum="E2CF1EDE5EF69A64" modified="2015-12-09" version="1">MQFRHPSDKDDVLRTKKDAFKIPEGVIYLDGNSLGVLPKNVPTRLAEVVEQEWGTSLIKSWNEHSWFDLPLRVGNRIGRLIGAPEGSVVACDSTSVNVFKVLAAALSLLPNRKVILSDNGNFPTDLYVASGLAELLDKGHELKVVAPEEVEAAITEEVAVVMLTQVDYRTGRLHDMTALTEKAHQAGALAIWDLAHSAGAIPVDLKGAKADFAIGCGYKYLNGGPGAPAFLYVAEVHQDKVTSPVTGWMGHEAPFAFDLDYRAVHGVTRMTVGTPAILSLSSLYAALDVFEDVDMADIRKKSISLSELFIKEVEEKCPQLTLASPRDPETRGSQVSFRFEEGYAAMQALIARGVIGDFRAPDVMRFGFTPLYLSHQDVVDAVAILADILETGSWDRPEYKSRAKVT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRH6</accession>
    <name>A0A0M6ZRH6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Lectin-like protein BA14k</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">LAX5112_00402</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Has immunoglobulin-binding and hemagglutination properties, and can bind to mannose. Essential for virulence. May be involved in LPS biosynthesis or polysaccharide transport.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the BA14k family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64786.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451488.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00402"/>
    <dbReference type="EnsemblBacteria" id="CTQ64786">
        <property type="protein sequence ID" value="CTQ64786"/>
        <property type="gene ID" value="LAX5112_00402"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030246">
        <property type="term" value="F:carbohydrate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012413">
        <property type="entry name" value="BA14K"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07886">
        <property type="entry name" value="BA14K"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0430">Lectin</keyword>
    <keyword evidence="8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0732">Signal</keyword>
    <keyword evidence="8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0843">Virulence</keyword>
    <feature type="signal peptide" evidence="9">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809032" description="Lectin-like protein BA14k" evidence="9">
        <location>
            <begin position="30"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="32"/>
            <end position="53"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004162"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010270"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00020552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022734"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023026"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00025321"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ64786.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="118" mass="12706" checksum="5CFA7F29411BE120" modified="2015-12-09" version="1">MFKTIVTTSAAVTIAAGAMIFAGSNTAQAGNGWGVAAGVAGGFAAGALVGSALSQPRYAGPPTYYYAPRRVYRPAPVVTYRPAPWTNAWYNYCTSKYRSFNPRTGYYLAYSGNYRFCR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRJ9</accession>
    <name>A0A0M6ZRJ9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Exodeoxyribonuclease III</fullName>
            <ecNumber evidence="4">3.1.11.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">xthA_1</name>
        <name evidence="4" type="ORF">LAX5112_00162</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the DNA repair enzymes AP/ExoA family.</text>
    </comment>
    <dbReference type="EC" id="3.1.11.2" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64053.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670178.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00162"/>
    <dbReference type="EnsemblBacteria" id="CTQ64053">
        <property type="protein sequence ID" value="CTQ64053"/>
        <property type="gene ID" value="LAX5112_00162"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004519">
        <property type="term" value="F:endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008853">
        <property type="term" value="F:exodeoxyribonuclease III activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd09086">
        <property type="entry name" value="ExoIII-like_AP-endo"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004808">
        <property type="entry name" value="AP_endonuc_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020848">
        <property type="entry name" value="AP_endonuclease_F1_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036691">
        <property type="entry name" value="Endo/exonu/phosph_ase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005135">
        <property type="entry name" value="Endo/exonuclease/phosphatase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037493">
        <property type="entry name" value="ExoIII-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43250">
        <property type="entry name" value="PTHR43250"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03372">
        <property type="entry name" value="Exo_endo_phos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56219">
        <property type="entry name" value="SSF56219"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00633">
        <property type="entry name" value="xth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00728">
        <property type="entry name" value="AP_NUCLEASE_F1_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51435">
        <property type="entry name" value="AP_NUCLEASE_F1_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Endo/exonuclease/phosphatase" evidence="3">
        <location>
            <begin position="4"/>
            <end position="251"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007092"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF03372"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ64053.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="260" mass="29500" checksum="FC0C929D5C0A8C89" modified="2015-12-09" version="1">MKIATWNINGVKARLETVQEWLKEASPDVACFQEIKSVDENFPRQPFEDLGYHVETHGQKGFNGVAILSKTPLEDVERRLPGNDDDEQARYIEATVTHGDGVVRFGCLYLPNGNPLGTEKFPYKLGWMDRLLVHAEKRLAEEVPFILLGDYNVIPDPVDAKNPENWTDDALFQPESRQKFRALTHLGMTEAIRACTEAPETFTFWDYQAGAWQKNNGIRIDHILMSPQANDKMLGCGIDKHVRGWEKPSDHVPVWVTLAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSD6</accession>
    <name>A0A0M6ZSD6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Putative conjugal transfer proteinc/MT3759</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_00538</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the GSP E family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65182.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670480.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00538"/>
    <dbReference type="EnsemblBacteria" id="CTQ65182">
        <property type="protein sequence ID" value="CTQ65182"/>
        <property type="gene ID" value="LAX5112_00538"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001482">
        <property type="entry name" value="T2SS/T4SS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00437">
        <property type="entry name" value="T2SSE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="T2SP_E" evidence="3">
        <location>
            <begin position="147"/>
            <end position="422"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="2">
        <location>
            <begin position="27"/>
            <end position="53"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006611"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ65182.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="505" mass="55009" checksum="0145B6BCAADC51E0" modified="2015-12-09" version="1">MFGRRGSSSSGAPEIRPGNVPEMPEAPATAPAAPMPEAPVQQAPTPSPAPRAPATPTVAVSVPAEPAAASPSRKKTGEYYETKAQIFNALVEAIDLSQLARLDAEDARDEIRDVVNDIIALKNVVMSISEQEDLLEDICNDVLGYGPLEPLLARDDIADIMVNGAHTVYIETQGKVEPTSIAFRDNAQLMNICQRIVSQVGRRVDDASPICDARLPDGSRVNVIAPPLSLDGPALTIRKFKRDKLTLDQLVKFNSITPEGATILQVIGRSRCNVLISGGTGSGKTTLLNCLTAYIENTERIITCEDSAELQLQQPHVVRLETRPPNLEGEGEITMRDLVKNCLRMRPERIIVGEVRGPEAFDLLQAMNTGHDGSMGTLHANSPREALSRLESMITMGGFSLPSRTLREMIVASIDVVVQAARLRDGSRRITHVTEVMGMEGDIITTQDIFLYDIVGEDPNGMIIGRHRSTGIGRPKFWDRARYFGEESRLAEALDASEMPEYIAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZT50</accession>
    <name>A0A0M6ZT50_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Carbon monoxide dehydrogenase small chain</fullName>
            <ecNumber evidence="3">1.2.99.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">coxS</name>
        <name evidence="3" type="ORF">LAX5112_00818</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.2.99.2" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65959.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670726.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00818"/>
    <dbReference type="EnsemblBacteria" id="CTQ65959">
        <property type="protein sequence ID" value="CTQ65959"/>
        <property type="gene ID" value="LAX5112_00818"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00207">
        <property type="entry name" value="fer2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002888">
        <property type="entry name" value="2Fe-2S-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036884">
        <property type="entry name" value="2Fe-2S-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036010">
        <property type="entry name" value="2Fe-2S_ferredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001041">
        <property type="entry name" value="2Fe-2S_ferredoxin-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012675">
        <property type="entry name" value="Beta-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00111">
        <property type="entry name" value="Fer2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01799">
        <property type="entry name" value="Fer2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47741">
        <property type="entry name" value="SSF47741"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54292">
        <property type="entry name" value="SSF54292"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="2Fe-2S ferredoxin-type" evidence="1">
        <location>
            <begin position="13"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="domain" description="Fer2_2" evidence="2">
        <location>
            <begin position="79"/>
            <end position="153"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01799"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ65959.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="169" mass="18408" checksum="57AFF49F88AC8CFC" modified="2015-12-09" version="1">MSDIEQIPVTMAVNGKKVQRFVEPRTLLIHFLREDLDITGPHIGCETSHCGACTIEMNGMSVKACTVFAVQANNAELTTVEAMANADGTLSALQEGFRQMHGLQCGYCTPGMIMRAHVLLKENPNPTEDEIRMGISGNLCRCTGYQNIVKAIQYAAAKLNGTEFQEAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTA6</accession>
    <name>A0A0M6ZTA6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Putative ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">LAX5112_00814</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65948.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00814"/>
    <dbReference type="EnsemblBacteria" id="CTQ65948">
        <property type="protein sequence ID" value="CTQ65948"/>
        <property type="gene ID" value="LAX5112_00814"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="21"/>
            <end position="256"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="54"/>
            <end position="61"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ65948.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="299" mass="33042" checksum="80C62BE86A9FAF85" modified="2015-12-09" version="1">MLKVIEEPELASTTMVSDIGISAEDVTVTYRNGHTALWNASFEIPRGTVTALVGVNGAGKSTLFKAIMGFVPAAKGTIQLLGMSVKEALRKNLVAYVPQSEEVDWSFPVLVEDVVMMGRYGHMGFLRRPKQSDHDAVAEALSRVNMQDYRKRQIGELSGGQRKRVFLARALAQDGQVILLDEPFTGVDVKTEEQIIELLGELRAEGRVMLVSTHNLGSVPEFCDRTVLVKGTVLAFGPTETTFTRENLEQAFGGVLRHFTISDQTLHTDGDDRKVTILTDDERPFVQYGDETQTAEKRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZU19</accession>
    <name>A0A0M6ZU19_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Sulfate starvation-induced protein 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">tauA</name>
        <name evidence="3" type="ORF">LAX5112_00729</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65711.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008194481.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00729"/>
    <dbReference type="EnsemblBacteria" id="CTQ65711">
        <property type="protein sequence ID" value="CTQ65711"/>
        <property type="gene ID" value="LAX5112_00729"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010068">
        <property type="entry name" value="Peri-bd_TauA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015168">
        <property type="entry name" value="SsuA/THI5"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30024:SF38">
        <property type="entry name" value="PTHR30024:SF38"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09084">
        <property type="entry name" value="NMT1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809278" evidence="1">
        <location>
            <begin position="26"/>
            <end position="332"/>
        </location>
    </feature>
    <feature type="domain" description="NMT1" evidence="2">
        <location>
            <begin position="39"/>
            <end position="240"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF09084"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ65711.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="332" mass="34617" checksum="20958FA12EE6BAA0" modified="2015-12-09" version="1">MALKSKLGGAVGLLALMGAFQPAAAEELTVAYFLEWPMPFQYAKAKGLYDEALGMKVNWVSFDTGTAMSAAMASGDVQIAVSQGVPPFVVATSAGQDLQIVDVAVSYSENDNCVVAEKLEIDKDSASELAGKKVGVPIGTAAHYGFLKQMEHFGVDIGTMDIVDMAPADGAAAFAQGSLEMVCGWGGALRRMKEHGNVLLTGAEKEELGILVFDVTSAPADFIAEESDTLSKFLKVTADANAMWNSGDNTAEMLPVIAKDAGMSEDDTSSTMATFVFPSVEDQLSAKWLGGGSQEFMKGVAEVFVNAGSIPSARDSYDGAVDTSALGAAANM</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUA3</accession>
    <name>A0A0M6ZUA3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Lipopolysaccharide export system ATP-binding protein LptB</fullName>
            <ecNumber evidence="5">3.6.3.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">lptB_2</name>
        <name evidence="5" type="ORF">LAX5112_00785</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.6.3.-" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65867.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670705.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00785"/>
    <dbReference type="EnsemblBacteria" id="CTQ65867">
        <property type="protein sequence ID" value="CTQ65867"/>
        <property type="gene ID" value="LAX5112_00785"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032823">
        <property type="entry name" value="BCA_ABC_TP_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12399">
        <property type="entry name" value="BCA_ABC_TP_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="4"/>
            <end position="251"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="36"/>
            <end position="43"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ65867.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="260" mass="27794" checksum="7A4E2F0E3C2F3BDB" modified="2015-12-09" version="1">MSILEISGLGISFGGLRAVNDVGFTVKPGEIVSVIGPNGAGKTTLFNMISGVYLPDAGHVKLNGADVTSKAPHILAKRGLTRTFQNLQIFQEMTVLENVVAGFHLTENPSVWADLLSLPAARRRSAEVREQALRLLEKVHLSKAAEEEAGNLSYGALKRLEIARALAVGPQVLLLDEPAAGCNAVETEEIDELIAELAKSGIAILLVEHDMKMVMRISNHIVVLDHGEKIAEGTPEDVSRNPDVIAAYLGTEEEPAHADG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUK2</accession>
    <name>A0A0M6ZUK2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Ferredoxin--NADP(+) reductase</fullName>
            <ecNumber evidence="4">1.18.1.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">fpr</name>
        <name evidence="7" type="ORF">LAX5112_00974</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>H(+) + NADP(+) + 2 reduced [2Fe-2S]-[ferredoxin] = NADPH + 2 oxidized [2Fe-2S]-[ferredoxin]</text>
            <dbReference type="Rhea" id="RHEA:20125"/>
            <dbReference type="Rhea" id="RHEA-COMP:10000"/>
            <dbReference type="Rhea" id="RHEA-COMP:10001"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:33737"/>
            <dbReference type="ChEBI" id="CHEBI:33738"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="EC" id="1.18.1.2"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the ferredoxin--NADP reductase type 1 family.</text>
    </comment>
    <dbReference type="EC" id="1.18.1.2" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66455.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008194694.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00974"/>
    <dbReference type="EnsemblBacteria" id="CTQ66455">
        <property type="protein sequence ID" value="CTQ66455"/>
        <property type="gene ID" value="LAX5112_00974"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004324">
        <property type="term" value="F:ferredoxin-NADP+ reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06195">
        <property type="entry name" value="FNR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008333">
        <property type="entry name" value="Cbr1-like_FAD-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017927">
        <property type="entry name" value="FAD-bd_FR_type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033892">
        <property type="entry name" value="FNR_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039261">
        <property type="entry name" value="FNR_nucleotide-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001433">
        <property type="entry name" value="OxRdtase_FAD/NAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017938">
        <property type="entry name" value="Riboflavin_synthase-like_b-brl"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00970">
        <property type="entry name" value="FAD_binding_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00175">
        <property type="entry name" value="NAD_binding_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52343">
        <property type="entry name" value="SSF52343"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63380">
        <property type="entry name" value="SSF63380"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51384">
        <property type="entry name" value="FAD_FR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FAD-binding FR-type" evidence="6">
        <location>
            <begin position="13"/>
            <end position="116"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008312"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00013223"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51384"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ66455.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="270" mass="30066" checksum="A89BC9A5652983CF" modified="2015-12-09" version="1">MNVLAKPADLADAAPAGVFVEEVKTVQHYTDRLFRFRMTRPSSFRFRSGEFVMIGLMIDGKPLYRAYSIASPAWDEELEFFSIKVPDGPLTSHLQKIQPGDAVLMKKKPTGTLVNDALVPGKRVYMFSTGTGIAPFASLIRDPDTYEKFDQVILTHTCREVAELKYGEDLVQETLNDPLIGEFAKDKLVHYTSVTREDFPRQGRITDLIQSGKLFEDLGVPPLDPAIDRGMICGSMDMLRDTKALLEEAGLTEGANNKPAEFVVERAFVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUP2</accession>
    <name>A0A0M6ZUP2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">OsmC-like protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00807</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65931.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670721.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ65931">
        <property type="protein sequence ID" value="CTQ65931"/>
        <property type="gene ID" value="LAX5112_00807"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015946">
        <property type="entry name" value="KH_dom-like_a/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003718">
        <property type="entry name" value="OsmC/Ohr_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036102">
        <property type="entry name" value="OsmC/Ohrsf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02566">
        <property type="entry name" value="OsmC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82784">
        <property type="entry name" value="SSF82784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ65931.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="152" mass="16297" checksum="6F699142CF945DC7" modified="2015-12-09" version="1">MPSLREKTVVKLRAKGQGISHSRADVSIRDLTFQIDEPEARGGTNLGPAPTEAALAALAGCTNVIGHKCASKLGADIGHLTIEITCEFDRRGVTLEEEIDVPFVALRQVVTSDGSVSQEELDRVGSEVAKYCPLSKLFEQSGTSMETIWAKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUQ3</accession>
    <name>A0A0M6ZUQ3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Manganese transport system membrane protein MntB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">mntB_2</name>
        <name evidence="8" type="ORF">LAX5112_00813</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cell membrane</location>
            <topology evidence="6">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the ABC-3 integral membrane protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65946.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00813"/>
    <dbReference type="EnsemblBacteria" id="CTQ65946">
        <property type="protein sequence ID" value="CTQ65946"/>
        <property type="gene ID" value="LAX5112_00813"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3470.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037294">
        <property type="entry name" value="ABC_BtuC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001626">
        <property type="entry name" value="ABC_TroCD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30477">
        <property type="entry name" value="PTHR30477"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00950">
        <property type="entry name" value="ABC-3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81345">
        <property type="entry name" value="SSF81345"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="12"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="57"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="94"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="135"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="174"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="197"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="221"/>
            <end position="243"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="249"/>
            <end position="267"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ65946.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="300" mass="31554" checksum="566B437034D5AB0C" modified="2015-12-09" version="1">MIATLLEPFNYAYMTNAMWVSALVGGVCAFLSAYLMLKGWSLIGDALSHSVVPGVAGAYILGLPFALGAFIAGGLAAGAMLFLSERSGLKVDVIIGLIFTSFFGLGLFIVSVNPMSVSIQTITMGNILAITPEDTLQLAIIGFVSLGVLLLKWKDLMVTFFDENHARTIGLRPGLLKAVFFILLSASVVAAMQTVGAFLVIAMVVTPGATAYLLCDRFPRLIALSVVIGSVTSFSGAYISYFLDGATGGIIVTLQTLIFLVAFVFAPKHGLLAARRKASEALRNGPPEAVLPGPRGGELQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVY9</accession>
    <name>A0A0M6ZVY9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Type VI secretion protein, family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01144</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66925.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008191100.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01144"/>
    <dbReference type="EnsemblBacteria" id="CTQ66925">
        <property type="protein sequence ID" value="CTQ66925"/>
        <property type="gene ID" value="LAX5112_01144"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008312">
        <property type="entry name" value="T6SS_TssB1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35850">
        <property type="entry name" value="PTHR35850"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05591">
        <property type="entry name" value="T6SS_VipA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF028301">
        <property type="entry name" value="UCP028301"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03358">
        <property type="entry name" value="VI_chp_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ66925.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="172" mass="19046" checksum="6C2990BFDB23CFF2" modified="2015-12-09" version="1">MSKESSVAPKERVNIKYKPATGDAKEEVELPLKLVMLGDYTMRPDDTPVEDRSLININKDNFNEVMKSHELKLDMATDNKLVEQQEGEEPEKLSVSLKIESLADFSPESVVRQTPELNKLLELREALVALKGPLGNVPAFRKAIQNVLGDEAAREKLLAELTNSTGKSGDGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZX37</accession>
    <name>A0A0M6ZX37_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01115</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66847.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ66847">
        <property type="protein sequence ID" value="CTQ66847"/>
        <property type="gene ID" value="LAX5112_01115"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="66"/>
            <end position="111"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66847.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="141" mass="16201" checksum="E31E21CCC916E40E" modified="2015-12-09" version="1">MSSPDAMQPAIASLAKTCEAIANGRYDDVDELFDIITDKHVPESIRALAETFSSMVVQVEAREFHSGQLIEDLTETRRKLELAEAQLRKENQELKVRLDKFEVAYDEKEAKMEVEKVADTDYFRTLQARAKSMRSKYKKQP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXP7</accession>
    <name>A0A0M6ZXP7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Carnitine catabolism transcriptional activator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">cdhR_3</name>
        <name evidence="3" type="ORF">LAX5112_01420</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67535.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008191427.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67535">
        <property type="protein sequence ID" value="CTQ67535"/>
        <property type="gene ID" value="LAX5112_01420"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002818">
        <property type="entry name" value="DJ-1/PfpI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018062">
        <property type="entry name" value="HTH_AraC-typ_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020449">
        <property type="entry name" value="Tscrpt_reg_HTH_AraC-type"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01965">
        <property type="entry name" value="DJ-1_PfpI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00032">
        <property type="entry name" value="HTHARAC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="SSF52317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00041">
        <property type="entry name" value="HTH_ARAC_FAMILY_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="2">
        <location>
            <begin position="216"/>
            <end position="314"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ67535.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="325" mass="36143" checksum="E7515604708B1EFF" modified="2015-12-09" version="1">MPRTRDVTFLLLDDFSHIAFACAVEPLRIANLLQGEEIYRWRLASVDGERVVCSNKTVTLVDQGLKDLPPRSSLFLISGQNVGDRATSDVLAFLRRERARGTRIGAICSGAHVLASAGFLNNRRAAIHWSFHDSFQENFPEVELCRNVFVADETFVTASGGTAATDLMLHLIGETHGEDLAAAIADMMVYSGVRPADAAQQISLQARHGIRNPHIAEAIRLLNESAPYYLPTSEIARTIGISTRQLERLFQKHLKMSPKQFAINQKLTRARNLLLQTEQSISEIALACGYESPSHFIRTYQNRFGVTPHNQRVFAATPLTVYQIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXT4</accession>
    <name>A0A0M6ZXT4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Murein L,D-transpeptidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_00944</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Cell wall biogenesis; peptidoglycan biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the YkuD family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66373.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670867.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00944"/>
    <dbReference type="EnsemblBacteria" id="CTQ66373">
        <property type="protein sequence ID" value="CTQ66373"/>
        <property type="gene ID" value="LAX5112_00944"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00219"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071972">
        <property type="term" value="F:peptidoglycan L,D-transpeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd16913">
        <property type="entry name" value="YkuD_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.101.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.440.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005490">
        <property type="entry name" value="LD_TPept_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045380">
        <property type="entry name" value="LD_TPept_scaffold_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002477">
        <property type="entry name" value="Peptidoglycan-bd-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036365">
        <property type="entry name" value="PGBD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036366">
        <property type="entry name" value="PGBDSf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038063">
        <property type="entry name" value="Transpep_catalytic_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01471">
        <property type="entry name" value="PG_binding_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20142">
        <property type="entry name" value="Scaffold"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03734">
        <property type="entry name" value="YkuD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141523">
        <property type="entry name" value="SSF141523"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47090">
        <property type="entry name" value="SSF47090"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Scaffold" evidence="6">
        <location>
            <begin position="82"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="domain" description="PG_binding_1" evidence="4">
        <location>
            <begin position="245"/>
            <end position="300"/>
        </location>
    </feature>
    <feature type="domain" description="YkuD" evidence="5">
        <location>
            <begin position="329"/>
            <end position="492"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004752"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF01471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF03734"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF20142"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ66373.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="562" mass="62687" checksum="D1479BD9E0C4C90C" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZY14</accession>
    <name>A0A0M6ZY14_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Flavin reductase like domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01439</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67579.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008197095.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01439"/>
    <dbReference type="EnsemblBacteria" id="CTQ67579">
        <property type="protein sequence ID" value="CTQ67579"/>
        <property type="gene ID" value="LAX5112_01439"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010181">
        <property type="term" value="F:FMN binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016646">
        <property type="term" value="F:oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002563">
        <property type="entry name" value="Flavin_Rdtase-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012349">
        <property type="entry name" value="Split_barrel_FMN-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01613">
        <property type="entry name" value="Flavin_Reduct"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00903">
        <property type="entry name" value="Flavin_Reduct"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Flavin_Reduct" evidence="1">
        <location>
            <begin position="19"/>
            <end position="168"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00903"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67579.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="200" mass="22051" checksum="0F2BF73157E135FA" modified="2015-12-09" version="1">MFYETEKNDHGLPHNPFKAIIAPRPIGWISSVDTDGKTNLAPYSFFNCVCDTPPIVMFSSSNYKDSAANIDATGEFVCNMASYDLKDEMNLSSAAVPHEKSEFELTGLEMAQSNLVSVPRVAKAATALECKHLQTIRMKGLDGTDTNSWVIFGQVVGVHISDDVIVNGMVDVTRYKPLSRLGYMDYAVVTEVFQMGRPKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYA8</accession>
    <name>A0A0M6ZYA8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Phage-associated protein, family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01236</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67152.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671074.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01236"/>
    <dbReference type="EnsemblBacteria" id="CTQ67152">
        <property type="protein sequence ID" value="CTQ67152"/>
        <property type="gene ID" value="LAX5112_01236"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024459">
        <property type="entry name" value="DUF1073"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006445">
        <property type="entry name" value="Phage-assoc_HI1409"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06381">
        <property type="entry name" value="DUF1073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01555">
        <property type="entry name" value="phge_rel_HI1409"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="424"/>
            <end position="451"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67152.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="606" mass="67286" checksum="FE508503F063A074" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZ12</accession>
    <name>A0A0M6ZZ12_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Phosphate-import ATP-binding protein PhnC</fullName>
            <ecNumber evidence="6">3.6.3.27</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">phnC</name>
        <name evidence="6" type="ORF">LAX5112_01084</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.27" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66763.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670953.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01084"/>
    <dbReference type="EnsemblBacteria" id="CTQ66763">
        <property type="protein sequence ID" value="CTQ66763"/>
        <property type="gene ID" value="LAX5112_01084"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015416">
        <property type="term" value="F:ABC-type phosphonate transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd03256">
        <property type="entry name" value="ABC_PhnC_transporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012693">
        <property type="entry name" value="ABC_transpr_PhnC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02315">
        <property type="entry name" value="ABC_phnC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="2"/>
            <end position="245"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="34"/>
            <end position="41"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ66763.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="277" mass="30022" checksum="62667B7FFDC95708" modified="2015-12-09" version="1">MIQFQDVTKTFGSRTAVNKVSFNIDKPQMVGIIGRSGAGKSTLLRMINRLTPATSGQILFNDRDILSLKGGMMRRWQRDCAMVFQQFNLVPRLDVVTNVMLGRLNGHGTLKSLFNIFGQDDVNSALAALDRLGIAQEATKRAEELSGGQQQRVAIARALMQDPHMILADEPIASLDPMNAKIVMDALREIHVRDNKIVICNLHTLDTARTYCDRVIGMRDGFIVFDGAPDALTTNVAREIYGADESFNEAATSTAIDAGQSGTQESAGAVAPAAAAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZ64</accession>
    <name>A0A0M6ZZ64_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Phosphoribosylformylglycinamidine synthase subunit PurS</fullName>
            <shortName evidence="5">FGAM synthase</shortName>
            <ecNumber evidence="5">6.3.5.3</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Formylglycinamide ribonucleotide amidotransferase subunit III</fullName>
            <shortName evidence="5">FGAR amidotransferase III</shortName>
            <shortName evidence="5">FGAR-AT III</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="5">Phosphoribosylformylglycinamidine synthase subunit III</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5" type="primary">purS</name>
        <name evidence="6" type="ORF">LAX5112_01566</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>ATP + H2O + L-glutamine + N(2)-formyl-N(1)-(5-phospho-beta-D-ribosyl)glycinamide = 2-formamido-N(1)-(5-O-phospho-beta-D-ribosyl)acetamidine + ADP + H(+) + L-glutamate + phosphate</text>
            <dbReference type="Rhea" id="RHEA:17129"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="ChEBI" id="CHEBI:147286"/>
            <dbReference type="ChEBI" id="CHEBI:147287"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.5.3"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="5">Purine metabolism; IMP biosynthesis via de novo pathway; 5-amino-1-(5-phospho-D-ribosyl)imidazole from N(2)-formyl-N(1)-(5-phospho-D-ribosyl)glycinamide: step 1/2.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Part of the FGAM synthase complex composed of 1 PurL, 1 PurQ and 2 PurS subunits.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the PurS family.</text>
    </comment>
    <dbReference type="EC" id="6.3.5.3" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67909.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01566"/>
    <dbReference type="EnsemblBacteria" id="CTQ67909">
        <property type="protein sequence ID" value="CTQ67909"/>
        <property type="gene ID" value="LAX5112_01566"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00074">
        <property type="reaction ID" value="UER00128"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004642">
        <property type="term" value="F:phosphoribosylformylglycinamidine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006189">
        <property type="term" value="P:'de novo' IMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1280.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01926">
        <property type="entry name" value="PurS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003850">
        <property type="entry name" value="PurS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036604">
        <property type="entry name" value="PurS-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34696">
        <property type="entry name" value="PTHR34696"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02700">
        <property type="entry name" value="PurS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82697">
        <property type="entry name" value="SSF82697"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00302">
        <property type="entry name" value="TIGR00302"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="1 5" id="KW-0436">Ligase</keyword>
    <keyword evidence="2 5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3 5" id="KW-0658">Purine biosynthesis</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01926"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ67909.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="79" mass="8306" checksum="16A8F0E99E3446C3" modified="2015-12-09" version="1">MKARVIVTLKNGVLDPQGKAIEGALGGLGFGDVGSVRQGKVFDVELTGSDKDAAKAELEQMCEKLLANTVIENYAIEIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZ69</accession>
    <name>A0A0M6ZZ69_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Methyltransferase</fullName>
            <ecNumber evidence="4">2.1.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">LAX5112_01410</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the trimethylamine methyltransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.-" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67516.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671441.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01410"/>
    <dbReference type="EnsemblBacteria" id="CTQ67516">
        <property type="protein sequence ID" value="CTQ67516"/>
        <property type="gene ID" value="LAX5112_01410"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015948">
        <property type="term" value="P:methanogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.480">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038601">
        <property type="entry name" value="MttB-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010426">
        <property type="entry name" value="MTTB_MeTrfase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06253">
        <property type="entry name" value="MTTB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF037567">
        <property type="entry name" value="MTTB_MeTrfase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 6" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4 6" id="KW-0808">Transferase</keyword>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007137"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRNR" id="PIRNR037567"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ67516.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="515" mass="57241" checksum="9931E9227DDC0A4D" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZ89</accession>
    <name>A0A0M6ZZ89_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01455</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67621.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040452251.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01455"/>
    <dbReference type="EnsemblBacteria" id="CTQ67621">
        <property type="protein sequence ID" value="CTQ67621"/>
        <property type="gene ID" value="LAX5112_01455"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010319">
        <property type="entry name" value="Transglutaminase-like_Cys_pept"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR39327">
        <property type="entry name" value="PTHR39327"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06035">
        <property type="entry name" value="Peptidase_C93"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809202" evidence="1">
        <location>
            <begin position="27"/>
            <end position="204"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67621.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="204" mass="22979" checksum="F8886949FB412DC5" modified="2015-12-09" version="1">MKTLGKFLSTTAVLLGLFGLAPTAHADPGRFMDMKTAVKAPIGHRQFCRDNGWACQNERYEPVVVKLTENRWNELIAINADVNRRVRPMTDADLFGKEEYWTYPVDGYGDCEEYVLEKQRVLIEAGWPKSALLITVAKDIQNGGHAVLTVRTDHGDMILDNQIEAVLPWYSTPYRYIKRQSASSPVKWTGISDTRVTTVSSISN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZF3</accession>
    <name>A0A0M6ZZF3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Flagellar motor switch protein FliM</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="primary">fliM_2</name>
        <name evidence="14" type="ORF">LAX5112_01675</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11">FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Bacterial flagellum basal body</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="3">Cell inner membrane</location>
            <topology evidence="3">Peripheral membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the FliM family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68208.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008196786.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01675"/>
    <dbReference type="EnsemblBacteria" id="CTQ68208">
        <property type="protein sequence ID" value="CTQ68208"/>
        <property type="gene ID" value="LAX5112_01675"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009425">
        <property type="term" value="C:bacterial-type flagellum basal body"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003774">
        <property type="term" value="F:cytoskeletal motor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071973">
        <property type="term" value="P:bacterial-type flagellum-dependent cell motility"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006935">
        <property type="term" value="P:chemotaxis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd17908">
        <property type="entry name" value="FliM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.330.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028976">
        <property type="entry name" value="CheC-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001689">
        <property type="entry name" value="Flag_FliM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001543">
        <property type="entry name" value="FliN-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036429">
        <property type="entry name" value="SpoA-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02154">
        <property type="entry name" value="FliM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01052">
        <property type="entry name" value="FliMN_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00955">
        <property type="entry name" value="FLGMOTORFLIM"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101801">
        <property type="entry name" value="SSF101801"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103039">
        <property type="entry name" value="SSF103039"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01397">
        <property type="entry name" value="fliM_switch"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0975">Bacterial flagellum</keyword>
    <keyword evidence="6" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="14" id="KW-0966">Cell projection</keyword>
    <keyword evidence="7" id="KW-0145">Chemotaxis</keyword>
    <keyword evidence="14" id="KW-0969">Cilium</keyword>
    <keyword evidence="8" id="KW-0283">Flagellar rotation</keyword>
    <keyword evidence="14" id="KW-0282">Flagellum</keyword>
    <keyword evidence="9" id="KW-0472">Membrane</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FliMN_C" evidence="13">
        <location>
            <begin position="321"/>
            <end position="390"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="12">
        <location>
            <begin position="1"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="12">
        <location>
            <begin position="1"/>
            <end position="15"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00021898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022500"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022779"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023143"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00025044"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF01052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="CTQ68208.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="412" mass="44998" checksum="3848AB0E94B665CC" modified="2015-12-09" version="1">MANADDDDDLSEEDMADAWGAALAEQGAGADDDEDLAAAWGAALEEQGAGSSDDMAAQWAAMIDDSEPDLENATRGADRVLNQEEIDNLLGFNIEDTIAGDQSGIRALINSAMVSYERLPMLEIVFDRLVRLTTTSLRNFTSDNVEVSLDSISSVRFGDYLNSIPLPAILGVFKVEEWDGFGLITVESSLIYSIIDVLLGGGRGTTAARVEGRPYTTIETNLVQQMVQLILQDAEQAFAPLSPVHFNLERLETNPRFAAISRPANAAILVELRIDMEDRGGTVEIMMPYATLEPIRDLLLQMFMGEKFGRDPIWEGHLATEIHAAEIEVDAVLYETYLPLGRVLSLDVGQTLVFDVAPTDPVLVKCGNIPLTEGTLGKTEDSIAIRVAKNLRKPKMTLAAFERAMQSEMEQP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZG6</accession>
    <name>A0A0M6ZZG6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Serine-protein kinase RsbW</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01147</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66933.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008196930.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01147"/>
    <dbReference type="EnsemblBacteria" id="CTQ66933">
        <property type="protein sequence ID" value="CTQ66933"/>
        <property type="gene ID" value="LAX5112_01147"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13581">
        <property type="entry name" value="HATPase_c_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="HATPase_c" evidence="1">
        <location>
            <begin position="11"/>
            <end position="132"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13581"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66933.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="147" mass="16137" checksum="F65E72E7307BA67D" modified="2015-12-09" version="1">MTSVLGTLEVANELDELSRIYTFLDDLAARHGLDDHIRRHLSLIVEELFSNTVSYGYPEAVADTIKTELTKEGDRLILTLEDHATSFDTGTAPVLDMTEMSAEDMSVGGLGLFLVHQVSEEVSHSRKDGTNTTRVVLRLGSNGSDQN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZW8</accession>
    <name>A0A0M6ZZW8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative enzyme related to lactoylglutathione lyase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01548</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67861.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008196842.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01548"/>
    <dbReference type="EnsemblBacteria" id="CTQ67861">
        <property type="protein sequence ID" value="CTQ67861"/>
        <property type="gene ID" value="LAX5112_01548"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.180.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029068">
        <property type="entry name" value="Glyas_Bleomycin-R_OHBP_Dase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004360">
        <property type="entry name" value="Glyas_Fos-R_dOase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037523">
        <property type="entry name" value="VOC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00903">
        <property type="entry name" value="Glyoxalase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54593">
        <property type="entry name" value="SSF54593"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51819">
        <property type="entry name" value="VOC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="VOC" evidence="1">
        <location>
            <begin position="4"/>
            <end position="127"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51819"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67861.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="145" mass="15850" checksum="A7CE237DD24CB0E4" modified="2015-12-09" version="1">MDQRISMITLIVPDIMTARAFFETGLGWQVNAAPSPHVVFFQIPGGVFALYDRNALEDEIGSKVTTAPFGAMTLAWNAKARDDVDTMFAKAVAAGARSVKEPQEAFWGGYSSYVEVPGRHLLEIAFNPFWTVTDDGSVLLPDPQP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A056</accession>
    <name>A0A0M7A056_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01546</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67856.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67856">
        <property type="protein sequence ID" value="CTQ67856"/>
        <property type="gene ID" value="LAX5112_01546"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809216" evidence="1">
        <location>
            <begin position="27"/>
            <end position="111"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67856.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="111" mass="11751" checksum="76A264AE1AFCBBAF" modified="2015-12-09" version="1">MKFVNSVIKTAALAGSISFGATAAFAAPPSDGSTLGECYNNWISHCNQTTPGYPNSCYDEVLNHCDSVHSASLGTLSGYKVKSMQRSALTKAKRANTTLVAPKVQPVRVQN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0S2</accession>
    <name>A0A0M7A0S2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_01817</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + L-aspartate = 4-phospho-L-aspartate + ADP</text>
            <dbReference type="Rhea" id="RHEA:23776"/>
            <dbReference type="ChEBI" id="CHEBI:29991"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:57535"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.2.4"/>
        </reaction>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68638.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671536.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01817"/>
    <dbReference type="EnsemblBacteria" id="CTQ68638">
        <property type="protein sequence ID" value="CTQ68638"/>
        <property type="gene ID" value="LAX5112_01817"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004072">
        <property type="term" value="F:aspartate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045865">
        <property type="entry name" value="ACT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027795">
        <property type="entry name" value="CASTOR_ACT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018717">
        <property type="entry name" value="DUF2241"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10000">
        <property type="entry name" value="ACT_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13840">
        <property type="entry name" value="ACT_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55021">
        <property type="entry name" value="SSF55021"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ACT_3" evidence="2">
        <location>
            <begin position="2"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="domain" description="ACT_7" evidence="3">
        <location>
            <begin position="74"/>
            <end position="128"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000709"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF10000"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF13840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ68638.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="134" mass="14771" checksum="491210799D2D1AC4" modified="2015-12-09" version="1">MTGETDLQNLISHMRPMLDPEPYVFCTFATKSLVELAEYEPIGLFSETEGMTAILPLERARELGLAEAEWFRRITLTVHSSLEAVGLTAAVAKALAEQGIPANVVAAFFHDHVFVPEERAEDALNALRTLAETQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0Z1</accession>
    <name>A0A0M7A0Z1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1 5">Thymidylate synthase</fullName>
            <shortName evidence="5">TS</shortName>
            <shortName evidence="5">TSase</shortName>
            <ecNumber evidence="1 5">2.1.1.45</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">thyA_2</name>
        <name evidence="5" type="synonym">thyA</name>
        <name evidence="8" type="ORF">LAX5112_01628</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Catalyzes the reductive methylation of 2'-deoxyuridine-5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>(6R)-5,10-methylene-5,6,7,8-tetrahydrofolate + dUMP = 7,8-dihydrofolate + dTMP</text>
            <dbReference type="Rhea" id="RHEA:12104"/>
            <dbReference type="ChEBI" id="CHEBI:15636"/>
            <dbReference type="ChEBI" id="CHEBI:57451"/>
            <dbReference type="ChEBI" id="CHEBI:63528"/>
            <dbReference type="ChEBI" id="CHEBI:246422"/>
            <dbReference type="EC" id="2.1.1.45"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="5">Pyrimidine metabolism; dTTP biosynthesis.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the thymidylate synthase family. Bacterial-type ThyA subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.45" evidence="1 5"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68082.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671400.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01628"/>
    <dbReference type="EnsemblBacteria" id="CTQ68082">
        <property type="protein sequence ID" value="CTQ68082"/>
        <property type="gene ID" value="LAX5112_01628"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00575"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004799">
        <property type="term" value="F:thymidylate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006231">
        <property type="term" value="P:dTMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006235">
        <property type="term" value="P:dTTP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00351">
        <property type="entry name" value="TS_Pyrimidine_HMase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.572.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00008">
        <property type="entry name" value="Thymidy_synth_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045097">
        <property type="entry name" value="Thymidate_synth/dCMP_Mease"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023451">
        <property type="entry name" value="Thymidate_synth/dCMP_Mease_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036926">
        <property type="entry name" value="Thymidate_synth/dCMP_Mease_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000398">
        <property type="entry name" value="Thymidylate_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020940">
        <property type="entry name" value="Thymidylate_synthase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11548">
        <property type="entry name" value="PTHR11548"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00303">
        <property type="entry name" value="Thymidylat_synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00108">
        <property type="entry name" value="THYMDSNTHASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55831">
        <property type="entry name" value="SSF55831"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03284">
        <property type="entry name" value="thym_sym"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00091">
        <property type="entry name" value="THYMIDYLATE_SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2 5 8" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="4 5" id="KW-0545">Nucleotide biosynthesis</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 5 8" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Thymidylat_synt" evidence="7">
        <location>
            <begin position="2"/>
            <end position="268"/>
        </location>
    </feature>
    <feature type="active site" evidence="6">
        <location>
            <position position="150"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="5">
        <location>
            <position position="150"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="21"/>
        </location>
        <ligand>
            <name>dUMP</name>
            <dbReference type="ChEBI" id="CHEBI:246422"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="51"/>
        </location>
        <ligand>
            <name>(6R)-5,10-methylene-5,6,7,8-tetrahydrofolate</name>
            <dbReference type="ChEBI" id="CHEBI:15636"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="130"/>
            <end position="131"/>
        </location>
        <ligand>
            <name>dUMP</name>
            <dbReference type="ChEBI" id="CHEBI:246422"/>
            <note>ligand shared between dimeric partners</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="170"/>
            <end position="173"/>
        </location>
        <ligand>
            <name>dUMP</name>
            <dbReference type="ChEBI" id="CHEBI:246422"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="173"/>
        </location>
        <ligand>
            <name>(6R)-5,10-methylene-5,6,7,8-tetrahydrofolate</name>
            <dbReference type="ChEBI" id="CHEBI:15636"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="181"/>
        </location>
        <ligand>
            <name>dUMP</name>
            <dbReference type="ChEBI" id="CHEBI:246422"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="211"/>
            <end position="213"/>
        </location>
        <ligand>
            <name>dUMP</name>
            <dbReference type="ChEBI" id="CHEBI:246422"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="267"/>
        </location>
        <ligand>
            <name>(6R)-5,10-methylene-5,6,7,8-tetrahydrofolate</name>
            <dbReference type="ChEBI" id="CHEBI:15636"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00011947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022727"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00303"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ68082.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="268" mass="30289" checksum="BD4DEB5DB9932823" modified="2015-12-09" version="1">MQQYHDLLSKILEDGIDRGDRTGTGTRSIFGHQMRFDLSEGFPLVTTKKLHLRSIIHELLWFVAGDTNIAYLKEHGVKIWDDWADENGDLGPVYGYQWRSWPAPSRDGSGQSIDQISNVLEMIRKSPESRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADVFLGVPFNIASYALLTMMIAQVTGLKPGDFVHTLGDAHLYSNHFDQAREQLTRTPRALPEMKINPAVTDLFAFKYEDFELTGYDPHPHIAAPIAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A183</accession>
    <name>A0A0M7A183_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 7">Flagellar basal-body rod protein FlgG</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6 7">Distal rod protein</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="10" type="primary">flgG_2</name>
        <name evidence="10" type="ORF">LAX5112_01678</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="5 7">The basal body constitutes a major portion of the flagellar organelle and consists of four rings (L,P,S, and M) mounted on a central rod. The rod consists of about 26 subunits of FlgG in the distal portion, and FlgB, FlgC and FlgF are thought to build up the proximal portion of the rod with about 6 subunits each.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 7">Bacterial flagellum basal body</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the flagella basal body rod proteins family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68216.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008189934.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01678"/>
    <dbReference type="EnsemblBacteria" id="CTQ68216">
        <property type="protein sequence ID" value="CTQ68216"/>
        <property type="gene ID" value="LAX5112_01678"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009426">
        <property type="term" value="C:bacterial-type flagellum basal body, distal rod"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071973">
        <property type="term" value="P:bacterial-type flagellum-dependent cell motility"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001444">
        <property type="entry name" value="Flag_bb_rod_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019776">
        <property type="entry name" value="Flagellar_basal_body_rod_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020013">
        <property type="entry name" value="Flagellar_FlgE/F/G"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010930">
        <property type="entry name" value="Flg_bb/hook_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037925">
        <property type="entry name" value="FlgE/F/G-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012834">
        <property type="entry name" value="FlgG_G_neg"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00460">
        <property type="entry name" value="Flg_bb_rod"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06429">
        <property type="entry name" value="Flg_bbr_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF117143">
        <property type="entry name" value="SSF117143"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03506">
        <property type="entry name" value="FlgEFG_subfam"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02488">
        <property type="entry name" value="flgG_G_neg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00588">
        <property type="entry name" value="FLAGELLA_BB_ROD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7" id="KW-0975">Bacterial flagellum</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Flg_bb_rod" evidence="8">
        <location>
            <begin position="4"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="domain" description="Flg_bbr_C" evidence="9">
        <location>
            <begin position="181"/>
            <end position="258"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009677"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00017948"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023143"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00025933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00032912"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU362116"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00460"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF06429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ68216.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="260" mass="28088" checksum="BDAEADF72A7B2FC3" modified="2015-12-09" version="1">MRALYTAATGMKAQEYNVEVISNNVANMRTTGYKKQRADFQDLLYQNLRRMGTETSDDGTIVPTGIQIGTGVKLASTGRVMSQGSMENTGKELDIAIRGEGFFQIQLPGGATGYSRDGSFERDQNGQLVTIDGYQLDPNITIPENTRDLTIAPSGKVQGVDEAGATVDLGQIQLARFVNKAGLEAIGDNLFLETDASGAPQTGNPNEDGYGSTQQFFLEMANVDAVTEIADLISAQRAYEMNSKVIQAADQMYSTTTQIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1Z3</accession>
    <name>A0A0M7A1Z3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Inositol-1-monophosphatase</fullName>
            <ecNumber evidence="1">3.1.3.25</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">suhB_1</name>
        <name evidence="1" type="ORF">LAX5112_01759</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.3.25" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68492.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671489.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01759"/>
    <dbReference type="EnsemblBacteria" id="CTQ68492">
        <property type="protein sequence ID" value="CTQ68492"/>
        <property type="gene ID" value="LAX5112_01759"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008934">
        <property type="term" value="F:inositol monophosphate 1-phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052832">
        <property type="term" value="F:inositol monophosphate 3-phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052833">
        <property type="term" value="F:inositol monophosphate 4-phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046855">
        <property type="term" value="P:inositol phosphate dephosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000760">
        <property type="entry name" value="Inositol_monophosphatase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00459">
        <property type="entry name" value="Inositol_P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00377">
        <property type="entry name" value="IMPHPHTASES"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ68492.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="261" mass="27650" checksum="E0EC93FF2DA564D8" modified="2015-12-09" version="1">MVDHLTEFARTANDLADAAGDILRTAWFSEGAVSYKADRSALTEADTDVENRLRNLIAHRHPDHGILGEEFGAEDLDKEFVWVLDPIDGTRQFGARLLNFGVLIALCHHGKPVIGVIDQPIGHIRYCGIKGGGATLNGRCITSRKDADLDHAVLSLANPNSFCGESRRGFDALNSIGAMTGFDGGCLAYGALARGMVDVCLNGPDLDPLDICALVPIVEEAGGCITDWSGAPLSLSSRGAIVASGSIQLHETVLDLLTGQT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A268</accession>
    <name>A0A0M7A268_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 4">Acylphosphatase</fullName>
            <ecNumber evidence="3 4">3.6.1.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">acyP</name>
        <name evidence="7" type="ORF">LAX5112_01776</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>an acyl phosphate + H2O = a carboxylate + H(+) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:14965"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29067"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:59918"/>
            <dbReference type="EC" id="3.6.1.7"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the acylphosphatase family.</text>
    </comment>
    <dbReference type="EC" id="3.6.1.7" evidence="3 4"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68536.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671503.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01776"/>
    <dbReference type="EnsemblBacteria" id="CTQ68536">
        <property type="protein sequence ID" value="CTQ68536"/>
        <property type="gene ID" value="LAX5112_01776"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003998">
        <property type="term" value="F:acylphosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020456">
        <property type="entry name" value="Acylphosphatase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001792">
        <property type="entry name" value="Acylphosphatase-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036046">
        <property type="entry name" value="Acylphosphatase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017968">
        <property type="entry name" value="Acylphosphatase_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47268">
        <property type="entry name" value="PTHR47268"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00708">
        <property type="entry name" value="Acylphosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00112">
        <property type="entry name" value="ACYLPHPHTASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54975">
        <property type="entry name" value="SSF54975"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00151">
        <property type="entry name" value="ACYLPHOSPHATASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51160">
        <property type="entry name" value="ACYLPHOSPHATASE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Acylphosphatase-like" evidence="6">
        <location>
            <begin position="7"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="active site" evidence="4">
        <location>
            <position position="22"/>
        </location>
    </feature>
    <feature type="active site" evidence="4">
        <location>
            <position position="40"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000744"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012150"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00520"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU004168"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51160"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ68536.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="95" mass="10233" checksum="CBFAC93006FB9EF2" modified="2015-12-09" version="1">MTQDPLTVHLLIEGRVQGVGYRAWCAEEAVARDLSGWARNLKTGAVEAVISGPSDTVVDMMDALWHGPALARVTSVSDLEPVEPATGRFTVRETV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A274</accession>
    <name>A0A0M7A274_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">30S ribosomal protein S7</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7 11" type="primary">rpsG</name>
        <name evidence="11" type="ORF">LAX5112_01722</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Part of the 30S ribosomal subunit. Contacts proteins S9 and S11.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 7 8">Belongs to the universal ribosomal protein uS7 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68390.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040450747.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01722"/>
    <dbReference type="EnsemblBacteria" id="CTQ68390">
        <property type="protein sequence ID" value="CTQ68390"/>
        <property type="gene ID" value="LAX5112_01722"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015935">
        <property type="term" value="C:small ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.455.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00480_B">
        <property type="entry name" value="Ribosomal_S7_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000235">
        <property type="entry name" value="Ribosomal_S5/S7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005717">
        <property type="entry name" value="Ribosomal_S7_bac/org-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020606">
        <property type="entry name" value="Ribosomal_S7_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023798">
        <property type="entry name" value="Ribosomal_S7_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036823">
        <property type="entry name" value="Ribosomal_S7_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11205">
        <property type="entry name" value="PTHR11205"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00177">
        <property type="entry name" value="Ribosomal_S7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002122">
        <property type="entry name" value="RPS7p_RPS7a_RPS5e_RPS7o"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47973">
        <property type="entry name" value="SSF47973"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01029">
        <property type="entry name" value="rpsG_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00052">
        <property type="entry name" value="RIBOSOMAL_S7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 7 8" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="5 7 8" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="4 7 9" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="3 7 9" id="KW-0699">rRNA-binding</keyword>
    <keyword evidence="2 7" id="KW-0820">tRNA-binding</keyword>
    <feature type="domain" description="Ribosomal_S7" evidence="10">
        <location>
            <begin position="1"/>
            <end position="149"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007151"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00480"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU003619"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU003620"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF00177"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ68390.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="156" mass="18047" checksum="CF13BC3D922E30AF" modified="2015-12-09" version="1">MSRRHRAEKREINPDPKFGDMVVTKFMNSIMYDGKKSTAERIVYGAFDVVENKTRENPIEVFHAALENVMPQVEVRSRRVGGATYQVPVEVRTERRQALAIRWLIAAARNRNETTMVDRLSGELLDAANNRGTAVKKREDTHRMADANRAFSHYRW</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2J9</accession>
    <name>A0A0M7A2J9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01859</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68712.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01859"/>
    <dbReference type="EnsemblBacteria" id="CTQ68712">
        <property type="protein sequence ID" value="CTQ68712"/>
        <property type="gene ID" value="LAX5112_01859"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009325">
        <property type="entry name" value="DUF983"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06170">
        <property type="entry name" value="DUF983"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="74"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="99"/>
            <end position="118"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68712.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="156" mass="17549" checksum="B6E15FF19C3C03A1" modified="2015-12-09" version="1">MTVRYELNGVEETIDEAPEKPKRPLMQAMMRGAMGRCMSCGKGQLFDGFLATQDACSNCGEEFHHQRADDAPPYFTITIVGHIIIPGLLIVEMMWRPELWIHMAIWIPLTIILSLALMRPIKGALVGLQWAFYMHGFDPDAEDDLPAASPHLESPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A301</accession>
    <name>A0A0M7A301_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Branched-chain amino acid transport protein (AzlD)</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01841</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68680.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040450696.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01841"/>
    <dbReference type="EnsemblBacteria" id="CTQ68680">
        <property type="protein sequence ID" value="CTQ68680"/>
        <property type="gene ID" value="LAX5112_01841"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008407">
        <property type="entry name" value="Brnchd-chn_aa_trnsp_AzlD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05437">
        <property type="entry name" value="AzlD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="44"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="76"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="98"/>
            <end position="115"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68680.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="117" mass="12900" checksum="88AE9639E34117C8" modified="2015-12-09" version="1">MSDLMTETWWWPYVMILVAGWLATDVWRWLGVFAGGKLREDSELFIWVRCVATALVAGVISKLVLFPQGVLGDTPIWLRLAAAAFGFVCFLALGQRVIVGVLSAVVFLLTGWVILGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A349</accession>
    <name>A0A0M7A349_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">p-hydroxybenzoic acid efflux pump subunit AaeB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">aaeB</name>
        <name evidence="2" type="ORF">LAX5112_01655</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68153.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671421.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01655"/>
    <dbReference type="EnsemblBacteria" id="CTQ68153">
        <property type="protein sequence ID" value="CTQ68153"/>
        <property type="gene ID" value="LAX5112_01655"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006726">
        <property type="entry name" value="PHBA_efflux_AaeB/fusaric-R"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04632">
        <property type="entry name" value="FUSC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="77"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="102"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="133"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="171"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="196"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="235"/>
            <end position="259"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="271"/>
            <end position="289"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="301"/>
            <end position="323"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68153.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="341" mass="36155" checksum="8A8549F0F42319B3" modified="2015-12-09" version="1">MTANEGLRLRTALACWCAVLLALFLNLDNPWWAAISAFIVSGADRKTVVSKGALRVIGTVIGCAAAFYAVTFFAGQYLTLSVLIIGSIVFGIYKRYTSPYSYAWTLACVTGTLVLFVSLQNPGETRAFAIDRCLEISTGVLAAMLVELLLNPRPISGEQDTIPADAETRRHAMEAAVFAGIIMVTILLLDRYFNLPSPIQIAVTATVMIPLQIGYGPKKAFDRLSGCLIGGSTGLAVVVFLPANLLVWSLFLIAGIFVFSRTHFSGQSNAYVGTQAVLAYLMTMVTGSGPPTTVEPVLDRLAGIIIGVVILVIGNLLAAELGFGHSSQGASSSEKKPTAPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A405</accession>
    <name>A0A0M7A405_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Ferrous-iron efflux pump FieF</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">fieF</name>
        <name evidence="9" type="ORF">LAX5112_02258</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69805.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671881.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02258"/>
    <dbReference type="EnsemblBacteria" id="CTQ69805">
        <property type="protein sequence ID" value="CTQ69805"/>
        <property type="gene ID" value="LAX5112_02258"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008324">
        <property type="term" value="F:cation transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1510.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1350">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002524">
        <property type="entry name" value="Cation_efflux"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027470">
        <property type="entry name" value="Cation_efflux_CTD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036837">
        <property type="entry name" value="Cation_efflux_CTD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027469">
        <property type="entry name" value="Cation_efflux_TMD_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01545">
        <property type="entry name" value="Cation_efflux"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16916">
        <property type="entry name" value="ZT_dimer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF160240">
        <property type="entry name" value="SSF160240"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161111">
        <property type="entry name" value="SSF161111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01297">
        <property type="entry name" value="CDF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="9"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="43"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="77"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="110"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="151"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="179"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="domain" description="ZT_dimer" evidence="8">
        <location>
            <begin position="210"/>
            <end position="286"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008114"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF16916"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ69805.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="297" mass="31352" checksum="A83B59961FD6C1D4" modified="2015-12-09" version="1">MAVGLQLRIAFFSIAIGLVVLGLKFGAYWLTGSVALYSDALETIVNVASSFAALIAVWFASKPADSNHPYGHDKAEYFAAVLVGVMIVLAALSIFRAAWIGLVHGDSPDFSPLGIGLNVLAALINGLWAAYLTQVGRKVRSPALVADGKHLFTDVVSSLGVLIGVVLVLLTGWTILDSVLAILVGLAVLWSGWGLVKESVGGLMDEAASADVLEKIRLQISEQGEGALEAHDLRTRIAGKTTFIDFHLVVSGSMTVESAHEICDRIEAAISEGVPGARITIHVEPEHKAKHSGIVVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5C5</accession>
    <name>A0A0M7A5C5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">3-dehydroquinate synthase</fullName>
            <shortName evidence="10">DHQS</shortName>
            <ecNumber evidence="10">4.2.3.4</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10 12" type="primary">aroB</name>
        <name evidence="12" type="ORF">LAX5112_02265</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>7-phospho-2-dehydro-3-deoxy-D-arabino-heptonate = 3-dehydroquinate + phosphate</text>
            <dbReference type="Rhea" id="RHEA:21968"/>
            <dbReference type="ChEBI" id="CHEBI:32364"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58394"/>
            <dbReference type="EC" id="4.2.3.4"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="10">
            <name>Co(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:48828"/>
        </cofactor>
        <cofactor evidence="10">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="10">Binds 1 divalent metal cation per subunit. Can use either Co(2+) or Zn(2+).</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 10">
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="10">Metabolic intermediate biosynthesis; chorismate biosynthesis; chorismate from D-erythrose 4-phosphate and phosphoenolpyruvate: step 2/7.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="10">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 10">Belongs to the sugar phosphate cyclases superfamily. Dehydroquinate synthase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="4.2.3.4" evidence="10"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69817.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671929.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02265"/>
    <dbReference type="EnsemblBacteria" id="CTQ69817">
        <property type="protein sequence ID" value="CTQ69817"/>
        <property type="gene ID" value="LAX5112_02265"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00053">
        <property type="reaction ID" value="UER00085"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003856">
        <property type="term" value="F:3-dehydroquinate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009073">
        <property type="term" value="P:aromatic amino acid family biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008652">
        <property type="term" value="P:cellular amino acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009423">
        <property type="term" value="P:chorismate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00110">
        <property type="entry name" value="DHQ_synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016037">
        <property type="entry name" value="DHQ_synth_AroB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030963">
        <property type="entry name" value="DHQ_synth_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030960">
        <property type="entry name" value="DHQS/DOIS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01761">
        <property type="entry name" value="DHQ_synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001455">
        <property type="entry name" value="DHQ_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01357">
        <property type="entry name" value="aroB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="7 10" id="KW-0057">Aromatic amino acid biosynthesis</keyword>
    <keyword evidence="9 10" id="KW-0170">Cobalt</keyword>
    <keyword evidence="10" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="8 10 12" id="KW-0456">Lyase</keyword>
    <keyword evidence="3 10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6 10" id="KW-0520">NAD</keyword>
    <keyword evidence="4 10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 10" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="DHQ_synthase" evidence="11">
        <location>
            <begin position="82"/>
            <end position="345"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <begin position="120"/>
            <end position="124"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <begin position="144"/>
            <end position="145"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="157"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="166"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="199"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="261"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="280"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001911"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005412"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023285"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF01761"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ69817.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="382" mass="40670" checksum="9BB5A7EDAFE78E4E" modified="2015-12-09" version="1">MANLDAADAITPQAVQTVRVDLGARSYDIRIGRNVLETAGAEIAVVLPGARLAVIVDENVARLHLEAFGASLEKAGIDFTPITVPAGESTKCFSQFERLCDEVLNARLERNDAIVALGGGVVGDLTGFVASAVRRGMAFIQVPTSLLAQVDSSVGGKTGINSRHGKNLIGAFHQPALVLADTAILDTLTPRDFRAGYAEVAKYGLLGDADFFAWLEINWQGIFAGGQERDEAVARSCQAKADVVAADELESGRRALLNLGHTFGHALEGAVSYETERLVHGEGVSIGMMLAHEFSEKLGLIGADTVGRVERHLTDVGLPIRITDIPGQLPGVDVFMDLIAQDKKVSRGALTFVLTRGIGDAFVEKGVNPYLVSEFLKEKLNP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5Y1</accession>
    <name>A0A0M7A5Y1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Carboxylate/amino acid/amine transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02320</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70011.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02320"/>
    <dbReference type="EnsemblBacteria" id="CTQ70011">
        <property type="protein sequence ID" value="CTQ70011"/>
        <property type="gene ID" value="LAX5112_02320"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000620">
        <property type="entry name" value="EamA_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00892">
        <property type="entry name" value="EamA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="15"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="47"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="81"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="104"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="132"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="155"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="187"/>
            <end position="210"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="222"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="253"/>
            <end position="273"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="279"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="domain" description="EamA" evidence="2">
        <location>
            <begin position="17"/>
            <end position="148"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ70011.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="307" mass="33108" checksum="AECF47B14D7BD451" modified="2015-12-09" version="1">MRQRSPAIDVSENPLQAILLMSGAMLIVPVMDIIAKYLSSSIHPLEITFGRFVFQFLVSLVFALILLRLPRPGGQQPFVNFLRGILLASASLCFFIAVKYMSVATAISIFFVEPMILTILAALILKEPVGPRRIGAIAVGLAGALIILRPNLAEIGLVSLLPVATAVLFSFYLLLNRLYPVRDDLLTIQLSAGLAGSLYLGAILIVATTFDVGDVVFVWPNAWQAGLLTLIGLISFCAHGLVVAAFQRGSASLLAPLQYLEIVSATLFGFLVFADFPDLLTWVGIGLIVGSGLYITHRERVRKQAAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A723</accession>
    <name>A0A0M7A723_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Lysine 6-dehydrogenase</fullName>
            <ecNumber evidence="3">1.4.1.18</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">lysDH</name>
        <name evidence="3" type="ORF">LAX5112_02419</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.4.1.18" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70226.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672028.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02419"/>
    <dbReference type="EnsemblBacteria" id="CTQ70226">
        <property type="protein sequence ID" value="CTQ70226"/>
        <property type="gene ID" value="LAX5112_02419"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050303">
        <property type="term" value="F:lysine 6-dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029752">
        <property type="entry name" value="D-isomer_DH_CS1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032095">
        <property type="entry name" value="Sacchrp_dh-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005097">
        <property type="entry name" value="Sacchrp_dh_NADP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16653">
        <property type="entry name" value="Sacchrp_dh_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03435">
        <property type="entry name" value="Sacchrp_dh_NADP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00065">
        <property type="entry name" value="D_2_HYDROXYACID_DH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Sacchrp_dh_NADP" evidence="1">
        <location>
            <begin position="4"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="domain" description="Sacchrp_dh_C" evidence="2">
        <location>
            <begin position="116"/>
            <end position="336"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03435"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF16653"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ70226.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="352" mass="38633" checksum="13AE8D48601EB3FD" modified="2015-12-09" version="1">MKKIAVLGLGKVGALAARLLHDSGFEVYAYDQHAPREELPFSVQSADLKAYDGLLQMFKGVDAVLSCLPYQLNVGVATAAHATGIHYFDLTEDVPTTKAIIEMSETAKGLMAPQCGLAPGFVGIVGAKQISDFDNCRSCRMRVGALPQNPTGLMGYAFNWSPDGVVNEYLNDCEVIEDGVRKWVSPMEWLETVYIDGMKLEAFTTSGGLGTMCETYLGKVANIDYKTMRYPGHAELMNFFFHELLMRERREEAGEILVHAKPPTDNDVVYVHVASEGTIDGRPRREEFVRAYKPIEIGGQMRTAIAWTTSASVVAVIEMVRDGALPATGFLKQEDIPLDGFLKTRTGSLYAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7F5</accession>
    <name>A0A0M7A7F5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02549</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70551.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70551">
        <property type="protein sequence ID" value="CTQ70551"/>
        <property type="gene ID" value="LAX5112_02549"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="88"/>
            <end position="145"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70551.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="170" mass="19459" checksum="373BED8DF7DCC894" modified="2015-12-09" version="1">MARKDHETFDQGCDDNSDHNDGQRSHDLTENITDQEDRHKGRNGRQACGKDRRQHRGCPVDSRVFRTVTHGLPGRCMLTDHNRIINNHTKHHDEGEHGDHVDALAHQPHDPERCHHGDRNASCDPKRDPCVEEQEQNPDHEHETSQPVFDQQVDAALHGIGADIVFQDFQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9I4</accession>
    <name>A0A0M7A9I4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 10">Beta sliding clamp</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="primary">dnaN</name>
        <name evidence="14" type="ORF">LAX5112_02765</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="15" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of replication as well as for processivity of DNA replication.</text>
    </comment>
    <comment type="subunit">
        <text evidence="10">Forms a ring-shaped head-to-tail homodimer around DNA.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 10">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 10">Belongs to the beta sliding clamp family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71277.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02765"/>
    <dbReference type="EnsemblBacteria" id="CTQ71277">
        <property type="protein sequence ID" value="CTQ71277"/>
        <property type="gene ID" value="LAX5112_02765"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009360">
        <property type="term" value="C:DNA polymerase III complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008408">
        <property type="term" value="F:3'-5' exonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003887">
        <property type="term" value="F:DNA-directed DNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00140">
        <property type="entry name" value="beta_clamp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001001">
        <property type="entry name" value="DNA_polIII_beta"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022635">
        <property type="entry name" value="DNA_polIII_beta_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022637">
        <property type="entry name" value="DNA_polIII_beta_cen"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022634">
        <property type="entry name" value="DNA_polIII_beta_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30478">
        <property type="entry name" value="PTHR30478"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00712">
        <property type="entry name" value="DNA_pol3_beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02767">
        <property type="entry name" value="DNA_pol3_beta_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02768">
        <property type="entry name" value="DNA_pol3_beta_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000804">
        <property type="entry name" value="DNA_pol_III_b"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00480">
        <property type="entry name" value="POL3Bc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00663">
        <property type="entry name" value="dnan"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 10" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7 10" id="KW-0235">DNA replication</keyword>
    <keyword evidence="9" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8 10" id="KW-0239">DNA-directed DNA polymerase</keyword>
    <keyword evidence="6 10 14" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 10 14" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="DNA_pol3_beta" evidence="11">
        <location>
            <begin position="4"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="domain" description="DNA_pol3_beta_2" evidence="12">
        <location>
            <begin position="134"/>
            <end position="252"/>
        </location>
    </feature>
    <feature type="domain" description="DNA_pol3_beta_3" evidence="13">
        <location>
            <begin position="255"/>
            <end position="374"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010752"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00021035"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRNR" id="PIRNR000804"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF00712"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF02767"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF02768"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="CTQ71277.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="375" mass="41242" checksum="C6C7A661676BC5E7" modified="2015-12-09" version="1">MQRMKATLERTDLLKSLTHVHRVVERRNTIPILSNVLLRADGGALNLKATDLDLEIVETVPAMIEMPGATTVPAHMFYDIVRKLPEGSQVVLETTGDDTTLEIRAGRSKFTLQMLPETDFPDLTAGDFSHGFTLSASDIRKLIDTTQFAISTEETRYYLNGIYLHTVDATNGQQFRAVATDGHRLAQAEVSAPSGSSGMPGIIVPRKTVGEIQKLLENPEADVQIELSDTKIRITTDTVVLTSKLIDGTFPDYGRVIPQGNDKEMRVDRDEFKEAVDRVSTISSERGRAVKLALGDGRLVLTVNNPDSGSATEELAVEYESDPLEIGFNSRYLLDIANQLSSDTALFRLADSGSPTLIQDNTVDDCLFVLMPMRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9X2</accession>
    <name>A0A0M7A9X2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Putative diguanylate cyclase YeaP</fullName>
            <ecNumber evidence="8">2.7.7.65</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">yeaP</name>
        <name evidence="8" type="ORF">LAX5112_02816</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.7.7.65" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71421.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02816"/>
    <dbReference type="EnsemblBacteria" id="CTQ71421">
        <property type="protein sequence ID" value="CTQ71421"/>
        <property type="gene ID" value="LAX5112_02816"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052621">
        <property type="term" value="F:diguanylate cyclase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901564">
        <property type="term" value="P:organonitrogen compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006796">
        <property type="term" value="P:phosphate-containing compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044238">
        <property type="term" value="P:primary metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="CDD" id="cd01949">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.450.350">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006189">
        <property type="entry name" value="CHASE_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042240">
        <property type="entry name" value="CHASE_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000160">
        <property type="entry name" value="GGDEF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03924">
        <property type="entry name" value="CHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00990">
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01079">
        <property type="entry name" value="CHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00267">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00254">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50839">
        <property type="entry name" value="CHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50887">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0808">Transferase</keyword>
    <keyword evidence="1 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="15"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="274"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="domain" description="CHASE" evidence="6">
        <location>
            <begin position="121"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="domain" description="GGDEF" evidence="7">
        <location>
            <begin position="336"/>
            <end position="469"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="453"/>
            <end position="476"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50839"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ71421.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="476" mass="52180" checksum="55308D1B2BB43496" modified="2015-12-09" version="1">MNALRQFFVHSNGAWVASLTAVICFLAGIAVTAHVGYTVRSEIMSQNKRQAVANLSEVRAKLEGELNRTVAYGIGLRANVIESSKEPFNARKYDAIASDLIDENPVIRSIGLAPDNILQAVYPYQPNQSAIGLDYRLNTSQWPAIRQAMLSREIVIAGPLELVQGGRALLIRIPVFPPSELGQPMPERPYWGVLSLVVDEAGLMQAAGIADTVKQLRIGIVDKAASTPEKAHIFGSFGLMDIDSVSLPLNLPGGLKWEVLGYPENGWNSNERSIWITQLVGSLISLLFGAMAFLLISEVYKVRSMALHDPLTGLANRRLLEDRMLQLAVMSDRTGSGFEIFYVDLDAFKPINDNYGHAAGDQLLVEIGHRLQQQTRQTDTVARVGGDEFIVLTPGNMRRLEREAFLERLGERLSEVFEFSGVRIGVSASIGSASFPSDAGTIDDLLRVADSRMYSQKTKGRKKPETVSGNELPQTG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9Y4</accession>
    <name>A0A0M7A9Y4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Beta-hexosaminidase A</fullName>
            <ecNumber evidence="5">3.2.1.52</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">LAX5112_02985</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.2.1.52" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71955.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672487.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02985"/>
    <dbReference type="EnsemblBacteria" id="CTQ71955">
        <property type="protein sequence ID" value="CTQ71955"/>
        <property type="gene ID" value="LAX5112_02985"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004563">
        <property type="term" value="F:beta-N-acetylhexosaminidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102148">
        <property type="term" value="F:N-acetyl-beta-D-galactosaminidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001764">
        <property type="entry name" value="Glyco_hydro_3_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036962">
        <property type="entry name" value="Glyco_hydro_3_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00933">
        <property type="entry name" value="Glyco_hydro_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 5" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="1 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glyco_hydro_3" evidence="4">
        <location>
            <begin position="44"/>
            <end position="376"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="399"/>
            <end position="422"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ71955.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="422" mass="44995" checksum="206CAFFA5C638D70" modified="2015-12-09" version="1">MTKRSLSLAAVLLLFPLLLAALWSALFQAGPNRHLSVGPEASALERKVGQLIMVGFNGTNPMDPGVMAVSGQLASGRIGGVMLLGRNIQTPDQLTTLTHHLADQNSGSSVLIAVDQEGGQVQRLAPLGDPMTWSAAKDLPAATGNCAPRKVRAYYARRAAQLGAYNINVNFGPVVDVDINPGNPIIGKKKRSFSADPTTVTNCAAGFIAAHQAAGIATALKHFPGHGSSTTDSHTSLPVISQSWRERELEPYRVLKRQDRVDMVMMGHLVHPRFSDTPETPASLSKKGIAEARALAGKDVVIITDDLEMDAVAGRYSIEEAAVQAIAAGNDVVLFSSFERTDPELGDRVNAAIMSAVTDGRISETQVDQAAARVAALKHRLHRFRVNLVPNQETASFRLEPENRSRSRTVATTVLSSAPAAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABI2</accession>
    <name>A0A0M7ABI2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">L-threonine dehydratase catabolic TdcB</fullName>
            <ecNumber evidence="4">4.3.1.19</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">tdcB_2</name>
        <name evidence="4" type="ORF">LAX5112_02714</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <dbReference type="EC" id="4.3.1.19" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71093.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672268.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02714"/>
    <dbReference type="EnsemblBacteria" id="CTQ71093">
        <property type="protein sequence ID" value="CTQ71093"/>
        <property type="gene ID" value="LAX5112_02714"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004794">
        <property type="term" value="F:L-threonine ammonia-lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006520">
        <property type="term" value="P:cellular amino acid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1100">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001926">
        <property type="entry name" value="PLP-dep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000634">
        <property type="entry name" value="Ser/Thr_deHydtase_PyrdxlP-BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036052">
        <property type="entry name" value="Trypto_synt_PLP_dependent"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00291">
        <property type="entry name" value="PALP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53686">
        <property type="entry name" value="SSF53686"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00165">
        <property type="entry name" value="DEHYDRATASE_SER_THR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0456">Lyase</keyword>
    <keyword evidence="2" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PALP" evidence="3">
        <location>
            <begin position="30"/>
            <end position="322"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00291"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ71093.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="336" mass="34957" checksum="C73E8927B53845FC" modified="2015-12-09" version="1">MTGATAERPSSTSAAVTYGDVLEAADALEGVAVKTPLLTNPALDERVGGRVLIKPECLQRSGSFKFRGAYNCLRQLEPDVRARGGVACSSGNHAQGIASSAKIFGMPATIVMPADAPQVKLERTRGYGATVITYDRATEDRDKIASEICAETGATFVHPYNDPAVIAGQGTVGLEMAAQARDLGLQLDDVLACTGGGGLSSGIALALANTSAETVFHTVEPQFFDDYKRSLEAGELLSNPAKSGSICDALLSESPGEIGFSILRQFAGEGFTVTDEQVLDAVAFAFSELKLVVEPGGAAALAALLSGKLDLRERTVGVVLTGGNIDPKMLFKAVSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABT4</accession>
    <name>A0A0M7ABT4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Photosynthetic reaction center H subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">puhA</name>
        <name evidence="4" type="ORF">LAX5112_02951</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71856.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_050776198.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02951"/>
    <dbReference type="EnsemblBacteria" id="CTQ71856">
        <property type="protein sequence ID" value="CTQ71856"/>
        <property type="gene ID" value="LAX5112_02951"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030077">
        <property type="term" value="C:plasma membrane light-harvesting complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045156">
        <property type="term" value="F:electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019684">
        <property type="term" value="P:photosynthesis, light reaction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.50.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.540.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014747">
        <property type="entry name" value="Bac_photo_RC_H_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005652">
        <property type="entry name" value="Photo_RC_H"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015810">
        <property type="entry name" value="Photo_RC_H_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037097">
        <property type="entry name" value="Photo_RC_H_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027275">
        <property type="entry name" value="PRC-brl_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011033">
        <property type="entry name" value="PRC_barrel-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05239">
        <property type="entry name" value="PRC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03967">
        <property type="entry name" value="PRCH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50346">
        <property type="entry name" value="SSF50346"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01150">
        <property type="entry name" value="puhA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="domain" description="PRCH" evidence="2">
        <location>
            <begin position="4"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="domain" description="PRC" evidence="3">
        <location>
            <begin position="147"/>
            <end position="202"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF03967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF05239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ71856.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="259" mass="28506" checksum="B3C6E3ADC3AC4A81" modified="2015-12-09" version="1">MTGSIVGSIDVAQVVLYVFWVFFAGLIWYIRQEDRREGYPLEDDVTGRFNKDPWLFVPDKKTFVLPHGHGTVQVPDLKRDDRPLNAKRVSPAPGYPMEPEGNPLLAGVGPGSWAERADTPDLTAHGDARIVPMNEAEGFSIADGELDPIGLPVVGCDSSSAGTVKDVWVDRAEFLIRYYEVEIEGAEKTVLLPNNFVVIKRGRGNKPYLYVHAITSEQFADVPAHAKPGTVTLLEEDKIAAYFGAGLLYALKNRGEPLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABX4</accession>
    <name>A0A0M7ABX4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Hca operon transcriptional activator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">hcaR_3</name>
        <name evidence="3" type="ORF">LAX5112_03069</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72147.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03069"/>
    <dbReference type="EnsemblBacteria" id="CTQ72147">
        <property type="protein sequence ID" value="CTQ72147"/>
        <property type="gene ID" value="LAX5112_03069"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00039">
        <property type="entry name" value="HTHLYSR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="60"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ72147.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="312" mass="34903" checksum="C4E691F2E9E40B68" modified="2015-12-09" version="1">MNLSIRQLATFREVMRCGSISEAARTLGRTQPAISSTISGLETELELKLFVREQGRLVPTPEAEFFLEEADAILKRLEISKRTLRGLANREQGQLRIACIPEVVEDFLPDVISRFLSDKTKVNIALASKSSAEIEDLIAAQHFDIGIAETPKVRSSFDQLDFELECMCALSSSDPLASKEVITPADLDGYPLALLHPEHRSHKQTLDRFRDTGVQINQRFELQTSKPGLKFVEAGLCALICDMVTAFKTQEIYKHGFGPPLIVFRPFRPRIQNNLSILTPTHRPISIVAKEFSDTLGKRISGIRSSMIRLVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AC88</accession>
    <name>A0A0M7AC88_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">3-hydroxyacyl-CoA dehydrogenase</fullName>
            <ecNumber evidence="2">1.1.1.35</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">fadJ_2</name>
        <name evidence="10" type="ORF">LAX5112_03008</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>a (3S)-3-hydroxyacyl-CoA + NAD(+) = a 3-oxoacyl-CoA + H(+) + NADH</text>
            <dbReference type="Rhea" id="RHEA:22432"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57318"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:90726"/>
            <dbReference type="EC" id="1.1.1.35"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1">Lipid metabolism; fatty acid beta-oxidation.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.35" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72016.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672503.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03008"/>
    <dbReference type="EnsemblBacteria" id="CTQ72016">
        <property type="protein sequence ID" value="CTQ72016"/>
        <property type="gene ID" value="LAX5112_03008"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00659"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003857">
        <property type="term" value="F:3-hydroxyacyl-CoA dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070403">
        <property type="term" value="F:NAD+ binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006635">
        <property type="term" value="P:fatty acid beta-oxidation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006176">
        <property type="entry name" value="3-OHacyl-CoA_DH_NAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006108">
        <property type="entry name" value="3HC_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008927">
        <property type="entry name" value="6-PGluconate_DH-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029045">
        <property type="entry name" value="ClpP/crotonase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001753">
        <property type="entry name" value="Enoyl-CoA_hydra/iso"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00725">
        <property type="entry name" value="3HCDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02737">
        <property type="entry name" value="3HCDH_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00378">
        <property type="entry name" value="ECH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48179">
        <property type="entry name" value="SSF48179"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52096">
        <property type="entry name" value="SSF52096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0276">Fatty acid metabolism</keyword>
    <keyword evidence="4" id="KW-0442">Lipid degradation</keyword>
    <keyword evidence="6" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="5" id="KW-0520">NAD</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="3HCDH_N" evidence="9">
        <location>
            <begin position="326"/>
            <end position="504"/>
        </location>
    </feature>
    <feature type="domain" description="3HCDH" evidence="8">
        <location>
            <begin position="507"/>
            <end position="604"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00013000"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022832"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022963"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023693"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00725"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF02737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ72016.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="736" mass="80938" checksum="CDCC1460D8A360FB" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACC3</accession>
    <name>A0A0M7ACC3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">MltA-interacting protein MipA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">LAX5112_03027</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the MipA/OmpV family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72056.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03027"/>
    <dbReference type="EnsemblBacteria" id="CTQ72056">
        <property type="protein sequence ID" value="CTQ72056"/>
        <property type="gene ID" value="LAX5112_03027"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009279">
        <property type="term" value="C:cell outer membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010583">
        <property type="entry name" value="MipA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38776">
        <property type="entry name" value="PTHR38776"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06629">
        <property type="entry name" value="MipA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0998">Cell outer membrane</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="5">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809580" evidence="5">
        <location>
            <begin position="28"/>
            <end position="281"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023237"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ72056.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="281" mass="29943" checksum="5C98C14778970038" modified="2015-12-09" version="1">MRICFGRSPGAVVIVAMVCCAPAVVYADESARGRFDEQAAGAQSGIHGILAVGVAAEPEFEGAAEYLPIPQAYAHITAFGLGLEIEGPEARLNLRPHSAFQFGPAVEYRMGRDNVANDVIDRLEAIDGAFEAGGFVTYQFKSLMAQSDVFEISAELMADVSGVHEGVIGKVRAGYWVAPRERLRVGLETEVGFATDDYMSTYFGVSEAGSIRSGLATYTAEGGLKDIGVQATMTYQLTDRWGLVGRASYTRLLGDAANSPIVQDEGSADQFRGGVGLSFKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACJ5</accession>
    <name>A0A0M7ACJ5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Universal stress protein F</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03083</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72172.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672569.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72172">
        <property type="protein sequence ID" value="CTQ72172"/>
        <property type="gene ID" value="LAX5112_03083"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006016">
        <property type="entry name" value="UspA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00582">
        <property type="entry name" value="Usp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Usp" evidence="1">
        <location>
            <begin position="1"/>
            <end position="137"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00582"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72172.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="137" mass="14575" checksum="09B88DD63B0B1EDF" modified="2015-12-09" version="1">MFKKILVPIDLRHPDALEKAISATAAIAKSENIPVVFAAVSTAAPSALAHNPDELQSKMAEFAEAQGRQHGINATGQAFFSHDPSIDLENALLKAIDETGADLVVMATHVPHLSDRFWPSNGGRIASHAGVSVFLVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACK9</accession>
    <name>A0A0M7ACK9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Ureidoglycolate lyase</fullName>
            <ecNumber evidence="3">4.3.2.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03316</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="4.3.2.3" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72818.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672738.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03316"/>
    <dbReference type="EnsemblBacteria" id="CTQ72818">
        <property type="protein sequence ID" value="CTQ72818"/>
        <property type="gene ID" value="LAX5112_03316"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050385">
        <property type="term" value="F:ureidoglycolate lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.850.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041072">
        <property type="entry name" value="FAA_hydro_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011234">
        <property type="entry name" value="Fumarylacetoacetase-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036663">
        <property type="entry name" value="Fumarylacetoacetase_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18288">
        <property type="entry name" value="FAA_hydro_N_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01557">
        <property type="entry name" value="FAA_hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56529">
        <property type="entry name" value="SSF56529"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0456">Lyase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FAA_hydro_N_2" evidence="2">
        <location>
            <begin position="1"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="domain" description="FAA_hydrolase" evidence="1">
        <location>
            <begin position="83"/>
            <end position="332"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01557"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF18288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ72818.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="336" mass="35975" checksum="366602A7B5697DB9" modified="2015-12-09" version="1">MKLASLKDGSRDGKLVVVNERLTYCTDASHIAPTLQAALDDWDHVAPKLQVLAESLSHDAVPTLRFHEHDALSPLPRAYQWADGSAYVNHVELVRKARGAKMPESFWTDPLMYQGGSDTFIAPRDPIKMRDEAYGIDMEGEIAVITGDVPMGVSAEEALSHVKLVLLVNDVSLRGLIPGELGKGFGFFQSKPSSAFSPVAVTPDELGEAWRNGKLHLPLHVDLNGQPFGRAEGGADMTFDFGQLIAHAAKTRTLSAGTIIGSGTVSNKLDGGPGKSLSDGGAGYSCIAELRVIETIENGEATTPFLKFGDAIRIEMLDGEGHSIFGAIEQTVQQAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACL1</accession>
    <name>A0A0M7ACL1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Oligopeptide transport system permease protein OppC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">oppC</name>
        <name evidence="8" type="ORF">LAX5112_03335</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="6">Cell membrane</location>
            <topology evidence="6">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72855.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672751.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03335"/>
    <dbReference type="EnsemblBacteria" id="CTQ72855">
        <property type="protein sequence ID" value="CTQ72855"/>
        <property type="gene ID" value="LAX5112_03335"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025966">
        <property type="entry name" value="OppC_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12911">
        <property type="entry name" value="OppC_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="31"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="176"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="216"/>
            <end position="247"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="295"/>
            <end position="320"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="340"/>
            <end position="363"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="7">
        <location>
            <begin position="174"/>
            <end position="363"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ72855.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="375" mass="41340" checksum="C8F0E59F35253E93" modified="2015-12-09" version="1">MSVTTPDTIGVPQRGRSLWDDARDRLLANKAAVASMIVLATIALLSAFGPILSPHDYDTVYRDYVKVPSSLGAYPKPDQVEPAFEALVKRARLNLESYERVGDQVVAEVTSRRAIDPRSTRYIDRSDLFKNAALSDLADDDKRATLTADINYLHFYFGTDANGRDLMTRTFIAGRVSLTIGLLATVVAITIGVLYGATSGYLGGRADQLMMRVVDILYSLPFIFFVIMLVVFFGRNFILMFIAVGAVEWLDMARIVRGQTLTIKRQEFVQAAEAMGVGDGGIVRRHIIPNTLGPVVVYMTLLVPKVILLESFLSFLGLGIQEPMTSWGVLISEGARNLQGSAWMLIFPSIFLTSTLFALNFIGDGLRDALDPKDR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACN7</accession>
    <name>A0A0M7ACN7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Aspartate aminotransferase</fullName>
            <ecNumber evidence="2">2.6.1.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03085</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.6.1.1" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72176.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672571.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03085"/>
    <dbReference type="EnsemblBacteria" id="CTQ72176">
        <property type="protein sequence ID" value="CTQ72176"/>
        <property type="gene ID" value="LAX5112_03085"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004069">
        <property type="term" value="F:L-aspartate:2-oxoglutarate aminotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009058">
        <property type="term" value="P:biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004839">
        <property type="entry name" value="Aminotransferase_I/II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00155">
        <property type="entry name" value="Aminotran_1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Aminotran_1_2" evidence="1">
        <location>
            <begin position="31"/>
            <end position="382"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72176.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="391" mass="42521" checksum="B82F94D1442ED6E1" modified="2015-12-09" version="1">MKTISGFDRIGEENAFAVLARATQLASEGHDIINLGIGQPDFQTPDHIVEAAIKALRDGHHGYTPATGIAPLREAVSADLHKRHNVDSNPDNAVIVPGGKVTMFMAILMFGEPGVDILYPDPGFPIYRSMIEFTGARPVPVPIREENNFAFSAEETLSLMTDKTRLLILNSPANPTGGVTPRSEIERLVKGLAAFPDAAVLSDEIYSQMTYDGMEHVSLLSFPEIRDRLILLDGWSKTYAMTGWRLGFSLWPDQLIDKARKLAVNAWSCVNAPAQYAALAALTGPQGAVHAMVREFDQRRKIVVEGLNAIDGITCKTPLGAFYAYPNIKQTGWPAKKLASALLEEAGVAVIGGPDFGVLGEGYIRLSYANSSENIQRALERIEIFLSGQKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AD79</accession>
    <name>A0A0M7AD79_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Glycerol-3-phosphate dehydrogenase</fullName>
            <ecNumber evidence="6">1.1.5.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">glpD</name>
        <name evidence="9" type="ORF">LAX5112_03235</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>a quinone + sn-glycerol 3-phosphate = a quinol + dihydroxyacetone phosphate</text>
            <dbReference type="Rhea" id="RHEA:18977"/>
            <dbReference type="ChEBI" id="CHEBI:24646"/>
            <dbReference type="ChEBI" id="CHEBI:57597"/>
            <dbReference type="ChEBI" id="CHEBI:57642"/>
            <dbReference type="ChEBI" id="CHEBI:132124"/>
            <dbReference type="EC" id="1.1.5.3"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 6">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.1.5.3" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72587.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672659.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03235"/>
    <dbReference type="EnsemblBacteria" id="CTQ72587">
        <property type="protein sequence ID" value="CTQ72587"/>
        <property type="gene ID" value="LAX5112_03235"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009331">
        <property type="term" value="C:glycerol-3-phosphate dehydrogenase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052591">
        <property type="term" value="F:sn-glycerol-3-phosphate:ubiquinone-8 oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006072">
        <property type="term" value="P:glycerol-3-phosphate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.870">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031656">
        <property type="entry name" value="DAO_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038299">
        <property type="entry name" value="DAO_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006076">
        <property type="entry name" value="FAD-dep_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000447">
        <property type="entry name" value="G3P_DH_FAD-dep"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11985">
        <property type="entry name" value="PTHR11985"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01266">
        <property type="entry name" value="DAO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16901">
        <property type="entry name" value="DAO_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01001">
        <property type="entry name" value="FADG3PDH"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00977">
        <property type="entry name" value="FAD_G3PDH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0274">FAD</keyword>
    <keyword evidence="3 6" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="5 6 9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DAO" evidence="7">
        <location>
            <begin position="6"/>
            <end position="362"/>
        </location>
    </feature>
    <feature type="domain" description="DAO_C" evidence="8">
        <location>
            <begin position="385"/>
            <end position="490"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007330"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU361217"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF01266"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF16901"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ72587.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="506" mass="56219" checksum="255D400A36BDE7C9" modified="2015-12-09" version="1">MAADYDLLVIGGGINGAGIARDAVGRGASVMLVEMGDLAGATSSASTKLIHGGLRYLEYYEFDLVRKALKEREVLWKLAPHIAWPLRFILPHHKDLRPAWLLRLGLFMYDHLGGRKLLPATNTVPLDQGTYSKGLKKLFKKGFEYSDCWVDDARLVVLNARDAADRGAEVLTRTKCVSARRDGDHWQVVLKDLSSGTERAVTASVLVNAAGPWVAEMLRGVVGANNSSAIRLVKGSHIIVPRQFEHDRCFIFQNGDGRIVFAIPYENDFTLIGTTDVDYQDDLGKVQISQDEVEYLCKAVSEYLETPVTPDDVVHTYSGVRPLYDDGAKDAKAATRDYVLELDAGDQKPAVLSVFGGKITTYRKLSEHVLGKLKPHLPFKRDEWTDQDVLPGGNFNVLAFEEEVSALQAHYPFLDKTFATRLIRLYGTDARSILGKAAQFSDLGQLFGYNLYEAEVKWLVSREWARTAEDVLWRRTKLGLRLSEVETAALDNYLSAHLAELVGTAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADH7</accession>
    <name>A0A0M7ADH7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">UPF0276 protein LAX5112_03120</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03120</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UPF0276 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72270.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672595.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03120"/>
    <dbReference type="EnsemblBacteria" id="CTQ72270">
        <property type="protein sequence ID" value="CTQ72270"/>
        <property type="gene ID" value="LAX5112_03120"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00697">
        <property type="entry name" value="UPF0276"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007801">
        <property type="entry name" value="UPF0276"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036237">
        <property type="entry name" value="Xyl_isomerase-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42194">
        <property type="entry name" value="PTHR42194"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05114">
        <property type="entry name" value="DUF692"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51658">
        <property type="entry name" value="SSF51658"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00697"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72270.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="298" mass="32887" checksum="F022F20FD0A3F7F6" modified="2015-12-09" version="1">MRSDTQPVSAFCTPAAVPKRPGAGLKAEHVADILQSRPDIGFFEVHAENYMGAGGRPHQQLTAIRDIYPLSLHGVGLSIGGEGPLDKDHLSRLAELNKRYEPGLFSEHLAWSTHETTYYNDLLPVPYDHATLTRVCDHIDEVQDVMGRQMLLENPSTYIAYAQSTISELDFLKEVTRRTGCGLLLDVNNVYVSCTNQEQSPAAYLAEFPMQCVGEIHLGGHAPDRDEAGRPLLIDAHDRAVDDAVWALYKDVIGMHGALPTLIEWDNDVPAWPVLLREADAAQEILLRAEDADLKAVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADU2</accession>
    <name>A0A0M7ADU2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03301</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72787.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72787">
        <property type="protein sequence ID" value="CTQ72787"/>
        <property type="gene ID" value="LAX5112_03301"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ72787.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="53" mass="6292" checksum="D10566A3A6B9343B" modified="2015-12-09" version="1">MKILKARFGKLEFVYDELVEFLIAIVGHFVSSGWDFSNTRRRHRSIDHCGRRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AE37</accession>
    <name>A0A0M7AE37_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">sn-glycerol-3-phosphate-binding periplasmic protein UgpB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ugpB_2</name>
        <name evidence="7" type="ORF">LAX5112_03512</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the bacterial solute-binding protein 1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73348.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672885.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03512"/>
    <dbReference type="EnsemblBacteria" id="CTQ73348">
        <property type="protein sequence ID" value="CTQ73348"/>
        <property type="gene ID" value="LAX5112_03512"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006059">
        <property type="entry name" value="SBP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13416">
        <property type="entry name" value="SBP_bac_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0574">Periplasm</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="6">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809379" evidence="6">
        <location>
            <begin position="20"/>
            <end position="419"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008520"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ73348.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="419" mass="46157" checksum="D9139CC4D2057FC2" modified="2015-12-09" version="1">MKKTLTAIALLLAASAAHADEKVTIEFAYPYSHLFDVTYEKILPKFNEQFPNIEVKIRATYESYEDGTNTILREAVAGTLPDVTMQGLNRQAILVEKGIAKSLEPFILKEETFEKDGYHDAMLKLGSFNDDIYGLPFSVSLPVGYYNMDVMAKAGITTVADLPKSWDEVVEVCGKLHEAGVRNPMFWGWNITGNWFLQALMWSQDKATMEGNAFQVSSDEGLKSLETMKGIFRGCDMQNIEWKAALASFSAGEIGMMFWSTSALGAVERAKGDFELKTNEYPGIEASGPKGLPAGGNAAMLVSSSEDPKVLNAAWEWLKFITSGEGAADVARTTGYMPPNKAANEVILADFYQQNPNKETAVRQLPLLRDWQAYPGDNGLAITQVIYDGIEGIVTGEFDDMAELQEQLDEEVSDLLPSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AE58</accession>
    <name>A0A0M7AE58_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Morphology and auto-aggregation control protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">oxyR_1</name>
        <name evidence="3" type="ORF">LAX5112_03362</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72911.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672774.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72911">
        <property type="protein sequence ID" value="CTQ72911"/>
        <property type="gene ID" value="LAX5112_03362"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00039">
        <property type="entry name" value="HTHLYSR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="4"/>
            <end position="61"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ72911.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="301" mass="32891" checksum="D59FFF842008176B" modified="2015-12-09" version="1">MINITLKQLRYFEALARHGHFGRAAEDCAISQPALSMQIKELEEVLGAPLFERTARQVSLTGFGEEAVERARAILRSADELGDLARASKETLEGRLRIGVIPTVAPYLLPQVVSRLTARYPGLDIHVRETVTPKLVQELNDGRLDTAILALPVSEPGLAETPLFEENFVLVRPGSEANLPVPCADSLKEMRLLLLEEGHCFRDQALSFCDIQTGRPREVLDASSLSTLVQMVNAGMGVTFIPEMAVPVETRSADVAVSRFEPPEPARTLGMVWRKSSPLAGQLTEIADLVRDAAQSKSTAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFB7</accession>
    <name>A0A0M7AFB7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Precorrin-6A reductase</fullName>
            <ecNumber evidence="4">1.3.1.54</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">cobK</name>
        <name evidence="4" type="ORF">LAX5112_03651</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Cofactor biosynthesis; adenosylcobalamin biosynthesis.</text>
    </comment>
    <dbReference type="EC" id="1.3.1.54" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73768.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03651"/>
    <dbReference type="EnsemblBacteria" id="CTQ73768">
        <property type="protein sequence ID" value="CTQ73768"/>
        <property type="gene ID" value="LAX5112_03651"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00148"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016994">
        <property type="term" value="F:precorrin-6A reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009236">
        <property type="term" value="P:cobalamin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003723">
        <property type="entry name" value="Precorrin-6x_reduct"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36925">
        <property type="entry name" value="PTHR36925"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02571">
        <property type="entry name" value="CbiJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51014">
        <property type="entry name" value="COBK_CBIJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0169">Cobalamin biosynthesis</keyword>
    <keyword evidence="3 4" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004953"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022573"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ73768.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="251" mass="27457" checksum="5357F90F594F4E40" modified="2015-12-09" version="1">MTTDQPHILLLAGTFEARVLAKKLEEKFSGVRLTASFAGAVKDLPDLGVPTRIGGFGGIEGLCQHLQTENVSLIIDATHPFAAQMSWNAFHAAERENTAILRLERPAWQQVPNDLWHPVASMGDAADAIPEGAHAFLAVGRKEIATFYRRGDIIGTARMIEPPPVPLPDHWSLVLARPPQSTEEEVELFKEKGITHVVTKNSGGTRAYAKVEAARQMQLPVIMVDRPELPSTDTAATVNGVLDWTDRLMNT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="34" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFI4</accession>
    <name>A0A0M7AFI4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Tyrosine--tRNA ligase</fullName>
            <ecNumber evidence="7">6.1.1.1</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Tyrosyl-tRNA synthetase</fullName>
            <shortName evidence="7">TyrRS</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="10" type="primary">tyrS_2</name>
        <name evidence="7" type="synonym">tyrS</name>
        <name evidence="10" type="ORF">LAX5112_03530</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>ATP + L-tyrosine + tRNA(Tyr) = AMP + diphosphate + H(+) + L-tyrosyl-tRNA(Tyr)</text>
            <dbReference type="Rhea" id="RHEA:10220"/>
            <dbReference type="Rhea" id="RHEA-COMP:9706"/>
            <dbReference type="Rhea" id="RHEA-COMP:9707"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:58315"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78536"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.1"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="7">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.1" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73397.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672897.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03530"/>
    <dbReference type="EnsemblBacteria" id="CTQ73397">
        <property type="protein sequence ID" value="CTQ73397"/>
        <property type="gene ID" value="LAX5112_03530"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004831">
        <property type="term" value="F:tyrosine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006437">
        <property type="term" value="P:tyrosyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00165">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00805">
        <property type="entry name" value="TyrRS_core"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.290.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02006">
        <property type="entry name" value="Tyr_tRNA_synth_type1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002305">
        <property type="entry name" value="aa-tRNA-synth_Ic"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002942">
        <property type="entry name" value="S4_RNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036986">
        <property type="entry name" value="S4_RNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002307">
        <property type="entry name" value="Tyr-tRNA-ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024088">
        <property type="entry name" value="Tyr-tRNA-ligase_bac-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024107">
        <property type="entry name" value="Tyr-tRNA-ligase_bac_1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11766">
        <property type="entry name" value="PTHR11766"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00579">
        <property type="entry name" value="tRNA-synt_1b"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01040">
        <property type="entry name" value="TRNASYNTHTYR"/>
    </dbReference>
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        <property type="entry name" value="tyrS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7 8" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="4 7 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2 7 8" id="KW-0436">Ligase</keyword>
    <keyword evidence="3 7 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5 7 8" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="74"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="'HIGH' region" evidence="7">
        <location>
            <begin position="44"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="'KMSKS' region" evidence="7">
        <location>
            <begin position="236"/>
            <end position="240"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="39"/>
        </location>
        <ligand>
            <name>L-tyrosine</name>
            <dbReference type="ChEBI" id="CHEBI:58315"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="176"/>
        </location>
        <ligand>
            <name>L-tyrosine</name>
            <dbReference type="ChEBI" id="CHEBI:58315"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="180"/>
        </location>
        <ligand>
            <name>L-tyrosine</name>
            <dbReference type="ChEBI" id="CHEBI:58315"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="239"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000069"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02006"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU363036"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ73397.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="417" mass="46144" checksum="C15AF8B53AB61035" modified="2015-12-09" version="1">MSEFKSEFLKVLSERGFVHQISDPQGLDELCAKETVTAYIGFDCTAPSLHAGSLVTIMMLYWFQQTGHRPIALMGSGTTRVGDPTGKDESRKVLSDETIEENKAGIRKVFEKLLTFGDGPKDAVMMDNADWLLKLNYMEFLRDIGRHFSVNQMIQRDSVKLRLEREQHLSFLEFNYMLLQGYDFLEIYQQTGCRLQMGGSDQWSNILSGVDLIRRKESKEAFALTAPLLTTSSGAKMGKTAAGAVWLNEEQLSAYDYWQYWRNTEDADVEKFLKLFTILPLDEISRLAALDGAGINEAKKVLATEATAMIHGREKAEAAAETARKAFEEGQSAEGLPTVEVASADLEAGLGVLNAFVTAGLCASNGDVRRNIKGGAVKINDKGEQDANRQLTLADVTEDGIIKLSLGKKKHVLLKPV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFQ6</accession>
    <name>A0A0M7AFQ6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03545</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73441.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672908.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ73441">
        <property type="protein sequence ID" value="CTQ73441"/>
        <property type="gene ID" value="LAX5112_03545"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ73441.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="563" mass="61387" checksum="F53F37F3C261E8B8" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGF6</accession>
    <name>A0A0M7AGF6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="11">RTX-I toxin determinant B</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">apxIB_2</name>
        <name evidence="11" type="ORF">LAX5112_03273</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72694.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672688.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03273"/>
    <dbReference type="EnsemblBacteria" id="CTQ72694">
        <property type="protein sequence ID" value="CTQ72694"/>
        <property type="gene ID" value="LAX5112_03273"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008643">
        <property type="term" value="P:carbohydrate transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1560.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011527">
        <property type="entry name" value="ABC1_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036640">
        <property type="entry name" value="ABC1_TM_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039421">
        <property type="entry name" value="Type_1_exporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24221">
        <property type="entry name" value="PTHR24221"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00664">
        <property type="entry name" value="ABC_membrane"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90123">
        <property type="entry name" value="SSF90123"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50929">
        <property type="entry name" value="ABC_TM1F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="3 7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0762">Sugar transport</keyword>
    <keyword evidence="2 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="179"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="212"/>
            <end position="233"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="294"/>
            <end position="314"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="320"/>
            <end position="337"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="401"/>
            <end position="423"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="10">
        <location>
            <begin position="182"/>
            <end position="461"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="9">
        <location>
            <begin position="495"/>
            <end position="728"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="529"/>
            <end position="536"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022597"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ72694.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="728" mass="80205" checksum="BF35C11D889C43A6" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AH67</accession>
    <name>A0A0M7AH67_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 6">Imidazoleglycerol-phosphate dehydratase</fullName>
            <shortName evidence="5">IGPD</shortName>
            <ecNumber evidence="5 6">4.2.1.19</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 7" type="primary">hisB</name>
        <name evidence="7" type="ORF">LAX5112_03811</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="5 6">
            <text>D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate = 3-(imidazol-4-yl)-2-oxopropyl phosphate + H2O</text>
            <dbReference type="Rhea" id="RHEA:11040"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:57766"/>
            <dbReference type="ChEBI" id="CHEBI:58278"/>
            <dbReference type="EC" id="4.2.1.19"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1 5 6">Amino-acid biosynthesis; L-histidine biosynthesis; L-histidine from 5-phospho-alpha-D-ribose 1-diphosphate: step 6/9.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5 6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5 6">Belongs to the imidazoleglycerol-phosphate dehydratase family.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.19" evidence="5 6"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74249.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673118.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03811"/>
    <dbReference type="EnsemblBacteria" id="CTQ74249">
        <property type="protein sequence ID" value="CTQ74249"/>
        <property type="gene ID" value="LAX5112_03811"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00031">
        <property type="reaction ID" value="UER00011"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004424">
        <property type="term" value="F:imidazoleglycerol-phosphate dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000105">
        <property type="term" value="P:histidine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd07914">
        <property type="entry name" value="IGPD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.40">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00076">
        <property type="entry name" value="HisB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038494">
        <property type="entry name" value="IGPD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000807">
        <property type="entry name" value="ImidazoleglycerolP_deHydtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020565">
        <property type="entry name" value="ImidazoleglycerP_deHydtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23133">
        <property type="entry name" value="PTHR23133"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00475">
        <property type="entry name" value="IGPD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="SSF54211"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00954">
        <property type="entry name" value="IGP_DEHYDRATASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00955">
        <property type="entry name" value="IGP_DEHYDRATASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 5" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 5 6" id="KW-0368">Histidine biosynthesis</keyword>
    <keyword evidence="4 5 6" id="KW-0456">Lyase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005047"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU000599"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ74249.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="197" mass="21684" checksum="8AB42E8EB9BAC177" modified="2015-12-09" version="1">MRTASVSRDTKETKISVEINLDGTGAYDVQTGVGFFDHMLEQLARHSLIDIKVRADGDTHIDFHHTVEDTGIALGQALSKAIGDMAGITRYADTHLAMDEALTRCALDVSGRPFLVWDVTFDRDKVGDFDTELFEEFFRAFAMNGGLTLHIANLYGSNCHHIAETCFKAVARALRKAVEIDPRQADRVPTTKGQLGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHE3</accession>
    <name>A0A0M7AHE3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">PHB domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03415</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ73044.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672813.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ73044">
        <property type="protein sequence ID" value="CTQ73044"/>
        <property type="gene ID" value="LAX5112_03415"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001107">
        <property type="entry name" value="Band_7"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01145">
        <property type="entry name" value="Band_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="41"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="domain" description="PHB" evidence="2">
        <location>
            <begin position="198"/>
            <end position="465"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01145"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ73044.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="595" mass="64384" checksum="A480AE0825EF0ECD" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHL8</accession>
    <name>A0A0M7AHL8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Fumarate reductase flavoprotein subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ifcA_1</name>
        <name evidence="5" type="ORF">LAX5112_03431</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73124.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672841.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03431"/>
    <dbReference type="EnsemblBacteria" id="CTQ73124">
        <property type="protein sequence ID" value="CTQ73124"/>
        <property type="gene ID" value="LAX5112_03431"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008152">
        <property type="term" value="P:metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.700.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012831">
        <property type="entry name" value="CobZ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003953">
        <property type="entry name" value="FAD-binding_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027477">
        <property type="entry name" value="Succ_DH/fumarate_Rdtase_cat_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00890">
        <property type="entry name" value="FAD_binding_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56425">
        <property type="entry name" value="SSF56425"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02485">
        <property type="entry name" value="CobZ_N-term"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FAD_binding_2" evidence="4">
        <location>
            <begin position="6"/>
            <end position="433"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00890"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ73124.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="461" mass="50179" checksum="B3454DF74C9813C5" modified="2015-12-09" version="1">MTNLYDIAVIGGGNAALCAAITAAELGAHVVIFETAPKAYRGGNSRHTRNFRCMHSGPLGPLVEDYLEEEYFEDLLKVTDGKTDERLARLAIRTSEECLPWMEEHGVRFQPSLSGTLSLARTNAFFLGGGKSLVNAYYRTAEKLGIEVLYEANVTHLELDGNRIAHLDYEHEGESKRIAPKAVVVASGGFQADTDWLTRAWGPPAKNFLIRGTPYNRGIVLADLLDQGVQSVGDPTQCHAVAIDGRAPKFDGGIVTRLDCVPFSIVVNKNAERFYDEGEDVWPKRYAIWGRLVANQPDQVGYVIIDSKSLDLFMPSVFPPIKADTLEELAEKMGLPPVQLKDTVETFNSACGDTSKFHPTELDGVKTTGINLPKTNWARPIDAPPFYGYSLKTGVTFTYLGLKVDENAQCSTQDGPITNLWAAGETMAGSILGQGYLAGFGMTIGTVFGRVAGQEAANYAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHT3</accession>
    <name>A0A0M7AHT3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03723</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74002.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008196545.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74002">
        <property type="protein sequence ID" value="CTQ74002"/>
        <property type="gene ID" value="LAX5112_03723"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="25"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="25"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="46"/>
            <end position="60"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74002.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="70" mass="7581" checksum="252EB00F4F738EDC" modified="2015-12-09" version="1">MASVSDSTSSSAAYSAAAVRSELATNAVRDQNEQERQVAQQLEESQATDEQDRREQRQIPGLGEAVDITV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AI25</accession>
    <name>A0A0M7AI25_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Acetyl-coenzyme A synthetase</fullName>
            <shortName evidence="5">AcCoA synthetase</shortName>
            <shortName evidence="5">Acs</shortName>
            <ecNumber evidence="5">6.2.1.1</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Acetate--CoA ligase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="5">Acyl-activating enzyme</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9" type="primary">acsA_3</name>
        <name evidence="5" type="synonym">acsA</name>
        <name evidence="9" type="ORF">LAX5112_03756</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>acetate + ATP + CoA = acetyl-CoA + AMP + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:23176"/>
            <dbReference type="ChEBI" id="CHEBI:30089"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57288"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.2.1.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="5">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="PTM">
        <text evidence="5">Acetylated. Deacetylation by the SIR2-homolog deacetylase activates the enzyme.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the ATP-dependent AMP-binding enzyme family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="6.2.1.1" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74092.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673078.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03756"/>
    <dbReference type="EnsemblBacteria" id="CTQ74092">
        <property type="protein sequence ID" value="CTQ74092"/>
        <property type="gene ID" value="LAX5112_03756"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003987">
        <property type="term" value="F:acetate-CoA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016208">
        <property type="term" value="F:AMP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019427">
        <property type="term" value="P:acetyl-CoA biosynthetic process from acetate"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12780">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01123">
        <property type="entry name" value="Ac_CoA_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011904">
        <property type="entry name" value="Ac_CoA_lig"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032387">
        <property type="entry name" value="ACAS_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025110">
        <property type="entry name" value="AMP-bd_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045851">
        <property type="entry name" value="AMP-bd_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020845">
        <property type="entry name" value="AMP-binding_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000873">
        <property type="entry name" value="AMP-dep_Synth/Lig"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042099">
        <property type="entry name" value="ANL_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16177">
        <property type="entry name" value="ACAS_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00501">
        <property type="entry name" value="AMP-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13193">
        <property type="entry name" value="AMP-binding_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02188">
        <property type="entry name" value="Ac_CoA_lig_AcsA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00455">
        <property type="entry name" value="AMP_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0007">Acetylation</keyword>
    <keyword evidence="3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 5 9" id="KW-0436">Ligase</keyword>
    <keyword evidence="5" id="KW-0460">Magnesium</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2 5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ACAS_N" evidence="8">
        <location>
            <begin position="23"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="domain" description="AMP-binding" evidence="6">
        <location>
            <begin position="83"/>
            <end position="518"/>
        </location>
    </feature>
    <feature type="domain" description="AMP-binding_C" evidence="7">
        <location>
            <begin position="527"/>
            <end position="605"/>
        </location>
    </feature>
    <feature type="region of interest" description="Coenzyme A binding" evidence="5">
        <location>
            <begin position="190"/>
            <end position="193"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="307"/>
        </location>
        <ligand>
            <name>CoA</name>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="383"/>
            <end position="385"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="407"/>
            <end position="412"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="496"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="511"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="519"/>
        </location>
        <ligand>
            <name>CoA</name>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="522"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="533"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="535"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="538"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="580"/>
        </location>
        <ligand>
            <name>CoA</name>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
        </ligand>
    </feature>
    <feature type="modified residue" description="N6-acetyllysine" evidence="5">
        <location>
            <position position="605"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022990"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF13193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF16177"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ74092.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="645" mass="71275" checksum="8FBDC2858BA01255" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AI72</accession>
    <name>A0A0M7AI72_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">C4-dicarboxylate-binding periplasmic protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">dctP_7</name>
        <name evidence="4" type="ORF">LAX5112_03764</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the bacterial solute-binding protein 7 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74116.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673085.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03764"/>
    <dbReference type="EnsemblBacteria" id="CTQ74116">
        <property type="protein sequence ID" value="CTQ74116"/>
        <property type="gene ID" value="LAX5112_03764"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071702">
        <property type="term" value="P:organic substance transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.190.170">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018389">
        <property type="entry name" value="DctP_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038404">
        <property type="entry name" value="TRAP_DctP_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33376">
        <property type="entry name" value="PTHR33376"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03480">
        <property type="entry name" value="DctP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809346" evidence="3">
        <location>
            <begin position="24"/>
            <end position="330"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ74116.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="330" mass="35355" checksum="FF5A57F44248ABF2" modified="2015-12-09" version="1">MKAFTWALGAAMALGMTAGSSFAADTTLRISLQLPLTSHLGQNLTLFKKEVEKNSNGDIAVEIYDSAQLYKDKEVPAAVGAGAIEMGVASLTRYVGDIPAVDIFYQPFLFDTEDKVRAAVAPGSPVRGPLDEAIKDTGSTVLWWQAYGGAIMLSQDGPIKTPEDMKGKKVRVFGKTLGDFVTAAGGAPTLISGSEQYLAYQRGTVDIGMTGVSGVKSRKLWEVMDTITVTNHADIEFIVVVNTDFWNGLPDAHKEIIQAAALTAENDVRDRMSQIEAGAYAAAEENGMSVYRPTAEEISAWRAVSQPVYDAYGEKAGDLGKQVMDAAQKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJ81</accession>
    <name>A0A0M7AJ81_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Inner membrane protein YrbG</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">yrbG_2</name>
        <name evidence="7" type="ORF">LAX5112_04133</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75168.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673392.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75168">
        <property type="protein sequence ID" value="CTQ75168"/>
        <property type="gene ID" value="LAX5112_04133"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1420.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004481">
        <property type="entry name" value="K/Na/Ca-exchanger"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004837">
        <property type="entry name" value="NaCa_Exmemb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044880">
        <property type="entry name" value="NCX_ion-bd_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10846">
        <property type="entry name" value="PTHR10846"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01699">
        <property type="entry name" value="Na_Ca_ex"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00367">
        <property type="entry name" value="TIGR00367"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="6"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="35"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="68"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="105"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="130"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="184"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="222"/>
            <end position="245"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="257"/>
            <end position="277"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="289"/>
            <end position="307"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="314"/>
            <end position="333"/>
        </location>
    </feature>
    <feature type="domain" description="Na_Ca_ex" evidence="6">
        <location>
            <begin position="8"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="domain" description="Na_Ca_ex" evidence="6">
        <location>
            <begin position="188"/>
            <end position="327"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF01699"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ75168.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="334" mass="33945" checksum="4B79F287C0A48816" modified="2015-12-09" version="1">MLFDYLSLAGGLVALIIAGDVLVRGSVGVAQRLGIPNLVIGLTIVAFGTSAPELVISLKAALGNASGIAIGNVVGSNIANVLLVLGLPALIAVTPCGEQGATRTAIFMVAVTLVFIALCFFTPIGLWDGVLLLALLAVFLGGSTIAARRHRKDLKAAAAGADVTAEAMETGDELEDVDDVPDSIWVALIYIGLGLVGLPLGAHFTISGATTIASAWGVSDAVIGLTVIALGTSLPELATTVMAAIRQHGAVAIGNVIGSNIFNLLAIIGITAVVVPIDVPQEVLKLDIWVMLACAVLLTALAGFKVCLGRISGFVMTAAYGLYIASVYMLGYAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJ95</accession>
    <name>A0A0M7AJ95_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Protein adenylyltransferase SelO</fullName>
            <ecNumber evidence="9">2.7.7.n1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">selO</name>
        <name evidence="10" type="ORF">LAX5112_03931</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>ATP + L-seryl-[protein] = 3-O-(5'-adenylyl)-L-seryl-[protein] + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:58120"/>
            <dbReference type="Rhea" id="RHEA-COMP:9863"/>
            <dbReference type="Rhea" id="RHEA-COMP:15073"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:142516"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>ATP + L-threonyl-[protein] = 3-O-(5'-adenylyl)-L-threonyl-[protein] + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:54292"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:13847"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:138113"/>
            <dbReference type="EC" id="2.7.7.n1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>ATP + L-tyrosyl-[protein] = diphosphate + O-(5'-adenylyl)-L-tyrosyl-[protein]</text>
            <dbReference type="Rhea" id="RHEA:54288"/>
            <dbReference type="Rhea" id="RHEA-COMP:10136"/>
            <dbReference type="Rhea" id="RHEA-COMP:13846"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:46858"/>
            <dbReference type="ChEBI" id="CHEBI:83624"/>
            <dbReference type="EC" id="2.7.7.n1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 9">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the SELO family.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.n1" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74641.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673227.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03931"/>
    <dbReference type="EnsemblBacteria" id="CTQ74641">
        <property type="protein sequence ID" value="CTQ74641"/>
        <property type="gene ID" value="LAX5112_03931"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016779">
        <property type="term" value="F:nucleotidyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00692">
        <property type="entry name" value="SelO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003846">
        <property type="entry name" value="SelO"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32057">
        <property type="entry name" value="PTHR32057"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02696">
        <property type="entry name" value="SelO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8 9" id="KW-0460">Magnesium</keyword>
    <keyword evidence="5 9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4 9" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 9" id="KW-0808">Transferase</keyword>
    <feature type="active site" description="Proton acceptor" evidence="9">
        <location>
            <position position="253"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="91"/>
            <end position="94"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="114"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="126"/>
            <end position="127"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="177"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="184"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="254"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="263"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009747"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ74641.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="493" mass="53718" checksum="B37E96E884E8BD1F" modified="2015-12-09" version="1">MTTQPPAFQFDNTYARELPGFYVEWQGAAVPDPKLVLLNSPLAGELGLEPTALSAAEMAAVFAGSASPEGASPLAQVYAGHQFGGFSAQLGDGRALLIGEVIDQEGHRRDIQLKGSGRTPFSRGGDGKAVIGPVLREYILGEAMHALGVPTTRALAAVTTGEMIQREGLKPGAVLTRIASSHLRVGTFQFFAARSDTDKVRQLADYAIARHDPDLADADDRHLRFLARVVDRQAQLVSKWMLIGFVHGVMNTDNTTISGETIDYGPCAFLDGYDPAAVFSSIDHGGRYAFGRQPTIMQWNLARLAEALLPLFDPADLDRAVELATQELNKFPDHYRSAWLNGMSKKLGLTDVQDDDVTLFEDLLGAMAASGADYTLAFRRLSNAVSGNTAPLFDLFEDKAGISAWVIRWEQRRSSEGRPAEEISRGMNRVNPIYLPRNHKVEEALDASEAGDYHLVEELLDVLKDPYEERAGLEAYGTPAPQDFGPYQTFCGT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJJ3</accession>
    <name>A0A0M7AJJ3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">4-carboxymuconolactone decarboxylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03953</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74731.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673254.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03953"/>
    <dbReference type="EnsemblBacteria" id="CTQ74731">
        <property type="protein sequence ID" value="CTQ74731"/>
        <property type="gene ID" value="LAX5112_03953"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051920">
        <property type="term" value="F:peroxiredoxin activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1290.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029032">
        <property type="entry name" value="AhpD-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003779">
        <property type="entry name" value="CMD-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012788">
        <property type="entry name" value="Decarb_PcaC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02627">
        <property type="entry name" value="CMD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69118">
        <property type="entry name" value="SSF69118"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02425">
        <property type="entry name" value="decarb_PcaC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CMD" evidence="1">
        <location>
            <begin position="35"/>
            <end position="117"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02627"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74731.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="129" mass="14132" checksum="FF47B9159BCEA75E" modified="2015-12-09" version="1">MSDRYEQGLIVRRTVLGDAHVDRAEASKTDLDAPFQTLITEAAWGTVWASDGISPRERSMLTLALLAALGNFEEIAMHIRATARTGASKQDVLEAFQHVAIYAGVPRANQALKIAKDTYADMEREEAGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJX1</accession>
    <name>A0A0M7AJX1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Transcriptional regulatory protein OmpR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">ompR_1</name>
        <name evidence="6" type="ORF">LAX5112_04137</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75179.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040450897.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04137"/>
    <dbReference type="EnsemblBacteria" id="CTQ75179">
        <property type="protein sequence ID" value="CTQ75179"/>
        <property type="gene ID" value="LAX5112_04137"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00383">
        <property type="entry name" value="trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001867">
        <property type="entry name" value="OmpR/PhoB-type_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016032">
        <property type="entry name" value="Sig_transdc_resp-reg_C-effctor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039420">
        <property type="entry name" value="WalR-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48111">
        <property type="entry name" value="PTHR48111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00486">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00862">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46894">
        <property type="entry name" value="SSF46894"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51755">
        <property type="entry name" value="OMPR_PHOB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="4">
        <location>
            <begin position="12"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="domain" description="OmpR/PhoB-type" evidence="5">
        <location>
            <begin position="136"/>
            <end position="231"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="OmpR/PhoB-type" evidence="3">
        <location>
            <begin position="136"/>
            <end position="231"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="2">
        <location>
            <position position="61"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ75179.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="232" mass="25560" checksum="F1C6DCE2CC5A70E7" modified="2015-12-09" version="1">MTVTAPDDNAPHLLLVDDDSRIRDLLGRLLKDNGYRVSAAANAAEARICLSGLEFDLIILDVMMPGETGTELATSLRETSQVPILMLTARTDAPDRIAGLEAGVDDYLGKPFEPKELLLRIGAILRRGQYQPPTTVTEIRFGPFCYNTSRGELKNGDSSIRLTDREKQILSIFAEQPGATVPRHKIVGDDSGLGERTVDVQINRLRRKIEDDPGNPVYLQTVRGIGYRLACD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AK50</accession>
    <name>A0A0M7AK50_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Bifunctional protein PaaZ</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">paaZ_2</name>
        <name evidence="2" type="ORF">LAX5112_04164</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75259.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673415.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04164"/>
    <dbReference type="EnsemblBacteria" id="CTQ75259">
        <property type="protein sequence ID" value="CTQ75259"/>
        <property type="gene ID" value="LAX5112_04164"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029069">
        <property type="entry name" value="HotDog_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002539">
        <property type="entry name" value="MaoC-like_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01575">
        <property type="entry name" value="MaoC_dehydratas"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54637">
        <property type="entry name" value="SSF54637"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MaoC-like" evidence="1">
        <location>
            <begin position="10"/>
            <end position="124"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01575"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75259.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="159" mass="18043" checksum="832EA986570D9603" modified="2015-12-09" version="1">MTKYFEEIAIGETIELGTHTFKANDIIRFAEKYDPQPFHLSEEGAAKTHFGRLCASGWHTASVFMKLLVATNKRLIEAAQSEGRVPARVGPSPGFEKLKWIKPVFAGDTLTYQRVVTGKTESRSRPEWGIVHSDMIARNQNDEPVFSFKANVFVERRRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKP4</accession>
    <name>A0A0M7AKP4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04153</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75227.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673405.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75227">
        <property type="protein sequence ID" value="CTQ75227"/>
        <property type="gene ID" value="LAX5112_04153"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809562" evidence="1">
        <location>
            <begin position="21"/>
            <end position="189"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75227.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="189" mass="20113" checksum="B8081E0F7063055D" modified="2015-12-09" version="1">MKTFLKSAVFVLLATGAANANEFKAELEELANGQIAEIASSSEVIAAVKAQNTQTAGHDQAKIDELDKTWRAEAEAVDQPMIDAVLENDLSGYLADLQDGSDGLFTEIFVMDAKGLNVGQSDVTSDYWQGDEAKWQDTYGAGSGSVHISDLEEDESTQLLQSQVSVPVVDPDSGEPIGAVTFGVNVENL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKP8</accession>
    <name>A0A0M7AKP8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04089</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ75022.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673357.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04089"/>
    <dbReference type="EnsemblBacteria" id="CTQ75022">
        <property type="protein sequence ID" value="CTQ75022"/>
        <property type="gene ID" value="LAX5112_04089"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ75022.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="213" mass="24194" checksum="C5E1638425C1F4B3" modified="2015-12-09" version="1">MTASPAAHIPVFSAPTFKSFDPEDALMVDVIMPDHRAEPVLSDEELRRAEYERGLSEGDERTRHHYEALLQQERERHASDLEEERIRFEMRESANVAAAIDGFLEITEKRLSYSVSKLLMPFLKQSTIDQLVKAFAKQLTQLAEVPGGTSIRMRGPETLVAQVIQQLPDLKDHIQVQHADQVELEAFFDETVIETRLGAWLGQLDALQLEETV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AL46</accession>
    <name>A0A0M7AL46_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Ribosomal RNA small subunit methyltransferase B</fullName>
            <ecNumber evidence="6">2.1.1.176</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">rsmB_2</name>
        <name evidence="6" type="ORF">LAX5112_04047</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="4">Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.176" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ74940.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673336.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04047"/>
    <dbReference type="EnsemblBacteria" id="CTQ74940">
        <property type="protein sequence ID" value="CTQ74940"/>
        <property type="gene ID" value="LAX5112_04047"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0001510">
        <property type="term" value="P:RNA methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001678">
        <property type="entry name" value="MeTrfase_RsmB/NOP2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023267">
        <property type="entry name" value="RCMT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22807">
        <property type="entry name" value="PTHR22807"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01189">
        <property type="entry name" value="Methyltr_RsmB-F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR02008">
        <property type="entry name" value="RCMTFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51686">
        <property type="entry name" value="SAM_MT_RSMB_NOP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 4 6" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="3 4" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="2 4 6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="SAM_MT_RSMB_NOP" evidence="5">
        <location>
            <begin position="145"/>
            <end position="429"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="4">
        <location>
            <position position="360"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="263"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="307"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51686"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ74940.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="430" mass="47070" checksum="8F7AA5E291317901" modified="2015-12-09" version="1">MKDGGRLAAAIEVLDEVERRHRPVQVVLKEWGSSHRFAGSGDRTVIGNLVFDALRNRASLSAHMQDECPRALALATYVLTWDKGLEALNTALSDDRHAPEPLTETELARLAAPFTEEHQPWQAADVPEWLWPKFTAVFGGDAVTEGRALAQRAPVDMRVNTLKSDREKLLKKLGHTGAQGTGLSPHGMRIEAKPGLGRMPHVQAEEGYRKGWFDLQDEASQLAALLAGAQPGQQVLDYCAGGGGKTLALAAAMQNKGQLYAYDADRLRLAPIHERLQRAGVRNIQVRDPASSTLDDLKGQMDLVFIDAPCTGTGVWRRRPDSKWKLTAKALNDRMNDQVHVLDNAKEYVKVGGRLVYATCSLLPEENADQISRFLAANPDFAPVSALDAWTAMLPGKPVPTYVTERGDLTLTPASTKTDGFFIAILERTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALQ0</accession>
    <name>A0A0M7ALQ0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Cystine transporter subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_04244</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75461.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673479.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000021.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04244"/>
    <dbReference type="EnsemblBacteria" id="CTQ75461">
        <property type="protein sequence ID" value="CTQ75461"/>
        <property type="gene ID" value="LAX5112_04244"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00062">
        <property type="entry name" value="PBPb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="domain" description="PBPb" evidence="2">
        <location>
            <begin position="33"/>
            <end position="257"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00062"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ75461.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="258" mass="28840" checksum="B1F784D9DD6824E1" modified="2015-12-09" version="1">MKAVTRRTVLAGMAVLAPLPLLRLSRASSDLAGLQVMTEEYPPYNYQVGGELMGLSVEIMEEIFNRTASGHSRSDISLLPWARGYNLTLQRSGHALFSTTRTPDRESLFKWVGPFVPTVVGLIAKKSRNLNIQTVQDLADLRIGVVKDDIGQLLLQAKGVPDDRIEAVLSNDQNFRKLIAGRVDAISYETRVTRWALQTRDVALDEYETVYELDRGELYLALHHQTPDDLVGLLQSVFDTMVDDGTHAQILQRYGIKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALQ3</accession>
    <name>A0A0M7ALQ3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Endonuclease/Exonuclease/phosphatase family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_04130</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75160.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04130"/>
    <dbReference type="EnsemblBacteria" id="CTQ75160">
        <property type="protein sequence ID" value="CTQ75160"/>
        <property type="gene ID" value="LAX5112_04130"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004519">
        <property type="term" value="F:endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004527">
        <property type="term" value="F:exonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036691">
        <property type="entry name" value="Endo/exonu/phosph_ase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005135">
        <property type="entry name" value="Endo/exonuclease/phosphatase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03372">
        <property type="entry name" value="Exo_endo_phos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56219">
        <property type="entry name" value="SSF56219"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="3" id="KW-0269">Exonuclease</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0540">Nuclease</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="51"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="78"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="domain" description="Endo/exonuclease/phosphatase" evidence="2">
        <location>
            <begin position="137"/>
            <end position="350"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF03372"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ75160.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="365" mass="40529" checksum="8BCAF9AB98BF5C38" modified="2015-12-09" version="1">MFERVVKFGRPLLVLAAWCCGLGAVFAASLGLSSFFAPDYWLSDNMSFFLWQFLYGGIGGTLCAFAGFWFVRSFRGVYRSLVVIAAIATTALAVLTGFRTVENTVPLVASSGDTREIKIVSINLEALFLGDPVLTGYLKEADPDIIVFQETLWNLQKWRWHQRGLPIGGPDTSVYPEHLLVGDLGELVIFSRFPIEDTSSLIIPGVTPPGASVHYNADREILSFSINIEGQTVDLVSVHSDSPRTARRWQNKRAYFDKMDAVIAERLESDATPLIAIGDWNSAPWSARFQRSLEANDLATAYPDGIPQVTRYFFDYRLRWILGSPVDQVAVSKDIDIVDVSLGPHIGSDHRPLLVTLQLPEQAKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALU4</accession>
    <name>A0A0M7ALU4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04212</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75396.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673505.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000021.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75396">
        <property type="protein sequence ID" value="CTQ75396"/>
        <property type="gene ID" value="LAX5112_04212"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045615">
        <property type="entry name" value="DUF6447"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20045">
        <property type="entry name" value="DUF6447"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ75396.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="67" mass="7294" checksum="20D6FBDFF77C1454" modified="2015-12-09" version="1">MTEQPNGKVTIDGREFAVSDLSQDALNQLSSMTVVDRKIGELQQQIAIYQTARNAYAQALAAALPKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AM38</accession>
    <name>A0A0M7AM38_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Hydrogenase isoenzymes formation protein HypC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">hypC</name>
        <name evidence="2" type="ORF">LAX5112_04511</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the HupF/HypC family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000025">
        <property type="protein sequence ID" value="CTQ76195.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673710.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000025.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04511"/>
    <dbReference type="EnsemblBacteria" id="CTQ76195">
        <property type="protein sequence ID" value="CTQ76195"/>
        <property type="gene ID" value="LAX5112_04511"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019812">
        <property type="entry name" value="Hydgase_assmbl_chp_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001109">
        <property type="entry name" value="Hydrogenase_HupF/HypC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35177">
        <property type="entry name" value="PTHR35177"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01455">
        <property type="entry name" value="HupF_HypC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00445">
        <property type="entry name" value="HUPFHYPC"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00074">
        <property type="entry name" value="hypC_hupF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01097">
        <property type="entry name" value="HUPF_HYPC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006018"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76195.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="84" mass="8909" checksum="948602B781D27623" modified="2015-12-09" version="1">MCLAIPAKITELDGDDMAVVALEGIKKRISTALVEDLAVGDYVLVHVGYALHKVSPDEAARTLQLMAEAGVLQEELDEMTGAGQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AM66</accession>
    <name>A0A0M7AM66_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Leucine-responsive regulatory protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">lrp_9</name>
        <name evidence="5" type="ORF">LAX5112_04527</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000025">
        <property type="protein sequence ID" value="CTQ76225.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008196258.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000025.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04527"/>
    <dbReference type="EnsemblBacteria" id="CTQ76225">
        <property type="protein sequence ID" value="CTQ76225"/>
        <property type="gene ID" value="LAX5112_04527"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000485">
        <property type="entry name" value="AsnC-type_HTH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019888">
        <property type="entry name" value="Tscrpt_reg_AsnC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019887">
        <property type="entry name" value="Tscrpt_reg_AsnC/Lrp_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01037">
        <property type="entry name" value="AsnC_trans_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00033">
        <property type="entry name" value="HTHASNC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00344">
        <property type="entry name" value="HTH_ASNC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50956">
        <property type="entry name" value="HTH_ASNC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH asnC-type" evidence="4">
        <location>
            <begin position="7"/>
            <end position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50956"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ76225.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="159" mass="18065" checksum="869AC7FD6EA6AD51" modified="2015-12-09" version="1">MTEKNLLDPSDIRVLRVLQRDASLSIAEVAKEAGMSQTPCWRRIKRLKEQGIIKQITAIIDREAVGLGFVAYSFVKLAVPSRENMETFDKLVHHWPEVVICERITGAVDYLIKVVTDDIKTYDDFLRLKLLDNTLVSDVQSRIVVNTVKDTAALPLREN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AM69</accession>
    <name>A0A0M7AM69_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Putative hydrolase YxeP</fullName>
            <ecNumber evidence="1">3.-.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yxeP_2</name>
        <name evidence="1" type="ORF">LAX5112_04016</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.-.-.-" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74873.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74873">
        <property type="protein sequence ID" value="CTQ74873"/>
        <property type="gene ID" value="LAX5112_04016"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017439">
        <property type="entry name" value="Amidohydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036264">
        <property type="entry name" value="Bact_exopeptidase_dim_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002933">
        <property type="entry name" value="Peptidase_M20"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11014">
        <property type="entry name" value="PTHR11014"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01546">
        <property type="entry name" value="Peptidase_M20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005962">
        <property type="entry name" value="Pept_M20D_amidohydro"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55031">
        <property type="entry name" value="SSF55031"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01891">
        <property type="entry name" value="amidohydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ74873.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="384" mass="41960" checksum="6C836D08536DE345" modified="2015-12-09" version="1">MKFHLNQLIELRHWLHAHPEVSRQEAETAKYMRRFLTDYAAPDAFVPLSGAGFAAIYDGAKPGKTVMLRTELDALPIHEVNQDLPYRSVYDGVGHKCGHDGHMTIMAGVAQTLAKRPDSGRVVLLFQPDEETGTGARTCCVHPNFESIRPDFAFALHNLPGFAKGAVVCKSGTFASAVKYVAIKYAGKEAHSAQPETGASPSFAMAELTLKAREIEARYDNADTYALIVPIYTEMGVQSSGVCPGSGEVHYTLRAAGGDVVERMWQELSAAAEALAETYGLTLEFETREEFAANSNSQLAFDMIKRAATGANAEFALIDRPFRWGEDFGEITQRYEGGMFGLGAGENQPDLHNPDYDFPDDLIEPGVAMFSNLIRLALTEVAGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AM95</accession>
    <name>A0A0M7AM95_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04284</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000022">
        <property type="protein sequence ID" value="CTQ75562.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75562">
        <property type="protein sequence ID" value="CTQ75562"/>
        <property type="gene ID" value="LAX5112_04284"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75562.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="79" mass="9011" checksum="4E92F12A77A0065E" modified="2015-12-09" version="1">MRQVPRDGGGSSEERIRHTVKGQPATGRRYSSHLAGQVFTAQFQRKSVLMMHEHHQRRVPLILNDANPGEMHLQFVHTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AME5</accession>
    <name>A0A0M7AME5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Serralysin C</fullName>
            <ecNumber evidence="2">3.4.24.40</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">prtC_1</name>
        <name evidence="2" type="ORF">LAX5112_04214</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.4.24.40" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75400.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673454.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000021.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04214"/>
    <dbReference type="EnsemblBacteria" id="CTQ75400">
        <property type="protein sequence ID" value="CTQ75400"/>
        <property type="gene ID" value="LAX5112_04214"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005615">
        <property type="term" value="C:extracellular space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008237">
        <property type="term" value="F:metallopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.150.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.390.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043708">
        <property type="entry name" value="DUF5648"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024079">
        <property type="entry name" value="MetalloPept_cat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013858">
        <property type="entry name" value="Peptidase_M10B_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006026">
        <property type="entry name" value="Peptidase_Metallo"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011049">
        <property type="entry name" value="Serralysin-like_metalloprot_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18885">
        <property type="entry name" value="DUF5648"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08548">
        <property type="entry name" value="Peptidase_M10_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00235">
        <property type="entry name" value="ZnMc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51120">
        <property type="entry name" value="SSF51120"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ZnMc" evidence="1">
        <location>
            <begin position="27"/>
            <end position="180"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75400.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="526" mass="55764" checksum="BD3900504DB6C9F1" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AN93</accession>
    <name>A0A0M7AN93_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">L-fuconate dehydratase</fullName>
            <ecNumber evidence="2">4.2.1.68</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04646</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="4.2.1.68" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000027">
        <property type="protein sequence ID" value="CTQ76595.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673828.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000027.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04646"/>
    <dbReference type="EnsemblBacteria" id="CTQ76595">
        <property type="protein sequence ID" value="CTQ76595"/>
        <property type="gene ID" value="LAX5112_04646"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047808">
        <property type="term" value="F:D(-)-tartrate dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050023">
        <property type="term" value="F:L-fuconate dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.390.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034611">
        <property type="entry name" value="D-tartrate_dehydratase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036849">
        <property type="entry name" value="Enolase-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029017">
        <property type="entry name" value="Enolase-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029065">
        <property type="entry name" value="Enolase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013342">
        <property type="entry name" value="Mandelate_racemase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034593">
        <property type="entry name" value="Mandelate_racemase_DgoD-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48080">
        <property type="entry name" value="PTHR48080"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48080:SF5">
        <property type="entry name" value="PTHR48080:SF5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13378">
        <property type="entry name" value="MR_MLE_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDF00118">
        <property type="entry name" value="D-tartrate_dehydratase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00922">
        <property type="entry name" value="MR_MLE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51604">
        <property type="entry name" value="SSF51604"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54826">
        <property type="entry name" value="SSF54826"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MR_MLE" evidence="1">
        <location>
            <begin position="161"/>
            <end position="258"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00922"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76595.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="387" mass="43109" checksum="1E09A904AD7894C7" modified="2015-12-09" version="1">MRIVDIREVTKPISSPIRNAYIDFSKMTASLVAVITDVERNGRRVVGYGFNSNGRYGQGGLIRERFRSRILDADPKKLLNQAGSNFDPHAIWGTMMQNEKPGGHGERSVAVGTIDMAVWDAVAKIEDKPLFRLLADKKGLQADPKVFVYAAGGYYYPGKDDAALRAEMRSYVDRGYTVVKMKIGGASIEEDQRRIESVLNEINGDAQLAVDANGRFDLETAIAYAKMLRRYPLFWFEEIGDPLDYQLQAAMTEFYPAPMATGENLFSHLDARNLLRYGGMRPDRDWLQFDCALSYGLVEYLRTLDVLHEHGWSPTRCIPHGGHQMSLNIAAGLGLGGNESYPDLFQPYGGFPDGVDVIDGHIIMPELPGIGFEGKSDLITVMRDLAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANL2</accession>
    <name>A0A0M7ANL2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">L-ribulose-5-phosphate 4-epimerase</fullName>
            <ecNumber evidence="2">5.1.3.4</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">araD</name>
        <name evidence="2" type="ORF">LAX5112_04609</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="5.1.3.4" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000027">
        <property type="protein sequence ID" value="CTQ76489.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673796.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000027.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04609"/>
    <dbReference type="EnsemblBacteria" id="CTQ76489">
        <property type="protein sequence ID" value="CTQ76489"/>
        <property type="gene ID" value="LAX5112_04609"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008742">
        <property type="term" value="F:L-ribulose-phosphate 4-epimerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.225.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001303">
        <property type="entry name" value="Aldolase_II/adducin_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036409">
        <property type="entry name" value="Aldolase_II/adducin_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00596">
        <property type="entry name" value="Aldolase_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01007">
        <property type="entry name" value="Aldolase_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53639">
        <property type="entry name" value="SSF53639"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0413">Isomerase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aldolase_II" evidence="1">
        <location>
            <begin position="9"/>
            <end position="187"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM01007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76489.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="216" mass="23051" checksum="85C28A6780C49C93" modified="2015-12-09" version="1">MHDLTAKKDALIATAKRCFDLRLQTNAGGNLSVRLESADAIAIKPSGIGFNECTRDNLQVVHLDGTIEPSDHKPSKDLGFHLDLYRIRADIKAVVHCHSPWATGYASAGVEIPCLTVQTIEKIGRMPLIPLSPQGGPQTETEISPVFEDPKVVAAVLANHGTIGVGSSLMKAQYLAEIIEETAHIAFVRDAVMAAHGKKVADLPRFGTAADAKAAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANV7</accession>
    <name>A0A0M7ANV7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Oxygen-dependent coproporphyrinogen-III oxidase</fullName>
            <shortName evidence="5">CPO</shortName>
            <shortName evidence="5">Coprogen oxidase</shortName>
            <shortName evidence="5">Coproporphyrinogenase</shortName>
            <ecNumber evidence="5">1.3.3.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 7" type="primary">hemF</name>
        <name evidence="7" type="ORF">LAX5112_04179</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>coproporphyrinogen III + 2 H(+) + O2 = 2 CO2 + 2 H2O + protoporphyrinogen IX</text>
            <dbReference type="Rhea" id="RHEA:18257"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:57307"/>
            <dbReference type="ChEBI" id="CHEBI:57309"/>
            <dbReference type="EC" id="1.3.3.3"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="5">
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="5">Porphyrin-containing compound metabolism; protoporphyrin-IX biosynthesis; protoporphyrinogen-IX from coproporphyrinogen-III (O2 route): step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="1 5">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the aerobic coproporphyrinogen-III oxidase family.</text>
    </comment>
    <dbReference type="EC" id="1.3.3.3" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75304.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673423.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04179"/>
    <dbReference type="EnsemblBacteria" id="CTQ75304">
        <property type="protein sequence ID" value="CTQ75304"/>
        <property type="gene ID" value="LAX5112_04179"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00251">
        <property type="reaction ID" value="UER00322"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004109">
        <property type="term" value="F:coproporphyrinogen oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042803">
        <property type="term" value="F:protein homodimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006782">
        <property type="term" value="P:protoporphyrinogen IX biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1500.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00333">
        <property type="entry name" value="Coprogen_oxidas"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001260">
        <property type="entry name" value="Coprogen_oxidase_aer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036406">
        <property type="entry name" value="Coprogen_oxidase_aer_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018375">
        <property type="entry name" value="Coprogen_oxidase_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10755">
        <property type="entry name" value="PTHR10755"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01218">
        <property type="entry name" value="Coprogen_oxidas"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000166">
        <property type="entry name" value="Coproporphyri_ox"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00073">
        <property type="entry name" value="COPRGNOXDASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF102886">
        <property type="entry name" value="SSF102886"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01021">
        <property type="entry name" value="COPROGEN_OXIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 5" id="KW-0350">Heme biosynthesis</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2 5 7" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4 5" id="KW-0627">Porphyrin biosynthesis</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="50"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="5">
        <location>
            <begin position="142"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="region of interest" description="Important for dimerization" evidence="5">
        <location>
            <begin position="273"/>
            <end position="308"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="5">
        <location>
            <begin position="291"/>
            <end position="293"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="5">
        <location>
            <position position="140"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="126"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="130"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="140"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="178"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="208"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="site" description="Important for dimerization" evidence="5">
        <location>
            <position position="208"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023133"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00333"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ75304.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="308" mass="34500" checksum="7AA2019CCD9A605A" modified="2015-12-09" version="1">MTAPSPESRGGPIPEGIEDKKLTASAWFKDLRDQICAAFEKLEDDIGELNGPMSDLPAGRFKRTPWERTDSSGAKGGGGVMSMMHGRVFEKVGVHISTVHGEFSPEFRSQIPGASEDPRFWASGISLIAHPQNPNVPAVHMNTRMVVTTRQWFGGGADLTPVLDDRRTQDDPDTVAFHDAMKAACEPHAVADYPAYKDWCDEYFFLKHRNEPRGIGGIFYDYLHSGDWNADLAFTKDVGRAFLKVYPELVRKNYENSWTDAQREEQLIRRGRYVEYNLLYDRGTIFGLKTGGNVASILSSMPPVVKWP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7API9</accession>
    <name>A0A0M7API9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Putative HTH-type transcriptional regulator YdfH</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ydfH_7</name>
        <name evidence="5" type="ORF">LAX5112_04640</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000027">
        <property type="protein sequence ID" value="CTQ76577.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673825.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000027.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04640"/>
    <dbReference type="EnsemblBacteria" id="CTQ76577">
        <property type="protein sequence ID" value="CTQ76577"/>
        <property type="gene ID" value="LAX5112_04640"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07377">
        <property type="entry name" value="WHTH_GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.530">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011711">
        <property type="entry name" value="GntR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008920">
        <property type="entry name" value="TF_FadR/GntR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000524">
        <property type="entry name" value="Tscrpt_reg_HTH_GntR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07729">
        <property type="entry name" value="FCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00392">
        <property type="entry name" value="GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00895">
        <property type="entry name" value="FCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00345">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48008">
        <property type="entry name" value="SSF48008"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50949">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH gntR-type" evidence="4">
        <location>
            <begin position="23"/>
            <end position="90"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ76577.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="245" mass="26577" checksum="2A89473B41A606A3" modified="2015-12-09" version="1">MTISVTASDPSQTTLHEVFALPPGRTLEICLNIQAAILEHKLAPGVKLSEDEVGEIYGASRTVVRAALQALAHSGLISMIKNRGAYVAKPTIREAHEVFQARALIEPAVARLAADAITETQLADLKAHLDAEHAAIHAADMGRALMLSGSFHTAIAEIADHRIFTGMVRSLISRSSLIIALYWKRSDTACESHSHHALLDAFEKRDGAEAEQVQKSHIIDLHSGLDLRGEQVLNRSLRDALGPRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQI7</accession>
    <name>A0A0M7AQI7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">NAD(P)H azoreductase</fullName>
            <ecNumber evidence="2">1.7.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">azoB_2</name>
        <name evidence="2" type="ORF">LAX5112_04899</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.7.-.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000034">
        <property type="protein sequence ID" value="CTQ77405.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674042.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000034.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04899"/>
    <dbReference type="EnsemblBacteria" id="CTQ77405">
        <property type="protein sequence ID" value="CTQ77405"/>
        <property type="gene ID" value="LAX5112_04899"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008030">
        <property type="entry name" value="NmrA-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05368">
        <property type="entry name" value="NmrA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NmrA" evidence="1">
        <location>
            <begin position="106"/>
            <end position="203"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF05368"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77405.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="275" mass="29560" checksum="784426D8693B62E2" modified="2015-12-09" version="1">MTNHPILVIGATGKTGSRVVTKLEVKGLTVRRGTRVSAPPFDWEDQSTWPPILTGASKAYVTYFPDLAFPGAVEKLEAFAKVALETGLQHIVLLSGRGEHFASMGEEVIRNSGVPFTIVRSAWFAQNFSEGYLRDPILGGVLPMPGGDIAEPIIDIDDIADVVVAALTEEGHLGERYEVTGPRLMTFAEMADILSTTLGRPIQHIPIAFEDFHANVAASGGEFVADVFTQIARETLDGRNAYTADGVERALGRKPRDFAAFATTAMETGAWSVAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQS8</accession>
    <name>A0A0M7AQS8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">S-adenosyl-L-methionine-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_04774</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the tRNA methyltransferase O family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000030">
        <property type="protein sequence ID" value="CTQ77007.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04774"/>
    <dbReference type="EnsemblBacteria" id="CTQ77007">
        <property type="protein sequence ID" value="CTQ77007"/>
        <property type="gene ID" value="LAX5112_04774"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd09281">
        <property type="entry name" value="UPF0066"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.30.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023370">
        <property type="entry name" value="TrmO-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040372">
        <property type="entry name" value="YaeB-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036413">
        <property type="entry name" value="YaeB-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036414">
        <property type="entry name" value="YaeB_N_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12818">
        <property type="entry name" value="PTHR12818"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01980">
        <property type="entry name" value="TrmO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF118196">
        <property type="entry name" value="SSF118196"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00104">
        <property type="entry name" value="tRNA_TsaA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51668">
        <property type="entry name" value="TSAA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <feature type="domain" description="TsaA-like" evidence="3">
        <location>
            <begin position="42"/>
            <end position="173"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00033753"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51668"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ77007.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="176" mass="19835" checksum="8518917130E4557C" modified="2015-12-09" version="1">MTSLRWAASAGSLLEPNRQIFMTDIRPHEVFVPTTPPEDAQLRYIGRIHTPWTERKECPRRGDPENGPDCRIEVFEPWVPALKNIETFDSIEVLYWLDRARRDLVIQNPAHTGDVRGTFALRSPNRPNPIGTSLVKLISVNGPLLTVRGLDCLNGTPLIDLKPDRCAFTDKPRSGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQT4</accession>
    <name>A0A0M7AQT4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Aminotransferase</fullName>
            <ecNumber evidence="1">2.6.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_04732</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.6.1.-" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000029">
        <property type="protein sequence ID" value="CTQ76871.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673904.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000029.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04732"/>
    <dbReference type="EnsemblBacteria" id="CTQ76871">
        <property type="protein sequence ID" value="CTQ76871"/>
        <property type="gene ID" value="LAX5112_04732"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008483">
        <property type="term" value="F:transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901605">
        <property type="term" value="P:alpha-amino acid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009058">
        <property type="term" value="P:biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004839">
        <property type="entry name" value="Aminotransferase_I/II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004838">
        <property type="entry name" value="NHTrfase_class1_PyrdxlP-BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00155">
        <property type="entry name" value="Aminotran_1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00105">
        <property type="entry name" value="AA_TRANSFER_CLASS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 3" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Aminotran_1_2" evidence="2">
        <location>
            <begin position="32"/>
            <end position="391"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU000481"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ76871.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="399" mass="42916" checksum="539241CB26E559CB" modified="2015-12-09" version="1">MGFLADALARVQPSATIAVTNKARELKAAGRDVIGLGAGEPDFDTPENIKAAAIKAINDGKTKYTAVDGIPELKAAIAEKFKRENGLTYETNQITVGTGGKQVLYNALVATINPGDEVIIPTPYWVSYPDMVLLAGGEPVIVEADKSTFKITPEALDAAITSRTKWLIFNSPSNPSGAAYTEAELKALCNVLVKHPQVWIMTDDMYEHLVYDDFRFTTPAQVEPSLYERTLTVNGVSKAYSMTGWRIGYAGGPADLIKAMAKVQSQSTSNPNSIAQWAAVEAISGTQDFIPKNNEIFKARRDLVVSMLNQANGITCPVPEGAFYVFPSCAGTIGKTAPSGKVIENDEDFVTELLETEGVAVVHGSAFGLGPNFRISYATSTEALEEACTRIQRFCGNLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQV1</accession>
    <name>A0A0M7AQV1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">UPF0262 protein LAX5112_04498</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04498</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UPF0262 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000025">
        <property type="protein sequence ID" value="CTQ76173.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008197378.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000025.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04498"/>
    <dbReference type="EnsemblBacteria" id="CTQ76173">
        <property type="protein sequence ID" value="CTQ76173"/>
        <property type="gene ID" value="LAX5112_04498"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00678">
        <property type="entry name" value="UPF0262"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008321">
        <property type="entry name" value="UCP032146"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06793">
        <property type="entry name" value="UPF0262"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF032146">
        <property type="entry name" value="UCP032146"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00678"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76173.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="167" mass="18701" checksum="C492D91954C1C7A6" modified="2015-12-09" version="1">MSDAQSESSAQSAGGRLVDVVLDESSIARSTPEVEHDRAVAIYDLIEENCFQPVGHPVAKFVLNLSVIEKKLVFQILTEDEQPVVTHVLSLTPLRKIVKDYDLICDSYYEAIRHATPSQIEAIDMGRRGVHNEGSTILMERLHGKIEVDMATARRLFTLVYALHWKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARA2</accession>
    <name>A0A0M7ARA2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Beta-lactamase hydrolase-like protein</fullName>
            <ecNumber evidence="3">3.-.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">blh_2</name>
        <name evidence="3" type="ORF">LAX5112_04753</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.-.-.-" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000030">
        <property type="protein sequence ID" value="CTQ76946.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673919.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000030.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04753"/>
    <dbReference type="EnsemblBacteria" id="CTQ76946">
        <property type="protein sequence ID" value="CTQ76946"/>
        <property type="gene ID" value="LAX5112_04753"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.190.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005939">
        <property type="entry name" value="BLH_phosphatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023753">
        <property type="entry name" value="FAD/NAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029021">
        <property type="entry name" value="Prot-tyrosine_phosphatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015904">
        <property type="entry name" value="Sulphide_quinone_reductase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10632">
        <property type="entry name" value="PTHR10632"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04273">
        <property type="entry name" value="DUF442"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07992">
        <property type="entry name" value="Pyr_redox_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01244">
        <property type="entry name" value="TIGR01244"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF442" evidence="1">
        <location>
            <begin position="4"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="domain" description="Pyr_redox_2" evidence="2">
        <location>
            <begin position="151"/>
            <end position="282"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04273"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ76946.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="558" mass="60485" checksum="4C3D5F196C361764" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARH3</accession>
    <name>A0A0M7ARH3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">3-isopropylmalate dehydrogenase</fullName>
            <ecNumber evidence="2">1.1.1.85</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">leuB_2</name>
        <name evidence="2" type="ORF">LAX5112_04583</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.1.1.85" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000026">
        <property type="protein sequence ID" value="CTQ76403.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673772.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000026.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04583"/>
    <dbReference type="EnsemblBacteria" id="CTQ76403">
        <property type="protein sequence ID" value="CTQ76403"/>
        <property type="gene ID" value="LAX5112_04583"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003862">
        <property type="term" value="F:3-isopropylmalate dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019818">
        <property type="entry name" value="IsoCit/isopropylmalate_DH_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024084">
        <property type="entry name" value="IsoPropMal-DH-like_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00180">
        <property type="entry name" value="Iso_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01329">
        <property type="entry name" value="Iso_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00470">
        <property type="entry name" value="IDH_IMDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Iso_dh" evidence="1">
        <location>
            <begin position="2"/>
            <end position="355"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM01329"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76403.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="368" mass="39887" checksum="9B491E58ED052633" modified="2015-12-09" version="1">MKIALIRGDGIGIDVADAAMAVLEAALQKTGQPKPELDEIHAGAAYFQETGQDIEAAGEERAEAADAIFLGAIGLPSIRHADGTEISPHLRLRDRFGLYAGVRPVKAYPNAPQRLADPRAAEIDLIILRESTEGLFYSAAAHKRSLVVNDDEVQDILRITRKTTTKLHRFAFDLARKRQNKGFQGRLTCVDKANVFTSLAFFRQIFDEVKTDYPDVPIGYNYVDAQALDLVRKPWDFDVLVTENMFGDILSDLAGGLVGGMGMAACAEIGDHTGLFQPAHGSAPDIMGQDKANPLAAILSGALMLDYLAEKLGNPHLSDAADLINQAVDDGFRNNRLRPIEFGGDMGTRAITKAITDTVSESRQIAAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARS9</accession>
    <name>A0A0M7ARS9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">barA_4</name>
        <name evidence="11" type="ORF">LAX5112_04811</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000031">
        <property type="protein sequence ID" value="CTQ77126.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04811"/>
    <dbReference type="EnsemblBacteria" id="CTQ77126">
        <property type="protein sequence ID" value="CTQ77126"/>
        <property type="gene ID" value="LAX5112_04811"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00130">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000014">
        <property type="entry name" value="PAS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035965">
        <property type="entry name" value="PAS-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55785">
        <property type="entry name" value="SSF55785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00229">
        <property type="entry name" value="sensory_box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50112">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="11" id="KW-0418">Kinase</keyword>
    <keyword evidence="7" id="KW-0472">Membrane</keyword>
    <keyword evidence="3 4" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="11" id="KW-0808">Transferase</keyword>
    <keyword evidence="7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="86"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="114"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="domain" description="PAS" evidence="10">
        <location>
            <begin position="170"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="8">
        <location>
            <begin position="312"/>
            <end position="533"/>
        </location>
    </feature>
    <feature type="domain" description="Response regulatory" evidence="9">
        <location>
            <begin position="550"/>
            <end position="662"/>
        </location>
    </feature>
    <feature type="domain" description="Response regulatory" evidence="9">
        <location>
            <begin position="695"/>
            <end position="814"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="5">
        <location>
            <begin position="143"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="4">
        <location>
            <position position="598"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="4">
        <location>
            <position position="744"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50112"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ77126.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="820" mass="88349" checksum="6C1C9A38BA835356" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASI0</accession>
    <name>A0A0M7ASI0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Dimethlysulfonioproprionate lyase DddL</fullName>
            <ecNumber evidence="1">4.4.1.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">dddL</name>
        <name evidence="1" type="ORF">LAX5112_04976</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="4.4.1.3" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000037">
        <property type="protein sequence ID" value="CTQ77607.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04976"/>
    <dbReference type="EnsemblBacteria" id="CTQ77607">
        <property type="protein sequence ID" value="CTQ77607"/>
        <property type="gene ID" value="LAX5112_04976"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047869">
        <property type="term" value="F:dimethylpropiothetin dethiomethylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031723">
        <property type="entry name" value="DMSP_lyase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16867">
        <property type="entry name" value="DMSP_lyase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0456">Lyase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ77607.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="229" mass="25832" checksum="9F65B67F2D0B181D" modified="2015-12-09" version="1">MLEIEKSEPETLAHRRLSDYPDWGYLLREYYEAYRFLSSGGSDRIRAHQRAVREAISRVIKSNSELRFDAPAHKPVTAHLKRALDEGRLERTATLIRSIESVQDQLTWQYGYEKVPRGLDKKYAYAELCGPNGPILTTEVILGLVLFAPNCTYPAHSHDGISESYICLSGAVSENHQGVYAPGSMIFNPPEHAHRITVSKTEPALLAYAWTGPQDKLAGQKMVFSRKRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AST7</accession>
    <name>A0A0M7AST7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04957</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000037">
        <property type="protein sequence ID" value="CTQ77571.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77571">
        <property type="protein sequence ID" value="CTQ77571"/>
        <property type="gene ID" value="LAX5112_04957"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ77571.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="53" mass="5638" checksum="F51B173E3F514B01" modified="2015-12-09" version="1">MQGTLCFCPCISHSGLSDGQRDGGSGGHVETAGEVILYELHLKIVRVPNRDAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AT98</accession>
    <name>A0A0M7AT98_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Sigma factor SigB regulation protein RsbQ</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">rsbQ</name>
        <name evidence="2" type="ORF">LAX5112_05011</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000040">
        <property type="protein sequence ID" value="CTQ77682.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674136.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000040.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77682">
        <property type="protein sequence ID" value="CTQ77682"/>
        <property type="gene ID" value="LAX5112_05011"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000073">
        <property type="entry name" value="AB_hydrolase_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12697">
        <property type="entry name" value="Abhydrolase_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AB hydrolase-1" evidence="1">
        <location>
            <begin position="23"/>
            <end position="261"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12697"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77682.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="270" mass="29553" checksum="4D7C05A47102A9ED" modified="2015-12-09" version="1">MLTEDDIVRRNNVRITGSGGSTLVLAHGFGCDQNMWRFVEGDLAKNHRVVLFDYCGSGQSDVSFYDRDRYASLDGYAEDVVEIHDALGLQDTVLIGHSVSSIIGLLASISRPELISKLVMVCPSPCFLNDPPGYHGGFERADLEELISLMDKNYIGWAGYLAPLVMGQTNPDDLVQELNDSFCSTDPVLAKNFAMATFFADNRQDLSRSKAPALVLQSARDSLAAPEIGAFIQQNMPDAVLRIVEADGHCLHMTHPRDVVREVTAFVSAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZM20</accession>
    <name>A0A0M6ZM20_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00075</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63815.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ63815">
        <property type="protein sequence ID" value="CTQ63815"/>
        <property type="gene ID" value="LAX5112_00075"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005808841" evidence="1">
        <location>
            <begin position="34"/>
            <end position="225"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ63815.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="225" mass="23881" checksum="7856B92DE89A1BE8" modified="2015-12-09" version="1">MKTAFGIFSLYPKSLAAGLAAAGIVASSGAGFAEPLALVLDKSKAVAFPAFSELSAGDVVELGNSGHIDLLDYSACREVRITAGRVVFTSTGYEVDGGEEKELRAGNCLQAESGTDPDTADKGLTVTLRSIKAANKTAASLMLRFDDQLKTEYDSVFVSFEGGEPKRFELGENVLTDMPVRDEETDKIDVQLFLQSSTADGEVVIREFTIDPATVGRKTAVVVVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZN08</accession>
    <name>A0A0M6ZN08_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 6">Triosephosphate isomerase</fullName>
            <shortName evidence="5">TIM</shortName>
            <shortName evidence="5">TPI</shortName>
            <ecNumber evidence="5 6">5.3.1.1</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Triose-phosphate isomerase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5 7" type="primary">tpiA</name>
        <name evidence="7" type="ORF">LAX5112_00201</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5 6">
            <text>D-glyceraldehyde 3-phosphate = dihydroxyacetone phosphate</text>
            <dbReference type="Rhea" id="RHEA:18585"/>
            <dbReference type="ChEBI" id="CHEBI:57642"/>
            <dbReference type="ChEBI" id="CHEBI:59776"/>
            <dbReference type="EC" id="5.3.1.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>L-erythrulose 1-phosphate = D-erythrulose 4-phosphate</text>
            <dbReference type="Rhea" id="RHEA:49588"/>
            <dbReference type="ChEBI" id="CHEBI:58002"/>
            <dbReference type="ChEBI" id="CHEBI:90796"/>
            <dbReference type="EC" id="5.3.1.33"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="5 6">Carbohydrate biosynthesis; gluconeogenesis.</text>
    </comment>
    <comment type="pathway">
        <text evidence="5 6">Carbohydrate degradation; glycolysis; D-glyceraldehyde 3-phosphate from glycerone phosphate: step 1/1.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2">Carbohydrate metabolism; erythritol degradation.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5 6">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5 6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5 6">Belongs to the triosephosphate isomerase family.</text>
    </comment>
    <dbReference type="EC" id="5.3.1.1" evidence="5 6"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64165.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670202.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00201"/>
    <dbReference type="EnsemblBacteria" id="CTQ64165">
        <property type="protein sequence ID" value="CTQ64165"/>
        <property type="gene ID" value="LAX5112_00201"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00109">
        <property type="reaction ID" value="UER00189"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00138"/>
    <dbReference type="UniPathway" id="UPA01066"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004807">
        <property type="term" value="F:triose-phosphate isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006094">
        <property type="term" value="P:gluconeogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006096">
        <property type="term" value="P:glycolytic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00311">
        <property type="entry name" value="TIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00147_B">
        <property type="entry name" value="TIM_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035990">
        <property type="entry name" value="TIM_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022896">
        <property type="entry name" value="TrioseP_Isoase_bac/euk"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000652">
        <property type="entry name" value="Triosephosphate_isomerase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020861">
        <property type="entry name" value="Triosephosphate_isomerase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21139">
        <property type="entry name" value="PTHR21139"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00121">
        <property type="entry name" value="TIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51351">
        <property type="entry name" value="SSF51351"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00419">
        <property type="entry name" value="tim"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00171">
        <property type="entry name" value="TIM_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51440">
        <property type="entry name" value="TIM_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 5 6" id="KW-0312">Gluconeogenesis</keyword>
    <keyword evidence="5 6" id="KW-0324">Glycolysis</keyword>
    <keyword evidence="4 5 6" id="KW-0413">Isomerase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Substrate binding" evidence="5">
        <location>
            <begin position="12"/>
            <end position="14"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="5">
        <location>
            <begin position="235"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="active site" description="Electrophile" evidence="5">
        <location>
            <position position="99"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="5">
        <location>
            <position position="169"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="175"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="214"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000148"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004939"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00147"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU363013"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ64165.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="252" mass="25592" checksum="C2F26B1C68CA1C7D" modified="2015-12-09" version="1">MSTPIKPMVAGNWKMNGLKAGQAELHKMLAGISDDLADRVDVMICPPATLTASFSEKVTGNVMAIGAQDCHAAASGAHTGDLSAGMIADAGAKAVIVGHSERRTDHGETDADVNAKAQAAWSAGLVAIICVGETEAERKAGEAVAVVERQLAGSVPDGATAQNTVIAYEPVWAIGTGLTPTAGDVAEMHEAMRVDLAKRLGAEGSAMRLLYGGSVKPGNAAELMAVDNVDGALVGGASLKADDFLGILAAYQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZN34</accession>
    <name>A0A0M6ZN34_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Cystine transporter subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_00015</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63641.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670081.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00015"/>
    <dbReference type="EnsemblBacteria" id="CTQ63641">
        <property type="protein sequence ID" value="CTQ63641"/>
        <property type="gene ID" value="LAX5112_00015"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00062">
        <property type="entry name" value="PBPb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="domain" description="PBPb" evidence="2">
        <location>
            <begin position="28"/>
            <end position="255"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00062"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ63641.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="261" mass="29200" checksum="FF61D4A6A9ACA689" modified="2015-12-09" version="1">MVTGFLFRRFVLSAAVLLTLILSAAATPLQLVTLQYPPYEYQDGDKVDGIVVRLLHHAFEKLGRDIEITVLPWKRAQLMAKKGQVDGIFTVYETPERLKYLDYSKKVLIPQTVSLWALRETDVSYDGSMESLADVSIGLALGVSYGEKADRALKSGALKHLEYAPDSAQNIKKLLAGRTSVVIMNRYGALHHLHLQDGFERVKELTPEISSVPSYVAFSKARNHTALRNQFDQVLEAMIASGDYTRIIDGYFAEKSAKTEF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZNE6</accession>
    <name>A0A0M6ZNE6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative isomerase YddE</fullName>
            <ecNumber evidence="3">5.1.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">yddE</name>
        <name evidence="3" type="ORF">LAX5112_00100</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the PhzF family.</text>
    </comment>
    <dbReference type="EC" id="5.1.-.-" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63877.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670137.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00100"/>
    <dbReference type="EnsemblBacteria" id="CTQ63877">
        <property type="protein sequence ID" value="CTQ63877"/>
        <property type="gene ID" value="LAX5112_00100"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009058">
        <property type="term" value="P:biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003719">
        <property type="entry name" value="Phenazine_PhzF"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13774">
        <property type="entry name" value="PTHR13774"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02567">
        <property type="entry name" value="PhzC-PhzF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF016184">
        <property type="entry name" value="PhzC_PhzF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00654">
        <property type="entry name" value="PhzF_family"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0413">Isomerase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" evidence="2">
        <location>
            <position position="44"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008270"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR016184-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ63877.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="283" mass="30314" checksum="45E1E77B4F7FD0BF" modified="2015-12-09" version="1">MDIQRISAFSDGDTGGNPAGVLISDAHPSVEDMRTIAADVGFSETAFAEPQGNGAWRVRYFSPQSEVPFCGHATIALGSALTREFGPGRYNLKLNEAEISVEGAVSGKLVEAALQSPPTRSQPAPDDVVSEVLDLFGYTKDQIDPRIPPALVHGGADHFALTLNSREAVSGMTYDQETGRKLMEERGWVTILIAYSETPRLFHTRNAFASGGVYEDPATGAASAAYAGYLRDIGWPHDGRIEINQGFDMGNPSRIVAEIGSEKGSSIRVSGTARVMNESDFTD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPC1</accession>
    <name>A0A0M6ZPC1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00335</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64605.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ64605">
        <property type="protein sequence ID" value="CTQ64605"/>
        <property type="gene ID" value="LAX5112_00335"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021830">
        <property type="entry name" value="DUF3422"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11902">
        <property type="entry name" value="DUF3422"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="369"/>
            <end position="390"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="402"/>
            <end position="422"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64605.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="437" mass="48831" checksum="27FBCC8D172F53FE" modified="2015-12-09" version="1">MEKNLETGGALPTFRASPLRQRVLGEVHARPFRPLLTPRTVLHYAFLTNSDEAISDKEWLKEFCTSRGVAGPADGARYHTLEFGEGHLSWEQHAEFTTYTWNGSADLDHLFGAPPAGHPFGAAFRAPGELLVAVRLELRDEIDESRWRPTFEEGSLTVSSLERGQATVATDFRQDGDGLSRFLVLNHSMSDVQTGAIVQRLLELETYRTLAMLGLFEANTLSPDIRKFEIELAALTEQMKTATGLDSNRNLLNKFTELAASLEAGATASTFRFGASRAYYEIVKIRLSALQEEAMPGELTMSSFLSRRLSPAMRTCQAIEDRQAMLSRKLARATNLLRTRVDVDLEQQNRSLLESMNRRARLQLRLQQTVEGLSVAAVSYYIVGLFSYLAKGASGYGLPLPQPSVTMAIAVPVVVLFIWWTVRRIRAHHVKQDKDDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPD9</accession>
    <name>A0A0M6ZPD9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Putative glutamate--cysteine ligase 2</fullName>
            <ecNumber evidence="2">6.3.2.2</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="2">Gamma-glutamylcysteine synthetase 2</fullName>
            <shortName evidence="2">GCS 2</shortName>
            <shortName evidence="2">Gamma-GCS 2</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ybdK</name>
        <name evidence="3" type="ORF">LAX5112_00140</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 2">
            <text>ATP + L-cysteine + L-glutamate = ADP + gamma-L-glutamyl-L-cysteine + H(+) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:13285"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:35235"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58173"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.2.2"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily.</text>
    </comment>
    <dbReference type="EC" id="6.3.2.2" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63990.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670164.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00140"/>
    <dbReference type="EnsemblBacteria" id="CTQ63990">
        <property type="protein sequence ID" value="CTQ63990"/>
        <property type="gene ID" value="LAX5112_00140"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004357">
        <property type="term" value="F:glutamate-cysteine ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042398">
        <property type="term" value="P:cellular modified amino acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01609">
        <property type="entry name" value="Glu_cys_ligase_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006336">
        <property type="entry name" value="GCS2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014746">
        <property type="entry name" value="Gln_synth/guanido_kin_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011793">
        <property type="entry name" value="YbdK"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04107">
        <property type="entry name" value="GCS2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55931">
        <property type="entry name" value="SSF55931"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02050">
        <property type="entry name" value="gshA_cyan_rel"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 3" id="KW-0436">Ligase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00029283"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01609"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ63990.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="386" mass="43450" checksum="D5F065974CCA9EC7" modified="2015-12-09" version="1">MKEPSFSIGVEEEYLLVDRASRKIASSPPSELFSACETALEGRVSPEFLQCQIEVGTPVCMTLGEVKAELAYFRKTIADEAARHGLAPIAASTHPFAEWTEQPHTDKERYNDLARVMQVVAKRLLICGMHVHIGIEDAELRVDLFNQLTYFLPHLLALSTSSPFWRGRNTGLKSYRLSVFNELPRTGLPPRFESHEDYRHTIDMLVQAGVIEDATKIWWDLRPSDRFPTLEMRVTDVCPCVEDAVAIAALFRCLCRMLYRLRRANQGWRHYSRFLLAENRWQAQRHGSAANLIDFGQKKSIAFKDLVDEISELVAPDAAFFGCEAEIAHIRTIAERGTSADRQLALAGTMTQDNLIDRTKLEAVVDQLVHETQHGLAEAPASAKVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSX8</accession>
    <name>A0A0M6ZSX8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Phenylacetate-coenzyme A ligase</fullName>
            <ecNumber evidence="1">6.2.1.30</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="1">Phenylacetyl-CoA ligase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5" type="primary">paaK</name>
        <name evidence="5" type="ORF">LAX5112_00792</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>2-phenylacetate + ATP + CoA = AMP + diphosphate + phenylacetyl-CoA</text>
            <dbReference type="Rhea" id="RHEA:20956"/>
            <dbReference type="ChEBI" id="CHEBI:18401"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57390"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.2.1.30"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1">Aromatic compound metabolism; phenylacetate degradation.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the phenylacetyl-CoA ligase family.</text>
    </comment>
    <dbReference type="EC" id="6.2.1.30" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65889.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670711.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00792"/>
    <dbReference type="EnsemblBacteria" id="CTQ65889">
        <property type="protein sequence ID" value="CTQ65889"/>
        <property type="gene ID" value="LAX5112_00792"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00930"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047475">
        <property type="term" value="F:phenylacetate-CoA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010124">
        <property type="term" value="P:phenylacetate catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd05913">
        <property type="entry name" value="PaaK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12780">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045851">
        <property type="entry name" value="AMP-bd_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028154">
        <property type="entry name" value="AMP-dep_Lig_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000873">
        <property type="entry name" value="AMP-dep_Synth/Lig"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042099">
        <property type="entry name" value="ANL_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011880">
        <property type="entry name" value="PA_CoA_ligase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00501">
        <property type="entry name" value="AMP-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14535">
        <property type="entry name" value="AMP-binding_C_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006444">
        <property type="entry name" value="PaaK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02155">
        <property type="entry name" value="PA_CoA_ligase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 5" id="KW-0436">Ligase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AMP-binding" evidence="3">
        <location>
            <begin position="86"/>
            <end position="293"/>
        </location>
    </feature>
    <feature type="domain" description="AMP-binding_C_2" evidence="4">
        <location>
            <begin position="339"/>
            <end position="433"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="409"/>
            <end position="436"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="414"/>
            <end position="436"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRNR" id="PIRNR006444"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF14535"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ65889.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="436" mass="48536" checksum="123B886BAFB06539" modified="2015-12-09" version="1">MIDLTPDRATLDPIEIASRDEIAALQEKRLAWTLSHAYDNSSFFKKRFDEHGAHPGDFKSLADMAKFPFTVKQDLRDTYPFGMFATPREDLVRIHGSSGTTGKPTVVGYTANDISNWSDLIARSIRAAGGRKGNILHNAYGYGLFTGGLGAHYGAEKLGCTVVPISGGMTERQVTLIEDFKPDVIMVTPSYMLSILDEYRRRGLDARQSSLKVGIFGAEPWTNAMRQEIEQAFDMHAVDIYGLSEIMGPGVAQECVETKDGLHVWEDHFYPEIIDPVTEEGLPDGEMGELVFTTLTKEGLPMVRYRTRDLTRILPGTARSMRRIEKITGRSDDMIILRGVNVFPTQIEEQILKCEGLAAHFHIELVRSGRMDAMIVHGEAMPDASSSEAREASAKELAHHIKSTIGISSKIEIHEPEQLQRSEGKAKRVVDNRSKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSX9</accession>
    <name>A0A0M6ZSX9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">NAD dependent epimerase/dehydratase family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_00588</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the NAD(P)-dependent epimerase/dehydratase family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65326.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670517.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00588"/>
    <dbReference type="EnsemblBacteria" id="CTQ65326">
        <property type="protein sequence ID" value="CTQ65326"/>
        <property type="gene ID" value="LAX5112_00588"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001509">
        <property type="entry name" value="Epimerase_deHydtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01370">
        <property type="entry name" value="Epimerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Epimerase" evidence="2">
        <location>
            <begin position="97"/>
            <end position="207"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007637"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ65326.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="286" mass="31286" checksum="943E3C3B44105F5C" modified="2015-12-09" version="1">MRLFVFGFGYSSKAIIEEVRDRFDWIGGTTRSAEKAGALRENGIEPFIFDGETPGDGIADALSTATHVLVSIAPNDAGDPVLNQHGADIAAASPKWVGYLSTVGVYGNHDGAWVDETTVCKPVSKRSVQRVAAEEAWLAFAEQNSVPVQIFRLSGIYGPGRNTFENFKKGRARRLIKPGQVFNRIHVADIAGAVSIAMQSPETRVFNVTDDQPAPPQDVVTYAAELLGVTPPPEVPFETADLTPMARSFYGENKRVSNQRVKDELGYTFRYPDYRIALNTLAQDYG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTG7</accession>
    <name>A0A0M6ZTG7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">LAX5112_00690</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65597.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670632.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00690"/>
    <dbReference type="EnsemblBacteria" id="CTQ65597">
        <property type="protein sequence ID" value="CTQ65597"/>
        <property type="gene ID" value="LAX5112_00690"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006260">
        <property type="entry name" value="TonB/TolA_C"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01352">
        <property type="entry name" value="tonB_Cterm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="5">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809065" evidence="5">
        <location>
            <begin position="25"/>
            <end position="365"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="147"/>
            <end position="277"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="220"/>
            <end position="242"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ65597.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="365" mass="37995" checksum="49FDC0C0B4F8FD13" modified="2015-12-09" version="1">MSSFRNALGIAICASLAIHVGAVALTLNPKPELEVSGGGETITITLGSAPVSTISAGSKPQVETTLPAEPAVEKAAPVQPVPVSEVVQPPEPVSVPKIEPAPPVDSVPAVEAVPIAKVNGNFQATTEQKPVAEITEAPVPEKSLADAVDTEVEPPQNHVATVPKDPVKAVPVNDPQITKEVDPVPEVVTPAELAKPVEPSETVVSTPRRKPSLPKSQVAEAQKRPEKQAAKKPAKVKQEKAQTARRAGAGGQSKRTAQKGGSARKGKAKAAGNSEVTNYPAKVHRKVLRSVRTPRSLGRLAKDAQVRFTVTANGGVSGVRLIRSSGNKAFDQAALKSVQRAAPYPAIPAAAKRVSWTFTLPIGAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTH8</accession>
    <name>A0A0M6ZTH8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">RutC family protein YjgH</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yjgH</name>
        <name evidence="1" type="ORF">LAX5112_00677</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65562.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670622.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00677"/>
    <dbReference type="EnsemblBacteria" id="CTQ65562">
        <property type="protein sequence ID" value="CTQ65562"/>
        <property type="gene ID" value="LAX5112_00677"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035959">
        <property type="entry name" value="RutC-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006175">
        <property type="entry name" value="YjgF/YER057c/UK114"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11803">
        <property type="entry name" value="PTHR11803"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01042">
        <property type="entry name" value="Ribonuc_L-PSP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55298">
        <property type="entry name" value="SSF55298"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ65562.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="128" mass="14028" checksum="83EC21760552927F" modified="2015-12-09" version="1">MKTTHTPPDIRRPFARYSHAVEVPSGQRVLFASGQLGIDADDQIPSDVEGQTAHCFENIRAILASAGMTLTDIVRINAYVTGREHLPGYMKTRDQFITDPPPASTLMIVSGFAREEFVVEIEVIAAAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUF8</accession>
    <name>A0A0M6ZUF8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 8">Methionyl-tRNA formyltransferase</fullName>
            <ecNumber evidence="4 8">2.1.2.9</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8 11" type="primary">fmt</name>
        <name evidence="11" type="ORF">LAX5112_00529</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2 8">Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 8">
            <text>(6S)-10-formyltetrahydrofolate + L-methionyl-tRNA(fMet) = (6S)-5,6,7,8-tetrahydrofolate + H(+) + N-formyl-L-methionyl-tRNA(fMet)</text>
            <dbReference type="Rhea" id="RHEA:24380"/>
            <dbReference type="Rhea" id="RHEA-COMP:9952"/>
            <dbReference type="Rhea" id="RHEA-COMP:9953"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57453"/>
            <dbReference type="ChEBI" id="CHEBI:57454"/>
            <dbReference type="ChEBI" id="CHEBI:78530"/>
            <dbReference type="ChEBI" id="CHEBI:78844"/>
            <dbReference type="EC" id="2.1.2.9"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="3 8">Belongs to the Fmt family.</text>
    </comment>
    <dbReference type="EC" id="2.1.2.9" evidence="4 8"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65154.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670473.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00529"/>
    <dbReference type="EnsemblBacteria" id="CTQ65154">
        <property type="protein sequence ID" value="CTQ65154"/>
        <property type="gene ID" value="LAX5112_00529"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004479">
        <property type="term" value="F:methionyl-tRNA formyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd08646">
        <property type="entry name" value="FMT_core_Met-tRNA-FMT_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd08704">
        <property type="entry name" value="Met_tRNA_FMT_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.25.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00182">
        <property type="entry name" value="Formyl_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005794">
        <property type="entry name" value="Fmt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005793">
        <property type="entry name" value="Formyl_trans_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037022">
        <property type="entry name" value="Formyl_trans_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002376">
        <property type="entry name" value="Formyl_transf_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036477">
        <property type="entry name" value="Formyl_transf_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011034">
        <property type="entry name" value="Formyl_transferase-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044135">
        <property type="entry name" value="Met-tRNA-FMT_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041711">
        <property type="entry name" value="Met-tRNA-FMT_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02911">
        <property type="entry name" value="Formyl_trans_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00551">
        <property type="entry name" value="Formyl_trans_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50486">
        <property type="entry name" value="SSF50486"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53328">
        <property type="entry name" value="SSF53328"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00460">
        <property type="entry name" value="fmt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 8" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 8 11" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Formyl_trans_N" evidence="9">
        <location>
            <begin position="4"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="domain" description="Formyl_trans_C" evidence="10">
        <location>
            <begin position="205"/>
            <end position="303"/>
        </location>
    </feature>
    <feature type="region of interest" description="Tetrahydrofolate (THF) binding" evidence="8">
        <location>
            <begin position="111"/>
            <end position="114"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00002606"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010699"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012261"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00016014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00182"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF00551"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF02911"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ65154.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="312" mass="32814" checksum="70E5C392E223E8C4" modified="2015-12-09" version="1">MSLRVVFMGTPDFSVPTLMEIVGQGHEVVACYSQPPRPAGRGMDLKKSPVHEAAESFGIPVFTPTSLKSPEDQAQFAALDADVAVVVAYGLLLPKAILEAPEQGCLNLHASMLPRWRGAAPINRAIMAGDKETAVQVMRMEEGLDTGPVCMSETLAISENMTAGELHDQLSSLGGDLMVRALAALSRSALGEQVQSEEGVTYAAKLSKQETRIEWSLSAENVHNHIRGLSPFPGAWCEMELGGKTERVKILRSSLANGNGDAGSVLAVDGAPVVACGAGAVSLDQVQRAGKKPMTGEDFLRGAALSVGAHVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUQ7</accession>
    <name>A0A0M6ZUQ7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Carbon monoxide dehydrogenase medium chain</fullName>
            <ecNumber evidence="3">1.2.99.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">coxM</name>
        <name evidence="3" type="ORF">LAX5112_00817</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.2.99.2" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65956.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670846.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00817"/>
    <dbReference type="EnsemblBacteria" id="CTQ65956">
        <property type="protein sequence ID" value="CTQ65956"/>
        <property type="gene ID" value="LAX5112_00817"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071949">
        <property type="term" value="F:FAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.43.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.465.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005107">
        <property type="entry name" value="CO_DH_flav_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036683">
        <property type="entry name" value="CO_DH_flav_C_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016166">
        <property type="entry name" value="FAD-bd_PCMH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036318">
        <property type="entry name" value="FAD-bd_PCMH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016167">
        <property type="entry name" value="FAD-bd_PCMH_sub1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016169">
        <property type="entry name" value="FAD-bd_PCMH_sub2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002346">
        <property type="entry name" value="Mopterin_DH_FAD-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03450">
        <property type="entry name" value="CO_deh_flav_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00941">
        <property type="entry name" value="FAD_binding_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01092">
        <property type="entry name" value="CO_deh_flav_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55447">
        <property type="entry name" value="SSF55447"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56176">
        <property type="entry name" value="SSF56176"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51387">
        <property type="entry name" value="FAD_PCMH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0274">FAD</keyword>
    <keyword evidence="1" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FAD-binding PCMH-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="177"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51387"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ65956.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="288" mass="30134" checksum="981867A25E4473A8" modified="2015-12-09" version="1">MIPGEFTYHRPATVKEAVAILAEHGDEARPLSGGHSLIPMMKLRMAAPEHLIDLAGVESLKGISEDGGTIIIGAMTTQHEMISSDLLAAKLPIIRETSLLIADPQIRYLGTLGGNVANGDPGNDMPALMQCLNASYILSGPDGDREVAAREFYEAAYFTALAPEEILTAVRIPTPATGHGYAYEKLKRKVGDYATAAAAVLLTMNGGTVASCSIALTNVADTPLFAAEASEILTGSALDPETVKEAVAAAEAITEPASDGRGPAEYRTKMAGVMLERALARAAERASS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZV40</accession>
    <name>A0A0M6ZV40_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">NAD-reducing hydrogenase HoxS subunit gamma</fullName>
            <ecNumber evidence="6">1.12.1.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">hoxU</name>
        <name evidence="6" type="ORF">LAX5112_00894</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <dbReference type="EC" id="1.12.1.2" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66167.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008190432.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00894"/>
    <dbReference type="EnsemblBacteria" id="CTQ66167">
        <property type="protein sequence ID" value="CTQ66167"/>
        <property type="gene ID" value="LAX5112_00894"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047985">
        <property type="term" value="F:hydrogen dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008137">
        <property type="term" value="F:NADH dehydrogenase (ubiquinone) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042773">
        <property type="term" value="P:ATP synthesis coupled electron transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00207">
        <property type="entry name" value="fer2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036010">
        <property type="entry name" value="2Fe-2S_ferredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001041">
        <property type="entry name" value="2Fe-2S_ferredoxin-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017896">
        <property type="entry name" value="4Fe4S_Fe-S-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016214">
        <property type="entry name" value="NAD-red_Hydgase_HoxS_gsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000283">
        <property type="entry name" value="NADH_UbQ_OxRdtase_75kDa_su_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019574">
        <property type="entry name" value="NADH_UbQ_OxRdtase_Gsu_4Fe4S-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10588">
        <property type="entry name" value="NADH-G_4Fe-4S_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000309">
        <property type="entry name" value="NAD_red_hyd_HoxU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00929">
        <property type="entry name" value="NADH-G_4Fe-4S_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54292">
        <property type="entry name" value="SSF54292"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51085">
        <property type="entry name" value="2FE2S_FER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51379">
        <property type="entry name" value="4FE4S_FER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51839">
        <property type="entry name" value="4FE4S_HC3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00641">
        <property type="entry name" value="COMPLEX1_75K_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00642">
        <property type="entry name" value="COMPLEX1_75K_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="6" id="KW-0371">Homeobox</keyword>
    <keyword evidence="2" id="KW-0408">Iron</keyword>
    <keyword evidence="2" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="2Fe-2S ferredoxin-type" evidence="3">
        <location>
            <begin position="8"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="domain" description="4Fe-4S His(Cys)3-ligated-type" evidence="5">
        <location>
            <begin position="84"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="4">
        <location>
            <begin position="144"/>
            <end position="162"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51379"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51839"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ66167.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="242" mass="26230" checksum="6ADF85A3708040B2" modified="2015-12-09" version="1">MSGTKKETGFSFTIDGIEVTAYAGQTIMEAADDAGIYIPRLCDHEGLRHQGSCRVCTVKAGGRSVSACTQPAAPGQAVENETPHLNKMRRDLVEMLFHEGNHLCPICEASGNCELQAMAYRLDMTEATKFPYLEPCRALDASHPDIALDTNRCISCGRCIRASQDVDGKGVFGYVGRGIHRRVAVNGENLADTDAAVTDNAISAEVCPVGCIIRKRVGFVTPIGEREFDKGLIGHDIEEKRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZV62</accession>
    <name>A0A0M6ZV62_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">NADH-plastoquinone oxidoreductase subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">LAX5112_00877</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66121.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670770.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00877"/>
    <dbReference type="EnsemblBacteria" id="CTQ66121">
        <property type="protein sequence ID" value="CTQ66121"/>
        <property type="gene ID" value="LAX5112_00877"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017896">
        <property type="entry name" value="4Fe4S_Fe-S-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017900">
        <property type="entry name" value="4Fe4S_Fe_S_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12838">
        <property type="entry name" value="Fer4_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13187">
        <property type="entry name" value="Fer4_9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00198">
        <property type="entry name" value="4FE4S_FER_1"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51379">
        <property type="entry name" value="4FE4S_FER_2"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0408">Iron</keyword>
    <keyword evidence="3" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="5">
        <location>
            <begin position="299"/>
            <end position="328"/>
        </location>
    </feature>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="5">
        <location>
            <begin position="497"/>
            <end position="526"/>
        </location>
    </feature>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="5">
        <location>
            <begin position="528"/>
            <end position="557"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="631"/>
            <end position="652"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51379"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ66121.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="652" mass="69972" checksum="D65906E95F8D6D56" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZV94</accession>
    <name>A0A0M6ZV94_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">TRAP-type mannitol/chloroaromatic compound transport system, small permease component</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">LAX5112_00888</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66151.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008192345.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00888"/>
    <dbReference type="EnsemblBacteria" id="CTQ66151">
        <property type="protein sequence ID" value="CTQ66151"/>
        <property type="gene ID" value="LAX5112_00888"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007387">
        <property type="entry name" value="TRAP_DctQ"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35011">
        <property type="entry name" value="PTHR35011"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04290">
        <property type="entry name" value="DctQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="22"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="51"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="91"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="130"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="165"/>
            <end position="183"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ66151.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="198" mass="22530" checksum="E404D726CF16BDC2" modified="2015-12-09" version="1">MPRIAHWYVHAVDGFNRGLGKVIMWGVFVMAGILLWSSISKTFFNPSLWTLEVAQFAMVAYYVLGGPYSVQLGSNVRMDLFYAEWSIKKKAWFDAFTVLLLMFYLGVLLYGALGSMAYSLGYFGREFPEFYWELIMAFFTGGPVAAGEVMGYIERSPTAWRPVLWPIKVTMCIGFFLMLLQTISELIKDIATIRGETI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVC8</accession>
    <name>A0A0M6ZVC8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">GTP pyrophosphokinase rsh</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">(p)ppGpp synthase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="2">ATP:GTP 3'-pyrophosphotransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9" type="primary">rsh</name>
        <name evidence="9" type="ORF">LAX5112_01058</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">In eubacteria ppGpp (guanosine 3'-diphosphate 5'-diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the relA/spoT family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66688.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670939.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01058"/>
    <dbReference type="EnsemblBacteria" id="CTQ66688">
        <property type="protein sequence ID" value="CTQ66688"/>
        <property type="gene ID" value="LAX5112_01058"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015969">
        <property type="term" value="P:guanosine tetraphosphate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00077">
        <property type="entry name" value="HDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd05399">
        <property type="entry name" value="NT_Rel-Spo_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01668">
        <property type="entry name" value="TGS_RSH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.460.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045865">
        <property type="entry name" value="ACT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002912">
        <property type="entry name" value="ACT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012675">
        <property type="entry name" value="Beta-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003607">
        <property type="entry name" value="HD/PDEase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006674">
        <property type="entry name" value="HD_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043519">
        <property type="entry name" value="NT_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004811">
        <property type="entry name" value="RelA/Spo_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045600">
        <property type="entry name" value="RelA/SpoT_AH_RIS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007685">
        <property type="entry name" value="RelA_SpoT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004095">
        <property type="entry name" value="TGS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012676">
        <property type="entry name" value="TGS-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033655">
        <property type="entry name" value="TGS_RelA/SpoT"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13291">
        <property type="entry name" value="ACT_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19296">
        <property type="entry name" value="DUF5913"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04607">
        <property type="entry name" value="RelA_SpoT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02824">
        <property type="entry name" value="TGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00471">
        <property type="entry name" value="HDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00954">
        <property type="entry name" value="RelA_SpoT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55021">
        <property type="entry name" value="SSF55021"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81271">
        <property type="entry name" value="SSF81271"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81301">
        <property type="entry name" value="SSF81301"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00691">
        <property type="entry name" value="spoT_relA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51671">
        <property type="entry name" value="ACT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51831">
        <property type="entry name" value="HD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51880">
        <property type="entry name" value="TGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="9" id="KW-0418">Kinase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="HD" evidence="7">
        <location>
            <begin position="45"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="domain" description="TGS" evidence="8">
        <location>
            <begin position="391"/>
            <end position="452"/>
        </location>
    </feature>
    <feature type="domain" description="ACT" evidence="6">
        <location>
            <begin position="672"/>
            <end position="746"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="5">
        <location>
            <begin position="195"/>
            <end position="222"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00014315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00029754"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00032407"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003847"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51671"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51831"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51880"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ66688.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="746" mass="83521" checksum="BD67C7316B451998" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWG6</accession>
    <name>A0A0M6ZWG6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01023</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66591.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670917.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ66591">
        <property type="protein sequence ID" value="CTQ66591"/>
        <property type="gene ID" value="LAX5112_01023"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="339"/>
            <end position="439"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="339"/>
            <end position="354"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="371"/>
            <end position="399"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66591.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="439" mass="47456" checksum="B144B8A6AC3FBA77" modified="2015-12-09" version="1">MKIFPTPSIDAQVLMERYEPLSGNAILEIIVRAAVAAGLPADECKLLKTSTEKDIRVLCGNYHILVTQTVPFEASSQLETALNSFSVKSSFPEAAENIEATTAYTQISVHKGLIPIEAFPEGALQEIGESVATFTDSSESQMAMAIVKSVTASVANASSPTAIFWMPSLFLMTPDTFKLVADEDTPLLLYVHPHLYGEKSPLTGEQLISVIGSGAPSIIGYSVEFAPSKLPTGYLIERLYSFIGFTLKRGKAFPSGDVFGSDENEKIQVFHHPPQDGGAPRIELKVAHNPALGVERDPVPTIYKEYDTEGALTGERIDGAQEVVLDPDDPIDAAILQQLNRQKTGETSATTSENHAKPIRRRPVASPPDATRPDIQSQRPRVVSDETAGQSASETSEAGPRKRSSMDELRQIAIAAQQLNASDHPSKAGGFLGRFLKRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWR6</accession>
    <name>A0A0M6ZWR6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Manganese transport system membrane protein MntB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">mntB_1</name>
        <name evidence="8" type="ORF">LAX5112_00812</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cell membrane</location>
            <topology evidence="6">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the ABC-3 integral membrane protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65943.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670723.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00812"/>
    <dbReference type="EnsemblBacteria" id="CTQ65943">
        <property type="protein sequence ID" value="CTQ65943"/>
        <property type="gene ID" value="LAX5112_00812"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3470.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037294">
        <property type="entry name" value="ABC_BtuC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001626">
        <property type="entry name" value="ABC_TroCD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30477">
        <property type="entry name" value="PTHR30477"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00950">
        <property type="entry name" value="ABC-3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81345">
        <property type="entry name" value="SSF81345"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="18"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="58"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="95"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="134"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="197"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="223"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="250"/>
            <end position="270"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ65943.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="288" mass="30766" checksum="FD78898385BD7072" modified="2015-12-09" version="1">MDLDFLLLPFKFPFMQNAFLICVLVSIPTALLSCFLVMKGWALMGDAVSHAVLPGIVLAYIVGLPLILGAFAAGMVCAVATGYLSNNSRVKQDTVMGVVFSGMFGLGIVLYVAVETNAHLDHILFGNMLGVGNQDLWTAGIISLVVASGLVLKWKDLVLHSFDAAQAQASGLPVNWLHYGLLAALSLTIVATLSATGLILAIGLVIAPGAIAFLLVRKFSTMLWVSVIVCMLSMLAGTYLSFFIDSAPAPTIVLILTAAFIAAFIHRQIVTRHMSLRRVEDDTTLKEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZX58</accession>
    <name>A0A0M6ZX58_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative magnesium chelatase accessory protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01349</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67358.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01349"/>
    <dbReference type="EnsemblBacteria" id="CTQ67358">
        <property type="protein sequence ID" value="CTQ67358"/>
        <property type="gene ID" value="LAX5112_01349"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000073">
        <property type="entry name" value="AB_hydrolase_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12697">
        <property type="entry name" value="Abhydrolase_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AB hydrolase-1" evidence="1">
        <location>
            <begin position="39"/>
            <end position="251"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12697"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67358.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="294" mass="31443" checksum="666905E841D9C084" modified="2015-12-09" version="1">MTFPTSDAIRNPERTAKLSLQNGRRLAWSEWGPETGQPILFISGAGTAGSLGFGADCLDELNIRLIAPDRPGLGGSDPDPSKTLQSVADDFSEVIRHLGSGPMPVAAVSQGVPFALALAADGPVGRLAVVCGQDELSRPEFFSGLPDQLQQMVRDAKDDPHTLIAMLEGFTDPNSFLEFIISTSTELDQAVYLSEPFHLAFKSALERGFAQGPAGYALDTVAAMGPWTFTWDAITCPVDLWYGGKDASPVHSPDGGALMASRLKHANRHFFEDEGGSLLWTRSRDILTALVGEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXV6</accession>
    <name>A0A0M6ZXV6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01457</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67625.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008193987.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01457"/>
    <dbReference type="EnsemblBacteria" id="CTQ67625">
        <property type="protein sequence ID" value="CTQ67625"/>
        <property type="gene ID" value="LAX5112_01457"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="40"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="77"/>
            <end position="106"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67625.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="107" mass="11330" checksum="0B7800A69EB7B5B8" modified="2015-12-09" version="1">MSDLLIVGYIACAGFVAAGLLGSLYQLVTNQPPKFNFPESTALGFVAGVIVCVFAGPFIIMRNAIRGRRIENRPLGWLVASSTIAGMWSMCSGLMVMNVALIVAGYA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXZ9</accession>
    <name>A0A0M6ZXZ9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01244</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67167.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67167">
        <property type="protein sequence ID" value="CTQ67167"/>
        <property type="gene ID" value="LAX5112_01244"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="90"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="158"/>
            <end position="182"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67167.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="182" mass="20566" checksum="1C1676774063BB0C" modified="2015-12-09" version="1">MTDRYNAATYFELIVKPTYEEYQAAPFNFRKVFLAAMVMAPTPEYIPHETIEDAKAAKAKAYDLRDQWTDTNTSFKHLCLFANAAKHGRRSGTSEPAFPSEYRPPARAGHAVVGRSVTGDRSGRFWIEINGDKIDVHEMMRDAYAFISKKIQEHGGPVNYHSHTEWDPNRKHDGSGDPASSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYV5</accession>
    <name>A0A0M6ZYV5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Aminopeptidase N</fullName>
            <ecNumber evidence="4">3.4.11.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="primary">pepN_1</name>
        <name evidence="15" type="ORF">LAX5112_01346</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>Release of an N-terminal amino acid, Xaa-|-Yaa- from a peptide, amide or arylamide. Xaa is preferably Ala, but may be most amino acids including Pro (slow action). When a terminal hydrophobic residue is followed by a prolyl residue, the two may be released as an intact Xaa-Pro dipeptide.</text>
            <dbReference type="EC" id="3.4.11.2"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the peptidase M1 family.</text>
    </comment>
    <dbReference type="EC" id="3.4.11.2" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67352.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671161.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01346"/>
    <dbReference type="EnsemblBacteria" id="CTQ67352">
        <property type="protein sequence ID" value="CTQ67352"/>
        <property type="gene ID" value="LAX5112_01346"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004177">
        <property type="term" value="F:aminopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008237">
        <property type="term" value="F:metallopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.390.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.50.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1730">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1840">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045357">
        <property type="entry name" value="Aminopeptidase_N-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042097">
        <property type="entry name" value="Aminopeptidase_N-like_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038438">
        <property type="entry name" value="PepN_Ig-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001930">
        <property type="entry name" value="Peptidase_M1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014782">
        <property type="entry name" value="Peptidase_M1_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012779">
        <property type="entry name" value="Peptidase_M1_pepN"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024601">
        <property type="entry name" value="Peptidase_M1_pepN_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037144">
        <property type="entry name" value="Peptidase_M1_pepN_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035414">
        <property type="entry name" value="Peptidase_M1_pepN_Ig-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027268">
        <property type="entry name" value="Peptidase_M4/M1_CTD_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46322">
        <property type="entry name" value="PTHR46322"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11940">
        <property type="entry name" value="DUF3458"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17432">
        <property type="entry name" value="DUF3458_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01433">
        <property type="entry name" value="Peptidase_M1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17900">
        <property type="entry name" value="Peptidase_M1_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00756">
        <property type="entry name" value="ALADIPTASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63737">
        <property type="entry name" value="SSF63737"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02414">
        <property type="entry name" value="pepN_proteo"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="15" id="KW-0031">Aminopeptidase</keyword>
    <keyword evidence="8 15" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10" id="KW-0482">Metalloprotease</keyword>
    <keyword evidence="6" id="KW-0645">Protease</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Peptidase_M1_N" evidence="14">
        <location>
            <begin position="93"/>
            <end position="193"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_M1" evidence="11">
        <location>
            <begin position="232"/>
            <end position="443"/>
        </location>
    </feature>
    <feature type="domain" description="DUF3458" evidence="12">
        <location>
            <begin position="451"/>
            <end position="553"/>
        </location>
    </feature>
    <feature type="domain" description="DUF3458_C" evidence="13">
        <location>
            <begin position="558"/>
            <end position="881"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012564"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00015611"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF01433"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF11940"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF17432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF17900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="CTQ67352.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="881" mass="97424" checksum="0FA14307667BF85C" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZ26</accession>
    <name>A0A0M6ZZ26_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">D-inositol 3-phosphate glycosyltransferase</fullName>
            <ecNumber evidence="2">2.4.1.250</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">mshA_3</name>
        <name evidence="2" type="ORF">LAX5112_01317</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.4.1.250" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67300.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671139.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01317"/>
    <dbReference type="EnsemblBacteria" id="CTQ67300">
        <property type="protein sequence ID" value="CTQ67300"/>
        <property type="gene ID" value="LAX5112_01317"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102710">
        <property type="term" value="F:D-inositol-3-phosphate glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001296">
        <property type="entry name" value="Glyco_trans_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00534">
        <property type="entry name" value="Glycos_transf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glycos_transf_1" evidence="1">
        <location>
            <begin position="204"/>
            <end position="346"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00534"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67300.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="381" mass="42143" checksum="B79553E40685D593" modified="2015-12-09" version="1">MKIAFTAPMKPLDDPTPSGDRTMGRLIVKALEFGGHEVRTATRFRAWRKNGGDAELLSVKSAALQEAERVGDVWETEGYQPDIFLTYHLYHKAPDWIGPALADRFNIPFAVIEASRARKRRTGPWAIGFQGADDALTRADGIAALHDWDRDRLLPFFEETGTDPAQRLRTVLPFLDLSAFAKPQSARPVPEPPFKLLTVGMMREGDKTASYEVLAAALGQLSDLPWHLTIVGDGPNRDAILNQFPKDRITWLGALPPEQVIAEYPKYDLFVWPAIRESFGFVLLEAQASGLGVVAGDALGVPEIVANGTTGLLAPEGDAPVFAERLRQLHTDPQRVRSFGEAARARMFALHSLDAGARRLDAFLNCALDHYKRLSDQPKDR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZ95</accession>
    <name>A0A0M6ZZ95_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 9">2-isopropylmalate synthase</fullName>
            <ecNumber evidence="5 9">2.3.3.13</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">Alpha-IPM synthase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="9">Alpha-isopropylmalate synthase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="primary">leuA_2</name>
        <name evidence="9" type="synonym">leuA</name>
        <name evidence="11" type="ORF">LAX5112_01612</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2 9">Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 9">
            <text>3-methyl-2-oxobutanoate + acetyl-CoA + H2O = (2S)-2-isopropylmalate + CoA + H(+)</text>
            <dbReference type="Rhea" id="RHEA:21524"/>
            <dbReference type="ChEBI" id="CHEBI:1178"/>
            <dbReference type="ChEBI" id="CHEBI:11851"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57288"/>
            <dbReference type="EC" id="2.3.3.13"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3 9">Amino-acid biosynthesis; L-leucine biosynthesis; L-leucine from 3-methyl-2-oxobutanoate: step 1/4.</text>
    </comment>
    <comment type="subunit">
        <text evidence="9">Homotetramer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4 9">Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.3.3.13" evidence="5 9"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68035.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008193919.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01612"/>
    <dbReference type="EnsemblBacteria" id="CTQ68035">
        <property type="protein sequence ID" value="CTQ68035"/>
        <property type="gene ID" value="LAX5112_01612"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00048">
        <property type="reaction ID" value="UER00070"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003852">
        <property type="term" value="F:2-isopropylmalate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009098">
        <property type="term" value="P:leucine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01025">
        <property type="entry name" value="LeuA_type1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013709">
        <property type="entry name" value="2-isopropylmalate_synth_dimer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002034">
        <property type="entry name" value="AIPM/Hcit_synth_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036230">
        <property type="entry name" value="LeuA_allosteric_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005671">
        <property type="entry name" value="LeuA_bact_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000891">
        <property type="entry name" value="PYR_CT"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00682">
        <property type="entry name" value="HMGL-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08502">
        <property type="entry name" value="LeuA_dimer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00917">
        <property type="entry name" value="LeuA_dimer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF110921">
        <property type="entry name" value="SSF110921"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00973">
        <property type="entry name" value="leuA_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00815">
        <property type="entry name" value="AIPM_HOMOCIT_SYNTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00816">
        <property type="entry name" value="AIPM_HOMOCIT_SYNTH_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50991">
        <property type="entry name" value="PYR_CT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="9" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="8 9" id="KW-0100">Branched-chain amino acid biosynthesis</keyword>
    <keyword evidence="6 9" id="KW-0432">Leucine biosynthesis</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 9 11" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Pyruvate carboxyltransferase" evidence="10">
        <location>
            <begin position="10"/>
            <end position="272"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000064"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00003715"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004689"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00009396"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012973"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022430"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01025"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50991"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ68035.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="518" mass="56003" checksum="B44FD1E174AF0375" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0C8</accession>
    <name>A0A0M7A0C8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF2007 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01482</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67690.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671295.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01482"/>
    <dbReference type="EnsemblBacteria" id="CTQ67690">
        <property type="protein sequence ID" value="CTQ67690"/>
        <property type="gene ID" value="LAX5112_01482"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018551">
        <property type="entry name" value="DUF2007"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011322">
        <property type="entry name" value="N-reg_PII-like_a/b"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09413">
        <property type="entry name" value="DUF2007"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54913">
        <property type="entry name" value="SSF54913"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF2007" evidence="1">
        <location>
            <begin position="1"/>
            <end position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF09413"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67690.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="76" mass="8561" checksum="29C50348E4AA6619" modified="2015-12-09" version="1">MEELVRTNDPVLISFLESLLGEADIKHFVADGNMSILEGSLAMIPRRILVDSDQIEKARMLVREAGLEHELRLEGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1R8</accession>
    <name>A0A0M7A1R8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Cyclic di-GMP phosphodiesterase Gmr</fullName>
            <ecNumber evidence="5">3.1.4.52</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">gmr_6</name>
        <name evidence="5" type="ORF">LAX5112_01471</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.4.52" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67663.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01471"/>
    <dbReference type="EnsemblBacteria" id="CTQ67663">
        <property type="protein sequence ID" value="CTQ67663"/>
        <property type="gene ID" value="LAX5112_01471"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071111">
        <property type="term" value="F:cyclic-guanylate-specific phosphodiesterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01948">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01949">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.450">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033462">
        <property type="entry name" value="Cache_3-Cache_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001633">
        <property type="entry name" value="EAL_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035919">
        <property type="entry name" value="EAL_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000160">
        <property type="entry name" value="GGDEF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17201">
        <property type="entry name" value="Cache_3-Cache_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00563">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00990">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00052">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00267">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141868">
        <property type="entry name" value="SSF141868"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00254">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50883">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50887">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="26"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="224"/>
            <end position="243"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="3">
        <location>
            <begin position="244"/>
            <end position="297"/>
        </location>
    </feature>
    <feature type="domain" description="GGDEF" evidence="4">
        <location>
            <begin position="329"/>
            <end position="462"/>
        </location>
    </feature>
    <feature type="domain" description="EAL" evidence="2">
        <location>
            <begin position="471"/>
            <end position="726"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ67663.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="741" mass="80920" checksum="BC77D71D6B11C28E" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1V2</accession>
    <name>A0A0M7A1V2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">50S ribosomal protein L30</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 7" type="primary">rpmD</name>
        <name evidence="7" type="ORF">LAX5112_01744</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="2 5">Part of the 50S ribosomal subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the universal ribosomal protein uL30 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68452.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_006936433.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01744"/>
    <dbReference type="EnsemblBacteria" id="CTQ68452">
        <property type="protein sequence ID" value="CTQ68452"/>
        <property type="gene ID" value="LAX5112_01744"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015934">
        <property type="term" value="C:large ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01658">
        <property type="entry name" value="Ribosomal_L30"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1390.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01371_B">
        <property type="entry name" value="Ribosomal_L30_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036919">
        <property type="entry name" value="L30_ferredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005996">
        <property type="entry name" value="Ribosomal_L30_bac-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016082">
        <property type="entry name" value="Ribosomal_L30_ferredoxin-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15892">
        <property type="entry name" value="PTHR15892"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00327">
        <property type="entry name" value="Ribosomal_L30"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002211">
        <property type="entry name" value="Ribosomal_L30_bac-type"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55129">
        <property type="entry name" value="SSF55129"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01308">
        <property type="entry name" value="rpmD_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3 5 7" id="KW-0689">Ribosomal protein</keyword>
    <feature type="domain" description="Ribosomal_L30" evidence="6">
        <location>
            <begin position="9"/>
            <end position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007594"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011838"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01371"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00327"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ68452.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="65" mass="7335" checksum="48FEE0801A2478A5" modified="2015-12-09" version="1">MANTEKTVTVEQIGSPLRRPKDQRATLVGLGLNKMHRRSTLKDTPEVRGMINKVQHLVRVVEDNA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2D7</accession>
    <name>A0A0M7A2D7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 7">ATP-dependent Clp protease proteolytic subunit</fullName>
            <ecNumber evidence="5">3.4.21.92</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Endopeptidase Clp</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9" type="primary">clpP_1</name>
        <name evidence="5" type="synonym">clpP</name>
        <name evidence="9" type="ORF">LAX5112_01819</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Fourteen ClpP subunits assemble into 2 heptameric rings which stack back to back to give a disk-like structure with a central cavity, resembling the structure of eukaryotic proteasomes.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 5 7">Belongs to the peptidase S14 family.</text>
    </comment>
    <dbReference type="EC" id="3.4.21.92" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68642.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671538.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01819"/>
    <dbReference type="EnsemblBacteria" id="CTQ68642">
        <property type="protein sequence ID" value="CTQ68642"/>
        <property type="gene ID" value="LAX5112_01819"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004176">
        <property type="term" value="F:ATP-dependent peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004252">
        <property type="term" value="F:serine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd07017">
        <property type="entry name" value="S14_ClpP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00444">
        <property type="entry name" value="ClpP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001907">
        <property type="entry name" value="ClpP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029045">
        <property type="entry name" value="ClpP/crotonase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023562">
        <property type="entry name" value="ClpP/TepA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033135">
        <property type="entry name" value="ClpP_His_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10381">
        <property type="entry name" value="PTHR10381"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00574">
        <property type="entry name" value="CLP_protease"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00127">
        <property type="entry name" value="CLPPROTEASEP"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52096">
        <property type="entry name" value="SSF52096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00382">
        <property type="entry name" value="CLP_PROTEASE_HIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 5 9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 5 9" id="KW-0645">Protease</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0720">Serine protease</keyword>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="9"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="5">
        <location>
            <position position="105"/>
        </location>
    </feature>
    <feature type="active site" evidence="5 6">
        <location>
            <position position="130"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007039"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00444"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10086"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003567"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ68642.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="204" mass="22371" checksum="46399DFF58D8026C" modified="2015-12-09" version="1">MKNYSTTVPARLDDEDEDKSKAQQSIQVDKHLFEARTVLITGPVTQDMARDVCARLLALAQVSNDPITVIVSSPGGHVESGDMIHDAIKFISPEVRILGMGWVASAGALIYVSVPKELRFCTPNTRFLLHQPSGGAGGMATDIEIQAKEIIKMRDRLNKIFADATGQPIERIEKDTDRDYWMSPEEGIDYGLVGKVVTSVNELG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2K3</accession>
    <name>A0A0M7A2K3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">EamA-like transporter family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01774</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68530.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671501.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01774"/>
    <dbReference type="EnsemblBacteria" id="CTQ68530">
        <property type="protein sequence ID" value="CTQ68530"/>
        <property type="gene ID" value="LAX5112_01774"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000620">
        <property type="entry name" value="EamA_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00892">
        <property type="entry name" value="EamA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="21"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="56"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="85"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="111"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="139"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="162"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="196"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="220"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="262"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="domain" description="EamA" evidence="2">
        <location>
            <begin position="23"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="domain" description="EamA" evidence="2">
        <location>
            <begin position="165"/>
            <end position="296"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ68530.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="310" mass="32590" checksum="5987097F9E80E595" modified="2015-12-09" version="1">MKTGTDLKTMDTRPSSLQAQPVLAALAMVGAGASFALVNGALQASTMQLGVPSTSAAFWQYALGLGFALPCVLRRGRTALKTQQLGLHLLRAFLAVIGIQLWVAGLARVEIWQAIALVMTSPFFVILGARIFLGEQVGWVRWFATIAGFSGGMVILEPWSQAFNWGALLPVAAAAFWAGTSLVTKKLTQREAADSITLYLLLLLTPVNAALALADGGLVVSGPALVLLVGAGLLTVLANYLLTLAYQKADATFVQPFDHLKLPLNIAVGFIAFGFAPTGAFWPGALVIVGASLLVMLDEQRRGNAAAKTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A310</accession>
    <name>A0A0M7A310_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Degradation activator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">degA_1</name>
        <name evidence="5" type="ORF">LAX5112_02118</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69448.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671777.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02118"/>
    <dbReference type="EnsemblBacteria" id="CTQ69448">
        <property type="protein sequence ID" value="CTQ69448"/>
        <property type="gene ID" value="LAX5112_02118"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01392">
        <property type="entry name" value="HTH_LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000843">
        <property type="entry name" value="HTH_LacI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046335">
        <property type="entry name" value="LacI/GalR-like_sensor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00356">
        <property type="entry name" value="LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13377">
        <property type="entry name" value="Peripla_BP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00036">
        <property type="entry name" value="HTHLACI"/>
    </dbReference>
    <dbReference type="SMART" id="SM00354">
        <property type="entry name" value="HTH_LACI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50932">
        <property type="entry name" value="HTH_LACI_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH lacI-type" evidence="4">
        <location>
            <begin position="13"/>
            <end position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ69448.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="339" mass="36603" checksum="67BD75C565B4FF40" modified="2015-12-09" version="1">MEEISKSPVSDVPTLADVAARAGVSTATVSRCLNTPDRVTEKTLKTVMDAVNHLGYAPNYSARALAAGRTNMIGAIIPTMENAIFARGIQAFQEELQKNGCTLLVASSSYRQDLEEEQIRTLTARGADALLLIGYQRDPQIYEFLKKRKIPAVLTWASEPSQNFLSVGFDNRKAMKELATDVIGKGHRTIGCISADTATNDRARERVEGIWAAMRNAGLEPDTLQVVETAYSIENGEAAFQQLMSGANPPTAVMCGNDVLAVGALRAAADLGLKVPDDVAITGFDNIELAFVAPVPLTTVHVPHRRMGQLAARALIEALHGRSPESVELPTEVRHRNTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A389</accession>
    <name>A0A0M7A389_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">HTH-type transcriptional repressor BdcR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">bdcR</name>
        <name evidence="4" type="ORF">LAX5112_01880</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68770.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671578.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ68770">
        <property type="protein sequence ID" value="CTQ68770"/>
        <property type="gene ID" value="LAX5112_01880"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036271">
        <property type="entry name" value="Tet_transcr_reg_TetR-rel_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00440">
        <property type="entry name" value="TetR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00455">
        <property type="entry name" value="HTHTETR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48498">
        <property type="entry name" value="SSF48498"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50977">
        <property type="entry name" value="HTH_TETR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH tetR-type" evidence="3">
        <location>
            <begin position="27"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="1">
        <location>
            <begin position="50"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ68770.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="204" mass="21744" checksum="6906CFEC8706625E" modified="2015-12-09" version="1">MSDTADIRKTIGPKSVGRAPGPGRPREFDETKALETALNVFWQKGFEAASLDDLTKAMGLSRSSFYGTFGSKQALFHRALVQYSHKALDNLQGVADTAANDPVMAMVEALADPQGGSRGCMLINCVTELAPHDQDVATIGRRHLESIEEIIAKAIKPDNPEAARDQASAYASLAIGTLALRKAGVPADRIAKTLAQAKSILNPD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3A6</accession>
    <name>A0A0M7A3A6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="12">Bacteriophytochrome cph2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">cph2_8</name>
        <name evidence="12" type="ORF">LAX5112_01888</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ammonia transporter channel (TC 1.A.11.2) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68790.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01888"/>
    <dbReference type="EnsemblBacteria" id="CTQ68790">
        <property type="protein sequence ID" value="CTQ68790"/>
        <property type="gene ID" value="LAX5112_01888"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008519">
        <property type="term" value="F:ammonium transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01948">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01949">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00130">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3430.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.450">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029020">
        <property type="entry name" value="Ammonium/urea_transptr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001905">
        <property type="entry name" value="Ammonium_transpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018047">
        <property type="entry name" value="Ammonium_transpt_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001633">
        <property type="entry name" value="EAL_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035919">
        <property type="entry name" value="EAL_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000160">
        <property type="entry name" value="GGDEF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024041">
        <property type="entry name" value="NH4_transpt_AmtB-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000014">
        <property type="entry name" value="PAS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035965">
        <property type="entry name" value="PAS-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00909">
        <property type="entry name" value="Ammonium_transp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00563">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00990">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13426">
        <property type="entry name" value="PAS_9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00052">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00267">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00091">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141868">
        <property type="entry name" value="SSF141868"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55785">
        <property type="entry name" value="SSF55785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00836">
        <property type="entry name" value="amt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00254">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00229">
        <property type="entry name" value="sensory_box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01219">
        <property type="entry name" value="AMMONIUM_TRANSP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50883">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50887">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50112">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0924">Ammonia transport</keyword>
    <keyword evidence="6 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="17"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="58"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="94"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="128"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="169"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="212"/>
            <end position="231"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="243"/>
            <end position="262"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="274"/>
            <end position="293"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="327"/>
            <end position="348"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="360"/>
            <end position="385"/>
        </location>
    </feature>
    <feature type="domain" description="PAS" evidence="9">
        <location>
            <begin position="474"/>
            <end position="544"/>
        </location>
    </feature>
    <feature type="domain" description="GGDEF" evidence="11">
        <location>
            <begin position="625"/>
            <end position="758"/>
        </location>
    </feature>
    <feature type="domain" description="EAL" evidence="10">
        <location>
            <begin position="767"/>
            <end position="1017"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023177"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50112"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ68790.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="1042" mass="112065" checksum="DC54B2932615A733" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A557</accession>
    <name>A0A0M7A557_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02234</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69747.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671925.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02234"/>
    <dbReference type="EnsemblBacteria" id="CTQ69747">
        <property type="protein sequence ID" value="CTQ69747"/>
        <property type="gene ID" value="LAX5112_02234"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022742">
        <property type="entry name" value="Hydrolase_4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12146">
        <property type="entry name" value="Hydrolase_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Hydrolase_4" evidence="1">
        <location>
            <begin position="52"/>
            <end position="238"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69747.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="260" mass="28484" checksum="105BAE5B702A16B9" modified="2015-12-09" version="1">MGAAEPQFIEVGKNGQTRKIAVRKDAGRSPGLMWLSGFKSDMSGTKAEALSEFARERGQEAVRFDYSGHGTSEGDFEEACVSNWLEEAEAVFDTCTSGETILVGSSMGGWIALLLALSRKQTSRVKGLILIAPATDFTEELMWKERFSDDIRAAILQDGRWEQPSEYSDDPYVITRKLIEDGRSHLLFGSSLHVGVPITILQGTLDPDVPLGHAERLVQALPQDDVTFTVVPDGDHRLSRPEDIELLIRSAGSMIEAVSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5R0</accession>
    <name>A0A0M7A5R0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Sulfur carrier protein FdhD</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">fdhD</name>
        <name evidence="5" type="ORF">LAX5112_01951</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the FdhD family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68964.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01951"/>
    <dbReference type="EnsemblBacteria" id="CTQ68964">
        <property type="protein sequence ID" value="CTQ68964"/>
        <property type="gene ID" value="LAX5112_01951"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0097163">
        <property type="term" value="F:sulfur carrier activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016783">
        <property type="term" value="F:sulfurtransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006777">
        <property type="term" value="P:Mo-molybdopterin cofactor biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00187">
        <property type="entry name" value="FdhD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016193">
        <property type="entry name" value="Cytidine_deaminase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003786">
        <property type="entry name" value="FdhD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30592">
        <property type="entry name" value="PTHR30592"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02634">
        <property type="entry name" value="FdhD-NarQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF015626">
        <property type="entry name" value="FdhD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53927">
        <property type="entry name" value="SSF53927"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00129">
        <property type="entry name" value="fdhD_narQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2 3" id="KW-0501">Molybdenum cofactor biosynthesis</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="271"/>
            <end position="292"/>
        </location>
    </feature>
    <feature type="active site" description="Cysteine persulfide intermediate" evidence="3">
        <location>
            <position position="114"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023150"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ68964.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="292" mass="32184" checksum="BA5E783363274CF7" modified="2015-12-09" version="1">MTAPYILQPDPYNPALSTSVTGIDHTGAEVDTRVVTEKPLTLFLNSQEVVTMMTIGDHPDLLAVGYLKNQNMLAPDDVITGIEYDDDLEVVIVRTERETNFEDKLKKKVRTSGCAQGTVFGDVMEGFETIDLPKDARLKTSWLYALTRAINTTPSLYLEAGAIHGCVLCRHDQPLVYMEDVGRHNAVDKIAGWMELNKVPAEDKIFYTTGRLTSEMVIKTVMMGIPILVSRSGFTAWGVELAQQAGLTLIGRARGKRFVVLSGSERIDFDMDPALADDEPRGSGRKGSEKAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A627</accession>
    <name>A0A0M7A627_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Nitrous oxide reductase family maturation protein NosD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02216</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69700.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671852.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02216"/>
    <dbReference type="EnsemblBacteria" id="CTQ69700">
        <property type="protein sequence ID" value="CTQ69700"/>
        <property type="gene ID" value="LAX5112_02216"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007156">
        <property type="term" value="P:homophilic cell adhesion via plasma membrane adhesion molecules"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.10">
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002126">
        <property type="entry name" value="Cadherin-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015919">
        <property type="entry name" value="Cadherin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001343">
        <property type="entry name" value="Hemolysn_Ca-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006626">
        <property type="entry name" value="PbH1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012334">
        <property type="entry name" value="Pectin_lyas_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011050">
        <property type="entry name" value="Pectin_lyase_fold/virulence"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00353">
        <property type="entry name" value="HemolysinCabind"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00710">
        <property type="entry name" value="PbH1"/>
        <property type="match status" value="12"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49313">
        <property type="entry name" value="SSF49313"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51126">
        <property type="entry name" value="SSF51126"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50268">
        <property type="entry name" value="CADHERIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cadherin" evidence="2">
        <location>
            <begin position="251"/>
            <end position="333"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="181"/>
            <end position="231"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="181"/>
            <end position="195"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50268"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ69700.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="1466" mass="149725" checksum="46D75C33AB9AFB91" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6B7</accession>
    <name>A0A0M7A6B7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Isonitrile hydratase</fullName>
            <ecNumber evidence="3">4.2.1.103</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">inhA_2</name>
        <name evidence="3" type="ORF">LAX5112_02056</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="4.2.1.103" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69283.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671736.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ69283">
        <property type="protein sequence ID" value="CTQ69283"/>
        <property type="gene ID" value="LAX5112_02056"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050549">
        <property type="term" value="F:cyclohexyl-isocyanide hydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002818">
        <property type="entry name" value="DJ-1/PfpI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018062">
        <property type="entry name" value="HTH_AraC-typ_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01965">
        <property type="entry name" value="DJ-1_PfpI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="SSF52317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00041">
        <property type="entry name" value="HTH_ARAC_FAMILY_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="3" id="KW-0456">Lyase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="2">
        <location>
            <begin position="218"/>
            <end position="315"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ69283.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="318" mass="34906" checksum="F0250C4463E27D1F" modified="2015-12-09" version="1">MTRRIEILTYDAVQVLDITGPMQVFASANEQLIAAGKTAAYEIETVSAVSPVKSSSGLALLAGPLPNDDSVIDTLLVPGGYGIDRLCEDADILGWLTARAPNARRIASVCSGAFLLATAGFLDGKQAATHWQRCAEFKRRFPEVRLKADPIYVQDGSLWTSAGVTAGIDLALALVQEDLGRELALQVARQLVVFLKRPGGQSQFSAALTLQNDSGRFDQLHAWMIENLQNPITLNDMAEQAVMSPRTLSRHYKKETGRSPMRTLEELRLDQARQLLEQDRPVAQAASRSGFGTEETLRQAFQRRFGVSPQAYRERFSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="35" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6G4</accession>
    <name>A0A0M7A6G4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Isoleucine--tRNA ligase</fullName>
            <ecNumber evidence="9">6.1.1.5</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">Isoleucyl-tRNA synthetase</fullName>
            <shortName evidence="9">IleRS</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9 13" type="primary">ileS</name>
        <name evidence="13" type="ORF">LAX5112_02318</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8 9">Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 9">
            <text>ATP + L-isoleucine + tRNA(Ile) = AMP + diphosphate + L-isoleucyl-tRNA(Ile)</text>
            <dbReference type="Rhea" id="RHEA:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:9666"/>
            <dbReference type="Rhea" id="RHEA-COMP:9695"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:58045"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78528"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.5"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="9">Monomer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="domain">
        <text evidence="9">IleRS has two distinct active sites: one for aminoacylation and one for editing. The misactivated valine is translocated from the active site to the editing site, which sterically excludes the correctly activated isoleucine. The single editing site contains two valyl binding pockets, one specific for each substrate (Val-AMP or Val-tRNA(Ile)).</text>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.5" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70006.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671949.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02318"/>
    <dbReference type="EnsemblBacteria" id="CTQ70006">
        <property type="protein sequence ID" value="CTQ70006"/>
        <property type="gene ID" value="LAX5112_02318"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0002161">
        <property type="term" value="F:aminoacyl-tRNA editing activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004822">
        <property type="term" value="F:isoleucine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006428">
        <property type="term" value="P:isoleucyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd07960">
        <property type="entry name" value="Anticodon_Ia_Ile_BEm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.740.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02002">
        <property type="entry name" value="Ile_tRNA_synth_type1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001412">
        <property type="entry name" value="aa-tRNA-synth_I_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002300">
        <property type="entry name" value="aa-tRNA-synth_Ia"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033708">
        <property type="entry name" value="Anticodon_Ile_BEm"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002301">
        <property type="entry name" value="Ile-tRNA-ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023585">
        <property type="entry name" value="Ile-tRNA-ligase_type1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013155">
        <property type="entry name" value="M/V/L/I-tRNA-synth_anticd-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009080">
        <property type="entry name" value="tRNAsynth_Ia_anticodon-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009008">
        <property type="entry name" value="Val/Leu/Ile-tRNA-synth_edit"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08264">
        <property type="entry name" value="Anticodon_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00133">
        <property type="entry name" value="tRNA-synt_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00984">
        <property type="entry name" value="TRNASYNTHILE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47323">
        <property type="entry name" value="SSF47323"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50677">
        <property type="entry name" value="SSF50677"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00392">
        <property type="entry name" value="ileS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00178">
        <property type="entry name" value="AA_TRNA_LIGASE_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 9 10" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="5 9 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 9 10" id="KW-0436">Ligase</keyword>
    <keyword evidence="4 9 10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6 9 10" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="tRNA-synt_1" evidence="11">
        <location>
            <begin position="33"/>
            <end position="695"/>
        </location>
    </feature>
    <feature type="domain" description="Anticodon_1" evidence="12">
        <location>
            <begin position="739"/>
            <end position="888"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="'HIGH' region" evidence="9">
        <location>
            <begin position="63"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="'KMSKS' region" evidence="9">
        <location>
            <begin position="657"/>
            <end position="661"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="616"/>
        </location>
        <ligand>
            <name>L-isoleucyl-5'-AMP</name>
            <dbReference type="ChEBI" id="CHEBI:178002"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="660"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000114"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00025217"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU363035"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF00133"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF08264"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="CTQ70006.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="986" mass="111404" checksum="E1C6BB0039DB5330" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A741</accession>
    <name>A0A0M7A741_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 7">Threonylcarbamoyl-AMP synthase</fullName>
            <shortName evidence="7">TC-AMP synthase</shortName>
            <ecNumber evidence="4 7">2.7.7.87</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6 7">L-threonylcarbamoyladenylate synthase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="10" type="primary">rimN</name>
        <name evidence="10" type="ORF">LAX5112_02508</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>ATP + hydrogencarbonate + L-threonine = diphosphate + H2O + L-threonylcarbamoyladenylate</text>
            <dbReference type="Rhea" id="RHEA:36407"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:17544"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57926"/>
            <dbReference type="ChEBI" id="CHEBI:73682"/>
            <dbReference type="EC" id="2.7.7.87"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 7">Belongs to the SUA5 family.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.87" evidence="4 7"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70437.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672087.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02508"/>
    <dbReference type="EnsemblBacteria" id="CTQ70437">
        <property type="protein sequence ID" value="CTQ70437"/>
        <property type="gene ID" value="LAX5112_02508"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003725">
        <property type="term" value="F:double-stranded RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061710">
        <property type="term" value="F:L-threonylcarbamoyladenylate synthase"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008033">
        <property type="term" value="P:tRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.11030">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017945">
        <property type="entry name" value="DHBP_synth_RibB-like_a/b_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038385">
        <property type="entry name" value="Sua5/YwlC_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005145">
        <property type="entry name" value="Sua5_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010923">
        <property type="entry name" value="T(6)A37_SUA5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006070">
        <property type="entry name" value="YrdC-like_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03481">
        <property type="entry name" value="SUA5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01300">
        <property type="entry name" value="Sua5_yciO_yrdC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004930">
        <property type="entry name" value="Tln_factor_SUA5"/>
        <property type="match status" value="1"/>
    </dbReference>
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        <property type="entry name" value="SSF55821"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00057">
        <property type="entry name" value="TIGR00057"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51163">
        <property type="entry name" value="YRDC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0808">Transferase</keyword>
    <keyword evidence="7" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="YrdC-like" evidence="9">
        <location>
            <begin position="16"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="38"/>
        </location>
        <ligand>
            <name>L-threonine</name>
            <dbReference type="ChEBI" id="CHEBI:57926"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="61"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
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        <location>
            <position position="65"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="70"/>
        </location>
        <ligand>
            <name>L-threonine</name>
            <dbReference type="ChEBI" id="CHEBI:57926"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="121"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="125"/>
        </location>
        <ligand>
            <name>L-threonine</name>
            <dbReference type="ChEBI" id="CHEBI:57926"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="145"/>
        </location>
        <ligand>
            <name>L-threonine</name>
            <dbReference type="ChEBI" id="CHEBI:57926"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="147"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="155"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="185"/>
        </location>
        <ligand>
            <name>L-threonine</name>
            <dbReference type="ChEBI" id="CHEBI:57926"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="199"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="238"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001803"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007663"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012584"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00015492"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00029774"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRNR" id="PIRNR004930"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR004930-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ70437.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="331" mass="34851" checksum="9B90946845F663C6" modified="2015-12-09" version="1">MQRWNVNLSSSDWQDDPEAVAVCQSLIDGGLVAVPTETVYGLAADATSGTACARIFQAKGRPSFNPLISHLPSLEAALHHGVFDDRALKLAEAFWPGPLTLVVPKTDASEISDLATAGLSTVALRVPSGPIMRYLSEITGRPLAAPSANRSGKISPTRAEDVIVDLGDALDFVIDAGPCEVGIESTIVGLTDEHVTLLRPGGLAREAIESVLQTKVRTPASNGQPEAPAAPGMLTSHYAPNAQMRLHARAVAPDEALLSFGEDPIEGRDEAFAETNLSPSGDLVEAAARLFQAMRTLDSSGAKTIQVQDIPNTGLGEAINDRLRRAAAPRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7F6</accession>
    <name>A0A0M7A7F6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Antibiotic biosynthesis monooxygenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02476</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70346.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672067.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02476"/>
    <dbReference type="EnsemblBacteria" id="CTQ70346">
        <property type="protein sequence ID" value="CTQ70346"/>
        <property type="gene ID" value="LAX5112_02476"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004497">
        <property type="term" value="F:monooxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007138">
        <property type="entry name" value="ABM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038762">
        <property type="entry name" value="ABM_predict"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR40057">
        <property type="entry name" value="PTHR40057"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03992">
        <property type="entry name" value="ABM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51725">
        <property type="entry name" value="ABM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0503">Monooxygenase</keyword>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="119"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="147"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="domain" description="ABM" evidence="2">
        <location>
            <begin position="5"/>
            <end position="95"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51725"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ70346.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="184" mass="21051" checksum="8C40FB0A8FF670D2" modified="2015-12-09" version="1">MTDTVTIVVRQRVKPGRETEYEAWLKRMTEGAQANFPGYLGVGFHRPENPGEQYRQIFRFEGVEALEAFERSDYRANMLAEGAHLFAAAPAWERMTGLEFWFDPPKGTRIAKPSPHRMALVMIAVVFTMILILSTGLALLTPNWPQPLRLLLTVSIQVVLMTYIVMPWLTPRIARFVYPNSKII</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="32" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7J7</accession>
    <name>A0A0M7A7J7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7 10">3,4-dihydroxy-2-butanone 4-phosphate synthase</fullName>
            <shortName evidence="10">DHBP synthase</shortName>
            <ecNumber evidence="6 10">4.1.99.12</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">ribBA</name>
        <name evidence="10" type="synonym">ribB</name>
        <name evidence="13" type="ORF">LAX5112_02490</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2 10">Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 10">
            <text>D-ribulose 5-phosphate = (2S)-2-hydroxy-3-oxobutyl phosphate + formate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:18457"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15740"/>
            <dbReference type="ChEBI" id="CHEBI:58121"/>
            <dbReference type="ChEBI" id="CHEBI:58830"/>
            <dbReference type="EC" id="4.1.99.12"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="10">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <cofactor evidence="10">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
        <text evidence="10">Binds 2 divalent metal cations per subunit. Magnesium or manganese.</text>
    </comment>
    <comment type="pathway">
        <text evidence="3 10">Cofactor biosynthesis; riboflavin biosynthesis; 2-hydroxy-3-oxobutyl phosphate from D-ribulose 5-phosphate: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="10">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="10">Belongs to the DHBP synthase family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5">In the C-terminal section; belongs to the GTP cyclohydrolase II family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">In the N-terminal section; belongs to the DHBP synthase family.</text>
    </comment>
    <dbReference type="EC" id="4.1.99.12" evidence="6 10"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70386.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02490"/>
    <dbReference type="EnsemblBacteria" id="CTQ70386">
        <property type="protein sequence ID" value="CTQ70386"/>
        <property type="gene ID" value="LAX5112_02490"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00275">
        <property type="reaction ID" value="UER00399"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008686">
        <property type="term" value="F:3,4-dihydroxy-2-butanone-4-phosphate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030145">
        <property type="term" value="F:manganese ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009231">
        <property type="term" value="P:riboflavin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10990">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00180">
        <property type="entry name" value="RibB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017945">
        <property type="entry name" value="DHBP_synth_RibB-like_a/b_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000422">
        <property type="entry name" value="DHBP_synthase_RibB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032677">
        <property type="entry name" value="GTP_cyclohydro_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036144">
        <property type="entry name" value="RibA-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00926">
        <property type="entry name" value="DHBP_synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00925">
        <property type="entry name" value="GTP_cyclohydro2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF142695">
        <property type="entry name" value="SSF142695"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55821">
        <property type="entry name" value="SSF55821"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00506">
        <property type="entry name" value="ribB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0456">Lyase</keyword>
    <keyword evidence="10" id="KW-0460">Magnesium</keyword>
    <keyword evidence="10" id="KW-0464">Manganese</keyword>
    <keyword evidence="9 10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 10" id="KW-0686">Riboflavin biosynthesis</keyword>
    <feature type="domain" description="GTP_cyclohydro2" evidence="12">
        <location>
            <begin position="271"/>
            <end position="426"/>
        </location>
    </feature>
    <feature type="region of interest" description="D-ribulose 5-phosphate binding" evidence="10">
        <location>
            <begin position="90"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="region of interest" description="D-ribulose 5-phosphate binding" evidence="10">
        <location>
            <begin position="203"/>
            <end position="207"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="360"/>
            <end position="381"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="11">
        <location>
            <begin position="365"/>
            <end position="381"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="91"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="95"/>
        </location>
        <ligand>
            <name>D-ribulose 5-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58121"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="206"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="site" description="Essential for catalytic activity" evidence="10">
        <location>
            <position position="189"/>
        </location>
    </feature>
    <feature type="site" description="Essential for catalytic activity" evidence="10">
        <location>
            <position position="227"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00002284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004904"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00005520"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00008976"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00012153"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00018836"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022619"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF00925"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="CTQ70386.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="432" mass="47302" checksum="84D4AFD6F1CE0FF8" modified="2015-12-09" version="1">MQTGESRSAFARRANLSPASVTALCNDPNVWVSRDMARKIAIATNGEVTPNDFLGLATTKEHPVSQARVAEAIRAFERGEMVVVTDDDDRENEGDLIVAASKVTPEQMAFMVRHTSGIICAPMTVAHARRLRLDPMVAENDAPLATAFTISVDYRQGLTTGISAEERCSTVRALANPNVGADDFVRPGHIFPLVAKEGGVMMRSGHTEAAVDLCRLAGLEQVGVISELVNDDGTVKRGAQVAEFAAEFDLKMVSVSDLIAWRQRTERMVERVNEQPVETIAGPAYAMTYSTPYDPMHHVAIVYGDILDGRSVPVRLQLESVLDDTFGDARPLDTIMKHFADRGRGVVVYLREGSVGVARQSTRPRSDFEAAETEDHSSAQARQEQWREVGLGAQILKDLGVSSIRLLASRERHYVGLEGFDIKIDETEILDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7Q9</accession>
    <name>A0A0M7A7Q9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Multidrug resistance operon repressor</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">mexR</name>
        <name evidence="2" type="ORF">LAX5112_02727</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71128.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672277.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ71128">
        <property type="protein sequence ID" value="CTQ71128"/>
        <property type="gene ID" value="LAX5112_02727"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000835">
        <property type="entry name" value="HTH_MarR-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12802">
        <property type="entry name" value="MarR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00598">
        <property type="entry name" value="HTHMARR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00347">
        <property type="entry name" value="HTH_MARR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50995">
        <property type="entry name" value="HTH_MARR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH marR-type" evidence="1">
        <location>
            <begin position="17"/>
            <end position="152"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71128.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="163" mass="18160" checksum="ED7BBD25E25E2306" modified="2015-12-09" version="1">MTEHGNETDFTPNGFQLETFFPYLVRVFYSDVTRALSDVYQRDYGMAPAEWRVMAILGSSVEGLQASEIVHRSSMDKVVVSRAVKRMEDRGFLTRQSNEADGRSYLLSLSKSGRSAFQDLAPKLLAVEQKMLGGLAPQEIEAMLDIMTRIRANLDAETGETGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7R8</accession>
    <name>A0A0M7A7R8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02446</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70280.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70280">
        <property type="protein sequence ID" value="CTQ70280"/>
        <property type="gene ID" value="LAX5112_02446"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ70280.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="63" mass="6811" checksum="71A633C30EAB1D1D" modified="2015-12-09" version="1">MRGWAVAAVPALSRDRATSPPTMSGAALLRWLCFEPIAALLAGEVGRRPRWLGADLVNLVILR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A810</accession>
    <name>A0A0M7A810_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Acetate CoA-transferase subunit alpha</fullName>
            <ecNumber evidence="3">2.8.3.8</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">atoD</name>
        <name evidence="3" type="ORF">LAX5112_02597</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the 3-oxoacid CoA-transferase subunit A family.</text>
    </comment>
    <dbReference type="EC" id="2.8.3.8" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70747.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672182.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02597"/>
    <dbReference type="EnsemblBacteria" id="CTQ70747">
        <property type="protein sequence ID" value="CTQ70747"/>
        <property type="gene ID" value="LAX5112_02597"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008775">
        <property type="term" value="F:acetate CoA-transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012792">
        <property type="entry name" value="3-oxoacid_CoA-transf_A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004165">
        <property type="entry name" value="CoA_trans_fam_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004163">
        <property type="entry name" value="CoA_transf_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037171">
        <property type="entry name" value="NagB/RpiA_transferase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13707">
        <property type="entry name" value="PTHR13707"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01144">
        <property type="entry name" value="CoA_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00882">
        <property type="entry name" value="CoA_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100950">
        <property type="entry name" value="SSF100950"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02429">
        <property type="entry name" value="pcaI_scoA_fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01273">
        <property type="entry name" value="COA_TRANSF_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005612"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ70747.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="217" mass="22404" checksum="CD16368CF4D92972" modified="2015-12-09" version="1">MKHAVKAAEAAEMIPDGSSLLIGGFMGVGTPHRLVDALVARGAKDMIVIANDTAMPGKGIGKLVTSGCVSKVIASHIGLNPETQQKMISGEIEVDLVPQGTLVERIRAAGVGLGGILTPTGIGTLVEDGKQTVTVNGKNYLLEEPLGGDFALIAAQQADYVGNLEYSLTAHNFNPIMAMAGATVIAEPQTIVPVGVISPDSVKTPGILVDHLLERAH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A887</accession>
    <name>A0A0M7A887_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative small integral membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02566</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70662.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040450871.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02566"/>
    <dbReference type="EnsemblBacteria" id="CTQ70662">
        <property type="protein sequence ID" value="CTQ70662"/>
        <property type="gene ID" value="LAX5112_02566"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018678">
        <property type="entry name" value="DUF2160_TM"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09928">
        <property type="entry name" value="DUF2160"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="51"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="74"/>
            <end position="90"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70662.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="92" mass="10399" checksum="CC9130A534BA789F" modified="2015-12-09" version="1">MLGWMAWTWPTALLFVGIFSAIGFLTVLELKFPGGAERVGILRLTTTRGDRLFITLLGTAYIFLAWLGLVGMPLWWPLAISIGWGFFCFWKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A899</accession>
    <name>A0A0M7A899_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02783</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71328.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02783"/>
    <dbReference type="EnsemblBacteria" id="CTQ71328">
        <property type="protein sequence ID" value="CTQ71328"/>
        <property type="gene ID" value="LAX5112_02783"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="71"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="94"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="119"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="161"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="186"/>
            <end position="210"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="216"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="247"/>
            <end position="269"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="275"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="300"/>
            <end position="319"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="325"/>
            <end position="348"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71328.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="369" mass="39808" checksum="10E08062BAA45DBA" modified="2015-12-09" version="1">MSEASQKLNNKESPLDSARLAAAVSEGILTEDQAERLTDFWTRRGVTGPLAETLPHADIEEVRFVRGFHDIFISLGIGILMVGLIYGLQHLLPAWAISAVGAVSIWGLAEVFSRRMRLALPSFLLSLAFTPFFFMACFGLVVDQDLTGLSLGGWRQNYETWLVIPTSLVALAGAVLFYLRFKVPVGIAGITGGCLFIVAVLIEMAAPGLIDRYHVGFFLALGLVTFGLAMSFDIKDPARVTLNSDKAFWLHLMAAPFIVHSILALVASFSGQGSVGYSVAVIALFVILAIVALIVDRRALLVSAMSYLGFAIGYLILEANVSEEAAFAVTLLLLGGFILLIGSGWSLLRRVLLAPFSGQPLLRYLPATT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8N5</accession>
    <name>A0A0M7A8N5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Peptidase M16 inactive domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_02314</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase M16 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ69994.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671945.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02314"/>
    <dbReference type="EnsemblBacteria" id="CTQ69994">
        <property type="protein sequence ID" value="CTQ69994"/>
        <property type="gene ID" value="LAX5112_02314"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011249">
        <property type="entry name" value="Metalloenz_LuxS/M16"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011765">
        <property type="entry name" value="Pept_M16_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007863">
        <property type="entry name" value="Peptidase_M16_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00675">
        <property type="entry name" value="Peptidase_M16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05193">
        <property type="entry name" value="Peptidase_M16_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63411">
        <property type="entry name" value="SSF63411"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidase_M16" evidence="2">
        <location>
            <begin position="47"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_M16_C" evidence="3">
        <location>
            <begin position="197"/>
            <end position="370"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007261"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00675"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF05193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ69994.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="445" mass="48074" checksum="1D71FB1216017DFE" modified="2015-12-09" version="1">MRLQNAFPAAPALFAFVFAVVALAVRPSFAVEVERVISPKGIEAWLVEDHTVPIIALNFSFEGGSAQDPADKAGLTRLLAATMDEGAGDLTSEDYQARLEELAVSVNFSTGKDRFFGSMRTLTQTLPEATEMLALALNAPRFDVEPVERMKTQLITRAKRNETNQDAIAGLALSKAVFGDHPYAQPTLGTPETLEGLQPDDLKAHKSKLIATDGLKIGVVGAIDAETLKSVLDTVFADLPGKADLKPIEELTPRTGDIVEAFLDVPQTTILLSLPGLKRDDPDYQAAFVMNHILGGGTFTSWMYQEVREKRGLSYGTGTSLSPYKHTGVLIGSASTKAERSNETVDVMLAQLKRMAEEGPTEPELESAKRFLTGSYALRFDSSGKIARQLVALQNAGLGIDYFDRRNSEIEAVTLDDVNRVAQRLLAGVDPTIIQVGPNSPPATD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9N4</accession>
    <name>A0A0M7A9N4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">ATP-dependent protease ATPase subunit HslU</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Unfoldase HslU</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5 8" type="primary">hslU</name>
        <name evidence="8" type="ORF">LAX5112_02784</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">A double ring-shaped homohexamer of HslV is capped on each side by a ring-shaped HslU homohexamer. The assembly of the HslU/HslV complex is dependent on binding of ATP.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the ClpX chaperone family. HslU subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71331.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672336.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02784"/>
    <dbReference type="EnsemblBacteria" id="CTQ71331">
        <property type="protein sequence ID" value="CTQ71331"/>
        <property type="gene ID" value="LAX5112_02784"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009376">
        <property type="term" value="C:HslUV protease complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008233">
        <property type="term" value="F:peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0036402">
        <property type="term" value="F:proteasome-activating activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043335">
        <property type="term" value="P:protein unfolding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00249">
        <property type="entry name" value="HslU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003959">
        <property type="entry name" value="ATPase_AAA_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019489">
        <property type="entry name" value="Clp_ATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004491">
        <property type="entry name" value="HslU"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48102:SF3">
        <property type="entry name" value="PTHR48102:SF3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07724">
        <property type="entry name" value="AAA_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10431">
        <property type="entry name" value="ClpB_D2-small"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01086">
        <property type="entry name" value="ClpB_D2-small"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00390">
        <property type="entry name" value="hslU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 5" id="KW-0143">Chaperone</keyword>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2 5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA" evidence="6">
        <location>
            <begin position="49"/>
            <end position="307"/>
        </location>
    </feature>
    <feature type="domain" description="ClpB_D2-small" evidence="7">
        <location>
            <begin position="326"/>
            <end position="415"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="18"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="60"/>
            <end position="65"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="247"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="312"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="384"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00249"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="SMART" id="SM01086"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ71331.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="434" mass="47967" checksum="22042AD7880B8C1C" modified="2015-12-09" version="1">MTDFSPREIVSELDRYIVGQKDAKRAVAIALRNRWRRQQLEGQMREEVLPKNILMIGPTGVGKTEISRRLAKLARAPFTKVEATKFTEVGYVGRDVEQIVRDLVEAGISLVREEKRESVKAKAHVLAEERVLDALVGANASPATRESFRTKLRDGDMDDKEIEVEVPAQAQMPSFDLPGMPGASVGVMNVSDLLGKAFGGQTKTKRINVRDSHQLLVNAESDKLLDEDKIVEEAISLVENSGIVFLDEIDKICAREGRAGGDVSREGVQRDLLPLIEGTVVSTKHGPVRTDHILFIASGAFHVAKPSDLLPELQGRLPIRVELRALTKEDFRAILTEPEASLIKQYVALMETEGLKLSFTEDSIEEIASVAVDLNGSVENIGARRLQTVMERILDEISFTAPDRSGEEVEITAEFVHENIGDLAKNVDLSKFIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9U7</accession>
    <name>A0A0M7A9U7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Diapolycopene oxygenase</fullName>
            <ecNumber evidence="6">1.14.99.44</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">crtP</name>
        <name evidence="6" type="ORF">LAX5112_02971</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1 3">Carotenoid biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the carotenoid/retinoid oxidoreductase family.</text>
    </comment>
    <dbReference type="EC" id="1.14.99.44" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71915.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672477.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02971"/>
    <dbReference type="EnsemblBacteria" id="CTQ71915">
        <property type="protein sequence ID" value="CTQ71915"/>
        <property type="gene ID" value="LAX5112_02971"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00705"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016117">
        <property type="term" value="P:carotenoid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002937">
        <property type="entry name" value="Amino_oxidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014105">
        <property type="entry name" value="Carotenoid/retinoid_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01593">
        <property type="entry name" value="Amino_oxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02734">
        <property type="entry name" value="crtI_fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3" id="KW-0125">Carotenoid biosynthesis</keyword>
    <keyword evidence="3 6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Amino_oxidase" evidence="5">
        <location>
            <begin position="17"/>
            <end position="499"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="502"/>
            <end position="531"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022746"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU362075"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF01593"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ71915.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="531" mass="56213" checksum="7121A7F5D9901976" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AA76</accession>
    <name>A0A0M7AA76_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Chaperone protein DnaJ</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8 12" type="primary">dnaJ</name>
        <name evidence="12" type="ORF">LAX5112_02779</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="8">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="8">Binds 2 Zn(2+) ions per monomer.</text>
    </comment>
    <comment type="subunit">
        <text evidence="8">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="domain">
        <text evidence="8">The J domain is necessary and sufficient to stimulate DnaK ATPase activity. Zinc center 1 plays an important role in the autonomous, DnaK-independent chaperone activity of DnaJ. Zinc center 2 is essential for interaction with DnaK and for DnaJ activity.</text>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the DnaJ family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71316.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672331.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02779"/>
    <dbReference type="EnsemblBacteria" id="CTQ71316">
        <property type="protein sequence ID" value="CTQ71316"/>
        <property type="gene ID" value="LAX5112_02779"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031072">
        <property type="term" value="F:heat shock protein binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051082">
        <property type="term" value="F:unfolded protein binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006457">
        <property type="term" value="P:protein folding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009408">
        <property type="term" value="P:response to heat"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06257">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd10719">
        <property type="entry name" value="DnaJ_zf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01152">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012724">
        <property type="entry name" value="DnaJ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002939">
        <property type="entry name" value="DnaJ_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001623">
        <property type="entry name" value="DnaJ_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018253">
        <property type="entry name" value="DnaJ_domain_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008971">
        <property type="entry name" value="HSP40/DnaJ_pept-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001305">
        <property type="entry name" value="HSP_DnaJ_Cys-rich_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036410">
        <property type="entry name" value="HSP_DnaJ_Cys-rich_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036869">
        <property type="entry name" value="J_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00226">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01556">
        <property type="entry name" value="DnaJ_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00684">
        <property type="entry name" value="DnaJ_CXXCXGXG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00625">
        <property type="entry name" value="JDOMAIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00271">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46565">
        <property type="entry name" value="SSF46565"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49493">
        <property type="entry name" value="SSF49493"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57938">
        <property type="entry name" value="SSF57938"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02349">
        <property type="entry name" value="DnaJ_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00636">
        <property type="entry name" value="DNAJ_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50076">
        <property type="entry name" value="DNAJ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51188">
        <property type="entry name" value="ZF_CR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 8" id="KW-0143">Chaperone</keyword>
    <keyword evidence="8" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="1 8" id="KW-0235">DNA replication</keyword>
    <keyword evidence="2 8 9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 8" id="KW-0677">Repeat</keyword>
    <keyword evidence="6 8" id="KW-0346">Stress response</keyword>
    <keyword evidence="5 8 9" id="KW-0862">Zinc</keyword>
    <keyword evidence="4 8 9" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="J" evidence="10">
        <location>
            <begin position="5"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="domain" description="CR-type" evidence="11">
        <location>
            <begin position="134"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="repeat" description="CXXCXGXG motif" evidence="8">
        <location>
            <begin position="147"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="repeat" description="CXXCXGXG motif" evidence="8">
        <location>
            <begin position="164"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="repeat" description="CXXCXGXG motif" evidence="8">
        <location>
            <begin position="186"/>
            <end position="193"/>
        </location>
    </feature>
    <feature type="repeat" description="CXXCXGXG motif" evidence="8">
        <location>
            <begin position="200"/>
            <end position="207"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="CR-type" evidence="9">
        <location>
            <begin position="134"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="147"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="150"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="164"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="167"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="186"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="189"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="200"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="203"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>1</label>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01152"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00546"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS51188"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ71316.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="376" mass="40246" checksum="A76B2C8A5BA9F1B5" modified="2015-12-09" version="1">MSKRDFYEVLGVARDADDKALKSAYRKMAMQFHPDRNPGDAEAEAKFKEVNEAYDTLKDGQKRAAYDRFGHAAFENGGFGGGGGAGAHDFSSTMSDIFEEFFGMGGGGRRSGGRERGADLRYNLDVSLEDAFTGKTVEIEVPTSITCDICSGSGAKPGTSPTTCRTCGGAGRVRAAQGFFTLERTCPSCQGKGQVISDPCTGCGGSGRKTQERTLSVNIPAGIEDGTRIRLAGEGEAGARGGPSGDLYIFLSIRPHDLFQRDGADLYCRVPISMSTATLGGQFDVPTVDGATSRVKVPEGTQTGKQFRLRGKGMPIMRSSQHGDMYIQVTVETPTNLTKRQRELLAEFEQEASGENHPASAGFFSKVKDFIDNLST</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAK3</accession>
    <name>A0A0M7AAK3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Alpha-ribazole phosphatase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02825</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71446.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672357.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02825"/>
    <dbReference type="EnsemblBacteria" id="CTQ71446">
        <property type="protein sequence ID" value="CTQ71446"/>
        <property type="gene ID" value="LAX5112_02825"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd07067">
        <property type="entry name" value="HP_PGM_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1240">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018247">
        <property type="entry name" value="EF_Hand_1_Ca_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013078">
        <property type="entry name" value="His_Pase_superF_clade-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029033">
        <property type="entry name" value="His_PPase_superfam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00300">
        <property type="entry name" value="His_Phos_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53254">
        <property type="entry name" value="SSF53254"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00018">
        <property type="entry name" value="EF_HAND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ71446.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="192" mass="21576" checksum="D57098FC39DC8B70" modified="2015-12-09" version="1">MTWCVYLTHPEVEIDPDVPIQEWRLSEIGRDRAALAADLPFAKDFQRIVSSGEVKAVETAEIVGGHLELKPLVLKALHENDRSATGYLAREEFERTADQFFANPDESIRGWERAIDAQMRIVTGIRAVLRSVKEEDPVLFTGHGAVGTLLMCHLMGAPISRAHDQKRGGSWYRFDKDWLTSQSGSSLAWTEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="33" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAT1</accession>
    <name>A0A0M7AAT1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 7">Glutamate decarboxylase</fullName>
            <ecNumber evidence="3 7">4.1.1.15</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">gadB</name>
        <name evidence="8" type="ORF">LAX5112_02853</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>H(+) + L-glutamate = 4-aminobutanoate + CO2</text>
            <dbReference type="Rhea" id="RHEA:17785"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:59888"/>
            <dbReference type="EC" id="4.1.1.15"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 5 6">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the group II decarboxylase family.</text>
    </comment>
    <dbReference type="EC" id="4.1.1.15" evidence="3 7"/>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71526.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672375.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02853"/>
    <dbReference type="EnsemblBacteria" id="CTQ71526">
        <property type="protein sequence ID" value="CTQ71526"/>
        <property type="gene ID" value="LAX5112_02853"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004351">
        <property type="term" value="F:glutamate decarboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006536">
        <property type="term" value="P:glutamate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010107">
        <property type="entry name" value="Glutamate_decarboxylase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002129">
        <property type="entry name" value="PyrdxlP-dep_de-COase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43321">
        <property type="entry name" value="PTHR43321"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00282">
        <property type="entry name" value="Pyridoxal_deC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01788">
        <property type="entry name" value="Glu-decarb-GAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0210">Decarboxylase</keyword>
    <keyword evidence="4 6 8" id="KW-0456">Lyase</keyword>
    <keyword evidence="5 6" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="modified residue" description="N6-(pyridoxal phosphate)lysine" evidence="5">
        <location>
            <position position="274"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000018"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012421"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR602129-50"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU000382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU361171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ71526.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="462" mass="52031" checksum="68078703C8C8E50F" modified="2015-12-09" version="1">MALHQSKPGRRDDVFDLYARDLSEQPLPKFRMPENSSLPDTVYNLIHDELLLDGNSRQNLATFCTTYVPPQAQQLMQDCVDKNMIDQDEYPQTAEIEHRCVHILADLWNAPDAKTTLGCSTTGSSEAAMLGGLALKWKWRKRKEAAGQPADKPNLICGPVQICWHKFARYFDVELRELPILDGELCMTAEQVAEAVDENTIGVVPTLGVTFTGVYEPVEAISKELDRIEAERGLDIPIHVDAASGGFIAPFLHEDVVWDFRLPRVKSINASGHKYGLSPLGVGWAIWREPEDLPEELIFNVDYLGGQVPTFALNFSRPAGEIVAQYYQFLRLGRKGYTDVQGACADTAQYLATELEKTGHFNMLYNGDGGLPAVCYSLKNSTDRGYTLYDVSERLRMRGWQIASYPLPANRHNLIVQRVMVRHGIGRDLMELLIEDMSRTIEFLDRNPMSNREAKASFHHGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AB96</accession>
    <name>A0A0M7AB96_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03163</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72388.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03163"/>
    <dbReference type="EnsemblBacteria" id="CTQ72388">
        <property type="protein sequence ID" value="CTQ72388"/>
        <property type="gene ID" value="LAX5112_03163"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.930">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038301">
        <property type="entry name" value="AraC-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010848">
        <property type="entry name" value="DUF1465"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07323">
        <property type="entry name" value="DUF1465"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ72388.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="180" mass="20112" checksum="9FC79650283A781F" modified="2015-12-09" version="1">MTEDIKTMHRSSDAVHIAHHLASSDNFQTLFQEGMSLVEETALYLDGDGREEAKKLPRPASLAYATESMRLTTRLMQLASWLLLQRAVNEGEMSHEQAGSDKNKVRLDKLSSAMGGPAWDDLPESLRNLVERSTRLQERVVHLDKMLYRAEEAGPQEEANNDNPVASQINQLHAAFGKIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABZ2</accession>
    <name>A0A0M7ABZ2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">O-succinylhomoserine sulfhydrylase</fullName>
            <shortName evidence="2">OSH sulfhydrylase</shortName>
            <shortName evidence="2">OSHS sulfhydrylase</shortName>
            <ecNumber evidence="2">2.5.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2 6" type="primary">metZ</name>
        <name evidence="6" type="ORF">LAX5112_02988</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Catalyzes the formation of L-homocysteine from O-succinyl-L-homoserine (OSHS) and hydrogen sulfide.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>hydrogen sulfide + O-succinyl-L-homoserine = L-homocysteine + succinate</text>
            <dbReference type="Rhea" id="RHEA:27826"/>
            <dbReference type="ChEBI" id="CHEBI:29919"/>
            <dbReference type="ChEBI" id="CHEBI:30031"/>
            <dbReference type="ChEBI" id="CHEBI:57661"/>
            <dbReference type="ChEBI" id="CHEBI:58199"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 2 4">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="2">Amino-acid biosynthesis; L-methionine biosynthesis via de novo pathway; L-homocysteine from O-succinyl-L-homoserine: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Homotetramer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the trans-sulfuration enzymes family. MetZ subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71962.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672490.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02988"/>
    <dbReference type="EnsemblBacteria" id="CTQ71962">
        <property type="protein sequence ID" value="CTQ71962"/>
        <property type="gene ID" value="LAX5112_02988"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00051">
        <property type="reaction ID" value="UER00449"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016765">
        <property type="term" value="F:transferase activity, transferring alkyl or aryl (other than methyl) groups"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071266">
        <property type="term" value="P:'de novo' L-methionine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071268">
        <property type="term" value="P:homocysteine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019346">
        <property type="term" value="P:transsulfuration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00614">
        <property type="entry name" value="CGS_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02056">
        <property type="entry name" value="MetZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000277">
        <property type="entry name" value="Cys/Met-Metab_PyrdxlP-dep_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006234">
        <property type="entry name" value="O-succ-hSer_sulfhydrylase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11808">
        <property type="entry name" value="PTHR11808"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01053">
        <property type="entry name" value="Cys_Met_Meta_PP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001434">
        <property type="entry name" value="CGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01325">
        <property type="entry name" value="O_suc_HS_sulf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="2" id="KW-0486">Methionine biosynthesis</keyword>
    <keyword evidence="2 3 4" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0808">Transferase</keyword>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="modified residue" description="N6-(pyridoxal phosphate)lysine" evidence="2 3">
        <location>
            <position position="214"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02056"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR001434-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU362118"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ71962.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="399" mass="42706" checksum="C42C2175F908AE57" modified="2015-12-09" version="1">MTDTKNTAGTNWRPATALVHGGTTRSPFGETSEAMFLTQGFVYDSAEAAEARFNGEDPGFVYSRYANPTVAMFEDRIKMLEGAEAARATASGMAAVNLALMASVKAGDHVVAAKALFGSCRYICETLLPRFGVESTLIDGTDIDQWKAAVKPNTKALFLESPTNPTLEVIDIAAVAEIAKSVGARLIVDNVFATPMYQSPLSLGADVVIYSATKHIDGQGRCLGGVVLSDEEWITDEVMPFVKHTGPHMSPFSAWVLLKGLETLPLRVAQQTNSAGQIAAFLAGQSKVKRLIYPGRDDHPQAEIAKRQMRGGSTMVALEIEGGKEAAFRFVNALDLIRISNNLGDAKSLITHPATTTHQSIGEEARAELGITDGILRLSVGLEDPQDLLEDVEKALAAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="31" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACC0</accession>
    <name>A0A0M7ACC0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Putative copper-importing P-type ATPase A</fullName>
            <ecNumber evidence="9">3.6.3.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">copA_1</name>
        <name evidence="9" type="ORF">LAX5112_03053</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cell membrane</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IB subfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.-" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72102.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672530.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03053"/>
    <dbReference type="EnsemblBacteria" id="CTQ72102">
        <property type="protein sequence ID" value="CTQ72102"/>
        <property type="gene ID" value="LAX5112_03053"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019829">
        <property type="term" value="F:ATPase-coupled cation transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00371">
        <property type="entry name" value="HMA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023299">
        <property type="entry name" value="ATPase_P-typ_cyto_dom_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018303">
        <property type="entry name" value="ATPase_P-typ_P_site"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023298">
        <property type="entry name" value="ATPase_P-typ_TM_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008250">
        <property type="entry name" value="ATPase_P-typ_transduc_dom_A_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017969">
        <property type="entry name" value="Heavy-metal-associated_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006121">
        <property type="entry name" value="HMA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036163">
        <property type="entry name" value="HMA_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027256">
        <property type="entry name" value="P-typ_ATPase_IB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001757">
        <property type="entry name" value="P_typ_ATPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00403">
        <property type="entry name" value="HMA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55008">
        <property type="entry name" value="SSF55008"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81653">
        <property type="entry name" value="SSF81653"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81665">
        <property type="entry name" value="SSF81665"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01525">
        <property type="entry name" value="ATPase-IB_hvy"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01494">
        <property type="entry name" value="ATPase_P-type"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00154">
        <property type="entry name" value="ATPASE_E1_E2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01047">
        <property type="entry name" value="HMA_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50846">
        <property type="entry name" value="HMA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="4 7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="104"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="140"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="173"/>
            <end position="195"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="201"/>
            <end position="219"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="357"/>
            <end position="376"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="382"/>
            <end position="406"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="682"/>
            <end position="699"/>
        </location>
    </feature>
    <feature type="domain" description="HMA" evidence="8">
        <location>
            <begin position="21"/>
            <end position="87"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006024"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU362081"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50846"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ72102.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="750" mass="79222" checksum="5948ED29A30A10C6" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACI7</accession>
    <name>A0A0M7ACI7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcriptional repressor DicA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02796</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71364.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040452727.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02796"/>
    <dbReference type="EnsemblBacteria" id="CTQ71364">
        <property type="protein sequence ID" value="CTQ71364"/>
        <property type="gene ID" value="LAX5112_02796"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01381">
        <property type="entry name" value="HTH_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00530">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="1">
        <location>
            <begin position="18"/>
            <end position="72"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71364.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="134" mass="14933" checksum="7B3B13515448AD66" modified="2015-12-09" version="1">MPSKKSPNPIDIHVGSRVRLRRMMLGMSQEKLGEALGITFQQIQKYEKGTNRIGASRLQHIATVLKVPVSFFFEDAPGTPEEAEGFGETQPTSYVVDFLSSSEGLSLNKAFVRIEDPKVRRRIVDLVRSLAGDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACW8</accession>
    <name>A0A0M7ACW8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_02873</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the DoxX family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71583.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008193532.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ71583">
        <property type="protein sequence ID" value="CTQ71583"/>
        <property type="gene ID" value="LAX5112_02873"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032808">
        <property type="entry name" value="DoxX"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13564">
        <property type="entry name" value="DoxX_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="47"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="70"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="95"/>
            <end position="112"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ71583.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="118" mass="12196" checksum="690FA0F8427FECFA" modified="2015-12-09" version="1">MTTSLKKYGFWALKGLLAAVFLSAGGAKLVGAPMMVQTFEALGIGQWFRYLTGLIEVVSAVLLFIPGKQAIGAGLLVGTMIGAAAAHLFILGPSVVPALVLGGLTAIVLFVHRDQITA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AD39</accession>
    <name>A0A0M7AD39_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Protease inhibitor Inh</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">LAX5112_02863</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell outer membrane</location>
            <topology evidence="1">Lipid-anchor</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Lipid-anchor</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the rhizobiaceae omp19 lipoprotein family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71554.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672383.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02863"/>
    <dbReference type="EnsemblBacteria" id="CTQ71554">
        <property type="protein sequence ID" value="CTQ71554"/>
        <property type="gene ID" value="LAX5112_02863"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009279">
        <property type="term" value="C:cell outer membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004866">
        <property type="term" value="F:endopeptidase inhibitor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021140">
        <property type="entry name" value="Inh/Omp19"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010571">
        <property type="entry name" value="OM_lipoprot_Omp19_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016085">
        <property type="entry name" value="Protease_inh_b-brl_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02974">
        <property type="entry name" value="Inh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF034005">
        <property type="entry name" value="OM_lipoprot_Omp19_bac"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50882">
        <property type="entry name" value="SSF50882"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0998">Cell outer membrane</keyword>
    <keyword evidence="8" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0564">Palmitate</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 9" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="9">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809245" evidence="9">
        <location>
            <begin position="31"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="domain" description="Inh" evidence="10">
        <location>
            <begin position="88"/>
            <end position="177"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004459"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004635"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007138"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023139"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023237"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF02974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ71554.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="177" mass="17819" checksum="38066ACF492E0E4E" modified="2015-12-09" version="1">MKRAANLGLVVGLVILAAGCQRLSGGPNYAAPLPATPTTPVNSGALQPLDPAVPGTETATAGLDGTTPTTDGAVAAVTPPSNAQQVGRTDLLGGWKLASGADNCMAFMTLTTWSGGYRANTRGCATPVLTGISAWDLNGNQVVLKDGSGQTVAQLYSSQSGRFDGQTATGVPVSLYR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AD47</accession>
    <name>A0A0M7AD47_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Homoserine/homoserine lactone efflux protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">rhtB_6</name>
        <name evidence="6" type="ORF">LAX5112_02900</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71663.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672410.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02900"/>
    <dbReference type="EnsemblBacteria" id="CTQ71663">
        <property type="protein sequence ID" value="CTQ71663"/>
        <property type="gene ID" value="LAX5112_02900"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006865">
        <property type="term" value="P:amino acid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001123">
        <property type="entry name" value="LeuE-type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30086">
        <property type="entry name" value="PTHR30086"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01810">
        <property type="entry name" value="LysE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006324">
        <property type="entry name" value="LeuE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="6"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="39"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="72"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="113"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="146"/>
            <end position="175"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ71663.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="209" mass="22406" checksum="AD36C1132E1A957A" modified="2015-12-09" version="1">MPPFETLLAFFAATALFAYMPGPALLYTAAQTIARGRRAGFLAALGIHMGCYVHVFAAALGLSAIFSVVPSLYFALKLIGGAYLIFLGVQMIRARAESGAIPNLTQKSGRRAMVDSFLVEVLNPKVAVFFIAFLPQFVSPDAALPVWAQFLILGTIVNFAFTSADIVTVLFASEVKKHFTRQSRMQAVTRLAGGSLLVGLGLKLATDRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AD61</accession>
    <name>A0A0M7AD61_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Homospermidine synthase</fullName>
            <ecNumber evidence="3">2.5.1.44</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">hss</name>
        <name evidence="3" type="ORF">LAX5112_03423</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.5.1.44" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ73065.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672820.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03423"/>
    <dbReference type="EnsemblBacteria" id="CTQ73065">
        <property type="protein sequence ID" value="CTQ73065"/>
        <property type="gene ID" value="LAX5112_03423"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047296">
        <property type="term" value="F:homospermidine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.360.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023181">
        <property type="entry name" value="Homospermid_syn-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032095">
        <property type="entry name" value="Sacchrp_dh-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005097">
        <property type="entry name" value="Sacchrp_dh_NADP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16653">
        <property type="entry name" value="Sacchrp_dh_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03435">
        <property type="entry name" value="Sacchrp_dh_NADP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Sacchrp_dh_NADP" evidence="1">
        <location>
            <begin position="1"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="domain" description="Sacchrp_dh_C" evidence="2">
        <location>
            <begin position="145"/>
            <end position="427"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03435"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF16653"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ73065.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="461" mass="51704" checksum="478DD289FEDCAB6B" modified="2015-12-09" version="1">MIGLGSIGKGTLPLIERHFKFDKSRFTVIDPVDTDAKLVTDKGYKFQKVALTPENYEEVLTPLLSEGEGQGFVVNLSVDTSSLDLMKFCRNLGVLYIDTVVEPWPGFYFDDTAKAADRTNYTLRETVRKEKKKNPGGTTAVSCCGANPGMVSWFVKQALVDIATDTGVKFDEPSSQKDWAKLMKKVGVKGIHIAERDTQRAKEPKPMDEFWNTWSVEGFLSEGFQPAELGWGTHETWKPKNAKEHKKGCRAAIYLEQPGASTRVRTWCPTPGPQHGFLVTHNEAISIADYFTLEGGKKLKYRPTCHYAYHPANVAVLSLHELFGSAGKIQEKLHVLDESEIQDGIDELGVLLYGHKKNAYWYGSQLSVEETRKLAPYQNATGLQVTSAVLAGMVWALENPEAGIVETDEMDYKRCLEIQKPYLGPVKGYYTDWTPLDGRPGFYPEDLDTSDPWQFKNILVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AD65</accession>
    <name>A0A0M7AD65_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Probable multidrug resistance protein NorM</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">mdtK</name>
        <name evidence="4" type="ORF">LAX5112_03152</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Multidrug efflux pump.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72356.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672614.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03152"/>
    <dbReference type="EnsemblBacteria" id="CTQ72356">
        <property type="protein sequence ID" value="CTQ72356"/>
        <property type="gene ID" value="LAX5112_03152"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015297">
        <property type="term" value="F:antiporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042910">
        <property type="term" value="F:xenobiotic transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002528">
        <property type="entry name" value="MATE_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01554">
        <property type="entry name" value="MatE"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006603">
        <property type="entry name" value="DinF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00797">
        <property type="entry name" value="matE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="21"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="62"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="104"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="142"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="172"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="204"/>
            <end position="227"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="247"/>
            <end position="278"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="284"/>
            <end position="308"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="329"/>
            <end position="348"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="368"/>
            <end position="385"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="406"/>
            <end position="427"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="433"/>
            <end position="455"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003408"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00020268"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ72356.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="466" mass="50542" checksum="CE08EB4EAB5BF79C" modified="2015-12-09" version="1">MAQRAAGAPDSTKKQTLWQSDILPTLSLGLPLAGAQLAQMAINTTDVLMIGRLGAEELAASVLAFNFYMLLWFFGMGLLQAVIPLAARARGRRQPRELRRAVRMGFWVSVLYCLPIWVLLFFTEELLLLFGQDPELARLANVYMGVLQWTMLPALLIMAVRGFLTVMERTQVVLWATIGGALVNAALDYVLIFGEFGFPRLELIGAGIASVFSATTTFLFLLVYALYHPRLRRYHILGRIWRSDWPVFFQIVRLGTPIAITIVAEGSLFTASAIMIGWLGTIPLAGHGIALQIASLTFMVPVGLSVAAMTRVSLADGRGDSEGVGRAGWTALGVTMTFMGAFAVLFWTVPETLVGLYLDLSDPQSQEVLAYGVSFILVAALFQLADGGQIIGVNNLRGLGDTTIPLFYALFGYWVVGISLSLGLGFLAGWGGVGVWCGLAGGLLSVAILSNARFARREKLGLLQRN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AD92</accession>
    <name>A0A0M7AD92_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Bacterial nodulin-like intrinsic protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">aqpZ</name>
        <name evidence="8" type="ORF">LAX5112_03240</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the MIP/aquaporin (TC 1.A.8) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72601.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672663.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03240"/>
    <dbReference type="EnsemblBacteria" id="CTQ72601">
        <property type="protein sequence ID" value="CTQ72601"/>
        <property type="gene ID" value="LAX5112_03240"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015267">
        <property type="term" value="F:channel activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1080.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023271">
        <property type="entry name" value="Aquaporin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034294">
        <property type="entry name" value="Aquaporin_transptr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000425">
        <property type="entry name" value="MIP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45724">
        <property type="entry name" value="PTHR45724"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00230">
        <property type="entry name" value="MIP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00783">
        <property type="entry name" value="MINTRINSICP"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81338">
        <property type="entry name" value="SSF81338"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="51"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="84"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="125"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="152"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="197"/>
            <end position="217"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU000477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ72601.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="232" mass="24338" checksum="6DBECBF0284D8277" modified="2015-12-09" version="1">MSEFSLSRRLVAEALGTAMLVGTVVGSGIMADNLSEDVAVSLLGNTIPTGAILVVLITLFGPISGAHFNPAVTFVFWLKRELTIPVAAAYVAVQILGGICGSLIAHVMFELPVWQASTTVRTGGAQWVAEVVATFGLLASILAGIRFRADAVPWLVGLYITAAYWFTASTSFANPAVAISRAFTDTFAGIRPVDVPGFIVAQLIGAALALAVFSWLLQSKTPEKEALKPSEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADF8</accession>
    <name>A0A0M7ADF8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Peptidoglycan-associated protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">pal</name>
        <name evidence="12" type="ORF">LAX5112_03197</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.</text>
    </comment>
    <comment type="subunit">
        <text evidence="8">The Tol-Pal system is composed of five core proteins: the inner membrane proteins TolA, TolQ and TolR, the periplasmic protein TolB and the outer membrane protein Pal. They form a network linking the inner and outer membranes and the peptidoglycan layer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the Pal lipoprotein family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72482.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451019.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03197"/>
    <dbReference type="EnsemblBacteria" id="CTQ72482">
        <property type="protein sequence ID" value="CTQ72482"/>
        <property type="gene ID" value="LAX5112_03197"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009279">
        <property type="term" value="C:cell outer membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007049">
        <property type="term" value="P:cell cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd07185">
        <property type="entry name" value="OmpA_C-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02204">
        <property type="entry name" value="Pal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006664">
        <property type="entry name" value="OMP_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006665">
        <property type="entry name" value="OmpA-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006690">
        <property type="entry name" value="OMPA-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036737">
        <property type="entry name" value="OmpA-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039001">
        <property type="entry name" value="Pal"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014169">
        <property type="entry name" value="Pal_lipo_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00691">
        <property type="entry name" value="OmpA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01021">
        <property type="entry name" value="OMPADOMAIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103088">
        <property type="entry name" value="SSF103088"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02802">
        <property type="entry name" value="Pal_lipo"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01068">
        <property type="entry name" value="OMPA_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51123">
        <property type="entry name" value="OMPA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 8" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="1 8" id="KW-0132">Cell division</keyword>
    <keyword evidence="5" id="KW-0998">Cell outer membrane</keyword>
    <keyword evidence="6" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="3 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-0564">Palmitate</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 10" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="10">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809594" description="Peptidoglycan-associated protein" evidence="10">
        <location>
            <begin position="28"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="domain" description="OmpA-like" evidence="11">
        <location>
            <begin position="43"/>
            <end position="160"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023139"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023237"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00473"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS51123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ72482.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="161" mass="17518" checksum="762D7B93BB8F065C" modified="2015-12-09" version="1">MFNMVSASSGARWIAVCFAVLFAAACAQTKPDGLATNVKPGTGQDFVVNVGDRVFFEEDQSTLNSQGQATLANQAKWLSRYSKYTITVEGHADERGTRQYNIALGARRAQAARDYLVSQGVSASRIKTISYGKERPVAVCNDNSCWSQNRRAVTVLNNATN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADK1</accession>
    <name>A0A0M7ADK1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02938</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71813.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672454.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ71813">
        <property type="protein sequence ID" value="CTQ71813"/>
        <property type="gene ID" value="LAX5112_02938"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="41"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="66"/>
            <end position="84"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71813.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="89" mass="9963" checksum="690AEC7070FF1F05" modified="2015-12-09" version="1">MNLLLTWLQSGWLPFGAVLFLWIEFAVLCRFSNAPGERFKLLLANVLAGSCLMASLGFALRGEALFLVLLFLSLALIAHIWDLVTRLRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADU5</accession>
    <name>A0A0M7ADU5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Hemolysin C</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">tlyC_3</name>
        <name evidence="11" type="ORF">LAX5112_03303</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72791.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672725.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03303"/>
    <dbReference type="EnsemblBacteria" id="CTQ72791">
        <property type="protein sequence ID" value="CTQ72791"/>
        <property type="gene ID" value="LAX5112_03303"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd04590">
        <property type="entry name" value="CBS_pair_CorC_HlyC_assoc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.580.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000644">
        <property type="entry name" value="CBS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046342">
        <property type="entry name" value="CBS_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002550">
        <property type="entry name" value="CNNM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044751">
        <property type="entry name" value="Ion_transp-like_CBS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00571">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01595">
        <property type="entry name" value="DUF21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54631">
        <property type="entry name" value="SSF54631"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51371">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51846">
        <property type="entry name" value="CNNM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0129">CBS domain</keyword>
    <keyword evidence="5 7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <keyword evidence="2 7 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="87"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="119"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="domain" description="CNNM transmembrane" evidence="10">
        <location>
            <begin position="1"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="domain" description="CBS" evidence="9">
        <location>
            <begin position="263"/>
            <end position="324"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00703"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51371"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51846"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ72791.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="357" mass="38760" checksum="D5BCE74DC64EF434" modified="2015-12-09" version="1">MTLLILFVVLAIGVSFLCSILEAVLLSITPSFVESANEDRPKLAESLRKLRSDIERPLAAILSLNTIAHTVGATGAGAQAALVFDDAGVGVFSAVLTLAILVLSEIIPKTLGATYWRALAPFAVRVLPWLIAAQLPLVWMSQGITRFLTKGDPKHEVSREEISALATVGNRLGIVEEDETRVVTNLFQLPEISAREVMTPRTVIEHVPEAMSVGEVVKSRESYPFSRMLVTGASIDEVSGFLLTRDLLLTAVNGRNDASVSTLRRDILRISENEDLDSLLEKLMGNDAHIALVQDDYGGTAGLITMEDVLETLLGAEIVDEHDEVEDLQKLARQRGRQTLADRVKSAKDQSEPTKAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEV3</accession>
    <name>A0A0M7AEV3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF2063 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03121</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72273.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672596.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03121"/>
    <dbReference type="EnsemblBacteria" id="CTQ72273">
        <property type="protein sequence ID" value="CTQ72273"/>
        <property type="gene ID" value="LAX5112_03121"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.690">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018640">
        <property type="entry name" value="DUF2063"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044922">
        <property type="entry name" value="DUF2063_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09836">
        <property type="entry name" value="DUF2063"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF2063" evidence="1">
        <location>
            <begin position="14"/>
            <end position="102"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF09836"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72273.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="263" mass="28594" checksum="FB8E8A651443B6BD" modified="2015-12-09" version="1">MAQALSLPRLSTSDFGDALINPELGTPEGAVGPDGLPDMKRFNVYRNNVIVSLCEALGETYPSVKALLGEEYFAALARAFVAEHQPSNPVLIWYGAEFPSFLAAFPPLKAYPYLEDVSRLEWAWLQSYHAKDCEVFDPAALASIPPADLGDVRFWRHPAATIVASEWPIWDLVKVNRFKEAEQSQVDVSVAQPVLIVRPEFDVDVRVLEPSHAAFGSAIFSGASLGEAAETALEIDSGFRLADCLSNFLSNGALAGLQTKEPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AF38</accession>
    <name>A0A0M7AF38_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 4">Protein GrpE</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">HSP-70 cofactor</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3 8" type="primary">grpE</name>
        <name evidence="8" type="ORF">LAX5112_03558</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3 4">Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 3 5">Belongs to the GrpE family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73509.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672928.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03558"/>
    <dbReference type="EnsemblBacteria" id="CTQ73509">
        <property type="protein sequence ID" value="CTQ73509"/>
        <property type="gene ID" value="LAX5112_03558"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000774">
        <property type="term" value="F:adenyl-nucleotide exchange factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051087">
        <property type="term" value="F:chaperone binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042803">
        <property type="term" value="F:protein homodimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006457">
        <property type="term" value="P:protein folding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00446">
        <property type="entry name" value="GrpE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.22.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.20.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01151">
        <property type="entry name" value="GrpE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000740">
        <property type="entry name" value="GrpE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013805">
        <property type="entry name" value="GrpE_coiled_coil"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009012">
        <property type="entry name" value="GrpE_head"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21237">
        <property type="entry name" value="PTHR21237"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01025">
        <property type="entry name" value="GrpE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00773">
        <property type="entry name" value="GRPEPROTEIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51064">
        <property type="entry name" value="SSF51064"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF58014">
        <property type="entry name" value="SSF58014"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01071">
        <property type="entry name" value="GRPE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3 4" id="KW-0143">Chaperone</keyword>
    <keyword evidence="6" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0346">Stress response</keyword>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="185"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="6">
        <location>
            <begin position="37"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01151"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU000639"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU004478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ73509.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="211" mass="23058" checksum="1AF26762BCC073DE" modified="2015-12-09" version="1">MSEENKSPDNQPDRLKPEAEAVNEAAAAAEESAVDPVEALMAENAELKDRALRTMAEMENLRRRTEKEVKDARQYAVSGFARDMLTVSDNLSRALEALPEDDRKNADAGVASLIEGVEMIERDLLNQLEKNGVRKLEPEGQKFDPNFHQAMFEVPNTEVPNNTVVQVVQAGYVIGERVLRPAMVGVSKGGPKETPKADAGTEPGETVDKSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AF88</accession>
    <name>A0A0M7AF88_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Polar organelle development protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">podJ_2</name>
        <name evidence="2" type="ORF">LAX5112_03172</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72413.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008197261.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03172"/>
    <dbReference type="EnsemblBacteria" id="CTQ72413">
        <property type="protein sequence ID" value="CTQ72413"/>
        <property type="gene ID" value="LAX5112_03172"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006597">
        <property type="entry name" value="Sel1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08238">
        <property type="entry name" value="Sel1"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="SMART" id="SM00671">
        <property type="entry name" value="SEL1"/>
        <property type="match status" value="6"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809284" evidence="1">
        <location>
            <begin position="35"/>
            <end position="370"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72413.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="370" mass="39029" checksum="5A2759327C1008B0" modified="2015-12-09" version="1">MDKLITTPVVRQTTAAAFVSAALFGLPSAASAQAETPAADISAVEAPGTAKLPALVDVTTRDKTIASLIDSGPPSLADGETASSNTAYSAFQRGWHLTALALATPLAENGDRSAQALLGVLHEAGLGIKQDKAKAADWYGLAAAQGDNGSALQLAQLYLLGDAIPQDKAKAAELFEQAAEADNPSALYNLAILYKEGEGRPYNEEKARELLEEAAQLNDPEAQYTLALAYLESGDGLNDPGKGAFWMGRAARRGHTFAQVYYGILRFQGRGVDPDESEAADWFERAATAGNPVAMNRLARVYAYGRGREHDNAAAAGWHLIARTLGVSDPTLDGIFGTLDDETLAAARKLAEQYSATLMAPSDESYLNSP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFB3</accession>
    <name>A0A0M7AFB3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Tricarballylate utilization protein B</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03430</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73122.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672840.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03430"/>
    <dbReference type="EnsemblBacteria" id="CTQ73122">
        <property type="protein sequence ID" value="CTQ73122"/>
        <property type="gene ID" value="LAX5112_03430"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012830">
        <property type="entry name" value="Citrate_utilization_prot_B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036197">
        <property type="entry name" value="NarG-like_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103501">
        <property type="entry name" value="SSF103501"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02484">
        <property type="entry name" value="CitB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="101"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="139"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="214"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="247"/>
            <end position="267"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="288"/>
            <end position="306"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="312"/>
            <end position="332"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73122.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="356" mass="39230" checksum="2F90B9F95B37376C" modified="2015-12-09" version="1">MQTDLLQEARRQAEICNACRYCEGYCSVFPALHQERFFTDGNLTQLANLCHNCRGCYYACQYTAPHEFDLNLPKALAEVRQDSWESFAWPHPLAQIFQKNGVMIAVATVLGFAVLFLAMRTLGSAGGEGFYAVLSHNAMVAIFLPAFLFPLFSIAISLRRYWEGTDGKRITLAHIVGAFGSAANMKNLAGGHGDGCNFEDEDKFSNARRLAHQAVMYGFLLCFAATSAGTILHYAFNMPAPYPLWSFPKLLGVPGGILMVLGTVELARLKLKADRNLGASSAWGGEMGFVLLLFLVALSGLLLYWLGGTQLMPLMLAIHLGSVLSFFLLTPYTKMAHGFYRLAALIRDEQRKAALE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFB4</accession>
    <name>A0A0M7AFB4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">3-oxoadipate enol-lactonase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03504</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73327.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672879.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ73327">
        <property type="protein sequence ID" value="CTQ73327"/>
        <property type="gene ID" value="LAX5112_03504"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000073">
        <property type="entry name" value="AB_hydrolase_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12697">
        <property type="entry name" value="Abhydrolase_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AB hydrolase-1" evidence="1">
        <location>
            <begin position="6"/>
            <end position="245"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12697"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73327.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="261" mass="29113" checksum="37DF88CE32C9D9F5" modified="2015-12-09" version="1">MYDIPVVLLHGTNAGPWTMELFKKFFEQAGFACHAPTYRFHDLADGEERRKALIGISIQDYVSDTVEFIRALDRPPIVIGHSLGGLIAQILSGRGLIEAGVLINSSIMAGTTPTTDMERALGKMFMSAGAFWQEAPGQGFELLAAYGLNTMPEIHQHEICDRLSTESGEVLFELFFWMYDQKQATQVAFDGRNAPMLFLTGGEDKVVPPSTARQMAARYGDLAAVQEYPGKCHYMQLEDGWQELASNSLEWIRETVIRKNI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFR6</accession>
    <name>A0A0M7AFR6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF2384 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03549</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73451.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672924.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ73451">
        <property type="protein sequence ID" value="CTQ73451"/>
        <property type="gene ID" value="LAX5112_03549"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024467">
        <property type="entry name" value="Xre/MbcA/ParS-like_toxin-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09722">
        <property type="entry name" value="DUF2384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF2384" evidence="1">
        <location>
            <begin position="86"/>
            <end position="135"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF09722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73451.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="137" mass="15691" checksum="014EBD7640BDCD10" modified="2015-12-09" version="1">MNLQPITSTPAHAQNPVITDDEAGALARATINLFKSWGLSDAQSRTLLGDMSQSTWDRWKRGDIGRVDRDRKMRMAHLMGIHKGIRHLFNEPKRGYAWVKKENDAFEGKSALDVMLRGEMSDLESLRRWLNAERGVW</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGL9</accession>
    <name>A0A0M7AGL9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03585</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73582.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451367.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03585"/>
    <dbReference type="EnsemblBacteria" id="CTQ73582">
        <property type="protein sequence ID" value="CTQ73582"/>
        <property type="gene ID" value="LAX5112_03585"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd05804">
        <property type="entry name" value="StaR_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_repeat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033891">
        <property type="entry name" value="TTC38"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR16263">
        <property type="entry name" value="PTHR16263"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="SSF48452"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50005">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <keyword evidence="2" id="KW-0802">TPR repeat</keyword>
    <feature type="repeat" description="TPR" evidence="2">
        <location>
            <begin position="236"/>
            <end position="269"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00339"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ73582.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="461" mass="50971" checksum="2B141FCC7D54BEA3" modified="2015-12-09" version="1">MRLSDQFGYDLTLTSPAAAEAWDKTVLAFLAHGKTTPAHLETCLTEEPNFALGHATRGLFCLLLGRKELVETARECLSIARSSAANSSVTERETAMVEALAAWLNGFPSRSADLLDAALLKTPRDALLLKLVHAIRFVLGDATGMRSSIDGVFDAYDPQNPAYGYVLGCRAFSLEETGEYRFAEAAGRLGLEHARDDAWGLHAVAHVHDMTGRTEEGAGWLENHPDGWAHCNNFGYHVWWHLALMYLDQGQAEKALMLYDRDIRKDKTDDYRDISNAASLLARLELEGIDIGSRWDELALISDKRAEDGCNVFADLHYLMALLNGGRRMGADRLIAGLKQRADQETDIGHVSSEAGLPAGLGLEQYRKGNYASAFTLLTSARSNMPRIGGSHAQRDVFERITIDAALRAGLPVEAETLIKDRSRKRGALDRFAEQRLETCQKMRRAEKVMQADSLRATNSY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AH62</accession>
    <name>A0A0M7AH62_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">H+ Antiporter protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">LAX5112_03694</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ73921.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673035.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03694"/>
    <dbReference type="EnsemblBacteria" id="CTQ73921">
        <property type="protein sequence ID" value="CTQ73921"/>
        <property type="gene ID" value="LAX5112_03694"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024671">
        <property type="entry name" value="Atg22-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11700">
        <property type="entry name" value="ATG22"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="17"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="57"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="88"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="114"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="155"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="204"/>
            <end position="224"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="257"/>
            <end position="283"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="289"/>
            <end position="310"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="322"/>
            <end position="341"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="368"/>
            <end position="391"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="403"/>
            <end position="428"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="434"/>
            <end position="453"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="6">
        <location>
            <begin position="1"/>
            <end position="457"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ73921.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="460" mass="48633" checksum="E60B7F96F31F3119" modified="2015-12-09" version="1">MTAAPDIAFKNPGRRAVVAWGFFDWAAQPFFTLITTFVFAPYFASALADNPTEGQSLWGYATAAAGLGIAFLAPILGSVADATGRRKVWIFCFSIPFVICCWAFWYAAPGNPNAVMIALVAFAIGTLSIEIATVFNNAMMPKLVPSTHIGRLSSFGWALGYASGLVTLVLVLGFLAANPDTGRTLLGFTPLFGLDAATYEGDRASGPFSAIWYLIFALPMFLFVPDAPSGGKIGAAVSKGLTDLQHSLRHARQNRNIFLFLLANMVFKDGLVALFAFGGIYAAGQLGWGSIQIGTFGIILTITGTLGLLLSGKVDDRFGPKIVIAFSLIVLMICGLGMISVDRTTVFFFIQTPAASEGALFASLPEQIFITLGAIIGAVSGPLQASCRSLLIQLAPKELMTQYFGLLALSGKVTSFLAPLTVAVVTAAADSQPAGMSVILIFFAAGLVLLMMVKEKRAGQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHF7</accession>
    <name>A0A0M7AHF7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">7-carboxy-7-deazaguanine synthase</fullName>
            <shortName evidence="5">CDG synthase</shortName>
            <ecNumber evidence="5">4.3.99.3</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Queuosine biosynthesis protein QueE</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5 7" type="primary">queE</name>
        <name evidence="7" type="ORF">LAX5112_03673</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>6-carboxy-5,6,7,8-tetrahydropterin + H(+) = 7-carboxy-7-deazaguanine + NH4(+)</text>
            <dbReference type="Rhea" id="RHEA:27974"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="ChEBI" id="CHEBI:61032"/>
            <dbReference type="ChEBI" id="CHEBI:61036"/>
            <dbReference type="EC" id="4.3.99.3"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="5">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="5">
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </cofactor>
        <text evidence="5">Binds 1 S-adenosyl-L-methionine per subunit.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="5">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
        <text evidence="5">Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.</text>
    </comment>
    <comment type="pathway">
        <text evidence="5">Purine metabolism; 7-cyano-7-deazaguanine biosynthesis.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the radical SAM superfamily. 7-carboxy-7-deazaguanine synthase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="4.3.99.3" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ73862.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03673"/>
    <dbReference type="EnsemblBacteria" id="CTQ73862">
        <property type="protein sequence ID" value="CTQ73862"/>
        <property type="gene ID" value="LAX5112_03673"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00391"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016840">
        <property type="term" value="F:carbon-nitrogen lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:1904047">
        <property type="term" value="F:S-adenosyl-L-methionine binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008616">
        <property type="term" value="P:queuosine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00917">
        <property type="entry name" value="QueE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024924">
        <property type="entry name" value="7-CO-7-deazaguanine_synth-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017742">
        <property type="entry name" value="Deazaguanine_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007197">
        <property type="entry name" value="rSAM"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04055">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000370">
        <property type="entry name" value="QueE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00029">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03365">
        <property type="entry name" value="Bsubt_queE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51918">
        <property type="entry name" value="RADICAL_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="3 5" id="KW-0408">Iron</keyword>
    <keyword evidence="4 5" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="5 7" id="KW-0456">Lyase</keyword>
    <keyword evidence="5" id="KW-0460">Magnesium</keyword>
    <keyword evidence="2 5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-0671">Queuosine biosynthesis</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 5" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <feature type="domain" description="Radical SAM core" evidence="6">
        <location>
            <begin position="1"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="region of interest" description="S-adenosyl-L-methionine binding" evidence="5">
        <location>
            <begin position="12"/>
            <end position="14"/>
        </location>
    </feature>
    <feature type="region of interest" description="S-adenosyl-L-methionine binding" evidence="5">
        <location>
            <begin position="98"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="2"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="6"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <note>4Fe-4S-S-AdoMet</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="10"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <note>4Fe-4S-S-AdoMet</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="13"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <note>4Fe-4S-S-AdoMet</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="15"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="53"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="55"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ73862.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="213" mass="23508" checksum="357D98148563517D" modified="2015-12-09" version="1">MRTGGCDYRCSWCDTLHAVDSAYRDDWHPMTPQAILMQIEILSGGKPLMVSLSGGNPAIQPLGSLIELGKREGYRFALETQGSIAKDWFAALDVLTLSPKPPSSGMDTDWQKLAECVEAAGSETQTVLKTVIFDDADYDYAKDLAARYPELPLYLQPGNHTPPSPATADAPIDMPGIMDRMRWLVDKVAGDRWYTPTVLPQLHTLIWGNLRGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHM5</accession>
    <name>A0A0M7AHM5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Ribosomal RNA small subunit methyltransferase B</fullName>
            <ecNumber evidence="8">2.1.1.176</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">rsmB_1</name>
        <name evidence="8" type="ORF">LAX5112_03698</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="5">Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.176" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ73932.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673130.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03698"/>
    <dbReference type="EnsemblBacteria" id="CTQ73932">
        <property type="protein sequence ID" value="CTQ73932"/>
        <property type="gene ID" value="LAX5112_03698"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0001510">
        <property type="term" value="P:RNA methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.940.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001678">
        <property type="entry name" value="MeTrfase_RsmB/NOP2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035926">
        <property type="entry name" value="NusB-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006027">
        <property type="entry name" value="NusB_RsmB_TIM44"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023267">
        <property type="entry name" value="RCMT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22807">
        <property type="entry name" value="PTHR22807"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01189">
        <property type="entry name" value="Methyltr_RsmB-F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01029">
        <property type="entry name" value="NusB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR02008">
        <property type="entry name" value="RCMTFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48013">
        <property type="entry name" value="SSF48013"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51686">
        <property type="entry name" value="SAM_MT_RSMB_NOP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 5 8" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="3 5" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="2 5 8" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="SAM_MT_RSMB_NOP" evidence="7">
        <location>
            <begin position="173"/>
            <end position="458"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="region of interest" description="S-adenosyl-L-methionine binding" evidence="5">
        <location>
            <begin position="269"/>
            <end position="275"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="5">
        <location>
            <position position="385"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="290"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="316"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="332"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51686"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ73932.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="458" mass="49405" checksum="0D4225BC65010039" modified="2015-12-09" version="1">MSKLPKKNNKPSNGAPAERLEKPGFAARKVAADILGNVVHKKRPLDGELDMASGHSGFRALAANDRALVRAIAGAALRHRGEIREILGRLLDRDIPEKTGRVLDILHVAIAQMQFLDIPDRAAVSLAVDHASMDRRARPYKGLVNGVLRRLGRERDEITSDLDAPRLNTPDWLWESWQAAYGEEGARAIAKAHEREAALDLTVKADAAAWAEKLDGVVVGAGSVRLTKKGAVDALEGFEDGAWWVQDAAASLPAKLLGDVSGKQVADLCAAPGGKTAQLAAVGAEITAIDISRARLKRLAENMTRLGLSVTTVAADLREFEPEALFEAILLDAPCSATGTIRRHPDVPWIKKPYDIEKLSEIQTALLDRVMSWLKPGGVLVYCTCSLERAEGEGQAEAFLERNKDRVSLVPVDASEIGGLAESVTPEGYLRCRPDQSAGPETGLFGIDGFFAARFRVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AI87</accession>
    <name>A0A0M7AI87_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">SH3b domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_04006</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74855.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04006"/>
    <dbReference type="EnsemblBacteria" id="CTQ74855">
        <property type="protein sequence ID" value="CTQ74855"/>
        <property type="gene ID" value="LAX5112_04006"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003646">
        <property type="entry name" value="SH3-like_bac-type"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08239">
        <property type="entry name" value="SH3_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00287">
        <property type="entry name" value="SH3b"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51781">
        <property type="entry name" value="SH3B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809464" description="SH3b domain-containing protein" evidence="1">
        <location>
            <begin position="22"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="domain" description="SH3b" evidence="2">
        <location>
            <begin position="26"/>
            <end position="89"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51781"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ74855.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="133" mass="14363" checksum="43CD04E47BFC226C" modified="2015-12-09" version="1">MLNRFAMALASAVLTITPALAQSGGPAIAYTTANLNMRAGPGTNYPVLTTLPQGAGVTVFGCTADFQWCDAAFTTVKGWVSGKYLSYGVQGRYYGQPIPRSGIYVGVPRYQQNYPVYGRGPVRVQPLPGYRRY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AII8</accession>
    <name>A0A0M7AII8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04030</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ74908.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673321.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04030"/>
    <dbReference type="EnsemblBacteria" id="CTQ74908">
        <property type="protein sequence ID" value="CTQ74908"/>
        <property type="gene ID" value="LAX5112_04030"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032347">
        <property type="entry name" value="DUF4864"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16156">
        <property type="entry name" value="DUF4864"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809516" evidence="1">
        <location>
            <begin position="30"/>
            <end position="144"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74908.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="144" mass="15863" checksum="065CF083E206BC68" modified="2015-12-09" version="1">MAASYFRKYAAGAVFGAALAFGSVSPGLAADTSVFQSIIKNQMSAFAADDAKMAFSFATRTLQQRFQTPEFFMQMVKSGYQPVYRPKDVTFGQSKMTKFGPTQEVYVTGPKGQNWLALYSFEEQEDGSWRISGCYLTKSDGFAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIY3</accession>
    <name>A0A0M7AIY3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03843</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74376.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74376">
        <property type="protein sequence ID" value="CTQ74376"/>
        <property type="gene ID" value="LAX5112_03843"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ74376.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="49" mass="5422" checksum="72EBCB5666B769E6" modified="2015-12-09" version="1">MFDRSGEMRLSSLGLLLILAACVMTLFIQPSPQYQVDPQTVGAFFGRSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJB5</accession>
    <name>A0A0M7AJB5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">EF hand</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03893</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74532.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673198.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03893"/>
    <dbReference type="EnsemblBacteria" id="CTQ74532">
        <property type="protein sequence ID" value="CTQ74532"/>
        <property type="gene ID" value="LAX5112_03893"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011992">
        <property type="entry name" value="EF-hand-dom_pair"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018247">
        <property type="entry name" value="EF_Hand_1_Ca_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002048">
        <property type="entry name" value="EF_hand_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13202">
        <property type="entry name" value="EF-hand_5"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47473">
        <property type="entry name" value="SSF47473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00018">
        <property type="entry name" value="EF_HAND_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50222">
        <property type="entry name" value="EF_HAND_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809395" evidence="1">
        <location>
            <begin position="22"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="domain" description="EF-hand" evidence="2">
        <location>
            <begin position="45"/>
            <end position="80"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50222"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ74532.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="147" mass="16056" checksum="0BE517A16FBB24DE" modified="2015-12-09" version="1">MDRKLVLTLVAGVLASTHVWAADDAGASFMERWDVNNDGVVSIEEAEKRRQALFAKLDTNKDGFLDSNEFSADAQVEPETQSADTSVLMGLDLNDVDGDGKVSAGEFMSNSGTWVDLMDENKDGVVSAEEFQTKWHDRDARIKLLGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJP3</accession>
    <name>A0A0M7AJP3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">tRNA N6-adenosine threonylcarbamoyltransferase</fullName>
            <ecNumber evidence="6">2.3.1.234</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">N6-L-threonylcarbamoyladenine synthase</fullName>
            <shortName evidence="6">t(6)A synthase</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">tRNA threonylcarbamoyladenosine biosynthesis protein TsaD</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9" type="primary">gcp</name>
        <name evidence="6" type="synonym">tsaD</name>
        <name evidence="9" type="ORF">LAX5112_03968</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 6">
            <text>adenosine(37) in tRNA + L-threonylcarbamoyladenylate = AMP + H(+) + N(6)-L-threonylcarbamoyladenosine(37) in tRNA</text>
            <dbReference type="Rhea" id="RHEA:37059"/>
            <dbReference type="Rhea" id="RHEA-COMP:10162"/>
            <dbReference type="Rhea" id="RHEA-COMP:10163"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:73682"/>
            <dbReference type="ChEBI" id="CHEBI:74411"/>
            <dbReference type="ChEBI" id="CHEBI:74418"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="2.3.1.234"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>Fe(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29033"/>
        </cofactor>
        <text evidence="6">Binds 1 Fe(2+) ion per subunit.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the KAE1 / TsaD family.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.234" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74771.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673266.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03968"/>
    <dbReference type="EnsemblBacteria" id="CTQ74771">
        <property type="protein sequence ID" value="CTQ74771"/>
        <property type="gene ID" value="LAX5112_03968"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061711">
        <property type="term" value="F:N(6)-L-threonylcarbamoyladenine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0002949">
        <property type="term" value="P:tRNA threonylcarbamoyladenosine modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01445">
        <property type="entry name" value="TsaD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000905">
        <property type="entry name" value="Gcp-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017861">
        <property type="entry name" value="KAE1/TsaD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022450">
        <property type="entry name" value="TsaD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11735">
        <property type="entry name" value="PTHR11735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11735:SF6">
        <property type="entry name" value="PTHR11735:SF6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00814">
        <property type="entry name" value="TsaD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00789">
        <property type="entry name" value="OSIALOPTASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="SSF53067"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00329">
        <property type="entry name" value="gcp_kae1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03723">
        <property type="entry name" value="T6A_TsaD_YgjD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6" id="KW-0408">Iron</keyword>
    <keyword evidence="4 6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0808">Transferase</keyword>
    <keyword evidence="3 6" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="TsaD" evidence="8">
        <location>
            <begin position="37"/>
            <end position="327"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="6">
        <location>
            <begin position="147"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="345"/>
            <end position="368"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="125"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="129"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="180"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="193"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="197"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="292"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="320"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001866"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01445"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00814"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ74771.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="368" mass="39082" checksum="474F17AF1455044C" modified="2015-12-09" version="1">MTFVNENRADTRLTVLGIETSCDETAAAVVRGPLDKNILSNVIRSQIDEHTEFGGVVPEIAARAHIEILDRIVAEALQESKCSWDDIDAVAATAGPGLIGGVIVGFMTAKAIAMAAGKPLVGVNHLEGHALTARLTDDLDFPFLLLLVSGGHSQFLLVRGVGDYERLGTTIDDAIGEAFDKTAKLLGLPYPGGPHVEKMAKKGDVTRFKLPRPLLDRPGLDMSFAGLKTALRTQAKKLEPVDDQTVADLCAAFQRAVADVLAARTKSALDLFRERYPETIPSIVVAGGVAANQEIRGSLLSAADEAGARFIAPPMALCTDNAAMIAWAGIERLRQGPVDDMKLPPRPRWPLDQSNAGVLGAGKKGAKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJV2</accession>
    <name>A0A0M7AJV2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04213</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75398.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673453.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000021.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75398">
        <property type="protein sequence ID" value="CTQ75398"/>
        <property type="gene ID" value="LAX5112_04213"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809698" evidence="1">
        <location>
            <begin position="26"/>
            <end position="140"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75398.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="140" mass="14897" checksum="D2146B0CEAFA39EA" modified="2015-12-09" version="1">MKPAQLFGPALTAAFLLSAGSPALAMSGFENSDTTAACPPHRVTIENRSSGPIEIRQVMWLNSDETGWISQDVRAESIAPGGDWSGDVSLTGLSGSKTFVKARYQIQGTADVSTPELTSERAIPSCQTTLESVLRVVDKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJZ3</accession>
    <name>A0A0M7AJZ3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">Dual-specificity RNA methyltransferase RlmN</fullName>
            <ecNumber evidence="13">2.1.1.192</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="13">23S rRNA (adenine(2503)-C(2))-methyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="13">23S rRNA m2A2503 methyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="13">Ribosomal RNA large subunit methyltransferase N</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="13">tRNA (adenine(37)-C(2))-methyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="13">tRNA m2A37 methyltransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="13 15" type="primary">rlmN</name>
        <name evidence="15" type="ORF">LAX5112_04015</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="13">Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="13">
            <text>adenosine(2503) in 23S rRNA + 2 reduced [2Fe-2S]-[ferredoxin] + 2 S-adenosyl-L-methionine = 2-methyladenosine(2503) in 23S rRNA + 5'-deoxyadenosine + L-methionine + 2 oxidized [2Fe-2S]-[ferredoxin] + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:42916"/>
            <dbReference type="Rhea" id="RHEA-COMP:10000"/>
            <dbReference type="Rhea" id="RHEA-COMP:10001"/>
            <dbReference type="Rhea" id="RHEA-COMP:10152"/>
            <dbReference type="Rhea" id="RHEA-COMP:10282"/>
            <dbReference type="ChEBI" id="CHEBI:17319"/>
            <dbReference type="ChEBI" id="CHEBI:33737"/>
            <dbReference type="ChEBI" id="CHEBI:33738"/>
            <dbReference type="ChEBI" id="CHEBI:57844"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:74411"/>
            <dbReference type="ChEBI" id="CHEBI:74497"/>
            <dbReference type="EC" id="2.1.1.192"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="13">
            <text>adenosine(37) in tRNA + 2 reduced [2Fe-2S]-[ferredoxin] + 2 S-adenosyl-L-methionine = 2-methyladenosine(37) in tRNA + 5'-deoxyadenosine + L-methionine + 2 oxidized [2Fe-2S]-[ferredoxin] + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:43332"/>
            <dbReference type="Rhea" id="RHEA-COMP:10000"/>
            <dbReference type="Rhea" id="RHEA-COMP:10001"/>
            <dbReference type="Rhea" id="RHEA-COMP:10162"/>
            <dbReference type="Rhea" id="RHEA-COMP:10485"/>
            <dbReference type="ChEBI" id="CHEBI:17319"/>
            <dbReference type="ChEBI" id="CHEBI:33737"/>
            <dbReference type="ChEBI" id="CHEBI:33738"/>
            <dbReference type="ChEBI" id="CHEBI:57844"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:74411"/>
            <dbReference type="ChEBI" id="CHEBI:74497"/>
            <dbReference type="EC" id="2.1.1.192"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="13">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
        <text evidence="13">Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 13">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="miscellaneous">
        <text evidence="13">Reaction proceeds by a ping-pong mechanism involving intermediate methylation of a conserved cysteine residue.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 13">Belongs to the radical SAM superfamily. RlmN family.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.192" evidence="13"/>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74871.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673316.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04015"/>
    <dbReference type="EnsemblBacteria" id="CTQ74871">
        <property type="protein sequence ID" value="CTQ74871"/>
        <property type="gene ID" value="LAX5112_04015"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070040">
        <property type="term" value="F:rRNA (adenine-C2-)-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0002935">
        <property type="term" value="F:tRNA (adenine-C2-)-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070475">
        <property type="term" value="P:rRNA base methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01849">
        <property type="entry name" value="RNA_methyltr_RlmN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040072">
        <property type="entry name" value="Methyltransferase_A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027492">
        <property type="entry name" value="RNA_MTrfase_RlmN"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004383">
        <property type="entry name" value="rRNA_lsu_MTrfase_RlmN/Cfr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007197">
        <property type="entry name" value="rSAM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30544">
        <property type="entry name" value="PTHR30544"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04055">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006004">
        <property type="entry name" value="CHP00048"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDF00275">
        <property type="entry name" value="adenosine_C2_methyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00048">
        <property type="entry name" value="rRNA_mod_RlmN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51918">
        <property type="entry name" value="RADICAL_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 13" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="4 13" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="12 13" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="10 13" id="KW-0408">Iron</keyword>
    <keyword evidence="11 13" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="9 13" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6 13 15" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 13" id="KW-0698">rRNA processing</keyword>
    <keyword evidence="8 13" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="7 13 15" id="KW-0808">Transferase</keyword>
    <keyword evidence="13" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="Radical SAM core" evidence="14">
        <location>
            <begin position="134"/>
            <end position="381"/>
        </location>
    </feature>
    <feature type="region of interest" description="S-adenosyl-L-methionine binding" evidence="13">
        <location>
            <begin position="212"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="region of interest" description="S-adenosyl-L-methionine binding" evidence="13">
        <location>
            <begin position="266"/>
            <end position="268"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="13">
        <location>
            <position position="128"/>
        </location>
    </feature>
    <feature type="active site" description="S-methylcysteine intermediate" evidence="13">
        <location>
            <position position="386"/>
        </location>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="148"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <note>4Fe-4S-S-AdoMet</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="152"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <note>4Fe-4S-S-AdoMet</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="155"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <note>4Fe-4S-S-AdoMet</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="244"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <position position="343"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007544"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS51918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="CTQ74871.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="412" mass="45717" checksum="79A0C0FDA6516141" modified="2015-12-09" version="1">MAVTLDIARENPNAQTVTGIAPNSGPDEDKPTLIGLSREELGEALGTIGVPQKQWRMRSSQLWHWLYVRGVSDFAEMTNIAKDLRSKLDEAFTIARPKIVSEQISVDGTRKWLFQFPPRGAGNPVEVETVYIPEEGRGTLCVSSQVGCTLTCTFCHTGTQKLVRNLTSEEILSQILIARDRLGDFPDAHTPQGAIVPSEGRLVTNIVMMGMGEPLYNFEKVKKALLIASDGDGLSLSKRRITLSTSGVVPEIFRTGDEIGCMLAISLHAVRDEDRDILVPINKKWNIKELLDACRNYPGLSNAKRITFEYVMLKDINDSNEDALELVRLLKGIPAKINLIPFNPWPGSQYACSDWERIEEFADIVNRAGYASPIRTPRGRDIFAACGQLKSASERMRKKDRDALAAKKAAVY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AME3</accession>
    <name>A0A0M7AME3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Transcriptional repressor PaaX</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">paaX</name>
        <name evidence="3" type="ORF">LAX5112_04054</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ74953.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04054"/>
    <dbReference type="EnsemblBacteria" id="CTQ74953">
        <property type="protein sequence ID" value="CTQ74953"/>
        <property type="gene ID" value="LAX5112_04054"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006351">
        <property type="term" value="P:transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012906">
        <property type="entry name" value="PaaX-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013225">
        <property type="entry name" value="PaaX_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011965">
        <property type="entry name" value="PaaX_trns_reg"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07848">
        <property type="entry name" value="PaaX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08223">
        <property type="entry name" value="PaaX_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF020623">
        <property type="entry name" value="PaaX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PaaX" evidence="1">
        <location>
            <begin position="49"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="domain" description="PaaX_C" evidence="2">
        <location>
            <begin position="193"/>
            <end position="282"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07848"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF08223"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ74953.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="311" mass="33784" checksum="3E6C7BBA217701D0" modified="2015-12-09" version="1">MTFAGSGRLLGMLRCQVYGGANQTNDQSMTSPAPIFLPKLLPSYPPKAGPLIVTIYGDIVEPRGGTLWMGDLITLCGQFGVNESLVRTAVSRLVARGQLEGARNGRRSYYRLTDAAGIEFQSASEQIFGPPDSDCDLLFIVQPDRTDHQGLADQGFGAVSETLFVGADRPSSIKSGACFKACPDQRSAKEVAEMLNKVFGLDQLAARYRSFYKRIEALDCFGLSGLEAVTVRLAMVHEFRAIRLKDPRLPPSVLPVDWDGLSARRLFAEKYLELSETADPFIGSSLTGQGGALEDKTGPILKRLSSLRSRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMI1</accession>
    <name>A0A0M7AMI1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Flp pilus assembly protein TadG</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_04466</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ76099.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04466"/>
    <dbReference type="EnsemblBacteria" id="CTQ76099">
        <property type="protein sequence ID" value="CTQ76099"/>
        <property type="gene ID" value="LAX5112_04466"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.410">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028087">
        <property type="entry name" value="Tad_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036465">
        <property type="entry name" value="vWFA_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13400">
        <property type="entry name" value="Tad"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53300">
        <property type="entry name" value="SSF53300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="21"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="domain" description="Tad" evidence="2">
        <location>
            <begin position="21"/>
            <end position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13400"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ76099.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="469" mass="50295" checksum="A05CCCBC353149B9" modified="2015-12-09" version="1">MRSLLPKLASRFSSLGADQSGNVAILTALAFVPLMLITIGSLDVVRMTTAQAKLQSTLDSATLAAASLSNTASIEDTVDEYVRANLPDTAPWTTLNLTMGNVTDSLNAKSVEITATVDIEMTILKLAGIDSTSVLASSVAQQAARNIEVSVVLDISSSMGGSKITSLREAAKDFIETMLKEDEDKEYTSLSIIPFGGTVNIGDFYDTYAVNSSTPGVIDSPSPADYYVNKNVPYGKFMFSTEREGCIEYTDDDFDMNAIPANSRPQIPDFTKWVATNPWCPSDDTAMLLNSNNETALKALITDMDLSDGTGMDIGALWGAKVLSGSMRGQLGGDFADRPADFNDEDTLKVAVIMTDGAITAQFRPRDYTTTGKIQNSTQQTIVSKGGKNTSSSTADNAVAYFKRVCEYLNDNNVQVYTIGFQISSGSLPDELLQYCASSLSNYYFVEGLNIDDAFNAIAASVNSLRISG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMJ7</accession>
    <name>A0A0M7AMJ7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Flagellar hook-length control protein FliK</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_04086</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ75013.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04086"/>
    <dbReference type="EnsemblBacteria" id="CTQ75013">
        <property type="protein sequence ID" value="CTQ75013"/>
        <property type="gene ID" value="LAX5112_04086"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.750.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021136">
        <property type="entry name" value="Flagellar_hook_control-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038610">
        <property type="entry name" value="FliK-like_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02120">
        <property type="entry name" value="Flg_hook"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0966">Cell projection</keyword>
    <keyword evidence="3" id="KW-0969">Cilium</keyword>
    <keyword evidence="3" id="KW-0282">Flagellum</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Flg_hook" evidence="2">
        <location>
            <begin position="278"/>
            <end position="353"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="110"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="347"/>
            <end position="432"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="55"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="110"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="353"/>
            <end position="391"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02120"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ75013.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="432" mass="44187" checksum="1B4D4394C48FE489" modified="2015-12-09" version="1">MTVTTHAMIRTPSKAPVGGDGNQGEGSKNTGKDVADQFRAMMSDLTAVDGNAKDGDRQSATTQGAEQAATGEETAIAVKSEAAGKLETSSFSVTNLTDAIRKASQTVLGTQASGKDGVQGQDDAATKSAQHSMPVAAALPLGTVLAAHTGQGVPQAAQGNSLGTASQNTAGQQTLLAQNAANSAQIAAGEAAKTGTSSLFAQFGIEPERVGEKATGSAAARNALPEEAAGTVKVLRQETHFAPNMRLSPAQQVGEQIATALKDMPVDTGRTQGGLTHKAEGPVLKTLEIQLTPHELGTVKVSLRMVGENVEVTLATSKAQTAELLKQDRQLLDQMLRTTGFKADAITIQAADDRPTAPTNISNSSSTQGQQGTNGGAFGDQQNQNAPGNGTGGRGEQAGGNDENGAFPGFEPAREQSDEDGPGNRLSDGIYM</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMX6</accession>
    <name>A0A0M7AMX6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">High-affinity zinc uptake system protein ZnuA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">znuA</name>
        <name evidence="3" type="ORF">LAX5112_04055</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ74954.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04055"/>
    <dbReference type="EnsemblBacteria" id="CTQ74954">
        <property type="protein sequence ID" value="CTQ74954"/>
        <property type="gene ID" value="LAX5112_04055"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030001">
        <property type="term" value="P:metal ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006127">
        <property type="entry name" value="ZnuA-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01297">
        <property type="entry name" value="ZnuA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809602" evidence="2">
        <location>
            <begin position="35"/>
            <end position="396"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="132"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="132"/>
            <end position="226"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ74954.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="396" mass="42915" checksum="C2383DA00F35452D" modified="2015-12-09" version="1">MTELTAMQNARKLRLALAASTLLAGSALTAPAFADGPNVVTTIKPVHSIAAAVMAGVGTPHILIDGATSPHGFALKPSQAFLLQGADVVFWVGPELSSSLEKPISSMADKAARVELLDVEGIEQLKWREGDQFDSHDHGEQDDHGHDDHADHGHDDHAHDHEKTAEEHEHGHDDHDHDKDHAHDDDAHEHEEEHAAHDDHDEHAHEEEHAEHDDHGHDHGHDHAGSNDPHIWLNPENGIAIANAMATTLSEVDPTHADTYQANAKAFAEKVSGLEAEISAKLEPVKGQKFIVFHDAYHHFEHHYDIEASGAITVTPEALASAEQVAEIQSRVRDQNIVCVFQEPQFDSKLVNIVIEGSDAKVGVLDPLGTELANGPDLYPALLTGLADSLADCLKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMY0</accession>
    <name>A0A0M7AMY0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">sn-glycerol-3-phosphate transport system permease protein UgpA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ugpA_2</name>
        <name evidence="7" type="ORF">LAX5112_04612</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000027">
        <property type="protein sequence ID" value="CTQ76498.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04612"/>
    <dbReference type="EnsemblBacteria" id="CTQ76498">
        <property type="protein sequence ID" value="CTQ76498"/>
        <property type="gene ID" value="LAX5112_04612"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="71"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="108"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="164"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="202"/>
            <end position="222"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="269"/>
            <end position="287"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="71"/>
            <end position="281"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ76498.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="302" mass="33574" checksum="A8DA74F02E6562DF" modified="2015-12-09" version="1">MRAQTLNRATPYMFMAPAAVIMAIALLYPLGYMIYGSFRDWNPSQSIGESEFVGLKNYITLFFDPAFRESLSVTLTFAFAVVVAEMVIGVGLALLLDRNIRGMSVLRTLFILPMMIAPVVVGLMWRYMYHPTVGTFNTTLKSWGLNGIDWLGQNALLSVIIADVWQWTPFIFILALAALQSLPRSALEAARIDGATAWQQIIHIKLPLMMPVLIVTGLLRLIDAFKVLEVILVMTEGGPGLSTEIVALRISRTATEFRELGVAAAMSNYLLMLLLLLTVAMFAITRLQEARAQRAARQIQED</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AN50</accession>
    <name>A0A0M7AN50_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Ubiquinol oxidase subunit 1</fullName>
            <ecNumber evidence="9">1.10.3.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">cyoB</name>
        <name evidence="9" type="ORF">LAX5112_04378</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the heme-copper respiratory oxidase family.</text>
    </comment>
    <dbReference type="EC" id="1.10.3.-" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75836.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673596.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000023.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04378"/>
    <dbReference type="EnsemblBacteria" id="CTQ75836">
        <property type="protein sequence ID" value="CTQ75836"/>
        <property type="gene ID" value="LAX5112_04378"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070469">
        <property type="term" value="C:respirasome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004129">
        <property type="term" value="F:cytochrome-c oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016682">
        <property type="term" value="F:oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009060">
        <property type="term" value="P:aerobic respiration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.210.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023616">
        <property type="entry name" value="Cyt_c_oxase-like_su1_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036927">
        <property type="entry name" value="Cyt_c_oxase-like_su1_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000883">
        <property type="entry name" value="Cyt_C_Oxase_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023615">
        <property type="entry name" value="Cyt_c_Oxase_su1_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014207">
        <property type="entry name" value="Cyt_c_ubiqinol_oxidase_su1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10422">
        <property type="entry name" value="PTHR10422"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00115">
        <property type="entry name" value="COX1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01165">
        <property type="entry name" value="CYCOXIDASEI"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81442">
        <property type="entry name" value="SSF81442"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02843">
        <property type="entry name" value="CyoB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50855">
        <property type="entry name" value="COX1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00077">
        <property type="entry name" value="COX1_CUB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0249">Electron transport</keyword>
    <keyword evidence="6" id="KW-0349">Heme</keyword>
    <keyword evidence="6" id="KW-0408">Iron</keyword>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0679">Respiratory chain</keyword>
    <keyword evidence="3 6 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="12"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="59"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="101"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="138"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="188"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="229"/>
            <end position="254"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="274"/>
            <end position="297"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="309"/>
            <end position="333"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="345"/>
            <end position="367"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="379"/>
            <end position="402"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="422"/>
            <end position="439"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="451"/>
            <end position="473"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="493"/>
            <end position="517"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="583"/>
            <end position="603"/>
        </location>
    </feature>
    <feature type="domain" description="COX1" evidence="8">
        <location>
            <begin position="39"/>
            <end position="558"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU000370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50855"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ75836.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="680" mass="75458" checksum="36D56C5BDE6B6EC2" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANL3</accession>
    <name>A0A0M7ANL3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Bifunctional protein PaaZ</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">paaZ_3</name>
        <name evidence="2" type="ORF">LAX5112_04433</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ76006.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04433"/>
    <dbReference type="EnsemblBacteria" id="CTQ76006">
        <property type="protein sequence ID" value="CTQ76006"/>
        <property type="gene ID" value="LAX5112_04433"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029069">
        <property type="entry name" value="HotDog_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002539">
        <property type="entry name" value="MaoC-like_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01575">
        <property type="entry name" value="MaoC_dehydratas"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54637">
        <property type="entry name" value="SSF54637"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MaoC-like" evidence="1">
        <location>
            <begin position="29"/>
            <end position="139"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01575"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76006.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="167" mass="18269" checksum="605AC4461FE72CAE" modified="2015-12-09" version="1">MADQVTGPDWTPADHRPGPSLFFEDLEVGRRYGLPSRTQTDALFAAFQLASGDNDPIHYDRVYCQSIGHKDMLAHGMHVLIQSAAGAGTFPEEVADALIGFIGLECKFMKPVYVGDTLYSELVISELIEQNTTGVVVITATIRNQDGVTVLTGKHRYLLRKRSSVSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANX3</accession>
    <name>A0A0M7ANX3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Septum formation inhibitor-activating ATPase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04254</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75483.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75483">
        <property type="protein sequence ID" value="CTQ75483"/>
        <property type="gene ID" value="LAX5112_04254"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002586">
        <property type="entry name" value="CobQ/CobB/MinD/ParA_Nub-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01656">
        <property type="entry name" value="CbiA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CbiA" evidence="1">
        <location>
            <begin position="6"/>
            <end position="42"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01656"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75483.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="65" mass="7150" checksum="9670E1A144776B60" modified="2015-12-09" version="1">MQKLIICLLGLKGGSGKSTTARMLATAYAEAGLSVKIADFDVWQQTACERRYRSLRDNDGCEQPL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APG9</accession>
    <name>A0A0M7APG9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04633</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000027">
        <property type="protein sequence ID" value="CTQ76557.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76557">
        <property type="protein sequence ID" value="CTQ76557"/>
        <property type="gene ID" value="LAX5112_04633"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002514">
        <property type="entry name" value="Transposase_8"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01527">
        <property type="entry name" value="HTH_Tnp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="55"/>
            <end position="82"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76557.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="91" mass="10581" checksum="598234DFF6F7B68C" modified="2015-12-09" version="1">MASRHGAEFRAEAVRIALTSGLSRKQVARDLGVGFSTLNRWIQQDRRDPEKPATQSDLEKEIAELRRENRLLREEREVLKKATQFFAERSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQ15</accession>
    <name>A0A0M7AQ15_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Glycine betaine/carnitine transport ATP-binding protein GbuA</fullName>
            <ecNumber evidence="6">3.6.3.32</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">gbuA</name>
        <name evidence="6" type="ORF">LAX5112_04652</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.32" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000027">
        <property type="protein sequence ID" value="CTQ76611.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673833.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000027.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04652"/>
    <dbReference type="EnsemblBacteria" id="CTQ76611">
        <property type="protein sequence ID" value="CTQ76611"/>
        <property type="gene ID" value="LAX5112_04652"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031460">
        <property type="term" value="P:glycine betaine transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000644">
        <property type="entry name" value="CBS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046342">
        <property type="entry name" value="CBS_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005892">
        <property type="entry name" value="Gly-betaine_transp_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00571">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54631">
        <property type="entry name" value="SSF54631"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01186">
        <property type="entry name" value="proV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="27"/>
            <end position="268"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="64"/>
            <end position="71"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ76611.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="351" mass="38276" checksum="E5188D68E90A7B01" modified="2015-12-09" version="1">MNGDTVIEISNVWKIFGANSDAALSAVRDEGLSKAEVLDRWNAVVGVADVSLSVNRGEIFCIMGLSGSGKSTLVRHFNRLLEPTDGKILIEGTDVVGLGPADLQSFRNRKIGMVFQNFALMPHRSVLDNVAMPLEIRGVPKNERMRQAASFLDIVELGAWGAKYAHELSGGMQQRVGLARALAANPDVLLMDEPFSALDPLIRRQLQDEFIRLSKILKKTTVFITHDLDEAVRIGDRIAIMRDGRVVQMGTAEDIVMHPADDYVADFVAGISRLKVVRAHAVMRPISEYETDHGPVPEGAPRVDEGETLSTLINMAIDTGDAILVEDQGTLVGVITRADILRTVIEGTEVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQ33</accession>
    <name>A0A0M7AQ33_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Methyl-accepting chemotaxis protein 4</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">mcp4_19</name>
        <name evidence="9" type="ORF">LAX5112_04847</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the methyl-accepting chemotaxis (MCP) protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000032">
        <property type="protein sequence ID" value="CTQ77238.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673994.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000032.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77238">
        <property type="protein sequence ID" value="CTQ77238"/>
        <property type="gene ID" value="LAX5112_04847"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032255">
        <property type="entry name" value="HBM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004089">
        <property type="entry name" value="MCPsignal_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000727">
        <property type="entry name" value="T_SNARE_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00015">
        <property type="entry name" value="MCPsignal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01358">
        <property type="entry name" value="HBM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00283">
        <property type="entry name" value="MA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50111">
        <property type="entry name" value="CHEMOTAXIS_TRANSDUC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50192">
        <property type="entry name" value="T_SNARE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 3" id="KW-0807">Transducer</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="21"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="294"/>
            <end position="317"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="8">
        <location>
            <begin position="319"/>
            <end position="372"/>
        </location>
    </feature>
    <feature type="domain" description="Methyl-accepting transducer" evidence="6">
        <location>
            <begin position="412"/>
            <end position="634"/>
        </location>
    </feature>
    <feature type="domain" description="T-SNARE coiled-coil homology" evidence="7">
        <location>
            <begin position="572"/>
            <end position="626"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="414"/>
            <end position="442"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="605"/>
            <end position="628"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="4">
        <location>
            <begin position="605"/>
            <end position="621"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023224"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00029447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ77238.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="668" mass="70685" checksum="99513D72668A49C0" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQF8</accession>
    <name>A0A0M7AQF8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04885</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000034">
        <property type="protein sequence ID" value="CTQ77368.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04885"/>
    <dbReference type="EnsemblBacteria" id="CTQ77368">
        <property type="protein sequence ID" value="CTQ77368"/>
        <property type="gene ID" value="LAX5112_04885"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ77368.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="162" mass="17546" checksum="3A89621EEC5C137B" modified="2015-12-09" version="1">MELDKGIGRGKGSESAACSEGCHDLTELTNQLPGLPDEIADITDIWVAMAIVELVGGTRVSIPARVPDGHWLVALVGRTAADKICEHFRILSPDGREASVRQVVIPKGPAACLAKDRTRLVMELEAGISSREAASRARLSERAAFRMRARLRNEDDSQGKLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARC2</accession>
    <name>A0A0M7ARC2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Acetyltransferase (GNAT) family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04479</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ76134.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04479"/>
    <dbReference type="EnsemblBacteria" id="CTQ76134">
        <property type="protein sequence ID" value="CTQ76134"/>
        <property type="gene ID" value="LAX5112_04479"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13302">
        <property type="entry name" value="Acetyltransf_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="15"/>
            <end position="166"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76134.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="172" mass="19696" checksum="4F8467A3A5B70969" modified="2015-12-09" version="1">MSGNVETDRLLLTRPKISEVPELYGFLGDPRAMQFTQINKDLASCRRRIAVHEWRRRRDGFAPWTVRAKRQPEIIGWGGLYDDPFDPGWGPELAFFFHPRAWGQGYGAELSLAALDVADTKVGLPLVSAFAHPNNEASQKLLQKVGFQPERHVESMNRILYRRQRRHQSEAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AS44</accession>
    <name>A0A0M7AS44_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_05028</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000043">
        <property type="protein sequence ID" value="CTQ77719.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77719">
        <property type="protein sequence ID" value="CTQ77719"/>
        <property type="gene ID" value="LAX5112_05028"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ77719.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="193" mass="21019" checksum="C00B43A1894DE477" modified="2015-12-09" version="1">MTVVIYLTARDEGLQIGGKALGAQAGHKASQIVGVGTNVSSRTPQSGPGRVRAPVGLLVVLFDRQPILRVFDLNDPDCSKIAVLDHLPRLTDHRIAGVIVRENKQGRRGLGRFGQLFGVCQRGGHRLVADHVNAAFQKRLGSRIVNMVRRHDGNRFDPVLQPCLPFGHVFKGAIDPIRLEAESLSGRDGLIRC</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AS85</accession>
    <name>A0A0M7AS85_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">ParB/RepB/Spo0J family partition protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_04886</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000034">
        <property type="protein sequence ID" value="CTQ77371.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674031.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000034.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04886"/>
    <dbReference type="EnsemblBacteria" id="CTQ77371">
        <property type="protein sequence ID" value="CTQ77371"/>
        <property type="gene ID" value="LAX5112_04886"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003115">
        <property type="entry name" value="ParB/Sulfiredoxin_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036086">
        <property type="entry name" value="ParB/Sulfiredoxin_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011111">
        <property type="entry name" value="Plasmid_RepB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02195">
        <property type="entry name" value="ParBc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07506">
        <property type="entry name" value="RepB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00470">
        <property type="entry name" value="ParB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF110849">
        <property type="entry name" value="SSF110849"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ParB" evidence="2">
        <location>
            <begin position="14"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="210"/>
            <end position="236"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00470"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ77371.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="301" mass="34137" checksum="BE58DCFF5C568042" modified="2015-12-09" version="1">MTKSIEIGFDQKTRVIALDQIAPTKLVSNEIKKTKKYRQIISSIEEIGLVEPLVVHRLTSSQQQRYTLLDGHLRLEALKHLKIGEAQCLLSKDDEMFTYNKRINRLASVQEHYMILRALDYGVPEERIARALGVNISRIRAKKKLLDGICPEVVEILKDRQFSTHTANLLKKMKPVRQIEVAELMVATNNYAAPYVRALVVATPASQLKEPEKRKPYGGLSSDEQTSMEQEMSKLQRDIKAVEESYGTNMLTLVVANGYLSRLLDNEQVSGYLRRHHGELHRQLETLHDGIEADIGLGGPK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AT02</accession>
    <name>A0A0M7AT02_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">HupE / UreJ protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_04676</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000028">
        <property type="protein sequence ID" value="CTQ76694.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04676"/>
    <dbReference type="EnsemblBacteria" id="CTQ76694">
        <property type="protein sequence ID" value="CTQ76694"/>
        <property type="gene ID" value="LAX5112_04676"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032809">
        <property type="entry name" value="Put_HupE_UreJ"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13795">
        <property type="entry name" value="HupE_UreJ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809643" evidence="2">
        <location>
            <begin position="21"/>
            <end position="336"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="146"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="177"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="206"/>
            <end position="224"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="236"/>
            <end position="259"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="279"/>
            <end position="300"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="312"/>
            <end position="330"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ76694.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="336" mass="36416" checksum="49DCD4E87F54F0D8" modified="2015-12-09" version="1">MMIVRLVFILLLMLGGSKTAMPHALDPGYLSISQINDETWEVFWRKPDVQGAPMSIDAQLPETCTPRFGPAPSSDGSAWIASWVAICSRGLEGQTLQIKGLEQQNTDVLIRYQPKDTAASTKRLSSSSTQLVLPTAPSAMSVFRTYGLLGFDHILEGLDHLLFVMALVLLIPDKWRLVGTITAFTIAHSITLALASLGHISIPGPPVEAIIALSVVFLAVELLKRKDDQSRLSERAPWVIAFAFGLLHGLGFAGALQEIGLPDTDVVLALLAFNLGVEAGQLMFVAVILVTGFFFQNIIVESVPKQLAFQQRLTTLSAYAIGGVATYWLAERLAGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AT87</accession>
    <name>A0A0M7AT87_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Cold shock protein CspA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">cspA_4</name>
        <name evidence="4" type="ORF">LAX5112_04987</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000038">
        <property type="protein sequence ID" value="CTQ77636.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008192268.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000038.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04987"/>
    <dbReference type="EnsemblBacteria" id="CTQ77636">
        <property type="protein sequence ID" value="CTQ77636"/>
        <property type="gene ID" value="LAX5112_04987"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd04458">
        <property type="entry name" value="CSP_CDS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012156">
        <property type="entry name" value="Cold_shock_CspA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011129">
        <property type="entry name" value="CSD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019844">
        <property type="entry name" value="CSD_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002059">
        <property type="entry name" value="CSP_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00313">
        <property type="entry name" value="CSD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002599">
        <property type="entry name" value="Cold_shock_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00050">
        <property type="entry name" value="COLDSHOCK"/>
    </dbReference>
    <dbReference type="SMART" id="SM00357">
        <property type="entry name" value="CSP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00352">
        <property type="entry name" value="CSD_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51857">
        <property type="entry name" value="CSD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CSD" evidence="3">
        <location>
            <begin position="1"/>
            <end position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU000408"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ77636.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="69" mass="7352" checksum="BA6083479D95BEE2" modified="2015-12-09" version="1">MTIGTVKFFNSTKGYGFIQPEDGSNDVFVHISAVERAGLATLNEGDKVSFEVVQDRRSGKSAADNLSAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ATP1</accession>
    <name>A0A0M7ATP1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative transporter component</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04756</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000030">
        <property type="protein sequence ID" value="CTQ76954.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04756"/>
    <dbReference type="EnsemblBacteria" id="CTQ76954">
        <property type="protein sequence ID" value="CTQ76954"/>
        <property type="gene ID" value="LAX5112_04756"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="49"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="83"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="114"/>
            <end position="136"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76954.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="142" mass="14171" checksum="3E0282234E1BA285" modified="2015-12-09" version="1">MTEFTPILSFSGGLLIGLAAVALMAVHGRIAGINGIVGGLLSLNINSDWAWRAAFIAGMVASPLVLLGATGQLPQISIPSSPALLLAGGFLTGVGTTLGSGCTSGHGVCGMSRLSARSIVATMTFMATGGVTVFLIRHVFGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AUF6</accession>
    <name>A0A0M7AUF6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">GtrA-like protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">LAX5112_04842</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the GtrA family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000032">
        <property type="protein sequence ID" value="CTQ77224.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673990.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000032.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04842"/>
    <dbReference type="EnsemblBacteria" id="CTQ77224">
        <property type="protein sequence ID" value="CTQ77224"/>
        <property type="gene ID" value="LAX5112_04842"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000271">
        <property type="term" value="P:polysaccharide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007267">
        <property type="entry name" value="GtrA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04138">
        <property type="entry name" value="GtrA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="21"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="53"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="84"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="115"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="domain" description="GtrA" evidence="7">
        <location>
            <begin position="21"/>
            <end position="138"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009399"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF04138"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ77224.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="145" mass="15741" checksum="EC4EE1B698B0C13F" modified="2015-12-09" version="1">MIMITDRKRQTLKTEANAAGKFAVVGVVATLTHAAVAGFLLESGLLPPMLANFAGFLVAFGVSFSGHFYWSFSHLRQEKTALKAMLRFLLIAASGFALNSSVLALWLSLTPWPDLLGLMVSIAIVPSLTFIGTRFWAFSHPEVDP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZM64</accession>
    <name>A0A0M6ZM64_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00089</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63849.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ63849">
        <property type="protein sequence ID" value="CTQ63849"/>
        <property type="gene ID" value="LAX5112_00089"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ63849.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="146" mass="16450" checksum="17B95ECE692CF42C" modified="2015-12-09" version="1">MWNWDCHLTISFTHVIFDSGHTTQNATLREIHEDFITLVSRFNNNMAILKGFQSAGILQKTATLVGGIMSQSNVKTDPKLDQEPPVEAIKRMIRYTQKEADKDGRTFCSYFLDMALQSLEDGSEDLDTMLKSKVTPLMVNQTSTGT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZN41</accession>
    <name>A0A0M6ZN41_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Efflux pump periplasmic linker BepF</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">bepF_1</name>
        <name evidence="5" type="ORF">LAX5112_00206</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64178.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670206.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00206"/>
    <dbReference type="EnsemblBacteria" id="CTQ64178">
        <property type="protein sequence ID" value="CTQ64178"/>
        <property type="gene ID" value="LAX5112_00206"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032317">
        <property type="entry name" value="HlyD_D23"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006143">
        <property type="entry name" value="RND_pump_MFP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16576">
        <property type="entry name" value="HlyD_D23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01730">
        <property type="entry name" value="RND_mfp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809149" evidence="3">
        <location>
            <begin position="25"/>
            <end position="387"/>
        </location>
    </feature>
    <feature type="domain" description="HlyD_D23" evidence="4">
        <location>
            <begin position="54"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="2">
        <location>
            <begin position="146"/>
            <end position="173"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF16576"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ64178.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="387" mass="41425" checksum="8251AE18A9A8FF91" modified="2015-12-09" version="1">MFFERFSLKTRFAAAPLLAAAVLAGCSDDSANQQSEAPPPPAVTVAKIEKTDIRQSARFVGQVAAVDQVDLVARVSGFLENKAVPDGSVVKKGDQLFTIEKAQYEASLLKAKADVASAKADAALKAADEKRDKDLFEKGHVSEAAYEATLAQKEQAEALVEAAESAQKQAELNLSYTDVSAPFPGQMGKTTYSVGEVVGPNTQPLAKLIRLAPVYVNFSVSESEYLNAVQNHGINPSDIDASKSPDIKLILPNGQQYEEVGKIVYIDNAVDPTTGTIAFRGQFTNKDIRLLAGTYVTVILEAPETETALVVPQSAIQRDQQGDFALQVADDKTVKQVYLDLGQQVDTNFVVKKGLDEGAEVIVEGLQKVRPGVEVDPVLASQPAESS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZNC7</accession>
    <name>A0A0M6ZNC7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">tRNA-dihydrouridine synthase</fullName>
            <ecNumber evidence="10">1.3.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">dus_1</name>
        <name evidence="13" type="ORF">LAX5112_00240</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4 10">Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>a 5,6-dihydrouridine in tRNA + NAD(+) = a uridine in tRNA + H(+) + NADH</text>
            <dbReference type="Rhea" id="RHEA:54452"/>
            <dbReference type="Rhea" id="RHEA-COMP:13339"/>
            <dbReference type="Rhea" id="RHEA-COMP:13887"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:65315"/>
            <dbReference type="ChEBI" id="CHEBI:74443"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>a 5,6-dihydrouridine in tRNA + NADP(+) = a uridine in tRNA + H(+) + NADPH</text>
            <dbReference type="Rhea" id="RHEA:23624"/>
            <dbReference type="Rhea" id="RHEA-COMP:13339"/>
            <dbReference type="Rhea" id="RHEA-COMP:13887"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="ChEBI" id="CHEBI:65315"/>
            <dbReference type="ChEBI" id="CHEBI:74443"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="3 10">
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="10">Belongs to the dus family.</text>
    </comment>
    <dbReference type="EC" id="1.3.1.-" evidence="10"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64275.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00240"/>
    <dbReference type="EnsemblBacteria" id="CTQ64275">
        <property type="protein sequence ID" value="CTQ64275"/>
        <property type="gene ID" value="LAX5112_00240"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017150">
        <property type="term" value="F:tRNA dihydrouridine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd02801">
        <property type="entry name" value="DUS_like_FMN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1200.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035587">
        <property type="entry name" value="DUS-like_FMN-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001269">
        <property type="entry name" value="DUS_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024036">
        <property type="entry name" value="tRNA-dHydroUridine_Synthase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004652">
        <property type="entry name" value="tRNA_dU_NifR3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018517">
        <property type="entry name" value="tRNA_hU_synthase_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01207">
        <property type="entry name" value="Dus"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006621">
        <property type="entry name" value="Dus"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00737">
        <property type="entry name" value="nifR3_yhdG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01136">
        <property type="entry name" value="UPF0034"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 10" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="6 10" id="KW-0288">FMN</keyword>
    <keyword evidence="9 10 13" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="7 10" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="Dus" evidence="12">
        <location>
            <begin position="27"/>
            <end position="327"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="11">
        <location>
            <position position="113"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001183"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001387"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00001917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00002790"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRNR" id="PIRNR006621"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRSR" id="PIRSR006621-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF01207"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="CTQ64275.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="345" mass="36680" checksum="77D212FEDA114FFD" modified="2015-12-09" version="1">MSICESASRPGMKSIKIGPHSLKNRAILAPMSGVSDLPFRRLAARFGAGMVVSEMVASESFVKGDAETQMRAEAQDGGLHVVQLAGREARWMGEAAKVIAGLGADIIDINMGCPAKKVTSGYSGSALMRDLDHALTLIEATVEAVDVPVTLKMRLGWDETTINAPELARRAEAAGVQLITVHGRTRCQFYKGTADWNAISAVKSEISVPLIANGDCTGIESADAMLVASGADAVMIGRGAYGRPWLPGLVGHYLETGEILSAPQGNALGDLVIEHYEAILDLYGVLPGVRIARKHLGWYLDTSIEQGGLDMPGALKKTMMTSNQPDEVVRIASDWFSSCKTRTAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZP10</accession>
    <name>A0A0M6ZP10_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">HD domain protein, cyanamide hydratase family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00110</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63906.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ63906">
        <property type="protein sequence ID" value="CTQ63906"/>
        <property type="gene ID" value="LAX5112_00110"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00077">
        <property type="entry name" value="HDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003607">
        <property type="entry name" value="HD/PDEase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006674">
        <property type="entry name" value="HD_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01966">
        <property type="entry name" value="HD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HD" evidence="1">
        <location>
            <begin position="95"/>
            <end position="183"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ63906.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="271" mass="29806" checksum="11CF20D33C098C3F" modified="2015-12-09" version="1">MTTICRTKHKAPIMGSLAWGERKGAFSEGRLTRAEKFTVIGNMVRMSLLQALDLASDRLGLMNAFGADLDGLLPMQTRLVSDSQALASEKLGTDVLEHSWRTYYWAMCLAGYKKLDVDREILFSAAMLHDLGLAKDRPVHPGACCFTVHGAKRSKDLLVSQGHDPAKARKIGEAIGLHLNGYVSRRLHGAEAHLLSRGAMCDVFGMGRARIAGSTRREVQNRHLKGDLMNGLEIWPGHHLQGTRGDFLIRVGGKHHTATIPKDKLLVAPRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPE2</accession>
    <name>A0A0M6ZPE2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00342</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64625.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670333.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00342"/>
    <dbReference type="EnsemblBacteria" id="CTQ64625">
        <property type="protein sequence ID" value="CTQ64625"/>
        <property type="gene ID" value="LAX5112_00342"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009282">
        <property type="entry name" value="DUF937"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06078">
        <property type="entry name" value="DUF937"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ64625.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="252" mass="27671" checksum="EBCC2FC5E319090E" modified="2015-12-09" version="1">MTTHDKAAPPFDIFSLSKDMQERYGWSNDDLNRVMEHLMPAALSGFQHFGTPSKGMPDWFSQAAQLSAGSGNPFADYAKFFQAPTQQTLTPFFGPEAVQQAVAAQISTMTGVQRDAVQELMPVAATLAFGQVARPFLQGEAQVLLDAYLRGFARGRPKRAPAPIDYLQGYTEAMNAFWGPFLQPAAARDAEEEAELEPELEDDLADEEAEADDASEFDEMVSGWMSAGRDLQSSQFKAFDDFFATATKNLGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPH3</accession>
    <name>A0A0M6ZPH3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Putative hydrolase of the alpha/beta superfamily protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00169</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64076.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670184.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00169"/>
    <dbReference type="EnsemblBacteria" id="CTQ64076">
        <property type="protein sequence ID" value="CTQ64076"/>
        <property type="gene ID" value="LAX5112_00169"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000801">
        <property type="entry name" value="Esterase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00756">
        <property type="entry name" value="Esterase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ64076.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="337" mass="37207" checksum="BA00BA712C2279A8" modified="2015-12-09" version="1">MRARHDIPAGTLHRISVTTEILTQNRLGDPATRAVVVYVPHGHDGGGLPLLVDIVGYTSGGPAHVNWKNFGENVPERLDRLIQDGALPPVVVAFPDCFTRLGGNQYIDSTAMGPWATWLTTDMLQTVEGQFGCGGHGKRGLFGKSSGGYGAIFHAMKYADVWSAAACHSGDMAFELCYLPEMPSALRAIQKHGSIEAFVRWFEAGPKYPGGALHDLMTFAMAATYDPDPSPDTFCGIRLPVDLETCEIIEDRWNAWLSWDPVQMVEAHTDALKSMKGLWIDCGYIDQYNLVYGARRLKRKLEAAGVDHIYEEFNDTHSSIDYRMDESLPFLANALLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPL1</accession>
    <name>A0A0M6ZPL1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">CTP synthase</fullName>
            <ecNumber evidence="9">6.3.4.2</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">Cytidine 5'-triphosphate synthase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="9">Cytidine triphosphate synthetase</fullName>
            <shortName evidence="9">CTP synthetase</shortName>
            <shortName evidence="9">CTPS</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="9">UTP--ammonia ligase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9 12" type="primary">pyrG</name>
        <name evidence="12" type="ORF">LAX5112_00203</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 9">
            <text>ATP + H2O + L-glutamine + UTP = ADP + CTP + 2 H(+) + L-glutamate + phosphate</text>
            <dbReference type="Rhea" id="RHEA:26426"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:37563"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:46398"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.4.2"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>ATP + NH4(+) + UTP = ADP + CTP + 2 H(+) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:16597"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:37563"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:46398"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>H2O + L-glutamine = L-glutamate + NH4(+)</text>
            <dbReference type="Rhea" id="RHEA:15889"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
        </reaction>
    </comment>
    <comment type="activity regulation">
        <text evidence="9">Allosterically activated by GTP, when glutamine is the substrate; GTP has no effect on the reaction when ammonia is the substrate. The allosteric effector GTP functions by stabilizing the protein conformation that binds the tetrahedral intermediate(s) formed during glutamine hydrolysis. Inhibited by the product CTP, via allosteric rather than competitive inhibition.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2 9">Pyrimidine metabolism; CTP biosynthesis via de novo pathway; CTP from UDP: step 2/2.</text>
    </comment>
    <comment type="subunit">
        <text evidence="9">Homotetramer.</text>
    </comment>
    <comment type="miscellaneous">
        <text evidence="9">CTPSs have evolved a hybrid strategy for distinguishing between UTP and CTP. The overlapping regions of the product feedback inhibitory and substrate sites recognize a common feature in both compounds, the triphosphate moiety. To differentiate isosteric substrate and product pyrimidine rings, an additional pocket far from the expected kinase/ligase catalytic site, specifically recognizes the cytosine and ribose portions of the product inhibitor.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 9">Belongs to the CTP synthase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="6.3.4.2" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64171.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670204.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00203"/>
    <dbReference type="EnsemblBacteria" id="CTQ64171">
        <property type="protein sequence ID" value="CTQ64171"/>
        <property type="gene ID" value="LAX5112_00203"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00159">
        <property type="reaction ID" value="UER00277"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003883">
        <property type="term" value="F:CTP synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044210">
        <property type="term" value="P:'de novo' CTP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006541">
        <property type="term" value="P:glutamine metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd03113">
        <property type="entry name" value="CTPS_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01746">
        <property type="entry name" value="GATase1_CTP_Synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01227">
        <property type="entry name" value="PyrG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004468">
        <property type="entry name" value="CTP_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017456">
        <property type="entry name" value="CTP_synthase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017926">
        <property type="entry name" value="GATASE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033828">
        <property type="entry name" value="GATase1_CTP_Synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11550">
        <property type="entry name" value="PTHR11550"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06418">
        <property type="entry name" value="CTP_synth_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00117">
        <property type="entry name" value="GATase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="SSF52317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00337">
        <property type="entry name" value="PyrG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7 9" id="KW-0315">Glutamine amidotransferase</keyword>
    <keyword evidence="4 9 12" id="KW-0436">Ligase</keyword>
    <keyword evidence="9" id="KW-0460">Magnesium</keyword>
    <keyword evidence="9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8 9" id="KW-0665">Pyrimidine biosynthesis</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CTP_synth_N" evidence="11">
        <location>
            <begin position="3"/>
            <end position="263"/>
        </location>
    </feature>
    <feature type="domain" description="GATase" evidence="10">
        <location>
            <begin position="300"/>
            <end position="532"/>
        </location>
    </feature>
    <feature type="region of interest" description="Amidoligase domain" evidence="9">
        <location>
            <begin position="1"/>
            <end position="265"/>
        </location>
    </feature>
    <feature type="region of interest" description="L-glutamine binding" evidence="9">
        <location>
            <begin position="381"/>
            <end position="384"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile; for glutamine hydrolysis" evidence="9">
        <location>
            <position position="380"/>
        </location>
    </feature>
    <feature type="active site" evidence="9">
        <location>
            <position position="514"/>
        </location>
    </feature>
    <feature type="active site" evidence="9">
        <location>
            <position position="516"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="13"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="14"/>
            <end position="19"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="54"/>
        </location>
        <ligand>
            <name>L-glutamine</name>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="71"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="139"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="146"/>
            <end position="148"/>
        </location>
        <ligand>
            <name>CTP</name>
            <dbReference type="ChEBI" id="CHEBI:37563"/>
            <note>allosteric inhibitor</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="186"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="222"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="240"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="353"/>
        </location>
        <ligand>
            <name>L-glutamine</name>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="404"/>
        </location>
        <ligand>
            <name>L-glutamine</name>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="469"/>
        </location>
        <ligand>
            <name>L-glutamine</name>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000314"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007533"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01227"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF00117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF06418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ64171.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="542" mass="59629" checksum="8128BB0B2290B740" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPU9</accession>
    <name>A0A0M6ZPU9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Phosphoribosyl 1,2-cyclic phosphodiesterase</fullName>
            <ecNumber evidence="2">3.1.4.55</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">phnP</name>
        <name evidence="2" type="ORF">LAX5112_00279</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.4.55" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64387.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670259.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00279"/>
    <dbReference type="EnsemblBacteria" id="CTQ64387">
        <property type="protein sequence ID" value="CTQ64387"/>
        <property type="gene ID" value="LAX5112_00279"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0103043">
        <property type="term" value="F:5-phospho-alpha-D-ribosyl 1,2-cyclic phosphate phosphodiesterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001279">
        <property type="entry name" value="Metallo-B-lactamas"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036866">
        <property type="entry name" value="RibonucZ/Hydroxyglut_hydro"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12706">
        <property type="entry name" value="Lactamase_B_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56281">
        <property type="entry name" value="SSF56281"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lactamase_B" evidence="1">
        <location>
            <begin position="51"/>
            <end position="234"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12706"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64387.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="280" mass="30711" checksum="982F1B2A8DBEC85D" modified="2015-12-09" version="1">MSVRLTILGCGSSGGVPRIGNDWGKCDPKEAKNRRRRCALLVEKFGDNNCTTVLIDTGPDLRDQLLGANVQRMDAVLYTHAHADHLHGIDDLRAFMVRDRRRIPVYMDIATFDKAMAAFGYCFETPKGSSYPPILDRHAMTAGTPVVIEGPGGAIEFLPIEVTHGEINALGFRIGNTAYVPDVSDISRENFDLLTGLDLLILDCLRRNPHPSHFNLDDALSWTKDLAPKKAIFTNLHNDLDYETLKGELPDGIEPAFDGLQVLIDGAMAETTPRIAADAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPV2</accession>
    <name>A0A0M6ZPV2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00217</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64206.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00217"/>
    <dbReference type="EnsemblBacteria" id="CTQ64206">
        <property type="protein sequence ID" value="CTQ64206"/>
        <property type="gene ID" value="LAX5112_00217"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007462">
        <property type="entry name" value="COV1-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31876">
        <property type="entry name" value="PTHR31876"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04367">
        <property type="entry name" value="DUF502"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="27"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="69"/>
            <end position="97"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64206.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="245" mass="27417" checksum="284A3FD5B1D91C73" modified="2015-12-09" version="1">MSKHKHNADDEHLVAHRPNAATRVRNYFLTGLVITGPIGITLWLTWTFIKWVDSWVKPFVPRVYNPETYLPFSIPGFGLIVAVVVLTIVGFLAANFLGRSLISFGERLVDRMPLVRNIYSGLKQIFQTVLDQRGTSFNKAALIEYPRKGLWAIVFISTDTKGEVSSQLKNLADTVSVFLPTTPNPTSGFLLFVPKEDVIELNMSVEDAAKLVISAGLVSPDYPEYVEDLVVDPKQAERLKKVEKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRE6</accession>
    <name>A0A0M6ZRE6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Adenosine 5'-phosphosulfate reductase</fullName>
            <shortName evidence="3">APS reductase</shortName>
            <ecNumber evidence="3">1.8.4.10</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">5'-adenylylsulfate reductase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="3">Thioredoxin-dependent 5'-adenylylsulfate reductase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3 5" type="primary">cysH</name>
        <name evidence="5" type="ORF">LAX5112_00391</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Catalyzes the formation of sulfite from adenosine 5'-phosphosulfate (APS) using thioredoxin as an electron donor.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>[thioredoxin]-disulfide + AMP + 2 H(+) + sulfite = [thioredoxin]-dithiol + adenosine 5'-phosphosulfate</text>
            <dbReference type="Rhea" id="RHEA:21976"/>
            <dbReference type="Rhea" id="RHEA-COMP:10698"/>
            <dbReference type="Rhea" id="RHEA-COMP:10700"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17359"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:50058"/>
            <dbReference type="ChEBI" id="CHEBI:58243"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="1.8.4.10"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="3">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
        <text evidence="3">Binds 1 [4Fe-4S] cluster per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="3">Sulfur metabolism; hydrogen sulfide biosynthesis; sulfite from sulfate.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the PAPS reductase family. CysH subfamily.</text>
    </comment>
    <dbReference type="EC" id="1.8.4.10" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64756.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670368.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00391"/>
    <dbReference type="EnsemblBacteria" id="CTQ64756">
        <property type="protein sequence ID" value="CTQ64756"/>
        <property type="gene ID" value="LAX5112_00391"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00056">
        <property type="reaction ID" value="UER00095"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043866">
        <property type="term" value="F:adenylyl-sulfate reductase (thioredoxin) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004604">
        <property type="term" value="F:phosphoadenylyl-sulfate reductase (thioredoxin) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019379">
        <property type="term" value="P:sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01713">
        <property type="entry name" value="PAPS_reductase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00063">
        <property type="entry name" value="CysH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004511">
        <property type="entry name" value="PAPS/APS_Rdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002500">
        <property type="entry name" value="PAPS_reduct"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01507">
        <property type="entry name" value="PAPS_reduct"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000857">
        <property type="entry name" value="PAPS_reductase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00434">
        <property type="entry name" value="cysH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3" id="KW-0408">Iron</keyword>
    <keyword evidence="3" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2 3 5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PAPS_reduct" evidence="4">
        <location>
            <begin position="49"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile; cysteine thiosulfonate intermediate" evidence="3">
        <location>
            <position position="237"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="130"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="131"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="211"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="214"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009732"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00063"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF01507"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ64756.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="253" mass="27611" checksum="DED7F15E0FE17DF8" modified="2015-12-09" version="1">MALHETFSLGVDPELGLQAEIAALNAQFEDAVAQDILQASIRHQFAGEIAMVSSFGADSAVLLHMVSQVDPSTPVLFVDTVKLFPATILYRDELVARLGLTDVRTFKPSEDDLAEKDPAGMLWMSDTDACCHIRKVVPLERALNGFEAWISGRKRHQSSTRSELDVFEIDAGRVKINPLADWSAADILDYAKSHDLPPHPLVAEGYPSIGCLPCTSKVAPGEDPRAGRWRGQDKTECGIHWPTHGKEIDGSGI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRH5</accession>
    <name>A0A0M6ZRH5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">LIV-I protein H</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">livH_3</name>
        <name evidence="7" type="ORF">LAX5112_00453</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64937.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00453"/>
    <dbReference type="EnsemblBacteria" id="CTQ64937">
        <property type="protein sequence ID" value="CTQ64937"/>
        <property type="gene ID" value="LAX5112_00453"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
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        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
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        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001851">
        <property type="entry name" value="ABC_transp_permease"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02653">
        <property type="entry name" value="BPD_transp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="9"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="74"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="109"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="157"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="204"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="237"/>
            <end position="263"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="269"/>
            <end position="293"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ64937.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="304" mass="32174" checksum="5523EAF7BD4ADC51" modified="2015-12-09" version="1">MIQHLVDGILVGSFLSLGAIGLTMAMHILRFANFSHAELLSIGAYCALVFDKVFESLLPVLAAKIGPLSMTGALAISIVLSMAITGLSAVLIDRFIFQRVRQKGEELSMVFASFGMALIIRNIIGLVFGLSAELYSRDIAFAMILSRDPLLLVKPDQVFVLIAALILMFALHLVLSRTTFGFSLRAVAENPSLAQVHGVNLKRMIAAVWIIGGGLGAVAGIFYGLSYQITPVMGRDLVLPIFAATIVGGIGSVYGAVLGGFIVGIASNLALVILPSGYSPSVPFLMILAVLLVRPNGLFGEARA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRR4</accession>
    <name>A0A0M6ZRR4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha</fullName>
            <ecNumber evidence="4">1.1.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">acoA_2</name>
        <name evidence="4" type="ORF">LAX5112_00485</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>thiamine diphosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58937"/>
        </cofactor>
    </comment>
    <dbReference type="EC" id="1.1.1.-" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65027.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00485"/>
    <dbReference type="EnsemblBacteria" id="CTQ65027">
        <property type="protein sequence ID" value="CTQ65027"/>
        <property type="gene ID" value="LAX5112_00485"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016624">
        <property type="term" value="F:oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001017">
        <property type="entry name" value="DH_E1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029061">
        <property type="entry name" value="THDP-binding"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00676">
        <property type="entry name" value="E1_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52518">
        <property type="entry name" value="SSF52518"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 4" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="E1_dh" evidence="3">
        <location>
            <begin position="18"/>
            <end position="316"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001964"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ65027.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="339" mass="37383" checksum="A270CD4B6D6A88A3" modified="2015-12-09" version="1">MSDTRTHNTEDYLRMYKQMVRIRAFEDNSNQLYLSAKMPGLTHMYSGQEAVAVGICEALTDEDRITSTHRGHGHCVAKGADFKAMFCELLGKEEGYCRGKGGSMHIADQSHGNLGANAIVGGSMGIATGAALSAKHLGKDFVTVCFFGDGATAQGLWYEVMNMAALWKLPVIYACENNGYSEYTKTEEIAAGSLTARAEAFGIEAYEVDGQDVLAVNELTTQLVERCRKGEGPFFMELKTYRYHGHHVGDINRDYYRSKDEEAEWKNVRDPITNFGKWLEDQNILSADELAAINNEIAADAKNAVDYALNAPYPDPSEVDMHVFADVDHALEYLGGARG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRU8</accession>
    <name>A0A0M6ZRU8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Lactose transport system permease protein LacF</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">lacF_1</name>
        <name evidence="7" type="ORF">LAX5112_00628</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65448.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670583.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00628"/>
    <dbReference type="EnsemblBacteria" id="CTQ65448">
        <property type="protein sequence ID" value="CTQ65448"/>
        <property type="gene ID" value="LAX5112_00628"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="20"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="83"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="116"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="163"/>
            <end position="188"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="209"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="273"/>
            <end position="294"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="78"/>
            <end position="292"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ65448.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="303" mass="34642" checksum="FA8937449332BA89" modified="2015-12-09" version="1">MAYAKDGHQTSWWHRNQQQLTPWLFLAPGILFFLFYVIFPIFQSFNLSLYEWDGLGEAEFVGLYNYEELYWDDAFYTSLKNNVIWLVLYLAAIPAGLFIALFLNQTVTGIRLYKSLFFFPFVISQVVVGLVFTWFYDPTFGILNVLLGSVGLPPVNVLGDENWVTIGIIVAGLWPQTAYCMILYLTGLNAVDPEQIEAGRLDGAKGWRMLWYIIIPQLRPATFIAFVVTIIGALRSFDLISIMTNGGPFGASRVLSFYMFEVALSEYGFRMGYGAAIAVVLFLIMLMFIAYFLWSMYKEEKAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZS17</accession>
    <name>A0A0M6ZS17_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00474</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64996.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670426.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ64996">
        <property type="protein sequence ID" value="CTQ64996"/>
        <property type="gene ID" value="LAX5112_00474"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="131"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="138"/>
            <end position="160"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64996.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="266" mass="29789" checksum="422913163000BBC3" modified="2015-12-09" version="1">MPLLQQNDILFAHKALGLMPDLSAATRRVAAAIVDHFNKRTGQCDPSIGRIMKLLKISRAAVIRATNELDELGLIEKKSHGGKSHRTAYSPNWPMFRAFVDDWDAGMKSGEGPAPTFETVSDLIPSKSQSCDLRGLRNETQTNRKNHSKKPIEHCRVDNKPRTSNPNLSRTKDPKGLLKKEQEETEKYISLPPQGRQSLTRSEVARDKAQQRWEGDFMKQREAQKVTIVEWLTADRMDKVTDAEIDQPGGGLTFILGEMGEALGCI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSE1</accession>
    <name>A0A0M6ZSE1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Putative MscS family protein YkuT</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">ykuT_1</name>
        <name evidence="10" type="ORF">LAX5112_00524</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the MscS (TC 1.A.23) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65141.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670469.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00524"/>
    <dbReference type="EnsemblBacteria" id="CTQ65141">
        <property type="protein sequence ID" value="CTQ65141"/>
        <property type="gene ID" value="LAX5112_00524"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008381">
        <property type="term" value="F:mechanosensitive ion channel activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010920">
        <property type="entry name" value="LSM_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006685">
        <property type="entry name" value="MscS_channel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011066">
        <property type="entry name" value="MscS_channel_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011014">
        <property type="entry name" value="MscS_channel_TM-2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023408">
        <property type="entry name" value="MscS_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045276">
        <property type="entry name" value="YbiO_bact"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30460">
        <property type="entry name" value="PTHR30460"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00924">
        <property type="entry name" value="MS_channel"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50182">
        <property type="entry name" value="SSF50182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82689">
        <property type="entry name" value="SSF82689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82861">
        <property type="entry name" value="SSF82861"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0346">Stress response</keyword>
    <keyword evidence="4 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 9" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="6"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="110"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="135"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="188"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="218"/>
            <end position="237"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="257"/>
            <end position="277"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="289"/>
            <end position="306"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="333"/>
            <end position="353"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="359"/>
            <end position="378"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="414"/>
            <end position="431"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="451"/>
            <end position="471"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="505"/>
            <end position="527"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="533"/>
            <end position="562"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="719"/>
            <end position="747"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008017"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ65141.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="747" mass="80704" checksum="BAECF01E786B33E3" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSE5</accession>
    <name>A0A0M6ZSE5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00528</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65151.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670472.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00528"/>
    <dbReference type="EnsemblBacteria" id="CTQ65151">
        <property type="protein sequence ID" value="CTQ65151"/>
        <property type="gene ID" value="LAX5112_00528"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="10"/>
            <end position="158"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65151.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="179" mass="19287" checksum="436955A69F2E6759" modified="2015-12-09" version="1">MNKDGTTSDITIRELTPADEKAVEALLLSVYPSDMEARLVHKLRHCGALVLEQVAVEPDGAFLGHIAFSRVTNTTIGANQAVQVACLAPVSIRAGEQRKGIGSRLIYSSMKRLGELQEDLVLVLGPPSYFPRFGFDAELAKKVHGPYAGAAFMAAPLTEAGSNNLPIEVTFATPFEEFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSU2</accession>
    <name>A0A0M6ZSU2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Putative L,D-transpeptidase ErfK/SrfK</fullName>
            <ecNumber evidence="7">2.-.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">erfK_1</name>
        <name evidence="7" type="ORF">LAX5112_00331</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Cell wall biogenesis; peptidoglycan biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the YkuD family.</text>
    </comment>
    <dbReference type="EC" id="2.-.-.-" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64594.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008195366.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00331"/>
    <dbReference type="EnsemblBacteria" id="CTQ64594">
        <property type="protein sequence ID" value="CTQ64594"/>
        <property type="gene ID" value="LAX5112_00331"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00219"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071972">
        <property type="term" value="F:peptidoglycan L,D-transpeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd16913">
        <property type="entry name" value="YkuD_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.440.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005490">
        <property type="entry name" value="LD_TPept_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038063">
        <property type="entry name" value="Transpep_catalytic_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03734">
        <property type="entry name" value="YkuD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141523">
        <property type="entry name" value="SSF141523"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0732">Signal</keyword>
    <keyword evidence="3 7" id="KW-0808">Transferase</keyword>
    <feature type="signal peptide" evidence="5">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809056" evidence="5">
        <location>
            <begin position="32"/>
            <end position="256"/>
        </location>
    </feature>
    <feature type="domain" description="YkuD" evidence="6">
        <location>
            <begin position="128"/>
            <end position="255"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="60"/>
            <end position="108"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004752"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF03734"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ64594.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="256" mass="28584" checksum="B2906C9DF0C6A3F3" modified="2015-12-09" version="1">MFSLSKSVPVAVIAAGLALVASGFASGPALAGQVSPPPLVLSPNLTEPWMLQLQPRVQRRTAAPTRRQVQQPRVQRQVQQPRVQRANWWSPRQQPVRQQQQQRTQTRQVAPQFLPTIVSYDSKYKPGTIVIDTNARYLYLIQNDGTARRYGVGVGKPGFEWAGSHKVTRKAEWPDWRPPAAMRKRRPELPVFMAGGPDNPLGARALYLGSTLYRIHGSNQPWTIGHAVSSGCIRMRNEDVIDLYERVGVGTTVHVI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTF9</accession>
    <name>A0A0M6ZTF9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Alkanesulfonate transporter substrate-binding subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_00670</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65542.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670618.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00670"/>
    <dbReference type="EnsemblBacteria" id="CTQ65542">
        <property type="protein sequence ID" value="CTQ65542"/>
        <property type="gene ID" value="LAX5112_00670"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017793">
        <property type="entry name" value="ABC_transptr_urea-assoc_sub-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015168">
        <property type="entry name" value="SsuA/THI5"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09084">
        <property type="entry name" value="NMT1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03427">
        <property type="entry name" value="ABC_peri_uca"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005808950" evidence="1">
        <location>
            <begin position="26"/>
            <end position="352"/>
        </location>
    </feature>
    <feature type="domain" description="NMT1" evidence="2">
        <location>
            <begin position="59"/>
            <end position="241"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF09084"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ65542.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="352" mass="37694" checksum="A6A1496CB8487CA7" modified="2015-12-09" version="1">MLKSIAKASLLAAALSMPLSFSAQAEVKTDFKVCWSIYVGWMPWGYLQDSGIMKKWADKYGIDVEIVQINDYVESINQYTAGEYDGCSMTNMDALSIPAGGGVDTTALIVGDYSNGNDGIILKDETELAEIKGQTVNLVELSVSHYLLARALDTVGLTERDLTVVNTSDADMIAAYATPDVTSVVTWNPLLSEIEAQPNATKVFDSAGIPGEIIDIMMVNTETLADNPAFGKALTGAWYEVMDLMAEGDETALTAMAEASGTDLAGYKAQLATTKMFYSPAEAMEFSKSAELPKTMKFVAEFLFDKGILGEGAPSPEFVGVSFADGSVYGDGNNVKLRFDPSFMEMAASGSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTT1</accession>
    <name>A0A0M6ZTT1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Leucine-responsive regulatory protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">lrp_1</name>
        <name evidence="5" type="ORF">LAX5112_00448</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64924.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00448"/>
    <dbReference type="EnsemblBacteria" id="CTQ64924">
        <property type="protein sequence ID" value="CTQ64924"/>
        <property type="gene ID" value="LAX5112_00448"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000485">
        <property type="entry name" value="AsnC-type_HTH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019888">
        <property type="entry name" value="Tscrpt_reg_AsnC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019887">
        <property type="entry name" value="Tscrpt_reg_AsnC/Lrp_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019885">
        <property type="entry name" value="Tscrpt_reg_HTH_AsnC-type_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01037">
        <property type="entry name" value="AsnC_trans_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00033">
        <property type="entry name" value="HTHASNC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00344">
        <property type="entry name" value="HTH_ASNC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00519">
        <property type="entry name" value="HTH_ASNC_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50956">
        <property type="entry name" value="HTH_ASNC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH asnC-type" evidence="4">
        <location>
            <begin position="5"/>
            <end position="66"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50956"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ64924.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="170" mass="19336" checksum="679AB759DADA4B50" modified="2015-12-09" version="1">MTLKLDDRDLKILAALSKEGRLSKAELAKRVNLSPTPLWERLKRLEKHGIISGYRAEISLKQVAPHIEVFVTVELEDHRSESFQQFERMVDLHDEIVACWAIGGGLDYILNIITRDIDSYQRLIDTLLAGKTGLARYYTYVVTKPVKSRAQLPLHSLLQDDPVSNPASNR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZU91</accession>
    <name>A0A0M6ZU91_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">4-hydroxy-tetrahydrodipicolinate synthase</fullName>
            <ecNumber evidence="2">4.3.3.7</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">dapA_2</name>
        <name evidence="2" type="ORF">LAX5112_00752</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the DapA family.</text>
    </comment>
    <dbReference type="EC" id="4.3.3.7" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65776.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670677.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00752"/>
    <dbReference type="EnsemblBacteria" id="CTQ65776">
        <property type="protein sequence ID" value="CTQ65776"/>
        <property type="gene ID" value="LAX5112_00752"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008840">
        <property type="term" value="F:4-hydroxy-tetrahydrodipicolinate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002220">
        <property type="entry name" value="DapA-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12128">
        <property type="entry name" value="PTHR12128"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00701">
        <property type="entry name" value="DHDPS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001365">
        <property type="entry name" value="DHDPS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00146">
        <property type="entry name" value="DHPICSNTHASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM01130">
        <property type="entry name" value="DHDPS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 2" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRNR" id="PIRNR001365"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65776.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="319" mass="34384" checksum="4027761B6BA35AEA" modified="2015-12-09" version="1">MSSNIFSGTIPALMTPCNADRTPDFDALVKKGQELISKGMSAVVYCGSMGDWPLLTDTERMEGVERLVKAGVPTIVGTGAVNTKSAVSHARHAAEVGAHGLMVIPRVLSRGISPIAQRNHFSAILSAAPNLPAVIYNSPYYGFATRADLFFDLRKEFPSLIGFKEFGGHDDLRYAAENITSQDADVTLMVGVDTAVYHGFVNCGATGAITGIGNALPDAVLHLVSLCKKAAEGNAEARTRAKELEEALGVLSSFDEGPDLVLYYKHLLVLNGEDEYRLHFNETDALTDAQRGYIEAQYQLFKTWYADWCGQGGVLAECA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZUH2</accession>
    <name>A0A0M6ZUH2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 13">Membrane protein insertase YidC</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="12 13">Foldase YidC</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="11 13">Membrane integrase YidC</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="13">Membrane protein YidC</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="13 16" type="primary">yidC</name>
        <name evidence="16" type="ORF">LAX5112_00511</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="17" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="13">Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.</text>
    </comment>
    <comment type="subunit">
        <text evidence="13">Interacts with the Sec translocase complex via SecD. Specifically interacts with transmembrane segments of nascent integral membrane proteins during membrane integration.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="13">Cell membrane</location>
            <topology evidence="13">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 13">Belongs to the OXA1/ALB3/YidC family. Type 1 subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65103.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00511"/>
    <dbReference type="EnsemblBacteria" id="CTQ65103">
        <property type="protein sequence ID" value="CTQ65103"/>
        <property type="gene ID" value="LAX5112_00511"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032977">
        <property type="term" value="F:membrane insertase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015031">
        <property type="term" value="P:protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.70.98.90">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01810">
        <property type="entry name" value="YidC_type1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019998">
        <property type="entry name" value="Membr_insert_YidC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028055">
        <property type="entry name" value="Membr_insert_YidC/Oxa1_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028053">
        <property type="entry name" value="Membr_insert_YidC_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001708">
        <property type="entry name" value="YidC/ALB3/OXA1/COX18"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038210">
        <property type="entry name" value="YidC_periplasmic"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038221">
        <property type="entry name" value="YidC_periplasmic_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12428">
        <property type="entry name" value="PTHR12428"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02096">
        <property type="entry name" value="60KD_IMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14849">
        <property type="entry name" value="YidC_periplas"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00701">
        <property type="entry name" value="60KDINNERMP"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01900">
        <property type="entry name" value="YIDCPROTEIN"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03593">
        <property type="entry name" value="yidC_nterm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03592">
        <property type="entry name" value="yidC_oxa1_cterm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 13" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="10 13" id="KW-0143">Chaperone</keyword>
    <keyword evidence="9 13" id="KW-0472">Membrane</keyword>
    <keyword evidence="7 13" id="KW-0653">Protein transport</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 13" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8 13" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4 13" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="377"/>
            <end position="403"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="447"/>
            <end position="467"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="510"/>
            <end position="530"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="542"/>
            <end position="567"/>
        </location>
    </feature>
    <feature type="domain" description="YidC_periplas" evidence="15">
        <location>
            <begin position="93"/>
            <end position="372"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="14">
        <location>
            <begin position="38"/>
            <end position="84"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00015325"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00033245"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00033342"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01810"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="Pfam" id="PF14849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="CTQ65103.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="608" mass="67474" checksum="53BC430ACB5E84D5" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWA9</accession>
    <name>A0A0M6ZWA9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Carbon starvation induced regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">csiR_1</name>
        <name evidence="5" type="ORF">LAX5112_00747</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65763.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670674.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00747"/>
    <dbReference type="EnsemblBacteria" id="CTQ65763">
        <property type="protein sequence ID" value="CTQ65763"/>
        <property type="gene ID" value="LAX5112_00747"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07377">
        <property type="entry name" value="WHTH_GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.530">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011711">
        <property type="entry name" value="GntR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008920">
        <property type="entry name" value="TF_FadR/GntR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000524">
        <property type="entry name" value="Tscrpt_reg_HTH_GntR"/>
    </dbReference>
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        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
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        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07729">
        <property type="entry name" value="FCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00392">
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00895">
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00345">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
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    </dbReference>
    <dbReference type="SUPFAM" id="SSF48008">
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        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50949">
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        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH gntR-type" evidence="4">
        <location>
            <begin position="12"/>
            <end position="79"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ65763.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="219" mass="24323" checksum="0537529E9C8A2476" modified="2015-12-09" version="1">MKLKSMDISATASASSIVFDALRNAIIEGQLEEGEPLRQDEIARLFNTSRIPVREAISRLEEQGLVKTQRYKGAVVAGLSPEEVEEIFNLRALVEPEIIKNAVPRMSKEVLDQARAKCSAFSESKDPMEWGNLNRDFHETLYSASNLSYFLEIAGNAIDRVERQIRAQLVMSNGMERAGREHFAILDACESGEADTAAELTKAHIEGAKKSLLQFLPKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWU1</accession>
    <name>A0A0M6ZWU1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01279</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67229.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671111.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67229">
        <property type="protein sequence ID" value="CTQ67229"/>
        <property type="gene ID" value="LAX5112_01279"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67229.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="60" mass="6899" checksum="A3A43E0AF4762F36" modified="2015-12-09" version="1">MQQRYDIREEEDGMWTVFDIFTGLPAEVNGEILIGLDIQEADDAVDLMNAIDLKRRGEIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWU8</accession>
    <name>A0A0M6ZWU8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Spermidine synthase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00994</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66510.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670901.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00994"/>
    <dbReference type="EnsemblBacteria" id="CTQ66510">
        <property type="protein sequence ID" value="CTQ66510"/>
        <property type="gene ID" value="LAX5112_00994"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ66510.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="243" mass="26588" checksum="E0E947D1B68BA945" modified="2015-12-09" version="1">MSKMFEELDYAPTPIGAVSLRRRHLLALKTDVFEILLGEEHLMSSLFTASEVALADLGVDALSGDGLEVLVGGLGLGYTAQAVLAHDTVSSLTVVDLLEPVIRWHQEGLVPMQTELVDDPRCQLVQGDFFALSASEDGFDATRPKRQYDAVLIDIDHTPERLLHSGSKGFYSQEGFTAVQRFLKPGGVVGLWSDEAPDAAITAKLAEAFDEAWAEPVVFENPLQDGREVTQSVYLGRKTTNWQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXA9</accession>
    <name>A0A0M6ZXA9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00900</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66184.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670786.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00900"/>
    <dbReference type="EnsemblBacteria" id="CTQ66184">
        <property type="protein sequence ID" value="CTQ66184"/>
        <property type="gene ID" value="LAX5112_00900"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004573">
        <property type="term" value="F:Glc3Man9GlcNAc2 oligosaccharide glucosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009311">
        <property type="term" value="P:oligosaccharide metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.50.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008928">
        <property type="entry name" value="6-hairpin_glycosidase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012341">
        <property type="entry name" value="6hp_glycosidase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004888">
        <property type="entry name" value="Glycoside_hydrolase_63"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10412">
        <property type="entry name" value="PTHR10412"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48208">
        <property type="entry name" value="SSF48208"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ66184.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="429" mass="48240" checksum="39FA0DC50AEC6063" modified="2015-12-09" version="1">MSQIELDQVARKILTDNDQGGYTVPTKGLYPYQWNWDSVFVARGFATFDTDRAWREIELLFEGQWRDGMVPHILFRKDDPSYFPGPSVWGTDGGPIPSSGHSQPPVAATIVRDLVELDASDAALDRAKLLFPKILQWHRWFMAYRDPDNLGVIAVIHPWESGRDNLPDWDDALRGVEIKDVAPYERKDTSHVDPAMRPHKEDYDRYLSIVAACRKVGWEPEKVARTCPFFVADPGITFILLRACRDLLALADRLGETAAQPEVEGWISRMETGAARLWNSELKAHVAMNLRTGKQSDGVSSASFLAPYAGLTDPEVLKPLREHFDRISAKVRYLMPSYDPEHQAYEHLRYWRGPVWAMVNFMIARGFAEAGDPGRSGRLRRDTAALIQTGGFAEYFSPETAEAAGGGSFSWTAAIWLAWARPSQADQAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXG5</accession>
    <name>A0A0M6ZXG5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">LIV-I protein F</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">livF_6</name>
        <name evidence="6" type="ORF">LAX5112_00922</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66244.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670806.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00922"/>
    <dbReference type="EnsemblBacteria" id="CTQ66244">
        <property type="protein sequence ID" value="CTQ66244"/>
        <property type="gene ID" value="LAX5112_00922"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="6"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="38"/>
            <end position="45"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ66244.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="241" mass="25863" checksum="7C6F01E582997BFB" modified="2015-12-09" version="1">MPDTLLSLSGVHTHIGPYHILQGVDLIVPEGGVTVLLGRNGAGKTTTLRTIMGLWTASQGEIHFADHNITRLDTPAIAGRGIAFVPEDMGIFTDLTVEENMILAAANGTMDPKRLSWIKELFPPIGSFWNSSAGTLSGGQKQMLSVARAIIEPRRLILIDEPTKGLAPAIINAMTDALRQLKNTDTTILLVEQNFSMASNIGDTVAVMDDGRIIHSGGMAELAANSEMQERLMGLSLEAHQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXU6</accession>
    <name>A0A0M6ZXU6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01215</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67107.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671054.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01215"/>
    <dbReference type="EnsemblBacteria" id="CTQ67107">
        <property type="protein sequence ID" value="CTQ67107"/>
        <property type="gene ID" value="LAX5112_01215"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67107.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="286" mass="31252" checksum="123EEB827823ABDF" modified="2015-12-09" version="1">MLHWLRKVRVSIEGGPRINPGGLDGPQIRVQFKVSKTISGSPNQIEVKLFNLSKSSRNSIGKEFQGLTLEAGYLPPQGGGNVGIIGKGRIRDVESERVGPDIITTIYCGDGDKAFRKATISETIQKGTPIPDVVERIFEDLQKQGIGRGEWKFPDDIRTLKRPYSMCGACVRELNTLGRGNGFYWSIQNEVLEIIPSDGFLSGTLRINEDTGMIGSPTVTDNGVKVSAQLNPDARPNRLFQYQSEFASGMARASTVDFDGDNQEGDFKMTLHGESASGSKVDEGVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="31" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXZ1</accession>
    <name>A0A0M6ZXZ1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 10">Phosphoglycolate phosphatase</fullName>
            <shortName evidence="10">PGP</shortName>
            <shortName evidence="10">PGPase</shortName>
            <ecNumber evidence="5 10">3.1.3.18</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">gph_1</name>
        <name evidence="11" type="ORF">LAX5112_00966</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Specifically catalyzes the dephosphorylation of 2-phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 10">
            <text>2-phosphoglycolate + H2O = glycolate + phosphate</text>
            <dbReference type="Rhea" id="RHEA:14369"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:29805"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58033"/>
            <dbReference type="EC" id="3.1.3.18"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 10">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="3 10">Organic acid metabolism; glycolate biosynthesis; glycolate from 2-phosphoglycolate: step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4 10">Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.18" evidence="5 10"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66433.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670883.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00966"/>
    <dbReference type="EnsemblBacteria" id="CTQ66433">
        <property type="protein sequence ID" value="CTQ66433"/>
        <property type="gene ID" value="LAX5112_00966"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00865">
        <property type="reaction ID" value="UER00834"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008967">
        <property type="term" value="F:phosphoglycolate phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046295">
        <property type="term" value="P:glycolate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.240">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00495">
        <property type="entry name" value="GPH_hydrolase_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006439">
        <property type="entry name" value="HAD-SF_hydro_IA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041492">
        <property type="entry name" value="HAD_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023198">
        <property type="entry name" value="PGP-like_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006346">
        <property type="entry name" value="PGPase/MupP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037512">
        <property type="entry name" value="PGPase_prok"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13419">
        <property type="entry name" value="HAD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01549">
        <property type="entry name" value="HAD-SF-IA-v1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01449">
        <property type="entry name" value="PGP_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 10" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="7 10 11" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="8 10" id="KW-0460">Magnesium</keyword>
    <keyword evidence="6 10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" description="Nucleophile" evidence="10">
        <location>
            <position position="7"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="7"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="9"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="169"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000830"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004818"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00006171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00013078"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00495"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ66433.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="220" mass="23510" checksum="7A13060D5A6DB589" modified="2015-12-09" version="1">MSVLVFDLDGTLVSSMEDLVATLNAVLEKAGHGTVPQDKVANMVGMGAKVLLQRGLDYLDIAWSDEMIIPLYEDFLDYYAANIAVHTRPFDGVIPALQRFRADGWKLAVCTNKTERLTLPLLAALNMTDHFDAVVGGDTFSVSKPHAEPVLGAIQRAGGTLEGSIMIGDSVTDINAARAAGIPVVAVDFGYTPVPVTELGPDRIISHFDELADAVDGVRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYP3</accession>
    <name>A0A0M6ZYP3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01240</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67160.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671076.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67160">
        <property type="protein sequence ID" value="CTQ67160"/>
        <property type="gene ID" value="LAX5112_01240"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ67160.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="304" mass="35238" checksum="527E395592C8C635" modified="2015-12-09" version="1">MWPKPEFPLYIPSKGRAQYMITSKALTRIGVRHSVVVEPQEAKEYRAAAKDLLCDIVVLDLSYKERYELCDDLGLTKSTGPGPARNFIWEHSIAQGHEWHWVMDDNISTFYRLNRNMKTPIGDGTSFHVMEDFVLRYRNVAMAGPNYECFTPRKEKHYPFIANTRIYSCNLIRNDVPFRWRGRYNEDTILSLDMLKAGWCTVQFNAFLQKKLETQLLRGGNTAEFYHAEGEIKPGQKYASGGTTAKSEMLVKVHPDVSRLAWRFGRVHHHVDYRPFRKNRLIKREGLEVPAGTDNYGMSLKVIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZ09</accession>
    <name>A0A0M6ZZ09_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">2-aminoethylphosphonate--pyruvate transaminase</fullName>
            <ecNumber evidence="4">2.6.1.37</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">2-aminoethylphosphonate aminotransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="4">AEP transaminase</fullName>
            <shortName evidence="4">AEPT</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="4 7" type="primary">phnW</name>
        <name evidence="7" type="ORF">LAX5112_01431</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Involved in phosphonate degradation.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>(2-aminoethyl)phosphonate + pyruvate = L-alanine + phosphonoacetaldehyde</text>
            <dbReference type="Rhea" id="RHEA:17021"/>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
            <dbReference type="ChEBI" id="CHEBI:57418"/>
            <dbReference type="ChEBI" id="CHEBI:57972"/>
            <dbReference type="ChEBI" id="CHEBI:58383"/>
            <dbReference type="EC" id="2.6.1.37"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 4 5">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="4">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily.</text>
    </comment>
    <dbReference type="EC" id="2.6.1.37" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67557.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671260.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01431"/>
    <dbReference type="EnsemblBacteria" id="CTQ67557">
        <property type="protein sequence ID" value="CTQ67557"/>
        <property type="gene ID" value="LAX5112_01431"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047304">
        <property type="term" value="F:2-aminoethylphosphonate-pyruvate transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019700">
        <property type="term" value="P:organic phosphonate catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01376">
        <property type="entry name" value="PhnW_aminotrans_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000192">
        <property type="entry name" value="Aminotrans_V_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012703">
        <property type="entry name" value="NH2EtPonate_pyrv_transaminase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024169">
        <property type="entry name" value="SP_NH2Trfase/AEP_transaminase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00266">
        <property type="entry name" value="Aminotran_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000524">
        <property type="entry name" value="SPT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03301">
        <property type="entry name" value="PhnW-AepZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02326">
        <property type="entry name" value="transamin_PhnW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="2 4 5" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="3 4 7" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Aminotran_5" evidence="6">
        <location>
            <begin position="64"/>
            <end position="302"/>
        </location>
    </feature>
    <feature type="modified residue" description="N6-(pyridoxal phosphate)lysine" evidence="4 5">
        <location>
            <position position="204"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023317"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01376"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR000524-50"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00266"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ67557.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="395" mass="42345" checksum="508A6016D7D0EFF5" modified="2015-12-09" version="1">MTQQPTALPKPKLGEPYLLTPGPLTTSIDVKEAMLRDWGSWDGDFKAMTAELRKGLISLLGDGSEAYDCVPIQGSGTFAVEAMLGSFTPKTKKTLILSNGAYGKRAVETMAYLGRPVEVLDKGDYLPPRGPEVAALLKADPEISHVLIVHCETSSGILNPLQEISDAVAAAGRTLLIDSMSAFGAIPVEPSKLQFAAMVSSANKCIEGVPGFGFVIAHRAELEAAKGNSHSISLDVHAQWAHMEKSGQWRFTPPTHVVAAFLEALRAHKAEGGVAARGARYRTNRDVMVSGMRALGFETLLDAEWLSPIIVTFFCPADPAFSFPRFYELMKARGFILYPGKLTVVDSFRVGCIGQMDEHVMRGVTAAASDVLKEMGVESAAPPAEALAERAKLAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZ73</accession>
    <name>A0A0M6ZZ73_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01458</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67627.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67627">
        <property type="protein sequence ID" value="CTQ67627"/>
        <property type="gene ID" value="LAX5112_01458"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="15"/>
            <end position="33"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67627.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="236" mass="26495" checksum="C789BA988C667944" modified="2015-12-09" version="1">MIRPTLPAPTNAKPLHFAMLATALCVLTFAHVAERGYHWFMRAAPLFQSTPRNALVSVTMGPDHFKIPAGYFKSATHRITAQGEANRYQQISLLMTWPNLRMPGEDNTPSRLGTPLPLIQVDLEHDPHRETLRTQLDPVYKRLARGGARPTTAGLNMLMLSSRAAQNRDIIVYDPEARDGFIARCVKKRSGAKAVCHRTVTPGGGRLIRYQFDQTLLPSWRELDEAIKAKVRGFRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZB8</accession>
    <name>A0A0M6ZZB8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">V8-like Glu-specific endopeptidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01434</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ67566.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671263.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01434"/>
    <dbReference type="EnsemblBacteria" id="CTQ67566">
        <property type="protein sequence ID" value="CTQ67566"/>
        <property type="gene ID" value="LAX5112_01434"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004252">
        <property type="term" value="F:serine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.10.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009003">
        <property type="entry name" value="Peptidase_S1_PA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043504">
        <property type="entry name" value="Peptidase_S1_PA_chymotrypsin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001314">
        <property type="entry name" value="Peptidase_S1A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001254">
        <property type="entry name" value="Trypsin_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018114">
        <property type="entry name" value="TRYPSIN_HIS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00089">
        <property type="entry name" value="Trypsin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00722">
        <property type="entry name" value="CHYMOTRYPSIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00020">
        <property type="entry name" value="Tryp_SPc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50494">
        <property type="entry name" value="SSF50494"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50240">
        <property type="entry name" value="TRYPSIN_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00134">
        <property type="entry name" value="TRYPSIN_HIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809049" evidence="1">
        <location>
            <begin position="40"/>
            <end position="274"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase S1" evidence="2">
        <location>
            <begin position="7"/>
            <end position="255"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50240"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ67566.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="274" mass="28813" checksum="60BA0C83E24456F7" modified="2015-12-09" version="1">MAGPSGIISGNGIMRRTLAVAYAAVLALACLAPSDTAVAAEPALKVIDSTDAPWPSIGRVNVAGYRTTSMCTGTLIAPNIVLTAAHCLYNKATLKKFPEDDMFFIAGVRRDEFSARVEVACALSAEGYTPKKQTKLADVHTDVGILILKESANLPAVPVLSPEDAGVLTRDTRFDSAGYRRSRRFLPTVVSACQVIGTVEDSWVTNCSSESGASGGPLLVETPDGLRVAGVMSAKIDDIRSAIVPFFEWQELLASPVCPASGDAAQTALRPSID</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZE4</accession>
    <name>A0A0M6ZZE4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01671</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68198.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671432.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01671"/>
    <dbReference type="EnsemblBacteria" id="CTQ68198">
        <property type="protein sequence ID" value="CTQ68198"/>
        <property type="gene ID" value="LAX5112_01671"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019285">
        <property type="entry name" value="DUF2336"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10098">
        <property type="entry name" value="DUF2336"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ68198.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="366" mass="40794" checksum="85E76F0A36F45548" modified="2015-12-09" version="1">MLIEQLEQLARIKEPEARSKLIRTLVGEYARSEDHDPTENERELFSRIVLSVFDQLDRSARYELVVRLAKTNRIIPDLADRLAQEDFALSEPVIECSPVISQDALMAIATNGGDDKRAVMAHRADLSEEVTDKLIARSARPVVHALLENLDAPFSVRGVLALLIFANTEVEVLGGLARRALRDSEFLETQMQILETNCPIFPAPLKRAIEEDTLEKLAAQINNIKRGEGDIEIDGIIYSRHEASVQIANGELSFDAILRTLFEEQRLDAAIWLISRKINLSDDVVSDTLKSDADGAIMRLMLQTGIHEKTYRDFLKARCEWLDRSTRSIPELVMRYKKELKKPRASAAAAAAAAAAATLGATVTAH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZI5</accession>
    <name>A0A0M6ZZI5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01154</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66953.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671005.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ66953">
        <property type="protein sequence ID" value="CTQ66953"/>
        <property type="gene ID" value="LAX5112_01154"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809051" evidence="1">
        <location>
            <begin position="30"/>
            <end position="139"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66953.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="139" mass="15225" checksum="833F3E667425BEEB" modified="2015-12-09" version="1">MISGRQIPATGKALLALLCLGLASCQTSTNPEFKSTYVGKPSADFFLKYGPPSDVIAYDAIPKGADPINYPGGDPKELVYYWSSINERTYTEKKNPKPLTDECNLAILTRADGKIVRMEVQSTSTPLEKVKAYCETIVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0E3</accession>
    <name>A0A0M7A0E3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">tRNA dimethylallyltransferase</fullName>
            <ecNumber evidence="5">2.5.1.75</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Dimethylallyl diphosphate:tRNA dimethylallyltransferase</fullName>
            <shortName evidence="5">DMAPP:tRNA dimethylallyltransferase</shortName>
            <shortName evidence="5">DMATase</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="5">Isopentenyl-diphosphate:tRNA isopentenyltransferase</fullName>
            <shortName evidence="5">IPP transferase</shortName>
            <shortName evidence="5">IPPT</shortName>
            <shortName evidence="5">IPTase</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5 9" type="primary">miaA</name>
        <name evidence="9" type="ORF">LAX5112_01614</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2 5 7">Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 5 6">
            <text>adenosine(37) in tRNA + dimethylallyl diphosphate = diphosphate + N(6)-dimethylallyladenosine(37) in tRNA</text>
            <dbReference type="Rhea" id="RHEA:26482"/>
            <dbReference type="Rhea" id="RHEA-COMP:10162"/>
            <dbReference type="Rhea" id="RHEA-COMP:10375"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57623"/>
            <dbReference type="ChEBI" id="CHEBI:74411"/>
            <dbReference type="ChEBI" id="CHEBI:74415"/>
            <dbReference type="EC" id="2.5.1.75"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="5">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="5">Monomer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 5 8">Belongs to the IPP transferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.75" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68041.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01614"/>
    <dbReference type="EnsemblBacteria" id="CTQ68041">
        <property type="protein sequence ID" value="CTQ68041"/>
        <property type="gene ID" value="LAX5112_01614"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052381">
        <property type="term" value="F:tRNA dimethylallyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008033">
        <property type="term" value="P:tRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00185">
        <property type="entry name" value="IPP_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039657">
        <property type="entry name" value="Dimethylallyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018022">
        <property type="entry name" value="IPT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11088">
        <property type="entry name" value="PTHR11088"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00174">
        <property type="entry name" value="miaA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0460">Magnesium</keyword>
    <keyword evidence="5 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5 8" id="KW-0808">Transferase</keyword>
    <keyword evidence="5 6" id="KW-0819">tRNA processing</keyword>
    <feature type="region of interest" description="Interaction with substrate tRNA" evidence="5">
        <location>
            <begin position="17"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="region of interest" description="Interaction with substrate tRNA" evidence="5">
        <location>
            <begin position="140"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="site" description="Interaction with substrate tRNA" evidence="5">
        <location>
            <position position="83"/>
        </location>
    </feature>
    <feature type="site" description="Interaction with substrate tRNA" evidence="5">
        <location>
            <position position="105"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001549"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00003213"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00185"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003783"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003784"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU003785"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ68041.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="290" mass="32294" checksum="82E1345D1BF5D371" modified="2015-12-09" version="1">MAIELAKRVNGVVVNADSMQLYEDLRLVSARPSEDEEAEVPHRLYGVLPSSEAFSTGAWLRRMSDELEPIWSAGQIPVLVGGTGLYFKALTEGFAELPEIPEDVRVKARSLADDGGVSELKAALAEAGDRDGAEGLNDPQRLARALEVLLTTGRPLAELQTEQQSPPLLDIKHCLCLVLAPPRPWLHERIEKRTRLMLSLEGIEEVKTLLARELSYKLPAMRAIGVKEIAGLLTGGSDIGETEYRLVVATRQYAKRQETWFRNQMPDWQRLDPSNEIDTARIADEFLRAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0V6</accession>
    <name>A0A0M7A0V6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Flagellar L-ring protein</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Basal body L-ring protein</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8" type="primary">flgH_1</name>
        <name evidence="6" type="synonym">flgH</name>
        <name evidence="8" type="ORF">LAX5112_01680</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 6">Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">The basal body constitutes a major portion of the flagellar organelle and consists of four rings (L,P,S, and M) mounted on a central rod.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cell outer membrane</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="6">Bacterial flagellum basal body</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the FlgH family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68221.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008190897.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01680"/>
    <dbReference type="EnsemblBacteria" id="CTQ68221">
        <property type="protein sequence ID" value="CTQ68221"/>
        <property type="gene ID" value="LAX5112_01680"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009427">
        <property type="term" value="C:bacterial-type flagellum basal body, distal rod, L ring"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009279">
        <property type="term" value="C:cell outer membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003774">
        <property type="term" value="F:cytoskeletal motor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071973">
        <property type="term" value="P:bacterial-type flagellum-dependent cell motility"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00415">
        <property type="entry name" value="FlgH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000527">
        <property type="entry name" value="Flag_Lring"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34933">
        <property type="entry name" value="PTHR34933"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02107">
        <property type="entry name" value="FlgH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01008">
        <property type="entry name" value="FLGLRINGFLGH"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6" id="KW-0975">Bacterial flagellum</keyword>
    <keyword evidence="5 6" id="KW-0998">Cell outer membrane</keyword>
    <keyword evidence="6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="7">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5008846627" description="Flagellar L-ring protein" evidence="7">
        <location>
            <begin position="20"/>
            <end position="249"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002591"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023143"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023237"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00415"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ68221.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="249" mass="26300" checksum="3146D441FB16B3D3" modified="2015-12-09" version="1">MSISRNISLLGSIALAALAAGCGSADRLANVGQQPALNAIQDPTTTPGYRPVQMPMPDPVQAHYNPNSLWQSGSRAFFKDQRASQVGDILTVVVSIDEKAEIENDTARSRTETNGAGVGGALGTAIDTIFLPAGTSASDLGNVNSSSTFAGAGEVDREEELRTTVAAVVTQVLPNGNLVIEGRQEIRVNFEVRELIVAGIVRPEDITSNNTIASQQIAEARIGYGGRGQITDVQQPRYGNQVLDILLPF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1D9</accession>
    <name>A0A0M7A1D9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 6">30S ribosomal protein S14</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6 7" type="primary">rpsN</name>
        <name evidence="7" type="ORF">LAX5112_01739</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 6">Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Part of the 30S ribosomal subunit. Contacts proteins S3 and S10.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the universal ribosomal protein uS14 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68437.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008189926.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01739"/>
    <dbReference type="EnsemblBacteria" id="CTQ68437">
        <property type="protein sequence ID" value="CTQ68437"/>
        <property type="gene ID" value="LAX5112_01739"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00537">
        <property type="entry name" value="Ribosomal_S14_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001209">
        <property type="entry name" value="Ribosomal_S14"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023036">
        <property type="entry name" value="Ribosomal_S14_bac/plastid"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018271">
        <property type="entry name" value="Ribosomal_S14_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19836">
        <property type="entry name" value="PTHR19836"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00253">
        <property type="entry name" value="Ribosomal_S14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00527">
        <property type="entry name" value="RIBOSOMAL_S14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 6" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="4 6" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="6" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="6" id="KW-0699">rRNA-binding</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003686"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009083"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00015704"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00537"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ68437.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="101" mass="11569" checksum="96F3B704777FD545" modified="2015-12-09" version="1">MAKKSAVEKNKRREKLVKKYAEKRAALKAMAKDDTLSPEEQFNARLKLAKLPRNSAPNRVRNRCEVSGRPRGYYRKLKMSRIALRELGSLGKIPGLVKSSW</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1P7</accession>
    <name>A0A0M7A1P7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Putative N-methylproline demethylase</fullName>
            <ecNumber evidence="4">1.-.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">stcD</name>
        <name evidence="4" type="ORF">LAX5112_01933</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">In the N-terminal section; belongs to the NADH:flavin oxidoreductase/NADH oxidase family.</text>
    </comment>
    <dbReference type="EC" id="1.-.-.-" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68915.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671624.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01933"/>
    <dbReference type="EnsemblBacteria" id="CTQ68915">
        <property type="protein sequence ID" value="CTQ68915"/>
        <property type="gene ID" value="LAX5112_01933"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010181">
        <property type="term" value="F:FMN binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023753">
        <property type="entry name" value="FAD/NAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001155">
        <property type="entry name" value="OxRdtase_FMN_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00724">
        <property type="entry name" value="Oxidored_FMN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07992">
        <property type="entry name" value="Pyr_redox_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="4" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Oxidored_FMN" evidence="2">
        <location>
            <begin position="6"/>
            <end position="340"/>
        </location>
    </feature>
    <feature type="domain" description="Pyr_redox_2" evidence="3">
        <location>
            <begin position="386"/>
            <end position="622"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00011048"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00724"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF07992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ68915.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="678" mass="74588" checksum="3710DCF1D1117826" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1T0</accession>
    <name>A0A0M7A1T0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Flagellin</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">flaA_4</name>
        <name evidence="6" type="ORF">LAX5112_01690</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Secreted</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="3">Bacterial flagellum</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the bacterial flagellin family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68250.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671440.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01690"/>
    <dbReference type="EnsemblBacteria" id="CTQ68250">
        <property type="protein sequence ID" value="CTQ68250"/>
        <property type="gene ID" value="LAX5112_01690"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009288">
        <property type="term" value="C:bacterial-type flagellum"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005198">
        <property type="term" value="F:structural molecule activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001492">
        <property type="entry name" value="Flagellin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046358">
        <property type="entry name" value="Flagellin_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001029">
        <property type="entry name" value="Flagellin_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42792">
        <property type="entry name" value="PTHR42792"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00700">
        <property type="entry name" value="Flagellin_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00669">
        <property type="entry name" value="Flagellin_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3" id="KW-0975">Bacterial flagellum</keyword>
    <keyword evidence="6" id="KW-0966">Cell projection</keyword>
    <keyword evidence="6" id="KW-0969">Cilium</keyword>
    <keyword evidence="6" id="KW-0282">Flagellum</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0964">Secreted</keyword>
    <feature type="domain" description="Flagellin_N" evidence="4">
        <location>
            <begin position="12"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="domain" description="Flagellin_C" evidence="5">
        <location>
            <begin position="427"/>
            <end position="507"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005709"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023143"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU362073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00669"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00700"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ68250.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="507" mass="52990" checksum="DA66E268A7B5AABF" modified="2015-12-09" version="1">MSGITLSAAVRQNLLTLQNTSFLTADVQNKLATGLKVNSALDNPNSFFTASALSSRANDLRGLLDDMGQSVNTIKAADDGITAITKLVESAKAKANQALQTGSQYERKQFAAQYNELLEQIEDTARDSSYKGKNLLAGDGNDLRTIFNEDSTSRLDISAIDYTDTSLSNGLNLTDIAEGTGGGTGFNLSGGKTTITLAGADGALNSNSVLSELTALPSTTSTITFADQTVPTAGASLGTVSQTATVQELVDGLNAQEGVRAEFDETNGELTIYSNETFALTNGTSASSSANLTFGTVAALATGTDFTAGSTLVDSGSFAIGDTITLTDGNNYELGSLEIEADTTVDDLTNFINDFNGLSATFINGRVGFTSETDLTINSKRNGSDNTDFAAQSFTGTTGGNFSIATDDDSGFATDSEINRVITRLNNSLGNLRTQASEFGTNLSIVENRQDFTRAIVNTLQEGAGKLTLADTNEEGANLLALQTRQQLASTSLSFASQADQTVLSLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A272</accession>
    <name>A0A0M7A272_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Histidine transport system permease protein HisQ</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">hisQ</name>
        <name evidence="8" type="ORF">LAX5112_01942</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="6">Cell membrane</location>
            <topology evidence="6">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68939.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671629.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01942"/>
    <dbReference type="EnsemblBacteria" id="CTQ68939">
        <property type="protein sequence ID" value="CTQ68939"/>
        <property type="gene ID" value="LAX5112_01942"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071705">
        <property type="term" value="P:nitrogen compound transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010065">
        <property type="entry name" value="AA_ABC_transptr_permease_3TM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01726">
        <property type="entry name" value="HEQRo_perm_3TM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="20"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="68"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="106"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="151"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="202"/>
            <end position="224"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="7">
        <location>
            <begin position="23"/>
            <end position="220"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ68939.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="237" mass="25828" checksum="B08B355A72BB6E06" modified="2015-12-09" version="1">MNEALTLLSFGEQGWGDTIASGVLITVSLALATLPIGLILGFLIALAKKSSEPSLKLAANIYTTIFRGLPELLTLFLVYFGVQIAIQEFIKLLGYDIYFEVNSFVAGMVALSLVFSSYASEAFLSAFNGIPQGQYEGGYALGLSRYKTMRLIILPQLIRLALPALGNLWLILLKETSLVSVIGLADLVREAGIAARVTKEPFLFFGLVLVIYLLLTMISSVGLLRIERWSKRGDAAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2Q0</accession>
    <name>A0A0M7A2Q0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_01850</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68696.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671557.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01850"/>
    <dbReference type="EnsemblBacteria" id="CTQ68696">
        <property type="protein sequence ID" value="CTQ68696"/>
        <property type="gene ID" value="LAX5112_01850"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ68696.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="220" mass="24321" checksum="72579502771E40D7" modified="2015-12-09" version="1">MPEPTPVLPEVLAQIQSLPASDRPLIICDVDEVILHMILHLEEYLNNKGMHFLNHSYRLTGNIARTEDGAPVPADQVKRHLITFFDEVSHEQAMVPDANTALAELTDQWDIVLLTNLPGSHNKPVRETLLRGMGIPYPVLTNSGPKGGAVAVLAGGRAHPVVFIDDSPTNHRSVQASLPASVQIQFIADQRFLNSVEPEPHIDLLSGDWRETSRFIRSIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="36" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2R1</accession>
    <name>A0A0M7A2R1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 13">DNA polymerase I</fullName>
            <ecNumber evidence="3 13">2.7.7.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13 18" type="primary">polA</name>
        <name evidence="18" type="ORF">LAX5112_02005</name>
    </gene>
    <organism evidence="18 19">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="19" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="19">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="13">In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="12 13">
            <text>a 2'-deoxyribonucleoside 5'-triphosphate + DNA(n) = diphosphate + DNA(n+1)</text>
            <dbReference type="Rhea" id="RHEA:22508"/>
            <dbReference type="Rhea" id="RHEA-COMP:17339"/>
            <dbReference type="Rhea" id="RHEA-COMP:17340"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:61560"/>
            <dbReference type="ChEBI" id="CHEBI:173112"/>
            <dbReference type="EC" id="2.7.7.7"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="2">Single-chain monomer with multiple functions.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 13">Belongs to the DNA polymerase type-A family.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.7" evidence="3 13"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69159.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02005"/>
    <dbReference type="EnsemblBacteria" id="CTQ69159">
        <property type="protein sequence ID" value="CTQ69159"/>
        <property type="gene ID" value="LAX5112_02005"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008408">
        <property type="term" value="F:3'-5' exonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003887">
        <property type="term" value="F:DNA-directed DNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006261">
        <property type="term" value="P:DNA-templated DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd09898">
        <property type="entry name" value="H3TH_53EXO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002562">
        <property type="entry name" value="3'-5'_exonuclease_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020046">
        <property type="entry name" value="5-3_exonucl_a-hlix_arch_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002421">
        <property type="entry name" value="5-3_exonuclease"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036279">
        <property type="entry name" value="5-3_exonuclease_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019760">
        <property type="entry name" value="DNA-dir_DNA_pol_A_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001098">
        <property type="entry name" value="DNA-dir_DNA_pol_A_palm_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043502">
        <property type="entry name" value="DNA/RNA_pol_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020045">
        <property type="entry name" value="DNA_polI_H3TH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018320">
        <property type="entry name" value="DNA_polymerase_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002298">
        <property type="entry name" value="DNA_polymerase_A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008918">
        <property type="entry name" value="HhH2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029060">
        <property type="entry name" value="PIN-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10133">
        <property type="entry name" value="PTHR10133"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01367">
        <property type="entry name" value="5_3_exonuc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02739">
        <property type="entry name" value="5_3_exonuc_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00476">
        <property type="entry name" value="DNA_pol_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01612">
        <property type="entry name" value="DNA_pol_A_exo1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00868">
        <property type="entry name" value="DNAPOLI"/>
    </dbReference>
    <dbReference type="SMART" id="SM00474">
        <property type="entry name" value="35EXOc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00475">
        <property type="entry name" value="53EXOc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00279">
        <property type="entry name" value="HhH2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00482">
        <property type="entry name" value="POLAc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47807">
        <property type="entry name" value="SSF47807"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56672">
        <property type="entry name" value="SSF56672"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88723">
        <property type="entry name" value="SSF88723"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00593">
        <property type="entry name" value="pola"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00447">
        <property type="entry name" value="DNA_POLYMERASE_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="13" id="KW-0227">DNA damage</keyword>
    <keyword evidence="13" id="KW-0234">DNA repair</keyword>
    <keyword evidence="13" id="KW-0235">DNA replication</keyword>
    <keyword evidence="11 13" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="10 13" id="KW-0239">DNA-directed DNA polymerase</keyword>
    <keyword evidence="9" id="KW-0269">Exonuclease</keyword>
    <keyword evidence="8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-0540">Nuclease</keyword>
    <keyword evidence="6 13 18" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="19" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 13 18" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="53EXOc" evidence="16">
        <location>
            <begin position="14"/>
            <end position="277"/>
        </location>
    </feature>
    <feature type="domain" description="3'-5' exonuclease" evidence="15">
        <location>
            <begin position="379"/>
            <end position="574"/>
        </location>
    </feature>
    <feature type="domain" description="POLAc" evidence="17">
        <location>
            <begin position="743"/>
            <end position="949"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="14">
        <location>
            <begin position="332"/>
            <end position="351"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011541"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00020311"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022839"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00024632"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU004460"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="SMART" id="SM00474"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="SMART" id="SM00475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="SMART" id="SM00482"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="EMBL" id="CTQ69159.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="989" mass="107920" checksum="F6CC60FCB0B54356" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2U4</accession>
    <name>A0A0M7A2U4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Putative acyl-CoA dehydrogenase AidB</fullName>
            <ecNumber evidence="9">1.3.99.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">aidB_1</name>
        <name evidence="9" type="ORF">LAX5112_01867</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 5">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the acyl-CoA dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.3.99.-" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68736.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01867"/>
    <dbReference type="EnsemblBacteria" id="CTQ68736">
        <property type="protein sequence ID" value="CTQ68736"/>
        <property type="gene ID" value="LAX5112_01867"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003995">
        <property type="term" value="F:acyl-CoA dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006089">
        <property type="entry name" value="Acyl-CoA_DH_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006091">
        <property type="entry name" value="Acyl-CoA_Oxase/DH_mid-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036250">
        <property type="entry name" value="AcylCo_DH-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009075">
        <property type="entry name" value="AcylCo_DH/oxidase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009100">
        <property type="entry name" value="AcylCoA_DH/oxidase_NM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041504">
        <property type="entry name" value="AidB_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00441">
        <property type="entry name" value="Acyl-CoA_dh_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02770">
        <property type="entry name" value="Acyl-CoA_dh_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18158">
        <property type="entry name" value="AidB_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47203">
        <property type="entry name" value="SSF47203"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56645">
        <property type="entry name" value="SSF56645"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00073">
        <property type="entry name" value="ACYL_COA_DH_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0274">FAD</keyword>
    <keyword evidence="3 5" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="5 9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AidB_N" evidence="8">
        <location>
            <begin position="27"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="domain" description="Acyl-CoA_dh_M" evidence="7">
        <location>
            <begin position="195"/>
            <end position="288"/>
        </location>
    </feature>
    <feature type="domain" description="Acyl-CoA_dh_1" evidence="6">
        <location>
            <begin position="299"/>
            <end position="454"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009347"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU362125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00441"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF02770"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF18158"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ68736.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="559" mass="59263" checksum="189030FC57990FD3" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3R2</accession>
    <name>A0A0M7A3R2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01991</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69122.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671899.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ69122">
        <property type="protein sequence ID" value="CTQ69122"/>
        <property type="gene ID" value="LAX5112_01991"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="55"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="102"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="131"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="183"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="217"/>
            <end position="244"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69122.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="257" mass="27812" checksum="E16AD1BCF76AD046" modified="2015-12-09" version="1">MLKRLLSDAASLVFGHLETVFKVCGAWFLIQFVISILILTATAGVPADAETLPPAAGLLLMTSTLVALISSASISVAWHRYGLLGERVGNIYLRFGRIEIQFIWRMLLIGLFGFAVSLPLVFVAFMPSESASGLAIIALVLGFALVIMPFLMRLNLVLPATAIERPIGFGEALRIGKGLGWRMLLAIMVLSLPFVLVTMGLQWALTVVSIGLPALFIQIKVMILNVLLQIIVTVLGISVITAGYRMAMERQTQSAES</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4B8</accession>
    <name>A0A0M7A4B8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Group 3 truncated hemoglobin ctb</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">ctb</name>
        <name evidence="1" type="ORF">LAX5112_02294</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ69945.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008194499.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ69945">
        <property type="protein sequence ID" value="CTQ69945"/>
        <property type="gene ID" value="LAX5112_02294"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019825">
        <property type="term" value="F:oxygen binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.490.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009050">
        <property type="entry name" value="Globin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012292">
        <property type="entry name" value="Globin/Proto"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46458">
        <property type="entry name" value="SSF46458"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ69945.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="157" mass="17846" checksum="B9239336A4C4164C" modified="2015-12-09" version="1">MQIKQSLLKTSGAVFRSDGACGVQYAEVTPETIRILVHSFYETLRQQPHLGEIFEKRLGGRWPEHLEKMERFWQSVLLKNGTYKGKPVPEHLKLKEVVSSDYGDWLDVFRPVAREIFVPDVAEEIIAIAERIAQSLWLATFGFAGSTPPAELFTEQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4N9</accession>
    <name>A0A0M7A4N9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Glutathione hydrolase proenzyme</fullName>
            <ecNumber evidence="4">2.3.2.2</ecNumber>
            <ecNumber evidence="4">3.4.19.13</ecNumber>
        </recommendedName>
        <component>
            <recommendedName>
                <fullName evidence="4">Glutathione hydrolase large chain</fullName>
            </recommendedName>
        </component>
        <component>
            <recommendedName>
                <fullName evidence="4">Glutathione hydrolase small chain</fullName>
            </recommendedName>
        </component>
    </protein>
    <gene>
        <name evidence="6" type="primary">ggt_2</name>
        <name evidence="6" type="ORF">LAX5112_02035</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="2 4">
            <text>an S-substituted glutathione + H2O = an S-substituted L-cysteinylglycine + L-glutamate</text>
            <dbReference type="Rhea" id="RHEA:59468"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:90779"/>
            <dbReference type="ChEBI" id="CHEBI:143103"/>
            <dbReference type="EC" id="3.4.19.13"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 4">
            <text>an alpha-amino acid + an N-terminal (5-L-glutamyl)-[peptide] = 5-L-glutamyl amino acid + N-terminal L-alpha-aminoacyl-[peptide]</text>
            <dbReference type="Rhea" id="RHEA:23904"/>
            <dbReference type="Rhea" id="RHEA-COMP:9780"/>
            <dbReference type="Rhea" id="RHEA-COMP:9795"/>
            <dbReference type="ChEBI" id="CHEBI:77644"/>
            <dbReference type="ChEBI" id="CHEBI:78597"/>
            <dbReference type="ChEBI" id="CHEBI:78599"/>
            <dbReference type="ChEBI" id="CHEBI:78608"/>
            <dbReference type="EC" id="2.3.2.2"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3 4">
            <text>glutathione + H2O = L-cysteinylglycine + L-glutamate</text>
            <dbReference type="Rhea" id="RHEA:28807"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:57925"/>
            <dbReference type="ChEBI" id="CHEBI:61694"/>
            <dbReference type="EC" id="3.4.19.13"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="4">Sulfur metabolism; glutathione metabolism.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">This enzyme consists of two polypeptide chains, which are synthesized in precursor form from a single polypeptide.</text>
    </comment>
    <comment type="PTM">
        <text evidence="4">Cleaved by autocatalysis into a large and a small subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the gamma-glutamyltransferase family.</text>
    </comment>
    <dbReference type="EC" id="2.3.2.2" evidence="4"/>
    <dbReference type="EC" id="3.4.19.13" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69230.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671721.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02035"/>
    <dbReference type="EnsemblBacteria" id="CTQ69230">
        <property type="protein sequence ID" value="CTQ69230"/>
        <property type="gene ID" value="LAX5112_02035"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00204"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0036374">
        <property type="term" value="F:glutathione hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102953">
        <property type="term" value="F:hypoglycin A gamma-glutamyl transpeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0103068">
        <property type="term" value="F:leukotriene C4 gamma-glutamyl transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006750">
        <property type="term" value="P:glutathione biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006751">
        <property type="term" value="P:glutathione catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.246.130">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.20.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043138">
        <property type="entry name" value="GGT_lsub_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000101">
        <property type="entry name" value="GGT_peptidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043137">
        <property type="entry name" value="GGT_ssub"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029055">
        <property type="entry name" value="Ntn_hydrolases_N"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56235">
        <property type="entry name" value="SSF56235"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00066">
        <property type="entry name" value="g_glut_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00462">
        <property type="entry name" value="G_GLU_TRANSPEPTIDASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="4" id="KW-0317">Glutathione biosynthesis</keyword>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0732">Signal</keyword>
    <keyword evidence="4 6" id="KW-0808">Transferase</keyword>
    <keyword evidence="4" id="KW-0865">Zymogen</keyword>
    <feature type="signal peptide" evidence="5">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809089" description="Glutathione hydrolase proenzyme" evidence="5">
        <location>
            <begin position="26"/>
            <end position="582"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000250"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00001089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU368036"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ69230.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="582" mass="60568" checksum="B112882A40621945" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6H7</accession>
    <name>A0A0M7A6H7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02078</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69343.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ69343">
        <property type="protein sequence ID" value="CTQ69343"/>
        <property type="gene ID" value="LAX5112_02078"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ69343.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="67" mass="7216" checksum="7F794C6E1BADFD73" modified="2015-12-09" version="1">MSVIGFGIGAKRNVIDSFPQSGDDFFVKHLHIEAVATALGERNGFSLACNSLHRILGALFRSPSGWV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6Y4</accession>
    <name>A0A0M7A6Y4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">3-methyl-adenine DNA glycosylase I</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02399</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70186.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672016.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02399"/>
    <dbReference type="EnsemblBacteria" id="CTQ70186">
        <property type="protein sequence ID" value="CTQ70186"/>
        <property type="gene ID" value="LAX5112_02399"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008725">
        <property type="term" value="F:DNA-3-methyladenine glycosylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006284">
        <property type="term" value="P:base-excision repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005019">
        <property type="entry name" value="Adenine_glyco"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011257">
        <property type="entry name" value="DNA_glycosylase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03352">
        <property type="entry name" value="Adenine_glyco"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48150">
        <property type="entry name" value="SSF48150"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ70186.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="225" mass="25096" checksum="8DDED38062589DBB" modified="2015-12-09" version="1">MKSFEDIETLAIEKKGGADQLSALMAEHNGPKTPVELETIGDDRWLSMFTKTIFQAGFSWKVIEKKWPGFEEAFEGFDTARLAFLPDEAFEALLNNKAIVRNAMKIKSVQANAIFLRDLAEAHGSASKFFAQYPVEDQIGLMDVLKKRGSRLGGNSGQYALRLMGKETFILSRDVVNALIRENVIGNESMSKKNLTAIQEAFNHWRSTSGRSLNEISRILAFSVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7N4</accession>
    <name>A0A0M7A7N4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Putative 2-ketoarginine decarboxylase AruI</fullName>
            <ecNumber evidence="6">4.1.1.75</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">aruI</name>
        <name evidence="6" type="ORF">LAX5112_02555</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the TPP enzyme family.</text>
    </comment>
    <dbReference type="EC" id="4.1.1.75" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70631.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672155.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02555"/>
    <dbReference type="EnsemblBacteria" id="CTQ70631">
        <property type="protein sequence ID" value="CTQ70631"/>
        <property type="gene ID" value="LAX5112_02555"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047435">
        <property type="term" value="F:5-guanidino-2-oxopentanoate decarboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030976">
        <property type="term" value="F:thiamine pyrophosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044281">
        <property type="term" value="P:small molecule metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029035">
        <property type="entry name" value="DHS-like_NAD/FAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029061">
        <property type="entry name" value="THDP-binding"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012000">
        <property type="entry name" value="Thiamin_PyroP_enz_cen_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012001">
        <property type="entry name" value="Thiamin_PyroP_enz_TPP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000399">
        <property type="entry name" value="TPP-bd_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045229">
        <property type="entry name" value="TPP_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011766">
        <property type="entry name" value="TPP_enzyme-bd_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18968">
        <property type="entry name" value="PTHR18968"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02775">
        <property type="entry name" value="TPP_enzyme_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00205">
        <property type="entry name" value="TPP_enzyme_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02776">
        <property type="entry name" value="TPP_enzyme_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52467">
        <property type="entry name" value="SSF52467"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52518">
        <property type="entry name" value="SSF52518"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00187">
        <property type="entry name" value="TPP_ENZYMES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0456">Lyase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0786">Thiamine pyrophosphate</keyword>
    <feature type="domain" description="TPP_enzyme_N" evidence="5">
        <location>
            <begin position="7"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="domain" description="TPP_enzyme_M" evidence="3">
        <location>
            <begin position="201"/>
            <end position="325"/>
        </location>
    </feature>
    <feature type="domain" description="TPP_enzyme_C" evidence="4">
        <location>
            <begin position="390"/>
            <end position="527"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007812"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU362132"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00205"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF02775"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF02776"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ70631.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="537" mass="56268" checksum="EC4C4C31611F928C" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A816</accession>
    <name>A0A0M7A816_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Carboxymethylenebutenolidase</fullName>
            <ecNumber evidence="2">3.1.1.45</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">clcD</name>
        <name evidence="2" type="ORF">LAX5112_02488</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.1.45" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70380.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672074.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02488"/>
    <dbReference type="EnsemblBacteria" id="CTQ70380">
        <property type="protein sequence ID" value="CTQ70380"/>
        <property type="gene ID" value="LAX5112_02488"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008806">
        <property type="term" value="F:carboxymethylenebutenolidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002925">
        <property type="entry name" value="Dienelactn_hydro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006311">
        <property type="entry name" value="TAT_signal"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01738">
        <property type="entry name" value="DLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DLH" evidence="1">
        <location>
            <begin position="91"/>
            <end position="299"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70380.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="301" mass="32834" checksum="D45793C70F5D8AA6" modified="2015-12-09" version="1">MNEMTPVRRMTAKDFPQELLDLYDYYAHGKITKREFLTGAAKFAVAGVTAAMLLDQLSPNYALAQQVAPDDAAIETDRITYPSPNGHGEVNAYMVKPAGATGKLAAVLVIHENRGLNPYIEDVARRLGKAGFLALAPDGLTSVGGYPGNDDEGRQLQRTVDREKLLNDFFAGFEFLLNHEDSTGKVGAVGFCYGGGVVNAIAVAYPELSAGVPFYGRQPAVEDVAKIEAPLMLQHAELDERINAGWPAYEEALKAHGKEYVAHMYQGANHGFHNDTTPRFDAEAAELAEERTVAFFKEHLM</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8G1</accession>
    <name>A0A0M7A8G1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 8">Phosphate transport system permease protein PstA</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">pstA</name>
        <name evidence="11" type="ORF">LAX5112_02538</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 8">Cell inner membrane</location>
            <topology evidence="2 8">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 8">Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70520.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008195675.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02538"/>
    <dbReference type="EnsemblBacteria" id="CTQ70520">
        <property type="protein sequence ID" value="CTQ70520"/>
        <property type="gene ID" value="LAX5112_02538"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005315">
        <property type="term" value="F:inorganic phosphate transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035435">
        <property type="term" value="P:phosphate ion transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024573">
        <property type="entry name" value="DUF3333"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005672">
        <property type="entry name" value="Phosphate_PstA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11812">
        <property type="entry name" value="DUF3333"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00974">
        <property type="entry name" value="3a0107s02c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="41"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="230"/>
            <end position="251"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="271"/>
            <end position="291"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="297"/>
            <end position="315"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="347"/>
            <end position="368"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="420"/>
            <end position="441"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="10">
        <location>
            <begin position="226"/>
            <end position="438"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007069"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00016864"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU363043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ70520.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="449" mass="48779" checksum="092BDB87B35385B3" modified="2015-12-09" version="1">MTDATLSPDGAKAPEKTTTQPRSLYATDDLTKKRNASEKRFQAYGITAILIGLVFLVVMAYSIISEGIPAFTRTVLTVEFTVTQEQFDDAESQLFKTRAYEAVFTEAMSSQFQQKNIQVPFDIAAIERIVGKPGSTIREFYRANPDQLGQPVVFELAASSRVDGYMNGRLTRDNITDSRFLMKSDLDLVDVLVESGIIETVFNWPFITGADSGVDNPGGAGIGASVVGSFFMMLVVLFLSLPIGVAASIYLEEFAPQNRITDLIEVNISNLAAVPSIVFGILGLAVFIQFMHLPQSAPIVGGLVLTLMTLPTIIISTRASLKAVPPSIRDAALGVGASKMQSVFHHVLPLAMPGILTGTIIGLAQALGETAPLLLIGMVGFVARGYPDGFVSGFMDPNSAMPAQIYTWAARSDFAFYEKAWGGIIVLLVFLLTMNIIAIILRRRFERRW</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9D8</accession>
    <name>A0A0M7A9D8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Methyl-accepting chemotaxis protein 4</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">mcp4_11</name>
        <name evidence="8" type="ORF">LAX5112_02626</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the methyl-accepting chemotaxis (MCP) protein family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70840.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70840">
        <property type="protein sequence ID" value="CTQ70840"/>
        <property type="gene ID" value="LAX5112_02626"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004089">
        <property type="entry name" value="MCPsignal_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013587">
        <property type="entry name" value="Nitrate/nitrite_sensing"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000727">
        <property type="entry name" value="T_SNARE_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00015">
        <property type="entry name" value="MCPsignal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08376">
        <property type="entry name" value="NIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00283">
        <property type="entry name" value="MA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50111">
        <property type="entry name" value="CHEMOTAXIS_TRANSDUC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50192">
        <property type="entry name" value="T_SNARE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 3" id="KW-0807">Transducer</keyword>
    <feature type="domain" description="HAMP" evidence="7">
        <location>
            <begin position="333"/>
            <end position="386"/>
        </location>
    </feature>
    <feature type="domain" description="Methyl-accepting transducer" evidence="5">
        <location>
            <begin position="426"/>
            <end position="662"/>
        </location>
    </feature>
    <feature type="domain" description="T-SNARE coiled-coil homology" evidence="6">
        <location>
            <begin position="578"/>
            <end position="640"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="4">
        <location>
            <begin position="402"/>
            <end position="429"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023224"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00029447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ70840.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="686" mass="73529" checksum="41B39675BF77370C" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AA51</accession>
    <name>A0A0M7AA51_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Ribosomal-protein-alanine N-acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02788</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71342.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008197255.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02788"/>
    <dbReference type="EnsemblBacteria" id="CTQ71342">
        <property type="protein sequence ID" value="CTQ71342"/>
        <property type="gene ID" value="LAX5112_02788"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006474">
        <property type="term" value="P:N-terminal protein amino acid acetylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006464">
        <property type="entry name" value="AcTrfase_RimI/Ard1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01575">
        <property type="entry name" value="rimI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="11"/>
            <end position="162"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ71342.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="162" mass="18093" checksum="B44C6C9A660C1D91" modified="2015-12-09" version="1">MSFWWFWSQPPVIEEALDEDLLKVAEIHAASFKHAWDVEELARMKAQSGTSILVARRASPYGTQGPLGFLILRTAADEAEVITIAVHPRQRGRGIGKKLMEDGLFRLYGERCKSLFLEVDSSNEAAILLYRSLGFREVGRRKGYYSDSGGDGTALVMRVDLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AA75</accession>
    <name>A0A0M7AA75_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Phosphate import ATP-binding protein PstB</fullName>
            <ecNumber evidence="7">3.6.3.27</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">pstB</name>
        <name evidence="7" type="ORF">LAX5112_02539</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.27" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70524.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008197381.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02539"/>
    <dbReference type="EnsemblBacteria" id="CTQ70524">
        <property type="protein sequence ID" value="CTQ70524"/>
        <property type="gene ID" value="LAX5112_02539"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015415">
        <property type="term" value="F:ATPase-coupled phosphate ion transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005315">
        <property type="term" value="F:inorganic phosphate transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03260">
        <property type="entry name" value="ABC_PstB_phosphate_transporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015850">
        <property type="entry name" value="ABC_transpr_PstB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005670">
        <property type="entry name" value="Phosp_transpt1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43423">
        <property type="entry name" value="PTHR43423"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43423:SF3">
        <property type="entry name" value="PTHR43423:SF3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00972">
        <property type="entry name" value="3a0107s01c2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5 7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3 5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="2" id="KW-0592">Phosphate transport</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ABC transporter" evidence="6">
        <location>
            <begin position="18"/>
            <end position="260"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="50"/>
            <end position="57"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022592"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ70524.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="265" mass="29400" checksum="1F12A8B9662A9033" modified="2015-12-09" version="1">MNDMPKIEQATDMTDSKISANKVQVYYGDTHAIKDVDIEIQPRSVTAFIGPSGCGKSTFLRTINRMNDTIDICRVEGSIKIDGEDIYDPKVDPVQLRAKVGMVFQKPNPFPKSIYDNVAYGPRIHGLARNRAELDDIVASSLQKAGLWEEAKDRLDEPGTGMSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRENYTIVIVTHSMQQAARVSQRTAFFHLGILVEEGPTQDIFTNPVDKRTQDYITGRFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAD9</accession>
    <name>A0A0M7AAD9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Inner membrane ABC transporter permease protein YejE</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">yejE</name>
        <name evidence="7" type="ORF">LAX5112_02820</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71432.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008190399.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02820"/>
    <dbReference type="EnsemblBacteria" id="CTQ71432">
        <property type="protein sequence ID" value="CTQ71432"/>
        <property type="gene ID" value="LAX5112_02820"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="50"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="196"/>
            <end position="220"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="240"/>
            <end position="273"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="358"/>
            <end position="383"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="192"/>
            <end position="384"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ71432.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="394" mass="43979" checksum="31E5D61A3EC2F24D" modified="2015-12-09" version="1">MDSRLNKDLENAGYDVLNPLAEETAPPPKKMRLSPINQRRLANFKANRRGYWSLWIFLVLFVLAMGAEFVTNDRPILVSYNGELLAPVFVDYPEEKFGGFLAITDYRDPFIQEEIEANGWMLWPAVRYSYRTVNHEIPVPAPAPPSWMLDKQERCQRYPLGADDPNCVMGNWNWLGTDDQGRDVLARLVYGFRISVLFGLALTLASSVIGIAAGAVQGYYGGWVDLIFQRFIEIWTAIPTLYLILIVSSVLIPGFWTLFTILLAFSWVALVGVVRAEFLRGRNFEYISAARALGVSNGVIMWRHLLPNAMVATLTFMPFILNGSISTLTALDFLGFGLPPGSASLGELLAQGKNNLQAPWLGITGFMVISLMLSLLIFIGEAVRDAFDPRKSLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAU5</accession>
    <name>A0A0M7AAU5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Trifunctional nucleotide phosphoesterase protein YfkN</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">yfkN_2</name>
        <name evidence="10" type="ORF">LAX5112_02627</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>a nucleoside 2',3'-cyclic phosphate + H2O = a nucleoside 3'-phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:19621"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:66949"/>
            <dbReference type="ChEBI" id="CHEBI:66954"/>
            <dbReference type="EC" id="3.1.4.16"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>a ribonucleoside 3'-phosphate + H2O = a ribonucleoside + phosphate</text>
            <dbReference type="Rhea" id="RHEA:10144"/>
            <dbReference type="ChEBI" id="CHEBI:13197"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:18254"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="EC" id="3.1.3.6"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="3">
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="4 7">Belongs to the 5'-nucleotidase family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70843.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672204.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02627"/>
    <dbReference type="EnsemblBacteria" id="CTQ70843">
        <property type="protein sequence ID" value="CTQ70843"/>
        <property type="gene ID" value="LAX5112_02627"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0110165">
        <property type="term" value="C:cellular anatomical entity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008663">
        <property type="term" value="F:2',3'-cyclic-nucleotide 2'-phosphodiesterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008254">
        <property type="term" value="F:3'-nucleotidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009166">
        <property type="term" value="P:nucleotide catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07410">
        <property type="entry name" value="MPP_CpdB_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.21.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.780.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008334">
        <property type="entry name" value="5'-Nucleotdase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036907">
        <property type="entry name" value="5'-Nucleotdase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006146">
        <property type="entry name" value="5'-Nucleotdase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006179">
        <property type="entry name" value="5_nucleotidase/apyrase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004843">
        <property type="entry name" value="Calcineurin-like_PHP_ApaH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041827">
        <property type="entry name" value="CpdB_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029052">
        <property type="entry name" value="Metallo-depent_PP-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006311">
        <property type="entry name" value="TAT_signal"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11575">
        <property type="entry name" value="PTHR11575"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02872">
        <property type="entry name" value="5_nucleotid_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00149">
        <property type="entry name" value="Metallophos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01607">
        <property type="entry name" value="APYRASEFAMLY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55816">
        <property type="entry name" value="SSF55816"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56300">
        <property type="entry name" value="SSF56300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00786">
        <property type="entry name" value="5_NUCLEOTIDASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0511">Multifunctional enzyme</keyword>
    <keyword evidence="7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Metallophos" evidence="8">
        <location>
            <begin position="42"/>
            <end position="283"/>
        </location>
    </feature>
    <feature type="domain" description="5_nucleotid_C" evidence="9">
        <location>
            <begin position="381"/>
            <end position="577"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00001968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00006654"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023268"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU362119"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00149"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF02872"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ70843.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="659" mass="71209" checksum="2E5488E486A59C48" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABE5</accession>
    <name>A0A0M7ABE5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Cell division protein ZapA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03181</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72438.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451023.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03181"/>
    <dbReference type="EnsemblBacteria" id="CTQ72438">
        <property type="protein sequence ID" value="CTQ72438"/>
        <property type="gene ID" value="LAX5112_03181"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007838">
        <property type="entry name" value="Cell_div_ZapA-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036192">
        <property type="entry name" value="Cell_div_ZapA-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042233">
        <property type="entry name" value="Cell_div_ZapA_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34981">
        <property type="entry name" value="PTHR34981"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05164">
        <property type="entry name" value="ZapA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF102829">
        <property type="entry name" value="SSF102829"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="2" id="KW-0132">Cell division</keyword>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="56"/>
            <end position="90"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72438.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="125" mass="13616" checksum="CF8613D01F21848A" modified="2015-12-09" version="1">MAQISVTINGKSFRMACDDGEEQRLEGLAARFDGWIGELKSAFGEIGDQRLTVMAGIMATDQLSELERKVTRLEQELAVAKDQQVAALNNMSQNEQDLSRAVNTAAARIESLADGLTKSLRTAND</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABK9</accession>
    <name>A0A0M7ABK9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">DNA-binding transcriptional activator GcvA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02875</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71590.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672392.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02875"/>
    <dbReference type="EnsemblBacteria" id="CTQ71590">
        <property type="protein sequence ID" value="CTQ71590"/>
        <property type="gene ID" value="LAX5112_02875"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ71590.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="293" mass="32852" checksum="3E196137D1BFB311" modified="2015-12-09" version="1">MQHWSEIRTAARVARLGTVSAAAESLGVHRATINRHVDTLEAAIGGKLFQRHAKGFTPTDLGRELLRIADTADEQFEELHRKAQGQGDALRGDFIVTSIATYAPTLMLILRAFGDKHPGLTIRFMVSDSLLRLEYGEAHVAFRAGGRPENPDNVVREFERIEIGLFAHQIYIDRYGLPDGINDFPKHRFAGTVDPNTRAGFQRWLHENVPAECITFRSNSMGTLAQAVLCGNGIGFLPREAALERGDLVEIVPPDPDWLSMMWMVTHVDLHRSAKVQAFLKELEHLRRTGDWL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ABP2</accession>
    <name>A0A0M7ABP2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Geranylgeranyl diphosphate reductase</fullName>
            <ecNumber evidence="3">1.3.1.83</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">Geranylgeranyl reductase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="10" type="primary">cbrA</name>
        <name evidence="10" type="ORF">LAX5112_02939</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>3 NADP(+) + phytyl diphosphate = geranylgeranyl diphosphate + 3 H(+) + 3 NADPH</text>
            <dbReference type="Rhea" id="RHEA:26229"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57533"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="ChEBI" id="CHEBI:75434"/>
            <dbReference type="EC" id="1.3.1.83"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="7">Porphyrin-containing compound metabolism.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the geranylgeranyl reductase family. ChlP subfamily.</text>
    </comment>
    <dbReference type="EC" id="1.3.1.83" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ71816.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672455.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02939"/>
    <dbReference type="EnsemblBacteria" id="CTQ71816">
        <property type="protein sequence ID" value="CTQ71816"/>
        <property type="gene ID" value="LAX5112_02939"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00705"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102067">
        <property type="term" value="F:geranylgeranyl diphosphate reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045550">
        <property type="term" value="F:geranylgeranyl reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015995">
        <property type="term" value="P:chlorophyll biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015979">
        <property type="term" value="P:photosynthesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010253">
        <property type="entry name" value="BchP_ChlP_pln/prok"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023753">
        <property type="entry name" value="FAD/NAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011777">
        <property type="entry name" value="Geranylgeranyl_Rdtase_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07992">
        <property type="entry name" value="Pyr_redox_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02023">
        <property type="entry name" value="BchP-ChlP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02032">
        <property type="entry name" value="GG-red-SF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0149">Chlorophyll biosynthesis</keyword>
    <keyword evidence="5" id="KW-0521">NADP</keyword>
    <keyword evidence="4" id="KW-0602">Photosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Pyr_redox_2" evidence="9">
        <location>
            <begin position="5"/>
            <end position="156"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001640"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006632"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012380"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022531"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023444"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00033069"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF07992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ71816.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="401" mass="43565" checksum="192549683F78B27A" modified="2015-12-09" version="1">MKSNFDVAVIGGGPCGAIAAERLAQSGHSVVLVDPDNKIKPCGGAIPSRALKDFEISEDQLVARANAARVIAPSGNAVEMRIGDIGFVGMVDRETFDPYLRARAEQAGARFVRGKLAGMDTGQNGSLDLKVDGTDPHNPGTTEHLNARMVIGADGANSAVRRLMFPAKKKPPYVFAYHEIVESPEVPDPDIFQRDRCDVVYDGRISPDFYGWVFPHGGQTSVGCGSAVKGHNLRDATSDLRDRAGLTGQRTIRREGAPLPLKPMRRWDNGQNVLLAGDAAGTVAPSSGEGIYYAMLCGNLSADAVAECLATGQASALRQARRRFMAEHGRIFFVLGIMQAVWYRSDGLRERFVTMCADPDVQRLTWESYLNKRLVRRDPLGHIRVFFKDLAQLAGLPASQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AC19</accession>
    <name>A0A0M7AC19_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative dioxygenase of extradiol dioxygenase family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03266</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72675.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672685.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03266"/>
    <dbReference type="EnsemblBacteria" id="CTQ72675">
        <property type="protein sequence ID" value="CTQ72675"/>
        <property type="gene ID" value="LAX5112_03266"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051213">
        <property type="term" value="F:dioxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.180.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029068">
        <property type="entry name" value="Glyas_Bleomycin-R_OHBP_Dase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004360">
        <property type="entry name" value="Glyas_Fos-R_dOase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037523">
        <property type="entry name" value="VOC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00903">
        <property type="entry name" value="Glyoxalase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54593">
        <property type="entry name" value="SSF54593"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51819">
        <property type="entry name" value="VOC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0223">Dioxygenase</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="VOC" evidence="1">
        <location>
            <begin position="3"/>
            <end position="128"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51819"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72675.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="137" mass="15299" checksum="D87C2BFCD0F6DFE4" modified="2015-12-09" version="1">MQPCFHLAFHVTNLDDARAFYGELLGCQEGRSTETWVDYNFFGHQLSLHIGMPFETTNTGKVGEHMVPMPHMGAVLDMDTWKKVADRLTSAGVDFVIPPTIRFEGQPGEQSTMFFRDPSGNPIEIKGFADEKGVFAT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AC43</accession>
    <name>A0A0M7AC43_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">MazG domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03185</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72449.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451021.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ72449">
        <property type="protein sequence ID" value="CTQ72449"/>
        <property type="gene ID" value="LAX5112_03185"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd11533">
        <property type="entry name" value="NTP-PPase_Af0060_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044548">
        <property type="entry name" value="AF0060_NTP-PPase_MazG-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004518">
        <property type="entry name" value="MazG_cat"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03819">
        <property type="entry name" value="MazG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MazG" evidence="1">
        <location>
            <begin position="18"/>
            <end position="80"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03819"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72449.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="98" mass="10780" checksum="6D7A028A01BB4875" modified="2015-12-09" version="1">MFQIFELTQADPKSLLQRTLKLSEETGELAEAVLSVTDAPGSAYKAHTLHDVREEAADAALVALSVLAQTCETSEEFSAELDRLMREKSAKWQAKLAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AC50</accession>
    <name>A0A0M7AC50_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Long-chain-fatty-acid--CoA ligase FadD15</fullName>
            <ecNumber evidence="2">6.2.1.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03101</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="6.2.1.3" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72217.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672582.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03101"/>
    <dbReference type="EnsemblBacteria" id="CTQ72217">
        <property type="protein sequence ID" value="CTQ72217"/>
        <property type="gene ID" value="LAX5112_03101"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004467">
        <property type="term" value="F:long-chain fatty acid-CoA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12780">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020845">
        <property type="entry name" value="AMP-binding_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000873">
        <property type="entry name" value="AMP-dep_Synth/Lig"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042099">
        <property type="entry name" value="ANL_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00501">
        <property type="entry name" value="AMP-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00455">
        <property type="entry name" value="AMP_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0436">Ligase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AMP-binding" evidence="1">
        <location>
            <begin position="26"/>
            <end position="482"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72217.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="661" mass="73498" checksum="2A0E1C8FBB49ABEC" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACY5</accession>
    <name>A0A0M7ACY5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Putative N-formylglutamate amidohydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03136</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72312.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03136"/>
    <dbReference type="EnsemblBacteria" id="CTQ72312">
        <property type="protein sequence ID" value="CTQ72312"/>
        <property type="gene ID" value="LAX5112_03136"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007709">
        <property type="entry name" value="N-FG_amidohydro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011227">
        <property type="entry name" value="UCP029730"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05013">
        <property type="entry name" value="FGase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF029730">
        <property type="entry name" value="UCP029730"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ72312.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="296" mass="33114" checksum="D33095827DA22B76" modified="2015-12-09" version="1">MGLVPLSLCRKSGALPRYLHFEIKKITMTDPVPMPDTSFQPFEYVHGDETAGILLLCDHARNTVPDEYGDLGVPAAQFERHIGYDIGARAVTMELARRLNAPACLSMFSRLLIDPNRGEDDPTLIMRLSDGAVVPGNAAVDATERRRRIDLFHKPYHDLIDAALDRMMAVAPAPVIISIHSFTPVWRGVPRPWHVTVLWDSDPRAVDPMLAGLRAQADLVVGDNEPYDGALENDTMYRHATKRGLSQALLEIRQDLIGDNRGAMEWADRLEPILKDLSQSSECRQVRHYVSRCVSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AD07</accession>
    <name>A0A0M7AD07_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative integral membrane protein linked to a cation pump</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03052</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000011">
        <property type="protein sequence ID" value="CTQ72100.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672529.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000011.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03052"/>
    <dbReference type="EnsemblBacteria" id="CTQ72100">
        <property type="protein sequence ID" value="CTQ72100"/>
        <property type="gene ID" value="LAX5112_03052"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008620">
        <property type="entry name" value="FixH"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05751">
        <property type="entry name" value="FixH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="42"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72100.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="170" mass="18329" checksum="806F36BAC09294DB" modified="2015-12-09" version="1">MAMAETNGKDPKAITGKTVLLWLAGFFGVIFLTNGIFLYYAVGTFPGVAVESSYEAGQAYNQEIAAAKAQEQLNWNISSELTRQPDGSGKLLVLAKDAADAPLYGMSVEATLKHPAQVNADLSLILTADGGGRYVSEVEALPAGNWTLLLEVIENGERKFKSENRIFIKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADQ4</accession>
    <name>A0A0M7ADQ4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03406</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ73019.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672833.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ73019">
        <property type="protein sequence ID" value="CTQ73019"/>
        <property type="gene ID" value="LAX5112_03406"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ73019.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="95" mass="10529" checksum="65B68D2D3259844C" modified="2015-12-09" version="1">MITIQDCIGMSDLDEAEILALAEHEHISEIAAAALGAYLLHQPKGADKIVRMIEDDIRDALDRGDKAHAKELFMALRHFLHEHAGELSRRTSALS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AE05</accession>
    <name>A0A0M7AE05_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Putative L,D-transpeptidase YnhG</fullName>
            <ecNumber evidence="5">2.-.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ynhG</name>
        <name evidence="5" type="ORF">LAX5112_03331</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Cell wall biogenesis; peptidoglycan biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the YkuD family.</text>
    </comment>
    <dbReference type="EC" id="2.-.-.-" evidence="5"/>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72847.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672825.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03331"/>
    <dbReference type="EnsemblBacteria" id="CTQ72847">
        <property type="protein sequence ID" value="CTQ72847"/>
        <property type="gene ID" value="LAX5112_03331"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00219"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071972">
        <property type="term" value="F:peptidoglycan L,D-transpeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd16913">
        <property type="entry name" value="YkuD_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.440.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005490">
        <property type="entry name" value="LD_TPept_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038063">
        <property type="entry name" value="Transpep_catalytic_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03734">
        <property type="entry name" value="YkuD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141523">
        <property type="entry name" value="SSF141523"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="YkuD" evidence="4">
        <location>
            <begin position="102"/>
            <end position="237"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004752"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF03734"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ72847.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="246" mass="27678" checksum="A15457E3E033D307" modified="2015-12-09" version="1">MTRRTFESTEAPLALSKGLSRRSLMAGGLVLAAGTLAGCQTYEQVVGLPDQPPLPDEEFDYASAYAALPDGDFTWPAINYKAFDEQYLRQVVEYKTRERPGTIIVDPYNNYLYWVLPGGKALRYGIGVGRAGFAWSGEALIRVKRPHPIWRPPREMIARKPSLERYWEKGFPPGLRNPLGARAMDLWQGSVDTLYRIHGTNKPSSIGRSVSSGCIRMWQQDVIDLFDRVPLRTKVVVLTKDEDIST</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AE65</accession>
    <name>A0A0M7AE65_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Bacterial regulatory proteins, luxR family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_03450</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73179.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ73179">
        <property type="protein sequence ID" value="CTQ73179"/>
        <property type="gene ID" value="LAX5112_03450"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016032">
        <property type="entry name" value="Sig_transdc_resp-reg_C-effctor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000792">
        <property type="entry name" value="Tscrpt_reg_LuxR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00196">
        <property type="entry name" value="GerE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00421">
        <property type="entry name" value="HTH_LUXR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46894">
        <property type="entry name" value="SSF46894"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="43"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="domain" description="HTH luxR-type" evidence="3">
        <location>
            <begin position="109"/>
            <end position="166"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00421"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ73179.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="179" mass="20169" checksum="1206CC5272E04B85" modified="2015-12-09" version="1">MIDASGQFRYRQTLFVVFVLIVFGTSVVEIVTEFMNGETLTTMVDDMSGVAVSALVLMGFAYERRAQHKALKDLRGKLESARGQLAKLDARSPQLAGQYRAVMQKQFDAWSLTASEQDVVIGMLKGLSFREIAELRQTREKTVRQQATSVYRKAGVNSRNELTAWFFEDMLDAPPIHEP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AEE9</accession>
    <name>A0A0M7AEE9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Bacterial extracellular solute-binding proteins, family 3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03551</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73458.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03551"/>
    <dbReference type="EnsemblBacteria" id="CTQ73458">
        <property type="protein sequence ID" value="CTQ73458"/>
        <property type="gene ID" value="LAX5112_03551"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="domain" description="PBPb" evidence="2">
        <location>
            <begin position="52"/>
            <end position="202"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00497"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ73458.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="271" mass="30237" checksum="0848A36C636BFB4D" modified="2015-12-09" version="1">MSDPKATKRIASGLSRRWQAVVAAGLLLTAAASNGSPVQAATAFPELKLLSEDWKPYHYVEDDVVKGQTADLLEKILEKVGSTQTREDIVFLPWARAFREAQVDANTVLFSTGRTPERERLFKWAGPILKFDSYFIGKKERNFEIERSEDLHQYKVGVVIDGASAVFAKRHGIPEENTTFNSQGIFNVKMLAADRIDFIPIQWKNFARLATKAGIDPTEFEPVFLADTVSLNFAFNLKTADGVVARFQTALEEVLGLQEQAKGETPTREVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AF02</accession>
    <name>A0A0M7AF02_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">1-deoxy-D-xylulose 5-phosphate reductoisomerase</fullName>
            <shortName evidence="7">DXP reductoisomerase</shortName>
            <ecNumber evidence="7">1.1.1.267</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">1-deoxyxylulose-5-phosphate reductoisomerase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">2-C-methyl-D-erythritol 4-phosphate synthase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7 11" type="primary">dxr</name>
        <name evidence="11" type="ORF">LAX5112_03458</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>2-C-methyl-D-erythritol 4-phosphate + NADP(+) = 1-deoxy-D-xylulose 5-phosphate + H(+) + NADPH</text>
            <dbReference type="Rhea" id="RHEA:13717"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:57792"/>
            <dbReference type="ChEBI" id="CHEBI:58262"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="EC" id="1.1.1.267"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="7">
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="1 7">Isoprenoid biosynthesis; isopentenyl diphosphate biosynthesis via DXP pathway; isopentenyl diphosphate from 1-deoxy-D-xylulose 5-phosphate: step 1/6.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the DXR family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.267" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73201.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03458"/>
    <dbReference type="EnsemblBacteria" id="CTQ73201">
        <property type="protein sequence ID" value="CTQ73201"/>
        <property type="gene ID" value="LAX5112_03458"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00056">
        <property type="reaction ID" value="UER00092"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030604">
        <property type="term" value="F:1-deoxy-D-xylulose-5-phosphate reductoisomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070402">
        <property type="term" value="F:NADPH binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019288">
        <property type="term" value="P:isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016114">
        <property type="term" value="P:terpenoid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00183">
        <property type="entry name" value="DXP_reductoisom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003821">
        <property type="entry name" value="DXP_reductoisomerase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013644">
        <property type="entry name" value="DXP_reductoisomerase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013512">
        <property type="entry name" value="DXP_reductoisomerase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026877">
        <property type="entry name" value="DXPR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036169">
        <property type="entry name" value="DXPR_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30525">
        <property type="entry name" value="PTHR30525"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08436">
        <property type="entry name" value="DXP_redisom_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02670">
        <property type="entry name" value="DXP_reductoisom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13288">
        <property type="entry name" value="DXPR_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006205">
        <property type="entry name" value="Dxp_reductismrs"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69055">
        <property type="entry name" value="SSF69055"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00243">
        <property type="entry name" value="Dxr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11" id="KW-0413">Isomerase</keyword>
    <keyword evidence="6 7" id="KW-0414">Isoprene biosynthesis</keyword>
    <keyword evidence="3 7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4 7" id="KW-0521">NADP</keyword>
    <keyword evidence="5 7 11" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DXP_reductoisom" evidence="8">
        <location>
            <begin position="16"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="domain" description="DXP_redisom_C" evidence="9">
        <location>
            <begin position="155"/>
            <end position="238"/>
        </location>
    </feature>
    <feature type="domain" description="DXPR_C" evidence="10">
        <location>
            <begin position="270"/>
            <end position="389"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="19"/>
            <end position="48"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="134"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="159"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="161"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="185"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="208"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="230"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005094"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00183"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF02670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF08436"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF13288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ73201.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="401" mass="42748" checksum="0DF66298313D1E96" modified="2015-12-09" version="1">MTAEQEQDYPAKTVRVTVLGATGSIGQSVADLIARNPDRFEVVALIANSSADALAEMALRLNAKSAVLCDPRNFEDLKNRLSGSGIDTASGDQAVFEAVDRDTDLVIGAIVGAAGLLPTMAAIKPGRRIALANKECLVCAGDLFMGKIAAEDAEILPVDSEHNAIFQVFEASHPDSIEKVILTASGGPFRTMAFEDMVRVTPQQALKHPNWDMGARISIDSATMMNKGFEVIEAHHLFPVSEDQLDVLVHPQSAVHGLVQYRDGSLLAQLGSPDMRTPIAHCMAYPRRMQAPVERLDLAKLGSLTFEAPDMNRFPALRIALEALRSGGTAPAVLNAADETAVAAFLKGAIGFMDIPAAVEETLSAFSGKGKLVPAATVEDVLALDQEARVWTGHWISSRAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFR3</accession>
    <name>A0A0M7AFR3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Dipeptide-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">dppA_2</name>
        <name evidence="6" type="ORF">LAX5112_03237</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the bacterial solute-binding protein 5 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72593.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03237"/>
    <dbReference type="EnsemblBacteria" id="CTQ72593">
        <property type="protein sequence ID" value="CTQ72593"/>
        <property type="gene ID" value="LAX5112_03237"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030288">
        <property type="term" value="C:outer membrane-bounded periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030678">
        <property type="entry name" value="Peptide/Ni-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039424">
        <property type="entry name" value="SBP_5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000914">
        <property type="entry name" value="SBP_5_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30290">
        <property type="entry name" value="PTHR30290"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00496">
        <property type="entry name" value="SBP_bac_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002741">
        <property type="entry name" value="MppA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0574">Periplasm</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809292" evidence="4">
        <location>
            <begin position="27"/>
            <end position="534"/>
        </location>
    </feature>
    <feature type="domain" description="SBP_bac_5" evidence="5">
        <location>
            <begin position="71"/>
            <end position="452"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ72593.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="534" mass="58925" checksum="FF1FB1D8113DBB09" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFY5</accession>
    <name>A0A0M7AFY5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Urease subunit beta</fullName>
            <ecNumber evidence="2">3.5.1.5</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="2">Urea amidohydrolase subunit beta</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ureB1</name>
        <name evidence="2" type="synonym">ureB</name>
        <name evidence="3" type="ORF">LAX5112_03746</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>2 H(+) + H2O + urea = CO2 + 2 NH4(+)</text>
            <dbReference type="Rhea" id="RHEA:20557"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16199"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="EC" id="3.5.1.5"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Nitrogen metabolism; urea degradation; CO(2) and NH(3) from urea (urease route): step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Heterotrimer of UreA (gamma), UreB (beta) and UreC (alpha) subunits. Three heterotrimers associate to form the active enzyme.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the urease beta subunit family.</text>
    </comment>
    <dbReference type="EC" id="3.5.1.5" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74065.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673135.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03746"/>
    <dbReference type="EnsemblBacteria" id="CTQ74065">
        <property type="protein sequence ID" value="CTQ74065"/>
        <property type="gene ID" value="LAX5112_03746"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00258">
        <property type="reaction ID" value="UER00370"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035550">
        <property type="term" value="C:urease complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009039">
        <property type="term" value="F:urease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043419">
        <property type="term" value="P:urea catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd00407">
        <property type="entry name" value="Urease_beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.10.150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01954">
        <property type="entry name" value="Urease_beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002019">
        <property type="entry name" value="Urease_beta"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036461">
        <property type="entry name" value="Urease_betasu_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00699">
        <property type="entry name" value="Urease_beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51278">
        <property type="entry name" value="SSF51278"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00192">
        <property type="entry name" value="urease_beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="1 2 3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01954"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ74065.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="103" mass="11085" checksum="C4CE61028A95572D" modified="2015-12-09" version="1">MIPGEIFAADGEIELNAGLETLSLDVSNTGDRPIQVGSHYHFAETNPGLSFDRDAAMGMRLDIPAGTAVRFEPGQTRSVTLVPYRGGRTVYGFNQKVMGKLEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AG75</accession>
    <name>A0A0M7AG75_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03277</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72743.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672706.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03277"/>
    <dbReference type="EnsemblBacteria" id="CTQ72743">
        <property type="protein sequence ID" value="CTQ72743"/>
        <property type="gene ID" value="LAX5112_03277"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ72743.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="161" mass="17768" checksum="4CE76BFA38DDC6AA" modified="2015-12-09" version="1">MSPANIRLVRLTSISLAELTAHMNDPRLAAHMPLLTKAWDDETAAQFIAAKEACWQRDGLGHWAFLNHGRYAGWGGFQKEGDEWDFGLVLKPDCFGLGIAITRKALAFAQADDRMPFVTFLLPPSRKKLGALKRMGASFIGDVDYGGEIFGKYQLVTDIPG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGM5</accession>
    <name>A0A0M7AGM5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Enoyl-[acyl-carrier-protein] reductase [NADH]</fullName>
            <ecNumber evidence="7">1.3.1.9</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">fabI_2</name>
        <name evidence="9" type="ORF">LAX5112_03358</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>a 2,3-saturated acyl-[ACP] + NAD(+) = a (2E)-enoyl-[ACP] + H(+) + NADH</text>
            <dbReference type="Rhea" id="RHEA:10240"/>
            <dbReference type="Rhea" id="RHEA-COMP:9925"/>
            <dbReference type="Rhea" id="RHEA-COMP:9926"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:78784"/>
            <dbReference type="ChEBI" id="CHEBI:78785"/>
            <dbReference type="EC" id="1.3.1.9"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Lipid metabolism; fatty acid biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 7">Belongs to the short-chain dehydrogenases/reductases (SDR) family. FabI subfamily.</text>
    </comment>
    <dbReference type="EC" id="1.3.1.9" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72903.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672771.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03358"/>
    <dbReference type="EnsemblBacteria" id="CTQ72903">
        <property type="protein sequence ID" value="CTQ72903"/>
        <property type="gene ID" value="LAX5112_03358"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00094"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004318">
        <property type="term" value="F:enoyl-[acyl-carrier-protein] reductase (NADH) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016631">
        <property type="term" value="F:enoyl-[acyl-carrier-protein] reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006633">
        <property type="term" value="P:fatty acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014358">
        <property type="entry name" value="Enoyl-ACP_Rdtase_NADH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43159">
        <property type="entry name" value="PTHR43159"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000094">
        <property type="entry name" value="Enoyl-ACP_rdct"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0275">Fatty acid biosynthesis</keyword>
    <keyword evidence="6 7" id="KW-0276">Fatty acid metabolism</keyword>
    <keyword evidence="7" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="6 7" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="5 7 8" id="KW-0520">NAD</keyword>
    <keyword evidence="4 7 9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="binding site" evidence="8">
        <location>
            <position position="13"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="19"/>
            <end position="20"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="64"/>
            <end position="65"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="92"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="162"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009233"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023160"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRNR" id="PIRNR000094"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR000094-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ72903.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="254" mass="26975" checksum="1FF4B0A9EB14D8E7" modified="2015-12-09" version="1">MFDLTGQKALVVGVANDQSIAYGCAKAFKAQGADLAITYLNEKAEPYVRPLAEELGADIIMPLDVRSEDQLDALFGVISEKWGRLDTVLHSIAFSKKEDLHGRVIDCSADGFGLAMDISVHSFLRLIRRAEPLMPHGGTCMTVSFMGAQKVVDNYGVMGPVKAALEAAVRYAASELGQKGISVHALSPGPLKTRAASGIAEFDELLDDAAKRAPTHHLATIEDTGAYAAFLASREAFNVTGGVHPIDGGYSIIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGP1</accession>
    <name>A0A0M7AGP1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DUF302 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03587</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73586.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03587"/>
    <dbReference type="EnsemblBacteria" id="CTQ73586">
        <property type="protein sequence ID" value="CTQ73586"/>
        <property type="gene ID" value="LAX5112_03587"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.310.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005180">
        <property type="entry name" value="DUF302"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035923">
        <property type="entry name" value="TT1751-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03625">
        <property type="entry name" value="DUF302"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103247">
        <property type="entry name" value="SSF103247"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809478" description="DUF302 domain-containing protein" evidence="1">
        <location>
            <begin position="21"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="domain" description="DUF302" evidence="2">
        <location>
            <begin position="64"/>
            <end position="119"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF03625"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ73586.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="159" mass="16954" checksum="8A0284B03F77534B" modified="2015-12-09" version="1">MRFMFPILLTVFLGLGPVQADSIAPREGWQVRPTSQSYQELVEGLKAAVKEAGMLLVTQASASAGAKGRGLTIPGNRVLGVYRNDYAVRMLEASIAAGIEAPIRFYVTENADKTATLSWKTPSFVFAPYMDEGGEKLSGLAAELDGVFQSIADAAVAPQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHQ5</accession>
    <name>A0A0M7AHQ5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">SH3 domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03786</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74177.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03786"/>
    <dbReference type="EnsemblBacteria" id="CTQ74177">
        <property type="protein sequence ID" value="CTQ74177"/>
        <property type="gene ID" value="LAX5112_03786"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010466">
        <property type="entry name" value="DUF1058"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06347">
        <property type="entry name" value="SH3_4"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ74177.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="178" mass="19864" checksum="A87C2BD07465C9F7" modified="2015-12-09" version="1">MARSIAIAFFLLTLGVITGGTSMAPPVFAQGTTTGATGLPVPRFVSLKSDRVNVRLGPSREHDISWTFVQSGLPVEIIQEFENWRRIRDWEGKQGWVFHSLLSGRRTALVTPWERDNRTPLRARSQSDADIVAELEPFVLTAVGECAGGWCRVSGEEFNGWLDQTRLFGVYPDELIED</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJ19</accession>
    <name>A0A0M7AJ19_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 8 10">Thymidine kinase</fullName>
            <ecNumber evidence="2 8 10">2.7.1.21</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8 12" type="primary">tdk</name>
        <name evidence="12" type="ORF">LAX5112_04129</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="8 10">
            <text>ATP + thymidine = ADP + dTMP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:19129"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17748"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:63528"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.1.21"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="8">Homotetramer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 8 11">Belongs to the thymidine kinase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.21" evidence="2 8 10"/>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75155.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673389.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04129"/>
    <dbReference type="EnsemblBacteria" id="CTQ75155">
        <property type="protein sequence ID" value="CTQ75155"/>
        <property type="gene ID" value="LAX5112_04129"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004797">
        <property type="term" value="F:thymidine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071897">
        <property type="term" value="P:DNA biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00124">
        <property type="entry name" value="Thymidine_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001267">
        <property type="entry name" value="Thymidine_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020633">
        <property type="entry name" value="Thymidine_kinase_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11441">
        <property type="entry name" value="PTHR11441"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00265">
        <property type="entry name" value="TK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF035805">
        <property type="entry name" value="TK_cell"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00603">
        <property type="entry name" value="TK_CELLULAR_TYPE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 8 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 8 10" id="KW-0237">DNA synthesis</keyword>
    <keyword evidence="6 8 10" id="KW-0418">Kinase</keyword>
    <keyword evidence="8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5 8 10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8 10" id="KW-0808">Transferase</keyword>
    <keyword evidence="8" id="KW-0862">Zinc</keyword>
    <feature type="active site" description="Proton acceptor" evidence="8 9">
        <location>
            <position position="88"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="9"/>
            <end position="16"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="87"/>
            <end position="90"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="145"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="147"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="182"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="185"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007587"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012118"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022634"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR035805-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU000544"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU004165"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ75155.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="195" mass="21520" checksum="5B955E761B296038" modified="2015-12-09" version="1">MAKLYFNYSSMNAGKSTSLLQAAYNYEERGMNTLLLIAALDDRAGKGRIASRIGLAADADIFSSADDVYAHVDAVRKEREIHAVLVDEAQFLTEEQVWQLARVTDGLRIPVMCFGLRTDFQGKLFPGSAALLAISDNLKEIKTICWCGRKATMVARLDGDGNIVDEGDQVVIGGNDKYISLCRRHWSGRDLGNKQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJ87</accession>
    <name>A0A0M7AJ87_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative ribosomal N-acetyltransferase YdaF</fullName>
            <ecNumber evidence="2">2.3.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ydaF_3</name>
        <name evidence="2" type="ORF">LAX5112_03612</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.3.1.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73654.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673014.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03612"/>
    <dbReference type="EnsemblBacteria" id="CTQ73654">
        <property type="protein sequence ID" value="CTQ73654"/>
        <property type="gene ID" value="LAX5112_03612"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13302">
        <property type="entry name" value="Acetyltransf_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="12"/>
            <end position="167"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ73654.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="189" mass="20715" checksum="BE037A6D16A8B06B" modified="2015-12-09" version="1">MITLPELKSRRLVLRPLTADDASAIAQLGGKDFEIARWLSGVSWPFAEGEAEAYLDTVVGVDPLTHEAAFAITLGGVFIGVVSVIAPGDLDELPDAPSIGYWIGRAFQGHGYASEAVETVLEWGFDVYKSDAIGARAFEENTRSRGLLRKFGFKPYAMTERYAKALDRKVSNVVVCLERSDFEARRQVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJR3</accession>
    <name>A0A0M7AJR3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Salmolysin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">slyA_3</name>
        <name evidence="2" type="ORF">LAX5112_03975</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74791.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673270.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74791">
        <property type="protein sequence ID" value="CTQ74791"/>
        <property type="gene ID" value="LAX5112_03975"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000835">
        <property type="entry name" value="HTH_MarR-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023187">
        <property type="entry name" value="Tscrpt_reg_MarR-type_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01047">
        <property type="entry name" value="MarR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00598">
        <property type="entry name" value="HTHMARR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00347">
        <property type="entry name" value="HTH_MARR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01117">
        <property type="entry name" value="HTH_MARR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50995">
        <property type="entry name" value="HTH_MARR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH marR-type" evidence="1">
        <location>
            <begin position="1"/>
            <end position="138"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74791.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="143" mass="15751" checksum="BD996E9B151AD01C" modified="2015-12-09" version="1">MAFEKNSSAGYLANHMARLFASGLQRRIKPLGLATGQFPALVALWQKEGQTQKDLVAALDIEQATLANTLSRMERDGLVVRKPCDEDGRVQRIHLTPKARALKDDAIGAAIAQNAVALDDFTEEETAQFLELMRRAIASMQSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKP5</accession>
    <name>A0A0M7AKP5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Glycerate dehydrogenase</fullName>
            <ecNumber evidence="6">1.1.1.29</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">LAX5112_03785</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.29" evidence="6"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74174.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673102.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03785"/>
    <dbReference type="EnsemblBacteria" id="CTQ74174">
        <property type="protein sequence ID" value="CTQ74174"/>
        <property type="gene ID" value="LAX5112_03785"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008465">
        <property type="term" value="F:glycerate dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006139">
        <property type="entry name" value="D-isomer_2_OHA_DH_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029753">
        <property type="entry name" value="D-isomer_DH_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029752">
        <property type="entry name" value="D-isomer_DH_CS1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006140">
        <property type="entry name" value="D-isomer_DH_NAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00389">
        <property type="entry name" value="2-Hacid_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02826">
        <property type="entry name" value="2-Hacid_dh_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00065">
        <property type="entry name" value="D_2_HYDROXYACID_DH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00671">
        <property type="entry name" value="D_2_HYDROXYACID_DH_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3 6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="2-Hacid_dh" evidence="4">
        <location>
            <begin position="9"/>
            <end position="323"/>
        </location>
    </feature>
    <feature type="domain" description="2-Hacid_dh_C" evidence="5">
        <location>
            <begin position="113"/>
            <end position="292"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005854"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU003719"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00389"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF02826"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ74174.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="328" mass="36348" checksum="F6469EABB824358D" modified="2015-12-09" version="1">MAKKKPVVVVTRKLPDVVETRMRELFETRLNESDRPFSQAELVEAVRTADVLVPTVTDRIDSSVLSQAGENLKLIANFGNGVDNIDVVTANNRGINVTNTPGVLTEDTADMTMALMLAVPRRLSAGIHALESGDWAGWSPTWMLGHRIWGKRLGIIGMGRIGQAVARRAKAFGMSIHYHNRRRVPTAFEEELEATYWESLDQMLARMDVVSIHCPHTPGTFHLLSARRLKLLKKDAYVVNTARGEVIDENALIRMLEAGELAGAGLDVFEHEPAVNPKLVKLDNVVLLPHMGSATIEGRIEMGEKVIINIKTFMDGHRPPDRVLPSML</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="30" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKZ7</accession>
    <name>A0A0M7AKZ7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Tryptophan synthase alpha chain</fullName>
            <ecNumber evidence="7">4.2.1.20</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7 9" type="primary">trpA</name>
        <name evidence="9" type="ORF">LAX5112_03820</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate + L-serine = D-glyceraldehyde 3-phosphate + H2O + L-tryptophan</text>
            <dbReference type="Rhea" id="RHEA:10532"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:33384"/>
            <dbReference type="ChEBI" id="CHEBI:57912"/>
            <dbReference type="ChEBI" id="CHEBI:58866"/>
            <dbReference type="ChEBI" id="CHEBI:59776"/>
            <dbReference type="EC" id="4.2.1.20"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 7">Amino-acid biosynthesis; L-tryptophan biosynthesis; L-tryptophan from chorismate: step 5/5.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Tetramer of two alpha and two beta chains.</text>
    </comment>
    <comment type="similarity">
        <text evidence="7 8">Belongs to the TrpA family.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.20" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74274.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673125.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03820"/>
    <dbReference type="EnsemblBacteria" id="CTQ74274">
        <property type="protein sequence ID" value="CTQ74274"/>
        <property type="gene ID" value="LAX5112_03820"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00035">
        <property type="reaction ID" value="UER00044"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004834">
        <property type="term" value="F:tryptophan synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd04724">
        <property type="entry name" value="Tryptophan_synthase_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00131">
        <property type="entry name" value="Trp_synth_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011060">
        <property type="entry name" value="RibuloseP-bd_barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018204">
        <property type="entry name" value="Trp_synthase_alpha_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002028">
        <property type="entry name" value="Trp_synthase_suA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43406">
        <property type="entry name" value="PTHR43406"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00290">
        <property type="entry name" value="Trp_syntA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51366">
        <property type="entry name" value="SSF51366"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00262">
        <property type="entry name" value="trpA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00167">
        <property type="entry name" value="TRP_SYNTHASE_ALPHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 7" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="5 7" id="KW-0057">Aromatic amino acid biosynthesis</keyword>
    <keyword evidence="6 7 9" id="KW-0456">Lyase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0822">Tryptophan biosynthesis</keyword>
    <feature type="active site" description="Proton acceptor" evidence="7">
        <location>
            <position position="51"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="7">
        <location>
            <position position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000003"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004733"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022822"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00131"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU003662"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ74274.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="277" mass="29026" checksum="13EDC239910E18E3" modified="2015-12-09" version="1">MTETRIDRRFKACADAGRPALVTFITAGDPDLETSQAILNALPAAGADVIELGMPFSDPMAEGIPIQLANQRALAAGHTMDNTLDMVRTFRKQDQDTPIILMGYFNPIYVRDPKKFVHVAKEAGVDGFIIVDVPAEADDEFCIPALEAGLNFIRLATPTTDDKRLPAVLANTSGFVYYVSVTGITGAQIADTGRVTAAVNRIKGHTDLPVAVGFGVKTADQAAVIGKDADGVVVGSVLVNAVKDSLDADGKATDKTVQAVADVVADLASGCARARAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ALD4</accession>
    <name>A0A0M7ALD4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">UDP-glucose 4-epimerase</fullName>
            <ecNumber evidence="2">5.1.3.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04247</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="5.1.3.2" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75467.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673482.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000021.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04247"/>
    <dbReference type="EnsemblBacteria" id="CTQ75467">
        <property type="protein sequence ID" value="CTQ75467"/>
        <property type="gene ID" value="LAX5112_04247"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003978">
        <property type="term" value="F:UDP-glucose 4-epimerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016040">
        <property type="entry name" value="NAD(P)-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16363">
        <property type="entry name" value="GDP_Man_Dehyd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0413">Isomerase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NAD(P)-bd_dom" evidence="1">
        <location>
            <begin position="8"/>
            <end position="326"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF16363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75467.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="337" mass="37627" checksum="70C49FEC3D763B8C" modified="2015-12-09" version="1">MLQKKRAFITGSAGFIGFHLAELLLQEGWEVAGFDGLSDYYDVRLKERRHEILHQHGTFSSTIAQLEDATSVSESIADFKPDVIIHLAAQAGVRYSLENPRAYVDANVVGTLNVMEAARAANVQHLLMASTSSVYGANTDMPFDENQKTDTPLTIYAATKKANEAMGHAWAHIHQIPITMFRFFTVYGPWGRPDMALFKFTKGILEGTPIDIYNHGEMYRDFTYVADLVRGIRGLMDAVPGSGDATSETDNLSPVAPYRVVNIGNSDKVRLLDFIEAIEDELGKKAIRNLMPMQTGDVPATWADATLLQDLTGYKPETPFREGVAKFVQWYRDYYEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMH9</accession>
    <name>A0A0M7AMH9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Phosphofructokinase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">pfkB</name>
        <name evidence="6" type="ORF">LAX5112_04310</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the carbohydrate kinase PfkB family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000022">
        <property type="protein sequence ID" value="CTQ75636.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04310"/>
    <dbReference type="EnsemblBacteria" id="CTQ75636">
        <property type="protein sequence ID" value="CTQ75636"/>
        <property type="gene ID" value="LAX5112_04310"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016773">
        <property type="term" value="F:phosphotransferase activity, alcohol group as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01164">
        <property type="entry name" value="FruK_PfkB_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1190.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002173">
        <property type="entry name" value="Carboh/pur_kinase_PfkB_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011611">
        <property type="entry name" value="PfkB_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029056">
        <property type="entry name" value="Ribokinase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017583">
        <property type="entry name" value="Tagatose/fructose_Pkinase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00294">
        <property type="entry name" value="PfkB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000535">
        <property type="entry name" value="1PFK/6PFK/LacC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53613">
        <property type="entry name" value="SSF53613"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03168">
        <property type="entry name" value="1-PFK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00583">
        <property type="entry name" value="PFKB_KINASES_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 6" id="KW-0418">Kinase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4 6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PfkB" evidence="5">
        <location>
            <begin position="50"/>
            <end position="343"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010688"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRNR" id="PIRNR000535"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ75636.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="359" mass="38255" checksum="F424ECDDC63B3123" modified="2015-12-09" version="1">MQSRDATDEVESLEPLSPIGEGFSFAQFTGLENDHRLLQNKWDTSETDPMTKVLCIALNPTIDVSCDAERVQSMHKTRTTNQRQDPGGGGVNVARVISELGGDPELTYLSGGATGILLDAFLAETGIALRRFPISNPVRMAFAVHEETSGIEYRFVPEGPEVADGELQPVIDLLGEAGADYVVASGSLPRGVPEDTYAKMIDPVVQRGGRFVIDTSGPALKTALDHGNVFLFKPSLGELQKLAGRPLDEDGVRNFAKELVDKGAAENVTVTLGTKGALLVNKETVLRVPARHVAAKSAVGAGDSFVGALVWSLTQGHPMEKAFRLGVAAGAATALTSGTELCRRTDVLSLYEAEKAERL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AML8</accession>
    <name>A0A0M7AML8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04401</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75897.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673614.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000023.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75897">
        <property type="protein sequence ID" value="CTQ75897"/>
        <property type="gene ID" value="LAX5112_04401"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="34"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="85"/>
            <end position="105"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75897.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="105" mass="11271" checksum="27DF08D13C73FD83" modified="2015-12-09" version="1">MSYAATSLIQTTAPFLLLLIAGLCLAATYITVSRHQRPGDHRSSRIPSFGNWPDEDNTDVKVPDTRLTGAGSFLPAAKDAQVTLGPDCPSRAAGPLFFDGKDRRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANE6</accession>
    <name>A0A0M7ANE6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">C4-dicarboxylate-binding periplasmic protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">dctP_8</name>
        <name evidence="4" type="ORF">LAX5112_04449</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the bacterial solute-binding protein 7 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000024">
        <property type="protein sequence ID" value="CTQ76051.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04449"/>
    <dbReference type="EnsemblBacteria" id="CTQ76051">
        <property type="protein sequence ID" value="CTQ76051"/>
        <property type="gene ID" value="LAX5112_04449"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071702">
        <property type="term" value="P:organic substance transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.190.170">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018389">
        <property type="entry name" value="DctP_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038404">
        <property type="entry name" value="TRAP_DctP_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33376">
        <property type="entry name" value="PTHR33376"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03480">
        <property type="entry name" value="DctP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809481" evidence="3">
        <location>
            <begin position="24"/>
            <end position="354"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ76051.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="354" mass="38661" checksum="8E8CF4E9FE9B8545" modified="2015-12-09" version="1">MISIKSALLGLGLTIAMAGVASAETMLRYSEAGPNRGARAKALQYFLDEASRMTEGRLTFDVHWGGALLKWSAVLNGVAAGAADMGTVIAPYSPKQLQGLAIGDLPISSSDTWVGLRAMHELMTTNEQLKDFLAKENVVFLSNFTSTGTQFECTGDHTIETADDFKGLTVRATGTVGKALNELGANVVNMTFDKVYQALDSGLVDCAAGYYYTNRAFRHYEIVDHITEANWGQVGGFALVMNKDVWEDLPAEYQNAIMTAGSQMIDEFARIQIETINDVKAGLASGEIGRQVPVVALDDAERAKLLAMTDKYVQEWVSDMTERGYDGQAIWDQYAVLVDKYADELNTKGYPWAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AP63</accession>
    <name>A0A0M7AP63_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Nickel transport system permease protein NikB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">nikB_2</name>
        <name evidence="8" type="ORF">LAX5112_04552</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="6">Cell membrane</location>
            <topology evidence="6">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000026">
        <property type="protein sequence ID" value="CTQ76311.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04552"/>
    <dbReference type="EnsemblBacteria" id="CTQ76311">
        <property type="protein sequence ID" value="CTQ76311"/>
        <property type="gene ID" value="LAX5112_04552"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045621">
        <property type="entry name" value="BPD_transp_1_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19300">
        <property type="entry name" value="BPD_transp_1_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="9"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="103"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="142"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="296"/>
            <end position="322"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="7">
        <location>
            <begin position="103"/>
            <end position="313"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ76311.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="330" mass="36656" checksum="9958C48BEC4F0034" modified="2015-12-09" version="1">MLRFTIERLVGMAVTMLLVSMMVFIIMELPPGDYADRYAFRKYSGTGVSVTEADIQAIRVELGLDKPMVLRYFDWIGNIVLRGDFGQAFAFETSVVKVMGDKVWLTLAILFTTLIITYVVSIPIGIYAAVKRGSAADYGLTIFSYLGLALPNFLLALILLYFANRWFGADIGGLFSAEYKNAPWSLAKAWDLIKHLWLPAVVLAWSAVAYQIQTMRATMSDELNRLSVTAARARGVPEGKLLIKYPARLAINPIVSTIGFDVNRIFSELPIVAAVLGLTELGELLLKAYLDLDMYVAGAILLLLTFMIVFMNFLSDILLAWLDPRIKLGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="27" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AP82</accession>
    <name>A0A0M7AP82_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">HTH-type transcriptional repressor CytR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">cytR_2</name>
        <name evidence="5" type="ORF">LAX5112_04559</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000026">
        <property type="protein sequence ID" value="CTQ76331.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673753.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000026.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76331">
        <property type="protein sequence ID" value="CTQ76331"/>
        <property type="gene ID" value="LAX5112_04559"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01392">
        <property type="entry name" value="HTH_LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000843">
        <property type="entry name" value="HTH_LacI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046335">
        <property type="entry name" value="LacI/GalR-like_sensor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00356">
        <property type="entry name" value="LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13377">
        <property type="entry name" value="Peripla_BP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00354">
        <property type="entry name" value="HTH_LACI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50932">
        <property type="entry name" value="HTH_LACI_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH lacI-type" evidence="4">
        <location>
            <begin position="3"/>
            <end position="57"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ76331.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="337" mass="36958" checksum="7F2D60D5C65569C9" modified="2015-12-09" version="1">MTVTLKEVAELAGVSRSAVSRTFTDGASVSDKTRRKVEKAATKLGYTPNILARGLTTRRTKLIGLVSNNFHNPIFLEVFDQFTRKLQGVGLRPLLVNLSDETDPEASVRMLRQYSVDGVVVASSTLPPGFSKAFKDAGVPVVNSFGRYSTAPEFHVVGIDNVECGRMAALELAKRGYKRVAFLGGPDTATSTQDRFKGFSEEISRHPDMEMTVSYAKAYSFEAGREEMQRLLGIRPLAEAYFCGDDVLSIGVLSAIEDAGLNIPGDIGIIGLNDMEMAGWQNINLTTIRQPVQQIINSSVELIVSMLEEPARYPEARLFPCEVIERGTLRPVSYQPT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APL3</accession>
    <name>A0A0M7APL3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DNA gyrase inhibitor YacG</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yacG</name>
        <name evidence="3" type="ORF">LAX5112_04502</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="1">Binds 1 zinc ion.</text>
    </comment>
    <comment type="subunit">
        <text evidence="1">Interacts with GyrB.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the DNA gyrase inhibitor YacG family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000025">
        <property type="protein sequence ID" value="CTQ76180.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04502"/>
    <dbReference type="EnsemblBacteria" id="CTQ76180">
        <property type="protein sequence ID" value="CTQ76180"/>
        <property type="gene ID" value="LAX5112_04502"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008657">
        <property type="term" value="F:DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) inhibitor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.50.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00649">
        <property type="entry name" value="DNA_gyrase_inhibitor_YacG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005584">
        <property type="entry name" value="DNA_gyrase_inhibitor_YacG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013088">
        <property type="entry name" value="Znf_NHR/GATA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03884">
        <property type="entry name" value="YacG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0862">Zinc</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="15"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="42"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="45"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="57"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="61"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00649"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ76180.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="93" mass="10516" checksum="B7640CEB6EF28D40" modified="2015-12-09" version="1">MQTGRLRERSAGRVSSAANALQEGTTLTEENGKKPQRRMRPCPICSKLSTPEDYPFCSDRCAKVDLNRWFSEGYSIPVVETDDLDDEDYPDRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APP7</accession>
    <name>A0A0M7APP7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">D-amino acid dehydrogenase small subunit</fullName>
            <ecNumber evidence="2">1.4.99.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">dadA_3</name>
        <name evidence="2" type="ORF">LAX5112_04525</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.4.99.1" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000025">
        <property type="protein sequence ID" value="CTQ76220.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673718.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000025.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04525"/>
    <dbReference type="EnsemblBacteria" id="CTQ76220">
        <property type="protein sequence ID" value="CTQ76220"/>
        <property type="gene ID" value="LAX5112_04525"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006076">
        <property type="entry name" value="FAD-dep_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01266">
        <property type="entry name" value="DAO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DAO" evidence="1">
        <location>
            <begin position="5"/>
            <end position="395"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01266"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76220.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="418" mass="45762" checksum="CC24649918A37C46" modified="2015-12-09" version="1">MQTFDVMVLGAGIVGVSTAAHLRRLGLDVALIDRKHPGGEASAGNAGVVQHNGFVPQGLPKNPVAFLKSSFNLGGPFSYRPLTLAKMLPWIRQYVQASYGEAAEAYCRAIMPLRQQAVKAHLDLAEQSNAGRFYRKGGWLHLYRTPASFDADDVSRYYARIYGVDYKEMDGAEAGVLEPGLKLTGMKAVHWTESWSVSNPAAVVDAFWRGYIQNGGHYFRADAKKLIRQRGGWSLEGERGPVFARNVVVCLGAWSMDVLKKLGEQYPLAVKRGYHMHYRPLSGASLSRPVVDMDNGFALTPTDFGIRLTTGVELSGRDAPPNPQIIKQVRRRAEEIFSLGRALHEEPWVGSRPCVPDSLPVLGPSPSVKGLWLNFAHGHDGFTLGPVSGQIMADMIANKPLVADVNGVSPARFQTQKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQ90</accession>
    <name>A0A0M7AQ90_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Maltose/maltodextrin import ATP-binding protein MalK</fullName>
            <ecNumber evidence="10">3.6.3.19</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">malK_5</name>
        <name evidence="10" type="ORF">LAX5112_04589</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Peripheral membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.19" evidence="10"/>
    <dbReference type="EMBL" id="CXWD01000026">
        <property type="protein sequence ID" value="CTQ76420.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673774.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000026.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04589"/>
    <dbReference type="EnsemblBacteria" id="CTQ76420">
        <property type="protein sequence ID" value="CTQ76420"/>
        <property type="gene ID" value="LAX5112_04589"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008643">
        <property type="term" value="P:carbohydrate transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03301">
        <property type="entry name" value="ABC_MalK_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015855">
        <property type="entry name" value="ABC_transpr_MalK-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008995">
        <property type="entry name" value="Mo/tungstate-bd_C_term_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013611">
        <property type="entry name" value="Transp-assoc_OB_typ2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08402">
        <property type="entry name" value="TOBE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50331">
        <property type="entry name" value="SSF50331"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 8 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="10" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-0472">Membrane</keyword>
    <keyword evidence="5 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ABC transporter" evidence="9">
        <location>
            <begin position="4"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="36"/>
            <end position="43"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ76420.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="334" mass="36613" checksum="98617D02AEADDD56" modified="2015-12-09" version="1">MGQITLKQVTKRFGNVEVIPSLNLEIGDGEFTVFVGPSGCGKSTLLRLIAGLEDITSGQILIDGKDATSVPPAKRGLAMVFQSYALYPHMSVRKNIAFPLRMAKLDKAEQDRRVEQAAAVLNLTDYLDRRPGQLSGGQRQRVAIGRAIVREPSAFLFDEPLSNLDAALRVGMRLEISELHERLKTTMIYVTHDQVEAMTMADKIVVLRAGNIEQVGSPLELYKNPRNKFVAGFIGSPKMNFIEGAEAAEHGAHTIGIRPEHITVSETEGQWSGVVSVSEHLGSDTFFHVHESGLAETLTVRAGGEVGFRHGDKIYMTPRTDVIHKFDANGLRIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQQ5</accession>
    <name>A0A0M7AQQ5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Thioredoxin reductase</fullName>
            <ecNumber evidence="3">1.8.1.9</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">trxB_3</name>
        <name evidence="6" type="ORF">LAX5112_04722</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>[thioredoxin]-dithiol + NADP(+) = [thioredoxin]-disulfide + H(+) + NADPH</text>
            <dbReference type="Rhea" id="RHEA:20345"/>
            <dbReference type="Rhea" id="RHEA-COMP:10698"/>
            <dbReference type="Rhea" id="RHEA-COMP:10700"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:50058"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="EC" id="1.8.1.9"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="4">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
        <text evidence="4">Binds 1 FAD per subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family.</text>
    </comment>
    <dbReference type="EC" id="1.8.1.9" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000029">
        <property type="protein sequence ID" value="CTQ76841.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673894.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000029.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04722"/>
    <dbReference type="EnsemblBacteria" id="CTQ76841">
        <property type="protein sequence ID" value="CTQ76841"/>
        <property type="gene ID" value="LAX5112_04722"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004791">
        <property type="term" value="F:thioredoxin-disulfide reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019430">
        <property type="term" value="P:removal of superoxide radicals"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023753">
        <property type="entry name" value="FAD/NAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008255">
        <property type="entry name" value="Pyr_nucl-diS_OxRdtase_2_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005982">
        <property type="entry name" value="Thioredox_Rdtase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07992">
        <property type="entry name" value="Pyr_redox_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01292">
        <property type="entry name" value="TRX_reduct"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00573">
        <property type="entry name" value="PYRIDINE_REDOX_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="3" id="KW-0274">FAD</keyword>
    <keyword evidence="3" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="4" id="KW-0521">NADP</keyword>
    <keyword evidence="3 6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2 3" id="KW-0676">Redox-active center</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Pyr_redox_2" evidence="5">
        <location>
            <begin position="7"/>
            <end position="298"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU003880"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003881"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF07992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ76841.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="322" mass="34462" checksum="0CFD0A763F42FD4D" modified="2015-12-09" version="1">MSTKHSKLLIVGSGPAGYTAAIYAARAMIQPTLVAGIQPGGQLTITTDVENYPGFADPVMGPWLMEQMQKQAENVGTEIIYDTIIKADLSVRPFRLEADSGTVFTADTLVIATGAQARWLGLPSEQDYMGAGVSACATCDGFFYRNREVVVVGGGNTAVEEALYLANLASKVTLVHRRDSLRAEKILQDRLFSHEKIEVIWDHQVDEILGGGEPKAVTGVRLKSTKTGELQEISTDGVFIAIGHAPSVELFKDQLTLKPNGYLETDPDSTKTSIPGVFAAGDVTDDIYRQAVTAAGMGCMAALEAEKYLAEQDSVGSQQAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQR6</accession>
    <name>A0A0M7AQR6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DUF4399 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_04851</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000032">
        <property type="protein sequence ID" value="CTQ77249.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673996.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000032.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77249">
        <property type="protein sequence ID" value="CTQ77249"/>
        <property type="gene ID" value="LAX5112_04851"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025512">
        <property type="entry name" value="DUF4399"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14347">
        <property type="entry name" value="DUF4399"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809660" description="DUF4399 domain-containing protein" evidence="1">
        <location>
            <begin position="25"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="domain" description="DUF4399" evidence="2">
        <location>
            <begin position="52"/>
            <end position="144"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF14347"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ77249.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="144" mass="15530" checksum="7D15FCA63ECBA11C" modified="2015-12-09" version="1">MRSYFQSAAMALCLVLPLAFSANAGETPSPDGAKLYFINLKDGDTVKSPVTIQFGLEGMGVAPAGVEKEKTGHHHLIIDETIEGEELNEAIPADDYHKHFGGGQTETTVELAPGEHTLQLVLGDWSHIPHNPPVMSERVTITVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARI1</accession>
    <name>A0A0M7ARI1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Creatinase</fullName>
            <ecNumber evidence="3">3.5.3.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_04781</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.5.3.3" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000030">
        <property type="protein sequence ID" value="CTQ77026.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673940.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000030.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04781"/>
    <dbReference type="EnsemblBacteria" id="CTQ77026">
        <property type="protein sequence ID" value="CTQ77026"/>
        <property type="gene ID" value="LAX5112_04781"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016980">
        <property type="term" value="F:creatinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd01090">
        <property type="entry name" value="Creatinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.350.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029149">
        <property type="entry name" value="Creatin/AminoP/Spt16_NTD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036005">
        <property type="entry name" value="Creatinase/aminopeptidase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039394">
        <property type="entry name" value="Creatinase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000587">
        <property type="entry name" value="Creatinase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000994">
        <property type="entry name" value="Pept_M24"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01321">
        <property type="entry name" value="Creatinase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00557">
        <property type="entry name" value="Peptidase_M24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53092">
        <property type="entry name" value="SSF53092"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55920">
        <property type="entry name" value="SSF55920"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Creatinase_N" evidence="2">
        <location>
            <begin position="29"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_M24" evidence="1">
        <location>
            <begin position="171"/>
            <end position="388"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00557"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01321"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ77026.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="409" mass="46059" checksum="E36B00B5B16B4C74" modified="2015-12-09" version="1">MNDDMIRIYEMNNGEKAFSPFSPQEMDRRQAQLRTLMEDREIDACLFTSYHNICYYSGFLYCYFGRKYGLLVTQDKATTIAAGIDGGQPWRRTHGDTVIYTDWRRDNYFYAIQSLLGLPNASVKRVGIEFDHVSLDLLKQLEAALPGVELVDIAADAMSQRTIKSAEEHVLIREGARICDVGGAALVDAIQAGATEHEVAIASTNAMIREIAKSFPFVELMDTWTWFQSGINTDGAHNPVTNKVVEAGEILSLNCFPMIFGYYTALERTLFCEYASDDHLKLWEVNCHVHREGLKLIKPGARCRDIAAELNDIYRSHDLLKYRSFGYGHSFGVLSHYYGREASVELREDVDTVLEPGMVVSMEPMIMIPEGEPGAGGYREHDILIVTEDGAENITGFPFGPEHNIIPKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARY7</accession>
    <name>A0A0M7ARY7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Spermidine/putrescine transport system permease protein PotB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">potB_4</name>
        <name evidence="7" type="ORF">LAX5112_04779</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000030">
        <property type="protein sequence ID" value="CTQ77020.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008190554.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000030.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04779"/>
    <dbReference type="EnsemblBacteria" id="CTQ77020">
        <property type="protein sequence ID" value="CTQ77020"/>
        <property type="gene ID" value="LAX5112_04779"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="34"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="205"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="235"/>
            <end position="253"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="290"/>
            <end position="310"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="342"/>
            <end position="361"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="388"/>
            <end position="409"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="201"/>
            <end position="409"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ77020.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="421" mass="46707" checksum="4E868F7C24D21FAB" modified="2015-12-09" version="1">MSDTTAGEVLTTQDGKPLKAALAKALRREKLRSLALIAPLLVFILITFVAPIVDMLFRSVENGIVADTLPRTVIALQEWDPNSGQIPDETVFAALYGDLLVAVDKKTHTRLGSRLNYEESGISSLFRKTGRRIKRMDEDSAFQAQFIDADKKWGQVETWQVLQQFSPRYTDGYFLNSVDAHRTVDGIELKPADERIYMFLFARTLFLSIVITLSCLLLGYPIAFLLASLPLRTSNLLMILVLLPFWTSLLVRTSAWKVLLQQQGVINDFLVWIGIIGDANRLVMINNQTGTIIAMTHILLPFMILPLFSVMKTISPTYVRAAKSLGANDWTAFWRVYFPQSVPGIGAGAVLVFILSIGYYITPELVGGTSGIFISNRIAYHISSSLNWGLAAALGTLLLVAVMVLFVVYDRIVGIDNVKLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AS15</accession>
    <name>A0A0M7AS15_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system</fullName>
            <ecNumber evidence="2">2.3.1.12</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">acoC_2</name>
        <name evidence="2" type="ORF">LAX5112_04845</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.3.1.12" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000032">
        <property type="protein sequence ID" value="CTQ77232.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04845"/>
    <dbReference type="EnsemblBacteria" id="CTQ77232">
        <property type="protein sequence ID" value="CTQ77232"/>
        <property type="gene ID" value="LAX5112_04845"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004742">
        <property type="term" value="F:dihydrolipoyllysine-residue acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000073">
        <property type="entry name" value="AB_hydrolase_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12697">
        <property type="entry name" value="Abhydrolase_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00111">
        <property type="entry name" value="ABHYDROLASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="AB hydrolase-1" evidence="1">
        <location>
            <begin position="28"/>
            <end position="253"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12697"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77232.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="265" mass="28697" checksum="2732A90DCC6FBD64" modified="2015-12-09" version="1">MTDLRPNPCTTLPFREQVCEIGDDGAPVILLHGFGGDRQTWVNIQTGLASRKRSLAFDLPGHGEALDWPKVGHAGISAKAVTQSIEALELKRVHLVGHSMGGAVAALVALRAPELVASLTLLAPGGFGPEINHRLLRRYAVASETAEMEVLLEQFFGWEFKLPKFLAKTAAESRARPGGAATLSAIADEIIDGSVQKTLPRDDMAALPMPIKVLWGTQDRVLPTRQAHKLPGIVATHIFERVGHMVHLEIPKETTRLILQNAATE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AS18</accession>
    <name>A0A0M7AS18_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Parvulin-like PPIase</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Peptidyl-prolyl cis-trans isomerase plp</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">Rotamase plp</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="10" type="primary">cbf2</name>
        <name evidence="10" type="ORF">LAX5112_04839</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the PpiC/parvulin rotamase family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000032">
        <property type="protein sequence ID" value="CTQ77216.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04839"/>
    <dbReference type="EnsemblBacteria" id="CTQ77216">
        <property type="protein sequence ID" value="CTQ77216"/>
        <property type="gene ID" value="LAX5112_04839"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003755">
        <property type="term" value="F:peptidyl-prolyl cis-trans isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007049">
        <property type="term" value="P:cell cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.50.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000048">
        <property type="entry name" value="IQ_motif_EF-hand-BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046357">
        <property type="entry name" value="PPIase_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000297">
        <property type="entry name" value="PPIase_PpiC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023058">
        <property type="entry name" value="PPIase_PpiC_CS"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50096">
        <property type="entry name" value="IQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01096">
        <property type="entry name" value="PPIC_PPIASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50198">
        <property type="entry name" value="PPIC_PPIASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="3" id="KW-0132">Cell division</keyword>
    <keyword evidence="7 10" id="KW-0413">Isomerase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0697">Rotamase</keyword>
    <keyword evidence="8" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="8">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5007778402" description="Parvulin-like PPIase" evidence="8">
        <location>
            <begin position="30"/>
            <end position="287"/>
        </location>
    </feature>
    <feature type="domain" description="PpiC" evidence="9">
        <location>
            <begin position="141"/>
            <end position="231"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007656"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00018370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00030642"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00031484"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00278"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50198"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ77216.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="287" mass="31565" checksum="A55A05221C25412C" modified="2015-12-09" version="1">MLRNSMRRPIKALAVSIMALTLGSASLSAAEPDDVVAKVGDAVITEADIAFAAQDLGQELQRFPAAQWRQLLLDVMIDMELLALAAKNDGLDQDPDFKKQLEFLELRALRNAYLGQKINASITDADVKTAYDKEFADFEGPEEINARHILVEDKAAAEALITELDGGADFAELAKEKSTGPSGPNGGDLGYFAKGQMVPPFEEAAFALEPGSFTKEPVETQFGWHIIKVEDKRRQEKPALDTVEANLRQQLARERYEARMVELKDEYAVEILDEQLANADAEKPAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AS24</accession>
    <name>A0A0M7AS24_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_05019</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000041">
        <property type="protein sequence ID" value="CTQ77699.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674141.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000041.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77699">
        <property type="protein sequence ID" value="CTQ77699"/>
        <property type="gene ID" value="LAX5112_05019"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809903" evidence="1">
        <location>
            <begin position="24"/>
            <end position="107"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77699.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="107" mass="11751" checksum="D3CF85549D8A345B" modified="2015-12-09" version="1">MLCRSLIRGWCIALVIAIQFSFAFDMPVAHAQRAPDTNSMTCEAAQNYTKSQGRANFRTGNQSFEQVVASVEHCVDPQVALIPVSAPTKDNKSCVVGYECVRQRGGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AS84</accession>
    <name>A0A0M7AS84_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Ribose transport system permease protein RbsC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">rbsC_5</name>
        <name evidence="7" type="ORF">LAX5112_04594</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000026">
        <property type="protein sequence ID" value="CTQ76434.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673777.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000026.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04594"/>
    <dbReference type="EnsemblBacteria" id="CTQ76434">
        <property type="protein sequence ID" value="CTQ76434"/>
        <property type="gene ID" value="LAX5112_04594"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001851">
        <property type="entry name" value="ABC_transp_permease"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02653">
        <property type="entry name" value="BPD_transp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="20"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="52"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="104"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="137"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="176"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="231"/>
            <end position="249"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="261"/>
            <end position="278"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="285"/>
            <end position="302"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="308"/>
            <end position="327"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ76434.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="338" mass="35451" checksum="3738820CCC9420AC" modified="2015-12-09" version="1">MTSVSENNADKASKRFAIDLKTLGPALALLLLCVIGFLLNPAFVSEGNITNLLTRSAFIGIIAVGATFVITAGGIDLSVGSMAAAISGVMIIVMNNAVETLGTGVPTVLFGCGLAILLGIGAGWINGALTTKGKIEAFIVTLGTMGIYRSLVTYFADGGTLSLNFDIRGTYRPVYYDSFLGLPIPVWVFIAVAICGWLLLNRTAFGRYCTAIGSNEAVAKYSAINVDRVKTLTYIIQGLCVSFATIIYVPRLGSASASTGVLWELEAIAAVIIGGTVLKGGYGRIGGTILGALILTTIGNILNFTDMISNYLNGTMQGLIIIVAVLLQRSDWKLKKNG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ASV6</accession>
    <name>A0A0M7ASV6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04657</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000028">
        <property type="protein sequence ID" value="CTQ76644.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76644">
        <property type="protein sequence ID" value="CTQ76644"/>
        <property type="gene ID" value="LAX5112_04657"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ76644.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="29" mass="3184" checksum="C59CFB9D83DB39D4" modified="2015-12-09" version="1">MLAEIHEQSAETNGKLLRVVDQIASIFLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZMK1</accession>
    <name>A0A0M6ZMK1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00139</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63988.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ63988">
        <property type="protein sequence ID" value="CTQ63988"/>
        <property type="gene ID" value="LAX5112_00139"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ63988.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="163" mass="18114" checksum="521196200EDED047" modified="2015-12-09" version="1">MAVFRGLSDEKSHATRSEPGQIHQFQTRLRLQSAQGPTSVSCFDAPQSTPHGHFPVIAVTYPGQSPVETGFALGETWSIQSCAQLNVLILFYFQSSAPACQHEAGLFYIMPVPVRDRPVPVRQKGIRNFQYGQIVLPNMTQSRLNPRMCFKKLHEGTGLIGPF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZP44</accession>
    <name>A0A0M6ZP44_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00148</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64011.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00148"/>
    <dbReference type="EnsemblBacteria" id="CTQ64011">
        <property type="protein sequence ID" value="CTQ64011"/>
        <property type="gene ID" value="LAX5112_00148"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019225">
        <property type="entry name" value="DUF2155"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09923">
        <property type="entry name" value="DUF2155"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="150"/>
            <end position="192"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ64011.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="192" mass="20818" checksum="3E222E855EA7D7ED" modified="2015-12-09" version="1">MRIWSELMPHVFFDGRTVLKPAALAFGLGILALQPQAALAQAESEKIENPVAVFSGLDKITGRIINFDVYVGETVQFGALQVTPRVCHTRPQTESPLTTGFVQVDEITLNNEVRRIFSGWMYAASPGLHAVEHPVYDIWLTDCRLASKVPPPEDYDGPPIKGVVAEGEDPLAGPDDGVDTGPGIPRAKPFQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZP85</accession>
    <name>A0A0M6ZP85_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00138</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63986.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670163.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00138"/>
    <dbReference type="EnsemblBacteria" id="CTQ63986">
        <property type="protein sequence ID" value="CTQ63986"/>
        <property type="gene ID" value="LAX5112_00138"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005808870" evidence="1">
        <location>
            <begin position="25"/>
            <end position="291"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ63986.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="291" mass="33440" checksum="5E1EEF5F215F85F9" modified="2015-12-09" version="1">MPGSRAVLVLVLMLWISASSGVQAQQIVRLGIEHYDDGDDRYEVSLLKLALEHSGEDAVLEVVSLGDTTQERVLIEFEQGRSNFDVFYSGGSPQREKRFEQIDIPLSRGLLGHRIFVTRKDQLDQLAQIKTLDEFRDYAVIGSGFGWPDTDIFRAAGFKVLPAEWKNIWRMLSVGRTNVFNLGVHEAHAERANFDEIYPNLTVDNNLLVKYRFGFFFYVRKDNRAVAELIERGLERAYEAGAFMQLFETHPRIQTALGHIRQNDLTVLEIANPFLSDRHRAIPDRYWHDVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPJ8</accession>
    <name>A0A0M6ZPJ8_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Sec-independent protein translocase protein TatC</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 6" type="primary">tatC</name>
        <name evidence="6" type="ORF">LAX5112_00176</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">The Tat system comprises two distinct complexes: a TatABC complex, containing multiple copies of TatA, TatB and TatC subunits, and a separate TatA complex, containing only TatA subunits. Substrates initially bind to the TatABC complex, which probably triggers association of the separate TatA complex to form the active translocon.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the TatC family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ64096.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670186.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00176"/>
    <dbReference type="EnsemblBacteria" id="CTQ64096">
        <property type="protein sequence ID" value="CTQ64096"/>
        <property type="gene ID" value="LAX5112_00176"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033281">
        <property type="term" value="C:TAT protein transport complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008320">
        <property type="term" value="F:protein transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043953">
        <property type="term" value="P:protein transport by the Tat complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00902">
        <property type="entry name" value="TatC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019820">
        <property type="entry name" value="Sec-indep_translocase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002033">
        <property type="entry name" value="TatC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30371">
        <property type="entry name" value="PTHR30371"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00902">
        <property type="entry name" value="TatC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01840">
        <property type="entry name" value="TATCFAMILY"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00945">
        <property type="entry name" value="tatC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01218">
        <property type="entry name" value="TATC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-0653">Protein transport</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0811">Translocation</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="24"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="80"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="113"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="166"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="207"/>
            <end position="222"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00902"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ64096.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="266" mass="29442" checksum="9465926011948AF1" modified="2015-12-09" version="1">MSQEDIDASKAPLIEHLIELRQRLMWSIAAILAMFVICFYFATDIYNILTVPYLRAAPDPEHVKMIFTAPQEWFFTQLKLALFGALFLAFPVIASQIYMFVAPGLYKHERGAFLPFLAATPILFLIGACLVYFLVMPMAMGFFLSMEQTGGSGQVAIEHLAKVSEYLGLIMILIFAFGLVFQLPVILTLLGRAGMVTADGLKQKRKYAIVGAFAAAAILTPPDPISQIGLALPTLLLYEVSILSVRMVEKKRAEREAEREAEDAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZPN6</accession>
    <name>A0A0M6ZPN6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit B</fullName>
            <ecNumber evidence="3">2.8.3.5</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">scoB</name>
        <name evidence="3" type="ORF">LAX5112_00376</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the 3-oxoacid CoA-transferase subunit B family.</text>
    </comment>
    <dbReference type="EC" id="2.8.3.5" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64715.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008190858.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00376"/>
    <dbReference type="EnsemblBacteria" id="CTQ64715">
        <property type="protein sequence ID" value="CTQ64715"/>
        <property type="gene ID" value="LAX5112_00376"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008260">
        <property type="term" value="F:3-oxoacid CoA-transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012791">
        <property type="entry name" value="3-oxoacid_CoA-transf_B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004165">
        <property type="entry name" value="CoA_trans_fam_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037171">
        <property type="entry name" value="NagB/RpiA_transferase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13707">
        <property type="entry name" value="PTHR13707"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01144">
        <property type="entry name" value="CoA_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00882">
        <property type="entry name" value="CoA_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100950">
        <property type="entry name" value="SSF100950"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02428">
        <property type="entry name" value="pcaJ_scoB_fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007047"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ64715.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="208" mass="22190" checksum="F98701ECA9ADB398" modified="2015-12-09" version="1">MAWTRDDMAARAAKELHDGFYVNLGIGIPTLVSNYIPDGMHVTLQSENGMLGMGPFPTDDEVDADLINAGKQTITELPQTSYFSSADSFGMIRGGHIDLSILGAMEVSQNGDLANWMIPGKMVKGMGGAMDLVAGVKRVVVIMDHTSKAGDPKLLKECTLPLTGVRCVDRVITGLGVFDITPHGLTVVELAQDVSLDEVKSKTEANVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQN5</accession>
    <name>A0A0M6ZQN5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00506</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65089.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ65089">
        <property type="protein sequence ID" value="CTQ65089"/>
        <property type="gene ID" value="LAX5112_00506"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ65089.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="89" mass="9925" checksum="9147EF8647BF1C46" modified="2015-12-09" version="1">MIQFEWRFSLRGAVCPGQGAYLLRTGRGCKRLFELFLKVTPSCLFARSFLGNRGFDCAQALLEGCALCRLMPFSNRLAALKLSYPAIVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZQS8</accession>
    <name>A0A0M6ZQS8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_00092</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63854.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670131.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000001.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ63854">
        <property type="protein sequence ID" value="CTQ63854"/>
        <property type="gene ID" value="LAX5112_00092"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ63854.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="96" mass="10498" checksum="4CDB2E2038194BFE" modified="2015-12-09" version="1">MRTFSTTDRDLAIGSKLGEIIQNSTGRAKFAEHPEATLSELGLATDVKIYADTADKVHLVIPAKIDEARVAAGDETYFEELGRLALASCHYEEMPD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZR80</accession>
    <name>A0A0M6ZR80_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Sulfoacetaldehyde reductase</fullName>
            <ecNumber evidence="2">1.1.1.313</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">isfD_1</name>
        <name evidence="2" type="ORF">LAX5112_00119</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the short-chain dehydrogenases/reductases (SDR) family.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.313" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000001">
        <property type="protein sequence ID" value="CTQ63933.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00119"/>
    <dbReference type="EnsemblBacteria" id="CTQ63933">
        <property type="protein sequence ID" value="CTQ63933"/>
        <property type="gene ID" value="LAX5112_00119"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00106">
        <property type="entry name" value="adh_short"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU000363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ63933.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="267" mass="28499" checksum="36DA0CC23561679A" modified="2015-12-09" version="1">MSIVSYVAAPLDGAVWITGASSGIGRELALEMARAGWTVAVTARSEDALAELKDAASDFSGSIQVYAGDVSDTTLMAAHCASIATEHRLALVVANAGIYLPQDGLDGDAEAYRKTFDVNLMGTVNVVLPAINVMKAAGQGQMAIVSSVAGYRGLPTSAAYGASKAALFNFAESLRFDLERAGIRLQVISPGFVDTPATKSNPFPMPHLISPQEAVRGIIDGLQDRKHFEISFPKAFVRQLKAIQFLPFNLYYKLVRKTTGWDQKGKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="28" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZRX1</accession>
    <name>A0A0M6ZRX1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">L-Ala-D/L-Glu epimerase</fullName>
            <ecNumber evidence="2">5.1.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ykfB_2</name>
        <name evidence="2" type="ORF">LAX5112_00639</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="5.1.1.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65468.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670594.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00639"/>
    <dbReference type="EnsemblBacteria" id="CTQ65468">
        <property type="protein sequence ID" value="CTQ65468"/>
        <property type="gene ID" value="LAX5112_00639"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.390.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036849">
        <property type="entry name" value="Enolase-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029017">
        <property type="entry name" value="Enolase-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029065">
        <property type="entry name" value="Enolase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013342">
        <property type="entry name" value="Mandelate_racemase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013341">
        <property type="entry name" value="Mandelate_racemase_N_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13378">
        <property type="entry name" value="MR_MLE_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02746">
        <property type="entry name" value="MR_MLE_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00922">
        <property type="entry name" value="MR_MLE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51604">
        <property type="entry name" value="SSF51604"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54826">
        <property type="entry name" value="SSF54826"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0413">Isomerase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MR_MLE" evidence="1">
        <location>
            <begin position="144"/>
            <end position="237"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00922"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65468.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="370" mass="40286" checksum="F4EAF68F664B4154" modified="2015-12-09" version="1">MKITRIRVYKTDLPYVDGAYGWGAGNAITVAKASVVVIDTDAGVQGCGEFTPCGENYMVAHSEGVEALARLVAPVLLGEDPRQVARIEQILDHTIQGHSYAKAPFDAACWDILGKSLEVPVWLLLGGKLTDGAPMYRVAPHRGTEETITELDRHRAAGYRQFQIKVGADWSTDIERIRATVPLLKPGEKAMADANQGWRVDNALRVARATRDLDFIFEQPCRTYEECLQVRRRIDLPMKLDECVTGMRAAQRIVADQGADLVCLKISNLGGLSKARRFRDFFLDNRIPVVAEDTWGGEIATATLAHFAASTPADYLQNTTDLCNYNTRSTGTPAPKTEGGKLFASDMPGLGVAPDFAALGDPVATYGEAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZS45</accession>
    <name>A0A0M6ZS45_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Ectoine utilization protein EutE</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">LAX5112_00443</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ64910.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670403.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00443"/>
    <dbReference type="EnsemblBacteria" id="CTQ64910">
        <property type="protein sequence ID" value="CTQ64910"/>
        <property type="gene ID" value="LAX5112_00443"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016811">
        <property type="term" value="F:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016788">
        <property type="term" value="F:hydrolase activity, acting on ester bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007036">
        <property type="entry name" value="Aste_AspA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014336">
        <property type="entry name" value="DoeB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043795">
        <property type="entry name" value="N-alpha-Ac-DABA-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04952">
        <property type="entry name" value="AstE_AspA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF039012">
        <property type="entry name" value="ASP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02994">
        <property type="entry name" value="ectoine_eutE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ64910.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="329" mass="34838" checksum="6715F86DE1457BE2" modified="2015-12-09" version="1">MTGNPISPTVPFDQDGIHHGFLRLPYSRDDSAWGSVMIPITVVRSGDGPTALLTGGNHGDEYEGPIALQELAATLKPEDIRGRVIIVPALNHPAFLAGTRTSPVDKGNLNRSFPGKPDGTVTQKIAHYVDTVLIPMADIVLDYHSGGKTLDFVPFAAAHVLENKDQQAACVAAMQAFNAPYSAIMLEIDSVGMLDTAVEQKGKVFVTTELGGGGTATARSIGIAKKGVRNLLKHTGILSGELELSPTVTLDMPDGECFVFCEQGGMIEPVCDLGDAVAEGDIVARVWPIDRTGANPVEYQAKRSGILMARHFPGLVKMGDCLAVVAKVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZSW1</accession>
    <name>A0A0M6ZSW1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">N-acyltransferase YncA</fullName>
            <ecNumber evidence="2">2.3.1.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">yncA</name>
        <name evidence="2" type="ORF">LAX5112_00597</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.3.1.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000002">
        <property type="protein sequence ID" value="CTQ65352.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670565.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000002.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00597"/>
    <dbReference type="EnsemblBacteria" id="CTQ65352">
        <property type="protein sequence ID" value="CTQ65352"/>
        <property type="gene ID" value="LAX5112_00597"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="1"/>
            <end position="155"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65352.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="172" mass="18945" checksum="1808309E6206AD9B" modified="2015-12-09" version="1">MPLRDAEPGDIPAILALYNQAVRETTAAWTSQEETLDERITWFETRQNAGWPVIVVTSPEGKLIGFASYGAFRPREGYRKTLEHTVYVDPDFQGQGIGAKLLQQLIDKAQAQEVHVLVGVVDGDNTASIALHKKLGFEIAGRLPEAGTKFGRWLDLVFLTKIVTPGLDSPDV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTI5</accession>
    <name>A0A0M6ZTI5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_00666</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65531.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00666"/>
    <dbReference type="EnsemblBacteria" id="CTQ65531">
        <property type="protein sequence ID" value="CTQ65531"/>
        <property type="gene ID" value="LAX5112_00666"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="20"/>
            <end position="42"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ65531.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="156" mass="17395" checksum="301379393A416C50" modified="2015-12-09" version="1">MGQSHSHRGHHHHHDHDHAHPRDHNHGGPDHLHSHVHGTSASERAEELQTLSASFIDGFRQAEDKTSYLRIAGIPFQKEGADGLMQHLVDAQIVSNWQIGTASPAFASRELVYMPFPGTMVEQRETMTFTYVSLTERADIDLLTLLSHRLEAGAGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZTM0</accession>
    <name>A0A0M6ZTM0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Iron-sulfur cluster carrier protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">LAX5112_00880</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the Mrp/NBP35 ATP-binding proteins family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">In the C-terminal section; belongs to the Mrp/NBP35 ATP-binding proteins family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">In the N-terminal section; belongs to the MIP18 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66129.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00880"/>
    <dbReference type="EnsemblBacteria" id="CTQ66129">
        <property type="protein sequence ID" value="CTQ66129"/>
        <property type="gene ID" value="LAX5112_00880"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140663">
        <property type="term" value="F:ATP-dependent FeS chaperone activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016226">
        <property type="term" value="P:iron-sulfur cluster assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.130">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02040">
        <property type="entry name" value="Mrp_NBP35"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034904">
        <property type="entry name" value="FSCA_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002744">
        <property type="entry name" value="MIP18-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019591">
        <property type="entry name" value="Mrp/NBP35_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000808">
        <property type="entry name" value="Mrp_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044304">
        <property type="entry name" value="NUBPL-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033756">
        <property type="entry name" value="YlxH/NBP35"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42961">
        <property type="entry name" value="PTHR42961"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01883">
        <property type="entry name" value="FeS_assembly_P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10609">
        <property type="entry name" value="ParA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF117916">
        <property type="entry name" value="SSF117916"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01215">
        <property type="entry name" value="MRP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-0408">Iron</keyword>
    <keyword evidence="5" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3 5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FeS_assembly_P" evidence="7">
        <location>
            <begin position="18"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="92"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="147"/>
            <end position="154"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008205"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02040"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF01883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ66129.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="391" mass="40807" checksum="A83F3C967CD68451" modified="2015-12-09" version="1">MSLKAKSRGKADVSLSRETVIETLKAVVDPVTGEDLPATGMIRGLKVADGTVRFVLQIDQTRVDEMERLREDAVQRLEALPDCTSAQVILTSHSDQSTAHAPAAPAAPVPQAGPGELKPIKPIPAAPGTSGPRHVAGIKKIIAIASGKGGVGKSTVASNLACALAAQGLKVGLLDADVYGPSQPEMLGIKGRPSSPDGQTILPLRNHGVTLMSIGLMTSGDKAVVWRGPMLMGALQQMMTQVQWGALDVLIVDLPPGTGDVQMTLSQKFIVDGAVIVSTPQDIALLDARKGIDMFQEMKVPILGMVENMSTHICSKCGNEEHIFGHGGVAKEAASLRVPVLAEIPLHLNIRTAADGDTPAVIKAPDAPESAAFKKLATAVTEKLAAQESLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZV24</accession>
    <name>A0A0M6ZV24_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Citrate synthase (unknown stereospecificity)</fullName>
            <ecNumber evidence="2">2.3.3.16</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">gltA_1</name>
        <name evidence="5" type="ORF">LAX5112_00863</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Carbohydrate metabolism; tricarboxylic acid cycle; isocitrate from oxaloacetate: step 1/2.</text>
    </comment>
    <dbReference type="EC" id="2.3.3.16" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66081.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670761.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00863"/>
    <dbReference type="EnsemblBacteria" id="CTQ66081">
        <property type="protein sequence ID" value="CTQ66081"/>
        <property type="gene ID" value="LAX5112_00863"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00223">
        <property type="reaction ID" value="UER00717"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0036440">
        <property type="term" value="F:citrate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006099">
        <property type="term" value="P:tricarboxylic acid cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.580.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016142">
        <property type="entry name" value="Citrate_synth-like_lrg_a-sub"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016143">
        <property type="entry name" value="Citrate_synth-like_sm_a-sub"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002020">
        <property type="entry name" value="Citrate_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036969">
        <property type="entry name" value="Citrate_synthase_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11739">
        <property type="entry name" value="PTHR11739"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00285">
        <property type="entry name" value="Citrate_synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00143">
        <property type="entry name" value="CITRTSNTHASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48256">
        <property type="entry name" value="SSF48256"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="3" id="KW-0816">Tricarboxylic acid cycle</keyword>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="239"/>
            <end position="263"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004751"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012972"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022532"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ66081.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="263" mass="27983" checksum="E67C62D3C1B89CFD" modified="2015-12-09" version="1">MSENTDVADWWRTSIIDMEPGRIALRGHPVEELIGNRGFAQMIWLMVTGKEISGKRASLFEAALVAAVDHGPQAPSIAAARMATTCGVGLQSAMATGLNMLGDVHGGAGEQAVELYREIETAGLDELGTTLDTWRQANGRFIPGFGHRFHKPVDPRAPRLLGLVDEAAGAGEVSGAYAEIGRAIEAHLATERGKPVPMNIDGATAVIYAELGCPAPLARGFFGLSRSVGILAHAWEQTEQGGRNKGPTPPHYRWTYDEGSGSD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVC9</accession>
    <name>A0A0M6ZVC9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 5">D-ribose pyranase</fullName>
            <ecNumber evidence="2 5">5.4.99.62</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 6" type="primary">rbsD</name>
        <name evidence="6" type="ORF">LAX5112_00905</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 5">
            <text>beta-D-ribopyranose = beta-D-ribofuranose</text>
            <dbReference type="Rhea" id="RHEA:25432"/>
            <dbReference type="ChEBI" id="CHEBI:27476"/>
            <dbReference type="ChEBI" id="CHEBI:47002"/>
            <dbReference type="EC" id="5.4.99.62"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="5">Carbohydrate metabolism; D-ribose degradation; D-ribose 5-phosphate from beta-D-ribopyranose: step 1/2.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Homodecamer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the RbsD / FucU family. RbsD subfamily.</text>
    </comment>
    <dbReference type="EC" id="5.4.99.62" evidence="2 5"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66196.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670790.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000003.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00905"/>
    <dbReference type="EnsemblBacteria" id="CTQ66196">
        <property type="protein sequence ID" value="CTQ66196"/>
        <property type="gene ID" value="LAX5112_00905"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00916">
        <property type="reaction ID" value="UER00888"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0062193">
        <property type="term" value="F:D-ribose pyranase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016872">
        <property type="term" value="F:intramolecular lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048029">
        <property type="term" value="F:monosaccharide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019303">
        <property type="term" value="P:D-ribose catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1650.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01661">
        <property type="entry name" value="D_rib_pyranase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023064">
        <property type="entry name" value="D-ribose_pyranase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023750">
        <property type="entry name" value="RbsD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007721">
        <property type="entry name" value="RbsD_FucU"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37831">
        <property type="entry name" value="PTHR37831"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05025">
        <property type="entry name" value="RbsD_FucU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF102546">
        <property type="entry name" value="SSF102546"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="3 5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 5 6" id="KW-0413">Isomerase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Substrate binding" evidence="5">
        <location>
            <begin position="125"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="5">
        <location>
            <position position="20"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="28"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="103"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000223"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012862"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01661"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ66196.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="136" mass="14739" checksum="26D4E7069FDE3B49" modified="2015-12-09" version="1">MKRTPMLNRHMSTLIASLGHMDEIVIADAGLPVPPGVDVIDIAVSPGVPGFFDVLDVLTSELVVEKAVFAEEASAELATEIEVRLAHWAAETGKPIEHDRVPHEDFKTRTKQARAVIRTGECTPYANVILVSGVPF</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZVJ6</accession>
    <name>A0A0M6ZVJ6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Methanesulfonate monooxygenase</fullName>
            <ecNumber evidence="2">1.14.14.5</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">msuD</name>
        <name evidence="2" type="ORF">LAX5112_01101</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.14.14.5" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66809.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670966.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01101"/>
    <dbReference type="EnsemblBacteria" id="CTQ66809">
        <property type="protein sequence ID" value="CTQ66809"/>
        <property type="gene ID" value="LAX5112_01101"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008726">
        <property type="term" value="F:alkanesulfonate monooxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011251">
        <property type="entry name" value="Luciferase-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036661">
        <property type="entry name" value="Luciferase-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00296">
        <property type="entry name" value="Bac_luciferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51679">
        <property type="entry name" value="SSF51679"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0503">Monooxygenase</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Bac_luciferase" evidence="1">
        <location>
            <begin position="40"/>
            <end position="333"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00296"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ66809.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="384" mass="42608" checksum="75F05850DF4F88C3" modified="2015-12-09" version="1">MTVVPVTSPDLDAAEVSWFAALCSDDYQFLGVPEGHLRSSWEHCSSIVKTAEAQGFRNILCPSSYQVGQDTLSFVAGCAPITDKINLLAAVRCGEMQPIMLARTIATLDHMLEGRLTVNIISSNFPGEEADSGYRYQRSREVVEILKQAWTQDEINYEGQIYNFKGLTTDPARPYQTGGPLLYFGGYSPDALDLCGQHCDVYLMWPEKIEELEGRMKAVHAVAEKYDRTLDYGLRVHMIVRDTEKEAQEYADYIVSKLDDDQGTAIRERALDAKSLGVSHQSKNREIADQFGYIEPNLWTGVGRARSGCGAALVGSTDQVMSKIEAYQKMGIRAFIFSGYPHEEEAKHFGARVMPNLKTCSLPEAYGRVPAEPPATPLGNGVRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZW60</accession>
    <name>A0A0M6ZW60_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">HTH-type transcriptional regulator GltC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">gltC_3</name>
        <name evidence="3" type="ORF">LAX5112_00993</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66507.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670900.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ66507">
        <property type="protein sequence ID" value="CTQ66507"/>
        <property type="gene ID" value="LAX5112_00993"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="10"/>
            <end position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ66507.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="327" mass="36278" checksum="389052DB9784A7C8" modified="2015-12-09" version="1">MPRSSARKDLTLKALELFQICARKSSVQATADETGLSISTVSHHLRSLEEHLGVELFDHARRPMMLTPKGQMFLKEIDVALGSIRKATAEASAGNVTETSYLRFGSIADMDSDITPDLAVYLSRKMPQCNFVFRSGSSRELLDMLRDRQLDIGIATTPPEGVNNLQDTPLLRDPFVVVLPEGRTEETADVMAGKSDLPFLQFTSDLLIARQIEAQLRRLGVALPDRFECGNNQTLMAMVAAGAGWTITTPLLFSRARRFHSKLRMHQFPGKSFARTLSLITTPDCAGSVRGLIDQKLRKLLTHHALTPMHQSNAWLEDRFCLVTGAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWJ4</accession>
    <name>A0A0M6ZWJ4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Bifunctional protein PaaZ</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">paaZ_1</name>
        <name evidence="5" type="ORF">LAX5112_00794</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ65894.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00794"/>
    <dbReference type="EnsemblBacteria" id="CTQ65894">
        <property type="protein sequence ID" value="CTQ65894"/>
        <property type="gene ID" value="LAX5112_00794"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016620">
        <property type="term" value="F:oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.309.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.605.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016161">
        <property type="entry name" value="Ald_DH/histidinol_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016163">
        <property type="entry name" value="Ald_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016162">
        <property type="entry name" value="Ald_DH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015590">
        <property type="entry name" value="Aldehyde_DH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029069">
        <property type="entry name" value="HotDog_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002539">
        <property type="entry name" value="MaoC-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011966">
        <property type="entry name" value="PaaN-DH"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00171">
        <property type="entry name" value="Aldedh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01575">
        <property type="entry name" value="MaoC_dehydratas"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53720">
        <property type="entry name" value="SSF53720"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54637">
        <property type="entry name" value="SSF54637"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02278">
        <property type="entry name" value="PaaN-DH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aldedh" evidence="3">
        <location>
            <begin position="18"/>
            <end position="508"/>
        </location>
    </feature>
    <feature type="domain" description="MaoC-like" evidence="4">
        <location>
            <begin position="546"/>
            <end position="656"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="467"/>
            <end position="491"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF01575"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ65894.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="686" mass="73498" checksum="E303890F254576B6" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZWZ6</accession>
    <name>A0A0M6ZWZ6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Bacterial regulatory proteins, luxR family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01311</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67288.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008193808.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67288">
        <property type="protein sequence ID" value="CTQ67288"/>
        <property type="gene ID" value="LAX5112_01311"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016032">
        <property type="entry name" value="Sig_transdc_resp-reg_C-effctor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000792">
        <property type="entry name" value="Tscrpt_reg_LuxR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00196">
        <property type="entry name" value="GerE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00421">
        <property type="entry name" value="HTH_LUXR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46894">
        <property type="entry name" value="SSF46894"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH luxR-type" evidence="2">
        <location>
            <begin position="317"/>
            <end position="374"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00421"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ67288.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="387" mass="42738" checksum="17BB627573E196DB" modified="2015-12-09" version="1">MSVTVEQFANLSNLVIAAAMEPRRWQDVADALGRAVGPQVCTQIIGYDTHTNSAPLAVASGYDPDILKLYQEHYQLQNPYAVRFDDMRVGDVVPAAHLCNPNDMIRTAFYSDLLRPMEDIYCGGGTLLFREKGRAFVFGGNMRAKDQDRYEDTWLTLCANIAPVMRQSLEVNRMISGLSFENWALRQHNLGSQTALVLIDPNCRIHYASAEAERLLQLGEVMKTGLSGKLRFACEEVHHAIALQTGSQTARCGSAVRSLAFETEQGNRWICQSAGVDLSKLDWAPFGKVFNQQGPALLIALRQETCRVDVNKMIQNALGLSEMEADTALYLAEGMTAAEIAESREVSIHTVRNQIKAALSKCGCRRQADLVMAVDRLRTAGAHTSPL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXD2</accession>
    <name>A0A0M6ZXD2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Extracytoplasmic solute receptor protein YiaO</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">yiaO_2</name>
        <name evidence="4" type="ORF">LAX5112_01106</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the bacterial solute-binding protein 7 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66822.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670970.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01106"/>
    <dbReference type="EnsemblBacteria" id="CTQ66822">
        <property type="protein sequence ID" value="CTQ66822"/>
        <property type="gene ID" value="LAX5112_01106"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071702">
        <property type="term" value="P:organic substance transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.190.170">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018389">
        <property type="entry name" value="DctP_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038404">
        <property type="entry name" value="TRAP_DctP_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33376">
        <property type="entry name" value="PTHR33376"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03480">
        <property type="entry name" value="DctP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0675">Receptor</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809345" evidence="3">
        <location>
            <begin position="25"/>
            <end position="352"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ66822.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="352" mass="37826" checksum="030136242435A96A" modified="2015-12-09" version="1">MLKSALKSLTVAAMLAGSALSATAADYTLRATANSNENDEDYDGLVVFKNFVEAASNGAIEVELFIGTQLCSNGAECLQGVAGGAIDVYISTSGGASGIFPYVQVLDLPYMMSDDRIAEHVLSGDFTRTMRNMALEDSDNMIRLMTIGNTGGWRNFANTKRRIAAPADMEGLKIRTVVADLPQVLVKALGASPTPIPWPELFTSFQTGVVEGSKNGITDIMGMKFPDAGLQYVTLDGHAYMGALWWMNNEKFLSMPEDMRRVVVDGFYALQQATFASPKRKSIQAYEDFVAGGGDLYVPTPAEKAAFKEAASPVFDWFKENVDRGGEIFGALEEAVAAAEADVNGARDADLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZXI6</accession>
    <name>A0A0M6ZXI6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">2-dehydro-3-deoxygluconokinase</fullName>
            <ecNumber evidence="4">2.7.1.45</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">kdgK_2</name>
        <name evidence="4" type="ORF">LAX5112_00929</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.7.1.45" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000003">
        <property type="protein sequence ID" value="CTQ66264.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_00929"/>
    <dbReference type="EnsemblBacteria" id="CTQ66264">
        <property type="protein sequence ID" value="CTQ66264"/>
        <property type="gene ID" value="LAX5112_00929"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008673">
        <property type="term" value="F:2-dehydro-3-deoxygluconokinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1190.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002173">
        <property type="entry name" value="Carboh/pur_kinase_PfkB_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011611">
        <property type="entry name" value="PfkB_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029056">
        <property type="entry name" value="Ribokinase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00294">
        <property type="entry name" value="PfkB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53613">
        <property type="entry name" value="SSF53613"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00584">
        <property type="entry name" value="PFKB_KINASES_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 4" id="KW-0418">Kinase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PfkB" evidence="3">
        <location>
            <begin position="7"/>
            <end position="295"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ66264.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="304" mass="32376" checksum="A6948E54D3534EC6" modified="2015-12-09" version="1">MPSTFLAIGECMVEMAPTGGGTFAKGFAGDTLNTAWYVRKSLSQDWAVSYLTAVGNDQISEEMIAFLDGAGLATDHVQRMTDRTIGLYMIQLKDGERSFAYWRSQSAARCLANDAAALSAAMDAAGLIYFSGITLAILSPEGRQTFLSSLAAARRKGAKAAFDPNLRPRLWEDAQTMRDCVTEAAGLCDFLMPSFEDEEAHFSDASPSESADRYLKAGAAMIVVKNGPQEVIVATENDRRSFRPEPVRSVVDTTAAGDSFNAAFLAEYIVSGDVDASVAAGARLAGTVIQHRGALVDLSSGLVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYB2</accession>
    <name>A0A0M6ZYB2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glyoxalase-like domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01307</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67281.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671226.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01307"/>
    <dbReference type="EnsemblBacteria" id="CTQ67281">
        <property type="protein sequence ID" value="CTQ67281"/>
        <property type="gene ID" value="LAX5112_01307"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.180.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029068">
        <property type="entry name" value="Glyas_Bleomycin-R_OHBP_Dase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004360">
        <property type="entry name" value="Glyas_Fos-R_dOase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037523">
        <property type="entry name" value="VOC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00903">
        <property type="entry name" value="Glyoxalase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54593">
        <property type="entry name" value="SSF54593"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51819">
        <property type="entry name" value="VOC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="VOC" evidence="1">
        <location>
            <begin position="5"/>
            <end position="127"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51819"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67281.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="129" mass="14224" checksum="133AFF449216A251" modified="2015-12-09" version="1">MSGAFLEHVNVTVSDPEATAQRLKDWFGWEVRWKGDSLGGGITYHIGNETSYIAAYNPPKETAAMPGESYGIRGGLNHIAVVVDDLDATEALIKAGGYETKNHADYEPGRRFYFDDDDGIEFEVVSYAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZYN5</accession>
    <name>A0A0M6ZYN5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Polyketide cyclase / dehydrase and lipid transport</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01391</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67437.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67437">
        <property type="protein sequence ID" value="CTQ67437"/>
        <property type="gene ID" value="LAX5112_01391"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.530.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023393">
        <property type="entry name" value="START-like_dom_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="25"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67437.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="184" mass="21660" checksum="AB78465C2F505717" modified="2015-12-09" version="1">MDILSLLVGLVFGGIISWAISYHFFSRSHNERNNEFEVLGRVPYEIDTVWEFVSNPGNFHHFLYDRSDEFEQQTIRPGATFVTHTNHNQSYRNYVVEWDPPHRFAWGHLREKWSYRLDLNERTNGTDVTVTRRFRFLTLQELILFKMFHADFGGDNGLTGLTEDTLARLESALHNFGMTRRSAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M6ZZE7</accession>
    <name>A0A0M6ZZE7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Type IV/VI secretion system protein, DotU family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_01136</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ66904.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055670991.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01136"/>
    <dbReference type="EnsemblBacteria" id="CTQ66904">
        <property type="protein sequence ID" value="CTQ66904"/>
        <property type="gene ID" value="LAX5112_01136"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.590">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017732">
        <property type="entry name" value="T4/T6SS_DotU"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038522">
        <property type="entry name" value="T4/T6SS_DotU_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09850">
        <property type="entry name" value="DotU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03349">
        <property type="entry name" value="IV_VI_DotU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="264"/>
            <end position="285"/>
        </location>
    </feature>
    <feature type="domain" description="DotU" evidence="3">
        <location>
            <begin position="87"/>
            <end position="288"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="42"/>
            <end position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF09850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ66904.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="307" mass="33579" checksum="634695785F77EE62" modified="2015-12-09" version="1">MTNDDLDQPTVAQRLSPRARTSMAQGSAGAGDPGDEPTVAFVSQPSVAQPAQQAQPDPSAPASQNGSSVEAATSIVRLFDRIPERVLVRAASPLLLLIAHLRSAIDRADVVSLRREVVAEIDKFEQTAQKEGVEAGDIIAARYVLCATVDETVLMTPWGSRSEWSSNSLLNQFHNETWGGEKFFGILDRIKGDAPRKMPLLVLLHACLMLGFEGRYRVLEGGRDQLEDLRNELSRLIKRNTRIKPDQPLSKVSEGHKGGRKVSILPPIWIIGIIAVSILFIAWAYSDFMLEGEVVPPLSAIEALEVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0C9</accession>
    <name>A0A0M7A0C9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01303</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67273.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671129.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ67273">
        <property type="protein sequence ID" value="CTQ67273"/>
        <property type="gene ID" value="LAX5112_01303"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="38"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="72"/>
            <end position="93"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ67273.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="101" mass="10931" checksum="AE45C64F5FA1047A" modified="2015-12-09" version="1">MMTLSDTWIDLFTLSGLLNPFALLIGIYLGWRADQPVKLWIAGFAAAALSLMFETAVGLLQLPQPISQDAGALAMFPFRFLGGAAAGAVAYWLNRRRRSAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A0G5</accession>
    <name>A0A0M7A0G5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Nitrile hydratase</fullName>
            <ecNumber evidence="3">4.2.1.84</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">nhhA</name>
        <name evidence="8" type="ORF">LAX5112_01324</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>an aliphatic amide = a nitrile + H2O</text>
            <dbReference type="Rhea" id="RHEA:12673"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:18379"/>
            <dbReference type="ChEBI" id="CHEBI:65285"/>
            <dbReference type="EC" id="4.2.1.84"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the nitrile hydratase subunit alpha family.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.84" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000004">
        <property type="protein sequence ID" value="CTQ67313.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671230.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000004.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01324"/>
    <dbReference type="EnsemblBacteria" id="CTQ67313">
        <property type="protein sequence ID" value="CTQ67313"/>
        <property type="gene ID" value="LAX5112_01324"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0080109">
        <property type="term" value="F:indole-3-acetonitrile nitrile hydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046914">
        <property type="term" value="F:transition metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006807">
        <property type="term" value="P:nitrogen compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.330.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036648">
        <property type="entry name" value="CN_Hdrase_a/SCN_Hdrase_g_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004232">
        <property type="entry name" value="CN_Hdrtase_a/SCN_Hdrlase_g"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023900">
        <property type="entry name" value="CN_Hdrtase_asu/SCN_Hdrlase_gsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018141">
        <property type="entry name" value="Nitrile_hydratase_asu"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02979">
        <property type="entry name" value="NHase_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001426">
        <property type="entry name" value="NHase_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56209">
        <property type="entry name" value="SSF56209"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01323">
        <property type="entry name" value="nitrile_alph"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0408">Iron</keyword>
    <keyword evidence="5 8" id="KW-0456">Lyase</keyword>
    <keyword evidence="4 6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NHase_alpha" evidence="7">
        <location>
            <begin position="18"/>
            <end position="199"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="110"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="113"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="114"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="115"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001410"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00013079"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR001426-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF02979"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ67313.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="212" mass="23737" checksum="D357F0C27F9E62B8" modified="2015-12-09" version="1">MAHNHDHDHDHDHSELSEIELRVRALETLLTEKGYVDPPALDELIETYETKIGPKNGAQVVARAWSDPAYLERLRADATDAIAEFGFTGRQGEHMIVVENTANTHNMVVCTLCSCYPWTVLGLPPVWYKSAPYRSRAVRDPRGVLQEFGVSLPETKDIRVWDSTAEIRYLVIPERPSGTDGWSEEQLAELVTRDSMIGTGLALQPSQLEAAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1K3</accession>
    <name>A0A0M7A1K3_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Probable membrane transporter protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">LAX5112_01654</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the 4-toluene sulfonate uptake permease (TSUP) (TC 2.A.102) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68150.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671420.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01654"/>
    <dbReference type="EnsemblBacteria" id="CTQ68150">
        <property type="protein sequence ID" value="CTQ68150"/>
        <property type="gene ID" value="LAX5112_01654"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002781">
        <property type="entry name" value="TM_pro_TauE-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01925">
        <property type="entry name" value="TauE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="76"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="103"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="132"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="158"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="189"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="231"/>
            <end position="249"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363041"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ68150.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="261" mass="26778" checksum="6F62CE244F3014C5" modified="2015-12-09" version="1">MAEVAFDILLLLFVAAFIAGFIDSIACGGGLIAIPALLMAGLPPLETLGTAKLQALFGSGSATLAYSRRGLVNYKVILPMAGLSAAGAVCGALVATILPTDVLQTALPVVLIVIAVYFALKPNVGAVEQVPRMTSFAFGATVVPAIGFYDGIFGPGTGSFFMLAFVALMGAGLLKATAHTKVLNFASNLAGFLVFMVSGVVFWKIGLLMGVGQFLGAQAGSKLAMKNGAKIIRPLLVCSCIAMAVKLLLDPANPVRIMLAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A1Y4</accession>
    <name>A0A0M7A1Y4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">RNA polymerase sigma factor</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_01807</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68611.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671529.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01807"/>
    <dbReference type="EnsemblBacteria" id="CTQ68611">
        <property type="protein sequence ID" value="CTQ68611"/>
        <property type="gene ID" value="LAX5112_01807"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016987">
        <property type="term" value="F:sigma factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006352">
        <property type="term" value="P:DNA-templated transcription, initiation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050896">
        <property type="term" value="P:response to stimulus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014284">
        <property type="entry name" value="RNA_pol_sigma-70_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007627">
        <property type="entry name" value="RNA_pol_sigma70_r2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013249">
        <property type="entry name" value="RNA_pol_sigma70_r4_t2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013325">
        <property type="entry name" value="RNA_pol_sigma_r2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013324">
        <property type="entry name" value="RNA_pol_sigma_r3/r4-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04542">
        <property type="entry name" value="Sigma70_r2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08281">
        <property type="entry name" value="Sigma70_r4_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88659">
        <property type="entry name" value="SSF88659"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88946">
        <property type="entry name" value="SSF88946"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02937">
        <property type="entry name" value="sigma70-ECF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Sigma70_r2" evidence="1">
        <location>
            <begin position="20"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="domain" description="Sigma70_r4_2" evidence="2">
        <location>
            <begin position="117"/>
            <end position="168"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04542"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF08281"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ68611.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="412" mass="45621" checksum="AB7EFB54E83333AF" modified="2015-12-09" version="1">MTASASNAIAVTKVLGGLARDERGRLLSILIGKFRDFQLAEDVLQDAMVSAVSHWGRNGLPKSPQAWLLKVAYRKAIDRIRRKQTVDRAETDLFMMMDEVSGLEENEDIPDERLRLIFTCCHPVLETKSRMALTLRTLGGLTTGEIARAFLDRETTMGQRLSRAKAKLGGAGISYEVPGPEQWAERLDAVLGVVYLIFTTGLSAPEDDQRGLAHEAIFLCNILNKLRPDDPEIEGCLALLTLNYARRAARFDGEGARVAFLDQDRALWKSSELQDGISLVETALARRKLGPYQIKAAIAACHCEGASPDWAQILLLYDELLVFEPTDVVRLNRAVALAEIGALHEALELIAVLEPDLSDYQPLYAAKAELLYRAGNLGKAHSVYAKAITLAQAKADRLFLEHRARRCVREQS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A257</accession>
    <name>A0A0M7A257_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Glutathione S-transferase GST-6.0</fullName>
            <ecNumber evidence="3">2.5.1.18</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">gstB_2</name>
        <name evidence="3" type="ORF">LAX5112_01842</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.5.1.18" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68681.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01842"/>
    <dbReference type="EnsemblBacteria" id="CTQ68681">
        <property type="protein sequence ID" value="CTQ68681"/>
        <property type="gene ID" value="LAX5112_01842"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004364">
        <property type="term" value="F:glutathione transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006749">
        <property type="term" value="P:glutathione metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010987">
        <property type="entry name" value="Glutathione-S-Trfase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036282">
        <property type="entry name" value="Glutathione-S-Trfase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040079">
        <property type="entry name" value="Glutathione_S-Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004045">
        <property type="entry name" value="Glutathione_S-Trfase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02798">
        <property type="entry name" value="GST_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00019">
        <property type="entry name" value="Glutathione_Transferase_(cytos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47616">
        <property type="entry name" value="SSF47616"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50405">
        <property type="entry name" value="GST_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50404">
        <property type="entry name" value="GST_NTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="GST N-terminal" evidence="1">
        <location>
            <begin position="19"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="domain" description="GST C-terminal" evidence="2">
        <location>
            <begin position="106"/>
            <end position="220"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50404"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50405"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ68681.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="235" mass="25962" checksum="CF258C1783591819" modified="2015-12-09" version="1">MARIGQLAAPDQRGPAMTDHKLVFHYAPRSRASTLRILLDELGANYELKVHNAKAGDLQSPEYLKINPLGKVPALQDGETLITESIAIALHVADLYPEAGLTPGLTDPRRGAYLRWMLFYAASFEPAVVNKAFDTDIPRQIAPYCTYDAVMKTLAAQLEKAPHILGDQISAADIFWGSALRWTLMFDLVPDWPVFTEYAERITARPSFQRVLENEAVLDAEQEAAANPARIDAAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2V5</accession>
    <name>A0A0M7A2V5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Cyclic di-GMP phosphodiesterase Gmr</fullName>
            <ecNumber evidence="4">3.1.4.52</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">gmr_8</name>
        <name evidence="4" type="ORF">LAX5112_01871</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.1.4.52" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68746.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671572.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01871"/>
    <dbReference type="EnsemblBacteria" id="CTQ68746">
        <property type="protein sequence ID" value="CTQ68746"/>
        <property type="gene ID" value="LAX5112_01871"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071111">
        <property type="term" value="F:cyclic-guanylate-specific phosphodiesterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd01948">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01949">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.450">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001633">
        <property type="entry name" value="EAL_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035919">
        <property type="entry name" value="EAL_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000160">
        <property type="entry name" value="GGDEF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00563">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00990">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00052">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00267">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141868">
        <property type="entry name" value="SSF141868"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00254">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50883">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50887">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="265"/>
            <end position="288"/>
        </location>
    </feature>
    <feature type="domain" description="GGDEF" evidence="3">
        <location>
            <begin position="381"/>
            <end position="524"/>
        </location>
    </feature>
    <feature type="domain" description="EAL" evidence="2">
        <location>
            <begin position="531"/>
            <end position="784"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ68746.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="802" mass="88851" checksum="1DC70080231B02EE" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A2Z7</accession>
    <name>A0A0M7A2Z7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative FAD-linked oxidoreductase</fullName>
            <ecNumber evidence="2">1.-.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_01633</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.-.-.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68094.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671403.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01633"/>
    <dbReference type="EnsemblBacteria" id="CTQ68094">
        <property type="protein sequence ID" value="CTQ68094"/>
        <property type="gene ID" value="LAX5112_01633"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071949">
        <property type="term" value="F:FAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.45.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.465.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016166">
        <property type="entry name" value="FAD-bd_PCMH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036318">
        <property type="entry name" value="FAD-bd_PCMH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016169">
        <property type="entry name" value="FAD-bd_PCMH_sub2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016164">
        <property type="entry name" value="FAD-linked_Oxase-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004113">
        <property type="entry name" value="FAD-linked_oxidase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006094">
        <property type="entry name" value="Oxid_FAD_bind_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016171">
        <property type="entry name" value="Vanillyl_alc_oxidase_C-sub2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02913">
        <property type="entry name" value="FAD-oxidase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01565">
        <property type="entry name" value="FAD_binding_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55103">
        <property type="entry name" value="SSF55103"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56176">
        <property type="entry name" value="SSF56176"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51387">
        <property type="entry name" value="FAD_PCMH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FAD-binding PCMH-type" evidence="1">
        <location>
            <begin position="53"/>
            <end position="230"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51387"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ68094.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="472" mass="50078" checksum="542FA6BC78F00C7D" modified="2015-12-09" version="1">MPELAGAAQTLENSTGSAGVEGLVSALKDRFGERCATSAALREQHGHTTTWIETQPPDAVVFAQTTQEVSDIVKLCAAAKVPVIPFGTGTSLEGHVNAPHGGISIDVSQMNRILDVHPEDLDCVVEAGVTRKQLNSYLRDTGLFFPIDPGADASIGGMVATRASGTNAVRYGTMKDAVVALTIVMPDGSIVHTGGRAKKSSAGYDLTRLMVGSEGTLGIITEITLRLHGQPEAISGGVCPFPDVQTACNAVISTIQMGLPVARIELLDSLQVRACNNYSKLDLAETPTLFLEFHGSEAGVKEQSEMFSAIAEELGGGPFKWATAAEERTRLWTARHDAYWAGKSLKPDADIMVTDVCVPISRLADCVQATADDIQAEGLLAPIVGHVGDGNFHVQVLVDMDDADAVRRGKDFVERLSLRAIDMGGTCTGEHGVGQGKRKYMEREHGNALGLMKAIKLALDPDNIMNPGKILP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="24" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A324</accession>
    <name>A0A0M7A324_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Gcv operon activator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">gcvA_9</name>
        <name evidence="3" type="ORF">LAX5112_02124</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69465.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671783.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02124"/>
    <dbReference type="EnsemblBacteria" id="CTQ69465">
        <property type="protein sequence ID" value="CTQ69465"/>
        <property type="gene ID" value="LAX5112_02124"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00039">
        <property type="entry name" value="HTHLYSR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="12"/>
            <end position="69"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ69465.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="319" mass="34346" checksum="5694883D25A87906" modified="2015-12-09" version="1">MKAAIMPLSRLPSLSSLRAFEAAARRGSFKAAATELHVTAGAVSQQIKGLEADLGVILFTRKIRAVHLTPHGQALQPVLSDAFLAIRQAVDAIRPGKTPPRLRINSSGPIIGKWLLPRLHRFTELRPDIFVNIETEGGVNAMTEDGPDIVIRYAHAAPSDLHSIKLHTELLIPVASPQLLAARGIRSPDDLHKAPILHVANPMRKRQRPAWARWSNVAGLADQSTRQDSVMFQPLAADQVVDAAASGVGIALAQSLLAHGALSDGRLTCPFGPVIPSGLSYYLCCRPGRETVPDIAAFFDWAMHEAAVLTTLNALHSES</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3F1</accession>
    <name>A0A0M7A3F1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 12">Flagellar biosynthetic protein FliP</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">fliP_1</name>
        <name evidence="12" type="synonym">fliP</name>
        <name evidence="13" type="ORF">LAX5112_01670</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="12">Plays a role in the flagellum-specific transport system.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="12">Cell membrane</location>
            <topology evidence="12">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="12">Bacterial flagellum basal body</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 12">Belongs to the FliP/MopC/SpaP family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000005">
        <property type="protein sequence ID" value="CTQ68194.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671431.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000005.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01670"/>
    <dbReference type="EnsemblBacteria" id="CTQ68194">
        <property type="protein sequence ID" value="CTQ68194"/>
        <property type="gene ID" value="LAX5112_01670"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009425">
        <property type="term" value="C:bacterial-type flagellum basal body"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044781">
        <property type="term" value="P:bacterial-type flagellum organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009306">
        <property type="term" value="P:protein secretion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005837">
        <property type="entry name" value="FliP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005838">
        <property type="entry name" value="T3SS_IM_P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006311">
        <property type="entry name" value="TAT_signal"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30587">
        <property type="entry name" value="PTHR30587"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30587:SF0">
        <property type="entry name" value="PTHR30587:SF0"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00813">
        <property type="entry name" value="FliP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00951">
        <property type="entry name" value="FLGBIOSNFLIP"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01302">
        <property type="entry name" value="TYPE3IMPPROT"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01103">
        <property type="entry name" value="fliP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01060">
        <property type="entry name" value="FLIP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01061">
        <property type="entry name" value="FLIP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0975">Bacterial flagellum</keyword>
    <keyword evidence="7 12" id="KW-1005">Bacterial flagellum biogenesis</keyword>
    <keyword evidence="11 12" id="KW-1006">Bacterial flagellum protein export</keyword>
    <keyword evidence="5 12" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="13" id="KW-0966">Cell projection</keyword>
    <keyword evidence="13" id="KW-0969">Cilium</keyword>
    <keyword evidence="13" id="KW-0282">Flagellum</keyword>
    <keyword evidence="9 12" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-0653">Protein transport</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8 12" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4 12" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="53"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="95"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="196"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="228"/>
            <end position="249"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006257"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00021714"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022795"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023143"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023225"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU362069"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="CTQ68194.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="255" mass="27877" checksum="EDE4C7918D8E17BC" modified="2015-12-09" version="1">MTGRISRIHWLKNLTAGIAFAMGAIALTLPAHAQEISVGFGDDANLTERAVQLVILLTVLSLAPSILVMVTSFTRIVVVLSLLRSAIGLQTAPPNMVMVSLALFLSAFIMMPTLQAAYDVGVQPLIDGDIEIDQAYERASEPFRDFMLSQVREKDLMLFQELSGRDAPETPEDLEMAVLIPAFMISELRRAFEIGFLLYLPFLIIDLVIASVLMSMGMMMLPPVVISLPFKLIFFVLVDGWNLVAGSLVKSFGGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3S0</accession>
    <name>A0A0M7A3S0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Inner membrane protein YbhL</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">ybhL</name>
        <name evidence="6" type="ORF">LAX5112_02225</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the BI1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69725.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008193278.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02225"/>
    <dbReference type="EnsemblBacteria" id="CTQ69725">
        <property type="protein sequence ID" value="CTQ69725"/>
        <property type="gene ID" value="LAX5112_02225"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006214">
        <property type="entry name" value="Bax_inhibitor_1-related"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23291">
        <property type="entry name" value="PTHR23291"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01027">
        <property type="entry name" value="Bax1-I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="34"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="75"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="109"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="134"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="165"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="189"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="235"/>
            <end position="251"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU004379"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ69725.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="254" mass="27403" checksum="5D26D408A21F1859" modified="2015-12-09" version="1">MSTFDRQSQGAYSVAGARAEAGIDQGLRAYMLGVYNYMTFGLALTGFFAIGTYMMSVVTNDAGSIVGLTPLGNAIFASPLKWVVMLAPLGMVLWLSFRIQSMSASTARTMFLIYSALMGVSLSSIFMVYTGGSIARVFFITAASFGALSIFGYTTKKDLSAWGSFLFMGLIGIVIASLVNIFLGSSALQFAISVVGVLVFAGLTAYDTQQIKEMYYEGDSGEVATKKSVMGALRLYLDFINMFLMLLQLFGNRE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3V7</accession>
    <name>A0A0M7A3V7_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 5">30S ribosomal protein S19</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 7" type="primary">rpsS</name>
        <name evidence="7" type="ORF">LAX5112_01730</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 5 6">Belongs to the universal ribosomal protein uS19 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68413.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008194920.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01730"/>
    <dbReference type="EnsemblBacteria" id="CTQ68413">
        <property type="protein sequence ID" value="CTQ68413"/>
        <property type="gene ID" value="LAX5112_01730"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015935">
        <property type="term" value="C:small ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.860.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00531">
        <property type="entry name" value="Ribosomal_S19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020934">
        <property type="entry name" value="Ribosomal_S15/S19_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002222">
        <property type="entry name" value="Ribosomal_S19"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005732">
        <property type="entry name" value="Ribosomal_S19_bac-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023575">
        <property type="entry name" value="Ribosomal_S19_S15_SF"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11880">
        <property type="entry name" value="PTHR11880"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00203">
        <property type="entry name" value="Ribosomal_S19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002144">
        <property type="entry name" value="Ribosomal_S19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00975">
        <property type="entry name" value="RIBOSOMALS19"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54570">
        <property type="entry name" value="SSF54570"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01050">
        <property type="entry name" value="rpsS_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00323">
        <property type="entry name" value="RIBOSOMAL_S19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5 6" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3 5 6" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="5" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="5" id="KW-0699">rRNA-binding</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007345"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00015696"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00531"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ68413.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="92" mass="10513" checksum="7C58C7B3F17DCB75" modified="2015-12-09" version="1">MARSIWKGPFVDGYLLKKAEKVREAGRNEVIKTWSRRSTILPQFVGLTFGVYNGQKHVPVQVSEEMIGHKFGEFSPSRTYYGHGADKKAKRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A3Y2</accession>
    <name>A0A0M7A3Y2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Auxin efflux carrier</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">LAX5112_02238</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the auxin efflux carrier (TC 2.A.69) family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69758.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671867.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02238"/>
    <dbReference type="EnsemblBacteria" id="CTQ69758">
        <property type="protein sequence ID" value="CTQ69758"/>
        <property type="gene ID" value="LAX5112_02238"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1530.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004776">
        <property type="entry name" value="Mem_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038770">
        <property type="entry name" value="Na+/solute_symporter_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03547">
        <property type="entry name" value="Mem_trans"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="6"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="35"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="66"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="97"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="126"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="173"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="203"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="235"/>
            <end position="256"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="262"/>
            <end position="282"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="294"/>
            <end position="314"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010145"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ69758.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="321" mass="33991" checksum="D8CDB53EFA7470EB" modified="2015-12-09" version="1">MFVQTLTIVAPVFLLIGFGYGLARTKILSMKVSEALGEFVYVVAIPILIFRTLVTADLSAGLPWALWASYFLGIACAWALGTLVIRKGFGRDARAGAIGAISAAFANTILVGLPLIAAVYGDDGLVPLLLIVSIHLAFMTVLMAIVMERAAAHDSGGKSPPVLTLIKSAAKSLIRNPLVITIIAAFCWRLTGFEMPSLASDLLNRIGATALPLALISLGMSLVQYGMRGNILPGLLLSAIKIVIMPATVFSLGYFVFNLPPLWVAVSTLTAACPTGINAYVFANKYGTGHAMSANAITVTTALAVLTTSLWIWFLEYVLSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4G3</accession>
    <name>A0A0M7A4G3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Farnesyl diphosphate synthase</fullName>
            <ecNumber evidence="3">2.5.1.10</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02072</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the FPP/GGPP synthase family.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.10" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69326.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671746.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02072"/>
    <dbReference type="EnsemblBacteria" id="CTQ69326">
        <property type="protein sequence ID" value="CTQ69326"/>
        <property type="gene ID" value="LAX5112_02072"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004337">
        <property type="term" value="F:geranyltranstransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008299">
        <property type="term" value="P:isoprenoid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00685">
        <property type="entry name" value="Trans_IPPS_HT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.600.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008949">
        <property type="entry name" value="Isoprenoid_synthase_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000092">
        <property type="entry name" value="Polyprenyl_synt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033749">
        <property type="entry name" value="Polyprenyl_synt_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00348">
        <property type="entry name" value="polyprenyl_synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48576">
        <property type="entry name" value="SSF48576"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00723">
        <property type="entry name" value="POLYPRENYL_SYNTHASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00444">
        <property type="entry name" value="POLYPRENYL_SYNTHASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0460">Magnesium</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU004466"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ69326.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="301" mass="32226" checksum="84890B4FB1DB3D14" modified="2015-12-09" version="1">MTFDLKSHLAAQAGRIETALTSLLKETERDGEISRPERLINAMRHGALNGGKRLRPVLVMDAAGLFGRADDGVVQAGCALELIHCYSLVHDDLPAMDDDDLRRGQPTVHKAYDDATAILAGDALLTLAFDVITDEAVHPEAGIRLRLCRELARASGIGGMAGGQMLDLESEHRDRSEAEIRHLQSMKTGALLRYACRAGAILSDASDADVERLTRFGEIIGLAFQLADDLLDVEASPEAMGKATGKDAEAGKATLVGLMGIDRTRAELQALLEEAHDLMAPYGSKAAALNALADYVVTRSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4R3</accession>
    <name>A0A0M7A4R3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">SET domain protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">LAX5112_01808</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000006">
        <property type="protein sequence ID" value="CTQ68614.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671530.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000006.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_01808"/>
    <dbReference type="EnsemblBacteria" id="CTQ68614">
        <property type="protein sequence ID" value="CTQ68614"/>
        <property type="gene ID" value="LAX5112_01808"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.170.270.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003616">
        <property type="entry name" value="Post-SET_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001214">
        <property type="entry name" value="SET_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046341">
        <property type="entry name" value="SET_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00856">
        <property type="entry name" value="SET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00317">
        <property type="entry name" value="SET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82199">
        <property type="entry name" value="SSF82199"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50868">
        <property type="entry name" value="POST_SET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50280">
        <property type="entry name" value="SET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="SET" evidence="4">
        <location>
            <begin position="8"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="domain" description="Post-SET" evidence="5">
        <location>
            <begin position="122"/>
            <end position="138"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50280"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50868"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ68614.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="164" mass="18428" checksum="489346E86E1FB642" modified="2015-12-09" version="1">MTMTWFSPKVEKRSSGIEGRGLFAIAPITKGELVVVKGGHVFDRARRDELAKSLGPAEIQIGDDLFIGPVSADERESSMMHLNHSCAPNLGIRGQIAFHAMRHIKDGEEFSFDYATGDDDDWEMECACGTDRCRGLITGRDWRRAELQVRYAGWFSDYLARKIT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A4V0</accession>
    <name>A0A0M7A4V0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 10">Cytochrome c oxidase assembly protein CtaG</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10 12" type="primary">ctaG</name>
        <name evidence="12" type="ORF">LAX5112_02361</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 10">Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 10">Cell inner membrane</location>
            <topology evidence="2 10">Single-pass type II membrane protein</topology>
            <orientation evidence="2 10">Periplasmic side</orientation>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 10">Belongs to the COX11/CtaG family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70108.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671980.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02361"/>
    <dbReference type="EnsemblBacteria" id="CTQ70108">
        <property type="protein sequence ID" value="CTQ70108"/>
        <property type="gene ID" value="LAX5112_02361"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005507">
        <property type="term" value="F:copper ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008535">
        <property type="term" value="P:respiratory chain complex IV assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.370.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00155">
        <property type="entry name" value="CtaG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023471">
        <property type="entry name" value="CtaG/Cox11_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007533">
        <property type="entry name" value="Cyt_c_oxidase_assmbl_CtaG"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04442">
        <property type="entry name" value="CtaG_Cox11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005413">
        <property type="entry name" value="COX11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF110111">
        <property type="entry name" value="SSF110111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="10" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8 10" id="KW-0186">Copper</keyword>
    <keyword evidence="9 10 11" id="KW-0472">Membrane</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 10" id="KW-0735">Signal-anchor</keyword>
    <keyword evidence="5 10 11" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 10 11" id="KW-1133">Transmembrane helix</keyword>
    <feature type="topological domain" description="Cytoplasmic" evidence="10">
        <location>
            <begin position="1"/>
            <end position="12"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="17"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="topological domain" description="Periplasmic" evidence="10">
        <location>
            <begin position="36"/>
            <end position="201"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009620"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00015384"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ70108.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="201" mass="22101" checksum="7AF1668779DBB247" modified="2015-12-09" version="1">MTEANDQNNLSRSNRKVAFACLGMFSFMIAAAYAAVPLYDLFCRVTGFGGTTQVAEQESEMVIDRVITVRFDGNVNHALPWDFKPAQRSVTLKMGETAQLPYIAANVSDGRTVGTSTFNVTPTSAGVYFNKLDCFCFTEQALEPGESVEMPVVFFVDPAMDKDPMLEHVKEITLSYTFFPVEQPEQPVAARADSPAAETNL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A524</accession>
    <name>A0A0M7A524_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02395</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70178.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672011.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70178">
        <property type="protein sequence ID" value="CTQ70178"/>
        <property type="gene ID" value="LAX5112_02395"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ70178.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="224" mass="25489" checksum="3E69898A277490D0" modified="2015-12-09" version="1">MQTWAGLTRLLVFVSISLFGFAAWGLTLLEPDRQSYLETFDTTELETVLEGQIMSPGRHSPWSISVDGANLVWRNTSKKTNSQHQSIDWVRFEDNKEITRLNKASLSVTVLPRRFNSGGAGIVAGTLRQRQDWRFNIDKNGGYHVLRKSGRGFARVYKGEHPAIKPNTPNVIAFERQGEEFVFFVNEQEIIRLPTNARRSDPHWVGLTAFGIGTYRFAEMTITQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A595</accession>
    <name>A0A0M7A595_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">luxQ_1</name>
        <name evidence="7" type="ORF">LAX5112_02239</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69761.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02239"/>
    <dbReference type="EnsemblBacteria" id="CTQ69761">
        <property type="protein sequence ID" value="CTQ69761"/>
        <property type="gene ID" value="LAX5112_02239"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7" id="KW-0418">Kinase</keyword>
    <keyword evidence="3 4" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Histidine kinase" evidence="5">
        <location>
            <begin position="13"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="domain" description="Response regulatory" evidence="6">
        <location>
            <begin position="268"/>
            <end position="384"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="4">
        <location>
            <position position="317"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ69761.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="392" mass="41768" checksum="2C207A1D3B312EE7" modified="2015-12-09" version="1">MAEYDEDSVNLALLAHDLRTPLGAMRLTAELIETGPLNDAQAEQLSVLMRAIDSLEQMTTELITDAAPGDAGEDAAVSISSLVHDCADLFRVAAEKKGLKLTVRLQDTAGACQTGAAGQLRRAVSALLDNAIKYTERGGISVEVISCPFPEKQLGSTEQSNASTADAYWVSLSITDTGPGIDPTEREDLFRPFVRGRKAQENTSGSGLGLWGIAQTVRQMGGVLNHSSPETGGSRFEVQIPVKPAAPGLKGTKNASKTGVEDNELPDHVLIVDDNETNCRLLAALLESFGVTSDISHSGEDAIKLALEREYGAVLLDLHMPGMGGLEVAQELRKNRPPEELPLIAVTAALEAFGDNLLRKAGFLEGLGKPLAPSALYDVLVRAKQLKSVHWI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A5K0</accession>
    <name>A0A0M7A5K0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">ATP-dependent helicase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02144</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69520.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671799.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02144"/>
    <dbReference type="EnsemblBacteria" id="CTQ69520">
        <property type="protein sequence ID" value="CTQ69520"/>
        <property type="gene ID" value="LAX5112_02144"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004386">
        <property type="term" value="F:helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0347">Helicase</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="1">
        <location>
            <begin position="33"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase C-terminal" evidence="2">
        <location>
            <begin position="249"/>
            <end position="405"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ69520.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="723" mass="79331" checksum="E11BA630FA5AC08B" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6U2</accession>
    <name>A0A0M7A6U2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Adenylate cyclase 1</fullName>
            <ecNumber evidence="3">4.6.1.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">cyaA_11</name>
        <name evidence="3" type="ORF">LAX5112_02397</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="4.6.1.1" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70182.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672014.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02397"/>
    <dbReference type="EnsemblBacteria" id="CTQ70182">
        <property type="protein sequence ID" value="CTQ70182"/>
        <property type="gene ID" value="LAX5112_02397"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004016">
        <property type="term" value="F:adenylate cyclase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009190">
        <property type="term" value="P:cyclic nucleotide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035556">
        <property type="term" value="P:intracellular signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07302">
        <property type="entry name" value="CHD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1230">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001054">
        <property type="entry name" value="A/G_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00211">
        <property type="entry name" value="Guanylate_cyc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00044">
        <property type="entry name" value="CYCc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50125">
        <property type="entry name" value="GUANYLATE_CYCLASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0456">Lyase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="42"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="84"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="domain" description="Guanylate cyclase" evidence="2">
        <location>
            <begin position="159"/>
            <end position="288"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ70182.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="340" mass="37761" checksum="450DB5F7B1CB39A6" modified="2015-12-09" version="1">MFRQWQTRTLKAIAWISLASAIVGMFIGFLRASEETIFTDVSIGMLTGILIGFCCSFSEFFVFSNSRLRMARQMPLWQLMLLRTVVWCGCILAGMSLPIWLFGLPWQDLDTYLIENFVISAAIALAFSSGIELSRLLGPEATSALITGRYARPRLENRVVLFADLIGSTALAERLGELQFHAFLSDVAQDFADPIYKTHGDVHRYVGDAVIVTWPLEKGVKNGASLHCALGMHRILDRRASFYKKKYDTEPRIRVAIHCGQVAAGEIGDWKKEIALLGDTMNTTARIESAARDLGERIVLSDDLVKSLPDTIGTSIRALPAYEAAGKQDKLTLWAVDQHG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A6Y5</accession>
    <name>A0A0M7A6Y5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Acrylyl-CoA reductase AcuI</fullName>
            <ecNumber evidence="2">1.3.1.84</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">acuI</name>
        <name evidence="2" type="ORF">LAX5112_02098</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.3.1.84" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000007">
        <property type="protein sequence ID" value="CTQ69394.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055671763.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000007.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02098"/>
    <dbReference type="EnsemblBacteria" id="CTQ69394">
        <property type="protein sequence ID" value="CTQ69394"/>
        <property type="gene ID" value="LAX5112_02098"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043957">
        <property type="term" value="F:acryloyl-CoA reductase (NADP+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014188">
        <property type="entry name" value="Acrylyl-CoA_reductase_AcuI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013149">
        <property type="entry name" value="ADH-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011032">
        <property type="entry name" value="GroES-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020843">
        <property type="entry name" value="PKS_ER"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43677:SF1">
        <property type="entry name" value="PTHR43677:SF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00107">
        <property type="entry name" value="ADH_zinc_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00829">
        <property type="entry name" value="PKS_ER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50129">
        <property type="entry name" value="SSF50129"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02823">
        <property type="entry name" value="oxido_YhdH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PKS_ER" evidence="1">
        <location>
            <begin position="15"/>
            <end position="326"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ69394.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="330" mass="34843" checksum="81B0FEAAD9DFB11F" modified="2015-12-09" version="1">MTFKALVVDKNEEGKTSAAVKEIDENQLPDGNVTVAVEYSTLNYKDGLCVGPGGGLVKDYPHVPGIDFAGTVEESSDEWYKPGDKVVLTGWRVGEVWWGGYAQKASVKGEWLVPLPDGLTTRDAMAVGTAGFTAMLAVMALEDHGLKPENGPVLVTGAAGGVGSVAVAILANLGYEVHAVTGRESTWAYLKSLGASAIVPRDDVAETIKRPLEKEVWAGAIDAVGGDMLARILGQMKYGCSVATIGLAGGANLPASVIPFILRGVNLLGIDSVMRPYDDRVRAWQRIAKDLPLDKLHGMIQPATLEDLPGLGKDILKGQVKGRVVVDVNA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7H9</accession>
    <name>A0A0M7A7H9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Thiaminase-1</fullName>
            <ecNumber evidence="2">2.5.1.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02401</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.5.1.2" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70190.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672018.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70190">
        <property type="protein sequence ID" value="CTQ70190"/>
        <property type="gene ID" value="LAX5112_02401"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050332">
        <property type="term" value="F:thiamine pyridinylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030901">
        <property type="entry name" value="Thiaminase_BcmE"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR04541">
        <property type="entry name" value="thiaminase_BcmE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809315" evidence="1">
        <location>
            <begin position="28"/>
            <end position="504"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70190.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="504" mass="54153" checksum="78147A3C1FAC65F3" modified="2015-12-09" version="1">MHQKFRNIVILKSALVIGALFSSAASAQNCDAICTDAETCISAAVYPYVPDMGAFTSAICSAWQTAGQTEKLYLIADESVWDGGYDSNPVYTNGSGKQTPIDVFVYDAMYLEYWKTQTAQIPAAQISNPTDFVPYADTALKLPNNNMYALPMLGCTNIMFYRNGDSGMAGVTTLSDFETVNSAGIYISPVPFGMSGAMMNMSGKTTIGVNYMVKGYLDTGNWPSMTHLDPSIVQSLAGIAETASYYNALTGAVPPLQGVEDQYVRAGYFSEGYGRTSIGFSESMSQMSNATRQNLKLRAFPWTDNTNSPNMFYADVAGVNSNSPFLANNGTLPFVLANIMTEQATMQNAIAPQNGQLSYLFPARTSVLNALSSVDPLYQQMSDILNAKTTELVSMPTTDRTAFHSFGGSVQSAVLGDFSGHCDLESTDFPGNNSQAPSICTPLCQSAGGWIGSWTNQSPPAWPGYSACGCNTCIQASPLPQSVQEEEATTMVQSGPALKRYMRN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A7T8</accession>
    <name>A0A0M7A7T8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">LAX5112_02738</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the UPF0283 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71158.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672287.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02738"/>
    <dbReference type="EnsemblBacteria" id="CTQ71158">
        <property type="protein sequence ID" value="CTQ71158"/>
        <property type="gene ID" value="LAX5112_02738"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021147">
        <property type="entry name" value="DUF697"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006507">
        <property type="entry name" value="UPF0283"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR39342">
        <property type="entry name" value="PTHR39342"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05128">
        <property type="entry name" value="DUF697"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01620">
        <property type="entry name" value="hyp_HI0043"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="67"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="97"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="1"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="12"/>
            <end position="26"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008255"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ71158.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="352" mass="37533" checksum="6A7FD2BB0945754F" modified="2015-12-09" version="1">MTDTNTRPPRKPAAFRLDDSKVQLSGDHAEDPSAGHALVTEEVLDEEAPRLPRSASTPKSGSSFGKWLLVGLSGLVSLSIGLAVDSLIRDLFSRTDWLGWLGVALAATAVAGLIGLTARELAGVLRLKRIDDLRERLQTAADTDDAQKAQESLKDLLAIYQDRPETALGRKTLSGHMREIIDGRDLVMLAERDLLQSLDQEARKIVMNSAKRVSIVTAVSPRALVDLLMVLFENVRIIRRLSTLYGGRPGTLGFIRLAKHVLAHLAVTGGMAAGDSLASQVLGHGVAARLSARLGEGVINGILTARIGIAAIAVCRPAPFIATKGPRVSDFMGELLSSAEAETESKNGKTSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A898</accession>
    <name>A0A0M7A898_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02570</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70672.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672163.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02570"/>
    <dbReference type="EnsemblBacteria" id="CTQ70672">
        <property type="protein sequence ID" value="CTQ70672"/>
        <property type="gene ID" value="LAX5112_02570"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019285">
        <property type="entry name" value="DUF2336"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10098">
        <property type="entry name" value="DUF2336"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="350"/>
            <end position="380"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="216"/>
            <end position="243"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="350"/>
            <end position="369"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ70672.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="380" mass="40753" checksum="2274B8D6183453A5" modified="2015-12-09" version="1">MTELAKLADLAKDSSTAGRKSLIATLTEMFLAAGDTRGENAAFLFGDIALKLLGDLEEDSRAELAERVSKDHFAPHQLMLELAKDTHAVAEPVLTNSPVLKSEDLVEIASSASMDHLEAIAERVPIEEAVTSVLVDRGDPSVLSKVAANEGAVIADNSFMTIVDKVGRDEAVQAALIGRPDLPLEVGQVLLPLLTEELQKQVLALGKDNYLAQMLAQASKEKKKNQLESIERAKLQVKALVKDIKSGRQMVDEAVRKFAKAGQATELALLLAGLSDLPPAAVSQLLFSPNDKPLIILCKANNVRAEAYKDILMMRAQRLNIGGMELNEAIQRFGLMSVEGAKRSLEVLRQTSQAAAAKPAGTAGEPSSQSPKKAPFAAHR</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8H5</accession>
    <name>A0A0M7A8H5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">FMN-dependent NADPH-azoreductase</fullName>
            <ecNumber evidence="2">1.7.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">azr_1</name>
        <name evidence="2" type="ORF">LAX5112_02586</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.7.-.-" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70716.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672173.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02586"/>
    <dbReference type="EnsemblBacteria" id="CTQ70716">
        <property type="protein sequence ID" value="CTQ70716"/>
        <property type="gene ID" value="LAX5112_02586"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.360">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014063">
        <property type="entry name" value="Arsenate-R_ArsH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029039">
        <property type="entry name" value="Flavoprotein-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005025">
        <property type="entry name" value="FMN_Rdtase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43590">
        <property type="entry name" value="PTHR43590"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03358">
        <property type="entry name" value="FMN_red"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52218">
        <property type="entry name" value="SSF52218"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02690">
        <property type="entry name" value="resist_ArsH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FMN_red" evidence="1">
        <location>
            <begin position="35"/>
            <end position="178"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03358"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70716.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="231" mass="26028" checksum="6FB71D0E77A4BE4B" modified="2015-12-09" version="1">MFDGKPDDLPNVSFADIRPVSASDVDQPAAFDHPPRILLLYGSLRERSYSRLLVEEAARLLTAFGAETRIFNPSGLPLPDDADVSHPKVAELRDLSIWSEAQVWSSPERHGAMTGILKTQIDWIPLSTGAVRPTQGKTLALMQVSGGSQSFNAVNQMRILGRWMRMVTIPNQSSVPKAYTQFDDDGRMLPSPLYDRMVDVMEELMKFTLLVRGRSDYLVDRYSERKSERQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A8Z6</accession>
    <name>A0A0M7A8Z6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">UDP-2,3-diacylglucosamine hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02712</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the metallophosphoesterase superfamily. YfcE family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71087.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040450827.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02712"/>
    <dbReference type="EnsemblBacteria" id="CTQ71087">
        <property type="protein sequence ID" value="CTQ71087"/>
        <property type="gene ID" value="LAX5112_02712"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.21.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024654">
        <property type="entry name" value="Calcineurin-like_PHP_lpxH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043461">
        <property type="entry name" value="LpxH-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029052">
        <property type="entry name" value="Metallo-depent_PP-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34990">
        <property type="entry name" value="PTHR34990"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12850">
        <property type="entry name" value="Metallophos_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56300">
        <property type="entry name" value="SSF56300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Metallophos_2" evidence="2">
        <location>
            <begin position="12"/>
            <end position="227"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008950"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF12850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ71087.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="267" mass="30138" checksum="BB4599AE2FB7CCE5" modified="2015-12-09" version="1">MSTSETSRHYRALFISDVHLGTRGCQADLLLDFLKDNDAETIYLVGDIADGWRLKRSWYWPQLHNDVVQKILRKGRKGSRIVYIPGNHDEFLRSFLGTHFGGVEVTDSIVHETADNRRYLVIHGDQFDVVIRHAKWLAFFGDKAYVTALGVNTVLNAVRRRLGLTYWSLSAWAKLKVKNAVSFIGRFEEALSDEARRQGVDGVICGHIHHAASRDVNGIHYINTGDWVESCTAVAEHHDGTFEVIRWVEQAQTGAQTEKPQEAPVAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A925</accession>
    <name>A0A0M7A925_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_02664</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ70952.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70952">
        <property type="protein sequence ID" value="CTQ70952"/>
        <property type="gene ID" value="LAX5112_02664"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ70952.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="255" mass="28662" checksum="60F418704EE7B058" modified="2015-12-09" version="1">MYPDRPTPNKPSFLQLFHIAAKCDCLYLLDFYCQLLFSHNRTSHLSEEQQALLAKVAHVDIIAVAAEQNRLLPPRDQLLLCGNEPYFIKPMPIEAVESGLAGDEEKFLFNLWHENKGVIQNDDRLTKLSSKFILTLPEADAGKVPELTFAGRDSTFRRMFPAAISNNRPVVDVLPEKYVAAATDAYHMAIAGEPSFDIQRTGPLLGPKVPNITQQRLVLKFKSSSGFERVFSLIRVLQIHEASDRVKSTALNLEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9F1</accession>
    <name>A0A0M7A9F1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Putative FAD-linked oxidoreductase</fullName>
            <ecNumber evidence="3">1.-.-.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_02482</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="1.-.-.-" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70363.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672069.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02482"/>
    <dbReference type="EnsemblBacteria" id="CTQ70363">
        <property type="protein sequence ID" value="CTQ70363"/>
        <property type="gene ID" value="LAX5112_02482"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071949">
        <property type="term" value="F:FAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.45.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.43.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.465.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016166">
        <property type="entry name" value="FAD-bd_PCMH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036318">
        <property type="entry name" value="FAD-bd_PCMH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016167">
        <property type="entry name" value="FAD-bd_PCMH_sub1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016169">
        <property type="entry name" value="FAD-bd_PCMH_sub2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016164">
        <property type="entry name" value="FAD-linked_Oxase-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004113">
        <property type="entry name" value="FAD-linked_oxidase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006094">
        <property type="entry name" value="Oxid_FAD_bind_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016171">
        <property type="entry name" value="Vanillyl_alc_oxidase_C-sub2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02913">
        <property type="entry name" value="FAD-oxidase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01565">
        <property type="entry name" value="FAD_binding_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55103">
        <property type="entry name" value="SSF55103"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56176">
        <property type="entry name" value="SSF56176"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51387">
        <property type="entry name" value="FAD_PCMH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0274">FAD</keyword>
    <keyword evidence="1" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FAD-binding PCMH-type" evidence="2">
        <location>
            <begin position="37"/>
            <end position="218"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51387"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ70363.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="470" mass="50687" checksum="CA10E8C121263F91" modified="2015-12-09" version="1">MEPSPHAERFAEMIGAANVLTTADDQAPFLTEWRDLYKGATPMVLRPGSTEEVSAVMRYAYENDLKVVPQGGNTGLVGGQIPQESGEEIVLSLTRMNKVRAVDPDGFTLTVESGVILETVQNEAEKVDRLFPLSLGAQGSCQIGGNISTNAGGTAVLAYGNTRDLVLGLEVVLPTGEIWNGLRTLRKDNTGYDLKQLFIGGEGTLGIITAASLKLFPKPKKLEAAFIGLANPYAALKVFSMAKAQAGPLLTGFEIMPHVGVQFCLDHLDGARDPLEGEHAWYVLMELSSGSEVFPVRDLMEGILGEAFEAELVEDAAFAQNLSQVQDFWHIRHGMSEVQKAEGGSIKHDVSVPVASIPAFLDEAIAAVETFVPGCRPVPFGHLGDGNIHFNVSQPVGADKEAYLAKWDEMNAIVHGIVADFGGSISAEHGIGRLKKDLLRDVKSEIELDLMRRIKSAFDPKNLMNPGRIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9H1</accession>
    <name>A0A0M7A9H1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_02489</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70383.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672075.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ70383">
        <property type="protein sequence ID" value="CTQ70383"/>
        <property type="gene ID" value="LAX5112_02489"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="34"/>
            <end position="50"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ70383.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="186" mass="21136" checksum="05CCEE3F204758C8" modified="2015-12-09" version="1">MKEQVVDKEAESRGSEKPAPAPFTIGYDRRNSEAIVYGCMLLAGLFAVVSVVSGMYLLLFAALGPAVIAYWHFPMLEKKRPQLGANEDGLFVDRIGFIDWGAIRMIDLTRTSVRSIELIKLNVLLTRPLEDAVTQGQHTPLWKRLTMRNWKRSKREHGRELISVNLHTLVGDPDEVLTRIRTFKFV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="26" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9U1</accession>
    <name>A0A0M7A9U1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Glucose-6-phosphate isomerase</fullName>
            <shortName evidence="7">GPI</shortName>
            <ecNumber evidence="7">5.3.1.9</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Phosphoglucose isomerase</fullName>
            <shortName evidence="7">PGI</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">Phosphohexose isomerase</fullName>
            <shortName evidence="7">PHI</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7 9" type="primary">pgi</name>
        <name evidence="9" type="ORF">LAX5112_02682</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Catalyzes the reversible isomerization of glucose-6-phosphate to fructose-6-phosphate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6 7 8">
            <text>alpha-D-glucose 6-phosphate = beta-D-fructose 6-phosphate</text>
            <dbReference type="Rhea" id="RHEA:11816"/>
            <dbReference type="ChEBI" id="CHEBI:57634"/>
            <dbReference type="ChEBI" id="CHEBI:58225"/>
            <dbReference type="EC" id="5.3.1.9"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="7">Carbohydrate biosynthesis; gluconeogenesis.</text>
    </comment>
    <comment type="pathway">
        <text evidence="1 7 8">Carbohydrate degradation; glycolysis; D-glyceraldehyde 3-phosphate and glycerone phosphate from D-glucose: step 2/4.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 7 8">Belongs to the GPI family.</text>
    </comment>
    <dbReference type="EC" id="5.3.1.9" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000009">
        <property type="protein sequence ID" value="CTQ71000.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672242.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000009.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02682"/>
    <dbReference type="EnsemblBacteria" id="CTQ71000">
        <property type="protein sequence ID" value="CTQ71000"/>
        <property type="gene ID" value="LAX5112_02682"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00109">
        <property type="reaction ID" value="UER00181"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00138"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0097367">
        <property type="term" value="F:carbohydrate derivative binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004347">
        <property type="term" value="F:glucose-6-phosphate isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006094">
        <property type="term" value="P:gluconeogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006096">
        <property type="term" value="P:glycolytic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd05015">
        <property type="entry name" value="SIS_PGI_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd05016">
        <property type="entry name" value="SIS_PGI_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1390.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00473">
        <property type="entry name" value="G6P_isomerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001672">
        <property type="entry name" value="G6P_Isomerase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023096">
        <property type="entry name" value="G6P_Isomerase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018189">
        <property type="entry name" value="Phosphoglucose_isomerase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046348">
        <property type="entry name" value="SIS_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035476">
        <property type="entry name" value="SIS_PGI_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035482">
        <property type="entry name" value="SIS_PGI_2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11469">
        <property type="entry name" value="PTHR11469"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00342">
        <property type="entry name" value="PGI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00662">
        <property type="entry name" value="G6PISOMERASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53697">
        <property type="entry name" value="SSF53697"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00765">
        <property type="entry name" value="P_GLUCOSE_ISOMERASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00174">
        <property type="entry name" value="P_GLUCOSE_ISOMERASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51463">
        <property type="entry name" value="P_GLUCOSE_ISOMERASE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 7 8" id="KW-0312">Gluconeogenesis</keyword>
    <keyword evidence="4 7 8" id="KW-0324">Glycolysis</keyword>
    <keyword evidence="5 7 8" id="KW-0413">Isomerase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" description="Proton donor" evidence="7">
        <location>
            <position position="348"/>
        </location>
    </feature>
    <feature type="active site" evidence="7">
        <location>
            <position position="379"/>
        </location>
    </feature>
    <feature type="active site" evidence="7">
        <location>
            <position position="508"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004926"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006604"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023152"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00029321"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00473"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU000612"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ71000.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="545" mass="59163" checksum="7BBC318ED7F0C89E" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7A9V9</accession>
    <name>A0A0M7A9V9_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">HTH luxR-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_02500</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000008">
        <property type="protein sequence ID" value="CTQ70414.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672082.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000008.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02500"/>
    <dbReference type="EnsemblBacteria" id="CTQ70414">
        <property type="protein sequence ID" value="CTQ70414"/>
        <property type="gene ID" value="LAX5112_02500"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016032">
        <property type="entry name" value="Sig_transdc_resp-reg_C-effctor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000792">
        <property type="entry name" value="Tscrpt_reg_LuxR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="SMART" id="SM00421">
        <property type="entry name" value="HTH_LUXR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46894">
        <property type="entry name" value="SSF46894"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH luxR-type" evidence="3">
        <location>
            <begin position="320"/>
            <end position="377"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="247"/>
            <end position="270"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="251"/>
            <end position="270"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00421"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ70414.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="384" mass="41631" checksum="3C822B5CCC96480A" modified="2015-12-09" version="1">MPNLRKDAELDLLEDALGKITTHTDWLPFLDKVSGLFDCYACAAEYLDDGFATGRFTGPAHAEAFRDFLSSASYHAGVTAFKYLLELAEPDAVYVVHQGHISKLDAPGISLTSGNEVSSQSAIISITRNSSGLTMIFGLLFDDASPVETTSAETVLAFSKVAKILETCFGAITNIDMLKRQSRIQRAFANHCAVPSVLINRQRRVMAEHENGLSVLADLDVGLVAGGKLQIRNRELEMLLADLPSAPTSAKAPHKTGQNPAAKSDSSLSRSGFCLRDRSGNLNRVTIEAVSGDTHDPWVLLRVCQPANIPEAVETILQEELGLSLSEAHLARSLAETGSVSATTALLNITRNTMKTHLRRIFDKTAVRTQLELVQLVYRLSGLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AAR5</accession>
    <name>A0A0M7AAR5_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">tRNA threonylcarbamoyladenosine biosynthesis protein TsaE</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaE</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">LAX5112_02916</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the TsaE family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71711.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672416.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02916"/>
    <dbReference type="EnsemblBacteria" id="CTQ71711">
        <property type="protein sequence ID" value="CTQ71711"/>
        <property type="gene ID" value="LAX5112_02916"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0002949">
        <property type="term" value="P:tRNA threonylcarbamoyladenosine modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002575">
        <property type="entry name" value="Aminoglycoside_PTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012180">
        <property type="entry name" value="Bifunc_ATPase/PTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003442">
        <property type="entry name" value="T6A_TsaE"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01636">
        <property type="entry name" value="APH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02367">
        <property type="entry name" value="TsaE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF036599">
        <property type="entry name" value="AtpPhos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="SSF56112"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00150">
        <property type="entry name" value="T6A_YjeE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="APH" evidence="5">
        <location>
            <begin position="184"/>
            <end position="431"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007599"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00019010"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00032441"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF01636"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ71711.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="510" mass="57127" checksum="16EA1A9618DC5417" modified="2015-12-09" version="1">MASHQLRDLTATFLSLSLKDESDTLQLAEDLAAILKPGDLLCLSGDLGAGKSTFSRALIRNMAGDSDLEVPSPTFTLVQPYDLPRLPLAHFDLYRLEEPEEIEELGLEEILEDSAALIEWPEMAKDLLPESALWLQFRHGGDEDTRQVEFYSEDLEWEKRISATLEIRAFLKAALNTGPISREHLAGDASLRTFEKIDAGDEHLALMRWPFSDATLPETIRSYMDEVHLAKDCRAVAAIGGELRKIGLRAPAIKKADFDKGLVLSEFLGSETIVVDGKPVAERYFAAVDVLAAMHARKFPETVNLDTGETYRVPIYSNDALISEASLLLDWYLPEKTGAEASDQIKTEFDALWRGLLDGLSEAQSGWVLRDFHSPNLLWQAGALGTDRIGLIDFQDTVIGPVAYDVASLLLDARTDIDPELENALFDAYLQKRKGLGQEVDREAFKQAYVVMGAQRISKILGIFVRLARRDSKPAYLEHLPRMEGYLDRVMMAPVLSDLKDWYQRHIGRY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AC07</accession>
    <name>A0A0M7AC07_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03077</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72161.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03077"/>
    <dbReference type="EnsemblBacteria" id="CTQ72161">
        <property type="protein sequence ID" value="CTQ72161"/>
        <property type="gene ID" value="LAX5112_03077"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="38"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ72161.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="55" mass="5389" checksum="FE0FD211DF2A53DC" modified="2015-12-09" version="1">MSAGSGQGQKHGSGAANTTAPIAGIGLIILACLCFSVLDATAKYLSASLPTLQIV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="23" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ACK2</accession>
    <name>A0A0M7ACK2_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 5">Glutaminase</fullName>
            <ecNumber evidence="3 5">3.5.1.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 6" type="primary">glsA</name>
        <name evidence="6" type="ORF">LAX5112_02835</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="7" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 5">
            <text>H2O + L-glutamine = L-glutamate + NH4(+)</text>
            <dbReference type="Rhea" id="RHEA:15889"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="EC" id="3.5.1.2"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="5">Homotetramer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the glutaminase family.</text>
    </comment>
    <dbReference type="EC" id="3.5.1.2" evidence="3 5"/>
    <dbReference type="EMBL" id="CXWD01000010">
        <property type="protein sequence ID" value="CTQ71473.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672429.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000010.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_02835"/>
    <dbReference type="EnsemblBacteria" id="CTQ71473">
        <property type="protein sequence ID" value="CTQ71473"/>
        <property type="gene ID" value="LAX5112_02835"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004359">
        <property type="term" value="F:glutaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006541">
        <property type="term" value="P:glutamine metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.710.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00313">
        <property type="entry name" value="Glutaminase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012338">
        <property type="entry name" value="Beta-lactam/transpept-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015868">
        <property type="entry name" value="Glutaminase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12544">
        <property type="entry name" value="PTHR12544"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04960">
        <property type="entry name" value="Glutaminase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56601">
        <property type="entry name" value="SSF56601"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03814">
        <property type="entry name" value="Gln_ase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0007">Acetylation</keyword>
    <keyword evidence="4 5 6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="binding site" evidence="5">
        <location>
            <position position="61"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="111"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="157"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="164"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="188"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="236"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="254"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001062"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00313"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="CTQ71473.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="310" mass="33054" checksum="7DB5E3FAE21B4829" modified="2015-12-09" version="1">MQELLNNIANAALKSEDKGQVATYIPELAKIDPNQFGISIALANGDVFSAGDAHVPFSIQSVSKVFALALALGRVGDQLWQRVGREPSGLSFNSILLLEKEEGIPRNPFINAGALVATDTYLAGSSPREALGELVRFIRAAADDESIHINESVASSELATGHRNFSLAHYLASFGNLRASVDKVLGTYCHQCAVEMTCTQLALAGRFLLEGPDMPKLVSSERRRRINALMMTCGHYDGSGDFAFRVGLPGKSGVGGGILVIAPGRASIAVWSPGLNKYGNSKLGTEAMERIAHETGWSVFGMPQSCSRST</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADK0</accession>
    <name>A0A0M7ADK0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Adenylate cyclase 2</fullName>
            <ecNumber evidence="3">4.6.1.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">cyaB</name>
        <name evidence="3" type="ORF">LAX5112_03211</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="4.6.1.1" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72522.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672644.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000012.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03211"/>
    <dbReference type="EnsemblBacteria" id="CTQ72522">
        <property type="protein sequence ID" value="CTQ72522"/>
        <property type="gene ID" value="LAX5112_03211"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004016">
        <property type="term" value="F:adenylate cyclase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009190">
        <property type="term" value="P:cyclic nucleotide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035556">
        <property type="term" value="P:intracellular signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07302">
        <property type="entry name" value="CHD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1230">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001054">
        <property type="entry name" value="A/G_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007890">
        <property type="entry name" value="CHASE2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05226">
        <property type="entry name" value="CHASE2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00211">
        <property type="entry name" value="Guanylate_cyc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01080">
        <property type="entry name" value="CHASE2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00044">
        <property type="entry name" value="CYCc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50125">
        <property type="entry name" value="GUANYLATE_CYCLASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0456">Lyase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="365"/>
            <end position="387"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="394"/>
            <end position="413"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="425"/>
            <end position="442"/>
        </location>
    </feature>
    <feature type="domain" description="Guanylate cyclase" evidence="2">
        <location>
            <begin position="483"/>
            <end position="621"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ72522.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="739" mass="79037" checksum="048EC3A349A62A10" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ADP8</accession>
    <name>A0A0M7ADP8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Long-chain-fatty-acid--CoA ligase FadD13</fullName>
            <ecNumber evidence="4">6.2.1.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">LAX5112_03279</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="6.2.1.3" evidence="4"/>
    <dbReference type="EMBL" id="CXWD01000013">
        <property type="protein sequence ID" value="CTQ72747.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055672707.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000013.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03279"/>
    <dbReference type="EnsemblBacteria" id="CTQ72747">
        <property type="protein sequence ID" value="CTQ72747"/>
        <property type="gene ID" value="LAX5112_03279"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004467">
        <property type="term" value="F:long-chain fatty acid-CoA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12780">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025110">
        <property type="entry name" value="AMP-bd_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045851">
        <property type="entry name" value="AMP-bd_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020459">
        <property type="entry name" value="AMP-binding"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020845">
        <property type="entry name" value="AMP-binding_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000873">
        <property type="entry name" value="AMP-dep_Synth/Lig"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042099">
        <property type="entry name" value="ANL_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00501">
        <property type="entry name" value="AMP-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13193">
        <property type="entry name" value="AMP-binding_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00154">
        <property type="entry name" value="AMPBINDING"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00455">
        <property type="entry name" value="AMP_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0007">Acetylation</keyword>
    <keyword evidence="4" id="KW-0436">Ligase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AMP-binding" evidence="2">
        <location>
            <begin position="8"/>
            <end position="409"/>
        </location>
    </feature>
    <feature type="domain" description="AMP-binding_C" evidence="3">
        <location>
            <begin position="418"/>
            <end position="493"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022990"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF13193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ72747.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="511" mass="55320" checksum="A15AF6A6DDDA60DB" modified="2015-12-09" version="1">MNPAEWLKRTAAKSPEAPALFTGVRQVADYAAFAETAGAIARALQGRGVAKGDRVAVFTANSTAYLEALYGIWWAGAAAVPINAKLHGREAAWMVEDAGAKLVFCDEKSANALSGLLSGDAQILVTSSAAFDAMRSEAPLSEPVPLDEDDLAWLFYTSGTTGRPKGVMITCGNIASMTYNFFVDVDEVKSGGAILYAAPMSHGAGLYNFMHVLRGARHVVPESGGFDAEEVLRIAPNLKCVSMFAAPTMVRRMVDVAKAQGLNGMGLRTIVYAGGPMYEADILEAVEVMGTRFVQIYGQGECPMGITALSRADVSDRSHPRWRDRLNSVGTAQSSVRVRVVDENGEDVPAGVVGEIVVRGATVMKGYWQNPAATEDTLRNGWLWTGDMGRLDQDGYLTLQDRSKDVIISGGTNIYPREVEEVLLSHPAVHEVSVIGQEDPEWGEIVVAFVVRLAGQYVEAAELDALCLEQIARFKRPKTYHFVEALPKNNYGKVLKTELRQQLMDGGNEHE</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="25" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFP1</accession>
    <name>A0A0M7AFP1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 14">Crossover junction endodeoxyribonuclease RuvC</fullName>
            <ecNumber evidence="11 14">3.1.21.10</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="13 14">Holliday junction nuclease RuvC</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="12 14">Holliday junction resolvase RuvC</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="14 15" type="primary">ruvC</name>
        <name evidence="15" type="ORF">LAX5112_03187</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="16" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9 14">Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10 14">
            <text>Endonucleolytic cleavage at a junction such as a reciprocal single-stranded crossover between two homologous DNA duplexes (Holliday junction).</text>
            <dbReference type="EC" id="3.1.21.10"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="14">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="14">Binds 1 Mg(2+) ion per subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 14">Belongs to the RuvC family.</text>
    </comment>
    <dbReference type="EC" id="3.1.21.10" evidence="11 14"/>
    <dbReference type="EMBL" id="CXWD01000012">
        <property type="protein sequence ID" value="CTQ72454.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03187"/>
    <dbReference type="EnsemblBacteria" id="CTQ72454">
        <property type="protein sequence ID" value="CTQ72454"/>
        <property type="gene ID" value="LAX5112_03187"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008821">
        <property type="term" value="F:crossover junction endodeoxyribonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd16962">
        <property type="entry name" value="RuvC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00034">
        <property type="entry name" value="RuvC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020563">
        <property type="entry name" value="X-over_junc_endoDNase_Mg_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002176">
        <property type="entry name" value="X-over_junc_endoDNase_RuvC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30194">
        <property type="entry name" value="PTHR30194"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02075">
        <property type="entry name" value="RuvC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00696">
        <property type="entry name" value="RSOLVASERUVC"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00228">
        <property type="entry name" value="ruvC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01321">
        <property type="entry name" value="RUVC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 14" id="KW-0227">DNA damage</keyword>
    <keyword evidence="7 14" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="8 14" id="KW-0234">DNA repair</keyword>
    <keyword evidence="5 14 15" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6 14" id="KW-0460">Magnesium</keyword>
    <keyword evidence="14" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3 14" id="KW-0540">Nuclease</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <feature type="binding site" evidence="14">
        <location>
            <position position="31"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="91"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="163"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="166"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009518"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00014685"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00025073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00029354"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00029488"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00030265"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00030973"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="CTQ72454.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="191" mass="20022" checksum="CE0DA14DB100C3C1" modified="2015-12-09" version="1">MFVSSALTGVNGQVLLPICSMTHAIRLLGIDPGLRRTGWGMIEAAGNRLSFIASGTVTSDNKKSLAERLVELHDGLTAVVRQHNPEEAAVEHTFVNKDAGATLKLGQARGVALLVPSLAGLSVAEYAPNLVKKTVVGTGHAEKEQIRAMVKVLMPRATFNSDDAADALAIAVCHAQHRATTAAQLKARGAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AFS8</accession>
    <name>A0A0M7AFS8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03724</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74005.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74005">
        <property type="protein sequence ID" value="CTQ74005"/>
        <property type="gene ID" value="LAX5112_03724"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ74005.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="94" mass="10036" checksum="EDEE8A8B122D7B5C" modified="2015-12-09" version="1">MFYVTNGDVMPEGIGYGTSPAFQPSLAVPRGDQLAQQAQQINARQSEVVAETVQRQADFSSNRAESLARVAEQIEQRAQTDAGPGVGDVVDITV</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="29" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGF4</accession>
    <name>A0A0M7AGF4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Imidazole glycerol phosphate synthase subunit HisF</fullName>
            <ecNumber evidence="9">4.3.2.10</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">IGP synthase cyclase subunit</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="9">IGP synthase subunit HisF</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="9">ImGP synthase subunit HisF</fullName>
            <shortName evidence="9">IGPS subunit HisF</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9 11" type="primary">hisF</name>
        <name evidence="11" type="ORF">LAX5112_03806</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="12" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8 9">IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 9">
            <text>5-[(5-phospho-1-deoxy-D-ribulos-1-ylimino)methylamino]-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamide + L-glutamine = 5-amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamide + D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate + H(+) + L-glutamate</text>
            <dbReference type="Rhea" id="RHEA:24793"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:58278"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="ChEBI" id="CHEBI:58475"/>
            <dbReference type="ChEBI" id="CHEBI:58525"/>
            <dbReference type="EC" id="4.3.2.10"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 9">Amino-acid biosynthesis; L-histidine biosynthesis; L-histidine from 5-phospho-alpha-D-ribose 1-diphosphate: step 5/9.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4 9">Heterodimer of HisH and HisF.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 9 10">Belongs to the HisA/HisF family.</text>
    </comment>
    <dbReference type="EC" id="4.3.2.10" evidence="9"/>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74235.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673116.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03806"/>
    <dbReference type="EnsemblBacteria" id="CTQ74235">
        <property type="protein sequence ID" value="CTQ74235"/>
        <property type="gene ID" value="LAX5112_03806"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00031">
        <property type="reaction ID" value="UER00010"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000107">
        <property type="term" value="F:imidazoleglycerol-phosphate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000105">
        <property type="term" value="P:histidine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd04731">
        <property type="entry name" value="HisF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01013">
        <property type="entry name" value="HisF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006062">
        <property type="entry name" value="His_biosynth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004651">
        <property type="entry name" value="HisF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011060">
        <property type="entry name" value="RibuloseP-bd_barrel"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00977">
        <property type="entry name" value="His_biosynth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51366">
        <property type="entry name" value="SSF51366"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00735">
        <property type="entry name" value="hisF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 9 10" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 9 10" id="KW-0368">Histidine biosynthesis</keyword>
    <keyword evidence="7 9 11" id="KW-0456">Lyase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" evidence="9">
        <location>
            <position position="12"/>
        </location>
    </feature>
    <feature type="active site" evidence="9">
        <location>
            <position position="131"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000619"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009667"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011152"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00025475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01013"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU003657"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="CTQ74235.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="259" mass="27378" checksum="6F54DA118A7F4B82" modified="2015-12-09" version="1">MTLKSRVIPCLDVKDGRVVKGVNFVDLVDAGDPVEAAKAYDAAGADELCFLDITASHEGRDTIYDVVRRTAEACFMPVTVGGGVRTVEDIRKLLIAGADKVSINTAAVKNPEFVKKAAEKFGAQCIVVSIDAKQVNEPGEPERFEIFTHGGRTPTGIDAIEFAKKVVALGAGELLVTSMDRDGTKSGYNLALTRAIADAVPVPVIASGGVGTLDHMVEGIRDGHATAVLAASIFHFGEYTIHEAKQHMTDAGIAMRLDG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGM9</accession>
    <name>A0A0M7AGM9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Voltage-gated potassium channel</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">LAX5112_03589</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000015">
        <property type="protein sequence ID" value="CTQ73592.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008197159.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000015.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03589"/>
    <dbReference type="EnsemblBacteria" id="CTQ73592">
        <property type="protein sequence ID" value="CTQ73592"/>
        <property type="gene ID" value="LAX5112_03589"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008076">
        <property type="term" value="C:voltage-gated potassium channel complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005249">
        <property type="term" value="F:voltage-gated potassium channel activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013099">
        <property type="entry name" value="K_chnl_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003938">
        <property type="entry name" value="K_chnl_volt-dep_EAG/ELK/ERG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028325">
        <property type="entry name" value="VG_K_chnl"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11537">
        <property type="entry name" value="PTHR11537"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07885">
        <property type="entry name" value="Ion_trans_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01463">
        <property type="entry name" value="EAGCHANLFMLY"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6 9" id="KW-0407">Ion channel</keyword>
    <keyword evidence="4" id="KW-0406">Ion transport</keyword>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="24"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="57"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="90"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="139"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="196"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="domain" description="Ion_trans_2" evidence="8">
        <location>
            <begin position="147"/>
            <end position="220"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023303"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF07885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ73592.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="260" mass="29889" checksum="511C44CF193659E0" modified="2015-12-09" version="1">MAEKSDLQSRLRQLYFGHSYSARIFRYVLLAFDLITIAYFIVSAIADPDRHHHEVDYAIAAVLALDYVARLIAAGSRWRYMASFTSLADVVVVISLIIPAFFENFAFLRVIRMLRLLRSYHLLKELRDTSKWFRRNEEILQSTVNLFVFIFVITAIVFVLEHDRNENINNYLDALYFTVTTLTTTGFGDITMTDTVGRLLTVLIMIFGVALFLRLVQTIFRPSKVNLPCPDCGLSRHDPDAVHCKHCGRTLNIPTEGTWD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="33" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AGU8</accession>
    <name>A0A0M7AGU8_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Zinc import ATP-binding protein ZnuC</fullName>
            <ecNumber evidence="10">3.6.3.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">znuC</name>
        <name evidence="10" type="ORF">LAX5112_03846</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <dbReference type="EC" id="3.6.3.-" evidence="10"/>
    <dbReference type="EMBL" id="CXWD01000017">
        <property type="protein sequence ID" value="CTQ74385.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673161.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000017.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03846"/>
    <dbReference type="EnsemblBacteria" id="CTQ74385">
        <property type="protein sequence ID" value="CTQ74385"/>
        <property type="gene ID" value="LAX5112_03846"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015633">
        <property type="term" value="F:ABC-type zinc transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017882">
        <property type="entry name" value="ZnuC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42734:SF9">
        <property type="entry name" value="PTHR42734:SF9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 7 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="10" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-0406">Ion transport</keyword>
    <keyword evidence="6" id="KW-0472">Membrane</keyword>
    <keyword evidence="2 7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <keyword evidence="4" id="KW-0864">Zinc transport</keyword>
    <feature type="domain" description="ABC transporter" evidence="9">
        <location>
            <begin position="6"/>
            <end position="224"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="262"/>
            <end position="292"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="262"/>
            <end position="281"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="41"/>
            <end position="48"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022906"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ74385.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="292" mass="31170" checksum="260AA13BCF00CFDA" modified="2015-12-09" version="1">MSEAADNLVQLTRAGIQKSGSWLVRGVDLTVSPGEIVTLIGPNGSGKSTTAKMALGIHKPTEGSAVRRHGLSVGYVPQKLSIDWTLPLNVKRFMRLTNPLSDAECMAALERTGAARLVGEEMRTLSGGELQRVMLARAIARSPDLLVLDEPVQGVDYAGEIAIYSLISEIRKTIGCGILMISHDLHVVMAAADQVVCLNGHVCCRGTPSDVSRDQNYHQLFGTRAGGALAVYEHDHDHVHLPDGRVRHSDGTVCDHCPGEHDHTHEAHGISGAEPSEETAPHKRVAGGVADA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AHU4</accession>
    <name>A0A0M7AHU4_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Lactose transport system permease protein LacF</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">lacF_4</name>
        <name evidence="7" type="ORF">LAX5112_03510</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000014">
        <property type="protein sequence ID" value="CTQ73343.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008190360.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000014.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03510"/>
    <dbReference type="EnsemblBacteria" id="CTQ73343">
        <property type="protein sequence ID" value="CTQ73343"/>
        <property type="gene ID" value="LAX5112_03510"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="7"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="69"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="102"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="165"/>
            <end position="188"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="215"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="273"/>
            <end position="294"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="65"/>
            <end position="295"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ73343.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="306" mass="34525" checksum="5FA4A8EE3907CA63" modified="2015-12-09" version="1">MPRSNAHYWFVGPALFLMFVILLLPIGIASIMSFTNYSLGNSGAEFVGLENYEKIFTRSTYEKMFGATFRYVFVVVPLSVGLGLGAALLINSTKRFGDLYKTIYFLPVMAALIAMAIVWEFAFHPTIGIVNSTLERGCGTVLEVWGWYAHGCERGFPLWLTDRDYAIWTVAFIGVWQGFGFNMVLYLAGLTSVPRELYQAAEMDGAKSAWDRFRLVTWPMLGPTTVFVVTISFIRSFQVFDTVEAFYPQGGGPSKSVYVMMFAIYEKAIQQNLMGIGAAITVVFLAFVMFLTLVQRWLVERRVHYT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIC3</accession>
    <name>A0A0M7AIC3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Ribosomal-protein-S5-alanine N-acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03791</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74192.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673105.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03791"/>
    <dbReference type="EnsemblBacteria" id="CTQ74192">
        <property type="protein sequence ID" value="CTQ74192"/>
        <property type="gene ID" value="LAX5112_03791"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13302">
        <property type="entry name" value="Acetyltransf_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="13"/>
            <end position="175"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74192.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="178" mass="19559" checksum="012DF35778F28F8B" modified="2015-12-09" version="1">MLKPDGMPQSPRLRFRLPKLSDAAFYQSLMSDPDYIRFIADRGITSIEAARAYIDEKVLPGFEENEGVGLWIIAEKDSDDPVGLCGLVVRDGLDMPDLGYAFHKDHRGKGYAQEAAKAIIAFARSELGLSQLCAITHPENARSSALLMKIGFQPNGQKSLPKIEGIADYFVADLQSLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AIX0</accession>
    <name>A0A0M7AIX0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">YciI-like protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03986</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the YciI family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74819.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673279.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03986"/>
    <dbReference type="EnsemblBacteria" id="CTQ74819">
        <property type="protein sequence ID" value="CTQ74819"/>
        <property type="gene ID" value="LAX5112_03986"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005545">
        <property type="entry name" value="YCII"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03795">
        <property type="entry name" value="YCII"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="YCII" evidence="2">
        <location>
            <begin position="1"/>
            <end position="87"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007689"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF03795"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ74819.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="96" mass="10390" checksum="72F23E1306A5BE25" modified="2015-12-09" version="1">MLYALICTDKPGALQTRLDNREAHLAFLKGMGDGLKAAGPFLDDDGNMTGSLVVIAAANRDEALAISEEDPYAKAGLFESVEIRPWNWVVKNPENA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJM2</accession>
    <name>A0A0M7AJM2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Cell division ABC transporter subunit FtsX</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_03713</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ73973.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673049.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_03713"/>
    <dbReference type="EnsemblBacteria" id="CTQ73973">
        <property type="protein sequence ID" value="CTQ73973"/>
        <property type="gene ID" value="LAX5112_03713"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004513">
        <property type="entry name" value="ABC_transpt_FtsX"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47755">
        <property type="entry name" value="PTHR47755"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="3" id="KW-0132">Cell division</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="64"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="204"/>
            <end position="230"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="264"/>
            <end position="286"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="315"/>
            <end position="338"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="15"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ73973.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="346" mass="36351" checksum="47F26C570FFA8507" modified="2015-12-09" version="1">MAGSKKQDGKKAPEVSVRPQRQTGRPKKSARKPAPKSKSAPKGDAAKLRPSAAIVPPQSVAGRALTLVVAIMSFLACLTVGAVSIVWDAADAWQNDLVREITIQIRPTEGVDMLREIDKAVALAQEFSGIDNVRALSDSETKALLEPWLGDGLQLDGLPVPRLIQITIADPSLLNLEQLRATIRRNVTGASVDDHSVWTSRLSAMAGTVVAGGFAIMLLVMGSMVLSVVFATQAAMAGNKDVVSVLHFVGAEDTFIAREFQRHFLVLGLKGGVSGGLASIVCFVLLDTMTRQGTGQAGSDQLSALFGSVSVSLPGYFGVFGVVFLVAVLTALTSGLAVKAHLAKVD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJZ5</accession>
    <name>A0A0M7AJZ5_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04062</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ74967.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74967">
        <property type="protein sequence ID" value="CTQ74967"/>
        <property type="gene ID" value="LAX5112_04062"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029045">
        <property type="entry name" value="ClpP/crotonase-like_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52096">
        <property type="entry name" value="SSF52096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="29"/>
            <end position="47"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74967.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="235" mass="26153" checksum="5A0366479B040C05" modified="2015-12-09" version="1">MWKESRTGIESNTPTTYHAVISGIRMGEWSLFGFGLMMASLVFFLMPGRANAVEIERFANHLVLSGEIADYSPGALNRNLVEALLDLAMADDRTSPVYLHLNLPKGGDAAASFRLVDIIRSAQDQGTRVVAQVSAGDTCMSGCTFLFLAADERWMAPEGRLVFHGFTQRNAARPVPVPERYIETYYKLLAAANQTFFEFFKAARIIEDDRKVGFTGQTLFEERAFAGLVTRLLMH</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AJZ9</accession>
    <name>A0A0M7AJZ9_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Putative undecaprenyl-phosphate N-acetylgalactosaminyl 1-phosphate transferase</fullName>
            <ecNumber evidence="7">2.7.8.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">tuaA</name>
        <name evidence="7" type="ORF">LAX5112_04237</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="8" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the NAD(P)-dependent epimerase/dehydratase family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the bacterial sugar transferase family.</text>
    </comment>
    <dbReference type="EC" id="2.7.8.-" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000021">
        <property type="protein sequence ID" value="CTQ75448.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673473.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000021.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04237"/>
    <dbReference type="EnsemblBacteria" id="CTQ75448">
        <property type="protein sequence ID" value="CTQ75448"/>
        <property type="gene ID" value="LAX5112_04237"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000271">
        <property type="term" value="P:polysaccharide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003362">
        <property type="entry name" value="Bact_transf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001509">
        <property type="entry name" value="Epimerase_deHydtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02397">
        <property type="entry name" value="Bac_transf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01370">
        <property type="entry name" value="Epimerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0270">Exopolysaccharide synthesis</keyword>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0808">Transferase</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="236"/>
            <end position="257"/>
        </location>
    </feature>
    <feature type="domain" description="Epimerase" evidence="5">
        <location>
            <begin position="17"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="domain" description="Bac_transf" evidence="6">
        <location>
            <begin position="232"/>
            <end position="402"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007637"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF01370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF02397"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="CTQ75448.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="415" mass="44786" checksum="7A197B11E7EA06C2" modified="2015-12-09" version="1">MRPRTVGGRKGKDVKHVITGASGFIGRQLLKRLTAEGHQVVAIGRTPPIENSADPQVSFAGYDDLPEVASGADCFLNLAAVNNDADTSEETFFKVNAELPQQLAAQAKAAGVPVFVNFSSFHALPDGPETPYARSKRAGADALEQAADQNALNLYLPAVYGDDFAGKLAILKKLPGFMRTAGFAVVSAIAPVVHVDRIAAFVGQDLTKVASDEPVLLADNKDDNLVYRFGRKLIDLGFALAVILIFWWLLLIVWVLVKTGSAGPGIFAQDRVGKGGKVFTCYKFRTMGKDTRQAGTHEISESAVTPIGAFLRKTKIDELPQVWNILKGELSLVGPRPCLPVQEELVAERTKRGVLEILPGITGFAQIQGIDMSHPVRLARKDAEYIARRGLIFDLKIILGTFIGKGLGDRTAKSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AK91</accession>
    <name>A0A0M7AK91_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Probable branched-chain-amino-acid aminotransferase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ilvE_2</name>
        <name evidence="3" type="ORF">LAX5112_04010</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Acts on leucine, isoleucine and valine.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74862.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673300.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="SMR" id="A0A0M7AK91"/>
    <dbReference type="STRING" id="388408.LAX5112_04010"/>
    <dbReference type="EnsemblBacteria" id="CTQ74862">
        <property type="protein sequence ID" value="CTQ74862"/>
        <property type="gene ID" value="LAX5112_04010"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008483">
        <property type="term" value="F:transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.470.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001544">
        <property type="entry name" value="Aminotrans_IV"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036038">
        <property type="entry name" value="Aminotransferase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043132">
        <property type="entry name" value="BCAT-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043131">
        <property type="entry name" value="BCAT-like_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01063">
        <property type="entry name" value="Aminotran_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56752">
        <property type="entry name" value="SSF56752"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00014472"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ74862.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="311" mass="34200" checksum="D0448642105EA826" modified="2015-12-09" version="1">MSSTVDVRVTISDLSNGAAWMGGRLMPISEAALPVTDWGLIHSDITYDVVPVLDGAFFRLPHYLARFRRSMDELRLDPGLSDEEMEDALQSLVAATGLRKAYVAMVTSRGVNQVPGSRDPRDCKNQFFAWCVPYVHVIRPEIAERGAHVHIAKTVHRISPGSVNPKVKNYHWGDFTKGLFEAKDHGAETVILLDDDGNVTEGPGFNVFAVKGRTLVTAESGVLEGISRQTVLDIAAEQGLEIEIRALALSEFFESDEVFITTSGGGVAPVTRVDDRIFSNDAPGPITTALHKAYFEWAARPENRTEISYRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AK97</accession>
    <name>A0A0M7AK97_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_03795</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000016">
        <property type="protein sequence ID" value="CTQ74203.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673108.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000016.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74203">
        <property type="protein sequence ID" value="CTQ74203"/>
        <property type="gene ID" value="LAX5112_03795"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ74203.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="424" mass="47257" checksum="9E1E3E2FF9C8B465" modified="2015-12-09" version="1">MAMMENLAGQQKQLALDEKPERTLPPTYASYDWISEGLAERSGENAIIYAYWDQPFGCKVQRQNREPEDFLPDWPVLDAPDYGRKAELKSVLSHHPKTLGTGITAGPGVDKAFQDYIATLPLSLTRLAAPFGPQQWLLLDLFRRAPGLWRKVHQQTGLGRLGTLSLTLELFCAAGRTRPQQRQQLATALNETTREVVLTRYLGQTPEPSLLALLEQVPPGSGILEHRALKAALNQKSETQDLKDLVRMKDEMTDRILKQTDWPETLQIRVLLDQGLSFARILHIVQSGLRNLTEAERAGALKALKLIASPQKLQWWLAHWTMLAGRSREIPPPPIPATSLLSPLQTLSAIEEENRRMRNGIARYVPDVLAGDLYFYHWDGHPAATLCLAVSGNGDWTLLEALGEDGVPIHEEALAEIMSAVQAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKF0</accession>
    <name>A0A0M7AKF0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Haloacetate dehalogenase H-1</fullName>
            <ecNumber evidence="2">3.8.1.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">dehH1_2</name>
        <name evidence="2" type="ORF">LAX5112_03942</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.8.1.3" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74700.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673248.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74700">
        <property type="protein sequence ID" value="CTQ74700"/>
        <property type="gene ID" value="LAX5112_03942"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018785">
        <property type="term" value="F:haloacetate dehalogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000073">
        <property type="entry name" value="AB_hydrolase_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000639">
        <property type="entry name" value="Epox_hydrolase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12697">
        <property type="entry name" value="Abhydrolase_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00111">
        <property type="entry name" value="ABHYDROLASE"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00412">
        <property type="entry name" value="EPOXHYDRLASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AB hydrolase-1" evidence="1">
        <location>
            <begin position="27"/>
            <end position="262"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12697"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74700.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="275" mass="31073" checksum="81FD6DE65F8ECDC8" modified="2015-12-09" version="1">MTWQTPETFNFEGHTIRWGAVGDGVPLILMHGTPFWSYEWSRLAPLLATERKVYFYDMLGYGNSDRPDADVSLGIQNRLFAALVGHWKVERPDVVAHDFGGATALRAHLIDGVDYNSLTLIDPVAVRPWGSPLVQHVKHHEAAFAGMPGYMHEAILPAYLQSAMKKTATAETLAPYAEQWTGAEKQASFYRQIAQMDQRYTDEVQDQYSMIRCPTQILWGEDDEWIPIERGQELHNLIPGSRFVTVQGAGHLMQEDTPEAIVHFVQSFLKSEGRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKM4</accession>
    <name>A0A0M7AKM4_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Purine nucleoside phosphorylase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">yfiH</name>
        <name evidence="10" type="ORF">LAX5112_04146</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="11" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>adenosine + H(+) + H2O = inosine + NH4(+)</text>
            <dbReference type="Rhea" id="RHEA:24408"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16335"/>
            <dbReference type="ChEBI" id="CHEBI:17596"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="EC" id="3.5.4.4"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="4">
            <dbReference type="Rhea" id="RHEA:24409"/>
        </physiologicalReaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>adenosine + phosphate = adenine + alpha-D-ribose 1-phosphate</text>
            <dbReference type="Rhea" id="RHEA:27642"/>
            <dbReference type="ChEBI" id="CHEBI:16335"/>
            <dbReference type="ChEBI" id="CHEBI:16708"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57720"/>
            <dbReference type="EC" id="2.4.2.1"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="2">
            <dbReference type="Rhea" id="RHEA:27643"/>
        </physiologicalReaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>inosine + phosphate = alpha-D-ribose 1-phosphate + hypoxanthine</text>
            <dbReference type="Rhea" id="RHEA:27646"/>
            <dbReference type="ChEBI" id="CHEBI:17368"/>
            <dbReference type="ChEBI" id="CHEBI:17596"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57720"/>
            <dbReference type="EC" id="2.4.2.1"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="1">
            <dbReference type="Rhea" id="RHEA:27647"/>
        </physiologicalReaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>phosphate + S-methyl-5'-thioadenosine = adenine + S-methyl-5-thio-alpha-D-ribose 1-phosphate</text>
            <dbReference type="Rhea" id="RHEA:11852"/>
            <dbReference type="ChEBI" id="CHEBI:16708"/>
            <dbReference type="ChEBI" id="CHEBI:17509"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58533"/>
            <dbReference type="EC" id="2.4.2.28"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="3">
            <dbReference type="Rhea" id="RHEA:11853"/>
        </physiologicalReaction>
    </comment>
    <comment type="similarity">
        <text evidence="5 9">Belongs to the purine nucleoside phosphorylase YfiH/LACC1 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000020">
        <property type="protein sequence ID" value="CTQ75207.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673399.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000020.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04146"/>
    <dbReference type="EnsemblBacteria" id="CTQ75207">
        <property type="protein sequence ID" value="CTQ75207"/>
        <property type="gene ID" value="LAX5112_04146"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004000">
        <property type="term" value="F:adenosine deaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017061">
        <property type="term" value="F:S-methyl-5-thioadenosine phosphorylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd16833">
        <property type="entry name" value="YfiH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.140.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003730">
        <property type="entry name" value="Cu_polyphenol_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038371">
        <property type="entry name" value="Cu_polyphenol_OxRdtase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011324">
        <property type="entry name" value="Cytotoxic_necrot_fac-like_cat"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30616">
        <property type="entry name" value="PTHR30616"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02578">
        <property type="entry name" value="Cu-oxidase_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64438">
        <property type="entry name" value="SSF64438"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00726">
        <property type="entry name" value="TIGR00726"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <keyword evidence="8" id="KW-0862">Zinc</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00001292"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00001600"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00007353"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU361274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="CTQ75207.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="255" mass="27970" checksum="BE76105CBAC3CE49" modified="2015-12-09" version="1">MKIEANELNCNGITHGFFTRNGGVSGGLYESLNIGLGSDDKQPLVLENRKRVAKMFGISPEHLVSPYQIHSPDVITVEGPWADGADRKADALVTKTPNVALGVATADCGPILFADPEAKVVGAAHSGWKGAISGVMENTVEAMEKLGANKHNIRAVLGPTISQNSYEVGQEFFERFADMSQANERYFIPSSRAEHYMFDLPVFITNRLKDLGLAKVASIDVCTYVDENRFFSYRRTTHRKEPDYGRQISAIMIGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-05-25" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AKW6</accession>
    <name>A0A0M7AKW6_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Polyketide cyclase / dehydrase and lipid transport</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_04349</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ribosome association toxin RatA family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75758.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ75758">
        <property type="protein sequence ID" value="CTQ75758"/>
        <property type="gene ID" value="LAX5112_04349"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.530.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005031">
        <property type="entry name" value="COQ10_START"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023393">
        <property type="entry name" value="START-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03364">
        <property type="entry name" value="Polyketide_cyc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Polyketide_cyc" evidence="2">
        <location>
            <begin position="36"/>
            <end position="131"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF03364"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ75758.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="172" mass="19084" checksum="D2528D66CBA054BC" modified="2015-12-09" version="1">MITLLKIGGGVLLVLAGVLLVLSFTGKKTFRTEVFIPVPPEAVWDVLMDTASYPDWNPTFIQVQGEYKEGVKVTNTVKTPDGTMTINASVQVVIPKAELRQAGGLPGVITFDHRWLLRPENGGTCVIQHEIDRGFYLWFWNSDWVQPAYERASLALKHRVSGTGEPTGCRDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AL15</accession>
    <name>A0A0M7AL15_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Neu5Ac permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">siaT_23</name>
        <name evidence="5" type="ORF">LAX5112_04287</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <dbReference type="EMBL" id="CXWD01000022">
        <property type="protein sequence ID" value="CTQ75569.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673520.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000022.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04287"/>
    <dbReference type="EnsemblBacteria" id="CTQ75569">
        <property type="protein sequence ID" value="CTQ75569"/>
        <property type="gene ID" value="LAX5112_04287"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010656">
        <property type="entry name" value="DctM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004681">
        <property type="entry name" value="TRAP_DctM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33362">
        <property type="entry name" value="PTHR33362"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06808">
        <property type="entry name" value="DctM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006066">
        <property type="entry name" value="HI0050"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00786">
        <property type="entry name" value="dctM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="6"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="139"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="173"/>
            <end position="199"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="220"/>
            <end position="240"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="246"/>
            <end position="262"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="274"/>
            <end position="299"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="319"/>
            <end position="336"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="341"/>
            <end position="358"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="364"/>
            <end position="393"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="405"/>
            <end position="426"/>
        </location>
    </feature>
    <feature type="domain" description="DctM" evidence="4">
        <location>
            <begin position="10"/>
            <end position="422"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF06808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ75569.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="433" mass="45388" checksum="DD1A4F18390E1D32" modified="2015-12-09" version="1">MDIQAVAVLFGTFVLLMVLGVPIAFSIGLAAFATFLLFMSFDQSVYIVAQQVASGLDSFTLLAIPFFILAGNIMNRGGIALRLIELAKVLGGRLPGSLAHCNVLANMMFGSISGSAVASAAAVGGVMSPLQKKEGYDPAYSAAVNIASCPTGLLIPPSATFIVYSLITNGTSIAALFVAGYVPGILMGLCLMLVAGIIAKRRGYPIAPRPSTREVIDKTLGAVLPLGLIIIVMGGIIGGVFTATEASAVAVVYTLFLAVVWYREITWRQLPSIILESAVTTSIVLLMIGCSIAMSKAMAFADIPYAISDILLGLSDNPLVLLLIINIALLIVGTFMDMTPALLIFTPIFLPVVTDLGMDPVHFGVMMTFNLCIGICTPPVGSALFVGCSVGGVKIGDVIKPMLPFYAVLVGLLLVVTYIPQISLFLPQLLLGY</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AL79</accession>
    <name>A0A0M7AL79_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="6 12">Sec translocon accessory complex subunit YajC</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">yajC</name>
        <name evidence="13" type="ORF">LAX5112_04069</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="14" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 12">The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5 12">Part of the SecDF-YidC-YajC translocase complex. The SecDF-YidC-YajC translocase forms a supercomplex with SecYEG, called the holo-translocon (HTL).</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cell inner membrane</location>
            <topology evidence="3">Single-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 12">Belongs to the YajC family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ74980.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_008194273.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04069"/>
    <dbReference type="EnsemblBacteria" id="CTQ74980">
        <property type="protein sequence ID" value="CTQ74980"/>
        <property type="gene ID" value="LAX5112_04069"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015031">
        <property type="term" value="P:protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003849">
        <property type="entry name" value="Preprotein_translocase_YajC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33909">
        <property type="entry name" value="PTHR33909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02699">
        <property type="entry name" value="YajC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01853">
        <property type="entry name" value="YAJCTRNLCASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM01323">
        <property type="entry name" value="YajC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00739">
        <property type="entry name" value="yajC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="12" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="8" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="11 12" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-0653">Protein transport</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="12" id="KW-0811">Translocation</keyword>
    <keyword evidence="9 12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="10 12" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="7 12" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="18"/>
            <end position="37"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002061"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004377"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00006742"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00011718"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00014962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU366028"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="CTQ74980.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="110" mass="12102" checksum="8AECCD3245E17B23" modified="2015-12-09" version="1">MLITPAYAQGAGAAGPDFLMSMLPFVAIFAIMYFLIIRPQRQRMKQHQELVSNLRRGDTVVTTGGLIGKVSKVVDDGEIQLELSEGVKVRVVRSMVQEVRSKTEPVKEGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AM86</accession>
    <name>A0A0M7AM86_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_03947</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000018">
        <property type="protein sequence ID" value="CTQ74714.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_050776006.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000018.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ74714">
        <property type="protein sequence ID" value="CTQ74714"/>
        <property type="gene ID" value="LAX5112_03947"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="68"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="96"/>
            <end position="118"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ74714.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="271" mass="29952" checksum="38BC528B3A1F22B3" modified="2015-12-09" version="1">MGKTARLEYLRRILPLGLAVLGIAGWFYFMTLLSSIMCLVAAAAIYLAPPRPQPASGAIRPVSRPSVLTLDLIGFGFGLFFLPLAVLGLASATGALAALALICLLPASLSLVFFTVAVRQETSWVRFFGNGFEFTQFGLRVRVPYTDLEKVSVKLWHASGAVAWFQSTIGSSGRKKAVLLNGEETTKTLVFRRNDGSTFTISSELIPDLQRVLIGMDRAEVDLPEGISEWQRKKIRRRREKMYRVEEPAPKSEQLDVARIAALIEHARRNA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMH7</accession>
    <name>A0A0M7AMH7_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Desosaminyl transferase EryCIII</fullName>
            <ecNumber evidence="2">2.4.1.278</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">eryCIII</name>
        <name evidence="2" type="ORF">LAX5112_04386</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="2.4.1.278" evidence="2"/>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75857.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673603.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000023.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04386"/>
    <dbReference type="EnsemblBacteria" id="CTQ75857">
        <property type="protein sequence ID" value="CTQ75857"/>
        <property type="gene ID" value="LAX5112_04386"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016758">
        <property type="term" value="F:hexosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008194">
        <property type="term" value="F:UDP-glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030259">
        <property type="term" value="P:lipid glycosylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033072">
        <property type="term" value="P:vancomycin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="CDD" id="cd03784">
        <property type="entry name" value="GT1_Gtf-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004276">
        <property type="entry name" value="GlycoTrans_28_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002213">
        <property type="entry name" value="UDP_glucos_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03033">
        <property type="entry name" value="Glyco_transf_28"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00201">
        <property type="entry name" value="UDPGT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glyco_transf_28" evidence="1">
        <location>
            <begin position="8"/>
            <end position="94"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ75857.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="435" mass="46927" checksum="0459A4007247F4F2" modified="2015-12-09" version="1">MSALKPKILIATLGTRGDVQPYVALAGELVRLGADVVVATGRGFDTMIGKVGAQPRAVPIDFEALLGDPVTREAMFTFRGKIKVARTTMEDQKKVVRCLWRIGLEEKPDLILFNLKATVMTLVARRLNVPALPTALQPVVTPTGDFPVSLFGLPALGRVGNRLSYLAAHKLMALGLSPMLKPLRAEATAEFEHPGEMIDGHMPDRSKALCLQGFSSALVPRPKDWPETSWLSGYWFMRPANTYIPDRELMQFLENGPPPVYIGFGSMPSRNPEELTRLIMRALTQTGLRAILARGWGGLTGHALPEVLKDKVFLIDKAPHSWLFPKCSSIIHHGGAGTTHEALRWGKPSLVCPVFADQPFWGQRVHAAGAGPAPISQKKLTTDLLVKALYALDAPAYAMGAKAAAGIMALEPGAEGAAEEIMSVIPAVRASAKSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AML6</accession>
    <name>A0A0M7AML6_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Flagellar protein FliL</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">LAX5112_04093</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="10" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 8">Controls the rotational direction of flagella during chemotaxis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cell inner membrane</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 8">Belongs to the FliL family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000019">
        <property type="protein sequence ID" value="CTQ75033.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451989.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000019.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04093"/>
    <dbReference type="EnsemblBacteria" id="CTQ75033">
        <property type="protein sequence ID" value="CTQ75033"/>
        <property type="gene ID" value="LAX5112_04093"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009425">
        <property type="term" value="C:bacterial-type flagellum basal body"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071973">
        <property type="term" value="P:bacterial-type flagellum-dependent cell motility"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006935">
        <property type="term" value="P:chemotaxis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005503">
        <property type="entry name" value="FliL"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03748">
        <property type="entry name" value="FliL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="9" id="KW-0966">Cell projection</keyword>
    <keyword evidence="8" id="KW-0145">Chemotaxis</keyword>
    <keyword evidence="9" id="KW-0969">Cilium</keyword>
    <keyword evidence="8" id="KW-0283">Flagellar rotation</keyword>
    <keyword evidence="9" id="KW-0282">Flagellum</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="20"/>
            <end position="39"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002254"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008281"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU364125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="CTQ75033.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="165" mass="18032" checksum="F1E43A38D36144BE" modified="2015-12-09" version="1">MSNSLVPYEGPETGDAKSNFLAALILISLIGAGAGAGLAKIVSDMTETAVHGRIRDAQTFSQTLPFSPSTRLQRLEPLVTNLATPPSTWIRVQATLLLEDEPDTDVSVLRKRIEDDFLSFLRTLTLAHLEGGVGLQHLREDLNERAKVRSKGMVREVILESVVIQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMS0</accession>
    <name>A0A0M7AMS0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Carbamoyltransferase HypF</fullName>
            <ecNumber evidence="8">6.2.-.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">hypF</name>
        <name evidence="12" type="ORF">LAX5112_04508</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="13" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Involved in the maturation of [NiFe] hydrogenases. Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases. HypF functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + C-terminal L-cysteinyl-[HypE protein] + carbamoyl phosphate + H2O = AMP + C-terminal S-carboxamide-L-cysteinyl-[HypE protein] + diphosphate + H(+) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:55636"/>
            <dbReference type="Rhea" id="RHEA-COMP:14247"/>
            <dbReference type="Rhea" id="RHEA-COMP:14392"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58228"/>
            <dbReference type="ChEBI" id="CHEBI:76913"/>
            <dbReference type="ChEBI" id="CHEBI:139126"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>an acyl phosphate + H2O = a carboxylate + H(+) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:14965"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29067"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:59918"/>
            <dbReference type="EC" id="3.6.1.7"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 8">Protein modification; [NiFe] hydrogenase maturation.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 8">Belongs to the carbamoyltransferase HypF family.</text>
    </comment>
    <dbReference type="EC" id="6.2.-.-" evidence="8"/>
    <dbReference type="EMBL" id="CXWD01000025">
        <property type="protein sequence ID" value="CTQ76189.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04508"/>
    <dbReference type="EnsemblBacteria" id="CTQ76189">
        <property type="protein sequence ID" value="CTQ76189"/>
        <property type="gene ID" value="LAX5112_04508"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00335"/>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003998">
        <property type="term" value="F:acylphosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016743">
        <property type="term" value="F:carboxyl- or carbamoyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003725">
        <property type="term" value="F:double-stranded RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016874">
        <property type="term" value="F:ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046944">
        <property type="term" value="P:protein carbamoylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001792">
        <property type="entry name" value="Acylphosphatase-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036046">
        <property type="entry name" value="Acylphosphatase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017968">
        <property type="entry name" value="Acylphosphatase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004421">
        <property type="entry name" value="Carbamoyltransferase_HypF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017945">
        <property type="entry name" value="DHBP_synth_RibB-like_a/b_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041440">
        <property type="entry name" value="HypF_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006070">
        <property type="entry name" value="YrdC-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011125">
        <property type="entry name" value="Znf_HypF"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00708">
        <property type="entry name" value="Acylphosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17788">
        <property type="entry name" value="HypF_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01300">
        <property type="entry name" value="Sua5_yciO_yrdC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07503">
        <property type="entry name" value="zf-HYPF"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006256">
        <property type="entry name" value="CMPcnvr_hdrg_mat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54975">
        <property type="entry name" value="SSF54975"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55821">
        <property type="entry name" value="SSF55821"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00143">
        <property type="entry name" value="hypF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00150">
        <property type="entry name" value="ACYLPHOSPHATASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51160">
        <property type="entry name" value="ACYLPHOSPHATASE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51163">
        <property type="entry name" value="YRDC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0436">Ligase</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="12" id="KW-0808">Transferase</keyword>
    <keyword evidence="7" id="KW-0862">Zinc</keyword>
    <keyword evidence="6" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="Acylphosphatase-like" evidence="10">
        <location>
            <begin position="5"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="domain" description="YrdC-like" evidence="11">
        <location>
            <begin position="202"/>
            <end position="391"/>
        </location>
    </feature>
    <feature type="active site" evidence="9">
        <location>
            <position position="20"/>
        </location>
    </feature>
    <feature type="active site" evidence="9">
        <location>
            <position position="38"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004711"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008097"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRNR" id="PIRNR006256"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00520"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51160"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS51163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="CTQ76189.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="773" mass="82580" checksum="FBE2FE189DA8C235" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AMT0</accession>
    <name>A0A0M7AMT0_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Hydrogenase maturation factor HypA</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">hypA</name>
        <name evidence="5" type="ORF">LAX5112_04513</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="6" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the HypA/HybF family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000025">
        <property type="protein sequence ID" value="CTQ76199.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673712.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000025.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04513"/>
    <dbReference type="EnsemblBacteria" id="CTQ76199">
        <property type="protein sequence ID" value="CTQ76199"/>
        <property type="gene ID" value="LAX5112_04513"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016151">
        <property type="term" value="F:nickel cation binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051604">
        <property type="term" value="P:protein maturation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00213">
        <property type="entry name" value="HypA_HybF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000688">
        <property type="entry name" value="HypA/HybF"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34535">
        <property type="entry name" value="PTHR34535"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01155">
        <property type="entry name" value="HypA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004761">
        <property type="entry name" value="Hydrgn_mat_HypA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00100">
        <property type="entry name" value="hypA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="1 4" id="KW-0533">Nickel</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0862">Zinc</keyword>
    <feature type="binding site" evidence="4">
        <location>
            <position position="2"/>
        </location>
        <ligand>
            <name>Ni(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:49786"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="73"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="76"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="89"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="92"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022596"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00213"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="CTQ76199.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="113" mass="12219" checksum="8A61E66C56647EE1" modified="2015-12-09" version="1">MHEMSLCENILGILQDQAASQNFSKVDRVCLEVGPLSGVEPEALRFGFDVVTRGSLADGAQLDIFEPEASAYCAACDTTAAIKDRFDPCPSCGSHLLQIKTGEELRIKELEVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AN58</accession>
    <name>A0A0M7AN58_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">2-hydroxychromene-2-carboxylate isomerase</fullName>
            <ecNumber evidence="1">5.99.1.4</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">nahD_2</name>
        <name evidence="4" type="ORF">LAX5112_04382</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>2-hydroxychromene-2-carboxylate = (3E)-4-(2-hydroxyphenyl)-2-oxobut-3-enoate</text>
            <dbReference type="Rhea" id="RHEA:27401"/>
            <dbReference type="ChEBI" id="CHEBI:59350"/>
            <dbReference type="ChEBI" id="CHEBI:59353"/>
            <dbReference type="EC" id="5.99.1.4"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the GST superfamily. NadH family.</text>
    </comment>
    <dbReference type="EC" id="5.99.1.4" evidence="1"/>
    <dbReference type="EMBL" id="CXWD01000023">
        <property type="protein sequence ID" value="CTQ75846.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673599.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000023.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04382"/>
    <dbReference type="EnsemblBacteria" id="CTQ75846">
        <property type="protein sequence ID" value="CTQ75846"/>
        <property type="gene ID" value="LAX5112_04382"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018845">
        <property type="term" value="F:2-hydroxychromene-2-carboxylate isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001853">
        <property type="entry name" value="DSBA-like_thioredoxin_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014440">
        <property type="entry name" value="HCCAis_GSTk"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01323">
        <property type="entry name" value="DSBA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006386">
        <property type="entry name" value="HCCAis_GSTk"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 4" id="KW-0413">Isomerase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DSBA" evidence="3">
        <location>
            <begin position="3"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="2">
        <location>
            <position position="12"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRNR" id="PIRNR006386"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR006386-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01323"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ75846.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="213" mass="23869" checksum="530645A673F7F348" modified="2015-12-09" version="1">MATIEYVYSAHSAFAYLGSSEVMRICAHHNAVLVHRPVLLSPVVVAQRSPAFRQRTQAHVDYFFGREIERWAEYRSVPIIRKRPTFHDADYSLASGMIIALGETGEDTDRMAHGLLEAHWNEDLDLSDRTALEAVAVKLGFATKELLAEAASQSVQNKLVENSEWAKEKQVFGSPTYIVDGDPFYGQDHLPLVERALEKPFAPSNWINPSVDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ANV1</accession>
    <name>A0A0M7ANV1_9HYPH</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">3'(2'),5'-bisphosphate nucleotidase CysQ</fullName>
            <ecNumber evidence="7">3.1.3.7</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">3'(2'),5-bisphosphonucleoside 3'(2')-phosphohydrolase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">3'-phosphoadenosine 5'-phosphate phosphatase</fullName>
            <shortName evidence="7">PAP phosphatase</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8" type="primary">cysQ_1</name>
        <name evidence="7" type="synonym">cysQ</name>
        <name evidence="8" type="ORF">LAX5112_04514</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="9" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9">CECT 5112</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Converts adenosine-3',5'-bisphosphate (PAP) to AMP.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>adenosine 3',5'-bisphosphate + H2O = AMP + phosphate</text>
            <dbReference type="Rhea" id="RHEA:10040"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58343"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="3.1.3.7"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="7">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cell inner membrane</location>
            <topology evidence="7">Peripheral membrane protein</topology>
            <orientation evidence="7">Cytoplasmic side</orientation>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 7">Belongs to the inositol monophosphatase superfamily. CysQ family.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.7" evidence="7"/>
    <dbReference type="EMBL" id="CXWD01000025">
        <property type="protein sequence ID" value="CTQ76201.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04514"/>
    <dbReference type="EnsemblBacteria" id="CTQ76201">
        <property type="protein sequence ID" value="CTQ76201"/>
        <property type="gene ID" value="LAX5112_04514"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008441">
        <property type="term" value="F:3'(2'),5'-bisphosphate nucleotidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046855">
        <property type="term" value="P:inositol phosphate dephosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046854">
        <property type="term" value="P:phosphatidylinositol phosphate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006790">
        <property type="term" value="P:sulfur compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02095">
        <property type="entry name" value="CysQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006240">
        <property type="entry name" value="CysQ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020583">
        <property type="entry name" value="Inositol_monoP_metal-BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000760">
        <property type="entry name" value="Inositol_monophosphatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020550">
        <property type="entry name" value="Inositol_monophosphatase_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00459">
        <property type="entry name" value="Inositol_P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00377">
        <property type="entry name" value="IMPHPHTASES"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01331">
        <property type="entry name" value="bisphos_cysQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00629">
        <property type="entry name" value="IMP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00630">
        <property type="entry name" value="IMP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 7" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="2 7" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7 8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5 7" id="KW-0460">Magnesium</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="4 7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Substrate binding" evidence="7">
        <location>
            <begin position="96"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="75"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="94"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="96"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="97"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="229"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005289"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022519"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02095"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="CTQ76201.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="281" mass="29705" checksum="92359D0C11FC3910" modified="2015-12-09" version="1">MSELKQMTGTADGQVESLLNLAVAAGAEILTVYAEDFSASVKGDGSPVTVADQAAEDVILKYLANHFPDVPVVAEESVEAGQLPEGGARYFLVDPLDGTKEFVKRNGEFTVNIALIDQGKPVFGVVYAPALKEIYWGGALPGGEAQGAFQGQVTDCEITDVKKISVRKPPEAGLSVLASRSHLSEETEALIAKLNVAEKVCVGSSLKLCWVAAGRADLYPRMAPTMQWDIAAGDAIVRAAGGRVVFAKTGKDFVYKLGEGAVKDDLRNPHFIAVSDLALLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APM3</accession>
    <name>A0A0M7APM3_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Extracytoplasmic solute receptor protein YiaO</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">yiaO_6</name>
        <name evidence="4" type="ORF">LAX5112_04285</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="5" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5">CECT 5112</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the bacterial solute-binding protein 7 family.</text>
    </comment>
    <dbReference type="EMBL" id="CXWD01000022">
        <property type="protein sequence ID" value="CTQ75564.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673519.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000022.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04285"/>
    <dbReference type="EnsemblBacteria" id="CTQ75564">
        <property type="protein sequence ID" value="CTQ75564"/>
        <property type="gene ID" value="LAX5112_04285"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030288">
        <property type="term" value="C:outer membrane-bounded periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071702">
        <property type="term" value="P:organic substance transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.190.170">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018389">
        <property type="entry name" value="DctP_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004682">
        <property type="entry name" value="TRAP_DctP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038404">
        <property type="entry name" value="TRAP_DctP_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33376">
        <property type="entry name" value="PTHR33376"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03480">
        <property type="entry name" value="DctP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006470">
        <property type="entry name" value="DctB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00787">
        <property type="entry name" value="dctP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0675">Receptor</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5005809827" evidence="3">
        <location>
            <begin position="25"/>
            <end position="327"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="CTQ75564.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="327" mass="35769" checksum="34C4BB10CF7B499D" modified="2015-12-09" version="1">MSKFIKVAALLAAGAVAFGSAANAKTLRLNHNNPEDHPLHKSMEFMADRLEELTNGDLKIRIYANAQLGTQRESMELMQNGALDMARSNASELEAFEESYGALNLPYIFVNDDHYYDVLSGDIGADILKASEDKGFIGVAYYVEGARSFYANKEINSPADLQGMKIRVQPSPSAIRMVELLGGNPTPIAWGELYSALQQGVVDGAENNPLALTSARHGEVSKVYSNDGHTMIPSVVMISTKSWNELSDDHKDALAKAARESMDFHREQWDAMVAEGIETAKNELGVKFIEVDKGPFIEAVLPMHEEAAAKSEKVADLIKRIKAIAPQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7APW2</accession>
    <name>A0A0M7APW2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Glycyl-glycine endopeptidase ALE-1</fullName>
            <ecNumber evidence="3">3.4.24.75</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_04821</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="3.4.24.75" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000032">
        <property type="protein sequence ID" value="CTQ77165.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_040451049.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000032.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04821"/>
    <dbReference type="EnsemblBacteria" id="CTQ77165">
        <property type="protein sequence ID" value="CTQ77165"/>
        <property type="gene ID" value="LAX5112_04821"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.70.70.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011055">
        <property type="entry name" value="Dup_hybrid_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016047">
        <property type="entry name" value="Peptidase_M23"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01551">
        <property type="entry name" value="Peptidase_M23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51261">
        <property type="entry name" value="SSF51261"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidase_M23" evidence="2">
        <location>
            <begin position="519"/>
            <end position="615"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01551"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ77165.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="658" mass="72958" checksum="617F5879E076D02D" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQA1</accession>
    <name>A0A0M7AQA1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04675</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000028">
        <property type="protein sequence ID" value="CTQ76691.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76691">
        <property type="protein sequence ID" value="CTQ76691"/>
        <property type="gene ID" value="LAX5112_04675"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="67"/>
            <end position="90"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76691.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="94" mass="10244" checksum="DF4FE08227FA806E" modified="2015-12-09" version="1">MIVFRFHSKTRSSLVPFIRSPLRRVPDRRGIGPLLEHHRDVRIHGDAVNVALGLVIIAGILEGRAILLGIAIGVNFIVTGGAMIVVANMIEVED</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQC1</accession>
    <name>A0A0M7AQC1_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Bacteriochlorophyll 4-vinyl reductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04878</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000033">
        <property type="protein sequence ID" value="CTQ77335.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04878"/>
    <dbReference type="EnsemblBacteria" id="CTQ77335">
        <property type="protein sequence ID" value="CTQ77335"/>
        <property type="gene ID" value="LAX5112_04878"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030494">
        <property type="term" value="P:bacteriochlorophyll biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015979">
        <property type="term" value="P:photosynthesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010249">
        <property type="entry name" value="BchJ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024096">
        <property type="entry name" value="NO_sig/Golgi_transp_ligand-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004096">
        <property type="entry name" value="V4R"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02830">
        <property type="entry name" value="V4R"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00989">
        <property type="entry name" value="V4R"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF111126">
        <property type="entry name" value="SSF111126"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02019">
        <property type="entry name" value="BchJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="V4R" evidence="1">
        <location>
            <begin position="136"/>
            <end position="197"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77335.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="197" mass="21317" checksum="5078760893106F50" modified="2015-12-09" version="1">MERQSLQADGMIGPNALTQFRSPLEKQGGQDLFETLLQDARIASLPDMSGLIPEGPVARFHKTVRATLPELSAEISRAAGVGTADYVLKHRIPGLAQTLLKVLPASVSKHLLANAISKNAWTFAGSGHFEIAGLTPLIFILKDNPLIAGEHAGRPICHWHVAVFERLFQELIGSHVRVTETDCGACGADACRFEFNI</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQK0</accession>
    <name>A0A0M7AQK0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">LAX5112_04708</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="2" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000028">
        <property type="protein sequence ID" value="CTQ76781.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ76781">
        <property type="protein sequence ID" value="CTQ76781"/>
        <property type="gene ID" value="LAX5112_04708"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="CTQ76781.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="172" mass="18534" checksum="3CCD1CB8615B805B" modified="2015-12-09" version="1">MQHQGNLVVIRIAAAFNQGVPIDFDFASQLVDGLPEKVGQNIGAVAGCIPIRLRVSGCCQPYRQLVLNGSWLRDDADGLVASFKVHRVSAPEFPDGLNVPVHGCLVVRRPVFRAQNKVLRHPAGCKGKGNPAIAKVVNHRPLLGNPCRVVKGKHAAAGADRQVLRDGRNRCT</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AQM2</accession>
    <name>A0A0M7AQM2_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Adenylate cyclase 1</fullName>
            <ecNumber evidence="3">4.6.1.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">cyaA_16</name>
        <name evidence="3" type="ORF">LAX5112_04685</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EC" id="4.6.1.1" evidence="3"/>
    <dbReference type="EMBL" id="CXWD01000028">
        <property type="protein sequence ID" value="CTQ76716.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055673867.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000028.1"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04685"/>
    <dbReference type="EnsemblBacteria" id="CTQ76716">
        <property type="protein sequence ID" value="CTQ76716"/>
        <property type="gene ID" value="LAX5112_04685"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004016">
        <property type="term" value="F:adenylate cyclase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009190">
        <property type="term" value="P:cyclic nucleotide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035556">
        <property type="term" value="P:intracellular signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07302">
        <property type="entry name" value="CHD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1230">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001054">
        <property type="entry name" value="A/G_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00211">
        <property type="entry name" value="Guanylate_cyc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00044">
        <property type="entry name" value="CYCc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50125">
        <property type="entry name" value="GUANYLATE_CYCLASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0456">Lyase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="362"/>
            <end position="380"/>
        </location>
    </feature>
    <feature type="domain" description="Guanylate cyclase" evidence="2">
        <location>
            <begin position="461"/>
            <end position="593"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ76716.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="726" mass="79912" checksum="B6736FF77C577F63" modified="2015-12-09" version="1"> </sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7ARF0</accession>
    <name>A0A0M7ARF0_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Multidrug transporter activation protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">mta_2</name>
        <name evidence="2" type="ORF">LAX5112_04715</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000029">
        <property type="protein sequence ID" value="CTQ76820.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="STRING" id="388408.LAX5112_04715"/>
    <dbReference type="EnsemblBacteria" id="CTQ76820">
        <property type="protein sequence ID" value="CTQ76820"/>
        <property type="gene ID" value="LAX5112_04715"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009061">
        <property type="entry name" value="DNA-bd_dom_put_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000551">
        <property type="entry name" value="MerR-type_HTH_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13411">
        <property type="entry name" value="MerR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00422">
        <property type="entry name" value="HTH_MERR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46955">
        <property type="entry name" value="SSF46955"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50937">
        <property type="entry name" value="HTH_MERR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH merR-type" evidence="1">
        <location>
            <begin position="52"/>
            <end position="116"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50937"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ76820.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="167" mass="18901" checksum="03BDE906C0502FEC" modified="2015-12-09" version="1">MPLVRFKTCHATEENKKIGQETMNKIATNIVVVPDIAGPDTEVPQDDRPLAISEMSEKFGVTLRTLRFYEEKGLLHPVRKGARRFYGARDVSRMRVILQAKKIGLTLVEIRRVIALVEGGTPRQEQFAELQSICLSQQEILLEQKQMLDEQIAEVDQILGAFAQLRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AT72</accession>
    <name>A0A0M7AT72_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="3">His-Xaa-Ser repeat protein HxsA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">LAX5112_05020</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="4" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000041">
        <property type="protein sequence ID" value="CTQ77701.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="RefSeq" id="WP_055674142.1">
        <property type="nucleotide sequence ID" value="NZ_CXWD01000041.1"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77701">
        <property type="protein sequence ID" value="CTQ77701"/>
        <property type="gene ID" value="LAX5112_05020"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.101.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002477">
        <property type="entry name" value="Peptidoglycan-bd-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036365">
        <property type="entry name" value="PGBD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036366">
        <property type="entry name" value="PGBDSf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01471">
        <property type="entry name" value="PG_binding_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47090">
        <property type="entry name" value="SSF47090"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="43"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="domain" description="PG_binding_1" evidence="2">
        <location>
            <begin position="100"/>
            <end position="151"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="CTQ77701.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="155" mass="15000" checksum="94AB98BDEDAE9655" modified="2015-12-09" version="1">MSLSVQMLTPGALLRIAVLGLSLVLLIPSPSLADSFKSGVIGGIGGLAIGGILGGGRGAAVGAIVGGVGGAIVGANDQKRQQRVVRRPAAPVATASPVVSGIQGALAAKGYNPGPVDGQMGSGTAQAISAYQQANGLLVTGQPSQALLDHMRSGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2015-12-09" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A0M7AU99</accession>
    <name>A0A0M7AU99_9HYPH</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">LAX5112_04883</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Roseibium alexandrii</name>
        <dbReference type="NCBI Taxonomy" id="388408"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Hyphomicrobiales</taxon>
            <taxon>Stappiaceae</taxon>
            <taxon>Roseibium</taxon>
        </lineage>
    </organism>
    <reference evidence="3" key="1">
        <citation type="submission" date="2015-07" db="EMBL/GenBank/DDBJ databases">
            <authorList>
                <person name="Rodrigo-Torres Lidia"/>
                <person name="Arahal R.David."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3">CECT 5112</strain>
        </source>
    </reference>
    <dbReference type="EMBL" id="CXWD01000034">
        <property type="protein sequence ID" value="CTQ77363.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EnsemblBacteria" id="CTQ77363">
        <property type="protein sequence ID" value="CTQ77363"/>
        <property type="gene ID" value="LAX5112_04883"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000053235">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="CTQ77363.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000053235"/>
        </source>
    </evidence>
    <sequence length="76" mass="8252" checksum="18618BC86F7677DD" modified="2015-12-09" version="1">MAGHMAGVHGFGGTAPDQFPLPSKGSHAFGDLKRLARDLGRAQDNPHKIRVHALKSVKARLGEFHGAKSSKWERPE</sequence>
</entry>
<copyright>
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms Distributed under the Creative Commons Attribution (CC BY 4.0) License
</copyright>
</uniprot>